BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003937
(785 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 583/785 (74%), Positives = 677/785 (86%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
MET + L SP + Y LQ +LK ++PF GK +HARIIK GLHL VFL N+LMNFYAK
Sbjct: 1 METSSSQILTSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAK 60
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
T I A +VFDEMPVK++ SWN ILS YAK GRL+ A VF MP DSVSWT +IV Y
Sbjct: 61 TGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGY 120
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
N++G+F+NAI MF EMV D V PTQFT+T+VLASC A+ L G+KVHSFVVK GLS +
Sbjct: 121 NQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYI 180
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+V NSLLNMYAK GD + AK VFD M+LK+ SSWN ++S H+ SG +DLA+ QF+QMIER
Sbjct: 181 SVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIER 240
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
DVV+WN+MI+GY+Q+G+D EAL +F+ ML DSS KPDKFTLAS LSACANLE LKLGKQI
Sbjct: 241 DVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQI 300
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA+IIRTEFD G VGNALIS Y+K GGVEIAQKI+EQS IS L+VIAFT LLDGY+K+G
Sbjct: 301 HAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLG 360
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
DI PARRIFDSLR RDVVAWTAM+VGY QNG N+DA+ELFRSM++EGPKPNNYTL+ MLS
Sbjct: 361 DINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLS 420
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
VSSSLASLDHG+QIHASA RSG ASS+SVSNALITMY+K+G+IN AR VFNLIHW+++T+
Sbjct: 421 VSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTI 480
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
+WTSMI+ALAQHGLGEEA+ LFERMLE GIKPDHITYVGVL+ACTH GLVEQG+ YYN+M
Sbjct: 481 TWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLM 540
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+N HKI PTPSH+A M+DL GRAGLLQEA+ FIENMP+EPDV+AWGSLL++C+VHKN++L
Sbjct: 541 QNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVEL 600
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
++AAE+LLLIEP+NSGAYSAL N+YS+CG+WE+AANIRKSMK GVKK QGFSWVQI+N
Sbjct: 601 AEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKN 660
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KVH+FGV+D LHPQRDAIY MAKIW EIK+MGFVPDT SVLHD+EE++KEQ+L HHSEK
Sbjct: 661 KVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEK 720
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAFGLI TPENTTLRIMKNLRVCNDCHSAIKFI KLV REI+VRDATRFHHFK GLCS
Sbjct: 721 LAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCS 780
Query: 781 CRDYW 785
CRDYW
Sbjct: 781 CRDYW 785
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 1162 bits (3006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/747 (72%), Positives = 649/747 (86%)
Query: 39 IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLA 98
++K GL SV+L N+LMN YAKT A +F+EMPVKT SWNTILS YAKQG+L+ A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
+VF+L+P RDSVSWTTIIV YN++GRF++AI++FV+MV+D+VLPTQFT+T+VLASC A
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G GKKVHSFVVK GL CV V NSLLNMYAK GD MAK VFD M+L+N SSWN ++
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
SLH++ GR+DLA AQF+ + ERD+V+WNSMIAG +Q+G+D EAL F+++LKD+SLKPD+
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
F+LAS LSACANLEKL GKQIH YI+RT FDA+G VGNALIS YAK GGVEIA++I+EQ
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
SGIS L+VIAFT LL+GY+K+GDI PAR+IF+SL+D DVVAWTAM+VGY QNGLN DA+E
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
+F++MV EGP+PN++TL+AMLS SSS+ SL+HGKQIHASA+RSGEA S SV NAL TMY+
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYA 420
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
KAG+IN AR+VFNL+ ++TVSWTSMI+ALAQHGLGEEAI+LFE+ML LGIKPDHITYV
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYV 480
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
GVL+ACTHGGLVEQG+ Y+++MKNVHKI PT SH+A MVDL GRAGLLQEAY F+ENMP+
Sbjct: 481 GVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPM 540
Query: 579 EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
EPDV+AWGSLLS+C+V+KN+DL K+AAE+LLLIEP+NSGAYSAL N+YSSCGKW+DAA I
Sbjct: 541 EPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKI 600
Query: 639 RKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDT 698
RK MK GVKK QG SWVQIQNK HVFGVED LHPQ+D IY M KIW EIK+MGF PDT
Sbjct: 601 RKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDT 660
Query: 699 ASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKL 758
SVLHD+E +VK+Q+LR+HSEKLAIAFG+ISTPENTTLRIMKNLRVCNDCH+AIKFI KL
Sbjct: 661 ESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKL 720
Query: 759 VDREIVVRDATRFHHFKKGLCSCRDYW 785
VDREI+VRDATRFHHFK G CSC+DYW
Sbjct: 721 VDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 270/522 (51%), Gaps = 81/522 (15%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P +F ++L S + + +GK VH+ ++K GLH V + NSL+N YAKT + AK V
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD M ++ SWN ++S + GR+DLA F L+ RD VSW ++I N+ G A+
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224
Query: 131 RMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ F +++D L P +F++ S L++C L LS GK++H ++V+T V N+L++M
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284
Query: 190 YAKVGDEMMAKAVFD--GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
YAK G +A+ + + G+ +V ++ +++ ++ G + AR F+ + + DVV W +
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
MI GY QNG + +A+ +F M+ + +P+ FTLA+ LSA +++ L GKQIHA IR+
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGP-RPNSFTLAAMLSASSSVTSLNHGKQIHASAIRS 403
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ VGNAL + YAK G I AR+
Sbjct: 404 GEALSPSVGNALTTMYAKAGS---------------------------------INGARK 430
Query: 368 IFDSLR-DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+F+ LR +RD V+WT+M++ Q+GL ++A+ELF M+ G KP++ T +LS +
Sbjct: 431 VFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACT--- 487
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL---IHWRQETVS-W 482
HG G + R F+L +H T+S +
Sbjct: 488 ---HG-----------------------------GLVEQGRSYFDLMKNVHKIDPTLSHY 515
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
M+ + GL +EA + E M ++PD I + +L++C
Sbjct: 516 ACMVDLFGRAGLLQEAYKFVENM---PMEPDVIAWGSLLSSC 554
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/784 (68%), Positives = 640/784 (81%), Gaps = 4/784 (0%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGL-HLSVFLKNSLMNFYAKT 61
TPNPPS + HLLQS +KSR+PF+G+ +HARIIK GL +L VFL N+L+N Y KT
Sbjct: 5 TPNPPS---HSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKT 61
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
S S A ++FDEMP+KT SWNTILSA+AK G LD A VF+ +P DSVSWTT+IV YN
Sbjct: 62 GSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYN 121
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+G FK+A+ F+ MV + PTQFT T+VLASC A L GKKVHSFVVK G SG V
Sbjct: 122 HLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVP 181
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V NSLLNMYAK GD +MAK VFD MRLK+ S+WN ++S+H+ + DLA A FDQM + D
Sbjct: 182 VANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPD 241
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+WNS+I GY GYD AL F+ MLK SSLKPDKFTL S LSACAN E LKLGKQIH
Sbjct: 242 IVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIH 301
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
A+I+R + D G VGNALIS YAK G VE+A +IVE +G LNVIAFT+LLDGY KIGD
Sbjct: 302 AHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGD 361
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
I PAR IFDSL+ RDVVAWTAM+VGY QNGL DA+ LFR M+REGPKPNNYTL+A+LSV
Sbjct: 362 IDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSV 421
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
SSLASLDHGKQ+HA A+R E SS+SV NALITMYS++G+I AR++FN I ++T++
Sbjct: 422 ISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLT 481
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
WTSMI++LAQHGLG EAI+LFE+ML + +KPDHITYVGVL+ACTH GLVEQG+ Y+N+MK
Sbjct: 482 WTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMK 541
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
NVH I+PT SH+A M+DLLGRAGLL+EAYNFI NMP+EPDVVAWGSLLS+CRVHK +DL
Sbjct: 542 NVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLA 601
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
K+AAEKLLLI+P+NSGAY AL N S+CGKWEDAA +RKSMK VKK QGFSWVQI+NK
Sbjct: 602 KVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNK 661
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
VH+FGVED LHPQRDAIY ++KIW EIK+MGF+PDT SVLHD+E++VKEQ+LRHHSEKL
Sbjct: 662 VHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKL 721
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AIAF LI+TP++TT+RIMKNLRVCNDCHSAI++I LV+REI+VRDATRFHHFK G CSC
Sbjct: 722 AIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSC 781
Query: 782 RDYW 785
+DYW
Sbjct: 782 QDYW 785
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/785 (66%), Positives = 650/785 (82%), Gaps = 3/785 (0%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
ME N P+ EF+AH+LQ++++ ++PF G+ VH +IIK GLHL V+L N+LM FYAK
Sbjct: 1 MEVGNSPT---SSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAK 57
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
T S+ +A VFDEMP+K+ SWNT++S YAKQG +++ + MP+ D VSWT IIV Y
Sbjct: 58 TGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
N+ G F NAI MF +M+ ++V P+QFTV++VL+SC A L G+K+HSFVVK GL CV
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V SLLNMYAK GD ++AK VFD M +KN+S+WN ++SL++ SG+ +LA +QF++M +R
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
D+V+WNSMI+GYSQ GY+ EAL +F+ ML + SLKPD FTLAS LSACANLEKL +GKQI
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HAYI+R E + +G VGNALIS YAK GGVEIA+ IVE + S LN+IAFT+LLDGY K+G
Sbjct: 298 HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLG 357
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
++ PAR IF+ LRDRDVVAWTAM+VGY QNGL DA+ELFR MV EGP+PN+YTL+AMLS
Sbjct: 358 NVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLS 417
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
VSSSL L+HGKQIHASA+++GE+S+ SV+NALI MY+K GNIN A+RVF+L + ++E V
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SWTSMI+ALAQHGLG+EAI LFERML +G+KPDHITYVGVL+ACTH GLVEQG++YYNMM
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
VH+I+PT SH+A M+DL GRAGLLQEAY FIE+MP+EPD +AWGSLL++C++HKN DL
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADL 597
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
K+AAE+LLLI+P NSGAY AL N+YS+CGKWE+AA RK MK GV+K +G SW+ I+N
Sbjct: 598 AKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKN 657
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
+VH FGVED +HPQ+D IY MA+IW+EIK+MGF+PDT SVLHD+EE+VKEQ+L++HSEK
Sbjct: 658 EVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEK 717
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAFGL++TPENT LRIMKNLRVCNDCHSAIKFI KLV REI+VRDATRFHHFK G CS
Sbjct: 718 LAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCS 777
Query: 781 CRDYW 785
CRDYW
Sbjct: 778 CRDYW 782
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/785 (66%), Positives = 650/785 (82%), Gaps = 3/785 (0%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
ME N P+ EF+AH+LQ++++ ++PF G+ VH +IIK GLHL V+L N+LM FYAK
Sbjct: 1 MEVGNSPT---SSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAK 57
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
T S+ +A VFDEMP+K+ SWNT++S YAKQG +++ + MP+ D VSWT IIV Y
Sbjct: 58 TGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGY 117
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
N+ G F NAI MF +M+ ++V P+QFTV++VL+SC A L G+K+HSFVVK GL CV
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V SLLNMYAK GD ++AK VFD M +KN+S+WN ++SL++ SG+ +LA +QF++M +R
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
D+V+WNSMI+GYSQ GY+ EAL +F+ ML + SLKPD FTLAS LSACANLEKL +GKQI
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HAYI+R E + +G VGNALIS YAK GGVEIA+ IVE + S LN+IAFT+LLDGY K+G
Sbjct: 298 HAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLG 357
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
++ PAR IF+ LRDRDVVAWTAM+VGY QNGL DA+ELFR MV EGP+PN+YTL+AMLS
Sbjct: 358 NVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLS 417
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
VSSSL L+HGKQIHASA+++GE+S+ SV+NALI MY+K GNIN A+RVF+L + ++E V
Sbjct: 418 VSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIV 477
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SWTSMI+ALAQHGLG+EAI LFERML +G+KPDHITYVGVL+ACTH GLVEQG++YYNMM
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
VH+I+PT SH+A M+DL GRAGLLQEAY FIE+MP+EPD +AWGSLL++C++HKN DL
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADL 597
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
K+AAE+LLLI+P NSGAY AL N+YS+CGKWE+AA RK MK GV+K +G SW+ I+N
Sbjct: 598 AKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKN 657
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
+VH FGVED +HPQ+D IY MA+IW+EIK+MGF+PDT SVLHD+EE+VKEQ+L++HSEK
Sbjct: 658 EVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEK 717
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAFGL++TPENT LRIMKNLRVCNDCHSAIKFI KLV REI+VRDATRFHHFK G CS
Sbjct: 718 LAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCS 777
Query: 781 CRDYW 785
CRDYW
Sbjct: 778 CRDYW 782
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/786 (66%), Positives = 646/786 (82%), Gaps = 1/786 (0%)
Query: 1 METPNPPSLISPLEFYAHLLQSNL-KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
M+ P P SL + LE +LLQ ++ KS F +LVH R+IK GL SV+L N+LMN Y+
Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYS 60
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
KT +A+K+FDEMP++T SWNT+LSAYAK+G +D +CE F+ +P RDSVSWTT+IV
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVG 120
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y IG++ AIR+ EM+++ + P+QFT+T+VLAS A L GKKVHSF+VK GL G
Sbjct: 121 YKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGN 180
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V+V+NSLLNMYAK GD MMAK VFD M +K++SSWN +++LH+ G++DLA AQF+QM E
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD+VTWNSMI+GY+Q GYD AL MF+ ML+DS L PD+FTLAS LSACANLEKL +G+Q
Sbjct: 241 RDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQ 300
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
IH++I+ T FD +G V NALIS Y++ GGVE A++++EQ G L + FT LLDGYIK+
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
GD+ A+ IFDSL+DRDVVAWTAM+VGYEQ+GL +A+ LFRSMV E +PN+YTL+AML
Sbjct: 361 GDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAML 420
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
SV+SSLASL HGKQIH SA++SGE S+SVSNALITMY+KAG+I +A R F+LI ++T
Sbjct: 421 SVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDT 480
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSWTSMI+ALAQHG EEA++LFE ML G++PDHITYVGV +ACTH GLV QG++Y++M
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
MK+V KI PT SH+A MVDL GRAGLLQEA FIE MP+EPDVV WGSLLSACRV+KN+D
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNID 600
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LGK+AAE+LLL+EP+NSGAYSAL NLYS+CGKWE+AA IRKSMK VKK QGFSW++++
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+KVH FGVED +HPQ++ IY M KIWDEIK+MG+VPDTASVLHD+EE+VKEQ+LRHHSE
Sbjct: 661 HKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 720
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGLISTP+ TTLRIMKNLRVCNDCH+AIKFI KLV REI+VRD TRFHHFK G C
Sbjct: 721 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 780
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 781 SCRDYW 786
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/786 (66%), Positives = 643/786 (81%), Gaps = 1/786 (0%)
Query: 1 METPNPPSLISPLEFYAHLLQSNL-KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
M+ P P SL + LE +LLQ ++ KS F +LVH R+IK GL SV+L N+LMN Y+
Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYS 60
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
KT +A+K+FDEMP++T SWNT+LSAY+K+G +D CE F+ +P RDSVSWTT+IV
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y IG++ AIR+ +MV++ + PTQFT+T+VLAS A + GKKVHSF+VK GL G
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V+V+NSLLNMYAK GD MMAK VFD M ++++SSWN +++LH+ G++DLA AQF+QM E
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD+VTWNSMI+G++Q GYD AL +F+ ML+DS L PD+FTLAS LSACANLEKL +GKQ
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
IH++I+ T FD +G V NALIS Y++ GGVE A++++EQ G L + FT LLDGYIK+
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
GD+ A+ IF SL+DRDVVAWTAM+VGYEQ+G +A+ LFRSMV G +PN+YTL+AML
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
SV+SSLASL HGKQIH SA++SGE S+SVSNALITMY+KAGNI +A R F+LI ++T
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSWTSMI+ALAQHG EEA++LFE ML G++PDHITYVGV +ACTH GLV QG++Y++M
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
MK+V KI PT SH+A MVDL GRAGLLQEA FIE MP+EPDVV WGSLLSACRVHKN+D
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LGK+AAE+LLL+EP+NSGAYSAL NLYS+CGKWE+AA IRKSMK VKK QGFSW++++
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+KVHVFGVED HP+++ IY M KIWDEIK+MG+VPDTASVLHD+EE+VKEQ+LRHHSE
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 720
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGLISTP+ TTLRIMKNLRVCNDCH+AIKFI KLV REI+VRD TRFHHFK G C
Sbjct: 721 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 780
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 781 SCRDYW 786
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/776 (58%), Positives = 595/776 (76%), Gaps = 7/776 (0%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES-----ISYAKKVF 71
A LLQ + NP G+ +HAR +K GL S +L N+L+++YA + A+++F
Sbjct: 27 ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86
Query: 72 DEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
DE+P + + +WN++LS YAK GRL A VF MP RD VSWT ++V N +GRF A
Sbjct: 87 DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEA 146
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
I+MF++MV D + PTQFT+T+VL+SC A G+KVHSFVVK GLS CV V NS+LNM
Sbjct: 147 IKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNM 206
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K GD A+AVF+ M ++VSSWN +VSL H GR+DLA + F+ M +R +V+WN++I
Sbjct: 207 YGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVI 266
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
AGY+QNG + +AL F+ ML S++ PD+FT+ S LSACANL + +GKQ+HAYI+R+
Sbjct: 267 AGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRM 326
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
G V NALIS YAK G VE A+ +++Q+ ++ LNVI+FT LL+GY+K+GD+ AR +F
Sbjct: 327 PYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMF 386
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
D + +RDVVAWTAM+VGYEQNG N +A+ELFR M+R GP+PN+YT++A+LSV +SLA L+
Sbjct: 387 DVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLE 446
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
+GKQIH A+RS + S SVSN+++TMY+++G++ ARRVF+ +HWR+ETV+WTSMIVAL
Sbjct: 447 YGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVAL 506
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQHGLGE+A+ LFE ML +G+KPD IT+VGVL+ACTH G V++G+RY+ +++ H I P
Sbjct: 507 AQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPE 566
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
SH+A MVDLL RAGL EA FI+ MP+EPD +AWGSLLSACRVHKN DL ++AAEKLL
Sbjct: 567 MSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLL 626
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
I+P NSGAYSAL N+YS+CG+W DAA I K K VKK GFSW I N+VHVFG +D
Sbjct: 627 SIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADD 686
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
LHPQRD +Y AK+WD+IK+ GFVPD SVLHDV++++KE+ML HSEKLAIAFGL+S
Sbjct: 687 VLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVS 746
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TPE TTLRIMKNLRVCNDCH+AIKFI K+ DREI++RDATRFHHFK G CSC+DYW
Sbjct: 747 TPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/778 (58%), Positives = 594/778 (76%), Gaps = 6/778 (0%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES----ISYAKK 69
+ YA LLQ + NP G+ +HAR +K GL S +L N+L+++Y +T + A++
Sbjct: 27 DHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARR 86
Query: 70 VFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+FDE+P+ + + +WN++LS +AK GRL A VF MP RD+VSWT ++V N GRF
Sbjct: 87 LFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
AI+ ++M D PTQFT+T+VL+SC + G+KVHSFVVK GL CV V NS+L
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
NMY K GD A VF+ M +++VSSWN +VSL+ H GR+DLA + F+ M +R +V+WN+
Sbjct: 207 NMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNA 266
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
MIAGY+QNG D +AL +F+ ML +SS+ PD+FT+ S LSACANL +++GKQ+HAYI+RT
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT 326
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
E V NALIS YAK G VE A++I++QS + LNVI+FT LL+GY+KIGD+ AR
Sbjct: 327 EMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F + +RDVVAWTAM+VGYEQNG N +A++LFRSM+ GP+PN+YTL+A+LSV +SLA
Sbjct: 387 MFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLAC 446
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
LD+GKQIH A+RS S SVSNA+ITMY+++G+ ARR+F+ + WR+ET++WTSMIV
Sbjct: 447 LDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
ALAQHG GEEA+ LFE ML G++PD ITYVGVL+AC+H G V +G+RYY+ +KN H+I
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P SH+A MVDLL RAGL EA FI MP+EPD +AWGSLLSACRVHKN +L ++AAEK
Sbjct: 567 PEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL I+P+NSGAYSA+ N+YS+CG+W DAA I K+ K V+K GFSW I++K+HVFG
Sbjct: 627 LLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
+D +HPQRDA+Y A++W+EIK GFVPD SVLHDV++++KE++L HSEKLAIAFGL
Sbjct: 687 DDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGL 746
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ISTPE TTLR+MKNLRVCNDCH+AIK I K+ DREI+VRDATRFHHF+ GLCSC+DYW
Sbjct: 747 ISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/778 (58%), Positives = 598/778 (76%), Gaps = 6/778 (0%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE----SISYAKK 69
+ +A LLQ + + NP G+ +HA +K GL +S +L N+L+++YA+ A++
Sbjct: 26 DHFARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARR 85
Query: 70 VFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+FD++P + +WN++LS YAK GRL A VF MP RD+VSWT ++V N GRF
Sbjct: 86 LFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFW 145
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+A++ F++MV + + P+QF +T+VL+SC A G+KVHSFV+K GLS CV V NS+L
Sbjct: 146 DAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVL 205
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
MY K GD A+AVF+ M++++ SSWN +VSL+ H GR+DLA + F+ M ER +V+WN+
Sbjct: 206 YMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNA 265
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+IAGY+QNG D AL F+ ML SS++PD+FT+ S LSACANL LK+GKQ+H+YI+RT
Sbjct: 266 IIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRT 325
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ + NALIS YAK G VE A++I++++ ++ LNVI+FT LL+GY+K+GD AR
Sbjct: 326 GMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQARE 385
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+FD + +RDV+AWTAM+VGYEQNG N +A+ELFRSM+R GP+PN++TL+A+LS +SLA
Sbjct: 386 VFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAY 445
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L +GKQIH A+RS + S+SVSNA+IT+Y+++G++ ARRVF+ I WR+ETV+WTSMIV
Sbjct: 446 LGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIV 505
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
ALAQHGLGE+AI LFE ML +G+KPD +TY+GV +ACTH G +++G+RYY M N H I
Sbjct: 506 ALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIV 565
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P SH+A MVDLL RAGLL EA+ FI+ MP+ PD V WGSLL+ACRV KN DL ++AAEK
Sbjct: 566 PEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEK 625
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL I+PDNSGAYSAL N+YS+CG+W DAA I K K VKK GFSW +Q+KVHVFG
Sbjct: 626 LLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGA 685
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
+D LHPQRDAI K A++W+EIK+ GFVPD SVLHDV++++KE++L HSEKLAIAFGL
Sbjct: 686 DDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGL 745
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ISTPE TTLRIMKNLRVCNDCH+AIKFI K+VDREI+VRDATRFHHF+ G CSC+DYW
Sbjct: 746 ISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/778 (58%), Positives = 593/778 (76%), Gaps = 6/778 (0%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES----ISYAKK 69
+ YA LLQ + NP G+ +HAR +K GL S +L N+L+++Y +T + A++
Sbjct: 27 DHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARR 86
Query: 70 VFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+FDE+P+ + + +WN++LS +AK GRL A VF MP RD+VSWT ++V N GRF
Sbjct: 87 LFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFG 146
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
AI+ ++M D PTQFT+T+VL+SC + G+KVHSFVVK GL CV V NS+L
Sbjct: 147 EAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVL 206
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
NMY K GD A VF+ M +++VSSWN +VSL+ H GR+DLA + F+ M R +V+WN+
Sbjct: 207 NMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNA 266
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
MIAGY+QNG D +AL +F+ ML +SS+ PD+FT+ S LSACANL +++GKQ+HAYI+RT
Sbjct: 267 MIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRT 326
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
E V NALIS YAK G VE A++I++QS + LNVI+FT LL+GY+KIGD+ AR
Sbjct: 327 EMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F + +RDVVAWTAM+VGYEQNG N +A++LFRSM+ GP+PN+YTL+A+LSV +SLA
Sbjct: 387 MFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLAC 446
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
LD+GKQIH A+RS S SVSNA+ITMY+++G+ ARR+F+ + WR+ET++WTSMIV
Sbjct: 447 LDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
ALAQHG GEEA+ LFE ML G++PD ITYVGVL+AC+H G V +G+RYY+ +KN H+I
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P SH+A MVDLL RAGL EA FI MP+EPD +AWGSLLSACRVHKN +L ++AAEK
Sbjct: 567 PEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL I+P+NSGAYSA+ N+YS+CG+W DAA I K+ K V+K GFSW I++K+HVFG
Sbjct: 627 LLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
+D +HPQRDA+Y A++W+EIK GFVPD SVLHDV++++KE++L HSEKLAIAFGL
Sbjct: 687 DDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGL 746
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ISTPE TTLR+MKNLRVCNDCH+AIK I K+ DREI+VRDATRFHHF+ GLCSC+DYW
Sbjct: 747 ISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/778 (58%), Positives = 595/778 (76%), Gaps = 6/778 (0%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE----SISYAKK 69
+ YA LLQ + NP G+ +HA +K GL +S +L N+L+ +YA A+
Sbjct: 210 DHYARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARC 269
Query: 70 VFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+FD++P + +WN++LS YAK GRL A VF MP+RD+VSWT +IV N GRF
Sbjct: 270 LFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFW 329
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+A++ F++MV + P+QFT+T+VL+SC A+ G+KVH FVVK GLS CV V NS+L
Sbjct: 330 DAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVL 389
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
MY K GD A+AVF+ M++++VSSWNV+VSL+ H GR++LA + F+ M+ER +V+WN+
Sbjct: 390 YMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNT 449
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+IAGY+QNG D AL F+ ML SS++PD FT+ S LSACANL LK+GKQ+H+YI+RT
Sbjct: 450 IIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRT 509
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ + NALIS YAK G VE A++I++Q+ ++ LNVI+FT LL+GY+K+GD AR
Sbjct: 510 GMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQARE 569
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
IFD + +RDV+AWTAM+VGY QNG N +A+ELFRSM+ GP+PN++TL+A+LS +SLA
Sbjct: 570 IFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAY 629
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
LD+GKQIH A+RS + S+SVSNA+IT+Y+++G++ ARRVF+ I WR+ET++WTSMIV
Sbjct: 630 LDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIV 689
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A+AQHGLGE+A+ LFE M+ +G+KPDHITYVGVL+AC H G V++G+RYY M+N H I
Sbjct: 690 AMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIV 749
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P SH+A MVDL RAGLL EA+ FI+ MP+ PD V WGSLL+ACRV KN DL ++AA K
Sbjct: 750 PQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGK 809
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL I+P NSGAYSAL N+YS+CG+W DAA I K K GVKK GFSW ++ KVHVFG
Sbjct: 810 LLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGA 869
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
+D LHPQRD+IY K A++W+EIK+ GFVPD SVLHDV++++KE++L HSEKLAIAFGL
Sbjct: 870 DDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGL 929
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ISTPE TTLRIMKNLRVCNDCH+AIKFI K VDREI+VRDATRFHHF+ G CSC+DYW
Sbjct: 930 ISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/697 (60%), Positives = 543/697 (77%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
+AK GRL A VF MP RD+VSWT ++V N GRF AI+ ++M D PTQFT+
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
T+VL+SC + G+KVHSFVVK GL CV V NS+LNMY K GD A VF+ M +
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++VSSWN +VSL+ H GR+DLA + F+ M +R +V+WN+MIAGY+QNG D +AL +F+ M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L +SS+ PD+FT+ S LSACANL +++GKQ+HAYI+RTE V NALIS YAK G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
VE A++I++QS + LNVI+FT LL+GY+KIGD+ AR +F + +RDVVAWTAM+VGYE
Sbjct: 242 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 301
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QNG N +A++LFRSM+ GP+PN+YTL+A+LSV +SLA LD+GKQIH A+RS S S
Sbjct: 302 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS 361
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
VSNA+ITMY+++G+ ARR+F+ + WR+ET++WTSMIVALAQHG GEEA+ LFE ML
Sbjct: 362 VSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRA 421
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G++PD ITYVGVL+AC+H G V +G+RYY+ +KN H+I P SH+A MVDLL RAGL E
Sbjct: 422 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 481
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI MP+EPD +AWGSLLSACRVHKN +L ++AAEKLL I+P+NSGAYSA+ N+YS+
Sbjct: 482 AQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSA 541
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
CG+W DAA I K+ K V+K GFSW I++K+HVFG +D +HPQRDA+Y A++W+E
Sbjct: 542 CGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEE 601
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IK GFVPD SVLHDV++++KE++L HSEKLAIAFGLISTPE TTLR+MKNLRVCNDC
Sbjct: 602 IKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDC 661
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+AIK I K+ DREI+VRDATRFHHF+ GLCSC+DYW
Sbjct: 662 HAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 267/505 (52%), Gaps = 40/505 (7%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+P +F ++L S ++ VG+ VH+ ++K GL V + NS++N Y K A
Sbjct: 54 FTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETAT 113
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
VF+ MPV+++ SWN ++S GR+DLA +F MP+R VSW +I YN+ G
Sbjct: 114 TVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAK 173
Query: 129 AIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+++F M+ + + P +FT+TSVL++C LG++ GK+VH+++++T ++ VTN+L+
Sbjct: 174 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 233
Query: 188 NMYAKVGDEMMAKAVFD-GMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
+ YAK G A+ + D M NV S+ ++ ++ G ++ AR F M RDVV W
Sbjct: 234 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAW 293
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
+MI GY QNG + EA+ +F +M+ +P+ +TLA+ LS CA+L L GKQIH I
Sbjct: 294 TAMIVGYEQNGRNDEAIDLFRSMIT-CGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAI 352
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R+ + + V NA+I+ YA+ G A
Sbjct: 353 RSLLEQSSSVSNAIITMYARSGSFPW---------------------------------A 379
Query: 366 RRIFDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
RR+FD + R + + WT+M+V Q+G ++AV LF M+R G +P+ T +LS S
Sbjct: 380 RRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 439
Query: 425 LASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
++ GK+ + + A +S ++ + ++AG + A+ + + ++W
Sbjct: 440 AGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWG 499
Query: 484 SMIVALAQHGLGEEAIQLFERMLEL 508
S++ A H E A E++L +
Sbjct: 500 SLLSACRVHKNAELAELAAEKLLSI 524
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 36/301 (11%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S ++P EF +L + N +GK VHA I++ + + + N+L++ YAK+ S+
Sbjct: 185 SSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVEN 244
Query: 67 AKKVFDEMPVKTL--CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
A+++ D+ L S+ +L Y K G ++ A E+F +M NRD V+WT +IV Y + G
Sbjct: 245 ARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNG 304
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
R AI +F M+ P +T+ +VL+ C +L L GK++H +++ L +V+N
Sbjct: 305 RNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN 364
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER-DVV 243
+++ MYA+ SG AR FDQ+ R + +
Sbjct: 365 AIITMYAR-------------------------------SGSFPWARRMFDQVCWRKETI 393
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TW SMI +Q+G EA+G+F ML+ + ++PD+ T LSAC++ + GK+ +
Sbjct: 394 TWTSMIVALAQHGQGEEAVGLFEEMLR-AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ 452
Query: 304 I 304
I
Sbjct: 453 I 453
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/520 (72%), Positives = 453/520 (87%), Gaps = 1/520 (0%)
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
MPVKT SWNTIL+ YAK G L A VF+ +P+RDSVSWTT+IV YN++GRF++AI+MF
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMF 60
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
V M++D+VLPTQFTVT+V ASC ALG L GKK+HSFV+K GLSGCV V NSLLNMYAK
Sbjct: 61 VAMMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKA 120
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
GD +MAK VFD MRL+++SSWN+++SLH+H GR DLA AQF+QM ERDVVTWNSMI GYS
Sbjct: 121 GDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYS 180
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
Q+G+D EAL +F+ ML+DS LKPD+FTLAS LSACAN+E L LGKQIH+YIIRTEFD +G
Sbjct: 181 QHGFDKEALELFSRMLEDS-LKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISG 239
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V NALIS YAK GGVEIAQ IVEQSGIS LNVIAFT LLDGY+K+G+I PAR IFDSL+
Sbjct: 240 VVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLK 299
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D DVVAWTAM+VGY QNGLN DA+ELFR M +EGP+PN++TL+AMLSVSS++ASL+HGKQ
Sbjct: 300 DSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQ 359
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IHASA+RSGE S+SV NALITMY+KAG+I A++VFNLI ++TVSWTSMI+AL QHG
Sbjct: 360 IHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQHG 419
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
LG+E+I+LFE+ML LGIKPDHITYVGVL+ACTH GLVEQG+ Y+N+M ++HKI+PT SH+
Sbjct: 420 LGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHY 479
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
A M+DL GRAGLLQEA++FIENMP+EPDV+AWGSLLS+C+
Sbjct: 480 ACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 264/500 (52%), Gaps = 77/500 (15%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H+ +IK GL V + NSL+N YAK AK VFD M ++++ SWN ++S +
Sbjct: 90 IGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIMISLHM 149
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
GR DLA F M RD V+W ++I Y++ G K A+ +F M++D + P +FT+ S
Sbjct: 150 HGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLAS 209
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD--GMRL 208
+L++C + +L+ GK++HS++++T V N+L++MYAK G +A+++ + G+
Sbjct: 210 ILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISD 269
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
NV ++ ++ ++ G + AR FD + + DVV W +MI GY QNG + +A+ +F M
Sbjct: 270 LNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIM 329
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
K+ +P+ FTLA+ LS +N+ L GKQIHA IR+ + + VGNALI+ YAK G
Sbjct: 330 AKEGP-RPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENLSVSVGNALITMYAKAGS 388
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ AQ++ N+I R++D V+WT+M++
Sbjct: 389 ITDAQQV--------FNLIQ------------------------RNKDTVSWTSMIIALG 416
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q+GL ++++ELF M+ G KP++ T +LS + + ++ G
Sbjct: 417 QHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQG----------------- 459
Query: 449 VSNALITMYSKAGNINAARRVFNL---IHWRQETVS-WTSMIVALAQHGLGEEAIQLFER 504
R FNL IH + T+S + MI + GL +EA E
Sbjct: 460 ------------------RGYFNLMTSIHKIEPTLSHYACMIDLFGRAGLLQEAFSFIEN 501
Query: 505 MLELGIKPDHITYVGVLTAC 524
M I+PD I + +L++C
Sbjct: 502 M---PIEPDVIAWGSLLSSC 518
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 241/449 (53%), Gaps = 48/449 (10%)
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M +K SWN +++ + G L A + FD++ +RD V+W +MI GY+Q G A+ MF
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMF 60
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M+KD L P +FT+ + ++CA L L +GK+IH+++I+ PV N+L++ YAK
Sbjct: 61 VAMMKDKVL-PTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAK 119
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +A+ + ++ + ++ ++ ++ ++ G A F+ + +RDVV W +M+
Sbjct: 120 AGDSVMAKIVFDR--MRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMIT 177
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY Q+G +K+A+ELF M+ + KP+ +TL+++LS +++ +L+ GKQIH+ +R+
Sbjct: 178 GYSQHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDI 237
Query: 446 SLSVSNALITMYSKAG---------------------------------NINAARRVFNL 472
S V NALI+MY+K G NI AR +F+
Sbjct: 238 SGVVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDS 297
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ + V+WT+MIV Q+GL ++A++LF M + G +P+ T +L+ ++ +
Sbjct: 298 LK-DSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNH 356
Query: 533 GQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G++ + + +++ + + + +++ + +AG + +A + D V+W S++ A
Sbjct: 357 GKQIHASAIRSGENLSVSVGN--ALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIA 414
Query: 592 CRVHKNLDLGKIAAEKL-----LLIEPDN 615
H LG+ + E L I+PD+
Sbjct: 415 LGQH---GLGQESIELFEKMLALGIKPDH 440
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 152/292 (52%), Gaps = 39/292 (13%)
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++ T+L GY K+G + A +FD + DRD V+WT M+VGY Q G + A+++F +M+++
Sbjct: 8 SWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDK 67
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P +T++ + + ++L +LD GK+IH+ ++ G + + V+N+L+ MY+KAG+ A+
Sbjct: 68 VLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAK 127
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
VF+ + R + SW MI G + A+ FE+M E D +T+ ++T +
Sbjct: 128 IVFDRMRLRSIS-SWNIMISLHMHGGRADLALAQFEQMSE----RDVVTWNSMITGYSQH 182
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G ++ ++ M L+++ L+PD S
Sbjct: 183 GFDKEALELFSRM-------------------------LEDS--------LKPDRFTLAS 209
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY-SALCNLYSSCGKWEDAANI 638
+LSAC +NL+LGK ++ E D SG +AL ++Y+ G E A +I
Sbjct: 210 ILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSI 261
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 174/363 (47%), Gaps = 58/363 (15%)
Query: 13 LEFYAHLLQSNLKS---------------RNPFVGKLVHARIIKCGLHLSVFLKNSLMNF 57
LE ++ +L+ +LK N +GK +H+ II+ +S ++N+L++
Sbjct: 189 LELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISM 248
Query: 58 YAKTESISYAKKVFDEMPVKTL--CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTT 115
YAKT + A+ + ++ + L ++ +L Y K G + A +F+ + + D V+WT
Sbjct: 249 YAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTA 308
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+IV Y + G +A+ +F M ++ P FT+ ++L+ + + L+ GK++H+ +++G
Sbjct: 309 MIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSG 368
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
+ V+V N+L+ MYAK G A+ VF+
Sbjct: 369 ENLSVSVGNALITMYAKAGSITDAQQVFN------------------------------- 397
Query: 236 QMIER--DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+I+R D V+W SMI Q+G E++ +F ML +KPD T LSAC ++
Sbjct: 398 -LIQRNKDTVSWTSMIIALGQHGLGQESIELFEKMLA-LGIKPDHITYVGVLSACTHVGL 455
Query: 294 LKLGKQIHAYIIRTEFDATGPVGN---ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ G+ + + T P + +I + + G ++ A +E I +VIA+
Sbjct: 456 VEQGRGY--FNLMTSIHKIEPTLSHYACMIDLFGRAGLLQEAFSFIENMPIEP-DVIAWG 512
Query: 351 TLL 353
+LL
Sbjct: 513 SLL 515
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 320/762 (41%), Positives = 477/762 (62%), Gaps = 36/762 (4%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
++RN K +H IIK + FL N+L+N Y+K +I+YA+ VFD+MP SWNT
Sbjct: 17 ETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNT 76
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP- 143
+LSAY+K G L E+F++MPNRD VSW ++I Y G A++ + M++D VL
Sbjct: 77 MLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNL 136
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+ T +++L ++ G + G+++H +VK G V V +SL++MYAK+G +A VF
Sbjct: 137 NRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVF 196
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
D ++ +NV +N +++ + SG + ++ F M ERD ++W +MI G QNG + EA+
Sbjct: 197 DEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMD 256
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F +M + + D++T S L+AC L LK GK+IH IIR+ ++ VG+AL+
Sbjct: 257 LFRDM-RQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV--- 312
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
D Y K + A +F + +++VV+WTAM
Sbjct: 313 ------------------------------DMYCKCRSVRYAEAVFKRMANKNVVSWTAM 342
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
LVGY QNG +++AV +F M R G +P+++TL +++S ++LASL+ G Q H AL SG
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGL 402
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
S ++VSNALIT+Y K G+I + ++F+ + +R E VSWT+++ AQ G E I LFE
Sbjct: 403 ISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDE-VSWTALVSGYAQFGKANETIDLFE 461
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
RML G+KPD +T++ VL+AC+ GLVE+GQ+Y+ M H I P H+ M+DL GRA
Sbjct: 462 RMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRA 521
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L+EA NFI MP PD + W +LLS+CR++ N ++GK AAE LL ++P N Y L
Sbjct: 522 GRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLS 581
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
++Y++ GKW + A +R+ M+ G +K GFSW++ ++KV++F +D P D IY ++
Sbjct: 582 SIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELE 641
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
K+ ++ E G+VPD +SVLHDVE+ K +ML HHSEKLAIAFGL+ P +R++KNLR
Sbjct: 642 KLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLR 701
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCH+A K+I K+ REI+VRDA RFH FK G CSC D+W
Sbjct: 702 VCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/772 (41%), Positives = 483/772 (62%), Gaps = 37/772 (4%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL+ ++ N K +H+ IIK + FL N+L++ YAK SI YA KVFD+MP
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
L SWNTILSAY+K GR+ +F+ MP RD VSW ++I Y G +++ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 136 MVQDQ--VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M+++ + T +++L + G + G+++H VVK G V V + L++MY+K+
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G A+ VFD + KNV +N ++ + GR++ ++ F +M ERD ++W SMI G++
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
QNG D +A+ +F M K +L+ D++T S L+AC + L+ GKQ+HAYIIRT++
Sbjct: 252 QNGLDRDAIDIFREM-KLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKD-- 308
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
N+ + L+D Y K +I A +F +
Sbjct: 309 -------------------------------NIFVASALVDMYCKCKNIKSAEAVFKKMT 337
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++VV+WTAMLVGY QNG +++AV+ F M + G +P+++TL +++S ++LASL+ G Q
Sbjct: 338 CKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQ 397
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
HA AL SG S ++VSNAL+T+Y K G+I + R+FN I ++ E V+WT+++ AQ G
Sbjct: 398 FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDE-VTWTALVSGYAQFG 456
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
E I LFE ML G+KPD +T++GVL+AC+ GLVE+G + + M N H I P H+
Sbjct: 457 KANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHY 516
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
M+DL RAG ++EA NFI MP PD ++W +LLS+CR + N+D+GK AAE L+ ++P
Sbjct: 517 TCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDP 576
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
N+ +Y L ++Y++ GKWE+ A +RK M+ G++K G SW++ +N+VHVF +D +P
Sbjct: 577 HNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNP 636
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
D IY+++ K+ ++ + G+VPD SVLHDV + K +ML HHSEKLAIAFGL+ P
Sbjct: 637 FSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPG 696
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R++KNLRVC+DCH+A K+I K+ +REI+VRD RFH FK G CSC D+W
Sbjct: 697 LPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 328/772 (42%), Positives = 469/772 (60%), Gaps = 36/772 (4%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
+YA LL+ +S+N K +H I+K FL N+L+ Y K +++YA VFD +
Sbjct: 7 YYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHI 66
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P L SWNTILS Y+K G L ++FNLMP RD VSW I Y G +A+R++
Sbjct: 67 PQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYK 126
Query: 135 EMVQDQVLP-TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M++D + + T +++L C+ + G++++ ++K G V V + L++MY K+
Sbjct: 127 LMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKL 186
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G AK FD M +NV N +++ + G ++ ++ F + ERD ++W MI G
Sbjct: 187 GLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLM 246
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
QNG + EAL MF M + + D+FT S L+AC +L L GKQIHAY+IRT+
Sbjct: 247 QNGLEREALDMFREM-RLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV 305
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VG+AL+ D Y K I A +F +
Sbjct: 306 FVGSALV---------------------------------DMYSKCRSIKSAETVFKRMP 332
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++V++WTAMLVGY QNG +++AV++F M R G +P+++TL +++S ++LASL+ G Q
Sbjct: 333 QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
H AL SG S ++VSNALIT+Y K G+ + R+F ++ R E VSWT+++ AQ G
Sbjct: 393 FHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDE-VSWTALLAGYAQFG 451
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
E I LFERML G+KPD +T++GVL+AC+ GLVE+G +Y+ M H I P H
Sbjct: 452 KANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHC 511
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
++DLLGRAG L+EA NFI NMP PDVV W +LLS+CRVH ++++GK AA+ L+ +EP
Sbjct: 512 TCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEP 571
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
N +Y L +LY+S GKW+ A +R+ M+ V+K G+SW++ + KVHVF +D P
Sbjct: 572 QNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSP 631
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
IY ++ K+ ++ E G+VPD +SVLHDVEE K +ML HHSEKLAIAFGLI P
Sbjct: 632 FLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPG 691
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R++KNLRVC DCH+A KFI K+ REI+VRDA RFH FK G CSC D+W
Sbjct: 692 LPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 313/754 (41%), Positives = 471/754 (62%), Gaps = 36/754 (4%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +H IIK + +FL N+L++ YAK + I+YA++VFD+MP + L SWNT+LS+Y+K
Sbjct: 29 KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-TQFTVTSV 151
L VF+ MP RD VSW ++I Y G +++ + M+ + + ++++
Sbjct: 89 ACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTM 148
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + G + G +VH VVK G V V + L++MY+K G A+ FD M KNV
Sbjct: 149 LILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNV 208
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+N +++ + R++ +R F M E+D ++W +MIAG++QNG D EA+ +F M +
Sbjct: 209 VMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREM-RL 267
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+L+ D++T S L+AC + L+ GKQ+HAYIIRT++ VG+AL+
Sbjct: 268 ENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV----------- 316
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D Y K I A +F + ++VV+WTAMLVGY QNG
Sbjct: 317 ----------------------DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNG 354
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+++AV++F M G +P+++TL +++S ++LASL+ G Q H AL SG S ++VSN
Sbjct: 355 YSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSN 414
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+T+Y K G+I + R+F+ + + E VSWT+++ AQ G E ++LFE ML G K
Sbjct: 415 ALVTLYGKCGSIEDSHRLFSEMSYVDE-VSWTALVSGYAQFGKANETLRLFESMLAHGFK 473
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD +T++GVL+AC+ GLV++G + + M H+I P H+ M+DL RAG L+EA
Sbjct: 474 PDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARK 533
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI MP PD + W SLLS+CR H+N+++GK AAE LL +EP N+ +Y L ++Y++ GK
Sbjct: 534 FINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGK 593
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
WE+ AN+RK M+ G++K G SW++ +N+VH+F +D +P D IY+++ K+ ++ +
Sbjct: 594 WEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQ 653
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+VPD SVLHDV++ K +ML HHSEKLAIAFGLI P +R++KNLRVC DCH+A
Sbjct: 654 EGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNA 713
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+I K+ REI+VRDA RFH FK G CSC D+W
Sbjct: 714 TKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 242/437 (55%), Gaps = 5/437 (1%)
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C L KK+H ++K + + + N+L++ YAK A+ VFD M +N+ SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N ++S + L F M RD+V+WNS+I+ Y+ G+ +++ + ML +
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
++ L++ L + + LG Q+H ++++ F + VG+ L+ Y+K G V A++
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
++ + NV+ + TL+ G ++ I +R++F ++++D ++WTAM+ G+ QNGL++
Sbjct: 199 AFDE--MPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A++LFR M E + + YT ++L+ + +L GKQ+HA +R+ ++ V +AL+
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV 316
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY K +I +A VF ++ + VSWT+M+V Q+G EEA+++F M GI+PD
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKN-VVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDD 375
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
T V+++C + +E+G +++ V + + ++V L G+ G +++++
Sbjct: 376 FTLGSVISSCANLASLEEGAQFH-CRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFS 434
Query: 575 NMPLEPDVVAWGSLLSA 591
M D V+W +L+S
Sbjct: 435 EMSY-VDEVSWTALVSG 450
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 226/463 (48%), Gaps = 66/463 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G VH ++K G VF+ + L++ Y+KT + A++ FDEMP K + +NT+++
Sbjct: 160 LGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLM 219
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ R++ + ++F M +DS+SWT +I + + G + AI +F EM + + Q+T S
Sbjct: 220 RCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGS 279
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL +C + L GK+VH+++++T + V ++L++MY K A+ VF M KN
Sbjct: 280 VLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKN 339
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
VV+W +M+ GY QNGY EA+ +F +M +
Sbjct: 340 -------------------------------VVSWTAMLVGYGQNGYSEEAVKIFCDM-Q 367
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
++ ++PD FTL S +S+CANL L+ G Q H + + + V NAL++ Y K G +E
Sbjct: 368 NNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIE 427
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+ ++ S +SY++ +++T L+ GY + G R
Sbjct: 428 DSHRLF--SEMSYVDEVSWTALVSGYAQFGKANETLR----------------------- 462
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
LF SM+ G KP+ T +LS S + G QI S ++ +
Sbjct: 463 --------LFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDH 514
Query: 451 -NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+I ++S+AG + AR+ N + + + + W S++ + H
Sbjct: 515 YTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 317/789 (40%), Positives = 484/789 (61%), Gaps = 24/789 (3%)
Query: 16 YAHLLQSNLKSRNPF---VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
YA LQ NP + + VHA +I G ++ N L++ Y K+ + A +FD
Sbjct: 16 YAAQLQQCC-PHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFD 74
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAI 130
E+ + + T+++A++ G +LA E+F P RD+V + +I Y+ AI
Sbjct: 75 EIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAI 134
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+F +++++ P FT TSVL + + D +++H VVK+G +V N+LL++
Sbjct: 135 ELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSV 194
Query: 190 YAKVGDEMM---------AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+ K + A+ +FD M ++ SW +++ ++ +G LD AR D M E+
Sbjct: 195 FVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEK 254
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
VV WN+MI+GY +G+ EAL MF M ++ D+FT S LSACAN GKQ+
Sbjct: 255 LVVAWNAMISGYVHHGFFLEALEMFRKMYL-LGIQWDEFTYTSVLSACANAGFFLHGKQV 313
Query: 301 HAYIIRTE----FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
HAYI+RTE D + V NAL + Y K G V+ A+++ Q + +++++ +L GY
Sbjct: 314 HAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK--DLVSWNAILSGY 371
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+ G I A+ F+ + +R+++ WT M+ G QNG +++++LF M EG +P +Y +
Sbjct: 372 VNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFA 431
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+ + LA+L HG+Q+HA +R G SSLS NALITMY+K G + AA +F + +
Sbjct: 432 GAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPY- 490
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
++VSW +MI AL QHG G +A++LFE ML+ I PD IT++ VL+ C+H GLVE+G RY
Sbjct: 491 LDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRY 550
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
+ M ++ I P H+A M+DLL RAG EA + IE MP+EP W +LL+ CR+H
Sbjct: 551 FKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHG 610
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
N+DLG AAE+L + P + G Y L N+Y++ G+W+D A +RK M+ GVKK G SW+
Sbjct: 611 NMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWI 670
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
+++NKVHVF V+D +HP+ A+YN + ++ +++++G++PDT VLHD+E + KE +L
Sbjct: 671 EVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLST 730
Query: 717 HSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK 776
HSEKLA+ FGL+ P T+R+ KNLR+C DCH+A KF+ K+V+REIVVRD RFHHFK
Sbjct: 731 HSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKN 790
Query: 777 GLCSCRDYW 785
G CSC +YW
Sbjct: 791 GECSCGNYW 799
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/776 (40%), Positives = 465/776 (59%), Gaps = 36/776 (4%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
S +Y L+ ++RN K +H RII+ + FL N+L+N Y K + A+ V
Sbjct: 3 SSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNV 62
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD +P L SWNT+LSAY+K G L VF+ MPN D VSW +++ Y G ++
Sbjct: 63 FDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESV 122
Query: 131 RMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
R++ M++D V + T +++L + G + G+++H + K G + V + L++M
Sbjct: 123 RVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDM 182
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YAK G A +F+ + KN+ +N +++ + + A FD M E+D ++W ++I
Sbjct: 183 YAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTII 242
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
G +QNG EA+ F M + D+FT S L+AC L GKQIHAYIIRT++
Sbjct: 243 TGLTQNGLFKEAVDKFKEMGIEG-FCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDY 301
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
VG+AL LD Y K ++ A +F
Sbjct: 302 QDNIFVGSAL---------------------------------LDMYCKCRNVKYAEAVF 328
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+R ++V++WTAMLVGY QNG +++AV +F M R P+++TL +++S ++LASL+
Sbjct: 329 RKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLE 388
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G Q H AL SG ++VSNALIT+Y K G++ A ++F+ + R E VSWT+++
Sbjct: 389 EGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDE-VSWTALVSGY 447
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQ G E I LFE ML GI PD +T+VGVL+AC+ GLVE+G Y+ M H+I P
Sbjct: 448 AQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPI 507
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
P H+ M+DLL RAG L+EA NFI MP PD + W +LLS+CR++ NL++GK AAE L
Sbjct: 508 PDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLH 567
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP N +Y L ++Y++ GKW+D A +RK M+ +GVKK G SW++ +NKVH+F +D
Sbjct: 568 KLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADD 627
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
P D IY K+ ++ ++ E G+VPD + VLHDVE+ K +ML HHSEKLAIAFGL+
Sbjct: 628 RSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLF 687
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
P+ +R++KNLRVC DCH+A K+I ++ REI+VRDA RFH FK G+CSC D+W
Sbjct: 688 IPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 317/771 (41%), Positives = 471/771 (61%), Gaps = 20/771 (2%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ + VH +I G L + N L++ Y K+ YA+K+FDE+P + + T+++AY+
Sbjct: 31 LARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYS 90
Query: 91 KQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
G L +A E+FN P RD+V + +I Y+ + +AI +F M P FT
Sbjct: 91 ALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTF 150
Query: 149 TSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM--------- 198
SVL++ T + D ++H VVK G+ V N+LL++Y K +
Sbjct: 151 ASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMAS 210
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ +FD M +N W +++ ++ +G L AR D M E+ + WN+MI+GY +G
Sbjct: 211 ARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLF 270
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF----DATGP 314
+AL +F M + ++ D+ T S +SACA+ LGKQ+HAYI++ E D
Sbjct: 271 EDALTLFRKM-RLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLS 329
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
VGN LI+ Y K G V+ A+KI + + ++I + TLL GY+ G + A+ F + +
Sbjct: 330 VGNTLITLYWKYGKVDGARKIFYEMPVK--DIITWNTLLSGYVNAGRMEEAKSFFAQMPE 387
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
++++ WT M+ G QNG + A++LF M +G +PN+Y + ++ S L +L++G+Q+
Sbjct: 388 KNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQL 447
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA + G S+LSV NA+ITMY++ G + AAR +F + + + VSW SMI AL QHG
Sbjct: 448 HAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAALGQHGH 506
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G +AI+L+E+ML+ GI PD T++ VL+AC+H GLVE+G RY+N M + I P H+A
Sbjct: 507 GVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYA 566
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
M+DL RAG +A N I++MP E W +LL+ CR H N+DLG AAEKL + P
Sbjct: 567 RMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQ 626
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+ G Y L N+Y+S G+W D A RK M+ GVKK SW +++NKVHVF V+D +HP+
Sbjct: 627 HDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPE 686
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+IYN + K+ E+K++G++PDT VLHD+E + KE L HSEKLA+AFGL+ P+
Sbjct: 687 VLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGA 746
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLR+C DCH+AIKF+ K+V REIVVRD RFHHFK G CSCR+YW
Sbjct: 747 TVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 310/798 (38%), Positives = 487/798 (61%), Gaps = 22/798 (2%)
Query: 6 PPSLISPLEFYAHLLQ-SNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P S+ + Y LLQ L+S + + + VHA +I G + N L++ Y+K+
Sbjct: 4 PDSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSK 63
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYN 121
++YA+ +FDE+P + + T+++AY+ G L L+ ++F+ P RDSV + +I Y+
Sbjct: 64 LNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYS 123
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG-KKVHSFVVKTGLSGCV 180
AI +F +M +D P +T TSVL + + + +++H VVK+G
Sbjct: 124 HNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVT 183
Query: 181 NVTNSLLNMYAKVGDE-------MMAKA--VFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+V N+L++ Y K +MA+A +FD M ++ SW +++ ++ + LD A+
Sbjct: 184 SVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAK 243
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
+ ++ V WN+MI+GY+ G EA MF M+ S ++ D+FT S +S CAN
Sbjct: 244 EFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIM-SKIQLDEFTFTSVISVCANA 302
Query: 292 EKLKLGKQIHAYIIRT----EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
+LGK++HAY ++T D PV NALI+ Y K G V+IAQ+I + + +++
Sbjct: 303 GCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNK--MPERDLV 360
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++ +L GY+ + + A+ F+ + ++++++W M+ G Q G ++A++ F M +G
Sbjct: 361 SWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQG 420
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
+P +Y + + S L SL HG+Q+HA +R G SSLS NALITMY++ G ++AA
Sbjct: 421 FEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAH 480
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+F + + +SW +MI AL QHG G +AI+LFE ML+ GI PD I+++ V++AC+H
Sbjct: 481 CLFINMPC-VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHA 539
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV++G++Y++ M NV+ + P H+A ++DLL RAG EA +E+MP EP W +
Sbjct: 540 GLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEA 599
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LL+ CR+H N+DLG AAE+L ++P + G Y L N+Y+ G+W D A +RK M+ GV
Sbjct: 600 LLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGV 659
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
KK G SW++++NKVH F V D HP+ IYN + ++ E++++G+VPDT VLHDVE
Sbjct: 660 KKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVES 719
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
D+KE L HSEKLA+A+G + P T+R+ KNLR+C DCH+A KF+ K+V REIVVRD
Sbjct: 720 DLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRD 779
Query: 768 ATRFHHFKKGLCSCRDYW 785
RFHHF+ G CSC DYW
Sbjct: 780 GKRFHHFRDGKCSCGDYW 797
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/772 (39%), Positives = 468/772 (60%), Gaps = 22/772 (2%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ + VHA +I G N L+ Y K+ ++ YA+++F+E+P + T+++AY
Sbjct: 31 LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYC 90
Query: 91 KQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
G L+L E+FN P RDSV + +I Y G +A+ +F M +D P FT
Sbjct: 91 ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150
Query: 149 TSVLASCTA-LGDLSAGKKVHSFVVKTGLSGCVN--VTNSLLNMYAKVGDEM-------- 197
TSVL++ +G+ ++H VVKTG+ GCV+ V N+LL++Y K E+
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGM-GCVSSSVLNALLSVYVKRASELGIPCSAMV 209
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ +FD M ++ +W +++ ++ + L+ AR F+ M+E WN+MI+GY G
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--- 314
EAL + M + ++ D T + +SACAN+ ++GKQ+HAYI++ E +
Sbjct: 270 FQEALTLCRKM-RFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCL 328
Query: 315 -VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V NALI+ Y K V+ A+KI + N+I + +L GY+ G + A+ F+ +
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSGYVNAGRMEEAKSFFEEMP 386
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++++ T M+ G QNG + ++LF+ M +G +P ++ + L+ S L +L++G+Q
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+HA + G SSLSV NA+I+MY+K G + AA VF + + VSW SMI AL QHG
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVF-VTMPSVDLVSWNSMIAALGQHG 505
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G +AI+LF++ML+ G+ PD IT++ VLTAC+H GLVE+G+ Y+N M + I P H+
Sbjct: 506 HGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHY 565
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
A MVDL RAG+ A I++MP +P W +LL+ CR+H N+DLG AAE+L + P
Sbjct: 566 ARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMP 625
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
N G Y L N+Y+ G+W D A +RK M+ V+K SW++++NKVHVF V+D +HP
Sbjct: 626 QNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHP 685
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ ++Y + ++ E+K++G++PDT VLHD+E + KE L HSEKLA+ FG++ P +
Sbjct: 686 EVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPD 745
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KN+R+C DCH+A KF+ K+ REI+VRD RFHHFK G CSCRDYW
Sbjct: 746 ATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 251/503 (49%), Gaps = 53/503 (10%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++L ++ L S S + VH+ ++ +G + N LL MY K + + A
Sbjct: 8 RLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYA 67
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD--QMIERDVVTWNSMIAGYSQNGY 257
+ +F+ + + + +++ + G L+L R F+ + RD V +N+MI GY+ NG
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD 127
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANL--EKLKLGKQIHAYIIRTEFDA-TGP 314
AL +F M +D +PD FT S LSA + + G Q+H +++T +
Sbjct: 128 GHSALELFRAMRRD-DFRPDDFTFTSVLSALVLFVGNEQQCG-QMHCAVVKTGMGCVSSS 185
Query: 315 VGNALISCYAK--------VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
V NAL+S Y K + A+K+ ++ + + + +TT++ GY++ D+ AR
Sbjct: 186 VLNALLSVYVKRASELGIPCSAMVSARKLFDE--MPKRDELTWTTMITGYVRNDDLNGAR 243
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+F+++ + AW AM+ GY G ++A+ L R M G + ++ T + ++S +++
Sbjct: 244 EVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVG 303
Query: 427 SLDHGKQIHASALRS----GEASSLSVSNALITMYSKAGNINAARRVF------NLIHWR 476
S GKQ+HA L++ + LSVSNALIT+Y K ++ AR++F N+I W
Sbjct: 304 SFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWN 363
Query: 477 ------------------------QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
+ ++ T MI LAQ+G G+E ++LF++M G +P
Sbjct: 364 AILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEP 423
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+ G LTAC+ G +E G++ + + ++ + + S +M+ + + G+++ A +
Sbjct: 424 CDFAFAGALTACSVLGALENGRQLHAQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESV 482
Query: 573 IENMPLEPDVVAWGSLLSACRVH 595
MP D+V+W S+++A H
Sbjct: 483 FVTMP-SVDLVSWNSMIAALGQH 504
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 304/776 (39%), Positives = 471/776 (60%), Gaps = 45/776 (5%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEM 74
YA LL + ++ P V +H I++ H +L N L+ Y K + A++VFD M
Sbjct: 9 YAALLSAAART-EPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAM 67
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P L ++N +LS A L +F M RD VS+ +I ++ G A+R+++
Sbjct: 68 PHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYL 127
Query: 135 EMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
++Q V P++ T+++++ + +ALGD + GK+ H +++ G V + L++MYAK
Sbjct: 128 ALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAK 187
Query: 193 ---VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
VGD AK FD + KNV +N +++ + ++ AR F+ M +RD +TW +M+
Sbjct: 188 MSLVGD---AKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMV 244
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
G++QNG + EAL +F M + + D++T S L+AC L L+ GKQIHAYIIRT +
Sbjct: 245 TGFTQNGLESEALEIFRRM-RFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRY 303
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
D VG+AL+ Y+K +++A+ + + ++ N+I++T L
Sbjct: 304 DDNVFVGSALVDMYSKCRSIKLAETVFRR--MTCKNIISWTAL----------------- 344
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+VGY QNG +++AV +F M R+G P++YTL +++S ++LASL+
Sbjct: 345 --------------IVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLE 390
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G Q H AL SG ++VSNAL+T+Y K G+I A R+F+ + + + VSWT+++
Sbjct: 391 EGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALVSGY 449
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQ G +E I LFE+ML G+KPD +T++GVL+AC+ G VE+G+ Y++ M+ H I P
Sbjct: 450 AQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPI 509
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H+ M+DL R+G L+EA FI+ MP+ PD + WG+LLSACR+ ++++GK AAE LL
Sbjct: 510 DDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLL 569
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
I+P N +Y LC+++++ G+W + A +R+ M+ VKK G SW++ +NKVH+F +D
Sbjct: 570 EIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADD 629
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP IY K+ + ++ E G+ PD +SVLHDV + K M+ HHSEKLAIAFGLI
Sbjct: 630 QSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIF 689
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
P+ +RI+KNLRVC DCH+A KFI K+ R+I+VRDA RFH F G+CSC D+W
Sbjct: 690 VPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 302/754 (40%), Positives = 465/754 (61%), Gaps = 38/754 (5%)
Query: 35 VHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
VHA I++ H S +L N+L+ YA + + +A++VFD MP + L + N++LSA A+ G
Sbjct: 32 VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ--VLPTQFTVTSV 151
+ +F +P RD+VS+ ++ ++ G A +V +++D+ V P++ T++ V
Sbjct: 92 LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +ALGD + G++VH +++ G + L++MYAKVG A+ VFD M KNV
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNV 211
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
N +++ + + ARA F+ + ERD +TW +M+ G +QNG + EAL +F M +
Sbjct: 212 VMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM-RA 270
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ D++T S L+AC L L+ GKQIHAYI RT ++ VG+AL+ Y+K V +
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+ + + + + N+I++T AM+VGY QNG
Sbjct: 331 AEAVFRR--MMWKNIISWT-------------------------------AMIVGYGQNG 357
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++AV +F M R+G KP+++TL +++S ++LASL+ G Q H AL SG ++VSN
Sbjct: 358 CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSN 417
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+T+Y K G+I A R+F+ + + + VSWT++++ AQ G +E I LFE+ML G+K
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVK 476
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD +T++GVL+AC+ GLV++G+ Y++ M+ H I P H+ M+DL R+G L++A
Sbjct: 477 PDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEE 536
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI+ MP PD W +LLSACR+ ++++GK AAE LL ++P N +Y LC++++S G+
Sbjct: 537 FIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGE 596
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W D A +R+ M+ VKK G SW++ +NKVH+F +D HP IY K+ + ++ E
Sbjct: 597 WNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVE 656
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+ PD +SVLHDV + K ML HHSEKLAIAFGLI P +RI+KNLRVC DCH+A
Sbjct: 657 EGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNA 716
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KFI K+ R+I+VRDA RFH F G+CSC D+W
Sbjct: 717 TKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 224/479 (46%), Gaps = 66/479 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH +I++ G F + L++ YAK I A++VFDEM K + NT+++
Sbjct: 163 LGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLL 222
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ + A +F + RDS++WTT++ + G A+ +F M + V Q+T S
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGS 282
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C AL L GK++H+++ +T V V ++L++MY+K +A+AVF M KN
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKN 342
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+++W +MI GY QNG EA+ +F+ M +
Sbjct: 343 -------------------------------IISWTAMIVGYGQNGCGEEAVRVFSEMQR 371
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D +KPD FTL S +S+CANL L+ G Q H + + V NAL++ Y K G +E
Sbjct: 372 D-GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A ++ ++ +S+ + +++T L ++GY Q
Sbjct: 431 DAHRLFDE--MSFHDQVSWTAL-------------------------------VMGYAQF 457
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G K+ ++LF M+ +G KP+ T +LS S +D G+ S + + L
Sbjct: 458 GKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDH 517
Query: 451 -NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+I +YS++G + A + + W +++ A G E E +L+L
Sbjct: 518 YTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKL 576
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 307/792 (38%), Positives = 480/792 (60%), Gaps = 26/792 (3%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L Q N S + + VHA I+ G + F+ N L+N Y K+ +I+YA+K+FD++P
Sbjct: 8 YRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIP 67
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMF 133
+ + T+LSAY+ G + LA ++FN P RD+VS+ +I Y+ A+ +F
Sbjct: 68 KPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLF 127
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
V+M + LP FT +SVL++ + + D + +H V+K G +VTN+LL+ Y
Sbjct: 128 VQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVC 187
Query: 193 VGD-------EMMAKA--VFDGMRLKNV--SSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
++MA A VFD + SW +++ ++ + L AR D +
Sbjct: 188 CASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPI 247
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL-EKLKL---G 297
V WN+MI+GY + G EA F M ++ D++T S +SAC + EK+ + G
Sbjct: 248 DVAWNAMISGYVRRGLYEEAFDTFRRM-HSMGIQEDEYTYTSLISACGSCNEKMGMFNCG 306
Query: 298 KQIHAYIIRTEFDATG----PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
+Q+H YI+RT + + V NALI+ Y K + A+++ ++ + ++I++ +L
Sbjct: 307 RQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR--DIISWNAVL 364
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
GY+ I A IF + +R+V+ WT M+ G QNG ++ ++LF M EG +P +Y
Sbjct: 365 SGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDY 424
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
+ ++ S L SLD+G+QIH+ +R G S LS NALITMYS+ G + +A VF +
Sbjct: 425 AFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTM 484
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ ++VSW +MI ALAQHG G +AI+LFE+M++ I PD IT++ +LTAC H GL+++G
Sbjct: 485 PY-VDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEG 543
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+ Y++ M + I P H+A ++DLL RAG+ +A + I++MP E W +LL+ CR
Sbjct: 544 RHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCR 603
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
+H N++LG AA++LL + P G Y L N+Y++ G+W++ A +R M+ GVKK G
Sbjct: 604 IHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGC 663
Query: 654 SWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM 713
SWV+++N VHVF V+D HP+ A+Y + ++ +E+K++G+VPDT VLHD+E + KE
Sbjct: 664 SWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHS 723
Query: 714 LRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHH 773
L HSEKLA+ +G++ P T+R+ KNLR+C DCH+A K+I K+V+REIVVRD RFHH
Sbjct: 724 LSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHH 783
Query: 774 FKKGLCSCRDYW 785
FK G CSC +YW
Sbjct: 784 FKNGECSCGNYW 795
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/772 (39%), Positives = 467/772 (60%), Gaps = 22/772 (2%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ + VHA +I G N L+ Y K+ ++ YA+++F+E+P + T+++AY
Sbjct: 31 LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYC 90
Query: 91 KQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
G L+L E+FN P RDSV + +I Y G +A+ +F M +D P FT
Sbjct: 91 ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150
Query: 149 TSVLASCTA-LGDLSAGKKVHSFVVKTGLSGCVN--VTNSLLNMYAKVGDEM-------- 197
TSVL++ +G+ ++H VVKTG+ GCV+ V N+LL++Y K E+
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGM-GCVSSSVLNALLSVYVKRASELGISCSAMV 209
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ +FD M ++ +W +++ ++ + L+ AR F+ M+E WN+MI+GY G
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--- 314
EAL + M + ++ D T + +SACAN+ ++GKQ+HAYI++ E +
Sbjct: 270 FQEALTLCRKM-RFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCL 328
Query: 315 -VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V NALI+ Y K V+ A+KI + N+I + +L GY+ G + A+ F+ +
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSGYVNAGRMEEAKSFFEEMP 386
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++++ T M+ G QNG + ++LF+ M +G +P ++ + L+ S L +L++G+Q
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+HA + G SSLSV NA+I+MY+K G + AA VF + + VSW SMI AL QHG
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVF-VTMPSVDLVSWNSMIAALGQHG 505
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G +AI+LF++ML+ G+ PD IT++ VLTAC+H GLVE+G+ Y+N M + I P H+
Sbjct: 506 HGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHY 565
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
A MVDL RAG+ A I++MP +P W +LL+ CR+H N+DLG AAE+L + P
Sbjct: 566 ARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMP 625
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
N G Y L N+Y+ G+W + A +RK M+ V+K SW++++NKVHVF V+D +HP
Sbjct: 626 QNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHP 685
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ ++Y + ++ E+K++G++PDT VLHD+E + KE L HSEKLA+ FG++ P
Sbjct: 686 EVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPG 745
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KN+R+C DCH+A KF+ K+ REI+VRD RFHHFK G CSCRDYW
Sbjct: 746 ATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 251/503 (49%), Gaps = 53/503 (10%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++L ++ L S S + VH+ ++ +G + N LL MY K + + A
Sbjct: 8 RLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYA 67
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD--QMIERDVVTWNSMIAGYSQNGY 257
+ +F+ + + + +++ + G L+L R F+ + RD V +N+MI GY+ NG
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD 127
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANL--EKLKLGKQIHAYIIRTEFDA-TGP 314
AL +F M +D +PD FT S LSA + + G Q+H +++T +
Sbjct: 128 GHSALELFRAMRRD-DFRPDDFTFTSVLSALVLFVGNEQQCG-QMHCAVVKTGMGCVSSS 185
Query: 315 VGNALISCYAK--------VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
V NAL+S Y K + A+K+ ++ + + + +TT++ GY++ D+ AR
Sbjct: 186 VLNALLSVYVKRASELGISCSAMVSARKLFDE--MPKRDELTWTTMITGYVRNDDLNGAR 243
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+F+++ + AW AM+ GY G ++A+ L R M G + ++ T + ++S +++
Sbjct: 244 EVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVG 303
Query: 427 SLDHGKQIHASALRS----GEASSLSVSNALITMYSKAGNINAARRVF------NLIHWR 476
S GKQ+HA L++ + LSVSNALIT+Y K ++ AR++F N+I W
Sbjct: 304 SFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWN 363
Query: 477 ------------------------QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
+ ++ T MI LAQ+G G+E ++LF++M G +P
Sbjct: 364 AILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEP 423
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+ G LTAC+ G +E G++ + + ++ + + S +M+ + + G+++ A +
Sbjct: 424 CDFAFAGALTACSVLGALENGRQLHAQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESV 482
Query: 573 IENMPLEPDVVAWGSLLSACRVH 595
MP D+V+W S+++A H
Sbjct: 483 FVTMP-SVDLVSWNSMIAALGQH 504
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/793 (38%), Positives = 479/793 (60%), Gaps = 16/793 (2%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFV--GKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
PNP + + YA L+ L R + + VH II G + N L++ Y K+
Sbjct: 3 PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKS 62
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVT 119
+ YA+++FDE+ + T++S Y G + LA VF P RD+V + +I
Sbjct: 63 SELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITG 122
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT-ALGDLSAGKKVHSFVVKTGLSG 178
++ +AI +F +M + P FT SVLA + D + H+ +K+G
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGY 182
Query: 179 CVNVTNSLLNMYAKVGDE----MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+V+N+L+++Y++ A+ VFD + K+ SW +++ ++ +G DL +
Sbjct: 183 VTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELL 242
Query: 235 DQMIER-DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
M E +V +N+MI+GY G EAL M M+ S ++ D+FT S + ACAN
Sbjct: 243 KGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVS-SGIELDEFTYPSVIRACANARL 301
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L+LGKQ+HAY++R E D + N+L++ Y K G A+ I E+ + +++++ LL
Sbjct: 302 LQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEK--MPAKDLVSWNALL 358
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
GY+ G IG A+ IF ++++++++W M+ G +NG ++ ++LF M REG +P +Y
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
S + + L + +G+Q HA ++ G SSLS NALITMY+K G + A++VF +
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTM 478
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
++VSW ++I AL QHG G EA+ ++E ML+ GI+PD IT++ VLTAC+H GLV+QG
Sbjct: 479 PC-LDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQG 537
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
++Y+N M+ V++I P H+A ++DLL R+G EA + IE++P +P W +LLS CR
Sbjct: 538 RKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCR 597
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
VH N++LG IAA+KL + P++ G Y L N+Y++ G+WE+ A +RK M+ GVKK
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVAC 657
Query: 654 SWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV-KEQ 712
SW++++ +VH F V+D HP+ +A+Y + + E++ +G+VPDT+ VLHDVE D KE
Sbjct: 658 SWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKED 717
Query: 713 MLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
ML HSEK+A+AFGL+ P TT+RI KNLR C DCH+ +F+ K+V R+I++RD RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFH 777
Query: 773 HFKKGLCSCRDYW 785
HF+ G CSC ++W
Sbjct: 778 HFRNGECSCGNFW 790
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 305/754 (40%), Positives = 453/754 (60%), Gaps = 37/754 (4%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K++H II+ H FL N++++ YA S YA++VFD +P L SWN +L AY+K
Sbjct: 23 KMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKS 82
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSV 151
G L F +P+RD V+W +I Y+ G A++ + M++D T+ T+ ++
Sbjct: 83 GHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTM 142
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L ++ G +S GK++H V+K G + V + LL+MY+KVG AK VF G+ +N
Sbjct: 143 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNT 202
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+N ++ + G ++ A F M E+D V+W++MI G +QNG + EA+ F M K
Sbjct: 203 VMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREM-KI 260
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
LK D++ S L AC L + G+QIHA IIRT VG+ALI Y K +
Sbjct: 261 EGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHY 320
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A + +FD ++ ++VV+WTAM+VGY Q G
Sbjct: 321 A---------------------------------KTVFDRMKQKNVVSWTAMVVGYGQTG 347
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+AV++F M R G P++YTL +S ++++SL+ G Q H A+ +G ++VSN
Sbjct: 348 RAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSN 407
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+L+T+Y K G+I+ + R+FN ++ R E VSWT+M+ A AQ G EAIQLF++M++LG+K
Sbjct: 408 SLVTLYGKCGDIDDSTRLFNEMNVRDE-VSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLK 466
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD +T GV++AC+ GLVE+GQRY+ +M N + I P+ H++ M+DL R+G ++EA
Sbjct: 467 PDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMG 526
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI MP PD + W +LLSACR NL++GK AAE L+ ++P + Y+ L ++Y+S GK
Sbjct: 527 FINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 586
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+ A +R+ MK V+K G SW++ + K+H F +D P D IY K+ +++ +I +
Sbjct: 587 WDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIID 646
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+ PDT+ V HDVEE VK +ML HSE+LAIAFGLI P +R+ KNLRVC DCH+A
Sbjct: 647 NGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNA 706
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I + REI+VRDA RFH FK G CSC D+W
Sbjct: 707 TKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 231/494 (46%), Gaps = 71/494 (14%)
Query: 24 LKSRNPFV--GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS 81
L S N V GK +H ++IK G + + + L++ Y+K IS AKKVF + +
Sbjct: 145 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVM 204
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+NT++ G ++ A ++F M +DSVSW+ +I + G K AI F EM + +
Sbjct: 205 YNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGL 263
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
Q+ SVL +C LG ++ G+++H+ +++T L + V ++L++MY K AK
Sbjct: 264 KMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKT 323
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFD M+ KNV SW +M+ GY Q G EA
Sbjct: 324 VFDRMKQKNVVSW-------------------------------TAMVVGYGQTGRAGEA 352
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F +M + S + PD +TL +SACAN+ L+ G Q H I V N+L++
Sbjct: 353 VKIFLDMQR-SGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVT 411
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K GDI + R+F+ + RD V+WT
Sbjct: 412 LYGKC---------------------------------GDIDDSTRLFNEMNVRDEVSWT 438
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ Y Q G +A++LF MV+ G KP+ TL+ ++S S ++ G++ +
Sbjct: 439 AMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINE 498
Query: 442 -GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G S + +I ++S++G I A N + +R + + WT+++ A G E
Sbjct: 499 YGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKW 558
Query: 501 LFERMLELGIKPDH 514
E ++EL P H
Sbjct: 559 AAESLIEL--DPHH 570
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 12/236 (5%)
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
+NY SA + L + H K IH + +R+ + N ++ Y+ + ARRVF
Sbjct: 3 SNY-YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVF 61
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ I + SW ++++A ++ G E + FE++ + D +T+ ++ + GLV
Sbjct: 62 DGIP-QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPD----RDGVTWNVLIEGYSLSGLV 116
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLL---GRAGLLQEAYNFIENMPLEPDVVAWGS 587
+ YN M T +M+ L G L ++ + + + E ++
Sbjct: 117 GAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 176
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
LL ++ + A + ++ N+ Y+ L +CG EDA + + M+
Sbjct: 177 LLD---MYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME 229
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 297/757 (39%), Positives = 453/757 (59%), Gaps = 37/757 (4%)
Query: 31 VGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
V VH I+K L FL N L+ YAK+ ++ A++VFDEMP L + N +LSA
Sbjct: 30 VAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSAL 89
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTV 148
A + +F MP RD+VS+ +I ++ G +++++ +++++ V PT+ T+
Sbjct: 90 AHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++++ +AL D + G VH V++ G V + L++MYAK+G A+ VF M
Sbjct: 150 SAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEA 209
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K V +N +++ + ++ A+ F M++RD +TW +M+ G +QNG EAL +F M
Sbjct: 210 KTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM 269
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + D++T S L+AC L L+ GKQIHAYI RT ++ VG+AL+
Sbjct: 270 -RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALV-------- 320
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
D Y K I A +F + R++++WTAM+VGY
Sbjct: 321 -------------------------DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QN +++AV F M +G KP+++TL +++S ++LASL+ G Q H AL SG ++
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYIT 415
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
VSNAL+T+Y K G+I A R+F+ + + + VSWT+++ AQ G +E I LFE+ML
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALVTGYAQFGKAKETIDLFEKMLAN 474
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+KPD +T++GVL+AC+ GLVE+G Y++ M+ H I P H+ M+DL R+G +E
Sbjct: 475 GLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKE 534
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI+ MP PD W +LLS+CR+ N+++GK AAE LL +P N +Y LC+++++
Sbjct: 535 AEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAA 594
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W + A++R+ M+ VKK G SW++ +NKVH+F +D HP IY K+ + +
Sbjct: 595 KGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSK 654
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+ E G+ PD +SVLHDV + K M+ HHSEKLAIAFGLI P+ +RI+KNLRVC DC
Sbjct: 655 MAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDC 714
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+A KFI K+ R+I+VRDA RFH F G CSC D+W
Sbjct: 715 HNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/793 (37%), Positives = 479/793 (60%), Gaps = 16/793 (2%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFV--GKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
PNP + + YA L+ L R + + VH II G + N L++ Y K+
Sbjct: 3 PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS 62
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVT 119
++YA+++FDE+ + T++S Y G + LA VF P RD+V + +I
Sbjct: 63 SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSG 178
++ +AI +F +M + P FT SVLA + D + H+ +K+G
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGY 182
Query: 179 CVNVTNSLLNMYAKVGDE----MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+V+N+L+++Y+K A+ VFD + K+ SW +++ ++ +G DL
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 242
Query: 235 DQMIER-DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+ M + +V +N+MI+GY G+ EAL M M+ S ++ D+FT S + ACA
Sbjct: 243 EGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDEFTYPSVIRACATAGL 301
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L+LGKQ+HAY++R E D + N+L+S Y K G + A+ I E+ + +++++ LL
Sbjct: 302 LQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEK--MPAKDLVSWNALL 358
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
GY+ G IG A+ IF ++++++++W M+ G +NG ++ ++LF M REG +P +Y
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
S + + L + +G+Q HA L+ G SSLS NALITMY+K G + AR+VF +
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
++VSW ++I AL QHG G EA+ ++E ML+ GI+PD IT + VLTAC+H GLV+QG
Sbjct: 479 PC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 537
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
++Y++ M+ V++I P H+A ++DLL R+G +A + IE++P +P W +LLS CR
Sbjct: 538 RKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 597
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
VH N++LG IAA+KL + P++ G Y L N++++ G+WE+ A +RK M+ GVKK
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVAC 657
Query: 654 SWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV-KEQ 712
SW++++ +VH F V+D HP+ +A+Y + + E++ +G+VPDT+ VLHDVE D KE
Sbjct: 658 SWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKED 717
Query: 713 MLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
ML HSEK+A+AFGL+ P TT+RI KNLR C DCH+ +F+ +V R+I++RD RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFH 777
Query: 773 HFKKGLCSCRDYW 785
HF+ G CSC ++W
Sbjct: 778 HFRNGECSCGNFW 790
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/754 (40%), Positives = 453/754 (60%), Gaps = 37/754 (4%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K++H II+ + FL N++++ YA +S +YA++VFD +P L SWN +L AY+K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSV 151
G + F +P+RD V+W +I Y+ G A++ + M++D T+ T+ ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L ++ G +S GK++H V+K G + V + LL MYA VG AK VF G+ +N
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+N ++ + G ++ A F M E+D V+W +MI G +QNG EA+ F M K
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KV 263
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
LK D++ S L AC L + GKQIHA IIRT F VG+ALI
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI----------- 312
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D Y K + A+ +FD ++ ++VV+WTAM+VGY Q G
Sbjct: 313 ----------------------DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 350
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++AV++F M R G P++YTL +S ++++SL+ G Q H A+ SG ++VSN
Sbjct: 351 RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSN 410
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+L+T+Y K G+I+ + R+FN ++ R + VSWT+M+ A AQ G E IQLF++M++ G+K
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD +T GV++AC+ GLVE+GQRY+ +M + + I P+ H++ M+DL R+G L+EA
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI MP PD + W +LLSACR NL++GK AAE L+ ++P + Y+ L ++Y+S GK
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 589
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+ A +R+ M+ VKK G SW++ + K+H F +D P D IY K+ ++ ++I +
Sbjct: 590 WDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIID 649
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+ PDT+ V HDVEE VK +ML +HSE+LAIAFGLI P +R+ KNLRVC DCH+A
Sbjct: 650 NGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNA 709
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I + REI+VRDA RFH FK G CSC D+W
Sbjct: 710 TKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 223/485 (45%), Gaps = 69/485 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H ++IK G + + + L+ YA IS AKKVF + + +N+++
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G ++ A ++F M +DSVSW +I + G K AI F EM + Q+ S
Sbjct: 217 ACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL +C LG ++ GK++H+ +++T + V ++L++MY K AK VFD M+ KN
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SW +M+ GY Q G EA+ +F +M +
Sbjct: 336 VVSW-------------------------------TAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S + PD +TL +SACAN+ L+ G Q H I + V N+L++ Y K
Sbjct: 365 -SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC---- 419
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
GDI + R+F+ + RD V+WTAM+ Y Q
Sbjct: 420 -----------------------------GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G + ++LF MV+ G KP+ TL+ ++S S ++ G++ G S+
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+ +I ++S++G + A R N + + + + WT+++ A G E E ++EL
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL- 569
Query: 510 IKPDH 514
P H
Sbjct: 570 -DPHH 573
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 296/757 (39%), Positives = 452/757 (59%), Gaps = 37/757 (4%)
Query: 31 VGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
V VH I+K L FL N L+ YAK+ ++ A++VFDEMP L + N +LSA
Sbjct: 30 VAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSAL 89
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTV 148
A + +F MP RD+VS+ +I ++ G +++++ +++++ V PT+ T+
Sbjct: 90 AHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++++ +AL D + G VH V++ G V + L++MYAK+G A+ VF M
Sbjct: 150 SAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEA 209
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K V +N +++ + ++ A+ F M++RD +TW +M+ G +QNG EAL +F M
Sbjct: 210 KTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM 269
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + D++T S L+AC L + GKQIHAYI RT ++ VG+AL+
Sbjct: 270 -RAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALV-------- 320
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
D Y K I A +F + R++++WTAM+VGY
Sbjct: 321 -------------------------DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QN +++AV F M +G KP+++TL +++S ++LASL+ G Q H AL SG ++
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYIT 415
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
VSNAL+T+Y K G+I A R+F+ + + + VSWT+++ AQ G +E I LFE+ML
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALVTGYAQFGKAKETIDLFEKMLVN 474
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+KPD +T++GVL+AC+ GLVE+G Y++ M+ H I P H+ M+DL R+G +E
Sbjct: 475 GLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKE 534
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI+ MP PD W +LLS+CR+ N+++GK AAE LL +P N +Y LC+++++
Sbjct: 535 AEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAA 594
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W + A++R+ M+ VKK G SW++ +NKVH+F +D HP IY K+ + +
Sbjct: 595 KGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSK 654
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+ E G+ PD +SVLHDV + K M+ HHSEKLAIAFGLI P+ +RI+KNLRVC DC
Sbjct: 655 MAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDC 714
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+A KFI K+ R+I+VRDA RFH F G CSC D+W
Sbjct: 715 HNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/774 (37%), Positives = 470/774 (60%), Gaps = 26/774 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
+ VHA I+ G + N L++ Y K+ +I YA+ +FD++P + + T+LSAY+
Sbjct: 15 ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74
Query: 92 QGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G + LA ++FN P RD+VS+ +I ++ A+++FV+M + +P FT +
Sbjct: 75 AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134
Query: 150 SVLASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM---------A 199
SVL + + + D +++H V K G +V N+L++ Y + A
Sbjct: 135 SVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAA 194
Query: 200 KAVFD----GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +FD G R + +W +++ ++ + L AR + M + V WN+MI+GY
Sbjct: 195 RKLFDEAPPGRR--DEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHR 252
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG-- 313
G+ EA + M ++ D++T S +SA +N +G+Q+HAY++RT +G
Sbjct: 253 GFYEEAFDLLRRM-HSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHF 311
Query: 314 --PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
V NALI+ Y + G + A+++ ++ + +++++ +L G + I A IF
Sbjct: 312 VLSVNNALITLYTRCGKLVEARRVFDKMPVK--DLVSWNAILSGCVNARRIEEANSIFRE 369
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ R ++ WT M+ G QNG ++ ++LF M EG +P +Y + ++ S L SLD+G
Sbjct: 370 MPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNG 429
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+Q+H+ ++ G SSLSV NALITMYS+ G + AA VF + + ++VSW +MI ALAQ
Sbjct: 430 QQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY-VDSVSWNAMIAALAQ 488
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
HG G +AIQL+E+ML+ I PD IT++ +L+AC+H GLV++G+ Y++ M+ + I P
Sbjct: 489 HGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEED 548
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H++ ++DLL RAG+ EA N E+MP EP W +LL+ C +H N++LG AA++LL +
Sbjct: 549 HYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLEL 608
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
P G Y +L N+Y++ G+W++ A +RK M+ GVKK G SW++++N VHVF V+D +
Sbjct: 609 MPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAV 668
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
HP+ A+Y + ++ E++++G+VPDT VLHD+E + KE L HSEKLA+ +G++ P
Sbjct: 669 HPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLP 728
Query: 732 ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLR+C DCH+A K+I K+VDREI+VRD RFHHF+ G CSC +YW
Sbjct: 729 LGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 56/354 (15%)
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
A L + +HA+I+ + F + N LI Y K + A+ + ++ I +++A
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDK--IPKPDIVA 64
Query: 349 FTTLLDGYIKIGDIGPARRIFDS--LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
TT+L Y G+I A ++F++ + RD V++ AM+ + + A++LF M R
Sbjct: 65 ATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRL 124
Query: 407 GPKPNNYTLSAMLSVSSSLASLD-HGKQIHASALRSGEASSLSVSNALITMYSKAGN--- 462
G P+ +T S++L S +A + H +Q+H + G S SV NAL++ Y +
Sbjct: 125 GFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPL 184
Query: 463 ------INAARRVF------------------------NLIHWRQE--------TVSWTS 484
+ AAR++F +L+ R+ V+W +
Sbjct: 185 VNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNA 244
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNV 543
MI G EEA L RM LGI+ D TY V++A ++ GL G++ + +++ V
Sbjct: 245 MISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV 304
Query: 544 HKIKPTPSHFA-----SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
++P+ HF +++ L R G L EA + MP++ D+V+W ++LS C
Sbjct: 305 --VQPS-GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGC 354
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 54/272 (19%)
Query: 425 LASLDH---GKQIHASALRSG-------------------------------EASSLSVS 450
LA L H + +HA L SG + +
Sbjct: 6 LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAA 65
Query: 451 NALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+++ YS AGNI A ++FN ++TVS+ +MI A + G A+QLF +M LG
Sbjct: 66 TTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLG 125
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK--IKPTPSHFASMVD--------- 558
PD T+ VL A + + ++ + V K PS +++
Sbjct: 126 FVPDPFTFSSVLGALSL--IADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSP 183
Query: 559 LLGRAGLLQEAYN-FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN-S 616
L+ L+ A F E P D AW ++++ +N DL +AA +LL D+ +
Sbjct: 184 LVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAG--YVRNDDL--VAARELLEGMTDHIA 239
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
A++A+ + Y G +E+A ++ + M +G++
Sbjct: 240 VAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQ 271
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/702 (41%), Positives = 418/702 (59%), Gaps = 66/702 (9%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
+ S Y K G L+ A +VF+ MP RD VSW II Y++ G+ A+ +F EM + + P
Sbjct: 160 ALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKP 219
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
T+ SV+ C L L GK++H + +++G+ V V N L+NMYAK G+
Sbjct: 220 NSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN-------- 271
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
++ A F++M RDV +WN++I GYS N EAL
Sbjct: 272 -----------------------VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALA 308
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F N ++ +KP+ T+ S L ACA+L L+ G+QIH Y IR+ F++ VGNAL++ Y
Sbjct: 309 FF-NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMY 367
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G++ A ++F+ + ++VVAW A+
Sbjct: 368 AKC---------------------------------GNVNSAYKLFERMPKKNVVAWNAI 394
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ GY Q+G +A+ LF M +G KP+++ + ++L + +L+ GKQIH +RSG
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
S++ V L+ +Y+K GN+N A+++F + Q+ VSWT+MI+A HG GE+A+ LF
Sbjct: 455 ESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIHGHGEDALALFS 513
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M E G K DHI + +LTAC+H GLV+QG +Y+ MK+ + + P H+A +VDLLGRA
Sbjct: 514 KMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L EA I+NM LEPD WG+LL ACR+H N++LG+ AA+ L ++PDN+G Y L
Sbjct: 574 GHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLS 633
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ +WED A +RK MK GVKK G S V + V F V D HPQ + IY +
Sbjct: 634 NIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLE 693
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+++++++ G+VP+T L DVEE+ KE +L HSEKLAI+FG+I+T +RIMKNLR
Sbjct: 694 ILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLR 753
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC+DCH+A KFI K+V REI+VRDA RFHH K G CSC DYW
Sbjct: 754 VCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 243/544 (44%), Gaps = 121/544 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L+S + AHLL GK +H I+ G+ V + N L+N YAK +
Sbjct: 219 PNSSTLVSVMPVCAHLLALEQ-------GKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN 271
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
++ A K+F+ MP++ + SWN I+ Y+ + A FN M R
Sbjct: 272 VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG-------------- 317
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
+ P T+ SVL +C L L G+++H + +++G V
Sbjct: 318 -----------------IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG 360
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+L+NMYAK G+ A +F+ M KNV +WN ++S
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIIS------------------------ 396
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
GYSQ+G+ EAL +F M + +KPD F + S L ACA+ L+ GKQIH Y
Sbjct: 397 -------GYSQHGHPHEALALFIEM-QAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGY 448
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
IR+ F++ VG L+ YAK G V AQK
Sbjct: 449 TIRSGFESNVVVGTGLVDIYAKCGNVNTAQK----------------------------- 479
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+F+ + ++DVV+WT M++ Y +G +DA+ LF M G K ++ +A+L+ S
Sbjct: 480 ----LFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACS 535
Query: 424 SLASLDHGKQIHASALRS--GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+D G Q + ++S G A L L+ + +AG+++ A + + +
Sbjct: 536 HAGLVDQGLQ-YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANV 594
Query: 482 WTSMIVALAQH---GLGEEAIQ-LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
W +++ A H LGE+A + LFE + PD+ Y +L+ + + QR+
Sbjct: 595 WGALLGACRIHCNIELGEQAAKHLFE------LDPDNAGYYVLLS-----NIYAEAQRWE 643
Query: 538 NMMK 541
++ K
Sbjct: 644 DVAK 647
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 190/373 (50%), Gaps = 52/373 (13%)
Query: 231 RAQFDQM-IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
+ QF Q I + V W I GY +NG+ +AL ++ M + + + PDK S + AC
Sbjct: 73 QTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQR-TGINPDKLVFLSVIKACG 131
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ L+ G+++H II F++ VG AL S Y K G +E
Sbjct: 132 SQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLE------------------- 172
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
AR++FD + RDVV+W A++ GY QNG +A+ LF M G K
Sbjct: 173 --------------NARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIK 218
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
PN+ TL +++ V + L +L+ GKQIH A+RSG S + V N L+ MY+K GN+N A ++
Sbjct: 219 PNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKL 278
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F + R + SW ++I + + EA+ F RM GIKP+ IT V VL AC H
Sbjct: 279 FERMPIR-DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFA 337
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDV 582
+EQGQ+ + + I+ S F S +V++ + G + AY E MP + +V
Sbjct: 338 LEQGQQIHG-----YAIR---SGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNV 388
Query: 583 VAWGSLLSACRVH 595
VAW +++S H
Sbjct: 389 VAWNAIISGYSQH 401
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 298/775 (38%), Positives = 459/775 (59%), Gaps = 43/775 (5%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEM 74
YA LL + ++ P +H I++ H L N L+ Y K + A++VFD
Sbjct: 9 YAALLSAAART-EPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDAT 67
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P L ++N +LS A LD +F M RD+VS+ +I ++ G A+R++
Sbjct: 68 PHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYH 127
Query: 135 EMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
+++ V P++ T+++++ + +ALGD + G++ H +++ G V + L+ MYAK
Sbjct: 128 TLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAK 187
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
+G AK VFD M KNV +N +++ + ++ AR F+ M +RD +TW +M+ G+
Sbjct: 188 MGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGF 247
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+QNG + +AL F M + + D++T S L+AC L L+ GKQIHAYIIRT +D
Sbjct: 248 TQNGLESQALNFFRRM-RFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDN 306
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
VG+AL+ Y+K ++ A+ + +S N+I++T L
Sbjct: 307 VFVGSALVDMYSKCRSIKPAETAFRR--MSCKNIISWTAL-------------------- 344
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+VGY QNG +++AV +F M R+G P+++TL +++S ++LASL+ G
Sbjct: 345 -----------IVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGA 393
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN--LIHWRQETVSWTSMIVALA 490
Q H AL SG ++VSNAL+T+Y K G+I A R+F+ L H + VSWT+++ A
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFH---DQVSWTALVTGYA 450
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
Q G +E I LFE+ML +KPD +T++GVL+AC+ G VE+G Y++ M+ H I P
Sbjct: 451 QFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPID 510
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+ M+DL R+G L+EA FI+ MP+ PD + WG+LLSACR+ ++++G+ AAE LL
Sbjct: 511 DHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLE 570
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
I+P N +Y LC+++++ G W A +R+ M+ VKK G SW++ +NKVH+F +D
Sbjct: 571 IDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQ 630
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HP IY K+ + ++ E G+ PD +SVLHDV + K M+ HHSEKLAIAFGL+
Sbjct: 631 SHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFV 690
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
P +RI+KNLRVC DCH+A K I K+ R+I+VRDA RFH F G+CSC D+W
Sbjct: 691 PHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 286/705 (40%), Positives = 424/705 (60%), Gaps = 38/705 (5%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+++ Y+K G + LACE+F M R+ VSWT II + + A ++ +M+Q + P
Sbjct: 220 LITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPN 279
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T S+L SC L+ G+++HS + + GL V V N+L+ MY K
Sbjct: 280 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKC----------- 328
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY-DFEALG 263
N + AR FD+M +RDV++W++MIAGY+Q+GY D E+L
Sbjct: 329 ----------NCIQD----------ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLD 368
Query: 264 MFANML---KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
+L + + P+K T S L AC+ L+ G+QIHA I + F++ + A+
Sbjct: 369 EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIF 428
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ YAK G + A+++ S + NV+A+ +LL YIK GD+ A ++F + R+VV+W
Sbjct: 429 NMYAKCGSIYEAEQVF--SKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSW 486
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
M+ GY Q+G EL SM EG +P+ T+ ++L +L++L+ GK +HA A++
Sbjct: 487 NLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK 546
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G S V+ +LI MYSK G + AR VF+ I R +TV+W +M+ QHG+G EA+
Sbjct: 547 LGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR-DTVAWNAMLAGYGQHGIGPEAVD 605
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF+RML+ + P+ IT+ V++AC GLV++G+ + +M+ ++KP H+ MVDLL
Sbjct: 606 LFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLL 665
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG LQEA FI+ MP EPD+ W +LL AC+ H N+ L + AA +L +EP N+ Y
Sbjct: 666 GRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYV 725
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L N+Y+ G+W+D+ +RK M G+KK +G S ++I ++H F ED HP+ D+I+
Sbjct: 726 TLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHA 785
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
++ + E+KE G+ PD VLHDV+E KE+ L HHSEKLAIA+GL+ TP T +RIMK
Sbjct: 786 ELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMK 845
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCH+A KFI K+ REIV RDA RFH+FK G CSC D+W
Sbjct: 846 NLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 225/472 (47%), Gaps = 73/472 (15%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR K AI++ + Q +L T ++ C L GK VH + + GL+ + +
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
NSL+N Y+K GD + VF M L+ DVV
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLR-------------------------------DVV 145
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TW+SMIA Y+ N + +A F M KD++++P++ T S L AC N L+ ++IH
Sbjct: 146 TWSSMIAAYAGNNHPAKAFDTFERM-KDANIEPNRITFLSILKACNNYSMLEKAREIHTV 204
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ + + V ALI+ Y+K G + +A +
Sbjct: 205 VKASGMETDVAVATALITMYSKCGEISLACE----------------------------- 235
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
IF +++R+VV+WTA++ Q+ +A EL+ M++ G PN T ++L+ +
Sbjct: 236 ----IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ +L+ G++IH+ G + + V+NALITMY K I AR F+ + +++ +SW+
Sbjct: 292 TPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMS-KRDVISWS 350
Query: 484 SMIVALAQHGLG-----EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+MI AQ G +E QL ERM G+ P+ +T++ +L AC+ G +EQG++ +
Sbjct: 351 AMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHA 410
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+ V + S ++ ++ + G + EA M +VVAW SLL+
Sbjct: 411 EISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLT 460
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 133/269 (49%), Gaps = 32/269 (11%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA I K G L+ ++ N YAK SI A++VF +M K + +W ++L+ Y K
Sbjct: 405 GRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIK 464
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L A +VF+ M R+ VSW +I Y + G + M + P + T+ S+
Sbjct: 465 CGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISI 524
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C AL L GK VH+ VK GL V SL+ MY+K G+ A+ VFD
Sbjct: 525 LEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFD------- 577
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
++ RD V WN+M+AGY Q+G EA+ +F MLK+
Sbjct: 578 ------------------------KISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKE 613
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQI 300
+ P++ T + +SAC ++ G++I
Sbjct: 614 -RVPPNEITFTAVISACGRAGLVQEGREI 641
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 174/354 (49%), Gaps = 43/354 (12%)
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
++ K +++ G++ +++ +L++ Y K GD+ ++F + RDVV W++M+ Y
Sbjct: 98 KMVHKQLDELGLA-IDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAG 156
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N A + F M +PN T ++L ++ + L+ ++IH SG + ++V
Sbjct: 157 NNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAV 216
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+ ALITMYSK G I+ A +F + R VSWT++I A AQH EA +L+E+ML+ G
Sbjct: 217 ATALITMYSKCGEISLACEIFQKMKERN-VVSWTAIIQANAQHRKLNEAFELYEKMLQAG 275
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYN-------------------MMKNVHKIKPTP 550
I P+ +T+V +L +C + +G+R ++ M + I+
Sbjct: 276 ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDAR 335
Query: 551 SHF-----------ASMVDLLGRAGL-----LQEAYNFIENMPLE---PDVVAWGSLLSA 591
F ++M+ ++G L E + +E M E P+ V + S+L A
Sbjct: 336 ETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKA 395
Query: 592 CRVHKNLDLGK-IAAE-KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
C VH L+ G+ I AE + E D S +A+ N+Y+ CG +A + M+
Sbjct: 396 CSVHGALEQGRQIHAEISKVGFESDRS-LQTAIFNMYAKCGSIYEAEQVFSKME 448
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 296/713 (41%), Positives = 433/713 (60%), Gaps = 38/713 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QV 141
N +++ Y++ G L A +VF+ MP D VSW +II +Y ++G+ K A+ MF +M +
Sbjct: 166 NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGF 225
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P T+ +VL C ++G S GK+ H F V + + + V N L++MYAK G A
Sbjct: 226 RPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANT 285
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGY 257
VF M +K+V SWN +V+ + GR + A F+QM I+ DVVTW++ I+GY+Q G
Sbjct: 286 VFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+EALG+ ML S +KP++ TL S LS CA++ L GK+IH Y I+ D
Sbjct: 346 GYEALGVCRQMLS-SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD------- 397
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDR 375
+ ++G N++ L+D Y K + AR +FDSL ++R
Sbjct: 398 ------------------LRKNGHGDENMV-INQLIDMYAKCKKVDIARAMFDSLSPKER 438
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREG--PKPNNYTLSAMLSVSSSLASLDHGKQ 433
DVV WT M+ GY Q+G A+EL M E +PN +T+S L +SLA+L GKQ
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQ 498
Query: 434 IHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IHA ALR+ + A L VSN LI MY+K G+I AR VF+ + + E V+WTS++ H
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNE-VTWTSLMTGYGMH 557
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G GEEA+ +FE M +G K D +T + VL AC+H G+++QG Y+N MK + P P H
Sbjct: 558 GYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEH 617
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+A +VDLLGRAG L A IE MP+EP V W +LLS CR+H ++LG+ AA+K+ +
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELA 677
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
+N G+Y+ L N+Y++ G+W+D IR M++ G+KK G SWV+ F V D H
Sbjct: 678 SNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTH 737
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
P IY ++ IK++G+VP+T LHDV+++ K+ +L HSEKLA+A+G+++TP+
Sbjct: 738 PHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQ 797
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLRVC DCH+A ++ +++D EI++RD++RFHHFK GLCSC+ YW
Sbjct: 798 GAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 264/561 (47%), Gaps = 59/561 (10%)
Query: 57 FYAKTESISYAKKVFDEM---PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS--V 111
F K ++IS K + ++ + TL + ++S Y G L A + P D+
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVY 93
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
W ++I +Y GR + F M P +T V +C + + G H+
Sbjct: 94 HWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALS 153
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
TG V V N+L+ MY++ G L AR
Sbjct: 154 RVTGFMSNVFVGNALVAMYSRCGS-------------------------------LSDAR 182
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M DVV+WNS+I Y++ G AL MF+ M + +PD TL + L CA++
Sbjct: 183 KVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASV 242
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
LGKQ H + + +E VGN L+ YAK G ++ A + S + +V+++
Sbjct: 243 GTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVF--SNMPVKDVVSWNA 300
Query: 352 LLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++ GY +IG A R+F+ +++ DVV W+A + GY Q GL +A+ + R M+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-------RSGEASSLSVSNALITMYSKA 460
KPN TL ++LS +S+ +L HGK+IH A+ ++G V N LI MY+K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC 420
Query: 461 GNINAARRVFNLIHWRQ-ETVSWTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITY 517
++ AR +F+ + ++ + V+WT MI +QHG +A++L M E +P+ T
Sbjct: 421 KKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 518 VGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFAS--MVDLLGRAGLLQEAYNFIE 574
L AC + G++ + ++N P F S ++D+ + G + +A +
Sbjct: 481 SCALVACASLAALSIGKQIHAYALRNQQNAVPL---FVSNCLIDMYAKCGDIGDARLVFD 537
Query: 575 NMPLEPDVVAWGSLLSACRVH 595
NM +E + V W SL++ +H
Sbjct: 538 NM-MEKNEVTWTSLMTGYGMH 557
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 233/489 (47%), Gaps = 83/489 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK H + + ++F+ N L++ YAK + A VF MPVK + SWN +++ Y+
Sbjct: 247 LGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYS 306
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ GR + A +F M D V+W+ I Y + G A+ + +M+ + P +
Sbjct: 307 QIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-------VTNSLLNMYAKVGDEMMA 199
T+ SVL+ C ++G L GK++H + +K + N V N L++MYAK +A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIA 426
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+A+FD + K ERDVVTW MI GYSQ+G
Sbjct: 427 RAMFDSLSPK-----------------------------ERDVVTWTVMIGGYSQHGDAN 457
Query: 260 EALGMFANML-KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--VG 316
+AL + + M +D +P+ FT++ L ACA+L L +GKQIHAY +R + +A P V
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAV-PLFVS 516
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI YAK G DIG AR +FD++ +++
Sbjct: 517 NCLIDMYAKCG---------------------------------DIGDARLVFDNMMEKN 543
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V WT+++ GY +G ++A+ +F M R G K + TL +L S +D G + +
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME-YF 602
Query: 437 SALRS--GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
+ +++ G + L+ + +AG +NAA R+ + V W +++ HG
Sbjct: 603 NRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGK 662
Query: 494 --LGEEAIQ 500
LGE A +
Sbjct: 663 VELGEYAAK 671
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 446/764 (58%), Gaps = 69/764 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ HA + G +VF+ N+L+ Y++ S+S A+KVFDEM V W
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV-----W--------- 191
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTS 150
D VSW +II +Y ++G+ K A+ MF M + P T+ +
Sbjct: 192 -----------------DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL C +LG S GK++H F V + + + V N L++MYAK G A VF M +K+
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
V SWN +V+ + GR + A F++M I+ DVVTW++ I+GY+Q G +EALG+
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML S +KP++ TL S LS CA++ L GK+IH Y I+ D
Sbjct: 355 QMLS-SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID---------------- 397
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAML 384
+ ++G N++ L+D Y K + AR +FDSL ++RDVV WT M+
Sbjct: 398 ---------LRKNGHGDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 385 VGYEQNGLNKDAVELFRSMVREG--PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
GY Q+G A+EL M E +PN +T+S L +SLA+L GKQIHA ALR+
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 443 E-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ A L VSN LI MY+K G+I+ AR VF+ + + E V+WTS++ HG GEEA+ +
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEALGI 566
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M +G K D +T + VL AC+H G+++QG Y+N MK V + P P H+A +VDLLG
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L A IE MP+EP V W + LS CR+H ++LG+ AAEK+ + ++ G+Y+
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY++ G+W+D IR M++ GVKK G SWV+ F V D HP IY
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ IK++G+VP+T LHDV+++ K+ +L HSEKLA+A+G+++TP+ +RI KN
Sbjct: 747 LLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKN 806
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+A ++ +++D +I++RD++RFHHFK G CSC+ YW
Sbjct: 807 LRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 270/561 (48%), Gaps = 59/561 (10%)
Query: 57 FYAKTESISYAKKVFDEM---PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS--V 111
F K ++IS K + ++ + TL + ++S Y G L A + P D+
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
W ++I +Y + G + +F M P +T V +C + + G+ H+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+ TG V V N+L+ MY+ R +++S AR
Sbjct: 154 LVTGFISNVFVGNALVAMYS---------------RCRSLSD----------------AR 182
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M DVV+WNS+I Y++ G AL MF+ M + +PD TL + L CA+L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
LGKQ+H + + +E VGN L+ YAK G ++ A + S +S +V+++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF--SNMSVKDVVSWNA 300
Query: 352 LLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++ GY +IG A R+F+ +++ DVV W+A + GY Q GL +A+ + R M+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-------RSGEASSLSVSNALITMYSKA 460
KPN TL ++LS +S+ +L HGK+IH A+ ++G V N LI MY+K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 461 GNINAARRVFNLIHWRQ-ETVSWTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITY 517
++ AR +F+ + ++ + V+WT MI +QHG +A++L M E +P+ T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 518 VGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFAS--MVDLLGRAGLLQEAYNFIE 574
L AC + G++ + ++N P F S ++D+ + G + +A +
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPL---FVSNCLIDMYAKCGSISDARLVFD 537
Query: 575 NMPLEPDVVAWGSLLSACRVH 595
NM + + V W SL++ +H
Sbjct: 538 NM-MAKNEVTWTSLMTGYGMH 557
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 234/502 (46%), Gaps = 86/502 (17%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + + ++F+ N L++ YAK + A VF M VK + SWN +++ Y+
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ GR + A +F M D V+W+ I Y + G A+ + +M+ + P +
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-------VTNSLLNMYAKVGDEMMA 199
T+ SVL+ C ++G L GK++H + +K + N V N L++MYAK A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+A+FD + K ERDVVTW MI GYSQ+G
Sbjct: 427 RAMFDSLSPK-----------------------------ERDVVTWTVMIGGYSQHGDAN 457
Query: 260 EALGMFANML-KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--VG 316
+AL + + M +D +P+ FT++ L ACA+L L++GKQIHAY +R + +A P V
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV-PLFVS 516
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI YAK G I AR +FD++ ++
Sbjct: 517 NCLIDMYAKCG---------------------------------SISDARLVFDNMMAKN 543
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V WT+++ GY +G ++A+ +F M R G K + TL +L S +D G + +
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME-YF 602
Query: 437 SALRS--GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
+ +++ G + L+ + +AG +NAA R+ + V W + + HG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 494 --LGEEAIQLFERMLELGIKPD 513
LGE A E++ EL D
Sbjct: 663 VELGEYAA---EKITELASNHD 681
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 288/694 (41%), Positives = 427/694 (61%), Gaps = 64/694 (9%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G L A +VF+ MP R+ V+WT +I + ++G ++AI +F++M +P +FT +SVL
Sbjct: 197 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 256
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
++CT LG L+ GK++HS V++ GL+ V V SL++MYAK +
Sbjct: 257 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD---------------- 300
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG-YDFEALGMFANMLKD 271
G +D +R F+QM E +V++W ++I Y Q+G D EA+ +F M+
Sbjct: 301 ------------GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS- 347
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++P+ F+ +S L AC NL G+Q+++Y ++ + VGN+LIS YA+ G +E
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRME- 406
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AR+ FD L ++++V++ A++ GY +N
Sbjct: 407 --------------------------------DARKAFDILFEKNLVSYNAIVDGYAKNL 434
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+++A LF + G + +T +++LS ++S+ ++ G+QIH L+ G S+ + N
Sbjct: 435 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 494
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
ALI+MYS+ GNI AA +VFN + R +SWTSMI A+HG A+++F +MLE G K
Sbjct: 495 ALISMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTK 553
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+ ITYV VL+AC+H G++ +GQ+++N M H I P H+A MVDLLGR+GLL EA
Sbjct: 554 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 613
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI +MPL D + W +LL ACRVH N +LG+ AAE +L EPD+ AY L NL++S G+
Sbjct: 614 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 673
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+D IRKSMK + K G SW++++N+VH F V + HPQ IY ++ ++ +IKE
Sbjct: 674 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 733
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
MG++PDT VLHD+EE+ KEQ L HSEK+A+AFGLIST ++ +RI KNLRVC DCH+A
Sbjct: 734 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 793
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK+I REIVVRD+ RFHH K G+CSC DYW
Sbjct: 794 IKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 159/598 (26%), Positives = 291/598 (48%), Gaps = 112/598 (18%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
PP L + Y+ LL+S ++ RN +GKLVH ++++ GL L + N+L++ Y+K
Sbjct: 41 PPDLTT----YSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTE 96
Query: 66 YAKKVFDEMPVK-TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
A+ +F+ M K L SW+ ++S +A +S+ W
Sbjct: 97 TARLIFEGMGNKRDLVSWSAMVSCFAN-----------------NSMEW----------- 128
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVT 183
AI F++M++ P ++ +V+ +C+ G+ ++ FVVKTG L V V
Sbjct: 129 ---QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVG 185
Query: 184 NSLLNMYAK-VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
L++M+ K GD A VFD M ER++
Sbjct: 186 CELIDMFVKGSGDLGSAYKVFDKMP-------------------------------ERNL 214
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
VTW MI ++Q G +A+ +F +M + S PD+FT +S LSAC L L LGKQ+H+
Sbjct: 215 VTWTLMITRFAQLGCARDAIDLFLDM-ELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 273
Query: 303 YIIRTEFDATGPVGNALISCYAKV---GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+IR VG +L+ YAK G V+ ++K+ EQ
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ--------------------- 312
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG-LNKDAVELFRSMVREGPKPNNYTLSAM 418
+ + +V++WTA++ Y Q+G +K+A+ELF M+ +PN+++ S++
Sbjct: 313 ------------MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSV 360
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L +L+ G+Q+++ A++ G AS V N+LI+MY+++G + AR+ F+++ + +
Sbjct: 361 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKN 419
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VS+ +++ A++ EEA LF + + GI T+ +L+ G + +G++ +
Sbjct: 420 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 479
Query: 539 -MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++K +K + +++ + R G ++ A+ M + +V++W S+++ H
Sbjct: 480 RLLKGGYKSNQCICN--ALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 534
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 233/475 (49%), Gaps = 71/475 (14%)
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
++GR +A M Q P T + +L SC + GK VH ++++GL
Sbjct: 21 DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV 80
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V N+L+++Y+K GD A+ +F+GM K RD
Sbjct: 81 VLNTLISLYSKCGDTETARLIFEGMGNK------------------------------RD 110
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+W++M++ ++ N +++A+ F +ML + P+++ A+ + AC+N +G+ I+
Sbjct: 111 LVSWSAMVSCFANNSMEWQAIWTFLDML-ELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169
Query: 302 AYIIRTEF-DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
++++T + +A VG LI + K G
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGS--------------------------------G 197
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D+G A ++FD + +R++V WT M+ + Q G +DA++LF M G P+ +T S++LS
Sbjct: 198 DLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 257
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRVFNLIHWRQ 477
+ L L GKQ+H+ +R G A + V +L+ MY+K G+++ +R+VF +
Sbjct: 258 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EH 316
Query: 478 ETVSWTSMIVALAQHG-LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+SWT++I A Q G +EAI+LF +M+ I+P+H ++ VL AC + G++
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
Y+ + I S++ + R+G +++A + + E ++V++ +++
Sbjct: 377 YSYAVKL-GIASVNCVGNSLISMYARSGRMEDARKAFD-ILFEKNLVSYNAIVDG 429
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 64/291 (21%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P F ++ +L++ +P+ G+ V++ +K G+ + NSL++ YA++ + A+
Sbjct: 350 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 409
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
K FD + K L S+N I+ YAK NL + +
Sbjct: 410 KAFDILFEKNLVSYNAIVDGYAK-----------NL--------------------KSEE 438
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A +F E+ + + FT S+L+ ++G + G+++H ++K G + N+L++
Sbjct: 439 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 498
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY++ G+ A VF+ M +NV SW SM
Sbjct: 499 MYSRCGNIEAAFQVFNEMEDRNVISW-------------------------------TSM 527
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
I G++++G+ AL MF ML ++ KP++ T + LSAC+++ + G++
Sbjct: 528 ITGFAKHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQK 577
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 288/694 (41%), Positives = 427/694 (61%), Gaps = 64/694 (9%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G L A +VF+ MP R+ V+WT +I + ++G ++AI +F++M +P +FT +SVL
Sbjct: 179 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 238
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
++CT LG L+ GK++HS V++ GL+ V V SL++MYAK +
Sbjct: 239 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD---------------- 282
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG-YDFEALGMFANMLKD 271
G +D +R F+QM E +V++W ++I Y Q+G D EA+ +F M+
Sbjct: 283 ------------GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS- 329
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++P+ F+ +S L AC NL G+Q+++Y ++ + VGN+LIS YA+ G +E
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRME- 388
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AR+ FD L ++++V++ A++ GY +N
Sbjct: 389 --------------------------------DARKAFDILFEKNLVSYNAIVDGYAKNL 416
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+++A LF + G + +T +++LS ++S+ ++ G+QIH L+ G S+ + N
Sbjct: 417 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 476
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
ALI+MYS+ GNI AA +VFN + R +SWTSMI A+HG A+++F +MLE G K
Sbjct: 477 ALISMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTK 535
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+ ITYV VL+AC+H G++ +GQ+++N M H I P H+A MVDLLGR+GLL EA
Sbjct: 536 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 595
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI +MPL D + W +LL ACRVH N +LG+ AAE +L EPD+ AY L NL++S G+
Sbjct: 596 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 655
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+D IRKSMK + K G SW++++N+VH F V + HPQ IY ++ ++ +IKE
Sbjct: 656 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 715
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
MG++PDT VLHD+EE+ KEQ L HSEK+A+AFGLIST ++ +RI KNLRVC DCH+A
Sbjct: 716 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 775
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK+I REIVVRD+ RFHH K G+CSC DYW
Sbjct: 776 IKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 159/598 (26%), Positives = 291/598 (48%), Gaps = 112/598 (18%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
PP L + Y+ LL+S ++ RN +GKLVH ++++ GL L + N+L++ Y+K
Sbjct: 23 PPDLTT----YSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTE 78
Query: 66 YAKKVFDEMPVK-TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
A+ +F+ M K L SW+ ++S +A +S+ W
Sbjct: 79 TARLIFEGMGNKRDLVSWSAMVSCFAN-----------------NSMEW----------- 110
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVT 183
AI F++M++ P ++ +V+ +C+ G+ ++ FVVKTG L V V
Sbjct: 111 ---QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVG 167
Query: 184 NSLLNMYAK-VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
L++M+ K GD A VFD M ER++
Sbjct: 168 CELIDMFVKGSGDLGSAYKVFDKMP-------------------------------ERNL 196
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
VTW MI ++Q G +A+ +F +M + S PD+FT +S LSAC L L LGKQ+H+
Sbjct: 197 VTWTLMITRFAQLGCARDAIDLFLDM-ELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 255
Query: 303 YIIRTEFDATGPVGNALISCYAKV---GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+IR VG +L+ YAK G V+ ++K+ EQ
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ--------------------- 294
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG-LNKDAVELFRSMVREGPKPNNYTLSAM 418
+ + +V++WTA++ Y Q+G +K+A+ELF M+ +PN+++ S++
Sbjct: 295 ------------MPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSV 342
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L +L+ G+Q+++ A++ G AS V N+LI+MY+++G + AR+ F+++ + +
Sbjct: 343 LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKN 401
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VS+ +++ A++ EEA LF + + GI T+ +L+ G + +G++ +
Sbjct: 402 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 461
Query: 539 -MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++K +K + +++ + R G ++ A+ M + +V++W S+++ H
Sbjct: 462 RLLKGGYKSNQCICN--ALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 516
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 233/475 (49%), Gaps = 71/475 (14%)
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
++GR +A M Q P T + +L SC + GK VH ++++GL
Sbjct: 3 DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV 62
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V N+L+++Y+K GD A+ +F+GM K RD
Sbjct: 63 VLNTLISLYSKCGDTETARLIFEGMGNK------------------------------RD 92
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+W++M++ ++ N +++A+ F +ML + P+++ A+ + AC+N +G+ I+
Sbjct: 93 LVSWSAMVSCFANNSMEWQAIWTFLDML-ELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151
Query: 302 AYIIRTEF-DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
++++T + +A VG LI + K G
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGS--------------------------------G 179
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D+G A ++FD + +R++V WT M+ + Q G +DA++LF M G P+ +T S++LS
Sbjct: 180 DLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 239
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRVFNLIHWRQ 477
+ L L GKQ+H+ +R G A + V +L+ MY+K G+++ +R+VF +
Sbjct: 240 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EH 298
Query: 478 ETVSWTSMIVALAQHG-LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+SWT++I A Q G +EAI+LF +M+ I+P+H ++ VL AC + G++
Sbjct: 299 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 358
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
Y+ + I S++ + R+G +++A + + E ++V++ +++
Sbjct: 359 YSYAVKL-GIASVNCVGNSLISMYARSGRMEDARKAFD-ILFEKNLVSYNAIVDG 411
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 64/291 (21%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P F ++ +L++ +P+ G+ V++ +K G+ + NSL++ YA++ + A+
Sbjct: 332 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 391
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
K FD + K L S+N I+ YAK NL + +
Sbjct: 392 KAFDILFEKNLVSYNAIVDGYAK-----------NL--------------------KSEE 420
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A +F E+ + + FT S+L+ ++G + G+++H ++K G + N+L++
Sbjct: 421 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 480
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY++ G+ A VF+ M +NV SW SM
Sbjct: 481 MYSRCGNIEAAFQVFNEMEDRNVISW-------------------------------TSM 509
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
I G++++G+ AL MF ML ++ KP++ T + LSAC+++ + G++
Sbjct: 510 ITGFAKHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQK 559
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 286/689 (41%), Positives = 426/689 (61%), Gaps = 64/689 (9%)
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
A +VF+ MP R+ V+WT +I + ++G ++AI +F++M +P +FT +SVL++CT
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 158 LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
LG L+ GK++HS V++ GL+ V V SL++MYAK +
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD--------------------- 102
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY-DFEALGMFANMLKDSSLKP 276
G +D +R F+QM E +V++W ++I Y+Q+G D EA+ +F M+ ++P
Sbjct: 103 -------GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS-GHIRP 154
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ F+ +S L AC NL G+Q+++Y ++ + VGN+LIS YA+ G +E
Sbjct: 155 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRME------ 208
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
AR+ FD L ++++V++ A++ GY +N +++A
Sbjct: 209 ---------------------------DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
LF + G + +T +++LS ++S+ ++ G+QIH L+ G S+ + NALI+M
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YS+ GNI AA +VFN + R +SWTSMI A+HG A+++F +MLE G KP+ IT
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
YV VL+AC+H G++ +GQ+++N M H I P H+A MVDLLGR+GLL EA FI +M
Sbjct: 361 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 420
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
PL D + W +LL ACRVH N +LG+ AAE +L EPD+ AY L NL++S G+W+D
Sbjct: 421 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 480
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
IRKSMK + K G SW++++N+VH F V + HPQ IY ++ ++ +IKEMG++P
Sbjct: 481 KIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIP 540
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
DT VLHD+EE+ KEQ L HSEK+A+AFGLIST ++ +RI KNLRVC DCH+AIK+I
Sbjct: 541 DTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYIS 600
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
REIVVRD+ RFHH K G+CSC DYW
Sbjct: 601 MATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 221/487 (45%), Gaps = 101/487 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE---SISYAKKVFDEMPVKTLCSWNTILS 87
+GK +H+R+I+ GL L V + SL++ YAK S+ ++KVF++MP + SW I++
Sbjct: 69 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 128
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AYA+ G D K AI +F +M+ + P F+
Sbjct: 129 AYAQSGECD------------------------------KEAIELFCKMISGHIRPNHFS 158
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+SVL +C L D G++V+S+ VK G++ V NSL++MYA+ G A+ FD +
Sbjct: 159 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 218
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
KN +V++N+++ GY++N EA +F N
Sbjct: 219 EKN-------------------------------LVSYNAIVDGYAKNLKSEEAFLLF-N 246
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+ D+ + FT AS LS A++ + G+QIH +++ + + + NALIS Y++ G
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A ++ + + NVI++T+ M+ G+
Sbjct: 307 NIEAAFQVFNE--MEDRNVISWTS-------------------------------MITGF 333
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
++G A+E+F M+ G KPN T A+LS S + + G++ S + G
Sbjct: 334 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 393
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ ++ + ++G + A N + + + W +++ A HG E E +L
Sbjct: 394 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 453
Query: 507 ELGIKPD 513
E +PD
Sbjct: 454 EQ--EPD 458
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 131/231 (56%), Gaps = 7/231 (3%)
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
PA ++FD + +R++V WT M+ + Q G +DA++LF M G P+ +T S++LS
Sbjct: 2 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRVFNLIHWRQET 479
+ L L GKQ+H+ +R G A + V +L+ MY+K G+++ +R+VF +
Sbjct: 62 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNV 120
Query: 480 VSWTSMIVALAQHG-LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+SWT++I A AQ G +EAI+LF +M+ I+P+H ++ VL AC + G++ Y+
Sbjct: 121 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 180
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ I S++ + R+G +++A ++ E ++V++ +++
Sbjct: 181 YAVKL-GIASVNCVGNSLISMYARSGRMEDARKAF-DILFEKNLVSYNAIV 229
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 64/291 (21%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P F ++ +L++ +P+ G+ V++ +K G+ + NSL++ YA++ + A+
Sbjct: 152 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 211
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
K FD + K L S+N I+ YAK NL + +
Sbjct: 212 KAFDILFEKNLVSYNAIVDGYAK-----------NL--------------------KSEE 240
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A +F E+ + + FT S+L+ ++G + G+++H ++K G + N+L++
Sbjct: 241 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 300
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY++ G+ A VF+ M +NV SW SM
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDRNVISW-------------------------------TSM 329
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
I G++++G+ AL MF ML ++ KP++ T + LSAC+++ + G++
Sbjct: 330 ITGFAKHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQK 379
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 286/689 (41%), Positives = 426/689 (61%), Gaps = 64/689 (9%)
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
A +VF+ MP R+ V+WT +I + ++G ++AI +F++M +P +FT +SVL++CT
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 158 LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
LG L+ GK++HS V++ GL+ V V SL++MYAK +
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD--------------------- 107
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY-DFEALGMFANMLKDSSLKP 276
G +D +R F+QM E +V++W ++I Y+Q+G D EA+ +F M+ ++P
Sbjct: 108 -------GSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS-GHIRP 159
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ F+ +S L AC NL G+Q+++Y ++ + VGN+LIS YA+ G +E
Sbjct: 160 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRME------ 213
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
AR+ FD L ++++V++ A++ GY +N +++A
Sbjct: 214 ---------------------------DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
LF + G + +T +++LS ++S+ ++ G+QIH L+ G S+ + NALI+M
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YS+ GNI AA +VFN + R +SWTSMI A+HG A+++F +MLE G KP+ IT
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
YV VL+AC+H G++ +GQ+++N M H I P H+A MVDLLGR+GLL EA FI +M
Sbjct: 366 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 425
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
PL D + W +LL ACRVH N +LG+ AAE +L EPD+ AY L NL++S G+W+D
Sbjct: 426 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 485
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
IRKSMK + K G SW++++N+VH F V + HPQ IY ++ ++ +IKEMG++P
Sbjct: 486 KIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIP 545
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
DT VLHD+EE+ KEQ L HSEK+A+AFGLIST ++ +RI KNLRVC DCH+AIK+I
Sbjct: 546 DTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYIS 605
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
REIVVRD+ RFHH K G+CSC DYW
Sbjct: 606 MATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 221/487 (45%), Gaps = 101/487 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE---SISYAKKVFDEMPVKTLCSWNTILS 87
+GK +H+R+I+ GL L V + SL++ YAK S+ ++KVF++MP + SW I++
Sbjct: 74 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 133
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AYA+ G D K AI +F +M+ + P F+
Sbjct: 134 AYAQSGECD------------------------------KEAIELFCKMISGHIRPNHFS 163
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+SVL +C L D G++V+S+ VK G++ V NSL++MYA+ G A+ FD +
Sbjct: 164 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILF 223
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
KN +V++N+++ GY++N EA +F N
Sbjct: 224 EKN-------------------------------LVSYNAIVDGYAKNLKSEEAFLLF-N 251
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+ D+ + FT AS LS A++ + G+QIH +++ + + + NALIS Y++ G
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A ++ + + NVI++T+ M+ G+
Sbjct: 312 NIEAAFQVFNE--MEDRNVISWTS-------------------------------MITGF 338
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
++G A+E+F M+ G KPN T A+LS S + + G++ S + G
Sbjct: 339 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 398
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ ++ + ++G + A N + + + W +++ A HG E E +L
Sbjct: 399 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 458
Query: 507 ELGIKPD 513
E +PD
Sbjct: 459 EQ--EPD 463
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 131/231 (56%), Gaps = 7/231 (3%)
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
PA ++FD + +R++V WT M+ + Q G +DA++LF M G P+ +T S++LS
Sbjct: 7 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRVFNLIHWRQET 479
+ L L GKQ+H+ +R G A + V +L+ MY+K G+++ +R+VF +
Sbjct: 67 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNV 125
Query: 480 VSWTSMIVALAQHG-LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+SWT++I A AQ G +EAI+LF +M+ I+P+H ++ VL AC + G++ Y+
Sbjct: 126 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 185
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ I S++ + R+G +++A + + E ++V++ +++
Sbjct: 186 YAVKL-GIASVNCVGNSLISMYARSGRMEDARKAFDIL-FEKNLVSYNAIV 234
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 64/291 (21%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P F ++ +L++ +P+ G+ V++ +K G+ + NSL++ YA++ + A+
Sbjct: 157 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 216
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
K FD + K L S+N I+ YAK NL + +
Sbjct: 217 KAFDILFEKNLVSYNAIVDGYAK-----------NL--------------------KSEE 245
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A +F E+ + + FT S+L+ ++G + G+++H ++K G + N+L++
Sbjct: 246 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 305
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY++ G+ A VF+ M +NV SW SM
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDRNVISW-------------------------------TSM 334
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
I G++++G+ AL MF ML ++ KP++ T + LSAC+++ + G++
Sbjct: 335 ITGFAKHGFATRALEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQK 384
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 289/759 (38%), Positives = 454/759 (59%), Gaps = 43/759 (5%)
Query: 35 VHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
VH +++ H ++ N L+ YA++ + A+++FD MP L + N +LSA A
Sbjct: 31 VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-------VLPTQF 146
L +F MP RD+VS+ +I ++ G A + +++++ V P++
Sbjct: 91 LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T++ ++ + +ALGD + G++VH +++ G + L++MYAK+G AK VFD M
Sbjct: 151 TMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM 210
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+KNV +N +++ + ++ AR F+ M++RD +TW +M+ G +QNG EAL +F
Sbjct: 211 VVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFR 270
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M + + D++T S L+AC L + GKQIHAY IRT +D VG+AL+ Y+K
Sbjct: 271 RM-RAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKC 329
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+ + A +F + +++++WTAM+VG
Sbjct: 330 RSIRL---------------------------------AEAVFRRMTCKNIISWTAMIVG 356
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QNG ++AV +F M +G KPN++TL +++S ++LASL+ G Q H AL SG
Sbjct: 357 YGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPY 416
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
++VS+AL+T+Y K G+I A R+F+ + + + VS+T+++ AQ G +E I LFE+ML
Sbjct: 417 ITVSSALVTLYGKCGSIEDAHRLFDEMPF-HDQVSYTALVSGYAQFGKAKETIDLFEKML 475
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G+KP+ +T++GVL+AC+ GLVE+G Y++ M+ H I H+ M+DL R+G L
Sbjct: 476 LKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRL 535
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA FI MP PD + W +LLSACR+ ++++GK AAE LL +P N +Y LC+++
Sbjct: 536 KEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMH 595
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+S G+W + A +R+ M+ VKK G SW++ +N+VH+F +D HP IY K+ +
Sbjct: 596 ASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLN 655
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
++ E G+ PD +SVLHDV + K ML +HSEKLAIAFGLI PE +R++KNLRVC
Sbjct: 656 SKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCV 715
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A KFI K+ R+I+VRDA RFH F G+CSC D+W
Sbjct: 716 DCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 218/464 (46%), Gaps = 66/464 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH +I++ G F + L++ YAK I AK+VFDEM VK + +NT+++
Sbjct: 167 LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLL 226
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ ++ A VF M +RDS++WTT++ + G A+ +F M + V Q+T S
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C AL GK++H++ ++T G + V ++L++MY+K +A+AVF M KN
Sbjct: 287 ILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKN 346
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+++W +MI GY QNG EA+ +F+ M
Sbjct: 347 -------------------------------IISWTAMIVGYGQNGCGEEAVRVFSEMQT 375
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D +KP+ FTL S +S+CANL L+ G Q H + + V +AL++ Y K G +E
Sbjct: 376 D-GIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIE 434
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A ++ ++ + + + +++T L+ GY + G
Sbjct: 435 DAHRLFDE--MPFHDQVSYTALVSGYAQFGKA---------------------------- 464
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSV 449
K+ ++LF M+ +G KPN T +LS S ++ G H+ G
Sbjct: 465 ---KETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDH 521
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+I +YS++G + A + + + W +++ A G
Sbjct: 522 YTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 304/796 (38%), Positives = 445/796 (55%), Gaps = 78/796 (9%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
M+ NP I E YA +LQ K N +G VHA+++ G+ + FL + L+ Y +
Sbjct: 1 MDLTNPDECI---EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ 57
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
T + A+++FD+ M R+ SWT I+ Y
Sbjct: 58 TGCVEDARRMFDK-------------------------------MSERNVFSWTAIMEMY 86
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+G ++ I++F MV + V P F V +C+ L + GK V+ +++ G G
Sbjct: 87 CGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS 146
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V S+L+M+ I GR+D+AR F+++ +
Sbjct: 147 CVKGSILDMF-------------------------------IKCGRMDIARRFFEEIEFK 175
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
DV WN M++GY+ G +AL +F M+ + +KP+ T+AS +SAC NL L+ G++I
Sbjct: 176 DVFMWNIMVSGYTSKGEFKKALNVFRKMVLEG-VKPNSITIASAVSACTNLSLLRHGREI 234
Query: 301 HAYIIRTE-FDATGPVGNALISCYAKVGGVEIAQK---IVEQSGI----SYLNVIAFTTL 352
H Y I+ E D+ VGN+L+ YAK VE+A++ +++Q+ + + L V FT
Sbjct: 235 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQY 294
Query: 353 LDGYIKI---GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
DG + + A +F L RDVV W +++ Q+G + +A++L R M +
Sbjct: 295 GDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 354
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
N T+ + L S LA+L GK+IH +R G + + N+LI MY + G+I +RR+
Sbjct: 355 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 414
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+L+ R + VSW MI HG G +A+ LF++ +G+KP+HIT+ +L+AC+H GL
Sbjct: 415 FDLMPQR-DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGL 473
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+E+G +Y+ MMK + + P +A MVDLL RAG E FIE MP EP+ WGSLL
Sbjct: 474 IEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 533
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
ACR+H N DL + AA L +EP +SG Y + N+YS+ G+WEDAA IR MK GV K
Sbjct: 534 GACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTK 593
Query: 650 TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G SW++++ K+H F V D HP + I KM ++ +IKE+G+VPDT VL DV+ED
Sbjct: 594 PPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDE 653
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
KE L HSEK+A+AFGLIST T LRI+KNLRVC DCHSA KFI K+ R+I++RD
Sbjct: 654 KEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNY 713
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHF G+CSC DYW
Sbjct: 714 RFHHFVDGVCSCGDYW 729
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 290/763 (38%), Positives = 437/763 (57%), Gaps = 66/763 (8%)
Query: 35 VHARIIKCGLHLSVF----LKNS-----LMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
H R C L L VF L+NS +++ Y + S A+ +FD+MP K L SWN +
Sbjct: 42 THMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLM 101
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
L+ YA+ RL A +F+ MP +D VSW ++ Y G A +F M +
Sbjct: 102 LTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSI--- 158
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---VGDEMMAKAV 202
+ +LA+ G L +++ L C N L+ Y K +GD A+ +
Sbjct: 159 -SWNGLLAAYVRSGRLEEARRLFESKSDWELISC----NCLMGGYVKRNMLGD---ARQL 210
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + ++++ SWN ++S + G L AR F++ RDV TW +M+ Y Q+G EA
Sbjct: 211 FDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEAR 270
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M P K ++ N +I+
Sbjct: 271 RVFDEM-------PQKREMSY---------------------------------NVMIAG 290
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ +++ +++ E+ + + N+ ++ ++ GY + GD+ AR +FD + RD V+W A
Sbjct: 291 YAQYKRMDMGRELFEE--MPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAA 348
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY QNGL ++A+ + M R+G N T LS + +A+L+ GKQ+H +R+G
Sbjct: 349 IIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTG 408
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
V NAL+ MY K G I+ A VF + ++ VSW +M+ A+HG G +A+ +F
Sbjct: 409 YEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQ-HKDIVSWNTMLAGYARHGFGRQALTVF 467
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M+ G+KPD IT VGVL+AC+H GL ++G Y++ M + I P H+A M+DLLGR
Sbjct: 468 ESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGR 527
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA N I NMP EPD WG+LL A R+H N++LG+ AAE + +EP NSG Y L
Sbjct: 528 AGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLL 587
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
NLY++ G+W D + +R M+ +GV+KT G+SWV++QNK+H F V D HP++ IY +
Sbjct: 588 SNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFL 647
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ ++K G+V T VLHDVEE+ K+ ML++HSEKLA+AFG+++ P +R+MKNL
Sbjct: 648 EELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNL 707
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCH+AIK I K+V R I+VRD+ R+HHF +G+CSCRDYW
Sbjct: 708 RVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 153/358 (42%), Gaps = 72/358 (20%)
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM- 403
+ + T + +++ G A +FD++ R+ V++ AM+ GY +N A +LF M
Sbjct: 32 HTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP 91
Query: 404 -------------------VREG-------PKPNNYTLSAMLSVSSSLASLDHGKQIH-- 435
+R+ P+ + + +AMLS +D + +
Sbjct: 92 HKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDR 151
Query: 436 -------------ASALRSG---EASSLSVS---------NALITMYSKAGNINAARRVF 470
A+ +RSG EA L S N L+ Y K + AR++F
Sbjct: 152 MPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLF 211
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ I R + +SW +MI AQ G +A +LFE E ++ D T+ ++ A G++
Sbjct: 212 DQIPVR-DLISWNTMISGYAQDGDLSQARRLFE---ESPVR-DVFTWTAMVYAYVQDGML 266
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
++ +R ++ M ++ + M+ + + E MP P++ +W ++S
Sbjct: 267 DEARRVFDEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMIS 320
Query: 591 A-CRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
C +N DL + A L + P +S +++A+ Y+ G +E+A N+ MK G
Sbjct: 321 GYC---QNGDLAQ--ARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 33/202 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH ++++ G + N+L+ Y K I A VF + K + SWNT+L+ YA
Sbjct: 396 LGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYA 455
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G GR A+ +F M+ V P + T+
Sbjct: 456 RHG-----------------------------FGR--QALTVFESMITAGVKPDEITMVG 484
Query: 151 VLASCTALGDLSAGKK-VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL++C+ G G + HS G++ ++++ + G A+ + M +
Sbjct: 485 VLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFE 544
Query: 210 -NVSSWNVVVSLHIHSGRLDLA 230
+ ++W ++ G ++L
Sbjct: 545 PDAATWGALLGASRIHGNMELG 566
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/718 (41%), Positives = 433/718 (60%), Gaps = 43/718 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNR---DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
N+I++ Y + G LD A ++F+ + R D VSW +I+ Y + G+ + A+R+ M
Sbjct: 166 NSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNH 225
Query: 140 QVL---PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
L P T+ ++L +C ++ L GK+VH F V+ GL V V N+L++MYAK
Sbjct: 226 YSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKM 285
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGY 252
A VF+G++ K+V SWN +V+ + G D A + F M I+ DV+TW+++IAGY
Sbjct: 286 NEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGY 345
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+Q G+ FEAL +F M + L+P+ TLAS LS CA++ L GKQ HAY+I+ +
Sbjct: 346 AQKGHGFEALDVFRQM-QLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLN 404
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+++ L+D Y K AR IFDS+
Sbjct: 405 WNDKED--------------------------DLLVLNGLIDMYAKCKSYRVARSIFDSI 438
Query: 373 --RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLASL 428
+D++VV WT M+ GY Q+G DA++LF + ++ KPN +TLS L + L L
Sbjct: 439 EGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGEL 498
Query: 429 DHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G+Q+HA ALR+ E+ L V N LI MYSK+G+I+AAR VF+ + R VSWTS++
Sbjct: 499 RLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRN-VVSWTSLMT 557
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
HG GEEA+ LF++M +LG D IT++ VL AC+H G+V+QG Y++ M I
Sbjct: 558 GYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGIT 617
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+A MVDLLGRAG L EA I+NM +EP V W +LLSA R+H N++LG+ AA K
Sbjct: 618 PGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASK 677
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L + +N G+Y+ L NLY++ +W+D A IR MK+ G++K G SW+Q + F V
Sbjct: 678 LTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFV 737
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HP+ + IYN + + IK+MG+VP T+ LHDV+++ K +L HSEKLA+A+G+
Sbjct: 738 GDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGI 797
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++T +RI KNLR+C DCHSA+ +I ++D EIV+RD++RFHHFKKG CSCR YW
Sbjct: 798 LTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 250/512 (48%), Gaps = 54/512 (10%)
Query: 104 LMPNRDSVSWTTIIVTYN-EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS 162
L+P+ +V W ++ + ++G + + + +M + LP +T VL +C + L
Sbjct: 85 LIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLR 144
Query: 163 AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM---RLKNVSSWNVVVS 219
G VH+ V GL V + NS++ MY + G A +FD + +++++ SW
Sbjct: 145 HGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSW----- 199
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK--PD 277
NS++A Y Q G AL + M SLK PD
Sbjct: 200 --------------------------NSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPD 233
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
TL + L ACA++ L+ GKQ+H + +R VGNAL+S YAK + A K+ E
Sbjct: 234 AITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFE 293
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLN 393
GI +V+++ ++ GY +IG A +F +++ DV+ W+A++ GY Q G
Sbjct: 294 --GIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHG 351
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-------SGEASS 446
+A+++FR M G +PN TL+++LS +S+ +L +GKQ HA ++ + +
Sbjct: 352 FEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDD 411
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQLFERM 505
L V N LI MY+K + AR +F+ I + + V+WT MI AQHG +A++LF ++
Sbjct: 412 LLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQI 471
Query: 506 L--ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+ +KP+ T L AC G + G++ + ++D+ ++
Sbjct: 472 FKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKS 531
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
G + A +NM L +VV+W SL++ +H
Sbjct: 532 GDIDAARAVFDNMKLR-NVVSWTSLMTGYGMH 562
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 235/499 (47%), Gaps = 82/499 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH ++ GL VF+ N+L++ YAK ++ A KVF+ + K + SWN +++ Y++
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G D A +F +M D ++W+ +I Y + G A+ +F +M + P T
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-------VTNSLLNMYAKVGDEMMAK 200
+ S+L+ C ++G L GK+ H++V+K L+ N V N L++MYAK +A+
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
++FD + K +++VVTW MI GY+Q+G +
Sbjct: 433 SIFDSIEGK-----------------------------DKNVVTWTVMIGGYAQHGEAND 463
Query: 261 ALGMFANMLKD-SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA-TGPVGNA 318
AL +FA + K +SLKP+ FTL+ L ACA L +L+LG+Q+HAY +R E ++ VGN
Sbjct: 464 ALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNC 523
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI Y+K G ++ A+ + + + NV+++T+L
Sbjct: 524 LIDMYSKSGDIDAARAVFDNMKLR--NVVSWTSL-------------------------- 555
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK-QIHAS 437
+ GY +G ++A+ LF M + G + T +L S +D G H
Sbjct: 556 -----MTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDM 610
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---L 494
G ++ + +AG +N A + + V W +++ A H L
Sbjct: 611 VKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIEL 670
Query: 495 GEEAIQLFERMLELGIKPD 513
GE A ++ ELG + D
Sbjct: 671 GEYAA---SKLTELGAEND 686
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 167/372 (44%), Gaps = 21/372 (5%)
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C + L +H Y T T P+ + L C + ++A + + G + +
Sbjct: 6 CGSYLSRILITSVHFYSTFTTSPPTIPLISLLRQCKTLINA-KLAHQQIFVHGFTEM--- 61
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
F+ + YI+ G A + L V W A++ + GL D + + M R
Sbjct: 62 -FSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G P++YT +L + SL HG +HA +G S++ + N+++ MY + G ++
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
Query: 466 ARRVFNLIHWR--QETVSWTSMIVALAQHGLGEEAIQLFERM---LELGIKPDHITYVGV 520
A ++F+ + R ++ VSW S++ A Q G A+++ RM L ++PD IT V +
Sbjct: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L AC ++ G++ + + A +V + + + EA E + +
Sbjct: 241 LPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA-LVSMYAKCSKMNEANKVFEGIK-KK 298
Query: 581 DVVAWGSLLSACRVHKNLD----LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
DVV+W ++++ + D L K+ E+ + ++ +SA+ Y+ G +A
Sbjct: 299 DVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVIT---WSAVIAGYAQKGHGFEAL 355
Query: 637 NIRKSMKYVGVK 648
++ + M+ G++
Sbjct: 356 DVFRQMQLYGLE 367
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/844 (35%), Positives = 457/844 (54%), Gaps = 108/844 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +++ K+R GK+VH ++ + G+ + ++L NSL+NFY+K E ++ A++VF M
Sbjct: 59 YGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMT 118
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVF------NLMPNR--------------------- 108
++ + +W+++++AYA A + F N+ PNR
Sbjct: 119 LRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRK 178
Query: 109 ------------DSVSWTTIIVTYNEIG-------------------------------R 125
D T +I Y++ G +
Sbjct: 179 IHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRK 238
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
A ++ +M+Q + P T S+L SC L+ G+++HS + + GL + V N+
Sbjct: 239 LNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANA 298
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+ MY K A+ +FD M ++V SW+ +
Sbjct: 299 LITMYCKCNSVQEAREIFDRMSKRDVISWSAM---------------------------- 330
Query: 246 NSMIAGYSQNGY-DFEALGMFANML---KDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
IAGY+Q+GY D E++ +L + + P+K T S L AC L+ G+QIH
Sbjct: 331 ---IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
A + + F+ + A+ + YAK G + A+++ S ++ NV+A+T+ L YIK GD
Sbjct: 388 AELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVF--SKMANKNVVAWTSFLSMYIKCGD 445
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A ++F + R+VV+W M+ GY QNG EL SM EG +P+ T+ +L
Sbjct: 446 LSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEA 505
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+LA L+ GK +HA A++ G S V+ +LI MYSK G + AR VF+ + R +TV+
Sbjct: 506 CGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR-DTVA 564
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +M+ QHG G EA+ LF+RML+ + P+ IT V++AC+ GLV++G+ + MM+
Sbjct: 565 WNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQ 624
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
K+ P H+ MVDLLGRAG LQEA FI++MP EPD+ W +LL AC+ H N+ L
Sbjct: 625 EDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLA 684
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
+ AA +L +EP + Y L N+Y+ G+W+D+ +R+ M G+KK +G S ++I +
Sbjct: 685 ERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGR 744
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
+H F ED HP+ DAI+ ++ + E+KE G+ PD VLHDV++ KE+ L HHSEKL
Sbjct: 745 IHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKL 804
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AIA+GL+ TP T +RIMKNLRVC DCH+A KFI K+ REIV RDA RFH+F G CSC
Sbjct: 805 AIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSC 864
Query: 782 RDYW 785
D+W
Sbjct: 865 GDFW 868
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 221/472 (46%), Gaps = 73/472 (15%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR + AI++ + Q +L T V+ C GK VH + + G+ + +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
NSL+N Y+K D A+ VF M L+ DVV
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLR-------------------------------DVV 123
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TW+SMIA Y+ N + +A F M D++++P++ T S L AC N L+ G++IH
Sbjct: 124 TWSSMIAAYAGNNHPAKAFDTFERM-TDANIEPNRITFLSILKACNNYSILEKGRKIHTI 182
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ + V ALI+ Y+K G + +A +
Sbjct: 183 VKAMGMETDVAVATALITMYSKCGEISVACE----------------------------- 213
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+F + +R+VV+WTA++ Q+ +A EL+ M++ G PN T ++L+ +
Sbjct: 214 ----VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ +L+ G++IH+ G + + V+NALITMY K ++ AR +F+ + R + +SW+
Sbjct: 270 TPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKR-DVISWS 328
Query: 484 SMIVALAQHGLG-----EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+MI AQ G +E QL ERM G+ P+ +T++ +L ACT G +EQG++ +
Sbjct: 329 AMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHA 388
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+ V + S ++ ++ + G + EA M +VVAW S LS
Sbjct: 389 ELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLS 438
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 300/816 (36%), Positives = 455/816 (55%), Gaps = 66/816 (8%)
Query: 32 GKLVHAR-IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G++ AR + + +V N++++ Y + + A+K+FDEMP K + SWN++++ Y
Sbjct: 247 GRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYC 306
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
R+ A E+F+ MP R+SVSW +I Y I + A +FV+M + P Q
Sbjct: 307 HCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVV 366
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++ T L DL + +KTG G V V +++LN Y + G +A F+ M +N
Sbjct: 367 VLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERN 426
Query: 211 VSSWNVVVSLHIHSGRLD-------------------------------LARAQFDQMIE 239
SW +++ GRLD AR FD+++
Sbjct: 427 EYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILN 486
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANM------------------------------L 269
+VV WN++IAGY+QNG EA +F M L
Sbjct: 487 PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIEL 546
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
S P + S LSACAN+ +++G+ IH+ I+T V N LIS YAK G V
Sbjct: 547 HRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNV 606
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E + I + +++ +L+ G + + AR +F+ + RDVV+WTA++ Y Q
Sbjct: 607 EDGSHVFRT--IRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQ 664
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G + A++LF M+ G KPN T++++LS +L ++ G+Q HA + G + L V
Sbjct: 665 AGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFV 724
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N+LITMY K G VF + + ++W +++V AQ+GLG+EAI++FE+M G
Sbjct: 725 GNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEG 782
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I PD ++++GVL AC+H GLV++G ++N M + I P H+ MVDLLGRAG L EA
Sbjct: 783 ILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEA 842
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
IENMP++PD V W +LL ACR+H+N++LG+ AE+L + S Y L NL++S
Sbjct: 843 EALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQ 902
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G W+ A IRK MK G+ K G SW+Q++NK+H F D H Q + IY+ + + +
Sbjct: 903 GMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCF 962
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+ G++PDT VLHDVEE+ K+ L +HSEKLA+ FG++STP + ++I+KNLR+C DCH
Sbjct: 963 RATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCH 1022
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +KF+ K+ R+I++RD RFHHF+ G CSC DYW
Sbjct: 1023 TFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 178/648 (27%), Positives = 301/648 (46%), Gaps = 114/648 (17%)
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
E P L NT + + GR++ A VFN M RD VSW ++I Y++ G+ A +
Sbjct: 165 ETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLL 224
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F V + T T +L G + ++V + + V N++++ Y +
Sbjct: 225 FDAFVGKNIR----TWTILLTGYAKEGRIEEAREVFESMTERN----VVSWNAMISGYVQ 276
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
GD A+ +FD M KNV+SWN VV+ + H R+ AR FDQM ER+ V+W MI+GY
Sbjct: 277 NGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGY 336
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+EA +F M + + +PD+ LSA L+ L+L + I+T ++
Sbjct: 337 VHISDYWEAWDVFVKMCRTVA-RPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGD 395
Query: 313 GPVGNALISCYAKVGGVEIA----QKIVEQSGISYLNVIAF------------------- 349
VG+A+++ Y + G +++A + + E++ S+ +IA
Sbjct: 396 VVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPE 455
Query: 350 ------TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
T ++ Y ++G I AR IFD + + +VVAW A++ GY QNG+ K+A +LF+ M
Sbjct: 456 QTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM 515
Query: 404 V-------------------------------REGPKPNNYTLSAMLSVSSSLASLDHGK 432
R G P++ + ++ LS +++ ++ G+
Sbjct: 516 PVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGR 575
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH------W----------- 475
IH+ A+++G + V N LI+MY+K GN+ VF I W
Sbjct: 576 VIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENY 635
Query: 476 -------------RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+++ VSWT++I A Q G GE A+ LF ML GIKP+ +T +L+
Sbjct: 636 MLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLS 695
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEP 580
AC + G ++ G++++ + + K+ F S++ + + G ++ + E MP E
Sbjct: 696 ACGNLGAIKLGEQFHAL---IFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EH 750
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE-----PDNSGAYSALC 623
D++ W ++L C + LGK A + +E PD LC
Sbjct: 751 DLITWNAVLVGCAQN---GLGKEAIKIFEQMEVEGILPDQMSFLGVLC 795
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 136/260 (52%), Gaps = 33/260 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+++H+ IK G + ++ N L++ YAK ++ VF + VK SWN+++S +
Sbjct: 573 IGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLS 632
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ LD A VF MP RD VSWT II Y + G + A+ +F++M+ + P Q TVTS
Sbjct: 633 ENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTS 692
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L++C LG + G++ H+ + K G + V NSL+ MY K G E DG +
Sbjct: 693 LLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYE-------DGFCV-- 743
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
F++M E D++TWN+++ G +QNG EA+ +F M
Sbjct: 744 -----------------------FEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEV 780
Query: 271 DSSLKPDKFTLASTLSACAN 290
+ L PD+ + L AC++
Sbjct: 781 EGIL-PDQMSFLGVLCACSH 799
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/538 (22%), Positives = 245/538 (45%), Gaps = 100/538 (18%)
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+ + ++G A+ VF+ M ++V SWN +++ + +G++D AR FD + +++
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TW ++ GY++ G EA +F +M + + +
Sbjct: 235 TWTILLTGYAKEGRIEEAREVFESMTERNVVS---------------------------- 266
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
NA+IS Y + G ++ A+K+ ++ + NV ++ +++ GY +
Sbjct: 267 ------------WNAMISGYVQNGDLKNARKLFDE--MPEKNVASWNSVVTGYCHCYRMS 312
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR +FD + +R+ V+W M+ GY +A ++F M R +P+ +LS +
Sbjct: 313 EARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT 372
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
L L+ + A+++G + V +A++ Y++ G+++ A F + R E SWT
Sbjct: 373 GLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNE-YSWT 431
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI A AQ G ++AIQL+ER+ E + T ++TA G +++ + ++ + N
Sbjct: 432 TMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILN- 486
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE------------------------ 579
P + +++ + G+L+EA + + MP++
Sbjct: 487 ----PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALEL 542
Query: 580 ----------PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD---NSGAYSALCNLY 626
P ++ S LSAC ++++G++ L I+ NS + L ++Y
Sbjct: 543 LIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHS--LAIKTGCQFNSYVMNGLISMY 600
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+ CG ED +++ ++++ VK T SW + + + E+++ ++ KM K
Sbjct: 601 AKCGNVEDGSHVFRTIR---VKDT--VSWNSLISGLS----ENYMLDDARVVFEKMPK 649
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 286/755 (37%), Positives = 451/755 (59%), Gaps = 72/755 (9%)
Query: 39 IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT------LCSWNTILSAYAK- 91
+++CG + + + + + E+IS K +F + +KT +C ++ + K
Sbjct: 33 MLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFL-LKTGYFESDVCVGCALIDMFVKG 91
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L+ A +VF+ MP+R+ V+WT +I + ++G ++A+ +F++MV +P +FT++ V
Sbjct: 92 NGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGV 151
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++C +G LS G++ H V+K+GL V V SL++MYAK
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKC------------------ 193
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG-YDFEALGMFANMLK 270
+ G +D AR FD+M +V++W ++I GY Q+G D EA+ +F M++
Sbjct: 194 ----------VADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+KP+ FT +S L ACANL + LG+Q++A +++ + VGN+LIS Y++ G +E
Sbjct: 244 -GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
AR+ FD L ++++V++ ++ Y ++
Sbjct: 303 ---------------------------------NARKAFDVLFEKNLVSYNTIVNAYAKS 329
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+++A ELF + G N +T +++LS +SS+ ++ G+QIH+ L+SG S+L +
Sbjct: 330 LNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHIC 389
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NALI+MYS+ GNI AA +VFN + +SWTSMI A+HG A++ F +MLE G+
Sbjct: 390 NALISMYSRCGNIEAAFQVFNEM-GDGNVISWTSMITGFAKHGFATRALETFHKMLEAGV 448
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
P+ +TY+ VL+AC+H GL+ +G +++ MK H I P H+A +VDLLGR+G L+EA
Sbjct: 449 SPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAM 508
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+ +MP + D + + L ACRVH N+DLGK AAE +L +P + AY L NL++S G
Sbjct: 509 ELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAG 568
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+WE+ A IRK MK + K G SW++++NKVH F V D HPQ IY+++ ++ +IK
Sbjct: 569 QWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIK 628
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E+G++P T VLHDVEE+ KEQ L HSEK+A+A+G IST + +R+ KNLRVC DCH+
Sbjct: 629 ELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHT 688
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K+ + +EIV+RDA RFHHFK G CSC DYW
Sbjct: 689 AFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 244/493 (49%), Gaps = 72/493 (14%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
RD VSW+ +I Y + AI F +M++ P ++ T V +C+ ++S GK +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 168 HSFVVKTG-LSGCVNVTNSLLNMYAKV-GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
F++KTG V V +L++M+ K GD A VFD M +N
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRN--------------- 109
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
VVTW MI + Q G+ +A+ +F +M+ S PD+FTL+ +
Sbjct: 110 ----------------VVTWTLMITRFQQLGFSRDAVDLFLDMVL-SGYVPDRFTLSGVV 152
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV---GGVEIAQKIVEQSGIS 342
SACA + L LG+Q H ++++ D VG +L+ YAK G V+ A+K+ ++ +
Sbjct: 153 SACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH 212
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
NV+++T ++ GY++ G G +++A+ELF
Sbjct: 213 --NVMSWTAIITGYVQSG------------------------------GCDREAIELFLE 240
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
MV+ KPN++T S++L ++L+ + G+Q++A ++ AS V N+LI+MYS+ GN
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ AR+ F+++ + + VS+ +++ A A+ EEA +LF + G + T+ +L+
Sbjct: 301 MENARKAFDVL-FEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLS 359
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+ G + +G++ ++ + K +++ + R G ++ A+ M + +V
Sbjct: 360 GASSIGAIGKGEQIHSRILK-SGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNV 417
Query: 583 VAWGSLLSACRVH 595
++W S+++ H
Sbjct: 418 ISWTSMITGFAKH 430
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 188/358 (52%), Gaps = 41/358 (11%)
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
+RD+V+W+++I+ Y+ N FEA+ F +ML + P+++ AC+N E + LGK
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDML-ECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 299 QIHAYIIRTE-FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
I ++++T F++ VG ALI + K
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGN------------------------------ 92
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
GD+ A ++FD + DR+VV WT M+ ++Q G ++DAV+LF MV G P+ +TLS
Sbjct: 93 --GDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSG 150
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRVFNLIH 474
++S + + L G+Q H ++SG + V +L+ MY+K G+++ AR+VF+ +
Sbjct: 151 VVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP 210
Query: 475 WRQETVSWTSMIVALAQH-GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+SWT++I Q G EAI+LF M++ +KP+H T+ VL AC + + G
Sbjct: 211 -VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLG 269
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++ Y ++ + ++ S++ + R G ++ A + + E ++V++ ++++A
Sbjct: 270 EQVYALVVKM-RLASINCVGNSLISMYSRCGNMENARKAFDVL-FEKNLVSYNTIVNA 325
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 71/307 (23%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P F ++ +L++ + ++G+ V+A ++K L + NSL++ Y++ ++ A+
Sbjct: 246 VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENAR 305
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
K FD + K L S+NTI++AYAK + A E+FN + G N
Sbjct: 306 KAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEG---------------AGTGVN 350
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A FT S+L+ +++G + G+++HS ++K+G +++ N+L++
Sbjct: 351 A----------------FTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALIS 394
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY++ G+ A VF+ M NV SW SM
Sbjct: 395 MYSRCGNIEAAFQVFNEMGDGNVISW-------------------------------TSM 423
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN-------LEKLKLGKQIH 301
I G++++G+ AL F ML ++ + P++ T + LSAC++ L+ K K H
Sbjct: 424 ITGFAKHGFATRALETFHKML-EAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEH 482
Query: 302 AYIIRTE 308
+ R E
Sbjct: 483 GIVPRME 489
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 99/213 (46%), Gaps = 35/213 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+RI+K G ++ + N+L++ Y++ +I A +VF+EM + SW ++++ +AK
Sbjct: 370 GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAK 429
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A E F+ +M++ V P + T +V
Sbjct: 430 HGFATRALETFH-------------------------------KMLEAGVSPNEVTYIAV 458
Query: 152 LASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L++C+ +G +S G K S V+ G+ + ++++ + G A + + M K
Sbjct: 459 LSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKA 518
Query: 210 -NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ + + +H G +DL + + ++E+D
Sbjct: 519 DALVLRTFLGACRVH-GNMDLGKHAAEMILEQD 550
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 297/760 (39%), Positives = 440/760 (57%), Gaps = 104/760 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK VH + IKCG V + SL++ Y KTES+ ++VFDEM VK +
Sbjct: 110 VGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV----------- 158
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VSWT+++ Y + G + A+++F +M + + P FT +
Sbjct: 159 --------------------VSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAA 198
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL A G + G +VH+ V+K+GL + V NS++NMY+K
Sbjct: 199 VLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK------------------ 240
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
SL + A+A FD M R+ V+WNSMIAG+ NG D EA +F M +
Sbjct: 241 --------SLMVSD-----AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM-R 286
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR--TEFDATGPVGNALISCYAKVGG 328
+K + A+ + CAN++++ KQ+H +I+ ++FD
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFD------------------ 328
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD-RDVVAWTAMLVGY 387
LN+ T L+ Y K +I A ++F + ++VV+WTA++ GY
Sbjct: 329 ---------------LNIK--TALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGY 371
Query: 388 EQNGLNKDAVELFRSMVRE-GPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRSGEAS 445
QNG A+ LF M RE G +PN +T S++L + ++ AS++ GKQ H+ +++SG ++
Sbjct: 372 VQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 431
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+L VS+AL+TMY+K GNI +A VF ++ VSW SMI AQHG G++++++FE M
Sbjct: 432 ALCVSSALVTMYAKRGNIESANEVFKR-QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 490
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
++ D IT++GV++ACTH GLV +GQRY+++M + I PT H++ MVDL RAG+
Sbjct: 491 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGM 550
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
L++A + I MP W +LL+ACRVH N+ LG++AAEKL+ ++P +S AY L N+
Sbjct: 551 LEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNI 610
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y++ G W++ A +RK M VKK G+SW++++NK F D HPQ D IY K+ ++
Sbjct: 611 YATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEEL 670
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
+K+ G+ PDT VLHDVEE+ KE +L HSE+LAIAFGLI+TP T ++I+KNLRVC
Sbjct: 671 SIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVC 730
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+ IK I K+ R+IVVRD+ RFHHFK G CSC DYW
Sbjct: 731 GDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 244/502 (48%), Gaps = 77/502 (15%)
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
++F+ P + ++ ++ + K A+ +F+ + + +++ VL C L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
D GK+VH +K G V+V SL++MY K + VFD MR+KNV SW
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSW----- 161
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
S++AGY QNG + +AL +F+ M + +KP+ F
Sbjct: 162 --------------------------TSLLAGYRQNGLNEQALKLFSQM-QLEGIKPNPF 194
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T A+ L A ++ G Q+H +I++ D+T VGN++++ Y+K
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK-------------- 240
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
+L+ + A+ +FDS+ +R+ V+W +M+ G+ NGL+ +A EL
Sbjct: 241 -----------SLM--------VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M EG K + ++ + +++ + KQ+H +++G L++ AL+ YSK
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYV 518
I+ A ++F ++H Q VSWT++I Q+G + A+ LF +M E G++P+ T+
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401
Query: 519 GVLTACTH-GGLVEQGQRYYNMMKNVHKIKPTPSHF----ASMVDLLGRAGLLQEAYNFI 573
VL AC VEQG+++++ IK S+ +++V + + G ++ A N +
Sbjct: 402 SVLNACAAPTASVEQGKQFHSC-----SIKSGFSNALCVSSALVTMYAKRGNIESA-NEV 455
Query: 574 ENMPLEPDVVAWGSLLSACRVH 595
++ D+V+W S++S H
Sbjct: 456 FKRQVDRDLVSWNSMISGYAQH 477
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 4/236 (1%)
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
++++FD + + +L + +N NK+A+ LF + R G + +LS +L V
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L GKQ+H ++ G +SV +L+ MY K ++ RVF+ + + VSWTS
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN-VVSWTS 163
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++ Q+GL E+A++LF +M GIKP+ T+ VL G VE+G + + M+
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-S 222
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ T SMV++ ++ ++ +A ++M + V+W S+++ V LDL
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGF-VTNGLDL 276
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 299/755 (39%), Positives = 438/755 (58%), Gaps = 68/755 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTES--ISYAKKVFDEMPVKTLCSWNTILSAYA 90
K +HA IIK GLH ++F + L+ F A + S ISYA +F+ + L WN+++ +
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+L P A+ FV M+ V P +T
Sbjct: 106 -----------MSLSPAL--------------------ALVFFVRMIYSGVEPNSYTFPF 134
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L SC L GK++H+ V+K G V + SL+NMYA+ G+ A+ VFD ++
Sbjct: 135 LLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD 194
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
S+ +++ + G +D AR FD+M +DVV+WN+MIAGY+Q G EAL +F +M K
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK 254
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+++ P++ T+ S LSACA L LG + ++I
Sbjct: 255 -ANVPPNESTIVSVLSACAQSNALDLGNSMRSWI-------------------------- 287
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
E G+ N+ L+D Y K GD+ AR +FD + +RDV++W M+ GY
Sbjct: 288 ------EDRGLCS-NLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHM 340
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
K+A+ LFR M+ G +P T ++L + L ++D GK IHA ++ + S S+S
Sbjct: 341 CSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLS 400
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+LI +Y+K GNI AAR+VF+ + + SW +MI LA HG ++A +LF +M GI
Sbjct: 401 TSLIDLYAKCGNIVAARQVFDGMKIKS-LASWNAMICGLAMHGQADKAFELFSKMSSDGI 459
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+P+ IT+VG+L+AC H GLV+ GQ++++ M +KI P H+ M+DLLGRAGL +EA
Sbjct: 460 EPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAE 519
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+ ++NM ++PD WGSLL ACR H ++LG++ AE+L +EPDN GAY L N+Y+ G
Sbjct: 520 SLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAG 579
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KW+D A IR + G+KK G + +++ N VH F V D +HPQ + IY + ++ +++K
Sbjct: 580 KWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLK 639
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
GFV DT+ VL+D++E+ KE L HHSEKLAIAFGLIST T +RI+KNLRVC +CHS
Sbjct: 640 VFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHS 699
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K I K+ +REI+ RD RFHHFK G CSC DYW
Sbjct: 700 ATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 239/500 (47%), Gaps = 68/500 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S K + GK +HA ++K G VF+ SL+N YA++ ++ A+ VFD+
Sbjct: 132 FPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSN 191
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ S+ +++ YA G +D A ++F+ MP +D VSW +I Y ++GR K A+ +F +
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFED 251
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V P + T+ SVL++C L G + S++ GL + + N+L++MY+K GD
Sbjct: 252 MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGD 311
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD M ++V SWNV MI GY+
Sbjct: 312 LQTARELFDDMLERDVISWNV-------------------------------MIGGYTHM 340
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F ML S ++P + T S L +CA+L + LGK IHAYI + + +
Sbjct: 341 CSYKEALALFREMLA-SGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSL 399
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+LI YAK G N++A AR++FD ++ +
Sbjct: 400 STSLIDLYAKCG-----------------NIVA----------------ARQVFDGMKIK 426
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ +W AM+ G +G A ELF M +G +PN T +LS +D G+Q
Sbjct: 427 SLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFF 486
Query: 436 ASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+S ++ + S S +I + +AG A + + + + W S++ A HG
Sbjct: 487 SSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGR 546
Query: 495 GEEAIQLFERMLELGIKPDH 514
E + ER+ EL +PD+
Sbjct: 547 VELGELVAERLFEL--EPDN 564
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 158/340 (46%), Gaps = 72/340 (21%)
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
LS C + ++ KQIHA+II+T + N L + K++E S +S
Sbjct: 36 LSKC---QSIRTFKQIHAHIIKT------GLHNTLFAL----------SKLIEFSAVS-- 74
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+ GDI A +F+S+ + ++ W +M+ G + A+ F M+
Sbjct: 75 -------------RSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMI 121
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
G +PN+YT +L + LAS GKQIHA L+ G S + + +LI MY+++G +N
Sbjct: 122 YSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMN 181
Query: 465 AARRVFNLIHWR------------------------------QETVSWTSMIVALAQHGL 494
A+ VF+ ++R ++ VSW +MI AQ G
Sbjct: 182 NAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGR 241
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
+EA+ LFE M + + P+ T V VL+AC ++ G N M++ + + S+
Sbjct: 242 SKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG----NSMRSWIEDRGLCSNLK 297
Query: 555 ---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++D+ + G LQ A ++M LE DV++W ++
Sbjct: 298 LVNALIDMYSKCGDLQTARELFDDM-LERDVISWNVMIGG 336
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 52/244 (21%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P + +S L AHL +L GK +HA I K +S L SL++ YAK +
Sbjct: 360 PTEITFLSILPSCAHLGAIDL-------GKWIHAYINKNFNSVSTSLSTSLIDLYAKCGN 412
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A++VFD M +K+L SWN ++ A G+ D A E+F+
Sbjct: 413 IVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS-------------------- 452
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV-------KTGL 176
+M D + P + T +L++C G + G++ S +V K+
Sbjct: 453 -----------KMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQH 501
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFD 235
GC ++++ + G A+++ M +K + + W ++ GR++L +
Sbjct: 502 YGC------MIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAE 555
Query: 236 QMIE 239
++ E
Sbjct: 556 RLFE 559
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 295/762 (38%), Positives = 444/762 (58%), Gaps = 69/762 (9%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM---PVKTLCSWNTILSAYAKQ 92
HA + + G +VF+ N++++ Y K ++ +A +FD++ ++ L SWN+++SAY
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
+ A +F+ M R +S P ++ ++L
Sbjct: 342 SDANTALALFHKMTTRHLMS------------------------------PDVISLVNIL 371
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C +L G++VH F +++GL V V N++++MYAK G A VF M+ K+V
Sbjct: 372 PACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVV 431
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
SWN +V+ + +GRL+ A + F++M IE DVVTW ++I GY+Q G EAL +F M
Sbjct: 432 SWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQM 491
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
D +P+ TL S LSAC ++ L GK+ H Y I+ + GP
Sbjct: 492 C-DCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGP-------------- 536
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAMLVG 386
G L VI L+D Y K AR++FDS+ +DRDVV WT M+ G
Sbjct: 537 ---------DPGADDLKVI--NGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGG 585
Query: 387 YEQNGLNKDAVELFRSMVR--EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y Q+G +A++LF M + + KPN++TLS L + LA+L G+Q+HA LR+
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG 645
Query: 445 S-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
S L V+N LI MYSK+G+++ A+ VF+ + R VSWTS++ HG GE+A+++F+
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQR-NAVSWTSLMTGYGMHGRGEDALRVFD 704
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M ++ + PD IT++ VL AC+H G+V+ G ++N M + P P H+A MVDL GRA
Sbjct: 705 EMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRA 764
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L EA I MP+EP V W +LLSACR+H N++LG+ AA +LL +E N G+Y+ L
Sbjct: 765 GRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLS 824
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y++ +W+D A IR +MK G+KK G SW+Q + V F V D HPQ IY +A
Sbjct: 825 NIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLA 884
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ IK +G+VP T+ LHDV+++ K +L HSEKLA+A+G+++ +RI KNLR
Sbjct: 885 DLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLR 944
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+C DCHSAI +I K+++ EI++RD++RFHHFK G CSC+ YW
Sbjct: 945 ICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 242/530 (45%), Gaps = 102/530 (19%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
+P+ SL++ L A L S G+ VH I+ GL VF+ N++++ YAK
Sbjct: 361 SPDVISLVNILPACASLAAS-------LRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCG 413
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIV 118
+ A KVF M K + SWN +++ Y++ GRL+ A +F M D V+WT +I
Sbjct: 414 KMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVIT 473
Query: 119 TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK--TGL 176
Y + G+ A+ +F +M P T+ S+L++C ++G L GK+ H + +K L
Sbjct: 474 GYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNL 533
Query: 177 SGC------VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
G + V N L++MYAK +A+ +FD + K
Sbjct: 534 DGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPK--------------------- 572
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACA 289
+RDVVTW MI GY+Q+G AL +F+ M K D S+KP+ FTL+ L ACA
Sbjct: 573 --------DRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACA 624
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGP-VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
L L+ G+Q+HAY++R + + V N LI Y+K G V+ AQ + + + N ++
Sbjct: 625 RLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDN--MPQRNAVS 682
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRD----RDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+T+L+ GY G A R+FD +R D + + +L +G+ + F M
Sbjct: 683 WTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMS 742
Query: 405 RE---GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
++ P P +Y ++ ++ +AG
Sbjct: 743 KDFGVDPGPEHYA-------------------------------------CMVDLWGRAG 765
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERMLEL 508
+ A ++ N + V W +++ A H LGE A R+LEL
Sbjct: 766 RLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAA---NRLLEL 812
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 278/587 (47%), Gaps = 93/587 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK--TLCSWNTILSAY 89
KL+H + I GL L +L+ Y + S +YA + + +P ++ WN ++
Sbjct: 177 AKLLHQQSIMQGLLFH--LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIR-- 232
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ L +VF L S+ WT P +T
Sbjct: 233 -RALHLGSPRDVFTLYRQMKSLGWT----------------------------PDHYTFP 263
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM--- 206
V +C L LS G +H+ V ++G + V V N++++MY K G A +FD +
Sbjct: 264 FVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHR 323
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
++++ SWN VVS ++ + + A A F +M R +++
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMS---------------------- 361
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
PD +L + L ACA+L G+Q+H + IR+ VGNA++ YAK
Sbjct: 362 ---------PDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKC 412
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTA 382
G +E A K+ ++ + + +V+++ ++ GY + G + A +F+ + + DVV WTA
Sbjct: 413 GKMEEANKVFQR--MKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTA 470
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-- 440
++ GY Q G +A+++FR M G +PN TL ++LS S+ +L HGK+ H A++
Sbjct: 471 VITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFI 530
Query: 441 ------SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHG 493
A L V N LI MY+K + AR++F+ + + ++ V+WT MI AQHG
Sbjct: 531 LNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHG 590
Query: 494 LGEEAIQLFERMLEL--GIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTP 550
A+QLF M ++ IKP+ T L AC + G++ + +++N + +
Sbjct: 591 DANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG---SV 647
Query: 551 SHFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
F + ++D+ ++G + A +NMP + + V+W SL++ +H
Sbjct: 648 MLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMH 693
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 227/559 (40%), Gaps = 134/559 (23%)
Query: 125 RFKNAIRMFVEM--VQDQVLPTQFTVTSVLASC-----TALGD---LSAGKKVHSFVVKT 174
R++ +I M + ++ ++L +QFT T +L SC TAL + L+ K +H +
Sbjct: 129 RYRCSISMLLRCFPIKSKLLQSQFTNTRLL-SCATIPITALKECNSLAHAKLLHQQSIMQ 187
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS----WNVVVSLHIHSGRLDLA 230
GL ++ +L+ Y + A A+ RL S WN ++ +H G
Sbjct: 188 GL--LFHLATNLIGTY--IASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGS---- 239
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
RDV T Y Q +K PD +T ACAN
Sbjct: 240 --------PRDVFTL------YRQ--------------MKSLGWTPDHYTFPFVFKACAN 271
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
L L LG +HA + R+ F + V NA++S Y K G + A
Sbjct: 272 LSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHN---------------- 315
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDR---DVVAWTAMLVGYEQNGLNKDAVELFRSM-VRE 406
+FD L R D+V+W +++ Y A+ LF M R
Sbjct: 316 -----------------MFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRH 358
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P+ +L +L +SLA+ G+Q+H ++RSG + V NA++ MY+K G + A
Sbjct: 359 LMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEA 418
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+VF + ++ + VSW +M+ +Q G E A+ LFERM E I+ D +T+ V+T
Sbjct: 419 NKVFQRMKFK-DVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVIT---- 473
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
G ++GQ + F M D R P+VV
Sbjct: 474 -GYAQRGQGCEAL-----------DVFRQMCDCGSR-----------------PNVVTLV 504
Query: 587 SLLSACRVHKNLDLGK----IAAEKLLLIEPDNSGA-----YSALCNLYSSCGKWEDAAN 637
SLLSAC L GK A + +L ++ + GA + L ++Y+ C E A
Sbjct: 505 SLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVA-- 562
Query: 638 IRKSMKYVGVKKTQGFSWV 656
RK V K +W
Sbjct: 563 -RKMFDSVSPKDRDVVTWT 580
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/690 (40%), Positives = 422/690 (61%), Gaps = 43/690 (6%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL S L+SR+ +LVHARI+ + +F++N L++ Y K + + A+K+FD MP
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ +WN+++S K G LD A +F MP D SW +++ + + RF+ ++ FV+
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++ L +++ S L++C L DL+ G +VH+ V K+ S V + ++L++MY+K G
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF GM IER++VTWNS+I Y QN
Sbjct: 198 VACAEEVFSGM-------------------------------IERNLVTWNSLITCYEQN 226
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGP 314
G EAL +F M+ DS L+PD+ TLAS +SACA+L LK G QIHA +++T +F
Sbjct: 227 GPASEALEVFVRMM-DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+GNAL+ YAK V A+++ ++ +S NV++ T+++ GY + + AR +F +
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDR--MSIRNVVSETSMVSGYARAASVKAARFMFSKMTQ 343
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
R+VV+W A++ GY QNG N++A+ LFR + RE P +YT +LS ++LA L G+Q
Sbjct: 344 RNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQA 403
Query: 435 HASALR------SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
H L+ SG S + V N+LI MY K G+I RVF + R + VSW ++IV
Sbjct: 404 HTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER-DCVSWNAIIVG 462
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQ+G G EA+Q+F +ML G KPDH+T +GVL AC+H GLVE+G+ Y+ M+ H + P
Sbjct: 463 YAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIP 521
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ MVDLLGRAG L EA N IE MP+ PD V WGSLL+AC+VH N+++GK AAEKL
Sbjct: 522 LKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKL 581
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L I+P NSG Y L N+Y+ G+W D +RK M+ GV K G SW++++++VHVF V+
Sbjct: 582 LEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVK 641
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDT 698
D HP R IY+ + + +++K +G++PD
Sbjct: 642 DKSHPHRKQIYSVLKMLTEQMKRVGYIPDA 671
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 237/490 (48%), Gaps = 71/490 (14%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+V+D LP +L SC + VH+ ++ T S + + N L+++Y K
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD M +N +WN ++S+ SG LD A F M E D +WNSM++G++Q+
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
E+L F M ++ L ++++ S LSACA L L +G Q+HA + ++ + +
Sbjct: 126 DRFEESLEYFVKMHREDFL-LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYM 184
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G+ALI Y+K G V A++ +F + +R
Sbjct: 185 GSALIDMYSKCGSVACAEE---------------------------------VFSGMIER 211
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
++V W +++ YEQNG +A+E+F M+ G +P+ TL++++S +SL +L G QIH
Sbjct: 212 NLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIH 271
Query: 436 ASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWR------------------ 476
A +++ + L + NAL+ MY+K +N ARRVF+ + R
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331
Query: 477 ------------QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+ VSW ++I Q+G EEA++LF + I P H T+ +L+AC
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSAC 391
Query: 525 TH-GGLVEQGQRYYNMMKNVHKIKPTPSH--FA--SMVDLLGRAGLLQEAYNFIENMPLE 579
+ L+ Q + +++K + + F S++D+ + G +++ E M E
Sbjct: 392 ANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-E 450
Query: 580 PDVVAWGSLL 589
D V+W +++
Sbjct: 451 RDCVSWNAII 460
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 302/829 (36%), Positives = 447/829 (53%), Gaps = 85/829 (10%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E P + P F A S LK N VGK V+ ++ G + +K S+++ + K
Sbjct: 184 EGVRPDHFVFPKVFKAC---SELK--NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKC 238
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTII 117
+ A++ F+E+ K + WN ++S Y +G A + + M D V+W II
Sbjct: 239 GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298
Query: 118 VTYNEIGRFKNAIRMFVEM------------------------------------VQDQV 141
Y + G+F+ A + F+EM V + V
Sbjct: 299 SGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGV 358
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAK 200
P T+ S +++CT L L G+++H + +K L + V NSL++ YAK +A+
Sbjct: 359 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 418
Query: 201 AVFDGMRLKNVSSWNVVVSLHI----HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
F ++ ++ SWN +++ + H ++L Q IE D++TWN ++ G++Q G
Sbjct: 419 RKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG 478
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
AL F M + P+ T++ L+AC + LKLGK+IH Y++R + + VG
Sbjct: 479 DGKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
+ALIS Y+ +E+A + F L RD
Sbjct: 538 SALISMYSGCDSLEVACSV---------------------------------FSELSTRD 564
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV W +++ Q+G + +A++L R M + N T+ + L S LA+L GK+IH
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ 624
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+R G + + N+LI MY + G+I +RR+F+L+ R + VSW MI HG G
Sbjct: 625 FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGMHGFGM 683
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
+A+ LF++ +G+KP+HIT+ +L+AC+H GL+E+G +Y+ MMK + + P +A M
Sbjct: 684 DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 743
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAG E FIE MP EP+ WGSLL ACR+H N DL + AA L +EP +S
Sbjct: 744 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSS 803
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y + N+YS+ G+WEDAA IR MK GV K G SW++++ K+H F V D HP +
Sbjct: 804 GNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLME 863
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I KM ++ +IKE+G+VPDT VL DV+ED KE L HSEK+A+AFGLIST T L
Sbjct: 864 QISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPL 923
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RI+KNLRVC DCHSA KFI K+ R+I++RD RFHHF G+CSC DYW
Sbjct: 924 RIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 191/698 (27%), Positives = 330/698 (47%), Gaps = 94/698 (13%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
M+ NP I E YA +LQ K N +G VHA+++ G+ + FL + L+ Y +
Sbjct: 80 MDLTNPDECI---EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ 136
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
T + A+++FD+M + + SW I+ Y
Sbjct: 137 TGCVEDARRMFDKMSERNVFSWTAIMEMYCG----------------------------- 167
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+G ++ I++F MV + V P F V +C+ L + GK V+ +++ G G
Sbjct: 168 --LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS 225
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV----------------------------- 211
V S+L+M+ K G +A+ F+ + K+V
Sbjct: 226 CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLS 285
Query: 212 ------SSWNVVVSLHIHSGRLDLARAQFDQM-----IERDVVTWNSMIAGYSQNGYDFE 260
+WN ++S + SG+ + A F +M + +VV+W ++IAG QNGYDFE
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNAL 319
AL +F M+ + +KP+ T+AS +SAC NL L+ G++IH Y I+ E D+ VGN+L
Sbjct: 346 ALSVFRKMVLE-GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DR 375
+ YAK VE+A++ + I +++++ +L GY G A + ++ +
Sbjct: 405 VDYYAKCRSVEVARR--KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D++ W ++ G+ Q G K A+E F+ M G PN T+S L+ + +L GK+IH
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIH 522
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
LR+ S V +ALI+MYS ++ A VF+ + R + V W S+I A AQ G
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWNSIISACAQSGRS 581
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
A+ L M ++ + +T V L AC+ + QG+ + + + S
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNS 640
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK-NLDLGKIAAE-KLLLIEP 613
++D+ GR G +Q++ + MP + D+V+W ++S +H +D + + + + ++P
Sbjct: 641 LIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKP 699
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQ 651
+ + NL S+C + I + KY + KT+
Sbjct: 700 N----HITFTNLLSACSH---SGLIEEGWKYFKMMKTE 730
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 6/272 (2%)
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+NG+ +A L SM P +++L L +L G Q+HA + +G
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ + L+ +Y + G + ARR+F+ + R SWT+++ G EE I+LF M+
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERN-VFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G++PDH + V AC+ G+ Y+ M ++ + S++D+ + G +
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDI 243
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEKLLLIEPDNSGAYSALCNLY 626
A F E + + DV W ++S L I+ KL ++PD ++A+ + Y
Sbjct: 244 ARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV-TWNAIISGY 301
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+ G++E+A+ M + K SW +
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/737 (38%), Positives = 429/737 (58%), Gaps = 57/737 (7%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N++++ Y + S A+ +FD+MP + L SWN +L+ Y + RL A ++F+LMP +D V
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV 140
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SW ++ Y + G A +F +M + + +LA+ G L +++
Sbjct: 141 SWNAMLSGYAQNGFVDEAREVFNKMPHRNSI----SWNGLLAAYVHNGRLKEARRLFESQ 196
Query: 172 VKTGLSGCVNVTNSLLNMYAK---VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
L N L+ Y K +GD A+ +FD M +++V SWN ++S + G L
Sbjct: 197 SNWELISW----NCLMGGYVKRNMLGD---ARQLFDRMPVRDVISWNTMISGYAQVGDLS 249
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
A+ F++ RDV TW +M++GY QNG EA F D+ + + +S
Sbjct: 250 QAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYF-----------DEMPVKNEISY- 297
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
NA+++ Y + + IA ++ E + N+ +
Sbjct: 298 ----------------------------NAMLAGYVQYKKMVIAGELFE--AMPCRNISS 327
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
+ T++ GY + G I AR++FD + RD V+W A++ GY QNG ++A+ +F M R+G
Sbjct: 328 WNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE 387
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
N T S LS + +A+L+ GKQ+H +++G + V NAL+ MY K G+ + A
Sbjct: 388 SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEAND 447
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF I ++ VSW +MI A+HG G +A+ LFE M + G+KPD IT VGVL+AC+H G
Sbjct: 448 VFEGIE-EKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSG 506
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L+++G Y+ M + +KPT H+ M+DLLGRAG L+EA N + NMP +P +WG+L
Sbjct: 507 LIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGAL 566
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L A R+H N +LG+ AAE + +EP NSG Y L NLY++ G+W D +R M+ GV+
Sbjct: 567 LGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQ 626
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G+SWV++QNK+H F V D HP++D IY + ++ +++ G+V T VLHDVEE+
Sbjct: 627 KVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEE 686
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE ML++HSEKLA+AFG+++ P +R+MKNLRVC DCH+AIK I K+V R I++RD+
Sbjct: 687 EKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDS 746
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHF +G+CSC DYW
Sbjct: 747 HRFHHFSEGICSCGDYW 763
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 240/516 (46%), Gaps = 92/516 (17%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
+F N ++ Y + + A K+FD MP K + SWN +LS YA+ G +D A EVFN MP+
Sbjct: 108 LFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPH 167
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMF--------------------VEMVQD-----QVL 142
R+S+SW ++ Y GR K A R+F M+ D +
Sbjct: 168 RNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRM 227
Query: 143 PTQFTVT--SVLASCTALGDLSAGKKVHS-------FVVKTGLSGCVN------------ 181
P + ++ ++++ +GDLS K++ + F +SG V
Sbjct: 228 PVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFD 287
Query: 182 --------VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
N++L Y + ++A +F+ M +N+SSWN +++ + +G + AR
Sbjct: 288 EMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKL 347
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD M +RD V+W ++I+GY+QNG+ EAL MF M +D ++ T + LS CA++
Sbjct: 348 FDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE-SSNRSTFSCALSTCADIAA 406
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L+LGKQ+H +++ F+ VGNAL+ Y K G + A + E GI +V+++ T++
Sbjct: 407 LELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFE--GIEEKDVVSWNTMI 464
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
GY ++G + A+ LF SM + G KP+
Sbjct: 465 -------------------------------AGYARHGFGRQALVLFESMKKAGVKPDEI 493
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNL 472
T+ +LS S +D G + S R S +I + +AG + A +
Sbjct: 494 TMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRN 553
Query: 473 IHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
+ + SW +++ A HG LGE+A ++ +M
Sbjct: 554 MPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKM 589
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+D D+V W + + +NG A+ +F SM R N +S L + + D
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF 100
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
++ L S N ++T Y + + A ++F+L+ +++ VSW +M+ AQ
Sbjct: 101 DKMPERDLFSW--------NVMLTGYVRNRRLGEAHKLFDLMP-KKDVVSWNAMLSGYAQ 151
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
+G +EA ++F +M + I++ G+L A H G +++ +R + N I
Sbjct: 152 NGFVDEAREVFNKMPH----RNSISWNGLLAAYVHNGRLKEARRLFESQSNWELIS---- 203
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ ++ + +L +A + MP+ DV++W +++S
Sbjct: 204 -WNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMISG 241
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 31/134 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH +++K G F+ N+L+ Y K S A VF+ + K + SWNT+++ YA
Sbjct: 409 LGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYA 468
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G GR A+ +F M + V P + T+
Sbjct: 469 RHG-----------------------------FGR--QALVLFESMKKAGVKPDEITMVG 497
Query: 151 VLASCTALGDLSAG 164
VL++C+ G + G
Sbjct: 498 VLSACSHSGLIDRG 511
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 300/813 (36%), Positives = 469/813 (57%), Gaps = 41/813 (5%)
Query: 4 PNPPSL-ISPLEFYAHLLQSNLKSRNP--------FVGKL--VHARIIKCGL-----HLS 47
P PP L ++ L +L +L +R+ F+ L +HAR++ L H
Sbjct: 2 PPPPLLAVASLPHQCSVLLRHLAARHSPVPSSPSSFLRTLRCLHARLLTAALLHDPSHPH 61
Query: 48 VFLKNSLMNFYAKTESISYAKKVF--DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM 105
+ L+ L++ Y + ++ +F D PV +++SAYA GRL + F+ +
Sbjct: 62 LTLR--LLHLYTLSPDLATPAVLFRADPGPVAA----TSLVSAYAVAGRLRDSAAFFDSV 115
Query: 106 P--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV--QDQVLPTQFTVTSVLASCTALGDL 161
P RD+V +I + A+ +F ++ D + P ++ TS+L++ + DL
Sbjct: 116 PVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDL 175
Query: 162 SAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKV---GDEMMAKAVFDGMRLKNVSSWNV 216
+ ++H V K G ++V+N+L+ +Y K G A+ V D M K+ +W
Sbjct: 176 AVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTT 235
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+V H+ G + AR+ F+++ V WN+MI+GY Q+G EA +F M+ + P
Sbjct: 236 IVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVS-KRIPP 294
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD----ATGPVGNALISCYAKVGGVEIA 332
D+FT S LSACAN GK +H IR + D A PV NAL++ Y+K G + +A
Sbjct: 295 DEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVA 354
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
KI + ++ +V+++ T+L GYI+ G + A RIF + + ++W M+ GY GL
Sbjct: 355 TKIFDS--MTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGL 412
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+DA++LF M E KP +YT + ++ L +L HGKQ+HA ++ G +S S NA
Sbjct: 413 AEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNA 472
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+TMY++ G + AR VF L+ ++VSW +MI AL QHG G EA++LF++M+ GI P
Sbjct: 473 LLTMYARCGAVKDARLVF-LVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYP 531
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D I+++ +LTAC H GLV+ G +Y+ M+ I P H+A ++DLLGRAG + EA +
Sbjct: 532 DRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDL 591
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I+ MP EP W ++LS CR++ +++LG AA++L + P++ G Y L N YS+ G+W
Sbjct: 592 IKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRW 651
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
DAA +RK M+ GVKK G SW+++ NKVHVF V D HP +Y + + +++++
Sbjct: 652 VDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKL 711
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+VPDT L D+ KE +L HSE+LA++FGL+ P T+ ++KNL++C DCH+A+
Sbjct: 712 GYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAM 771
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
F+ + V REIVVRD RFHHFK G CSC +YW
Sbjct: 772 MFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 301/772 (38%), Positives = 434/772 (56%), Gaps = 97/772 (12%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
+ + LLQ + R+ G+ VHA I+K G+ + +L+N
Sbjct: 97 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN--------------------- 135
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
T+LS YAK G L A VF+ + +R+ VSWT +I + + A + +
Sbjct: 136 ----------TLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCY 185
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M P + T S+L + T L G+KVH + K GL V SL+ MYAK
Sbjct: 186 ETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKC 245
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
GD A+ +F D++ E++VVTW +IAGY+
Sbjct: 246 GDISKAQVIF-------------------------------DKLPEKNVVTWTLLIAGYA 274
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
Q G AL + M + + + P+K T S L C L+ GK++H YII++ +
Sbjct: 275 QQGQVDVALELLEKM-QQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREI 333
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V NALI+ Y K GG++ AR++F L
Sbjct: 334 WVVNALITMYCKCGGLK---------------------------------EARKLFGDLP 360
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
RDVV WTAM+ GY Q G + +A++LFR M ++G KP+ T ++ L+ SS A L GK
Sbjct: 361 HRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKS 420
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IH + +G + + + +AL++MY+K G+++ AR VFN + R V+WT+MI AQHG
Sbjct: 421 IHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN-VVAWTAMITGCAQHG 479
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
EA++ FE+M + GIKPD +T+ VL+ACTH GLVE+G++++ M + IKP H+
Sbjct: 480 RCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 539
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
+ VDLLGRAG L+EA N I MP +P WG+LLSACR+H +++ G+ AAE +L ++P
Sbjct: 540 SCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDP 599
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
D+ GAY AL N+Y++ G++EDA +R+ M+ V K G SW+++ KVHVF VED HP
Sbjct: 600 DDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHP 659
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ IY ++ K+ ++IKE G+VPDT VLHDV+E+ K Q L HSE+LAI +GL+ TP
Sbjct: 660 EAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPG 719
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T +RI+KNLRVC DCH+A KFI K+V REI+ RDA RFHHF G+CSC D+W
Sbjct: 720 TPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 226/473 (47%), Gaps = 70/473 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR K A+ + M+ +L C L L G++VH+ ++K+G+ +
Sbjct: 75 GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+LL+MYAK G A+ VFDG+R +N +V
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRN-------------------------------IV 163
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W +MI + + EA + M K + KPDK T S L+A N E L++G+++H
Sbjct: 164 SWTAMIEAFVAGNQNLEAYKCYETM-KLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHME 222
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I + + VG +L+ YAK G + AQ I ++ + NV+ +T L+ GY + G +
Sbjct: 223 IAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDK--LPEKNVVTWTLLIAGYAQQGQV- 279
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
DV A+EL M + PN T +++L +
Sbjct: 280 ------------DV------------------ALELLEKMQQAEVAPNKITYTSILQGCT 309
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ +L+HGK++H ++SG + V NALITMY K G + AR++F + R + V+WT
Sbjct: 310 TPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWT 368
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+M+ AQ G +EAI LF RM + GIKPD +T+ LT+C+ +++G+ + + V
Sbjct: 369 AMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL--V 426
Query: 544 HKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
H + S +V + + G + +A + N E +VVAW ++++ C H
Sbjct: 427 HAGYSLDVYLQSALVSMYAKCGSMDDA-RLVFNQMSERNVVAWTAMITGCAQH 478
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+ G K+A+ + +M+ +G + + +L + L SL+ G+++HA+ L+SG +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ N L++MY+K G++ ARRVF+ I R VSWT+MI A EA + +E M
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRN-IVSWTAMIEAFVAGNQNLEAYKCYETMKLA 191
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G KPD +T+V +L A T+ L++ GQ+ + + ++ P S+V + + G + +
Sbjct: 192 GCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKA-GLELEPRVGTSLVGMYAKCGDISK 250
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
A + +P E +VV W L++ +D+ EK+
Sbjct: 251 AQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKM 289
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 297/761 (39%), Positives = 435/761 (57%), Gaps = 63/761 (8%)
Query: 35 VHARIIKCGLHLSVF---------LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
+ R +C LSVF N++++ Y A+KVF++MP + L SWN +
Sbjct: 69 AYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVM 128
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
LS Y K G L A +FN MP +D VSW ++ + + G + A ++F DQ+L
Sbjct: 129 LSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF-----DQML--- 180
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
VK +S N LL+ Y + G A+ +FD
Sbjct: 181 --------------------------VKNEIS-----WNGLLSAYVQNGRIEDARRLFDS 209
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+ SWN ++ ++ RLD AR+ FD+M RD ++WN MI GY+QNG EA +F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG-NALISCYA 324
+ P + A T ++ G A I E V NA+I+ Y
Sbjct: 270 EEL-------PIRDVFAWTAMVSGFVQN---GMLDEATRIFEEMPEKNEVSWNAMIAGYV 319
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ +E A+++ +Q + N ++ T++ GY + G+I A+ +FD + RD ++W AM+
Sbjct: 320 QSQQIEKARELFDQ--MPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY Q+G +++A+ LF M R+G N L+ LS + +A+L+ GKQ+H +++G
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ NAL+ MY K G+I A VF I ++ VSW +MI A+HG G+EA+ LFE
Sbjct: 438 TGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M ++ IKPD +T VGVL+AC+H GLV++G Y+N M + I H+ M+DLLGRAG
Sbjct: 497 M-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L EA N +++MP PD WG+LL A R+H + +LG+ AAEK+ +EPDNSG Y L N
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY++ G+W + +R M+ GVKK G+SWV+IQNK H+F V D HP+ + IY + +
Sbjct: 616 LYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEE 675
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ E+K+ GFV T VLHDVEE+ KE ML++HSEKLA+AFG++S P +R++KNLRV
Sbjct: 676 LDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRV 735
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+AIK I K+ R+I+VRD+ RFHHF +G CSC DYW
Sbjct: 736 CEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H R++K G N+L+ Y K SI A VF+++ K + SWNT+++ YA
Sbjct: 423 LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYA 482
Query: 91 KQGRLDLACEVFNLMP---NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+ G A +F M D V+ ++ + G + F M Q+ +
Sbjct: 483 RHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQN------YG 536
Query: 148 VTSVLASCTALGDL--SAGKKVHSFVVKTGLSGCVNVTN--SLLNMYAKVGD----EMMA 199
+T+ T + DL AG+ + + + + +LL GD E A
Sbjct: 537 ITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAA 596
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
+ VF+ M N + ++ +L+ SGR R +M ++ V + GYS
Sbjct: 597 EKVFE-MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGV----KKVPGYS 645
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 308/780 (39%), Positives = 440/780 (56%), Gaps = 75/780 (9%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L+ + HLL++ + R+ GK +H+ IK + S + N + Y+K +++A+K F
Sbjct: 8 LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
++ + S+N I++AYAK+ R +A ++F+ +P D VS+ T+I Y + G A+ +
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGL 127
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F M + + FT+++V+ +C D+ ++HS V +G V+V N+LL Y K
Sbjct: 128 FSGMREMGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
GD AK VF GM G + RD V+WNSMI Y
Sbjct: 186 NGDLDDAKRVFYGM------------------GGI------------RDEVSWNSMIVAY 215
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
Q+ +ALG+F M++ L D FTLAS L+A LE L G Q H +I+T F
Sbjct: 216 GQHQEGSKALGLFQEMVR-RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
VG+ LI Y+K GG G+S R++F+ +
Sbjct: 275 SHVGSGLIDLYSKCGG-----------GMS---------------------DCRKVFEEI 302
Query: 373 RDRDVVAWTAMLVGYEQNG-LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ D+V W M+ GY QN +DA+E FR M G +PN+ + ++S S+L+S G
Sbjct: 303 TEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362
Query: 432 KQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
KQIH+ AL+S S+ +SV NALI MYSK GN+ ARR+F+ + TVS SMI A
Sbjct: 363 KQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYA 421
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
QHG+ E++ LF+ MLE I P IT++ VL+AC H G VE+G Y+NMMK I+P
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEA 481
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H++ M+DLLGRAG L EA N I MP P + W SLL ACR H N++L AA ++L
Sbjct: 482 EHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EP N+ Y L N+Y+S G+WE+ A +RK M+ GVKK G SW++++ ++HVF ED
Sbjct: 542 LEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDS 601
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED-----VKEQMLRHHSEKLAIAF 725
HP IY + ++ ++K G+VPD L V++D KE L HHSEKLA+AF
Sbjct: 602 SHPMIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAF 659
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GLIST + + ++KNLR+C DCH+AIKFI + REI VRDA RFH FK+G CSC DYW
Sbjct: 660 GLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/765 (36%), Positives = 431/765 (56%), Gaps = 72/765 (9%)
Query: 36 HARIIKCGLHLSVFLK---------NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
+ R +C L VF + N++++ Y + A+ +FDEMP + L SWN ++
Sbjct: 69 YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMI 128
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ------DQ 140
Y + L A E+F MP RD SW TI+ Y + G +A R+F M + +
Sbjct: 129 KGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNA 188
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+L + + +C G V N LL + K + A+
Sbjct: 189 LLSAYVQNSKLEEACVLFGSRENWALVS--------------WNCLLGGFVKKKKIVEAR 234
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
FD M++++V SWN +++ + +G +D AR FD+ DV TW +M++GY QN E
Sbjct: 235 QFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEE 294
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A +F M P++ ++ NA++
Sbjct: 295 ARELFDRM-------PERNEVS---------------------------------WNAML 314
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ Y + VE+A+++ + + NV + T++ GY + G I A+ +FD + RD V+W
Sbjct: 315 AGYVQGERVEMAKELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 372
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
AM+ GY Q+G + +A+ LF M REG + N + S+ LS + + +L+ GKQ+H ++
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 432
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + V NAL+ MY K G+I A +F + ++ VSW +MI ++HG GEEA++
Sbjct: 433 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEEALR 491
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
FE M G+KPD T V VL+AC+H GLV++G++Y++ M + ++P H+A MVDLL
Sbjct: 492 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLL 551
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAGLL+EA+N ++NMP EPD WG+LL A RVH N +L + AA+K+ +EP+NSG Y
Sbjct: 552 GRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 611
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L NLY+S G+W D +R M+ GVKK G+SW++IQNK H F V D HP++D I+
Sbjct: 612 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 671
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ + +K+ G+V T+ VLHDVEE+ KE+M+R+HSE+LA+A+G++ +R++K
Sbjct: 672 FLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIK 731
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCH+AIK++ K+ R I++RD RFHHFK G CSC DYW
Sbjct: 732 NLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H R++K G F+ N+L+ Y K SI A +F EM K + SWNT+++ Y+
Sbjct: 422 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 481
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + E A+R F M ++ + P T+ +
Sbjct: 482 RHG--------------------------FGE-----EALRFFESMKREGLKPDDATMVA 510
Query: 151 VLASCTALGDLSAGKK-VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL++C+ G + G++ H+ G+ ++++ + G A + M +
Sbjct: 511 VLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFE 570
Query: 210 -NVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
+ + W ++ G +LA D++
Sbjct: 571 PDAAIWGTLLGASRVHGNTELAETAADKIF 600
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 296/796 (37%), Positives = 444/796 (55%), Gaps = 75/796 (9%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLK---------NS 53
T N P S L A +++ N+ N H R +C L +F N+
Sbjct: 33 TRNQPKTTSSLATDADIVKWNIAITN-------HMRNGQCDSALRLFNSMPRRSSISWNA 85
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+++ + A+++F++MP + L SWN ++S + L A +F+ MP RD VSW
Sbjct: 86 MISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSW 145
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
++ Y + G K A +F EM P + +++
Sbjct: 146 NAMLSGYAQNGYVKEAKEIFDEM------PCKNSIS------------------------ 175
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
N +L Y + G A+ +F+ + SWN ++ ++ RL AR
Sbjct: 176 ---------WNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 226
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD+M ERD V+WN+MI+GY+QNG EA +F + S D FT + +S
Sbjct: 227 FDRMPERDEVSWNTMISGYAQNGELLEAQRLF-----EESPVRDVFTWTAMVSGYVQNGM 281
Query: 294 LKLGKQIHAYIIRTEFDATGPVG----NALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L +++ FD NA+I+ Y + ++ A+++ E + NV ++
Sbjct: 282 LDEARRV--------FDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE--AMPCQNVSSW 331
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T++ GY + GDI AR FD + RD ++W A++ GY Q+G ++A+ LF M R+G +
Sbjct: 332 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 391
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
N T ++ LS + +A+L+ GKQ+H +++G S V NAL+ MY K GNI+ A V
Sbjct: 392 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F I +E VSW +MI A+HG G+EA+ LFE M + GI PD +T VGVL+AC+H GL
Sbjct: 452 FEGIE-EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGL 510
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
V++G Y+ M + I H+ M+DLLGRAG L +A N ++NMP EPD WG+LL
Sbjct: 511 VDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
A R+H N +LG+ AA+ + +EPDNSG Y L NLY++ G+W D +R M+ GVKK
Sbjct: 571 GASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKK 630
Query: 650 TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G+SWV++QNK+H F V D +HP+RD IY + ++ ++K+ G+V T VLHDVEE+
Sbjct: 631 VPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEE 690
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
K ML++HSEKLA+AFG+++ P +R++KNLRVC DCH+A+K I K+V R I++RD+
Sbjct: 691 KVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSH 750
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHF G CSC DYW
Sbjct: 751 RFHHFNGGQCSCGDYW 766
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 308/780 (39%), Positives = 440/780 (56%), Gaps = 75/780 (9%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L+ + HLL++ + R+ GK +H+ IK + S + N + Y+K +++A+K F
Sbjct: 8 LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
++ + S+N I++AYAK+ R +A ++F+ +P D VS+ T+I Y + G A+ +
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGL 127
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F M + + FT+++V+ +C D+ ++HS V +G V+V N+LL Y K
Sbjct: 128 FSGMREMGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGK 185
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
GD AK VF GM G + RD V+WNSMI Y
Sbjct: 186 NGDLDDAKRVFYGM------------------GGI------------RDEVSWNSMIVAY 215
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
Q+ +ALG+F M++ L D FTLAS L+A LE L G Q H +I+T F
Sbjct: 216 GQHQEGSKALGLFQEMVR-RGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
VG+ LI Y+K GG G+S R++F+ +
Sbjct: 275 SHVGSGLIDLYSKCGG-----------GMS---------------------DCRKVFEEI 302
Query: 373 RDRDVVAWTAMLVGYEQNG-LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ D+V W M+ GY QN +DA+E FR M G +PN+ + ++S S+L+S G
Sbjct: 303 TEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362
Query: 432 KQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
KQIH+ AL+S S+ +SV NALI MYSK GN+ ARR+F+ + TVS SMI A
Sbjct: 363 KQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYA 421
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
QHG+ E++ LF+ MLE I P IT++ VL+AC H G VE+G Y+NMMK I+P
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEA 481
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H++ M+DLLGRAG L EA N I MP P + W SLL ACR H N++L AA ++L
Sbjct: 482 EHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQ 541
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EP N+ Y L N+Y+S G+WE+ A +RK M+ GVKK G SW++++ ++HVF ED
Sbjct: 542 LEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDS 601
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED-----VKEQMLRHHSEKLAIAF 725
HP IY + ++ ++K G+VPD L V++D KE L HHSEKLA+AF
Sbjct: 602 SHPMIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAF 659
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GLIST + + ++KNLR+C DCH+AIKFI + REI VRDA RFH FK+G CSC DYW
Sbjct: 660 GLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 296/761 (38%), Positives = 434/761 (57%), Gaps = 63/761 (8%)
Query: 35 VHARIIKCGLHLSVF---------LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
+ R +C LSVF N++++ Y A+KVF++MP + L SWN +
Sbjct: 69 AYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVM 128
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
LS Y K G L A +FN MP +D VSW ++ + + G + A ++F DQ+L
Sbjct: 129 LSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF-----DQML--- 180
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
VK +S N LL+ Y + G A+ +FD
Sbjct: 181 --------------------------VKNEIS-----WNGLLSAYVQNGRIEDARRLFDS 209
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+ SWN ++ ++ RLD AR+ FD+M RD ++WN MI GY+QNG EA +F
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG-NALISCYA 324
+ P + A T ++ G A I E V NA+I+ Y
Sbjct: 270 EEL-------PIRDVFAWTAMVSGFVQN---GMLDEATRIFEEMPEKNEVSWNAMIAGYV 319
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ +E A+++ +Q + N ++ T++ GY + G+I A+ +FD + RD ++W AM+
Sbjct: 320 QSQQIEKARELFDQ--MPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY Q+G +++A+ LF M R+G N L+ LS + +A+L+ GKQ+H +++G
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ NAL+ MY K G+I A VF I ++ VSW +MI A+HG G+EA+ LFE
Sbjct: 438 TGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M ++ IKPD +T VGVL+AC+H G V++G Y+N M + I H+ M+DLLGRAG
Sbjct: 497 M-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L EA N +++MP PD WG+LL A R+H + +LG+ AAEK+ +EPDNSG Y L N
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY++ G+W + +R M+ GVKK G+SWV+IQNK H+F V D HP+ + IY + +
Sbjct: 616 LYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEE 675
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ E+K+ GFV T VLHDVEE+ KE ML++HSEKLA+AFG++S P +R++KNLRV
Sbjct: 676 LDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRV 735
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+AIK I K+ R+I+VRD+ RFHHF +G CSC DYW
Sbjct: 736 CEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H R++K G N+L+ Y K SI A VF+++ K + SWNT+++ YA
Sbjct: 423 LGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYA 482
Query: 91 KQGRLDLACEVFNLMP---NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+ G A +F M D V+ ++ + G + F M Q+ +
Sbjct: 483 RHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQN------YG 536
Query: 148 VTSVLASCTALGDL--SAGKKVHSFVVKTGLSGCVNVTN--SLLNMYAKVGD----EMMA 199
+T+ T + DL AG+ + + + + +LL GD E A
Sbjct: 537 ITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAA 596
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
+ VF+ M N + ++ +L+ SGR R +M ++ V + GYS
Sbjct: 597 EKVFE-MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGV----KKVPGYS 645
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 300/773 (38%), Positives = 438/773 (56%), Gaps = 98/773 (12%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
+ + LLQ + R+ G+ VHA I+K G+ + +L+N
Sbjct: 48 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN--------------------- 86
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
T+LS YAK G L A VF+ + +R+ VSWT +I + + A + +
Sbjct: 87 ----------TLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCY 136
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M P + T S+L + T L G+KVH +V+ GL V SL+ MYAK
Sbjct: 137 ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC 196
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
GD + AR FD++ E++VVTW +IAGY+
Sbjct: 197 GD-------------------------------ISKARVIFDRLPEKNVVTWTLLIAGYA 225
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
Q G AL + M + + + P+K T AS L C L+ GK++H YII++ +
Sbjct: 226 QQGQVDVALELLETM-QQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGREL 284
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V N+LI+ Y K GG+E AR++F L
Sbjct: 285 WVVNSLITMYCKCGGLE---------------------------------EARKLFSDLP 311
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
RDVV WTAM+ GY Q G + +A+ LFR M ++G KP+ T +++L+ SS A L GK+
Sbjct: 312 HRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKR 371
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL-AQH 492
IH + +G + + +AL++MY+K G+++ A VFN + R V+WT++I AQH
Sbjct: 372 IHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERN-VVAWTAIITGCCAQH 430
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G EA++ F++M + GIKPD +T+ VL+ACTH GLVE+G++++ M + IKP H
Sbjct: 431 GRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEH 490
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
++ VDLLGRAG L+EA N I +MP P WG+LLSACRVH +++ G+ AAE +L ++
Sbjct: 491 YSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLD 550
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
PD+ GAY AL ++Y++ G++EDA +R+ M+ V K G SW+++ KVHVF VED H
Sbjct: 551 PDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSH 610
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
P+ + IY ++ K+ ++IKEMG+VPDT VLHDV+E+ KE++L HSE+LAI +GL+ TP
Sbjct: 611 PESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPP 670
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLRVC DCH+A KFI K+V REI+ RDA RFHHF G+CSC D+W
Sbjct: 671 GMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 230/470 (48%), Gaps = 70/470 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR K A+ + M+ +L C L L G++VH+ ++K+G+ +
Sbjct: 26 GRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 85
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+LL+MYAK G L AR FD + +R++V
Sbjct: 86 NTLLSMYAKCGS-------------------------------LTDARRVFDSIRDRNIV 114
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W +MI + + EA + M K + KPDK T S L+A N E L+LG+++H
Sbjct: 115 SWTAMIEAFVAGNKNLEAFKCYETM-KLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHME 173
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I+ + VG +L+ YAK GDI
Sbjct: 174 IVEAGLELEPRVGTSLVGMYAKC---------------------------------GDIS 200
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR IFD L +++VV WT ++ GY Q G A+EL +M + PN T +++L +
Sbjct: 201 KARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCT 260
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ A+L+HGK++H ++SG L V N+LITMY K G + AR++F+ + R + V+WT
Sbjct: 261 TPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWT 319
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+M+ AQ G +EAI LF RM + GIKPD +T+ VLT+C+ +++G+R + + V
Sbjct: 320 AMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL--V 377
Query: 544 HKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
H + S +V + + G + +A + + N E +VVAW ++++ C
Sbjct: 378 HAGYNLDVYLQSALVSMYAKCGSMDDA-SLVFNQMSERNVVAWTAIITGC 426
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 290/819 (35%), Positives = 459/819 (56%), Gaps = 69/819 (8%)
Query: 31 VGKLVHARIIKCG-LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G+++ AR + G L + N++++ Y + I+ A+++FD MP + + SWN++L+ Y
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
++ A +F MP R+ VSWT +I Y I A +F +M ++ +LP Q
Sbjct: 169 CHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFA 228
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM-MAKAVFDGMRL 208
S L++ LG+L + + +KTG V + ++LN+Y++ + A F+ M
Sbjct: 229 SALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE 288
Query: 209 KNVSSWNVVVSLHIHSGRLDL-------------------------------ARAQFDQM 237
+N +W+ +++ H GR+D AR F+Q+
Sbjct: 289 RNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQI 348
Query: 238 IERDVVTWNS-------------------------------MIAGYSQNGYDFEALGMFA 266
E VV+WN+ MIAGY+QNG EALG+
Sbjct: 349 PEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQ 408
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
L S + P +L S AC+N+ L+ G Q+H+ ++ NALI+ Y K
Sbjct: 409 E-LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKC 467
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+E A+++ S + +++++ + L ++ + AR FD++ RD V+WT ++
Sbjct: 468 RNMEYARQVF--SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISA 525
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y + +A+ F++M E PN+ L+ +L V SL + G+QIH A++ G S
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L V+NALI+MY K G + +RR+F+L+ R + +W ++I AQHGLG EAI++++ M
Sbjct: 586 LIVANALISMYFKCGCAD-SRRIFDLMEER-DIFTWNTIITGYAQHGLGREAIKMYQHME 643
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G+ P+ +T+VG+L AC+H GLV++G +++ M + + P P H+A MVDLLGR G +
Sbjct: 644 SAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDV 703
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
Q A FI +MP+EPD V W +LL AC++HKN ++GK AAEKL IEP N+G Y L N+Y
Sbjct: 704 QGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIY 763
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
SS G W + A +RK MK GV K G SW QI++K+H F D H Q + I + +++
Sbjct: 764 SSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELY 823
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+K G+VPDT VLHD++E+ KE L +HSEKLA+A+ L++TP+ ++I+KNLR+C
Sbjct: 824 TLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICG 883
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+ IKF+ + R+I +RD RFHHF+ G CSC D+W
Sbjct: 884 DCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 245/508 (48%), Gaps = 43/508 (8%)
Query: 9 LISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-------SVFLKNSLMNFYAKT 61
L + ++F+ +++ N + + + L H I + + S+ + +L+ A+
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQC 335
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
I A+ +F+++P + SWN +++ Y + G ++ A E+F+ MP R+++SW +I Y
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ GR + A+ + E+ + +LP+ ++TS+ +C+ + L G +VHS VK G
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
N+L+ MY K + A+ VF M K++ SWN ++ + + LD AR FD M+ RD
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD 515
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V+W ++I+ Y+ EA+G F M + L P+ L L C +L K+G+QIH
Sbjct: 516 DVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIH 574
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
I+ D+ V NALIS Y K G +
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCGCAD------------------------------- 603
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+RRIFD + +RD+ W ++ GY Q+GL ++A+++++ M G PN T +L+
Sbjct: 604 ---SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETV 480
S +D G + S + + L A ++ + + G++ A + + +TV
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLEL 508
W++++ A H E + E++ +
Sbjct: 721 IWSALLGACKIHKNAEIGKRAAEKLFRI 748
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 274/590 (46%), Gaps = 108/590 (18%)
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A++VFD MP + + +WN+++SAY G D A ++++ + + + ++ Y +
Sbjct: 50 VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRL 109
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR A R+F M++ +
Sbjct: 110 GRVLEARRVFDGMLERNTV---------------------------------------AW 130
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N++++ Y + GD MA+ +FD M ++VSSWN +++ + HS ++ AR F++M ER++V
Sbjct: 131 NAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLV 190
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W MI+GY + +A +F M ++ L PD+ AS LSA L L + + +
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNLDVLESLRVL 249
Query: 304 IIRTEFDATGPVGNALISCYAKVGGV-----EIAQKIVEQSGISYLNVIAF--------- 349
++T F+ +G A+++ Y++ V + + ++E++ ++ +IA
Sbjct: 250 ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309
Query: 350 ----------------TTLLDG-------------------------------YIKIGDI 362
T L+ G Y++ G +
Sbjct: 310 AIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMV 369
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A+ +FD + R+ ++W M+ GY QNG +++A+ L + + R G P+ +L+++
Sbjct: 370 NEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC 429
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
S++ +L+ G Q+H+ A++ G + NALITMY K N+ AR+VF+ + ++ VSW
Sbjct: 430 SNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMV-TKDIVSW 488
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
S + AL Q+ L +EA F+ ML D +++ +++A H + + M
Sbjct: 489 NSFLAALVQNDLLDEARNTFDNML----SRDDVSWTTIISAYAHAEQSNEAMGAFKTMFC 544
Query: 543 VHKIKPTP--SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
H++ +P + + LG + + Q+ + + ++ +++ +L+S
Sbjct: 545 EHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 23/239 (9%)
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
++G +G AR +FD++ RD++AW +M+ Y NG+ A +L+ ++ N T +
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI----SGGNMRTGAI 101
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWR 476
+LS L G+ + A + G +V+ NA+I+ Y + G+I ARR+F+ + R
Sbjct: 102 LLSGYGRL-----GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR 156
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ SW SM+ +A LFE+M E + + G G +E +
Sbjct: 157 -DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGY-------GRIENHGKA 208
Query: 537 YNMMKNVHK--IKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+++ +H+ + P S+FA S V LG +L+ E DVV ++L+
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILN 267
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 290/819 (35%), Positives = 459/819 (56%), Gaps = 69/819 (8%)
Query: 31 VGKLVHARIIKCG-LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G+++ AR + G L + N++++ Y + I+ A+++FD MP + + SWN++L+ Y
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
++ A +F MP R+ VSWT +I Y I A +F +M ++ +LP Q
Sbjct: 169 CHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFA 228
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM-MAKAVFDGMRL 208
S L++ LG+L + + +KTG V + ++LN+Y++ + A F+ M
Sbjct: 229 SALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE 288
Query: 209 KNVSSWNVVVSLHIHSGRLDL-------------------------------ARAQFDQM 237
+N +W+ +++ H GR+D AR F+Q+
Sbjct: 289 RNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQI 348
Query: 238 IERDVVTWNS-------------------------------MIAGYSQNGYDFEALGMFA 266
E VV+WN+ MIAGY+QNG EALG+
Sbjct: 349 PEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQ 408
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
L S + P +L S AC+N+ L+ G Q+H+ ++ NALI+ Y K
Sbjct: 409 E-LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKC 467
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+E A+++ S + +++++ + L ++ + AR FD++ RD V+WT ++
Sbjct: 468 RNMEYARQVF--SRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISA 525
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y + +A+ F++M E PN+ L+ +L V SL + G+QIH A++ G S
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSE 585
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L V+NALI+MY K G + +RR+F+L+ R + +W ++I AQHGLG EAI++++ M
Sbjct: 586 LIVANALISMYFKCGCAD-SRRIFDLMEER-DIFTWNTIITGYAQHGLGREAIKMYQHME 643
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G+ P+ +T+VG+L AC+H GLV++G +++ M + + P P H+A MVDLLGR G +
Sbjct: 644 SAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDV 703
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
Q A FI +MP+EPD V W +LL AC++HKN ++GK AAEKL IEP N+G Y L N+Y
Sbjct: 704 QGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIY 763
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
SS G W + A +RK MK GV K G SW QI++K+H F D H Q + I + +++
Sbjct: 764 SSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELY 823
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+K G+VPDT VLHD++E+ KE L +HSEKLA+A+ L++TP+ ++I+KNLR+C
Sbjct: 824 TLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICG 883
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+ IKF+ + R+I +RD RFHHF+ G CSC D+W
Sbjct: 884 DCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 245/508 (48%), Gaps = 43/508 (8%)
Query: 9 LISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-------SVFLKNSLMNFYAKT 61
L + ++F+ +++ N + + + L H I + + S+ + +L+ A+
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQC 335
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
I A+ +F+++P + SWN +++ Y + G ++ A E+F+ MP R+++SW +I Y
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYA 395
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ GR + A+ + E+ + +LP+ ++TS+ +C+ + L G +VHS VK G
Sbjct: 396 QNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
N+L+ MY K + A+ VF M K++ SWN ++ + + LD AR FD M+ RD
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRD 515
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V+W ++I+ Y+ EA+G F M + L P+ L L C +L K+G+QIH
Sbjct: 516 DVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIH 574
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
I+ D+ V NALIS Y K G +
Sbjct: 575 TVAIKLGMDSELIVANALISMYFKCGCAD------------------------------- 603
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+RRIFD + +RD+ W ++ GY Q+GL ++A+++++ M G PN T +L+
Sbjct: 604 ---SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETV 480
S +D G + S + + L A ++ + + G++ A + + +TV
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLEL 508
W++++ A H E + E++ +
Sbjct: 721 IWSALLGACKIHKNAEIGKRAAEKLFRI 748
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 274/590 (46%), Gaps = 108/590 (18%)
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A++VFD MP + + +WN+++SAY G D A ++++ + + + ++ Y +
Sbjct: 50 VGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRL 109
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR A R+F M++ +
Sbjct: 110 GRVLEARRVFDGMLERNTV---------------------------------------AW 130
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N++++ Y + GD MA+ +FD M ++VSSWN +++ + HS ++ AR F++M ER++V
Sbjct: 131 NAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLV 190
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W MI+GY + +A +F M ++ L PD+ AS LSA L L + + +
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHRE-GLLPDQSNFASALSAVKGLGNLDVLESLRVL 249
Query: 304 IIRTEFDATGPVGNALISCYAKVGGV-----EIAQKIVEQSGISYLNVIAF--------- 349
++T F+ +G A+++ Y++ V + + ++E++ ++ +IA
Sbjct: 250 ALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309
Query: 350 ----------------TTLLDG-------------------------------YIKIGDI 362
T L+ G Y++ G +
Sbjct: 310 AIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMV 369
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A+ +FD + R+ ++W M+ GY QNG +++A+ L + + R G P+ +L+++
Sbjct: 370 NEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFAC 429
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
S++ +L+ G Q+H+ A++ G + NALITMY K N+ AR+VF+ + ++ VSW
Sbjct: 430 SNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMV-TKDIVSW 488
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
S + AL Q+ L +EA F+ ML D +++ +++A H + + M
Sbjct: 489 NSFLAALVQNDLLDEARNTFDNML----SRDDVSWTTIISAYAHAEQSNEAMGAFKTMFC 544
Query: 543 VHKIKPTP--SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
H++ +P + + LG + + Q+ + + ++ +++ +L+S
Sbjct: 545 EHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 23/239 (9%)
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
++G +G AR +FD++ RD++AW +M+ Y NG+ A +L+ ++ N T +
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI----SGGNMRTGAI 101
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWR 476
+LS L G+ + A + G +V+ NA+I+ Y + G+I ARR+F+ + R
Sbjct: 102 LLSGYGRL-----GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR 156
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ SW SM+ +A LFE+M E + + G G +E +
Sbjct: 157 -DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGY-------GRIENHGKA 208
Query: 537 YNMMKNVHK--IKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+++ +H+ + P S+FA S V LG +L+ E DVV ++L+
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILN 267
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/689 (40%), Positives = 426/689 (61%), Gaps = 54/689 (7%)
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
P+R + SW + + F+ AI ++EM P F +VL + + L DL G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 166 KVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
++H+ VK G S V V N+L+NMY K G G+ K ++ N +++++
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCG----------GIGDKTFTN-NALMAMYAKL 161
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
GR+D ++A F+ ++RD+V+WN+MI+ +SQ+ EAL F M+ + ++ D T+AS
Sbjct: 162 GRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG-VELDGVTIASV 220
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L AC++LE+L +GK+IHAY++R N LI
Sbjct: 221 LPACSHLERLDVGKEIHAYVLRN---------NDLIE----------------------- 248
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
N + L+D Y + RR+FD + R + W AM+ GY +NGL++ A+ LF M+
Sbjct: 249 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMI 308
Query: 405 R-EGPKPNNYTL-SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
+ G PN T+ S M + SLA++ GK+IHA A+R+ AS ++V +AL+ MY+K G
Sbjct: 309 KVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGC 368
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-ELG----IKPDHITY 517
+N +RRVFN + + ++W +I+A HG GEEA++LF+ M+ E G KP+ +T+
Sbjct: 369 LNLSRRVFNEMP-NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTF 427
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
+ V AC+H GL+ +G + MK+ H ++PT H+A +VDLLGRAG L+EAY + MP
Sbjct: 428 ITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMP 487
Query: 578 LEPDVV-AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
E D V AW SLL ACR+H+N++LG++AA+ LL +EP+ + Y L N+YSS G W A
Sbjct: 488 AEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAM 547
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
+RK+M+ +GVKK G SW++ +++VH F D HPQ + ++ + + +++++ G+VP
Sbjct: 548 EVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVP 607
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
DT+ VLH+V+ED KE +L HSEKLAIAFG+++TP TT+R+ KNLRVCNDCH+A KFI
Sbjct: 608 DTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFIS 667
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+++REI+VRD RFHHFK+G CSC DYW
Sbjct: 668 KIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 221/483 (45%), Gaps = 88/483 (18%)
Query: 31 VGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
G+ +HA +K G SV + N+L+N Y K I K F N +++ Y
Sbjct: 110 TGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGI--GDKTFTN---------NALMAMY 158
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
AK GR+D + +F +RD VSW T+I ++++ RF A+ F MV + V T+
Sbjct: 159 AKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIA 218
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
SVL +C+ L L GK++H++V++ L V ++L++MY + VFD
Sbjct: 219 SVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD---- 274
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
HI R++L WN+MI+GY++NG D +AL +F M
Sbjct: 275 ------------HILGRRIEL---------------WNAMISGYARNGLDEKALILFIEM 307
Query: 269 LKDSSLKPDKFTLASTLSACAN-LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+K + L P+ T+AS + AC + L + GK+IHAY IR + VG+AL+ YAK G
Sbjct: 308 IKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCG 367
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ + +RR+F+ + +++V+ W +++
Sbjct: 368 CLNL---------------------------------SRRVFNEMPNKNVITWNVLIMAC 394
Query: 388 EQNGLNKDAVELFRSMVREG-----PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+G ++A+ELF++MV E KPN T + + S + G +
Sbjct: 395 GMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDH 454
Query: 443 EASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHG---LGEE 497
S A ++ + +AG + A + N + + V +W+S++ A H LGE
Sbjct: 455 GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEV 514
Query: 498 AIQ 500
A +
Sbjct: 515 AAK 517
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 293/763 (38%), Positives = 437/763 (57%), Gaps = 65/763 (8%)
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
++ES++ K + P + WN +S + + G D A VFN MP R SVS+ +I
Sbjct: 32 RSESVTNNNKPRVKDP--DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISG 89
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT-----ALGDLSAGKKVHSFVVKT 174
Y +F A +F +M + + +T + +C L DL K V S+
Sbjct: 90 YLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW---- 145
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL------- 227
NSLL+ YA+ G A+ VFD M KN SWN +++ ++H+GR+
Sbjct: 146 ---------NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF 196
Query: 228 ------DL------------------ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
DL AR FD+M RD ++WN+MI+GY+Q G +A
Sbjct: 197 ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARR 256
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG-NALISC 322
+F D S D FT + +S ++ G A E V NA+I+
Sbjct: 257 LF-----DESPTRDVFTWTAMVSG-----YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAG 306
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y + ++IA+++ E + N+ ++ T++ GY +IGDI AR+ FD + RD V+W A
Sbjct: 307 YVQTKKMDIARELFES--MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAA 364
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY Q+G ++A+ +F + ++G N T LS + +A+L+ GKQIH A++ G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V NAL+ MY K G+I+ A F I ++ VSW +M+ A+HG G +A+ +F
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M G+KPD IT VGVL+AC+H GL+++G Y+ M + + PT H+ M+DLLGR
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA + I NMP +P +WG+LL A R+H N +LG+ AAE + +EP NSG Y L
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLL 603
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
NLY++ G+W DA +R M+ +GV+K G+SWV++QNK+H F V D HP+++ IY +
Sbjct: 604 SNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYL 663
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ +++E G+V T VLHDVEE+ KE ML++HSEKLA+AFG+++ P +R+MKNL
Sbjct: 664 EELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNL 723
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHSAIK I K+V R I++RD+ RFHHF +G CSC DYW
Sbjct: 724 RVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 230/516 (44%), Gaps = 92/516 (17%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
+F N ++ Y + + A+++FD MP K + SWN++LS YA+ G +D A EVF+ MP
Sbjct: 111 LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFV-----EMVQDQVLPTQFTVTSVLASCTALGD-- 160
++S+SW ++ Y GR + A +F +++ L F L L D
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230
Query: 161 -----LSAGKKVHSFVVKTGLSGCVN--------------------VTNSLLNMYAKVGD 195
+S + + GLS V N +L+ D
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFD 290
Query: 196 EM----------------------MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
EM +A+ +F+ M +N+SSWN +++ + G + AR
Sbjct: 291 EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKF 350
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD M +RD V+W ++IAGY+Q+G+ EAL MF + +D ++ T LS CA++
Sbjct: 351 FDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE-SLNRATFGCALSTCADIAA 409
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L+LGKQIH ++ + VGNAL++ Y K G ++ A E GI +V+++ T+L
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFE--GIEEKDVVSWNTML 467
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
GY + +G + A+ +F SM G KP+
Sbjct: 468 AGYAR-------------------------------HGFGRQALTVFESMKTAGVKPDEI 496
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNL 472
T+ +LS S LD G + S + G + +I + +AG + A+ +
Sbjct: 497 TMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRN 556
Query: 473 IHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
+ ++ SW +++ A HG LGE+A ++ +M
Sbjct: 557 MPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM 592
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 129/266 (48%), Gaps = 57/266 (21%)
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L + GL++ G Y+ M + + PT H+ M+DLLGR L+E
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE------------ 818
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
G+LL A R+H N +LG+ AA+ + P NSG
Sbjct: 819 -----GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------S 852
Query: 641 SMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTAS 700
M+ VGV+K G+SW ++QNK+H F V +L +R+ I GF+ +
Sbjct: 853 KMRDVGVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI--------------GFLEEL-D 897
Query: 701 VLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN-LRVCNDCHSAIKFICKLV 759
+ E+ KE+ L++ SE LA A G+++ P R+MK + VC DC SAIK + K+V
Sbjct: 898 LKMREREEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIV 957
Query: 760 DREIVVRDATRFHHFKKGLCSCRDYW 785
R I +RD+ H F + +CSC +YW
Sbjct: 958 GRLITLRDS---HRFNESICSCGEYW 980
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + +K G F+ N+L+ Y K SI A F+ + K + SWNT+L+ YA
Sbjct: 412 LGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYA 471
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQ 145
+ G A VF M D ++ ++ + G F M +D V+PT
Sbjct: 472 RHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTS 531
Query: 146 FTVTSVL 152
T ++
Sbjct: 532 KHYTCMI 538
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 293/763 (38%), Positives = 437/763 (57%), Gaps = 65/763 (8%)
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
++ES++ K + P + WN +S + + G D A VFN MP R SVS+ +I
Sbjct: 32 RSESVTNNNKPRVKDP--DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISG 89
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT-----ALGDLSAGKKVHSFVVKT 174
Y +F A +F +M + + +T + +C L DL K V S+
Sbjct: 90 YLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSW---- 145
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL------- 227
NSLL+ YA+ G A+ VFD M KN SWN +++ ++H+GR+
Sbjct: 146 ---------NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF 196
Query: 228 ------DL------------------ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
DL AR FD+M RD ++WN+MI+GY+Q G +A
Sbjct: 197 ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARR 256
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG-NALISC 322
+F D S D FT + +S ++ G A E V NA+I+
Sbjct: 257 LF-----DESPTRDVFTWTAMVSG-----YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAG 306
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y + ++IA+++ E + N+ ++ T++ GY +IGDI AR+ FD + RD V+W A
Sbjct: 307 YVQTKKMDIARELFES--MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAA 364
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY Q+G ++A+ +F + ++G N T LS + +A+L+ GKQIH A++ G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V NAL+ MY K G+I+ A F I ++ VSW +M+ A+HG G +A+ +F
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M G+KPD IT VGVL+AC+H GL+++G Y+ M + + PT H+ M+DLLGR
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA + I NMP +P +WG+LL A R+H N +LG+ AAE + +EP NSG Y L
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLL 603
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
NLY++ G+W DA +R M+ +GV+K G+SWV++QNK+H F V D HP+++ IY +
Sbjct: 604 SNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYL 663
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ +++E G+V T VLHDVEE+ KE ML++HSEKLA+AFG+++ P +R+MKNL
Sbjct: 664 EELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNL 723
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHSAIK I K+V R I++RD+ RFHHF +G CSC DYW
Sbjct: 724 RVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 230/516 (44%), Gaps = 92/516 (17%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
+F N ++ Y + + A+++FD MP K + SWN++LS YA+ G +D A EVF+ MP
Sbjct: 111 LFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPE 170
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFV-----EMVQDQVLPTQFTVTSVLASCTALGD-- 160
++S+SW ++ Y GR + A +F +++ L F L L D
Sbjct: 171 KNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230
Query: 161 -----LSAGKKVHSFVVKTGLSGCVN--------------------VTNSLLNMYAKVGD 195
+S + + GLS V N +L+ D
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFD 290
Query: 196 EM----------------------MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
EM +A+ +F+ M +N+SSWN +++ + G + AR
Sbjct: 291 EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKF 350
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD M +RD V+W ++IAGY+Q+G+ EAL MF + +D ++ T LS CA++
Sbjct: 351 FDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE-SLNRATFGCALSTCADIAA 409
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L+LGKQIH ++ + VGNAL++ Y K G ++ A E GI +V+++ T+L
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFE--GIEEKDVVSWNTML 467
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
GY + +G + A+ +F SM G KP+
Sbjct: 468 AGYAR-------------------------------HGFGRQALTVFESMKTAGVKPDEI 496
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNL 472
T+ +LS S LD G + S + G + +I + +AG + A+ +
Sbjct: 497 TMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRN 556
Query: 473 IHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
+ ++ SW +++ A HG LGE+A ++ +M
Sbjct: 557 MPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM 592
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + +K G F+ N+L+ Y K SI A F+ + K + SWNT+L+ YA
Sbjct: 412 LGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYA 471
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQ 145
+ G A VF M D ++ ++ + G F M +D V+PT
Sbjct: 472 RHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTS 531
Query: 146 FTVTSVL 152
T ++
Sbjct: 532 KHYTCMI 538
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 290/818 (35%), Positives = 458/818 (55%), Gaps = 67/818 (8%)
Query: 31 VGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G+++ AR + G+ + N++++ Y + I+ A+++FD MP + + SWN++++ Y
Sbjct: 108 LGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGY 167
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
++ A +F MP R+ V+WT +I Y I + +F M + P Q
Sbjct: 168 CHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFA 227
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM-MAKAVFDGMRL 208
SVL++ T L DL + + V+KTG V + S+LN+Y + + +A FDGM
Sbjct: 228 SVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVE 287
Query: 209 KNVSSWNVVVSLHIHSGRLDL-------------------------------ARAQFDQM 237
+N +W+ +++ H GR+D AR F+Q+
Sbjct: 288 RNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQI 347
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANM----------------------------- 268
+ VV+WN+MI GY QNG EA +F M
Sbjct: 348 PDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQ 407
Query: 269 -LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
L + + P +L S+ AC+++ L+ G+Q+H+ ++ V NALIS Y K
Sbjct: 408 ALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCR 467
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E +++ + + + +++ + + ++ + AR IFD++ RDVV+WT ++ Y
Sbjct: 468 NMEYVRQVFNRMRVK--DTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAY 525
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q +AVE F++M+ E KPN+ L+ +LSV L S G+QIH A++ G S L
Sbjct: 526 AQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSEL 585
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V+NAL++MY K G + + +VF+ + R + +W + I AQHGLG EAI+++E M
Sbjct: 586 IVANALMSMYFKCGCAD-SHKVFDSMEER-DIFTWNTFITGCAQHGLGREAIKMYEHMES 643
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+G+ P+ +T+VG+L AC+H GLV++G +++ M + + P H+A MVDLLGR G +Q
Sbjct: 644 VGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQ 703
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
A FI +MP+EPD V W +LL AC++HKN ++G+ AAEKL EP N+G Y L N+YS
Sbjct: 704 GAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYS 763
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G W + A +RK MK GV K G SW+QI+NKVH F D H + + I + ++
Sbjct: 764 SLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYT 823
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++ G+VPDT VLHD++E+ KE L +HSEKLA+A+GL+ TP+ ++IMKNLR+C D
Sbjct: 824 LLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGD 883
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ IKF+ + R+I +RD RFHHF+ G CSC D+W
Sbjct: 884 CHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 249/512 (48%), Gaps = 43/512 (8%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-------SVFLKNSLM 55
T + +L ++F+ +++ N + + + L H I + + S+ + +L+
Sbjct: 269 TRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALL 328
Query: 56 NFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTT 115
A+ I+ A+ +F+++P + SWN +++ Y + G +D A E+F+ MP R+++SW
Sbjct: 329 TGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAG 388
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+I Y + GR + A+ + + ++ +LP+ ++TS +C+ +G L G++VHS VK G
Sbjct: 389 MIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAG 448
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
V N+L++MY K + + VF+ MR+K+ SWN ++ + + L+ AR FD
Sbjct: 449 CQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFD 508
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
M+ RDVV+W ++I+ Y+Q EA+ F ML + KP+ L LS C L K
Sbjct: 509 NMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHE-KPNSPILTILLSVCGGLGSAK 567
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
LG+QIH I+ D+ V NAL+S Y K G +
Sbjct: 568 LGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD------------------------- 602
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
+ ++FDS+ +RD+ W + G Q+GL ++A++++ M G PN T
Sbjct: 603 ---------SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTF 653
Query: 416 SAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+L+ S +D G Q S R G L ++ + + G++ A + +
Sbjct: 654 VGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMP 713
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+TV W++++ A H E + E++
Sbjct: 714 IEPDTVIWSALLGACKIHKNAEIGRRAAEKLF 745
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 153/602 (25%), Positives = 279/602 (46%), Gaps = 122/602 (20%)
Query: 59 AKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIV 118
A+ + A++VFD MP + + +WN+++SAY G L+ A +F+ + + + T ++
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLS 103
Query: 119 TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG 178
Y +GR +A R+F M P + TV
Sbjct: 104 GYARLGRVLDARRVFDGM------PERNTVA----------------------------- 128
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
N++++ Y + GD MA+ +FD M ++V+SWN +V+ + HS ++ A F QM
Sbjct: 129 ----WNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMP 184
Query: 239 ERDVVTWNSMIAGY---SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+R++VTW MI+GY Q+G ++ M+ PD+ AS LSA L+ L
Sbjct: 185 QRNLVTWTVMISGYVRIEQHGKGWDIF----RMMHHEGASPDQSNFASVLSAVTGLQDLG 240
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAK-VGGVEIAQK----IVEQSGISYLNVIAF- 349
+ + + +++T F++ +G ++++ Y + ++IA K +VE++ ++ +IA
Sbjct: 241 VLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAAL 300
Query: 350 ------------------------TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
T LL G + G I AR +F+ + D VV+W AM+
Sbjct: 301 SHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMIT 360
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS------------------------- 420
GY QNG+ +A ELF M P N + + M++
Sbjct: 361 GYMQNGMVDEAKELFDRM----PFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 421 ----------VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
S + +L+ G+Q+H+ A+++G + V NALI+MY K N+ R+VF
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVF 476
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
N + ++TVSW S I AL Q+ + E+A +F+ ML D +++ +++A
Sbjct: 477 NRMR-VKDTVSWNSFIAALVQNNMLEDARHIFDNML----SRDVVSWTTIISAYAQAERG 531
Query: 531 EQGQRYYNMMKNVHKIKPTP--SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
++ ++ M + H+ +P + S+ LG A L Q+ + ++ +++ +L
Sbjct: 532 DEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANAL 591
Query: 589 LS 590
+S
Sbjct: 592 MS 593
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 209/461 (45%), Gaps = 94/461 (20%)
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
A++G A+ VFD M +++ +WN ++S + +SG L+ AR FD + +V T +++
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLS 103
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GY++ G +A +F M P++ T+A
Sbjct: 104 GYARLGRVLDARRVFDGM-------PERNTVA---------------------------- 128
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
NA++SCY + G + +A+++ + + +V ++ +++ GY + A +F
Sbjct: 129 -----WNAMVSCYVQNGDITMARRLFD--AMPSRDVTSWNSMVTGYCHSRQMVDAWNLFK 181
Query: 371 SLRDRDVVAWTAMLVGY---EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+ R++V WT M+ GY EQ+G D +FR M EG P+ +++LS + L
Sbjct: 182 QMPQRNLVTWTVMISGYVRIEQHGKGWD---IFRMMHHEGASPDQSNFASVLSAVTGLQD 238
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSK-AGNINAARRVFNLIHWRQETVSWTSMI 486
L + + L++G S + + +++ +Y++ A ++ A + F+ + R E +W++MI
Sbjct: 239 LGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNE-YTWSTMI 297
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
AL+ G + AI ++ R +
Sbjct: 298 AALSHGGRIDAAIAVYGR---------------------------------------DPV 318
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
K PS A ++ L R G + EA E +P +P VV+W ++++ + +D K +
Sbjct: 319 KSIPSQTA-LLTGLARCGRITEARILFEQIP-DPIVVSWNAMITGYMQNGMVDEAKELFD 376
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
++ N+ +++ + Y+ G+ E+A ++ +++ G+
Sbjct: 377 RMPF---RNTISWAGMIAGYAQNGRSEEALDLLQALHRNGM 414
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/644 (42%), Positives = 403/644 (62%), Gaps = 36/644 (5%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P+ ++++A+C L G++VH+ + V ++N LL+MYAK G + A+ +
Sbjct: 85 PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M +++ SWN ++ + GRL+ AR FD+M +RD +WN+ I+GY + EAL
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREAL 204
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + +KFTL+S L+A A + L+LGK+IH Y+IRTE +
Sbjct: 205 ELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELN------------ 252
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
L+ + ++ LLD Y K G + AR IFD ++DRDVV+WT
Sbjct: 253 ---------------------LDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTT 291
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ ++G ++ LFR +++ G +PN YT + +L+ + A+ GK++H + +G
Sbjct: 292 MIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAG 351
Query: 443 -EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ S ++S AL+ MYSK GN ARRVFN +H + + VSWTS+IV AQ+G +EA+
Sbjct: 352 YDPGSFAIS-ALVHMYSKCGNTRVARRVFNEMH-QPDLVSWTSLIVGYAQNGQPDEALHF 409
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FE +L+ G KPD +TYVGVL+ACTH GLV++G Y++ +K H + T H+A ++DLL
Sbjct: 410 FELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 469
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R+G +EA N I+NMP++PD W SLL CR+H NL+L K AA+ L IEP+N Y
Sbjct: 470 RSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYIT 529
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y++ G W + AN+RK M +G+ K G SW++I+ +VHVF V D HP+ I+
Sbjct: 530 LANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEF 589
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ +IKE G+VPDT VLHDVEE+ KEQ L +HSEKLA+ FG+ISTP T +++ KN
Sbjct: 590 LGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKN 649
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR C DCH+AIK+I K+V R+I VRD+ RFH F+ G CSC+DYW
Sbjct: 650 LRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 265/563 (47%), Gaps = 104/563 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ L+ + ++ R +G+ VHA VF+ N L++ YAK S+ A+ +FDEM
Sbjct: 90 YSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMG 149
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ LCSWNT++ YAK GRL+ A ++F+ MP RD+ SW I Y + + A+ +F
Sbjct: 150 HRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRV 209
Query: 136 MVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M + ++ +FT++S LA+ A+ L GK++H ++++T L+ V ++LL++Y K G
Sbjct: 210 MQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCG 269
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ +FD M+ ++V V+W +MI +
Sbjct: 270 SLDEARGIFDQMKDRDV-------------------------------VSWTTMIHRCFE 298
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G E +F ++++ S ++P+++T A L+ACA+ LGK++H Y++ +D
Sbjct: 299 DGRREEGFLLFRDLMQ-SGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSF 357
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+AL+ Y+K G +A++ +F+ +
Sbjct: 358 AISALVHMYSKCGNTRVARR---------------------------------VFNEMHQ 384
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D+V+WT+++VGY QNG +A+ F +++ G KP+ T +LS + +D G +
Sbjct: 385 PDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEY 444
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
S + K G ++ A + +I LA+ G
Sbjct: 445 FHS------------------IKEKHGLMHTADH-------------YACVIDLLARSGR 473
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP-TPSHF 553
+EA + + M +KPD + +L C G +E +R K +++I+P P+ +
Sbjct: 474 FKEAENIIDNM---PVKPDKFLWASLLGGCRIHGNLELAKR---AAKALYEIEPENPATY 527
Query: 554 ASMVDLLGRAGLLQEAYNFIENM 576
++ ++ AGL E N ++M
Sbjct: 528 ITLANIYANAGLWSEVANVRKDM 550
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 44/234 (18%)
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
K+AVEL R +P+ S +++ +L+ G+++HA S + +SN L
Sbjct: 72 KEAVELLH---RTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ MY+K G++ A+ +F+ + R + SW +MIV A+ G E+A +LF+ M + D
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHR-DLCSWNTMIVGYAKLGRLEQARKLFDEMPQR----D 183
Query: 514 HITYVGVLTA-CTHGGLVEQGQRYYNMM----------------------------KNVH 544
+ ++ ++ TH E + + M K +H
Sbjct: 184 NFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIH 243
Query: 545 ------KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
++ +++++DL G+ G L EA + M + DVV+W +++ C
Sbjct: 244 GYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK-DRDVVSWTTMIHRC 296
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 297/827 (35%), Positives = 455/827 (55%), Gaps = 142/827 (17%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK VH + IKCG V + SL++ Y KTES+ ++VFDEM VK +
Sbjct: 110 VGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV----------- 158
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VSWT+++ Y + G + A+++F +M + + P FT +
Sbjct: 159 --------------------VSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAA 198
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN-------------------------- 184
VL A G + G +VH+ V+K+GL + V N
Sbjct: 199 VLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRN 258
Query: 185 -----SLLNMYAKVGDEMMAKAVFDGMRLKNV----SSWNVVVSLHIHSGRLDLARAQFD 235
S++ + G ++ A +F MRL+ V + + V+ L + + A+
Sbjct: 259 AVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHC 318
Query: 236 QMIE------------------------------------RDVVTWNSMIAGYSQNGYDF 259
Q+I+ ++VV+W ++I+GY QNG
Sbjct: 319 QVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTD 378
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
A+ +F M ++ ++P+ FT ++ L+A A + QIHA +++T ++ + VG
Sbjct: 379 RAMNLFCQMRREG-VRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVG--- 430
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
T L D Y KIGD A +IF+ + ++D+VA
Sbjct: 431 ------------------------------TALSDSYSKIGDANEAAKIFELIDEKDIVA 460
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASA 438
W+AML GY Q G + AV++F + +EG +PN +T S++L + ++ AS++ GKQ H+ +
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 520
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
++SG +++L VS+AL+TMY+K GNI +A VF ++ VSW SMI AQHG G+++
Sbjct: 521 IKSGFSNALCVSSALVTMYAKRGNIESANEVFKR-QVDRDLVSWNSMISGYAQHGCGKKS 579
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+++FE M ++ D IT++GV++ACTH GLV +GQRY+++M + I PT H++ MVD
Sbjct: 580 LKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVD 639
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
L RAG+L++A + I MP W +LL+ACRVH N+ LG++AAEKL+ ++P +S A
Sbjct: 640 LYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAA 699
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N+Y++ G W++ A +RK M VKK G+SW++++NK F D HPQ D I
Sbjct: 700 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 759
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y K+ ++ +K+ G+ PDT VLHDVEE+ KE +L HSE+LAIAFGLI+TP T ++I
Sbjct: 760 YLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQI 819
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLRVC DCH+ IK I K+ R+IVVRD+ RFHHFK G CSC DYW
Sbjct: 820 VKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 237/492 (48%), Gaps = 71/492 (14%)
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
++F+ P + ++ ++ + K A+ +F+ + + +++ VL C L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
D GK+VH +K G V+V SL++MY K + VFD MR+KNV SW
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSW----- 161
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
S++AGY QNG + +AL +F+ M + +KP+ F
Sbjct: 162 --------------------------TSLLAGYRQNGLNEQALKLFSQM-QLEGIKPNPF 194
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T A+ L A ++ G Q+H +I++ D+T VGN++++ Y+K
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK-------------- 240
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
+L+ + A+ +FDS+ +R+ V+W +M+ G+ NGL+ +A EL
Sbjct: 241 -----------SLM--------VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M EG K + ++ + +++ + KQ+H +++G L++ AL+ YSK
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
I+ A ++F ++H Q VSWT++I Q+G + A+ LF +M G++P+H TY
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
+LTA V Q + ++K + + +PS ++ D + G EA E + E
Sbjct: 402 ILTA---NAAVSPSQIHALVVKTNY--ENSPSVGTALSDSYSKIGDANEAAKIFELID-E 455
Query: 580 PDVVAWGSLLSA 591
D+VAW ++LS
Sbjct: 456 KDIVAWSAMLSG 467
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 122/236 (51%), Gaps = 4/236 (1%)
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
++++FD + + +L + +N NK+A+ LF + R G + +LS +L V
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L GKQ+H ++ G +SV +L+ MY K ++ RVF+ + + VSWTS
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN-VVSWTS 163
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++ Q+GL E+A++LF +M GIKP+ T+ VL G VE+G + + M+
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-S 222
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ T SMV++ ++ ++ +A ++M + V+W S++ A V LDL
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMI-AGFVTNGLDL 276
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 171/373 (45%), Gaps = 72/373 (19%)
Query: 18 HLLQSNLKSRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
H S + + N V +HA ++K S + +L + Y+K + A K+F+ +
Sbjct: 396 HFTYSTILTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDE 455
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
K + +W+ +LS YA+ G ++ A+++F+++
Sbjct: 456 KDIVAWSAMLSGYAQMGDIE-------------------------------GAVKIFLQL 484
Query: 137 VQDQVLPTQFTVTSVLASCTA-LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
++ V P +FT +SVL +C A + GK+ HS +K+G S + V+++L+ MYAK G
Sbjct: 485 AKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRG- 543
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
N+ S N V F + ++RD+V+WNSMI+GY+Q+
Sbjct: 544 --------------NIESANEV----------------FKRQVDRDLVSWNSMISGYAQH 573
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGP 314
G ++L +F M + +L+ D T +SAC + + G++ +++ T
Sbjct: 574 GCGKKSLKIFEEM-RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTME 632
Query: 315 VGNALISCYAKVGGVEIAQKIVEQ----SGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ ++ Y++ G +E A ++ + +G + + + +++G++ + I
Sbjct: 633 HYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLI-- 690
Query: 371 SLRDRDVVAWTAM 383
SL+ +D A+ +
Sbjct: 691 SLQPQDSAAYVLL 703
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 292/808 (36%), Positives = 470/808 (58%), Gaps = 34/808 (4%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNP---------FVGKL--VHARIIKCGL-----HLSVF 49
PP+ ++ L LL L R+ F+ L +HAR++ L H +
Sbjct: 7 PPTAVASLAHQCSLLLRRLAERHSPAPTCPSSSFLRALRCLHARLLTADLLHAPSHPHLT 66
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--N 107
L+ L++ Y + ++ +F P + ++++A+A GRL A F+ +P
Sbjct: 67 LR--LIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPAR 124
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAG-- 164
RD+V ++ + A+ +F ++ L P ++ T+++++ + +L+A
Sbjct: 125 RDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHC 184
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM---AKAVFDGMRLKNVSSWNVVVSLH 221
++H V+K+G + ++V+N+L+ +Y K A+ V D M K+ +W +V +
Sbjct: 185 TQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGY 244
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
+ G ++ AR+ F+++ + V WN+MI+GY Q+G +A +F M+ + + D+FT
Sbjct: 245 VRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEK-VPLDEFTF 303
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEF----DATGPVGNALISCYAKVGGVEIAQKIVE 337
S LSACAN GK +H IIR + +A PV NAL++ Y+K G + IA++I +
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
+ +V+++ T+L GYI G + A +F + ++ ++W M+ GY GL++DA+
Sbjct: 364 TMNLK--DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDAL 421
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
+LF M E KP +YT + ++ L +L HG+Q+HA ++ G +S S NAL+TMY
Sbjct: 422 KLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMY 481
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
+K G +N AR VF L+ ++VSW +MI AL QHG G EA++LF++M+ GI PD I++
Sbjct: 482 AKCGAVNDARLVF-LVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISF 540
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
+ +LTAC H GLV++G Y+ MK I P H+A ++DLLGR+G + EA + I+ MP
Sbjct: 541 LTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMP 600
Query: 578 LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
EP W ++LS CR + +++ G AA++L + P + G Y L N YS+ G+W DAA
Sbjct: 601 FEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAAR 660
Query: 638 IRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPD 697
+RK M+ GVKK G SW+++ +K+HVF V D HP+ +Y + I ++++G+VPD
Sbjct: 661 VRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPD 720
Query: 698 TASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICK 757
T VLHD+E KE +L HSEKLA+ FGL+ P T+ ++KNLR+C DCH+A+ F+ K
Sbjct: 721 TKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSK 780
Query: 758 LVDREIVVRDATRFHHFKKGLCSCRDYW 785
V REIVVRD RFHHFK G CSC +YW
Sbjct: 781 AVGREIVVRDVRRFHHFKDGECSCGNYW 808
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 289/772 (37%), Positives = 452/772 (58%), Gaps = 29/772 (3%)
Query: 33 KLVHARIIKCGL-----HLSVFLKNSLMNFYAKTESISYAKKVF--DEMPVKTLCSWNTI 85
+ +HAR++ L H + L+ L++ Y + + A +F D PV S ++
Sbjct: 41 RCLHARLLTSALLHAPPHPHLTLR--LIHLYTLSRDLPAAATLFCADPCPV----SATSL 94
Query: 86 LSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL- 142
++AYA RL A F+ +P RD+V +I Y A+ +F ++ L
Sbjct: 95 VAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLR 154
Query: 143 PTQFTVTSVLASCTALGDLSA--GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM-- 198
P ++ T++L++ L ++S ++H V+K+G G ++V N+L+ +Y K
Sbjct: 155 PDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATR 214
Query: 199 -AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ V D M K+ +W +V ++ G + AR+ F+++ + V WN+MI+GY +G
Sbjct: 215 DARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGM 274
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF----DATG 313
EA +F M+ + + D+FT S LSACAN+ GK +H IIR + +A
Sbjct: 275 AVEAFELFRRMVLER-VPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAAL 333
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
PV NAL++ Y+K G + +A++I + ++ +V+++ T+L GY++ + A +F+ +
Sbjct: 334 PVNNALVTFYSKCGNIAVARRIFDN--MTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++ ++W M+ GY G +DA++LF M E KP +YT + ++ L +L HGKQ
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H ++ G S S NALITMY++ G + A +F L+ ++VSW +MI AL QHG
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMF-LVMPNIDSVSWNAMISALGQHG 510
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G EA++LF+RM+ GI PD I+++ VLTAC H GLV++G RY+ MK I P H+
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY 570
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
++DLLGRAG + EA + I+ MP EP W ++LS CR +++LG AA++L + P
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTP 630
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
+ G Y L N YS+ G W DAA +RK M+ GVKK G SW++ NKVHVF V D HP
Sbjct: 631 QHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHP 690
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ +Y + + +++++G+VPDT VLHD+E KE +L HSE+LA+ FGL++ P
Sbjct: 691 EAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPG 750
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+ ++KNLR+C+DCH+AI F+ K V REIVVRD RFHHFK G CSC +YW
Sbjct: 751 ATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 284/798 (35%), Positives = 443/798 (55%), Gaps = 109/798 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH ++ G VF+ N+L+ YAK + +K++FDE+
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI---------------- 218
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
P R+ VSW + Y + A+ +F EMV + P +F+++S
Sbjct: 219 ---------------PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSS 263
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +CT L D S GK +H +++K G N+L++MYAKVGD A +VF+ ++ +
Sbjct: 264 MVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPD 323
Query: 211 VSSWNVVVS---LHIHS-------------------------------GRLDL------- 229
+ SWN V++ LH H G +D+
Sbjct: 324 IVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383
Query: 230 --ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
AR F+ + E+D++ WN++I+GYSQ D EAL +F M K+ + ++ TL++ L +
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG-IGFNQTTLSTILKS 442
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
A L+ + + +Q+H +++ F + ++
Sbjct: 443 TAGLQVVHVCRQVHGLSVKSGFHS---------------------------------DIY 469
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
+L+D Y K + A RIF+ D+V++T+M+ Y Q G ++A++LF M
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 529
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
KP+ + S++L+ ++L++ + GKQ+H L+ G + N+L+ MY+K G+I+ A
Sbjct: 530 LKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAG 589
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
R F+ + R VSW++MI LAQHG G +A+QLF +ML+ G+ P+HIT V VL AC H
Sbjct: 590 RAFSELTERG-IVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV + + Y+ M+ + KP H+A M+DLLGRAG + EA + MP E + WG+
Sbjct: 649 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 708
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LL A R+HK+++LG+ AAE L ++EP+ SG + L N+Y+S GKWE+ A +R+ M+ V
Sbjct: 709 LLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKV 768
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
KK G SW+++++KV+ F V D H + IY K+ ++ D + + G+VP LHDVE+
Sbjct: 769 KKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQ 828
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
KE +L HHSEKLA+AFGLI+TP+ +R+ KNLRVC DCH+A K+ICK+V REI+VRD
Sbjct: 829 SEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRD 888
Query: 768 ATRFHHFKKGLCSCRDYW 785
RFHHFK G CSC DYW
Sbjct: 889 INRFHHFKDGSCSCGDYW 906
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 183/625 (29%), Positives = 289/625 (46%), Gaps = 115/625 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ LL +++ G +HA I K GL ++N L+N Y+K YA+K+ DE
Sbjct: 59 YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESS 118
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
D VSW+ +I Y + G A+ F E
Sbjct: 119 -------------------------------EPDLVSWSALISGYAQNGLGGGALMAFHE 147
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M V +FT +SVL +C+ + DL GK+VH VV +G G V V N+L+ MYAK +
Sbjct: 148 MHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDE 207
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +K +FD + +NV SWN + S Y Q
Sbjct: 208 FLDSKRLFDEIPERNVVSWNALFSC-------------------------------YVQX 236
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+ EA+G+F M+ S +KP++F+L+S ++AC L GK IH Y+I+ +D
Sbjct: 237 DFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295
Query: 316 GNALISCYAKVG----GVEIAQKIVEQSGISYLNVIA----------------------- 348
NAL+ YAKVG + + +KI + +S+ VIA
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLH 355
Query: 349 ------------FTT--LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
F + L+D Y K + AR F+ L ++D++AW A++ GY Q +
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 415
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A+ LF M +EG N TLS +L ++ L + +Q+H +++SG S + V N+LI
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 475
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
Y K ++ A R+F + VS+TSMI A AQ+G GEEA++LF M ++ +KPD
Sbjct: 476 DSYGKCSHVEDAERIFEECTI-GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP--TPSHFA--SMVDLLGRAGLLQEAY 570
+L AC + EQG++ + VH +K FA S+V++ + G + +A
Sbjct: 535 FVCSSLLNACANLSAFEQGKQLH-----VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAG 589
Query: 571 NFIENMPLEPDVVAWGSLLSACRVH 595
+ E +V+W +++ H
Sbjct: 590 RAFSELT-ERGIVSWSAMIGGLAQH 613
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 190/406 (46%), Gaps = 74/406 (18%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + + +L+ C L G ++H+ + K+GLS ++ N L+N+Y+K A+ +
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
D + E D+V+W+++I+GY+QNG AL
Sbjct: 114 VD-------------------------------ESSEPDLVSWSALISGYAQNGLGGGAL 142
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M +K ++FT +S L AC+ ++ L++GKQ+H ++ + F+ V N L+
Sbjct: 143 MAFHEM-HLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVM 201
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK LD ++R+FD + +R+VV+W A
Sbjct: 202 YAKC-----------------------DEFLD----------SKRLFDEIPERNVVSWNA 228
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+ Y Q +AV LF MV G KPN ++LS+M++ + L GK IH ++ G
Sbjct: 229 LFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLG 288
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+NAL+ MY+K G++ A VF I + + VSW ++I H E+A++L
Sbjct: 289 YDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELL 347
Query: 503 ERM--------LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
+M +++ ++ D VG++ + L+E + +N++
Sbjct: 348 GQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLL 393
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 179/389 (46%), Gaps = 67/389 (17%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
N++ + P + + LS C + L+ G QIHA+I ++ + N LI+ Y+K
Sbjct: 45 NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
A+K+V++S + D+V+W+A++ G
Sbjct: 105 RXFGYARKLVDESS---------------------------------EPDLVSWSALISG 131
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QNGL A+ F M G K N +T S++L S + L GKQ+H + SG
Sbjct: 132 YAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD 191
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V+N L+ MY+K ++R+F+ I R VSW ++ Q EA+ LF M+
Sbjct: 192 VFVANTLVVMYAKCDEFLDSKRLFDEIPERN-VVSWNALFSCYVQXDFCGEAVGLFYEMV 250
Query: 507 ELGIKPDHITYVGVLTACT-----------HGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
GIKP+ + ++ ACT HG L++ G + P +
Sbjct: 251 LSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW------------DPFSANA 298
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD-----LGKIAAE---K 607
+VD+ + G L +A + E + +PD+V+W ++++ C +H++ + LG++ +
Sbjct: 299 LVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSS 357
Query: 608 LLLIEPDNSGAYS-ALCNLYSSCGKWEDA 635
L+ ++ ++ S L ++YS C EDA
Sbjct: 358 LMKMDMESDLFVSVGLVDMYSKCDLLEDA 386
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/710 (39%), Positives = 419/710 (59%), Gaps = 40/710 (5%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
S + ++S Y L A +F + + ++W ++I + + F A+ FVEM
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV---GDEM 197
P SVL SCT + DL G+ VH F+V+ G+ + N+L+NMYAK+ G ++
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160
Query: 198 MAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
VFD M R N +V I +D R F+ M +DVV++N++IAGY+Q+
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +AL M M + LKPD FTL+S L + + GK+IH Y+IR D+ +
Sbjct: 221 GMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G++L+ YAK +E ++ R+F L R
Sbjct: 280 GSSLVDMYAKSARIEDSE---------------------------------RVFSRLYCR 306
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D ++W +++ GY QNG +A+ LFR MV KP S+++ + LA+L GKQ+H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
LR G S++ +++AL+ MYSK GNI AAR++F+ ++ E VSWT++I+ A HG G
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE-VSWTAIIMGHALHGHG 425
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA+ LFE M G+KP+ + +V VLTAC+H GLV++ Y+N M V+ + H+A+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+ DLLGRAG L+EAYNFI M +EP W +LLS+C VHKNL+L + AEK+ ++ +N
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
GAY +CN+Y+S G+W++ A +R M+ G++K SW++++NK H F D HP
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
D I + + +++++ G+V DT+ VLHDV+E+ K ++L HSE+LA+AFG+I+T TT
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KN+R+C DCH AIKFI K+ +REI+VRD +RFHHF +G CSC DYW
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 222/483 (45%), Gaps = 71/483 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY---AKKVFDEMPVKTLCSWNTILSA 88
G+ VH I++ G+ ++ N+LMN YAK + VFDEMP +T S + + A
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 89 YA--KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+D VF +MP +D VS+ TII Y + G +++A+RM EM + P F
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T++SVL + D+ GK++H +V++ G+ V + +SL++MYAK ++ VF +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
++ SWN +V+ ++ +GR + A F QM+ V
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV------------------------ 339
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
KP +S + ACA+L L LGKQ+H Y++R F + + +AL+ Y+K
Sbjct: 340 --------KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G ++ A R+IFD + D V+WTA+++G
Sbjct: 392 GNIKAA---------------------------------RKIFDRMNVLDEVSWTAIIMG 418
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEAS 445
+ +G +AV LF M R+G KPN A+L+ S + +D S + G
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
L A+ + +AG + A + + W++++ + + H E A ++ E++
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 506 LEL 508
+
Sbjct: 539 FTV 541
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P + S + AHL +L GK +H +++ G ++F+ ++L++ Y+K +
Sbjct: 341 PGAVAFSSVIPACAHLATLHL-------GKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
I A+K+FD M V SW I+ +A G A +F M + + V++ ++
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
+ +G A F M + L + + +A LG ++ ++F+ K C
Sbjct: 454 CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL--LGRAGKLEEAYNFISKM----C 507
Query: 180 VNVTNSL 186
V T S+
Sbjct: 508 VEPTGSV 514
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+ ++ + + S KQ+HA +R+ S S S +I++Y+ ++ A +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLK 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
++W S+I L +A+ F M G PDH + VL +CT
Sbjct: 67 -SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/759 (36%), Positives = 434/759 (57%), Gaps = 60/759 (7%)
Query: 36 HARIIKCGLHLSVFLK---------NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
+ R +C L VF + N +++ Y + A+K+FDEMP + L SWN ++
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
Y + L A E+F +MP RD SW T++ Y + G +A +F M + +
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+++ + + + + + K+ + + N LL + K + A+ FD M
Sbjct: 194 LLSAYVQN--------SKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+++V SWN +++ + SG++D AR FD+ +DV TW +M++GY QN EA +F
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M P++ ++ NA+++ Y +
Sbjct: 306 KM-------PERNEVS---------------------------------WNAMLAGYVQG 325
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+E+A+++ + + NV + T++ GY + G I A+ +FD + RD V+W AM+ G
Sbjct: 326 ERMEMAKELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q+G + +A+ LF M REG + N + S+ LS + + +L+ GKQ+H ++ G +
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V NAL+ MY K G+I A +F + ++ VSW +MI ++HG GE A++ FE M
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G+KPD T V VL+AC+H GLV++G++Y+ M + + P H+A MVDLLGRAGLL
Sbjct: 503 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 562
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
++A+N ++NMP EPD WG+LL A RVH N +L + AA+K+ +EP+NSG Y L NLY
Sbjct: 563 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+S G+W D +R M+ GVKK G+SW++IQNK H F V D HP++D I+ + ++
Sbjct: 623 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 682
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+K+ G+V T+ VLHDVEE+ KE+M+R+HSE+LA+A+G++ +R++KNLRVC
Sbjct: 683 LRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCE 742
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+AIK++ ++ R I++RD RFHHFK G CSC DYW
Sbjct: 743 DCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H R++K G F+ N+L+ Y K SI A +F EM K + SWNT+++ Y+
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + E+ A+R F M ++ + P T+ +
Sbjct: 487 RHG--------------------------FGEV-----ALRFFESMKREGLKPDDATMVA 515
Query: 151 VLASCTALGDLSAGKK 166
VL++C+ G + G++
Sbjct: 516 VLSACSHTGLVDKGRQ 531
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/693 (38%), Positives = 419/693 (60%), Gaps = 35/693 (5%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G ++ A VF+ MP + W +I Y+ +G +A+ M+ EM++ V+P ++T +L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
T + G+++H +VK G S V V N+L+++Y+
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSL-------------------- 166
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SG + +AR FD+ + DVVTWN MI+GY+++ E++ +F M +
Sbjct: 167 -----------SGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
L P TL S LSAC+ L+ L +GK++H Y+ + + + NALI YA G ++ A
Sbjct: 216 VL-PSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
I + + +VI++T ++ G+ +G +G AR FD + +RD V+WTAM+ GY Q
Sbjct: 275 LGIFDN--MKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNR 332
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
K+ + LFR M KP+ +T+ ++L+ + L +L+ G+ I A ++ V NA
Sbjct: 333 FKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNA 392
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MY GN+ A R+FN + R + +SWT++I LA +G GEEA+ +F +ML+ I P
Sbjct: 393 LIDMYFNCGNVEKAIRIFNAMPHR-DKISWTAVIFGLAINGYGEEALDMFSQMLKASITP 451
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D +T +GVL ACTH G+V++G++++ M H I+P +H+ MVDLLGRAG L+EA+
Sbjct: 452 DEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEV 511
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I+NMP++P+ + WGSLL ACRVH++ ++ ++AA+++L +EP+N Y LCN+Y++C +W
Sbjct: 512 IKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRW 571
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
E +RK M G+KKT G S +++ VH F D +HPQ IY+K+ ++ ++K
Sbjct: 572 EKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFA 631
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+ PDT+ V D+ E+ KE + HSEKLAIAFGLIS+ T+RI+KNLR+C DCH
Sbjct: 632 GYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVA 691
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + K+ +RE++VRD TRFHHF+ G CSC+DYW
Sbjct: 692 KLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 248/501 (49%), Gaps = 67/501 (13%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P E+ Y LL+ + G+ +H I+K G +VF++N+L++ Y+ + +S A+
Sbjct: 115 VMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVAR 174
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
V F+ D V+W +I YN +F
Sbjct: 175 GV-------------------------------FDRSSKGDVVTWNVMISGYNRSKQFDE 203
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
++++F EM + +VLP+ T+ SVL++C+ L DL+ GK+VH +V + + N+L++
Sbjct: 204 SMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALID 263
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYA GD A +FD M+ ++V SW +V+ + G++ LAR FD+M ERD V+W +M
Sbjct: 264 MYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAM 323
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I GY Q E L +F M + +++KPD+FT+ S L+ACA+L L+LG+ I AYI + E
Sbjct: 324 IDGYLQVNRFKEVLSLFREM-QAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNE 382
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
VGNALI Y G VE A RI
Sbjct: 383 IKIDSFVGNALIDMYFNCGNVE---------------------------------KAIRI 409
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+++ RD ++WTA++ G NG ++A+++F M++ P+ T +L + +
Sbjct: 410 FNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMV 469
Query: 429 DHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
D GK+ A + G +++ ++ + +AG++ A V + + ++ W S++
Sbjct: 470 DKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLG 529
Query: 488 ALAQHGLGEEAIQLFERMLEL 508
A H E A +++LEL
Sbjct: 530 ACRVHRDEEMAEMAAQQILEL 550
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 156/301 (51%), Gaps = 7/301 (2%)
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
++GD+ AR +FD++ + W M+ GY + G AV ++ M+ G P+ YT
Sbjct: 65 ELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPF 124
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
+L + ++ G+++H ++ G +S++ V NALI +YS +G ++ AR VF+ +
Sbjct: 125 LLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSS-KG 183
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+ V+W MI + +E+++LF+ M + + P IT V VL+AC+ + G+R +
Sbjct: 184 DVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH 243
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+K++ KI+P +++D+ G + A +NM DV++W ++++ N
Sbjct: 244 RYVKDL-KIEPVRVLENALIDMYAACGDMDTALGIFDNMK-SRDVISWTAIVTG---FTN 298
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
L +A + + +++A+ + Y ++++ ++ + M+ +K + F+ V
Sbjct: 299 LGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDE-FTMVS 357
Query: 658 I 658
I
Sbjct: 358 I 358
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 293/793 (36%), Positives = 453/793 (57%), Gaps = 68/793 (8%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N+++ Y + I+ A+K+FD MP + + SWNT+L+ Y ++ A +F MP R+ V
Sbjct: 130 NAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGV 189
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SWT +I Y I + A MF M+ + + P Q + SVL++ LG + +H V
Sbjct: 190 SWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLV 249
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV--FDGMRLKNVSSWNVVVSLHIHSGRLD- 228
KTG V V ++LN Y K + M+ AV F+GM +N +W+ +++ +GR+D
Sbjct: 250 HKTGFERDVVVGTAILNGYTKDVN-MLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDD 308
Query: 229 ----------------------LARAQ--------FDQMIERDVVTWNSMIAGYSQNGYD 258
LAR FDQ+ E +VV+WN+MI GY QN
Sbjct: 309 AFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMV 368
Query: 259 FEALGMFANM------------------------------LKDSSLKPDKFTLASTLSAC 288
EA +F M L + P +L S+ AC
Sbjct: 369 DEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFAC 428
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
+N+E L+ GKQ+H+ ++ V NALI+ Y K + ++I ++ ++ + ++
Sbjct: 429 SNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDR--MTVKDTVS 486
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
+ + + ++ AR +F+++ DVV+WT ++ Q +AVE+FRSM+ E
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN L+ +L +S +L + G+QIH A++ G S L V+NAL++MY K + ++ +
Sbjct: 547 LPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSL-K 605
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF+ + R + +W ++I AQHGLG EAI++++ M+ G+ P+ +T+VG+L AC+H G
Sbjct: 606 VFDSMEER-DIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSG 664
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LV++G +++ M + + + P H+A MVDLLGRAG +Q A +FI +MP+EPD V W +L
Sbjct: 665 LVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSAL 724
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L AC++HKN+++G+ AAEKL IEP N+G Y L N+YSS G W++ A +RK MK GV
Sbjct: 725 LGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVN 784
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G SW+QI+NK+H F D H Q IY + +++ +K G+VPDT VLHD++E+
Sbjct: 785 KDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEE 844
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE L +HSEKLA+A+GL+ TP+ ++IMKNLR+C DCH+ IKF+ + REI VRD
Sbjct: 845 QKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDG 904
Query: 769 TRFHHFKKGLCSC 781
RFHHF+ G CSC
Sbjct: 905 NRFHHFRNGSCSC 917
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/543 (27%), Positives = 259/543 (47%), Gaps = 84/543 (15%)
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ GRL A EVF+ MP RD ++W ++I Y G +A R + + L T +
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNG-MPDAGRSLADAISGGNLRTGTILL 102
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT--NSLLNMYAKVGDEMMAKAVFDGMR 207
S G AG+ + V G+ G N N+++ Y + GD +A+ +FD M
Sbjct: 103 S--------GYARAGRVRDARRVFDGM-GVRNTVAWNAMVTCYVQNGDITLARKLFDAMP 153
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++VSSWN +++ + HS ++ AR F++M ER+ V+W MI+GY A MF
Sbjct: 154 SRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRT 213
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK-V 326
ML + + P++ L S LSA +L K + + IH + +T F+ VG A+++ Y K V
Sbjct: 214 MLCE-GMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDV 272
Query: 327 GGVEIAQKIVE----QSGISYLNVIAF-------------------------TTLLDGYI 357
++ A K E ++ ++ +IA T++L G
Sbjct: 273 NMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLA 332
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM----------VREG 407
+ G I A+ +FD + + +VV+W AM+ GY QN + +A +LF M + G
Sbjct: 333 RYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAG 392
Query: 408 PKPNNYTLSAMLSVS---------------------SSLASLDHGKQIHASALRSGEASS 446
N + A++S+ S++ +L+ GKQ+H+ A+++G +
Sbjct: 393 YARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFN 452
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V NALIT+Y K +I + R++F+ + + +TVS+ S + AL Q+ L +EA +F M
Sbjct: 453 SYVCNALITLYGKYRSIGSVRQIFDRMTVK-DTVSYNSFMSALVQNNLFDEARDVFNNM- 510
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV--HKIKPTPSHFASMVDLLGRAG 564
PD +++ +++AC +QG + +++ + P P ++ L G G
Sbjct: 511 ---PSPDVVSWTTIISACAQA---DQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLG 564
Query: 565 LLQ 567
Q
Sbjct: 565 APQ 567
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 25/284 (8%)
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
++G + AR +FDS+ RD++AW +M+ Y NG+ DA + G N T +
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGM-PDAGRSLADAISGG---NLRTGTI 100
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWR 476
+LS + + +++ G +V+ NA++T Y + G+I AR++F+ + R
Sbjct: 101 LLSGYARAGRVRDARRVF-----DGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSR 155
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ SW +M+ L EEA LFERM E + +++ +++ L+EQ R
Sbjct: 156 -DVSSWNTMLTGYCHSQLMEEARNLFERMPER----NGVSWTVMISGYV---LIEQHGRA 207
Query: 537 YNMMKNVHKIKPTPSH-----FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++M + + TP S V LG+ G+L+ + + E DVV ++L+
Sbjct: 208 WDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNG 267
Query: 592 CRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
K++++ A + + N +S + S G+ +DA
Sbjct: 268 --YTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDA 309
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 40/195 (20%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E PNPP L L L NL + P +G+ +H IK G+ + + N+L++ Y K
Sbjct: 546 ELPNPPILTILLG-----LSGNLGA--PQLGQQIHTIAIKLGMDSGLVVANALVSMYFKC 598
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
S + KVFD M + + +WNTI++ YA+ G
Sbjct: 599 SSAD-SLKVFDSMEERDIFTWNTIITGYAQHG---------------------------- 629
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK-VHSFVVKTGLSGCV 180
+GR AIRM+ MV VLP + T +L +C+ G + G + S GL+ +
Sbjct: 630 -LGR--EAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLL 686
Query: 181 NVTNSLLNMYAKVGD 195
++++ + GD
Sbjct: 687 EHYACMVDLLGRAGD 701
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 289/824 (35%), Positives = 443/824 (53%), Gaps = 136/824 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H + ++ GL V + N ++N YAK SI A++VFD+M K++ SW + YA
Sbjct: 145 GREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYAD 204
Query: 92 QGRLDLACEVFNLM------PNR---------------------------------DSVS 112
GR + A E+F M PNR D+
Sbjct: 205 CGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAV 264
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMV-------------------------------QDQV 141
T ++ Y + G +K+ ++F ++V ++ V
Sbjct: 265 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGV 324
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+P + T +L +C L GK++HS V K G + + V N+L++MY++ G A+
Sbjct: 325 MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARL 384
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFD M + +DV++W +MI G +++G+ EA
Sbjct: 385 VFDKM-------------------------------VRKDVISWTAMIGGLAKSGFGAEA 413
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L ++ M + + ++P++ T S L+AC++ L+ G++IH ++ VGN L++
Sbjct: 414 LTVYQEM-QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVN 472
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+ G V+ A R++FD + RD+VA+
Sbjct: 473 MYSMCGSVKDA---------------------------------RQVFDRMIQRDIVAYN 499
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY + L K+A++LF + EG KP+ T ML+ ++ SL+ ++IH +
Sbjct: 500 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG 559
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S SV NAL++ Y+K G+ + A VF + ++ +SW ++I AQHG G++A+QL
Sbjct: 560 GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHGRGQDALQL 618
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FERM G+KPD +T+V +L+AC+H GL+E+G+RY+ M I PT H+ MVDLLG
Sbjct: 619 FERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLG 678
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L EA I+ MP + + WG+LL ACR+H N+ + + AAE L ++ DN+ Y A
Sbjct: 679 RAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVA 738
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L ++Y++ G W+ AA +RK M+ GV K G SW+Q+ +K+H F ED HPQ + IY +
Sbjct: 739 LSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAE 798
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ +K G+VPDT SV+HDV+E KE + HHSE+LAIA+GLISTP T + I KN
Sbjct: 799 LDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKN 858
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+A KFI K+VDREI+ RD RFHHFK G+CSC DYW
Sbjct: 859 LRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 163/590 (27%), Positives = 282/590 (47%), Gaps = 102/590 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L+ ++ ++ G+ VH II+ + N+L+N Y + SI A++V+ ++
Sbjct: 26 YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLS 85
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
R SW ++V Y + G + A+++ +
Sbjct: 86 YM-----------------------------ERTVHSWNAMVVGYIQYGYIEKALKLLRQ 116
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M Q + P + T+ S L+SC + G L G+++H ++ GL V V N +LNMYAK G
Sbjct: 117 MQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGS 176
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD M K+V SW + + + GR + A F +M + VV
Sbjct: 177 IEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVV------------ 224
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
P++ T S L+A ++ LK GK +H+ I+ ++ V
Sbjct: 225 --------------------PNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAV 264
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G AL+ YAK G SY + R++F+ L +R
Sbjct: 265 GTALVKMYAKCG--------------SYKD-------------------CRQVFEKLVNR 291
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D++AW M+ G + G ++A E++ M REG PN T +L+ + A+L GK+IH
Sbjct: 292 DLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIH 351
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ ++G S + V NALI+MYS+ G+I AR VF+ + R++ +SWT+MI LA+ G G
Sbjct: 352 SRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGGLAKSGFG 410
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA- 554
EA+ +++ M + G++P+ +TY +L AC+ +E G+R + + V T +H
Sbjct: 411 AEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV--VEAGLATDAHVGN 468
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
++V++ G +++A + M ++ D+VA+ +++ H +LGK A
Sbjct: 469 TLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLGKEA 514
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 238/531 (44%), Gaps = 104/531 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL + + S GK +H+R+ K G + ++N+L++ Y++ SI A+ VFD+M
Sbjct: 331 YVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMV 390
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW ++ AK G F A+ ++ E
Sbjct: 391 RKDVISWTAMIGGLAKSG--------FG-----------------------AEALTVYQE 419
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M Q V P + T TS+L +C++ L G+++H VV+ GL+ +V N+L+NMY+ G
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGS 479
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF D+MI+RD+V +N+MI GY+ +
Sbjct: 480 VKDARQVF-------------------------------DRMIQRDIVAYNAMIGGYAAH 508
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F + L++ LKPDK T + L+ACAN L+ ++IH + + F + V
Sbjct: 509 NLGKEALKLF-DRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSV 567
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNAL+S YAK G A +F+ + R
Sbjct: 568 GNALVSTYAKC---------------------------------GSFSDASIVFEKMTKR 594
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+V++W A++ G Q+G +DA++LF M EG KP+ T ++LS S L+ G++
Sbjct: 595 NVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYF 654
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
S + ++ ++ + +AG ++ A + + ++ T W +++ A HG
Sbjct: 655 CSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHG- 713
Query: 495 GEEAIQLFERMLELGIKPD---HITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+ + ER E +K D + YV + G+ + + +M+
Sbjct: 714 ---NVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQ 761
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 392 LNKD-AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ KD AV++ + + ++G + N+ ML + L G+Q+H ++
Sbjct: 2 IEKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV 61
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI MY + G+I AR+V+ + + + TV SW +M+V Q+G E+A++L +M + G
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYY-------------------NMMKNVHKIKPTP 550
+ PD T + L++C G +E G+ + NM I+
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 551 SHFASM---------VDLLGRA--GLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHK 596
F M + + G A G + A+ + M E P+ + + S+L+A
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241
Query: 597 NLDLGKIAAEKLLLIEPDNSGAY-SALCNLYSSCGKWEDAANI 638
L GK ++L ++ A +AL +Y+ CG ++D +
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQV 284
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 286/772 (37%), Positives = 449/772 (58%), Gaps = 29/772 (3%)
Query: 33 KLVHARIIKCGL-----HLSVFLKNSLMNFYAKTESISYAKKVF--DEMPVKTLCSWNTI 85
+ +HAR++ L H + L+ L++ Y + + A +F D PV ++
Sbjct: 41 RCLHARLLTSALLHAPPHPHLTLR--LIHLYTLSGDLPAAATLFRADPCPVAA----TSL 94
Query: 86 LSAYAKQGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL- 142
++AYA GRL A F+ +P RD+V +I Y A+ +F ++ L
Sbjct: 95 VAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLR 154
Query: 143 PTQFTVTSVLASCTALGDLSAGK--KVHSFVVKTGLSGCVNVTNSLLNMYAK---VGDEM 197
P ++ T++L++ L ++S ++ V+K+G G ++V+N+L+ +Y K +
Sbjct: 155 PDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATR 214
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ V D M K+ +W +V ++ G + AR+ F+++ + V WN+MI+GY +G
Sbjct: 215 DARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGM 274
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF----DATG 313
EA +F M+ + + D+FT S LSACAN GK +H I R + +A
Sbjct: 275 VVEAFELFRRMVLER-VPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAAL 333
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
PV NAL++ Y+K G + +A++I + + +V+++ T+L GY++ + A +F+ +
Sbjct: 334 PVNNALVTLYSKCGNIAVARRIFDN--MKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++ ++W M+ GY G ++DA++LF M E KP +YT + +S L SL HGKQ
Sbjct: 392 YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H ++ G S S NALITMY++ G + A +F L+ ++VSW +MI AL QHG
Sbjct: 452 LHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMF-LVMPNIDSVSWNAMISALGQHG 510
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G EA++LF+RM+ GI PD I+++ VLTAC H GLV++G +Y+ MK I P H+
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
++DLLGRAG + EA + I+ MP EP W ++LS CR +++LG AA++L + P
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTP 630
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
+ G Y L N YS+ G+W DAA +RK M+ GVKK G SW++ NKVHVF V D HP
Sbjct: 631 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHP 690
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ +Y + + ++++G+VPDT VLHD+E KE +L HSE+LA+ FGL+ P
Sbjct: 691 EAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPG 750
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+ ++KNLR+C+DCH+ + F+ K V REIVVRD RFHHFK G CSC +YW
Sbjct: 751 ATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H +++ G S N+L+ YA+ ++ A +F MP SWN ++SA +
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G A E+F+ M D +S+ T++ N G + F M +D
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRD 560
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 275/697 (39%), Positives = 421/697 (60%), Gaps = 66/697 (9%)
Query: 92 QGRLDL--ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+GR DL A +VF MP R++V+WT +I + G AI +F+EM+ P +FT++
Sbjct: 216 KGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLS 275
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
V+++C + L G+++HS ++ GL+ V L+NMYAK +
Sbjct: 276 GVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD------------- 322
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEALGMFANM 268
G + AR FDQ+++ +V +W +MI GY Q GYD EAL +F M
Sbjct: 323 ---------------GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + + P+ FT +STL ACANL L++G+Q+ + ++ F + V N+LIS YA+
Sbjct: 368 IL-THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS-- 424
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
G I AR+ FD L +++++++ ++ Y
Sbjct: 425 -------------------------------GRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+N +++A+ELF + +G + +T +++LS ++S+ ++ G+QIHA ++SG + S
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V NALI+MYS+ GNI +A +VF + R +SWTS+I A+HG +A++LF +MLE
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRN-VISWTSIITGFAKHGFATQALELFHKMLEE 572
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G++P+ +TY+ VL+AC+H GLV +G +++ M H + P H+A MVD+LGR+G L E
Sbjct: 573 GVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSE 632
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI +MP + D + W + L ACRVH NL+LGK AA+ ++ EP + AY L NLY+S
Sbjct: 633 AIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAS 692
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
KW++ +NIRK+MK + K G SWV+++NKVH F V D HP+ IY+++ + +
Sbjct: 693 TSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVK 752
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IK++G+VP+ VLHDVEE+ KE++L HSEK+A+AFGLIST + +R+ KNLR+C DC
Sbjct: 753 IKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDC 812
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HSAIK+I REI+VRDA RFHH K G CSC +YW
Sbjct: 813 HSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 160/591 (27%), Positives = 291/591 (49%), Gaps = 108/591 (18%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L+ Y+ L+ +++R+ +G LVH ++ + L L NSL
Sbjct: 66 LQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL------------------ 107
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM-PNRDSVSWTTIIVTYNEIGRFKNAIR 131
+S Y+K G+ + A +F LM +RD +SW+ ++ + A+
Sbjct: 108 -------------ISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMY 190
FV+M+++ P ++ + +C+ +S G + FVVKTG L V V L++M+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMF 214
Query: 191 AK-VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
K GD + A VF+ M ER+ VTW MI
Sbjct: 215 VKGRGDLVSAFKVFEKMP-------------------------------ERNAVTWTLMI 243
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
Q GY EA+ +F M+ S +PD+FTL+ +SACAN+E L LG+Q+H+ IR
Sbjct: 244 TRLMQFGYAGEAIDLFLEMIL-SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGL 302
Query: 310 DATGPVGNALISCYAKV---GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
VG LI+ YAK G + A+KI +Q +LD
Sbjct: 303 TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ-------------ILD------------ 337
Query: 367 RIFDSLRDRDVVAWTAMLVGY-EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
+V +WTAM+ GY ++ G +++A++LFR M+ PN++T S+ L ++L
Sbjct: 338 --------HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL 389
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
A+L G+Q+ A++ G +S V+N+LI+MY+++G I+ AR+ F+++ + + +S+ ++
Sbjct: 390 AALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FEKNLISYNTV 448
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVH 544
I A A++ EEA++LF + + G+ T+ +L+ G + +G++ + ++K+
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
K+ + + +++ + R G ++ A+ E+M + +V++W S+++ H
Sbjct: 509 KLNQSVCN--ALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 238/579 (41%), Gaps = 118/579 (20%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR AI MV P T + L C G VH + ++ L
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
NSL+++Y+K G A ++F M RD++
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMG------------------------------SSRDLI 134
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W++M++ ++ N F AL F +M+++ P+++ A+ AC+ E + +G I +
Sbjct: 135 SWSAMVSCFANNNMGFRALLTFVDMIEN-GYYPNEYCFAAATRACSTAEFVSVGDSIFGF 193
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK-IGDI 362
+++T + + + + C L+D ++K GD+
Sbjct: 194 VVKTGYLQS----DVCVGC----------------------------GLIDMFVKGRGDL 221
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A ++F+ + +R+ V WT M+ Q G +A++LF M+ G +P+ +TLS ++S
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRVFNLIHWRQET 479
+++ L G+Q+H+ A+R G V LI MY+K G++ AAR++F+ I
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNV 340
Query: 480 VSWTSMIVALAQH-GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
SWT+MI Q G EEA+ LF M+ + P+H T+ L AC + + G++ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF- 399
Query: 539 MMKNVHKIKPTPSHF----ASMVDLLGRAGLLQEA------------------------- 569
H +K S S++ + R+G + +A
Sbjct: 400 ----THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKN 455
Query: 570 ---------YNFIENMPLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAY 619
+N IE+ + + SLLS + G +I A + N
Sbjct: 456 LNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVC 515
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+AL ++YS CG E A + + M+ V SW I
Sbjct: 516 NALISMYSRCGNIESAFQVFEDMEDRNV-----ISWTSI 549
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 216/480 (45%), Gaps = 104/480 (21%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE---SISYAKKVFDEMPVKTLCSWNTIL 86
+G+ +H++ I+ GL L + L+N YAK S+ A+K+FD++
Sbjct: 288 LLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI------------ 335
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF-KNAIRMFVEMVQDQVLPTQ 145
LD + SWT +I Y + G + + A+ +F M+ V+P
Sbjct: 336 --------LD-----------HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH 376
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT +S L +C L L G++V + VK G S V NSL++MYA+ G A+ FD
Sbjct: 377 FTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDI 436
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+ E++++++N++I Y++N EAL +F
Sbjct: 437 L-------------------------------FEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
N ++D + FT AS LS A++ + G+QIHA +I++ V NALIS Y++
Sbjct: 466 -NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSR 524
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A ++ E + NVI++T+++ G+ K
Sbjct: 525 CGNIESAFQVFED--MEDRNVISWTSIITGFAK--------------------------- 555
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEA 444
+G A+ELF M+ EG +PN T A+LS S + ++ G K + G
Sbjct: 556 ----HGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQL 501
+ ++ + ++G+++ A + N + ++ + + W + + A HG LG+ A ++
Sbjct: 612 PRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 4/212 (1%)
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
T L+ NG A+ MV +G P+ T S L S D G +H +
Sbjct: 35 TGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQ 94
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
S N+LI++YSK G A +F L+ ++ +SW++M+ A + +G A+
Sbjct: 95 SDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
F M+E G P+ + AC+ V G + + ++ ++D+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMF 214
Query: 561 --GRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
GR G L A+ E MP E + V W +++
Sbjct: 215 VKGR-GDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/851 (36%), Positives = 458/851 (53%), Gaps = 152/851 (17%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL++ + + N +GK HARI+ G FL N+L+ Y+K S+S A++VFD P +
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 79 LCSWNTILSAYA-----KQGRLDLACEVFNLMPNRDSVSWTT------------------ 115
L +WN IL AYA G +F L+ R S+ TT
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLL--RASLGSTTRMTLAPVLKLCLNSGCLW 200
Query: 116 -----------------------IIVTYNEIGRFKNAIRMFVEMVQDQVL---------- 142
++ Y++ GR ++A +F M + V+
Sbjct: 201 AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 260
Query: 143 ---------------------PTQFTVTSVLASCTALG--DLSAGKKVHSFVVKTGLSGC 179
P +F+V +L C G DL GK+VH VK+GL
Sbjct: 261 QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSD 320
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V+V NSL+NMY+K+G A+ VF+ M+ H+
Sbjct: 321 VSVANSLVNMYSKMGCAYFAREVFNDMK-------------HL----------------- 350
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS-TLS----ACANLEKL 294
D+++WNSMI+ +Q+ + E++ +F ++L + LKPD FTLAS TL+ AC L L
Sbjct: 351 -DLISWNSMISSCAQSSLEEESVNLFIDLLHE-GLKPDHFTLASITLATAAKACGCLVLL 408
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
GKQIHA+ I+ FD+ V SGI LD
Sbjct: 409 DQGKQIHAHAIKAGFDSDLHV----------------------NSGI-----------LD 435
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
YIK GD+ A +F+ + D VAWT+M+ G NG A+ ++ M + P+ YT
Sbjct: 436 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 495
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+ ++ SS + +L+ G+Q+HA+ ++ S V +L+ MY+K GNI A R+F ++
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R + W +M+V LAQHG EEA+ LF+ M GI+PD ++++G+L+AC+H GL +
Sbjct: 556 VRNIAL-WNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 614
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
Y + M N + I+P H++ +VD LGRAGL+QEA IE MP + +LL ACR+
Sbjct: 615 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRI 674
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
+++ GK A +L +EP +S AY L N+Y++ +W+D + RK MK VKK GFS
Sbjct: 675 QGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFS 734
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQML 714
W+ ++N +H+F V+D HPQ D IY+K+ ++ I+E G+VPDT VL DVE++ KE+ L
Sbjct: 735 WIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSL 794
Query: 715 RHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
+HSEKLAIA+GLISTP +TT+R++KNLRVC DCH+AIK+I K+ +REIV+RDA RFHHF
Sbjct: 795 YYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHF 854
Query: 775 KKGLCSCRDYW 785
+ G+CSC DYW
Sbjct: 855 RDGVCSCGDYW 865
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 280/769 (36%), Positives = 431/769 (56%), Gaps = 97/769 (12%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A LL + + GK +H+ +IK G+ + ++ SL++ Y K FD
Sbjct: 318 ASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKC---------FD---- 364
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
++ A E F + V W ++V Y ++G + +F++M
Sbjct: 365 ------------------IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM 406
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ ++P Q+T S+L +CT+LG L G+++H+ V+K+G V V + L++MYAK
Sbjct: 407 QIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK---- 462
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
G LD AR ++ E DVV+W +MIAGY+Q+
Sbjct: 463 ---------------------------HGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
EAL +F M ++ ++ D +S +SACA ++ L G+QIHA + + +G
Sbjct: 496 LFAEALKLFQEM-ENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
NAL+S YA+ G + D Y+ F+ + +D
Sbjct: 555 NALVSLYARCGRAQ-----------------------DAYLA----------FEKIDAKD 581
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
++W A++ G+ Q+G ++A+++F M + G + N +T + +S +++ A++ GKQIHA
Sbjct: 582 NISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHA 641
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+++G S SN LIT+YSK G+I A+R F + + VSW +MI +QHG G
Sbjct: 642 MMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQHGYGS 700
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA+ LFE M +LG+ P+H+T+VGVL+AC+H GLV +G Y+ M H + P P H+ +
Sbjct: 701 EAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCV 760
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLLGRA LL A FIE MP+EPD + W +LLSAC VHKN+++G+ AA LL +EP++S
Sbjct: 761 VDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDS 820
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
Y L N+Y+ GKW+ R+ MK GVKK G SW++++N +H F V D LHP +
Sbjct: 821 ATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAE 880
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
IY + + + E+G+V D ++L+DVE++ K+ HSEKLA+AFGL+S +
Sbjct: 881 QIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPI 940
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R++KNLRVCNDCH+ IKF+ K+ +R IVVRDA RFHHF+ G+CSC+DYW
Sbjct: 941 RVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 181/652 (27%), Positives = 297/652 (45%), Gaps = 122/652 (18%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y+K G +DLA VF + +DSVSW +I ++ GR AI +F +M + V+
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + +SVL++CT + G+++H F+VK GLS V N+L+ +Y++ G+ + A+ +
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M ++ S+ NS+I+G +Q G+ AL
Sbjct: 271 FSKMHRRDRISY-------------------------------NSLISGLAQRGFSDRAL 299
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M D +KPD T+AS LSACA++ GKQ+H+Y+I+ +
Sbjct: 300 QLFEKMQLD-CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSS----------- 347
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
++I +LLD Y+K DI A F + +VV W
Sbjct: 348 ----------------------DLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNV 385
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
MLV Y Q G ++ +F M EG PN YT ++L +SL +LD G+QIH ++SG
Sbjct: 386 MLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSG 445
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ V + LI MY+K G ++ AR + + ++ VSWT+MI QH L EA++LF
Sbjct: 446 FQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQHDLFAEALKLF 504
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M GI+ D+I + ++AC + QGQ+ + + S ++V L R
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQQIH-AQSYISGYSEDLSIGNALVSLYAR 563
Query: 563 AGLLQEAYNFIENMP----------------------------------LEPDVVAWGSL 588
G Q+AY E + +E ++ +GS
Sbjct: 564 CGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSA 623
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDN-SGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
+SA N+ GK ++ D+ + A + L LYS CG EDA ++ +
Sbjct: 624 VSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKR-----EFFEM 678
Query: 648 KKTQGFSWVQIQNKV--HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPD 697
+ SW + H +G E +++E+K++G +P+
Sbjct: 679 PEKNVVSWNAMITGYSQHGYGSE-------------AVSLFEEMKQLGLMPN 717
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 161/658 (24%), Positives = 285/658 (43%), Gaps = 132/658 (20%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
++ Y L + S + K +HARI K G L + L++ Y + A K+FD
Sbjct: 10 VQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFD 69
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
++P + WN ++S + LA +V L
Sbjct: 70 DIPSSNVSFWNKVISGLLAK---KLASQVLGL---------------------------- 98
Query: 133 FVEMVQDQVLPTQFTVTSVLASCT-ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
F M+ + V P + T SVL +C+ +++H+ ++ G V N L+++Y+
Sbjct: 99 FSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYS 158
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K G +AK VF+ + LK+ SW ++S G
Sbjct: 159 KNGHVDLAKLVFERLFLKDSVSWVAMIS-------------------------------G 187
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
SQNG + EA+ +F M K S++ P + +S LSAC +E KLG+Q+H +I++ +
Sbjct: 188 LSQNGREDEAILLFCQMHK-SAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSS 246
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
V NAL++ Y++ G N+IA A +IF
Sbjct: 247 ETFVCNALVTLYSRWG-----------------NLIA----------------AEQIFSK 273
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ RD +++ +++ G Q G + A++LF M + KP+ T++++LS +S+ + G
Sbjct: 274 MHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG 333
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
KQ+H+ ++ G +S L + +L+ +Y K +I A F L + V W M+VA Q
Sbjct: 334 KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYF-LTTETENVVLWNVMLVAYGQ 392
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK------NVHK 545
G E+ +F +M G+ P+ TY +L CT G ++ G++ + + NV+
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452
Query: 546 IKPTPSHFASMVDLLGRAGLLQ---------------------------EAYNFIENMPL 578
+A +L G+LQ + + +EN +
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512
Query: 579 EPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
D + + S +SAC + L+ G +I A+ + ++ +AL +LY+ CG+ +DA
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDA 570
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 236/503 (46%), Gaps = 77/503 (15%)
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
GC N + SLL+ AK + K+ FDG + + ++ +++ G +D A FD
Sbjct: 17 FEGCFN-SGSLLD--AKKLHARIFKSGFDGEDVLG----SRLIDIYLAHGEVDNAIKLFD 69
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK-L 294
+ +V WN +I+G + LG+F+ M+ ++ + PD+ T AS L AC+ +
Sbjct: 70 DIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITEN-VTPDESTFASVLRACSGGKAPF 128
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
++ +QIHA II F ++ V N LI Y+K G V++
Sbjct: 129 QVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDL----------------------- 165
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
A+ +F+ L +D V+W AM+ G QNG +A+ LF M + P Y
Sbjct: 166 ----------AKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV 215
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
S++LS + + G+Q+H ++ G +S V NAL+T+YS+ GN+ AA ++F+ +H
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R++ +S+ S+I LAQ G + A+QLFE+M +KPD +T +L+AC G +G+
Sbjct: 276 -RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGK 334
Query: 535 RYY-------------------NMMKNVHKIKPTPSHFAS-----------MVDLLGRAG 564
+ + ++ I+ +F + M+ G+ G
Sbjct: 335 QLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLG 394
Query: 565 LLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYS 620
L E+Y M +E P+ + S+L C LDLG +I + + N S
Sbjct: 395 NLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS 454
Query: 621 ALCNLYSSCGKWEDAANIRKSMK 643
L ++Y+ G+ + A I + ++
Sbjct: 455 VLIDMYAKHGELDTARGILQRLR 477
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M G + N T + + SL K++HA +SG + + LI +Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 463 INAARRVFNLIHWRQETVS-WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
++ A ++F+ I VS W +I L L + + LF M+ + PD T+ VL
Sbjct: 61 VDNAIKLFDDI--PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC+ G Q + H +P ++DL + G + A E + L+ D
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK-D 177
Query: 582 VVAWGSLLSA 591
V+W +++S
Sbjct: 178 SVSWVAMISG 187
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 280/756 (37%), Positives = 427/756 (56%), Gaps = 97/756 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +HA K G + ++ +L+N YAK I A F E V+ + WN +L AY
Sbjct: 389 FSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY 448
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G LD +N+ R+F +M ++++P Q+T
Sbjct: 449 ---GLLD----------------------------DLRNSFRIFRQMQIEEIVPNQYTYP 477
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +C LGDL G+++HS ++KT V + L++MYAK+G K
Sbjct: 478 SILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLG--------------K 523
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++W++++ + +DVV+W +MIAGY+Q +D +AL F ML
Sbjct: 524 LDTAWDILI-----------------RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
D ++ D+ L + +SACA L+ LK G+QIHA + F + P NAL++ Y+K G +
Sbjct: 567 -DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNI 625
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E A YL F+ D +AW A++ G++Q
Sbjct: 626 EEA----------YL-----------------------AFEQTEAGDNIAWNALVSGFQQ 652
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G N++A+ +F M REG NN+T + + +S A++ GKQ+HA ++G S V
Sbjct: 653 SGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 712
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NA+I+MY+K G+I+ A++ F + + E VSW +MI A ++HG G EA+ F++M+
Sbjct: 713 CNAIISMYAKCGSISDAKKQFLELSMKNE-VSWNAMINAYSKHGFGSEALDSFDQMIHSN 771
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P+H+T VGVL+AC+H GLV++G Y+ M + + P P H+ +VD+L RAGLL A
Sbjct: 772 VRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRA 831
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+FI MP+EPD + W +LLSAC VHKN+++G+ AA LL +EP++S Y L NLY+ C
Sbjct: 832 KDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVC 891
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KW+ R+ MK GVKK G SW++++N +H F V D HP D I+ +
Sbjct: 892 RKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRA 951
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
E+G+V D S+L +++++ K+ + HSEKLAI+FGL+S P + +MKNLRVCNDCH
Sbjct: 952 SEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCH 1011
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IKF+ K+ +REI+VRDA RFHHF+ G CSC+DYW
Sbjct: 1012 DWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 256/558 (45%), Gaps = 101/558 (18%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HARII GL S + N L++ Y++ + A++VFD + +K SW ++S +K
Sbjct: 192 IHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKN-- 249
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
CEV AIR+F +M ++PT + +SVL++
Sbjct: 250 ---ECEV--------------------------EAIRLFCDMYVLGIMPTPYAFSSVLSA 280
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C + L G+++H V+K G S V N+L+++Y +G + A+ +F M
Sbjct: 281 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS------- 333
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+RD VT+N++I G SQ GY +A+ +F M D L
Sbjct: 334 ------------------------QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLD-GL 368
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PD TLAS + AC++ L G+Q+HAY + F + + AL++ YAK +E A
Sbjct: 369 EPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALN 428
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
++ + NV+ + +L Y + D+ + RIF ++ ++V
Sbjct: 429 YFLETEVE--NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV---------------- 470
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
PN YT ++L L L+ G+QIH+ +++ + V + LI
Sbjct: 471 ---------------PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLI 515
Query: 455 TMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
MY+K G ++ A + LI + ++ VSWT+MI Q+ ++A+ F +ML+ GI+ D
Sbjct: 516 DMYAKLGKLDTAWDI--LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 573
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
+ ++AC +++GQ+ + V ++V L + G ++EAY
Sbjct: 574 EVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAF 632
Query: 574 ENMPLEPDVVAWGSLLSA 591
E D +AW +L+S
Sbjct: 633 EQTE-AGDNIAWNALVSG 649
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 241/513 (46%), Gaps = 68/513 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++S Y G L A +F+ M RD+V++ T+I ++ G + A+ +F M D +
Sbjct: 310 NALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLE 369
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+ S++ +C++ G L +G+++H++ K G + + +LLN+YAK D A
Sbjct: 370 PDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNY 429
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F ++NV WNV++ + G LD R F
Sbjct: 430 FLETEVENVVLWNVML---VAYGLLDDLRNSFR--------------------------- 459
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + + P+++T S L C L L+LG+QIH+ II+T F V + LI
Sbjct: 460 -IFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDM 517
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK+G ++ A I +I F +DVV+WT
Sbjct: 518 YAKLGKLDTAWDI----------LIRFA-----------------------GKDVVSWTT 544
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY Q + A+ FR M+ G + + L+ +S + L +L G+QIHA A SG
Sbjct: 545 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 604
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+S L NAL+T+YSK GNI A F + ++W +++ Q G EEA+++F
Sbjct: 605 FSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE-AGDNIAWNALVSGFQQSGNNEEALRVF 663
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
RM GI ++ T+ + A + ++QG++ + ++ T A ++ + +
Sbjct: 664 ARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-IISMYAK 722
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
G + +A + ++ + V+W ++++A H
Sbjct: 723 CGSISDAKKQFLELSMKNE-VSWNAMINAYSKH 754
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 157/619 (25%), Positives = 278/619 (44%), Gaps = 113/619 (18%)
Query: 19 LLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL+ LK+ G+ +H++I+K G + L L++FY + A KVFDEMP +
Sbjct: 73 LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPER 132
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
T+ +WN ++ A + L+ +VF L F MV
Sbjct: 133 TIFTWNKMIKELASRS---LSGKVFCL----------------------------FGRMV 161
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ V P + T + VL +C G ++ +++H+ ++ GL V N L+++Y++ G
Sbjct: 162 NENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGF 220
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFDG+ LK+ SS W +MI+G S+N
Sbjct: 221 VDRARRVFDGLYLKDHSS-------------------------------WVAMISGLSKN 249
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+ EA+ +F +M + P + +S LSAC +E L++G+Q+H +++ F + V
Sbjct: 250 ECEVEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 308
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+S Y +G + A+ I F ++ R
Sbjct: 309 CNALVSLYFHLGSLISAEHI---------------------------------FSNMSQR 335
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V + ++ G Q G + A+ELF+ M +G +P++ TL++++ SS +L G+Q+H
Sbjct: 336 DAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLH 395
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A + G AS+ + AL+ +Y+K +I A F L + V W M+VA
Sbjct: 396 AYTTKLGFASNDKIEGALLNLYAKCSDIETALNYF-LETEVENVVLWNVMLVAYGLLDDL 454
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFA 554
+ ++F +M I P+ TY +L C G +E G++ ++ ++K ++ +
Sbjct: 455 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVC--S 512
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---I 611
++D+ + G L A++ + DVV+W +++ A N D + + +L I
Sbjct: 513 VLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMI-AGYTQYNFDDKALTTFRQMLDRGI 570
Query: 612 EPDNSGAYSALCNLYSSCG 630
D G L N S+C
Sbjct: 571 RSDEVG----LTNAVSACA 585
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/563 (25%), Positives = 239/563 (42%), Gaps = 104/563 (18%)
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL-GDLSAGKKVHSF 170
S+T I V+ +E F+ VE + P T+ +L C G L G+K+HS
Sbjct: 36 SFTAISVSISEDESFQENGIDSVENCG--IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQ 93
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
++K G ++ LL+ Y GD LD A
Sbjct: 94 ILKLGFDNNACLSEKLLDFYLFKGD-------------------------------LDGA 122
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC-A 289
FD+M ER + TWN MI + + +F M+ ++ + P++ T + L AC
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNEN-VTPNEGTFSGVLEACRG 181
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ +QIHA II + V N LI Y++ G V+
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVD------------------- 222
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
ARR+FD L +D +W AM+ G +N +A+ LF M G
Sbjct: 223 --------------RARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIM 268
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P Y S++LS + SL+ G+Q+H L+ G +S V NAL+++Y G++ +A +
Sbjct: 269 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHI 328
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ + R + V++ ++I L+Q G GE+A++LF+RM G++PD T ++ AC+ G
Sbjct: 329 FSNMSQR-DAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGT 387
Query: 530 VEQGQRYY-------------------NMMKNVHKIKPTPSHFAS-----------MVDL 559
+ GQ+ + N+ I+ ++F M+
Sbjct: 388 LFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVA 447
Query: 560 LGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-N 615
G L+ ++ M +E P+ + S+L C +L+LG+ +++ N
Sbjct: 448 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLN 507
Query: 616 SGAYSALCNLYSSCGKWEDAANI 638
+ S L ++Y+ GK + A +I
Sbjct: 508 AYVCSVLIDMYAKLGKLDTAWDI 530
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 224/515 (43%), Gaps = 107/515 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P ++ Y +L++ ++ + +G+ +H++IIK L+ ++ + L++ YAK + A
Sbjct: 469 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAW 528
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+ K + SW T+++ Y + D A F M +R + +E+G
Sbjct: 529 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG--------IRSDEVG---- 576
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+T+ +++C L L G+++H+ +G S + N+L+
Sbjct: 577 -------------------LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 617
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+Y+K G+ ++ A F+Q D + WN++
Sbjct: 618 LYSKCGN-------------------------------IEEAYLAFEQTEAGDNIAWNAL 646
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
++G+ Q+G + EAL +FA M ++ + + FT S + A + +K GKQ+HA I +T
Sbjct: 647 VSGFQQSGNNEEALRVFARMNRE-GIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTG 705
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+D+ V NA+IS YAK G I A++
Sbjct: 706 YDSETEVCNAIISMYAKCGS---------------------------------ISDAKKQ 732
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F L ++ V+W AM+ Y ++G +A++ F M+ +PN+ TL +LS S + +
Sbjct: 733 FLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 792
Query: 429 DHGKQIHASA-LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
D G + S G A ++ M ++AG ++ A+ + + + W +++
Sbjct: 793 DKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLS 852
Query: 488 ALAQHG---LGEEAIQLFERMLELGIKP-DHITYV 518
A H +GE A +LEL +P D TYV
Sbjct: 853 ACVVHKNMEIGEFAAH---HLLEL--EPEDSATYV 882
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 303/825 (36%), Positives = 447/825 (54%), Gaps = 131/825 (15%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+ G+ +H + IK G V + SL++ Y K + +KVFDEM
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK------------ 155
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
R+ V+WTT+I Y + +F+ M + P FT
Sbjct: 156 -------------------ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT 196
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ L G G +VH+ VVK GL + V+NSL+N+Y K G+
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN------------ 244
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ AR FD+ + VVTWNSMI+GY+ NG D EALGMF +
Sbjct: 245 -------------------VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI----------IRTE--------- 308
M + + ++ + + AS + CANL++L+ +Q+H + IRT
Sbjct: 286 M-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 309 --------FDATGPVGN-----ALISCYAKVGGVEIA--------QKIVEQSGISY---- 343
F G VGN A+IS + + G E A +K V + +Y
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 344 --LNVIA-------------------FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
L VI+ T LLD Y+K+G + A ++F + D+D+VAW+A
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL-ASLDHGKQIHASALRS 441
ML GY Q G + A+++F + + G KPN +T S++L+V ++ AS+ GKQ H A++S
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
SSL VS+AL+TMY+K GNI +A VF ++ VSW SMI AQHG +A+ +
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + +K D +T++GV ACTH GLVE+G++Y+++M KI PT H + MVDL
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L++A IENMP W ++L+ACRVHK +LG++AAEK++ ++P++S AY
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ G W++ A +RK M VKK G+SW++++NK + F D HP +D IY K
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + +K++G+ PDT+ VL D++++ KE +L HSE+LAIAFGLI+TP+ + L I+KN
Sbjct: 764 LEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKN 823
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK-GLCSCRDYW 785
LRVC DCH IK I K+ +REIVVRD+ RFHHF G+CSC D+W
Sbjct: 824 LRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 226/498 (45%), Gaps = 71/498 (14%)
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
RL A +F+ P RD S+ +++ ++ GR + A R+F+ + + + +SVL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
L D G+++H +K G V+V SL++ Y K + + VFD M+ +N
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN--- 158
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
VVTW ++I+GY++N + E L +F M ++
Sbjct: 159 ----------------------------VVTWTTLISGYARNSMNDEVLTLFMRM-QNEG 189
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+P+ FT A+ L A G Q+H +++ D T PV N+LI+ Y K G V
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR--- 246
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
AR +FD + VV W +M+ GY NGL+
Sbjct: 247 ------------------------------KARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+A+ +F SM + + + ++++ + ++L L +Q+H S ++ G ++ AL
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ YSK + A R+F I VSWT+MI Q+ EEA+ LF M G++P+
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
TY +LTA ++ + + ++K ++ T +++D + G ++EA
Sbjct: 397 EFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVF 451
Query: 574 ENMPLEPDVVAWGSLLSA 591
+ + D+VAW ++L+
Sbjct: 452 SGID-DKDIVAWSAMLAG 468
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 35/305 (11%)
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
+ S RL A FD+ RD ++ S++ G+S++G EA +F N+ + ++ D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR-LGMEMDCSIF 96
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+S L A L G+Q+H I+ F VG +L+ Y K + +K+ ++ +
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE--M 154
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
NV+ +TTL+ GY + N +N + + LF
Sbjct: 155 KERNVVTWTTLISGYAR-------------------------------NSMNDEVLTLFM 183
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M EG +PN++T +A L V + G Q+H +++G ++ VSN+LI +Y K G
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 243
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
N+ AR +F+ + V+W SMI A +GL EA+ +F M ++ ++ V+
Sbjct: 244 NVRKARILFDKTEVKS-VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 522 TACTH 526
C +
Sbjct: 303 KLCAN 307
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 130/255 (50%), Gaps = 12/255 (4%)
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+G++ + + F G + + A +FD RD ++ ++L G+ ++G ++A
Sbjct: 25 NGVAQVRIYCF-----GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKR 79
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
LF ++ R G + + S++L VS++L G+Q+H ++ G +SV +L+ Y
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K N R+VF+ + R V+WT++I A++ + +E + LF RM G +P+ T+
Sbjct: 140 KGSNFKDGRKVFDEMKERN-VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 519 GVLTACTHGGLVEQG-QRYYNMMKN-VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
L G+ +G Q + ++KN + K P + S+++L + G +++A +
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN---SLINLYLKCGNVRKARILFDKT 255
Query: 577 PLEPDVVAWGSLLSA 591
++ VV W S++S
Sbjct: 256 EVKS-VVTWNSMISG 269
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 301/781 (38%), Positives = 441/781 (56%), Gaps = 63/781 (8%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP-- 75
H+L++ + + G H I G +VF+ N+L+ Y++ S+ A +FDE+
Sbjct: 160 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 219
Query: 76 -VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+ + SWN+I+SA+ K A ++F+ M T+IV + I
Sbjct: 220 GIDDVISWNSIVSAHVKSSNAWTALDLFSKM---------TLIVHEKPTNERSDII---- 266
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
++ ++L +C +L + K+VH ++ G V V N+L++ YAK G
Sbjct: 267 ------------SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCG 314
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
A VF+ M K+V SWN +V+ + SG + A F M I DVVTW ++IA
Sbjct: 315 LMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIA 374
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GYSQ G EAL +F M+ SL P+ T+ S LSACA+L G +IHAY ++
Sbjct: 375 GYSQRGCSHEALNLFRQMIFSGSL-PNCVTIISVLSACASLGAFSQGTEIHAYSLK---- 429
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
N L++ GG + +++ + L+D Y K AR IFD
Sbjct: 430 ------NCLLTLDNDFGGED-------------EDLMVYNALIDMYSKCRSFKAARSIFD 470
Query: 371 S--LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSSLA 426
L +R+VV WT M+ G+ Q G + DA++LF M+ E G PN YT+S +L + LA
Sbjct: 471 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 530
Query: 427 SLDHGKQIHASALRSG--EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++ GKQIHA LR E+S+ V+N LI MYSK G+++ AR VF+ + ++ +SWTS
Sbjct: 531 AIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTS 589
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
M+ HG G EA+ +F++M + G PD IT++ VL AC+H G+V+QG Y++ M +
Sbjct: 590 MMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADY 649
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+A +DLL R+G L +A+ +++MP+EP V W +LLSACRVH N++L + A
Sbjct: 650 GLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHA 709
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
KL+ + +N G+Y+ + N+Y++ G+W+D A IR MK G+KK G SWVQ Q
Sbjct: 710 LNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS 769
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V D HP IY + + D IK MG+VP+T LHDV+E+ K +L HSEKLA+A
Sbjct: 770 FFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALA 829
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+GL++T +RI KNLRVC DCHSA +I K+VD EIVVRD +RFHHFK G CSC Y
Sbjct: 830 YGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 889
Query: 785 W 785
W
Sbjct: 890 W 890
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 256/537 (47%), Gaps = 60/537 (11%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++++Y G D A V + +V W +I + + GR +AI + M++ P
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT+ VL +C L G H + G V + N+L+ MY++ G A +FD
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 205 GMR---LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+ + +V SWN +VS H+ S W A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSN-----------------AWT--------------A 243
Query: 262 LGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
L +F+ M K ++ + D ++ + L AC +L+ + K++H IR VG
Sbjct: 244 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 303
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR- 375
NALI YAK G +E A K+ + + +V+++ ++ GY + G+ A +F ++R
Sbjct: 304 NALIDAYAKCGLMENAVKVFNM--MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 361
Query: 376 ---DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
DVV WTA++ GY Q G + +A+ LFR M+ G PN T+ ++LS +SL + G
Sbjct: 362 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 421
Query: 433 QIHASALRS----------GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE-TVS 481
+IHA +L++ GE L V NALI MYSK + AAR +F+ I + V+
Sbjct: 422 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 481
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
WT MI AQ+G +A++LF M+ G+ P+ T +L AC H + G++ +
Sbjct: 482 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 541
Query: 540 MKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ H+ + + A+ ++D+ + G + A + ++M + ++W S+++ +H
Sbjct: 542 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 597
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 25/313 (7%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T ++ Y+ G A + + + V W ++ + + G A+ + M+R G +
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P+++TL +L L S G H +G S++ + NAL+ MYS+ G++ A +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 470 FNLIHWR--QETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKP-----DHITYVGVL 521
F+ I R + +SW S++ A + A+ LF +M L + KP D I+ V +L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 522 TACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPL 578
AC V Q + + N ++N P F +++D + GL++ A M
Sbjct: 273 PACGSLKAVPQTKEVHGNAIRN----GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328
Query: 579 EPDVVAWGSLLSACRVHKNLD-----LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
+ DVV+W ++++ N + + E + P + ++A+ YS G
Sbjct: 329 K-DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI----PLDVVTWTAVIAGYSQRGCSH 383
Query: 634 DAANIRKSMKYVG 646
+A N+ + M + G
Sbjct: 384 EALNLFRQMIFSG 396
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 301/781 (38%), Positives = 441/781 (56%), Gaps = 63/781 (8%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP-- 75
H+L++ + + G H I G +VF+ N+L+ Y++ S+ A +FDE+
Sbjct: 167 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 226
Query: 76 -VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+ + SWN+I+SA+ K A ++F+ M T+IV + I
Sbjct: 227 GIDDVISWNSIVSAHVKSSNAWTALDLFSKM---------TLIVHEKPTNERSDII---- 273
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
++ ++L +C +L + K+VH ++ G V V N+L++ YAK G
Sbjct: 274 ------------SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCG 321
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
A VF+ M K+V SWN +V+ + SG + A F M I DVVTW ++IA
Sbjct: 322 LMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIA 381
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GYSQ G EAL +F M+ SL P+ T+ S LSACA+L G +IHAY ++
Sbjct: 382 GYSQRGCSHEALNLFRQMIFSGSL-PNCVTIISVLSACASLGAFSQGTEIHAYSLK---- 436
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
N L++ GG + +++ + L+D Y K AR IFD
Sbjct: 437 ------NCLLTLDNDFGGED-------------EDLMVYNALIDMYSKCRSFKAARSIFD 477
Query: 371 S--LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSSLA 426
L +R+VV WT M+ G+ Q G + DA++LF M+ E G PN YT+S +L + LA
Sbjct: 478 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 537
Query: 427 SLDHGKQIHASALRSG--EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++ GKQIHA LR E+S+ V+N LI MYSK G+++ AR VF+ + ++ +SWTS
Sbjct: 538 AIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTS 596
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
M+ HG G EA+ +F++M + G PD IT++ VL AC+H G+V+QG Y++ M +
Sbjct: 597 MMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADY 656
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+A +DLL R+G L +A+ +++MP+EP V W +LLSACRVH N++L + A
Sbjct: 657 GLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHA 716
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
KL+ + +N G+Y+ + N+Y++ G+W+D A IR MK G+KK G SWVQ Q
Sbjct: 717 LNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS 776
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V D HP IY + + D IK MG+VP+T LHDV+E+ K +L HSEKLA+A
Sbjct: 777 FFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALA 836
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+GL++T +RI KNLRVC DCHSA +I K+VD EIVVRD +RFHHFK G CSC Y
Sbjct: 837 YGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 896
Query: 785 W 785
W
Sbjct: 897 W 897
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 256/537 (47%), Gaps = 60/537 (11%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++++Y G D A V + +V W +I + + GR +AI + M++ P
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT+ VL +C L G H + G V + N+L+ MY++ G A +FD
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 205 GMR---LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+ + +V SWN +VS H+ S W A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSN-----------------AWT--------------A 250
Query: 262 LGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
L +F+ M K ++ + D ++ + L AC +L+ + K++H IR VG
Sbjct: 251 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 310
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR- 375
NALI YAK G +E A K+ + + +V+++ ++ GY + G+ A +F ++R
Sbjct: 311 NALIDAYAKCGLMENAVKVFNM--MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 368
Query: 376 ---DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
DVV WTA++ GY Q G + +A+ LFR M+ G PN T+ ++LS +SL + G
Sbjct: 369 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 428
Query: 433 QIHASALRS----------GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE-TVS 481
+IHA +L++ GE L V NALI MYSK + AAR +F+ I + V+
Sbjct: 429 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 488
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
WT MI AQ+G +A++LF M+ G+ P+ T +L AC H + G++ +
Sbjct: 489 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 548
Query: 540 MKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ H+ + + A+ ++D+ + G + A + ++M + ++W S+++ +H
Sbjct: 549 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 604
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 25/313 (7%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T ++ Y+ G A + + + V W ++ + + G A+ + M+R G +
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P+++TL +L L S G H +G S++ + NAL+ MYS+ G++ A +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 470 FNLIHWR--QETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKP-----DHITYVGVL 521
F+ I R + +SW S++ A + A+ LF +M L + KP D I+ V +L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 522 TACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPL 578
AC V Q + + N ++N P F +++D + GL++ A M
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRN----GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335
Query: 579 EPDVVAWGSLLSACRVHKNLD-----LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
+ DVV+W ++++ N + + E + P + ++A+ YS G
Sbjct: 336 K-DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI----PLDVVTWTAVIAGYSQRGCSH 390
Query: 634 DAANIRKSMKYVG 646
+A N+ + M + G
Sbjct: 391 EALNLFRQMIFSG 403
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/776 (35%), Positives = 432/776 (55%), Gaps = 96/776 (12%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+S + AHL+Q+ +++ GK +HA +I+ G + FL N +N Y+K
Sbjct: 72 LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKC-------- 123
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
G LD ++F+ M R+ VSWT+II + RF+ A
Sbjct: 124 -----------------------GELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEA 160
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ F +M + + TQF ++SVL +CT+LG + G +VH VVK G + V ++L +M
Sbjct: 161 LSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDM 220
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y+K G+ L A F++M +D V W SMI
Sbjct: 221 YSKCGE-------------------------------LSDACKAFEEMPCKDAVLWTSMI 249
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
G+ +NG +AL + M+ D D+ L STLSAC+ L+ GK +HA I++ F
Sbjct: 250 DGFVKNGDFKKALTAYMKMVTDDVF-IDQHVLCSTLSACSALKASSFGKSLHATILKLGF 308
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+ +GNAL Y+K G + A + Q +++++ T ++DGY+++ I A F
Sbjct: 309 EYETFIGNALTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTF 367
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
LR R G +PN +T ++++ ++ A L+
Sbjct: 368 VDLR-------------------------------RRGIEPNEFTFTSLIKACANQAKLE 396
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
HG Q+H ++ VS+ L+ MY K G + + ++F+ I E ++W +++
Sbjct: 397 HGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDE-IAWNTLVGVF 455
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
+QHGLG AI+ F M+ G+KP+ +T+V +L C+H G+VE G Y++ M+ ++ + P
Sbjct: 456 SQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPK 515
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H++ ++DLLGRAG L+EA +FI NMP EP+V W S L AC++H +++ K AA+KL+
Sbjct: 516 EEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLM 575
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP+NSGA+ L N+Y+ +WED ++RK +K + K G+SWV I+NK HVFGVED
Sbjct: 576 KLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVED 635
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
W HPQ+ IY K+ + D+IK +G+VP T SVL D+++++KE++L +HSE++A+AF L++
Sbjct: 636 WSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLT 695
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
P + + KNLRVC+DCHSA+KFI K+ +R I+VRD +RFHHF G CSC DYW
Sbjct: 696 CPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 293/837 (35%), Positives = 450/837 (53%), Gaps = 137/837 (16%)
Query: 20 LQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
L S+ KS + G+ +H +K L V + N ++N YAK SI A++VFD+M K+
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS 309
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLM------PNR-------------DSVSW------ 113
+ SW I+ YA G ++A E+F M PNR ++ W
Sbjct: 310 VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHS 369
Query: 114 --------------TTIIVTYNEIGRFKNAIRMFVEMV---------------------- 137
T ++ Y + G +K+ ++F ++V
Sbjct: 370 HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEE 429
Query: 138 ---------QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
++ ++P + T +L +C L G+++HS VVK G ++V N+L++
Sbjct: 430 ASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALIS 489
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYA+ G A+ +F+ M + +D+++W +M
Sbjct: 490 MYARCGSIKDARLLFNKM-------------------------------VRKDIISWTAM 518
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I G +++G EAL +F +M + + LKP++ T S L+AC++ L G++IH +I
Sbjct: 519 IGGLAKSGLGAEALAVFQDM-QQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAG 577
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
V N L++ Y+ G V+ A+++
Sbjct: 578 LATDAHVANTLVNMYSMCGSVKDARQV--------------------------------- 604
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
FD + RD+VA+ AM+ GY + L K+A++LF + EG KP+ T ML+ ++ SL
Sbjct: 605 FDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ K+IH+ L+ G S S+ NAL++ Y+K G+ + A VF+ + ++ +SW ++I
Sbjct: 665 EWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGG 723
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQHG G++ +QLFERM GIKPD +T+V +L+AC+H GL+E+G+RY+ M I P
Sbjct: 724 CAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITP 783
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
T H+ MVDLLGRAG L E I+ MP + + WG+LL ACR+H N+ + + AAE
Sbjct: 784 TIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESS 843
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L ++PDN+ Y AL ++Y++ G W+ AA +RK M+ GV K G SW+++ +K+H F E
Sbjct: 844 LKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAE 903
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D HP+ + IY ++ K+ +K G+VPDT SV+HDV+E KE + HHSE+LAIA+GLI
Sbjct: 904 DRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLI 963
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ST T +RI KNLRVC DCH+A KFI K+VDREIV RD RFHHFK G+CSC DYW
Sbjct: 964 STLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/590 (27%), Positives = 282/590 (47%), Gaps = 102/590 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L+ ++ ++ G+ VH II+ L + N+L+N Y + SI A++V
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQV----- 198
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
WN + R SW ++V Y + G + A+++ E
Sbjct: 199 ------WNKLNHT------------------ERTVHSWNAMVVGYVQYGYIEEALKLLRE 234
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M Q + + T +L+SC + L G+++H +K L VNV N +LNMYAK G
Sbjct: 235 MQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGS 294
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD M K+V SW ++ I GY+
Sbjct: 295 IHEAREVFDKMETKSVVSWTII-------------------------------IGGYADC 323
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G+ A +F M ++ + P++ T + L+A + LK GK +H++I+ ++ V
Sbjct: 324 GHSEIAFEIFQKMQQEGVV-PNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAV 382
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G AL+ YAK G SY + R++F+ L +R
Sbjct: 383 GTALVKMYAKCG--------------SYKD-------------------CRQVFEKLVNR 409
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D++AW M+ G + G ++A E++ M REG PN T +L+ + +L G++IH
Sbjct: 410 DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH 469
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ ++ G +SV NALI+MY++ G+I AR +FN + R++ +SWT+MI LA+ GLG
Sbjct: 470 SRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGGLAKSGLG 528
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA- 554
EA+ +F+ M + G+KP+ +TY +L AC+ ++ G+R + + + T +H A
Sbjct: 529 AEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV--IEAGLATDAHVAN 586
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
++V++ G +++A + M + D+VA+ +++ H +LGK A
Sbjct: 587 TLVNMYSMCGSVKDARQVFDRMT-QRDIVAYNAMIGGYAAH---NLGKEA 632
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 35/278 (12%)
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
A+++ + + ++G + N+ ML + L G+++H ++ NALI
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 456 MYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY + G+I AR+V+N ++ + TV SW +M+V Q+G EEA++L M + G+
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 515 ITYVGVLTACTHGGLVEQGQRYY-------------------NMMKNVHKIKPTPSHFAS 555
T + +L++C +E G+ + NM I F
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 556 M-----------VDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLG 601
M + G + A+ + M E P+ + + ++L+A L G
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 602 KIAAEKLLLIEPDNSGAY-SALCNLYSSCGKWEDAANI 638
K +L ++ A +AL +Y+ CG ++D +
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y ++L + S + K +H+ ++K G L N+L++ YAK S S A VFD+M
Sbjct: 651 YINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMM 710
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTIIVTYNEIGRFKNAIR 131
+ + SWN I+ A+ GR ++F M D V++ +++ + G + R
Sbjct: 711 KRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRR 770
Query: 132 MFVEMVQD-QVLPT 144
F M +D + PT
Sbjct: 771 YFCSMSRDFGITPT 784
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 273/697 (39%), Positives = 421/697 (60%), Gaps = 66/697 (9%)
Query: 92 QGRLDL--ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+GR DL A +VF MP R++V+WT +I + G AI +F++M+ P +FT++
Sbjct: 216 KGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLS 275
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
V+++C + L G+++HS ++ GL+ V L+NMYAK +
Sbjct: 276 GVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD------------- 322
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEALGMFANM 268
G + AR FDQ+++ +V +W +MI GY Q GYD EAL +F M
Sbjct: 323 ---------------GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + + P+ FT +STL ACANL L++G+Q+ + ++ F + V N+LIS YA+
Sbjct: 368 IL-THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS-- 424
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
G I AR+ FD L +++++++ ++ Y
Sbjct: 425 -------------------------------GRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+N +++A+ELF + +G + +T +++LS ++S+ ++ G+QIHA ++SG + S
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V NALI+MYS+ GNI +A +VF + R +SWTS+I A+HG +A++LF +MLE
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRN-VISWTSIITGFAKHGFATQALELFHKMLEE 572
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G++P+ +TY+ VL+AC+H GLV +G +++ M H + P H+A +VD+LGR+G L E
Sbjct: 573 GVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSE 632
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI +MP + D + W + L ACRVH NL+LGK AA+ ++ EP + AY L NLY+S
Sbjct: 633 AIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAS 692
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
KW++ +NIRK+MK + K G SWV+++NKVH F V D HP+ IY+++ + +
Sbjct: 693 ISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVK 752
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IK++G+VP+ VLHDVEE+ KE++L HSEK+A+AFGLIST + +R+ KNLR+C DC
Sbjct: 753 IKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDC 812
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HSAIK+I REI+VRDA RFHH K G CSC +YW
Sbjct: 813 HSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 160/592 (27%), Positives = 293/592 (49%), Gaps = 110/592 (18%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L+ Y+ L+ +++R+ +G LVH ++ + L L NSL
Sbjct: 66 LQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSL------------------ 107
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM-PNRDSVSWTTIIVTYNEIGRFKNAIR 131
+S Y+K G+ + A +F LM +RD +SW+ ++ + A+
Sbjct: 108 -------------ISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMY 190
FV+M+++ P ++ + +C+ +S G + FV+KTG L V V L++M+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMF 214
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA--QFDQMIERDVVTWNSM 248
K GR DL A F++M ER+ VTW M
Sbjct: 215 VK--------------------------------GRGDLVSAFKVFEKMPERNAVTWTLM 242
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I Q GY EA+ +F +M+ S +PD+FTL+ +SACAN+E L LG+Q+H+ IR
Sbjct: 243 ITRLMQFGYAGEAIDLFLDMIF-SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301
Query: 309 FDATGPVGNALISCYAKV---GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
VG LI+ YAK G + A+KI +Q +LD
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ-------------ILD----------- 337
Query: 366 RRIFDSLRDRDVVAWTAMLVGY-EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
+V +WTAM+ GY ++ G +++A++LFR M+ PN++T S+ L ++
Sbjct: 338 ---------HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACAN 388
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
LA+L G+Q+ A++ G +S V+N+LI+MY+++G I+ AR+ F+++ + + +S+ +
Sbjct: 389 LAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL-FEKNLISYNT 447
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNV 543
+I A A++ EEA++LF + + G+ T+ +L+ G + +G++ + ++K+
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSG 507
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
K+ + + +++ + R G ++ A+ E+M + +V++W S+++ H
Sbjct: 508 LKLNQSVCN--ALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/579 (24%), Positives = 240/579 (41%), Gaps = 118/579 (20%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR AI MV P T + L C G VH + ++ L
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
NSL+++Y+K G A ++F RL S RD++
Sbjct: 105 NSLISLYSKCGQWEKATSIF---RLMGSS---------------------------RDLI 134
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W++M++ ++ N F AL F +M+++ P+++ A+ AC+ E + +G I +
Sbjct: 135 SWSAMVSCFANNNMGFRALLTFVDMIENG-YYPNEYCFAAATRACSTAEFVSVGDSIFGF 193
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK-IGDI 362
+I+T + + + + C L+D ++K GD+
Sbjct: 194 VIKTGYLQS----DVCVGC----------------------------GLIDMFVKGRGDL 221
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A ++F+ + +R+ V WT M+ Q G +A++LF M+ G +P+ +TLS ++S
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRVFNLIHWRQET 479
+++ L G+Q+H+ A+R G V LI MY+K G++ AAR++F+ I
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI-LDHNV 340
Query: 480 VSWTSMIVALAQH-GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
SWT+MI Q G EEA+ LF M+ + P+H T+ L AC + + G++ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF- 399
Query: 539 MMKNVHKIKPTPSHF----ASMVDLLGRAGLLQEA------------------------- 569
H +K S S++ + R+G + +A
Sbjct: 400 ----THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKN 455
Query: 570 ---------YNFIENMPLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAY 619
+N IE+ + + SLLS + G +I A + N
Sbjct: 456 LNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVC 515
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+AL ++YS CG E A + + M+ V SW I
Sbjct: 516 NALISMYSRCGNIESAFQVFEDMEDRNV-----ISWTSI 549
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 216/480 (45%), Gaps = 104/480 (21%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE---SISYAKKVFDEMPVKTLCSWNTIL 86
+G+ +H++ I+ GL L + L+N YAK S+ A+K+FD++
Sbjct: 288 LLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI------------ 335
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF-KNAIRMFVEMVQDQVLPTQ 145
LD + SWT +I Y + G + + A+ +F M+ V+P
Sbjct: 336 --------LD-----------HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNH 376
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT +S L +C L L G++V + VK G S V NSL++MYA+ G A+ FD
Sbjct: 377 FTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDI 436
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+ E++++++N++I Y++N EAL +F
Sbjct: 437 L-------------------------------FEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
N ++D + FT AS LS A++ + G+QIHA +I++ V NALIS Y++
Sbjct: 466 -NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSR 524
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A ++ E + NVI++T+++ G+ K
Sbjct: 525 CGNIESAFQVFED--MEDRNVISWTSIITGFAK--------------------------- 555
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEA 444
+G A+ELF M+ EG +PN T A+LS S + ++ G K + G
Sbjct: 556 ----HGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQL 501
+ ++ + ++G+++ A + N + ++ + + W + + A HG LG+ A ++
Sbjct: 612 PRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 4/212 (1%)
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
T L+ NG A+ MV +G P+ T S L S D G +H +
Sbjct: 35 TGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQ 94
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
S N+LI++YSK G A +F L+ ++ +SW++M+ A + +G A+
Sbjct: 95 SDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
F M+E G P+ + AC+ V G + + ++ ++D+
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMF 214
Query: 561 --GRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
GR G L A+ E MP E + V W +++
Sbjct: 215 VKGR-GDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 291/786 (37%), Positives = 441/786 (56%), Gaps = 84/786 (10%)
Query: 14 EF-YAHLLQSNLKSRNPFVGKLVH-----ARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
EF ++ +L+ +RN +GK +H +I G+ + F ++++N A E +Y
Sbjct: 148 EFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYG 207
Query: 68 KKV--------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
KV +D P S N +L YAK G + A VF +P D VSW +I
Sbjct: 208 MKVHGYLIKLGYDSDPF----SANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAG 263
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
+ A+++ +M +V P+ FT++S L +C A+G + G+++HS ++K +
Sbjct: 264 CVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPD 323
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V L++MY+K G L AR FD M
Sbjct: 324 SFVGVGLIDMYSKCG-------------------------------LLQDARMVFDLMPX 352
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
+DV+ WNS+I+GYS GYD EA+ +F NM K+ L+ ++ TL++ L + A + +Q
Sbjct: 353 KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEG-LEFNQTTLSTILKSTAGSQANGFCEQ 411
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H I++ + G V N +LLD Y K
Sbjct: 412 VHTISIKSGYQYDGYVAN---------------------------------SLLDSYGKC 438
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
+ A ++F+ D+VA+T+M+ Y Q GL ++A++++ M KP+ + S++
Sbjct: 439 CLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLF 498
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
+ ++L++ + GKQIH L+ G S + N+L+ MY+K G+I+ A +FN I WR
Sbjct: 499 NACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRG-I 557
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSW++MI LAQHG G +A+QLF +ML+ GI P+HIT V VL+AC H GLV + +R++ +
Sbjct: 558 VSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGL 617
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M+ + I PT H+A MVD+LGR G L EA ++ MP + WG+LL A R+HKN++
Sbjct: 618 MEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIE 677
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ AAE LL +EP+ SG + L N+Y+S G W++ A +R+SMK VKK G SW++++
Sbjct: 678 LGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELK 737
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+KV+ F V D HP+ IY K+ + + + G+VP + LHDVE+ KEQ+L HHSE
Sbjct: 738 DKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSE 797
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLA+AFGLI+TP +R+ KNLRVC DCH+A KFI K+ REI+VRD RFHHF+ G C
Sbjct: 798 KLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSC 857
Query: 780 SCRDYW 785
SC DYW
Sbjct: 858 SCGDYW 863
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/591 (26%), Positives = 283/591 (47%), Gaps = 84/591 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL S++ G +HARII+ + L+N L+N Y+K + A+K+ +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIR---LGLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 76 VKTLCSWNTILSAYAKQGRLDLAC----EVFNLMPNRDSVSWTTII----VTYN-EIGRF 126
L SW+ ++S Y + GR + A E++ L + ++++++ +T N E+G+
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+ + + EM+ + P +F++++VL +C L D + G KVH +++K G N+L
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
L+MYAK G A AVF + ++ SWN V++ + + DLA +M V
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVA--- 286
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
P FTL+S L ACA + +KLG+Q+H+ +++
Sbjct: 287 -----------------------------PSMFTLSSALKACAAIGLVKLGRQLHSALMK 317
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ + VG LI Y+K G ++ AR
Sbjct: 318 MDMEPDSFVGVGLIDMYSKCGLLQ---------------------------------DAR 344
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+FD + +DV+ W +++ GY G + +A+ LF +M +EG + N TLS +L ++
Sbjct: 345 MVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQ 404
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ +Q+H +++SG V+N+L+ Y K + A +VF + ++ V++TSMI
Sbjct: 405 ANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCP-AEDLVAYTSMI 463
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A +Q+GLGEEA++++ RM + IKPD + + AC + EQG++ + +V K
Sbjct: 464 TAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIH---VHVLKC 520
Query: 547 KPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
FA S+V++ + G + +A + +V+W +++ H
Sbjct: 521 GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLAQH 570
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 249/542 (45%), Gaps = 85/542 (15%)
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L TA D+S+G +H+ +++ GL + N L+N+Y+K +A+ + +
Sbjct: 56 LLLQFTASKDVSSGMAIHARIIRLGLL---GLRNRLVNLYSKCQCFRVARKLVIDSSEPD 112
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYS-----QNGYDFEA 261
+ SW+ ++S ++ +GR + A + +M + + T++S++ G S + G
Sbjct: 113 LVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHR 172
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ + M+ + + P++F+L++ L+ACA LE G ++H Y+I+ +D+ NAL+
Sbjct: 173 VALVTEMI-STGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLD 231
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G E A IA +F + D+V+W
Sbjct: 232 MYAKSGCPEAA--------------IA-------------------VFYEIPKPDIVSWN 258
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
A++ G + N A++L M P+ +TLS+ L +++ + G+Q+H++ ++
Sbjct: 259 AVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKM 318
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
V LI MYSK G + AR VF+L+ ++ + W S+I + G EA+ L
Sbjct: 319 DMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP-XKDVIVWNSIISGYSNCGYDIEAMSL 377
Query: 502 FERMLELGIKPDHITYVGVL--TACTHG-GLVEQ--------GQRYYNMMKN-------- 542
F M + G++ + T +L TA + G EQ G +Y + N
Sbjct: 378 FTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGK 437
Query: 543 ---------VHKIKPTPS--HFASMVDLLGRAGLLQEA---YNFIENMPLEPDVVAWGSL 588
V ++ P + SM+ + GL +EA Y +++ ++PD + SL
Sbjct: 438 CCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSL 497
Query: 589 LSACRVHKNLDLGK---IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
+AC + GK + K L+ +G ++L N+Y+ CG +DA+ I + +
Sbjct: 498 FNACANLSAYEQGKQIHVHVLKCGLLSDVFAG--NSLVNMYAKCGSIDDASCIFNEISWR 555
Query: 646 GV 647
G+
Sbjct: 556 GI 557
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 69/281 (24%)
Query: 13 LEFYAHLLQSNLKSR-----NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
LEF L + LKS N F + VH IK G ++ NSL++ Y K + A
Sbjct: 386 LEFNQTTLSTILKSTAGSQANGFCEQ-VHTISIKSGYQYDGYVANSLLDSYGKCCLLEDA 444
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
KVF+ P + L ++ ++++AY++ G +G +
Sbjct: 445 AKVFEVCPAEDLVAYTSMITAYSQYG-----------------------------LG--E 473
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A++M++ M + P F +S+ +C L GK++H V+K GL V NSL+
Sbjct: 474 EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
NMYAK G +D A F+++ R +V+W++
Sbjct: 534 NMYAKCGS-------------------------------IDDASCIFNEISWRGIVSWSA 562
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
MI G +Q+G+ +AL +F MLK+ L P+ TL S LSAC
Sbjct: 563 MIGGLAQHGHGRKALQLFYQMLKNGIL-PNHITLVSVLSAC 602
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 272/661 (41%), Positives = 398/661 (60%), Gaps = 38/661 (5%)
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
R K A+++ ++ + P+ ++++ SC L GKKVH + +G + + N
Sbjct: 54 RLKEALQILHQIDK----PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILN 109
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
LL MYAK M ++ +FD M +++ SWN+++S + G L A++ FD+M ERD +
Sbjct: 110 RLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFS 169
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W +MI+GY ++ EAL +F M + + K +KFT++S L+A A + L++GK+IH YI
Sbjct: 170 WTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYI 229
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+RT D+ + + ++ L D Y K G I
Sbjct: 230 MRTGLDS---------------------------------DEVVWSALSDMYGKCGSIEE 256
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
AR IFD + DRD+V WTAM+ Y Q+G K+ +LF ++R G +PN +T S +L+ ++
Sbjct: 257 ARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACAN 316
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
S + GK++H R G ++AL+ MYSK GN+ +A RVF + + SWTS
Sbjct: 317 QTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETP-QPDLFSWTS 375
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
+I AQ+G +EAI+ FE +++ G +PDHIT+VGVL+AC H GLV++G Y++ +K +
Sbjct: 376 LIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQY 435
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ T H+A ++DLL R+G EA N I M ++PD W SLL CR+H NL L + A
Sbjct: 436 GLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRA 495
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AE L IEP+N Y L N+Y++ G W + A IRK+M GV K G SW+ I+ VHV
Sbjct: 496 AEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHV 555
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V D HP+ I + K+ +KE GFVPDT VLHDVE++ KEQ L +HSEKLA+A
Sbjct: 556 FLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVA 615
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
FG+ISTPE T +++ KNLR C DCH+AIKFI K+ +R+I+VRD+ RFH F+ G CSCRDY
Sbjct: 616 FGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDY 675
Query: 785 W 785
W
Sbjct: 676 W 676
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 251/517 (48%), Gaps = 70/517 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ L+QS +KSR GK VH I G +F+ N L+ YAK +S+ ++K+FDEMP
Sbjct: 73 YSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMP 132
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ LCSWN ++S YAK G L A +F+ MP RD+ SWT +I Y R A+ +F
Sbjct: 133 ERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRM 192
Query: 136 MVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M + D +FTV+S LA+ A+ L GK++H ++++TGL V ++L +MY K G
Sbjct: 193 MKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCG 252
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ +FD M +++ +W +MI Y Q
Sbjct: 253 SIEEARHIFDKMVDRDIVTW-------------------------------TAMIDRYFQ 281
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G E +FA++L+ S ++P++FT + L+ACAN +LGK++H Y+ R FD
Sbjct: 282 DGRRKEGFDLFADLLR-SGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSF 340
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+AL+ Y+K G + A+++ +++ ++ ++T+L+ GY
Sbjct: 341 AASALVHMYSKCGNMVSAERVFKET--PQPDLFSWTSLIAGYA----------------- 381
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQ 433
QNG +A+ F +V+ G +P++ T +LS + +D G
Sbjct: 382 --------------QNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDY 427
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
H+ + G + +I + +++G + A + + + + + W S++ HG
Sbjct: 428 FHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487
Query: 494 LGEEAIQLFERMLELGIKPDH-ITYVGVLTACTHGGL 529
+ A + E + E I+P++ TYV + G+
Sbjct: 488 NLKLAQRAAEALFE--IEPENPATYVTLANIYATAGM 522
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 283/771 (36%), Positives = 429/771 (55%), Gaps = 100/771 (12%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
AH++Q+ K++ GK +HA +I G FL N L+N Y+K
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC--------------- 53
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
G LD A ++F+ MP R+ VSWT +I ++ +F AIR F M
Sbjct: 54 ----------------GELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGM 97
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+PTQF +S + +C +LG + GK++H +K G+ + V ++L +MY+K G
Sbjct: 98 RICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCG-- 155
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A+FD ++ F++M +D V+W +MI GYS+ G
Sbjct: 156 ----AMFDACKV-------------------------FEEMPCKDEVSWTAMIDGYSKIG 186
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
EAL F M+ D + D+ L STL AC L+ K G+ +H+ +++ F++ VG
Sbjct: 187 EFEEALLAFKKMI-DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF--DSLRD 374
NAL D Y K GD+ A +F DS
Sbjct: 246 NALT---------------------------------DMYSKAGDMESASNVFGIDS-EC 271
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
R+VV++T ++ GY + + + +F + R+G +PN +T S+++ ++ A+L+ G Q+
Sbjct: 272 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 331
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA ++ VS+ L+ MY K G + A + F+ I E ++W S++ QHGL
Sbjct: 332 HAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVFGQHGL 390
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G++AI++FERM++ G+KP+ IT++ +LT C+H GLVE+G Y+ M + + P H++
Sbjct: 391 GKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYS 450
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
++DLLGRAG L+EA FI MP EP+ W S L ACR+H + ++GK+AAEKL+ +EP
Sbjct: 451 CVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK 510
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
NSGA L N+Y++ +WED ++R M+ VKK G+SWV + K HVFG EDW HP+
Sbjct: 511 NSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPR 570
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+ AIY K+ + D+IK G+VP T SV D+++ +KE++L HSE++A+AF LIS P
Sbjct: 571 KSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGK 630
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + KNLRVC DCHSAIKFI K+ R+I+VRD +RFHHF G CSC DYW
Sbjct: 631 PIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 81/406 (19%)
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML+D++ LA + A ++L+ GKQ+HA +I + + N L++ Y+K
Sbjct: 1 MLRDTN------ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC- 53
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
G++ A ++FD++ R++V+WTAM+ G
Sbjct: 54 --------------------------------GELDHALKLFDTMPQRNLVSWTAMISGL 81
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QN +A+ F M G P + S+ + +SL S++ GKQ+H AL+ G S L
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V + L MYSK G + A +VF + + E VSWT+MI ++ G EEA+ F++M++
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDE-VSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGL 565
+ D L AC G ++ + ++ +V K+ F ++ D+ +AG
Sbjct: 201 EEVTIDQHVLCSTLGAC---GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGD 257
Query: 566 LQEAYN---------------------------------FIE--NMPLEPDVVAWGSLLS 590
++ A N F+E +EP+ + SL+
Sbjct: 258 MESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 317
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA-LCNLYSSCGKWEDA 635
AC L+ G +++ I D S+ L ++Y CG E A
Sbjct: 318 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 363
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV----- 70
Y L+ +++ G V + + G+ + F +SL+ A ++ ++
Sbjct: 277 YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVM 336
Query: 71 ---FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
FDE P + + ++ Y K G L+ A + F+ + + ++W +++ + + G K
Sbjct: 337 KINFDEDPFVS----SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGK 392
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
+AI++F MV V P T S+L C+ G + G
Sbjct: 393 DAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 268/701 (38%), Positives = 415/701 (59%), Gaps = 67/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+++ YAK ++D A ++F+ MP RD VSW TII +++ G K A+ + + M + P
Sbjct: 188 VVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPD 247
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T+ +VL + +G L GK +H + ++ G + VN++ +L +MY+K G
Sbjct: 248 SITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS--------- 298
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
++ AR FD M ++ VV+WNSM+ GY QNG +A+ +
Sbjct: 299 ----------------------VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAV 336
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F ML++ + P T+ L ACA+L L+ GK +H ++ + + V N+LIS Y+
Sbjct: 337 FEKMLEEG-IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K V+IA I F++L R V+W AM+
Sbjct: 396 KCKRVDIASDI---------------------------------FNNLNGRTHVSWNAMI 422
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
+GY QNG +A+ F M G KP+++T+ +++ + L+ H K IH +RS
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
++ V+ AL+ MYSK G I+ AR++F++I R ++W +MI HGLG A+ LF++
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRH-VITWNAMIDGYGTHGLGRAALDLFDK 541
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + ++P+ ITY+ V++AC+H GLV++G R++ MK + ++P+ H+ +MVDLLGRAG
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAG 601
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++EA++FIENMP+ P + +G++L AC++HKN+++G+ AA+KL + PD G + L N
Sbjct: 602 RIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLAN 661
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+S KW A +RK+M+ G+KKT G S V+++N+VH F HPQ IY + +
Sbjct: 662 IYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEE 721
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ EIK G+VPDT +L DVE+DV+EQ+L HSEKLAIAFGL++T TT+ + KNLRV
Sbjct: 722 LVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+A K+I + REI+VRD RFHHFK G+CSC DYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/645 (25%), Positives = 273/645 (42%), Gaps = 144/645 (22%)
Query: 39 IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLA 98
+IK GL+ + L++ ++K SI+ A +VF+ + K ++T+L YAK L+
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLE-- 129
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
A+ M D V P + T +L C
Sbjct: 130 -----------------------------TALAFLCRMRYDDVKPVVYNFTYLLKVCGDN 160
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
DL GK++H ++ + V ++NMYAK A +FD M +++ SWN +
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTI- 219
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
IAG+SQNG+ +AL + M +D +PD
Sbjct: 220 ------------------------------IAGFSQNGFAKKALELVLRM-QDEGQRPDS 248
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
TL + L A A++ L +GK IH Y IR F + AL Y+K G VE A+ I +
Sbjct: 249 ITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFD- 307
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
G+ V+++ +++DGY+ QNG + A+
Sbjct: 308 -GMDQKTVVSWNSMMDGYV-------------------------------QNGEPEKAIA 335
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
+F M+ EG P T+ L + L L+ GK +H + S +SV N+LI+MYS
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K ++ A +FN ++ R VSW +MI+ AQ+G EA+ F M LG+KPD T V
Sbjct: 396 KCKRVDIASDIFNNLNGRTH-VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMV 454
Query: 519 GVLTACT-----------HG------------------------GLVEQGQRYYNMMKNV 543
V+ A HG G + ++ ++M+ +
Sbjct: 455 SVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR 514
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDL 600
H I + +M+D G GL + A + + M +EP+ + + S++SAC +D
Sbjct: 515 HVIT-----WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDE 569
Query: 601 GK---IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
G + ++ +EP + Y A+ +L G+ ++A + ++M
Sbjct: 570 GLRHFKSMKQDYGLEP-SMDHYGAMVDLLGRAGRIKEAWDFIENM 613
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 205/442 (46%), Gaps = 72/442 (16%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+VSL G ++ A F+ + ++ +++M+ GY++N AL M D +KP
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD-VKP 145
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ L C + LK GK+IH +I F A
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA------------------------- 180
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
NV A T +++ Y K I A ++FD + +RD+V+W ++ G+ QNG K A
Sbjct: 181 --------NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+EL M EG +P++ TL +L ++ + L GK IH A+R+G A +++S AL M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YSK G++ AR +F+ + ++ VSW SM+ Q+G E+AI +FE+MLE GI P +T
Sbjct: 293 YSKCGSVETARLIFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+ L AC G +E+G K VHK F++ +
Sbjct: 352 IMEALHACADLGDLERG-------KFVHK--------------------------FVDQL 378
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
L D+ SL+S K +D IA++ + +++A+ Y+ G+ +A
Sbjct: 379 NLGSDISVMNSLISMYSKCKRVD---IASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435
Query: 637 NIRKSMKYVGVKKTQGFSWVQI 658
N MK +G+ K F+ V +
Sbjct: 436 NCFSEMKSLGM-KPDSFTMVSV 456
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 229/562 (40%), Gaps = 148/562 (26%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++I +VF ++N YAK I A K+FD MP + L SWNTI++ +++
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G K A+ + + M + P T+ +V
Sbjct: 226 NGFA-------------------------------KKALELVLRMQDEGQRPDSITLVTV 254
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + +G L GK +H + ++ G + VN++ +L +MY+K G A+ +FDGM K V
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIER------------------------------- 240
SWN ++ ++ +G + A A F++M+E
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 241 --------DVVTWNSMIAGYS-------------------------------QNGYDFEA 261
D+ NS+I+ YS QNG EA
Sbjct: 375 VDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEA 434
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L F+ M K +KPD FT+ S + A A L + K IH IIR+ D V AL+
Sbjct: 435 LNCFSEM-KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVD 493
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+K G + +A+K+ + IS +VI + ++D
Sbjct: 494 MYSKCGAIHMARKLFDM--ISDRHVITWNAMID--------------------------- 524
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
GY +GL + A++LF M + +PN+ T +++S S +D G + H +++
Sbjct: 525 ----GYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQ 579
Query: 442 --GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGE 496
G S+ A++ + +AG I A + + +M+ A H +GE
Sbjct: 580 DYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGE 639
Query: 497 EAI-QLFERMLELGIKPDHITY 517
+A +LFE + PD Y
Sbjct: 640 KAAKKLFE------LNPDEGGY 655
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+ +L + +S+ L QI +++G + L++++SK G+IN A RVF I
Sbjct: 53 AVLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ + + + +M+ A++ E A+ RM +KP + +L C +++G+
Sbjct: 110 KLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + + +V++ + + +AY + MP E D+V+W ++++
Sbjct: 169 IHGQLI-TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 280/724 (38%), Positives = 428/724 (59%), Gaps = 46/724 (6%)
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR-DSVSWTTIIVTYNEIG 124
+A+ + +P +L S TILS Y+ L + +FN +P+ +++W +II Y G
Sbjct: 28 HAQILRTSLPSPSLLS--TILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHG 85
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
F +++ F++M+ P SVL SCT + DL G+ VH +++ G+ + N
Sbjct: 86 LFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCN 145
Query: 185 SLLNMYAK---VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+L+NMY+K + + K VFD + +V S S ++ S R F+ M +RD
Sbjct: 146 ALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS-----LRKVFEMMPKRD 200
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+WN++I+G +QNG +AL M M ++ L+PD FTL+S L A L GK+IH
Sbjct: 201 IVSWNTVISGNAQNGMHEDALMMVREM-GNADLRPDSFTLSSVLPIFAEYVNLLKGKEIH 259
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y IR +DA +G++LI YAK V+
Sbjct: 260 GYAIRNGYDADVFIGSSLIDMYAKCTRVD------------------------------- 288
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ R+F L D ++W +++ G QNG+ + ++ F+ M+ KPN+ + S+++
Sbjct: 289 --DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 346
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L +L GKQ+H +RS ++ +++AL+ MY+K GNI AR +F+ + + VS
Sbjct: 347 CAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL-YDMVS 405
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
WT+MI+ A HG +AI LF+RM G+KP+++ ++ VLTAC+H GLV++ +Y+N M
Sbjct: 406 WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 465
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
++I P H+A++ DLLGR G L+EAY FI +M +EP W +LL+ACRVHKN++L
Sbjct: 466 QDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELA 525
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
+ ++KL ++P N GAY L N+YS+ G+W+DA +R +M+ G+KK SW++I+NK
Sbjct: 526 EKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNK 585
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
VH F D HP D I + + ++++ G+V DT VLHDVEE+ K +L HSE+L
Sbjct: 586 VHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERL 645
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AI FG+ISTP TT+R+ KNLRVC DCH+A KFI K+V REIVVRD +RFHHFK G CSC
Sbjct: 646 AITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSC 705
Query: 782 RDYW 785
D+W
Sbjct: 706 GDFW 709
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 228/504 (45%), Gaps = 76/504 (15%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK---TESISYAKKVFD 72
+ +L+S ++ G+ VH II+ G+ ++ N+LMN Y+K E ++ KKVFD
Sbjct: 109 FPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFD 168
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
E + S S Y R +VF +MP RD VSW T+I + G ++A+ M
Sbjct: 169 EGKTSDVYSKKEKESYYLGSLR-----KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMM 223
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
EM + P FT++SVL +L GK++H + ++ G V + +SL++MYAK
Sbjct: 224 VREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAK 283
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
R+D + F + + D ++WNS+IAG
Sbjct: 284 C-------------------------------TRVDDSCRVFYMLPQHDGISWNSIIAGC 312
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
QNG E L F ML + +KP+ + +S + ACA+L L LGKQ+H YIIR+ FD
Sbjct: 313 VQNGMFDEGLKFFQQMLI-AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN 371
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+ +AL+ YAK G + AR IFD +
Sbjct: 372 VFIASALVDMYAKCGNIRT---------------------------------ARWIFDKM 398
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
D+V+WTAM++GY +G DA+ LF+ M EG KPN A+L+ S +D
Sbjct: 399 ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAW 458
Query: 433 QIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ S + L A+ + + G + A + +H W++++ A
Sbjct: 459 KYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRV 518
Query: 492 HGLGEEAIQLFERMLELGIKPDHI 515
H E A ++ +++ + P +I
Sbjct: 519 HKNIELAEKVSKKLFT--VDPQNI 540
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN S S + AHL +L GK +H II+ +VF+ ++L++ YAK +
Sbjct: 335 PNHVSFSSIMPACAHLTTLHL-------GKQLHGYIIRSRFDGNVFIASALVDMYAKCGN 387
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM------PNRDSVSWTTII 117
I A+ +FD+M + + SW ++ YA G A +F M PN V++ ++
Sbjct: 388 IRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNY--VAFMAVL 445
Query: 118 VTYNEIGRFKNAIRMFVEMVQD-QVLP 143
+ G A + F M QD +++P
Sbjct: 446 TACSHAGLVDEAWKYFNSMTQDYRIIP 472
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 300/769 (39%), Positives = 438/769 (56%), Gaps = 76/769 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM---PVKTLCSWNTILSA 88
G VHA + G +VF+ N L++ Y + + A++VFDEM V L SWN+I++A
Sbjct: 164 GASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 223
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFT 147
Y + G DS+ A++MF M +D + P +
Sbjct: 224 YMQGG---------------DSI----------------RAMKMFERMTEDLGIRPDAVS 252
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ +VL +C ++G S GK+VH + +++GL V V N++++MYAK G A VF+ M+
Sbjct: 253 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 312
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALG 263
+K+V SWN +V+ + GR D A F+++ IE +VVTW+++IAGY+Q G FEAL
Sbjct: 313 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALD 372
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR--TEFDATGPVGNALIS 321
+F ML S +P+ TL S LS CA+ L GK+ H + I+ D P + ++
Sbjct: 373 VFRQMLLCGS-EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMV- 430
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVA 379
L+D Y K AR +FD + +DR VV
Sbjct: 431 ---------------------------INALIDMYSKCKSPKAARAMFDLIPPKDRSVVT 463
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
WT ++ G Q+G +A+ELF M++ PN +T+S L + L +L G+QIHA
Sbjct: 464 WTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAY 523
Query: 438 ALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
LR+ E++ L V+N LI MYSK+G+++AAR VF+ +H R VSWTS++ HG GE
Sbjct: 524 VLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN-GVSWTSLMTGYGMHGRGE 582
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA+Q+F M ++ + PD +T+V VL AC+H G+V+QG Y+N M + P H+A M
Sbjct: 583 EALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACM 642
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAG L EA I MP++P W +LLSACRV+ N++LG+ AA +LL +E N
Sbjct: 643 VDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGND 702
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G+Y+ L N+Y++ W+D A IR MK G+KK G SWVQ + F DW HP
Sbjct: 703 GSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQ 762
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
IY+ + + IK +G+VPD LHDV+++ K +L HSEKLA+A+G+++T +
Sbjct: 763 QIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPI 822
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RI KNLR C DCHSA +I +++ EI+VRD++RFHHFK G CSCR YW
Sbjct: 823 RITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 258/502 (51%), Gaps = 55/502 (10%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W +I +G ++ ++++ M + P +T VL +C + G VH+ V
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
+G V V N L++MY + G +W + AR
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCG------------------AW-------------ENARQ 201
Query: 233 QFDQMIER---DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
FD+M ER D+V+WNS++A Y Q G A+ MF M +D ++PD +L + L ACA
Sbjct: 202 VFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACA 261
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
++ GKQ+H Y +R+ VGNA++ YAK G +E A K+ E+ + +V+++
Sbjct: 262 SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK--DVVSW 319
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
++ GY +IG A +F+ +R+ +VV W+A++ GY Q GL +A+++FR M+
Sbjct: 320 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL 379
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-------SGEASSLSVSNALITMYS 458
G +PN TL ++LS +S +L HGK+ H A++ + L V NALI MYS
Sbjct: 380 CGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 439
Query: 459 KAGNINAARRVFNLIHWRQET-VSWTSMIVALAQHGLGEEAIQLFERMLELG--IKPDHI 515
K + AAR +F+LI + + V+WT +I AQHG EA++LF +ML+ + P+
Sbjct: 440 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 499
Query: 516 TYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFI 573
T L AC G + G++ + +++N + + A+ ++D+ ++G + A
Sbjct: 500 TISCALMACARLGALRFGRQIHAYVLRN--RFESAMLFVANCLIDMYSKSGDVDAARVVF 557
Query: 574 ENMPLEPDVVAWGSLLSACRVH 595
+NM + + V+W SL++ +H
Sbjct: 558 DNMH-QRNGVSWTSLMTGYGMH 578
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 154/344 (44%), Gaps = 77/344 (22%)
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V WN +I G+ + L ++ M + +PD +T L AC + + G +H
Sbjct: 110 VFWWNQLIRRSVHLGFLEDVLQLYRRMQR-LGWRPDHYTFPFVLKACGEIPSFRCGASVH 168
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
A + + F+ VGN L+S Y + G E A
Sbjct: 169 AVVFASGFEWNVFVGNGLVSMYGRCGAWENA----------------------------- 199
Query: 362 IGPARRIFDSLRDR---DVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSA 417
R++FD +R+R D+V+W +++ Y Q G + A+++F M + G +P+ +L
Sbjct: 200 ----RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVN 255
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF------N 471
+L +S+ + GKQ+H ALRSG + V NA++ MY+K G + A +VF +
Sbjct: 256 VLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD 315
Query: 472 LIHW-----------------------RQE-----TVSWTSMIVALAQHGLGEEAIQLFE 503
++ W R+E V+W+++I AQ GLG EA+ +F
Sbjct: 316 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 375
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
+ML G +P+ +T V +L+ C G + G+ + H IK
Sbjct: 376 QMLLCGSEPNVVTLVSLLSGCASAGTLLHGKE-----THCHAIK 414
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 138/284 (48%), Gaps = 26/284 (9%)
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V W ++ G +D ++L+R M R G +P++YT +L + S G +HA
Sbjct: 110 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 169
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR--QETVSWTSMIVALAQHGL 494
SG ++ V N L++MY + G AR+VF+ + R + VSW S++ A Q G
Sbjct: 170 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 229
Query: 495 GEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
A+++FERM E LGI+PD ++ V VL AC G +G K VH F
Sbjct: 230 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG-------KQVHGYALRSGLF 282
Query: 554 A------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LG---K 602
++VD+ + G+++EA E M ++ DVV+W ++++ D LG K
Sbjct: 283 EDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVSWNAMVTGYSQIGRFDDALGLFEK 341
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
I EK+ L N +SA+ Y+ G +A ++ + M G
Sbjct: 342 IREEKIEL----NVVTWSAVIAGYAQRGLGFEALDVFRQMLLCG 381
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRSG 442
L+G ++ + S+ R PKP L+ S +SS L +L S
Sbjct: 5 LIGSLKSAATTATATMLISLPRLKPKPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASA 64
Query: 443 EASSLSV--------SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH-G 493
E + + +I+MY + A V +H TV W + ++ + H G
Sbjct: 65 ELTHQQLLVQGLPHDPTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLG 124
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
E+ +QL+ RM LG +PDH T+ VL AC G + + +VH + F
Sbjct: 125 FLEDVLQLYRRMQRLGWRPDHYTFPFVLKAC---GEIPS----FRCGASVHAVV-----F 172
Query: 554 AS-----------MVDLLGRAGLLQEAYNFIENMPLE--PDVVAWGSLLSA 591
AS +V + GR G + A + M D+V+W S+++A
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 223
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 294/795 (36%), Positives = 445/795 (55%), Gaps = 81/795 (10%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKL--VHARIIKCGLHLSVFLKNSLMNFY 58
+ + +PP + LE + HL NL ++ P + L +H+ IIK GLH ++F ++ L+ F
Sbjct: 13 LPSSDPPYKL--LENHPHL---NLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFC 67
Query: 59 AKTES--ISYAKKVFDEM--PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
A + S +SYA +F + + WNT++ A++ L P S
Sbjct: 68 ALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHS-------------LTPTPTS---- 110
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
++ +F +M+ + P T S+ SC K++H+ +K
Sbjct: 111 --------------SLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKL 156
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
L +V SL++MY++VG+ A+ VFD L++ S+ +++ ++ G +D AR F
Sbjct: 157 ALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLF 216
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D++ +DVV+WN+MIAGY Q+G EAL F M +++ + P++ T+ S LSAC +L L
Sbjct: 217 DEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM-QEADVSPNQSTMVSVLSACGHLRSL 275
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
+LGK I +++ F + NAL+ Y+K G + A+K+
Sbjct: 276 ELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKL------------------- 316
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
FD + D+DV+ W M+ GY L ++A+ LF M+RE PN+ T
Sbjct: 317 --------------FDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVT 362
Query: 415 LSAMLSVSSSLASLDHGKQIHASALR----SGEASSLSVSNALITMYSKAGNINAARRVF 470
A+L +SL +LD GK +HA + +G +++S+ ++I MY+K G + A +VF
Sbjct: 363 FLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVF 422
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ R SW +MI LA +G E A+ LFE M+ G +PD IT+VGVL+ACT G V
Sbjct: 423 RSMGSRS-LASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFV 481
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
E G RY++ M + I P H+ M+DLL R+G EA + NM +EPD WGSLL+
Sbjct: 482 ELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLN 541
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
ACR+H ++ G+ AE+L +EP+NSGAY L N+Y+ G+W+D A IR + G+KK
Sbjct: 542 ACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKV 601
Query: 651 QGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVK 710
G + ++I VH F V D HPQ + I+ + ++ ++E GFVPDT+ VL+D++E+ K
Sbjct: 602 PGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWK 661
Query: 711 EQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATR 770
E L HSEKLAIAFGLIST +T+RI+KNLRVC +CHSA K I K+ +REI+ RD R
Sbjct: 662 EGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNR 721
Query: 771 FHHFKKGLCSCRDYW 785
FHHFK G CSC D W
Sbjct: 722 FHHFKDGFCSCNDRW 736
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 300/769 (39%), Positives = 437/769 (56%), Gaps = 76/769 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM---PVKTLCSWNTILSA 88
G VHA + G +VF+ N L++ Y + + A++VFDEM V L SWN+I++A
Sbjct: 145 GASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 204
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFT 147
Y + G DS+ A++MF M +D + P +
Sbjct: 205 YMQGG---------------DSI----------------RAMKMFERMTEDLGIRPDAVS 233
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ +VL +C ++G S GK+VH + +++GL V V N++++MYAK G A VF+ M+
Sbjct: 234 LVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK 293
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALG 263
+K+V SWN +V+ + GR D A F+++ IE +VVTW+++IAGY+Q G FEAL
Sbjct: 294 VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALD 353
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR--TEFDATGPVGNALIS 321
+F M S +P+ TL S LS CA L GK+ H + I+ D P + ++
Sbjct: 354 VFRQMRLCGS-EPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMV- 411
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVA 379
L+D Y K AR +FD + +DR VV
Sbjct: 412 ---------------------------INALIDMYSKCKSPKAARAMFDLIPPKDRSVVT 444
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
WT ++ G Q+G +A+ELF M++ PN +T+S L + L +L G+QIHA
Sbjct: 445 WTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAY 504
Query: 438 ALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
LR+ E++ L V+N LI MYSK+G+++AAR VF+ +H R VSWTS++ HG GE
Sbjct: 505 VLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN-GVSWTSLMTGYGMHGRGE 563
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA+Q+F M ++G+ PD +T+V VL AC+H G+V+QG Y+N M + P H+A M
Sbjct: 564 EALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACM 623
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAG L EA I MP++P W +LLSACRV+ N++LG+ AA +LL +E N
Sbjct: 624 VDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGND 683
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G+Y+ L N+Y++ W+D A IR MK G+KK G SWVQ + F DW HP
Sbjct: 684 GSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQ 743
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
IY+ + + IK +G+VPD LHDV+++ K +L HSEKLA+A+G+++T +
Sbjct: 744 QIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPI 803
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RI KNLR C DCHSA +I +++ EI+VRD++RFHHFK G CSCR YW
Sbjct: 804 RITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 262/512 (51%), Gaps = 56/512 (10%)
Query: 104 LMPNRDSVSWTTIIVTYN-EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS 162
L P+ +V W ++ + +G ++ ++++ M + P +T VL +C +
Sbjct: 84 LHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFR 143
Query: 163 AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI 222
G VH+ V +G V V N L++MY + G +W
Sbjct: 144 CGASVHAVVFASGFEWNVFVGNGLVSMYGRCG------------------AW-------- 177
Query: 223 HSGRLDLARAQFDQMIER---DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
+ AR FD+M ER D+V+WNS++A Y Q G A+ MF M +D ++PD
Sbjct: 178 -----ENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAV 232
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
+L + L ACA++ GKQ+H Y +R+ VGNA++ YAK G +E A K+ E+
Sbjct: 233 SLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERM 292
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKD 395
+ +V+++ ++ GY +IG A +F+ +R+ +VV W+A++ GY Q GL +
Sbjct: 293 KVK--DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFE 350
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-------SGEASSLS 448
A+++FR M G +PN TL ++LS + +L HGK+ H A++ + L
Sbjct: 351 ALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLM 410
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQET-VSWTSMIVALAQHGLGEEAIQLFERMLE 507
V NALI MYSK + AAR +F+LI + + V+WT +I AQHG EA++LF +ML+
Sbjct: 411 VINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQ 470
Query: 508 LG--IKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFAS-MVDLLGRA 563
+ P+ T L AC G + G++ + +++N + + A+ ++D+ ++
Sbjct: 471 PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRN--RFESAMLFVANCLIDMYSKS 528
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
G + A +NM + + V+W SL++ +H
Sbjct: 529 GDVDAARVVFDNMH-QRNGVSWTSLMTGYGMH 559
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 26/284 (9%)
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V W ++ G +D ++L+R M R G +P++YT +L + S G +HA
Sbjct: 91 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHA 150
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR--QETVSWTSMIVALAQHGL 494
SG ++ V N L++MY + G AR+VF+ + R + VSW S++ A Q G
Sbjct: 151 VVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGD 210
Query: 495 GEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
A+++FERM E LGI+PD ++ V VL AC G +G K VH F
Sbjct: 211 SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRG-------KQVHGYALRSGLF 263
Query: 554 A------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LG---K 602
++VD+ + G+++EA E M ++ DVV+W ++++ D LG K
Sbjct: 264 EDVFVGNAVVDMYAKCGMMEEANKVFERMKVK-DVVSWNAMVTGYSQIGRFDDALGLFEK 322
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
I EK+ L N +SA+ Y+ G +A ++ + M+ G
Sbjct: 323 IREEKIEL----NVVTWSAVIAGYAQRGLGFEALDVFRQMRLCG 362
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 41/216 (18%)
Query: 402 SMVREGPKPNNY--------TLSAMLSVSSSL----ASLDHGKQIHASALRSGEASSLSV 449
S+ R PKP T S+ ++S+L SL + IH L G
Sbjct: 4 SLPRLKPKPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASAELIHQQLLVQGLPHD--- 60
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH-GLGEEAIQLFERMLEL 508
+I+MY + A V +H TV W + ++ + H G E+ +QL+ RM L
Sbjct: 61 PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRL 120
Query: 509 GIKPDHITYVGVLTAC-----------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
G +PDH T+ VL AC H + G + + N +V
Sbjct: 121 GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN------------GLV 168
Query: 558 DLLGRAGLLQEAYNFIENMPLE--PDVVAWGSLLSA 591
+ GR G + A + M D+V+W S+++A
Sbjct: 169 SMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAA 204
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/709 (38%), Positives = 417/709 (58%), Gaps = 12/709 (1%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+LS YA A V +L+P + S++T+I +++ +F +A+ F +M+ ++P
Sbjct: 54 LLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPD 113
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ S + +C L L ++VH +G V +SL++MY K A VFD
Sbjct: 114 NRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
M +V SW+ +V+ + G +D A+ F +M ++ ++++WN MIAG++ +G E
Sbjct: 174 RMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSE 233
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ MF +M +PD T++S L A +LE L +G IH Y+I+ + V +ALI
Sbjct: 234 AVLMFLDM-HLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----D 376
Y K ++ +Q + +++V + + G + G + + R+F L+D+ +
Sbjct: 293 DMYGKCSCTSEMSQVFDQ--MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELN 350
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+WT+M+ QNG + +A+ELFR M G KPN+ T+ +L ++A+L HGK H
Sbjct: 351 VVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHC 410
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+LR G ++ + V +ALI MY+K G I A+R F+ I + V W ++I A HG +
Sbjct: 411 FSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN-LVCWNAVIAGYAMHGKAK 469
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA+++F+ M G KPD I++ VL+AC+ GL E+G Y+N M + + I+ H+A M
Sbjct: 470 EAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACM 529
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
V LL RAG L++AY I MP+ PD WG+LLS+CRVH N+ LG++AAEKL +EP N
Sbjct: 530 VTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNP 589
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y+S G W + +R MK G++K G SW++++NKVH+ D HPQ
Sbjct: 590 GNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMT 649
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I K+ K+ E+K++G+ P+ VL DVEE KEQ+L HSEKLA+ FGL++TP L
Sbjct: 650 QIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPL 709
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++KNLR+C DCH IKFI REI VRD RFHHFK+G CSC DYW
Sbjct: 710 QVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 150/524 (28%), Positives = 248/524 (47%), Gaps = 52/524 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
+ VH G F+++SL++ Y K I A +VFD M + SW+ +++AYA+
Sbjct: 133 ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYAR 192
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
QG +D A +F+ M + + +SW +I +N G + A+ MF++M P T
Sbjct: 193 QGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTT 252
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
++SVL + L DL G +H +V+K GL V+++L++MY K VFD M
Sbjct: 253 ISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMD 312
Query: 208 LKNVSSWNVVVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+V S N + +G+ L L R DQ +E +VV+W SMIA SQNG D EAL
Sbjct: 313 HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALE 372
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M + + +KP+ T+ L AC N+ L GK H + +R VG+ALI Y
Sbjct: 373 LFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G ++ +R FD + +++V W A+
Sbjct: 432 AKCGRIQ---------------------------------ASRICFDGIPTKNLVCWNAV 458
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK-QIHASALRSG 442
+ GY +G K+A+E+F M R G KP+ + + +LS S + G ++ + + G
Sbjct: 459 IAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYG 518
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAI 499
+ + ++T+ S+AG + A + + + W +++ + H LGE A
Sbjct: 519 IEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Query: 500 QLFERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKN 542
E++ EL +P + Y+ + G+ + R +MMKN
Sbjct: 579 ---EKLFEL--EPSNPGNYILLSNIYASKGMWNEVNRVRDMMKN 617
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 222/491 (45%), Gaps = 78/491 (15%)
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
Q T+ + L S TA LS ++ H+ ++KTGL ++ LL+ YA
Sbjct: 14 VQHTIFNCLNSTTA--SLSQTRQAHAHILKTGLFNDTHLATKLLSHYA------------ 59
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
N+ + + L D + E +V +++++I +S+ AL
Sbjct: 60 -----NNMCFADATLVL--------------DLVPEPNVFSFSTLIYAFSKFHQFHHALS 100
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F+ ML L PD L S + ACA L LK +Q+H + FD+ V ++L+ Y
Sbjct: 101 TFSQMLT-RGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMY 159
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV----VA 379
K + A ++ ++ + +V++++ L+ Y + G + A+R+F + D V ++
Sbjct: 160 IKCNQIRDAHRVFDR--MFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLIS 217
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W M+ G+ +GL +AV +F M G +P+ T+S++L L L G IH +
Sbjct: 218 WNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVI 277
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFN--------------------------LI 473
+ G S VS+ALI MY K + +VF+ L
Sbjct: 278 KQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLR 337
Query: 474 HWRQ--------ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
+RQ VSWTSMI +Q+G EA++LF M G+KP+ +T +L AC
Sbjct: 338 LFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACG 397
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+ + G+ + ++ + T + S ++D+ + G +Q + + +P + ++V
Sbjct: 398 NIAALMHGKAAHCF--SLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVC 454
Query: 585 WGSLLSACRVH 595
W ++++ +H
Sbjct: 455 WNAVIAGYAMH 465
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 11/299 (3%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G L+H +IK GL + ++L++ Y K S +VFD+M + S N + +
Sbjct: 268 MGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLS 327
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ G+++ + +F + ++ + VSWT++I ++ GR A+ +F EM V P
Sbjct: 328 RNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSV 387
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T+ +L +C + L GK H F ++ G+S V V ++L++MYAK G ++ FDG+
Sbjct: 388 TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGI 447
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNSMIAGYSQNGYDFEAL 262
KN+ WN V++ + G+ A FD M D++++ +++ SQ+G E
Sbjct: 448 PTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGS 507
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
F +M ++ A ++ + KL +Q +A I R + V AL+S
Sbjct: 508 YYFNSMSSKYGIEARVEHYACMVTLLSRAGKL---EQAYAMIRRMPVNPDACVWGALLS 563
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 278/703 (39%), Positives = 411/703 (58%), Gaps = 66/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++S YAK G + A VF+ M +RD VSWTT+ Y E G + +++ + M+Q+ V
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P++ T +VL++C +L L GK++H+ +V++ V V+ +L MY K G AV
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCG------AV 297
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
D AR F+ + RDV+ WN+MI G +G EA
Sbjct: 298 KD-------------------------AREVFECLPNRDVIAWNTMIGGLVDSGQLEEAH 332
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
GMF MLK+ + PD+ T + LSACA L GK+IHA ++ + GNALI+
Sbjct: 333 GMFHRMLKEC-VAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINM 391
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+K G ++ AR++FD + RDVV+WTA
Sbjct: 392 YSKAGSMK---------------------------------DARQVFDRMPKRDVVSWTA 418
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY G ++ F+ M+++G + N T +L S+ +L GK+IHA +++G
Sbjct: 419 LVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAG 478
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ L+V+NAL++MY K G++ A RV + R + V+W ++I LAQ+G G EA+Q F
Sbjct: 479 IFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLIGGLAQNGRGLEALQKF 537
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M ++P+ T+V V++AC LVE+G+R + M+ + I PT H+A MVD+L R
Sbjct: 538 EVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILAR 597
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L EA + I MP +P WG+LL+ACR H N+++G+ AAE+ L +EP N+G Y +L
Sbjct: 598 AGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSL 657
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
+Y++ G W D A +RK MK GVKK G SW+++ +VH F D HP+ + IY+++
Sbjct: 658 SFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSEL 717
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ +IK +G+VPDT V+HD++++ KE+ + HHSEKLAIA+GLISTP T +R+ KNL
Sbjct: 718 EALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNL 777
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCH+A KFI K+ REI+ RDA RFHHFK G CSC DYW
Sbjct: 778 RVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 219/445 (49%), Gaps = 70/445 (15%)
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
+ +L SC DL+ GK+VH +++ G+ V + N+LL +Y G A+ +FD
Sbjct: 45 YDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDK 104
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
K+V SWNV MI+GY+ G EA +F
Sbjct: 105 FSNKSVVSWNV-------------------------------MISGYAHRGLGQEAFNLF 133
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+++ L+PDKFT S LSAC++ L G+++H ++ VGNALIS YAK
Sbjct: 134 -TLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAK 192
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G V A RR+FD++ RD V+WT +
Sbjct: 193 CGSVRDA---------------------------------RRVFDAMASRDEVSWTTLTG 219
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Y ++G +++++ + +M++EG +P+ T +LS SLA+L+ GKQIHA + S S
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS 279
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ VS AL MY K G + AR VF + R + ++W +MI L G EEA +F RM
Sbjct: 280 DVRVSTALTKMYIKCGAVKDAREVFECLPNR-DVIAWNTMIGGLVDSGQLEEAHGMFHRM 338
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-SMVDLLGRAG 564
L+ + PD +TY+ +L+AC G + G+ + + V + F +++++ +AG
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIH--ARAVKDGLVSDVRFGNALINMYSKAG 396
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLL 589
+++A + MP + DVV+W +L+
Sbjct: 397 SMKDARQVFDRMP-KRDVVSWTALV 420
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 191/402 (47%), Gaps = 72/402 (17%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D + L +C + L +GKQ+H +I+R
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKP------------------------- 77
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
NV TLL Y+ G + ARR+FD ++ VV+W M+ GY GL ++A
Sbjct: 78 --------NVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEA 129
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
LF M +EG +P+ +T ++LS SS A+L+ G+++H + +G A++ +V NALI+M
Sbjct: 130 FNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISM 189
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y+K G++ ARRVF+ + R E VSWT++ A A+ G +E+++ + ML+ G++P IT
Sbjct: 190 YAKCGSVRDARRVFDAMASRDE-VSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRIT 248
Query: 517 YVGVLTACTHGGLVEQGQRYYNMM----------------------------KNVHKIKP 548
Y+ VL+AC +E+G++ + + + V + P
Sbjct: 249 YMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Query: 549 TPSHFA--SMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGK- 602
A +M+ L +G L+EA+ M E PD V + ++LSAC L GK
Sbjct: 309 NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKE 368
Query: 603 --IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
A K L+ G +AL N+YS G +DA + M
Sbjct: 369 IHARAVKDGLVSDVRFG--NALINMYSKAGSMKDARQVFDRM 408
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 142/595 (23%), Positives = 249/595 (41%), Gaps = 110/595 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA+I++ H V + +L Y K ++ A++VF+ +P + + +WNT++
Sbjct: 265 GKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVD 324
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G+L+ A MF M+++ V P + T ++
Sbjct: 325 SGQLE-------------------------------EAHGMFHRMLKECVAPDRVTYLAI 353
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C G L+ GK++H+ VK GL V N+L+NMY+K G A+ VFD M ++V
Sbjct: 354 LSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDV 413
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW +++ GY+ G E+ F ML+
Sbjct: 414 VSW-------------------------------TALVGGYADCGQVVESFSTFKKMLQQ 442
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ +K T L AC+N LK GK+IHA +++ A V NAL+S Y K G VE
Sbjct: 443 -GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVED 501
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A ++ E G+S +V+ W ++ G QNG
Sbjct: 502 AIRVSE--GMSTRDVV-------------------------------TWNTLIGGLAQNG 528
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVS 450
+A++ F M E +PN T ++S ++ G++ AS + G +
Sbjct: 529 RGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHY 588
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
++ + ++AG++ A V + ++ W +++ A HG E Q E+ L+L
Sbjct: 589 ACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKL-- 646
Query: 511 KPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+P + TYV + G+ + +MK +K P S +++ G E
Sbjct: 647 EPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKE-RGVKKEPGR--SWIEVAG------EV 697
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++F+ P S L A + LG + + ++ + D G A+C+
Sbjct: 698 HSFVAGDQSHPRTEEIYSELEAL-TKQIKSLGYVPDTRFVMHDLDQEGKERAVCH 751
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 38/327 (11%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L + + GK +HAR +K GL V N+L+N Y+K S+ A++VFD MP
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + SW ++ YA + G+ + F +
Sbjct: 410 KRDVVSWTALVGGYA-------------------------------DCGQVVESFSTFKK 438
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+Q V + T VL +C+ L GK++H+ VVK G+ + V N+L++MY K G
Sbjct: 439 MLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGS 498
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAG 251
A V +GM ++V +WN ++ +GR A +F+ M + + T+ ++++
Sbjct: 499 VEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSA 558
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
E FA+M KD + P + A + A L + + I+ F
Sbjct: 559 CRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDV---ILTMPFKP 615
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQ 338
+ + AL++ G VEI ++ EQ
Sbjct: 616 SAAMWGALLAACRAHGNVEIGEQAAEQ 642
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 45/280 (16%)
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
++ + + ++G + ++Y +L L GKQ+H LR G ++ + N L+ +Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
G++N ARR+F+ + VSW MI A GLG+EA LF M + G++PD T+
Sbjct: 90 VHCGSVNEARRLFDKFS-NKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148
Query: 518 VGVLTACTHG-----------------------------------GLVEQGQRYYNMMKN 542
V +L+AC+ G V +R ++ M +
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEA---YNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
++ T ++ +G QE+ Y+ + + P + + ++LSAC L+
Sbjct: 209 RDEVSWT-----TLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALE 263
Query: 600 LGK-IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
GK I A+ + + +AL +Y CG +DA +
Sbjct: 264 KGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 295/840 (35%), Positives = 452/840 (53%), Gaps = 136/840 (16%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LLQS +K+++ VGK VH I++CG+ +V++ N
Sbjct: 31 YVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITN----------------------- 67
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
T+L YA G ++ A ++F+ N+ VSW +I Y G + A +F
Sbjct: 68 --------TLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTL 119
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M Q+++ P +FT S+L++C++ L+ G+++H V++ GL+ V N+L++MYAK G
Sbjct: 120 MQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS 179
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD M RD V+W ++ Y+++
Sbjct: 180 VRDARRVFDAM-------------------------------ASRDEVSWTTLTGAYAES 208
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
GY E+L + ML++ ++P + T + LSAC +L L+ GKQIHA+I+ +E+ + V
Sbjct: 209 GYGEESLKTYHAMLQE-RVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRV 267
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--- 372
AL Y K G + A+++ E +SY +VIA+ T++ G++ G + A F +
Sbjct: 268 STALTKMYMKCGAFKDAREVFE--CLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEE 325
Query: 373 ---RDR---------------------------------DVVAWTAMLVGYEQNGLNKDA 396
DR DV A++ Y + G KDA
Sbjct: 326 GVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDA 385
Query: 397 VELF-------------------------------RSMVREGPKPNNYTLSAMLSVSSSL 425
++F + M+++G K N T +L S+
Sbjct: 386 RQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNP 445
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
+L GK+IHA +++G + L+V+NAL++MY K G++ A RVF + R + V+W ++
Sbjct: 446 VALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTL 504
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I L Q+G G EA+Q +E M G++P+ T+V VL+AC LVE+G+R + M +
Sbjct: 505 IGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYG 564
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I PT H+A MVD+L RAG L+EA + I +PL+P WG+LL+ACR+H N+++G+ AA
Sbjct: 565 IVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAA 624
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
E L +EP N+G Y +L +Y++ G W D A +RK MK GVKK G SW++I +VH F
Sbjct: 625 EHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSF 684
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
D HP+ IY ++ + ++K +G+VPDT V+HD++++ KE+ + HHSEKLAIA+
Sbjct: 685 VARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAY 744
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GLISTP T +RI KNLRVC DCH+A KFI K+ REI+ RDA RFHHFK G CSC DYW
Sbjct: 745 GLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 235/514 (45%), Gaps = 103/514 (20%)
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
+ +L SC DL+ GK+VH +++ G+ V +TN+LL +YA
Sbjct: 29 YDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA-------------- 74
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
H G ++ AR FD+ + VV+WN MI+GY+ G EA +F
Sbjct: 75 -----------------HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLF 117
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+++ L+PDKFT S LSAC++ L G++IH ++ VGNALIS YAK
Sbjct: 118 -TLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAK 176
Query: 326 VGGVEIAQKI---------------------------------------VEQSGISYLNV 346
G V A+++ V S I+Y+NV
Sbjct: 177 CGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNV 236
Query: 347 IAF-----------------------------TTLLDGYIKIGDIGPARRIFDSLRDRDV 377
++ T L Y+K G AR +F+ L RDV
Sbjct: 237 LSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDV 296
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+AW M+ G+ +G ++A F M+ EG P+ T + +LS + L GK+IHA
Sbjct: 297 IAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHAR 356
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A + G S + NALI MYSKAG++ AR+VF+ + +++ VSWT+++ A E
Sbjct: 357 AAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLGRYADCDQVVE 415
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
+ F++ML+ G+K + ITY+ VL AC++ ++ G+ + + + A M
Sbjct: 416 SFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALM- 474
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + G +++A E M + DVV W +L+
Sbjct: 475 SMYFKCGSVEDAIRVFEGMSMR-DVVTWNTLIGG 507
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 188/402 (46%), Gaps = 72/402 (17%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D + L +C + L +GKQ+H +I+R C K
Sbjct: 27 DSYDYVKLLQSCVKAKDLAVGKQVHEHILR---------------CGVKP---------- 61
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
NV TLL Y G + AR++FD ++ VV+W M+ GY GL ++A
Sbjct: 62 --------NVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEA 113
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
LF M +E +P+ +T ++LS SS A L+ G++IH + +G A+ +V NALI+M
Sbjct: 114 FNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISM 173
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y+K G++ ARRVF+ + R E VSWT++ A A+ G GEE+++ + ML+ ++P IT
Sbjct: 174 YAKCGSVRDARRVFDAMASRDE-VSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRIT 232
Query: 517 YVGVLTACTHGGLVEQGQRYY-------------------------NMMKNVHKIKPTPS 551
Y+ VL+AC +E+G++ + K+ ++ S
Sbjct: 233 YMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLS 292
Query: 552 H-----FASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGK- 602
+ + +M+ +G L+EA+ M E PD + ++LSAC L GK
Sbjct: 293 YRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKE 352
Query: 603 --IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
A K L+ G +AL N+YS G +DA + M
Sbjct: 353 IHARAAKDGLVSDVRFG--NALINMYSKAGSMKDARQVFDRM 392
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 35/284 (12%)
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
++ + + R+GP+ ++Y +L L GKQ+H LR G ++ ++N L+ +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
+ G++N AR++F+ + VSW MI A GL +EA LF M + ++PD T+
Sbjct: 74 AHCGSVNEARQLFDKFS-NKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTF 132
Query: 518 VGVLTACTHGGLVEQGQRYY-------------------NMMKNVHKIKPTPSHFASMVD 558
V +L+AC+ ++ G+ + +M ++ F +M
Sbjct: 133 VSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMAS 192
Query: 559 --------LLG---RAGLLQEA---YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
L G +G +E+ Y+ + + P + + ++LSAC L+ GK
Sbjct: 193 RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQI 252
Query: 605 AEKLLLIEPDNSGAYS-ALCNLYSSCGKWEDAANIRKSMKYVGV 647
++ E + S AL +Y CG ++DA + + + Y V
Sbjct: 253 HAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDV 296
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/785 (36%), Positives = 441/785 (56%), Gaps = 70/785 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+PP + + + L SN K+ K +H++IIK GLH + F + L+ F
Sbjct: 19 PSPPYKLVH-DHPSLTLLSNCKTLQTL--KQIHSQIIKTGLHNTHFALSKLIEF------ 69
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
A + G L A +F + N + V W +I +
Sbjct: 70 -----------------------CAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSS 106
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
A+ +V M+ P ++T S+ SCT + GK+VH+ V+K GL V
Sbjct: 107 ESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVH 166
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
SL+NMYA+ G+ + A+ VFD +++ S+ +++ + G LD AR FD++ RDVV
Sbjct: 167 TSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVV 226
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL-EKLKLGKQIHA 302
+WN+MI+GY+Q+G EA+ F M + + + P+ T+ S LSACA L+LG + +
Sbjct: 227 SWNAMISGYAQSGRVEEAMAFFEEM-RRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+I E G+ N+ L+D Y+K GD+
Sbjct: 286 WI--------------------------------EDRGLGS-NIRLVNGLIDMYVKCGDL 312
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +F+ ++D++VV+W M+ GY K+A+ LFR M++ PN+ T ++L
Sbjct: 313 EEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPAC 372
Query: 423 SSLASLDHGKQIHASALRSGEA--SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
++L +LD GK +HA ++ ++ +++++ +LI MY+K G++ A+R+F+ ++ +
Sbjct: 373 ANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMN-TKSLA 431
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
+W +MI A HG + A+ LF RM G PD IT+VGVLTAC H GL+ G+RY++ M
Sbjct: 432 TWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSM 491
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+K+ P H+ M+DL GRAGL EA ++NM ++PD W SLL ACR+H+ ++L
Sbjct: 492 IQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIEL 551
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
+ A+ L +EP+N AY L N+Y+ G+WED A IR + +KK G S +++ +
Sbjct: 552 AESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDS 611
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
VH F V D +HPQ + IY + +I +++ GFVPDT+ VL+D++E+ KE +L HHSEK
Sbjct: 612 VVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEK 671
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAFGLIST TT+RIMKNLRVC +CHSA K I K+ +REI+ RD RFHHFK G CS
Sbjct: 672 LAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCS 731
Query: 781 CRDYW 785
C+DYW
Sbjct: 732 CKDYW 736
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 270/750 (36%), Positives = 434/750 (57%), Gaps = 43/750 (5%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA + K G + ++NS++ Y K + A+ VF ++ +L WN+++ Y++
Sbjct: 168 LHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYG 227
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
A ++FN MP RD VSW T+I +++ G + MFVEM P T SVL++
Sbjct: 228 PYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSA 287
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C + DL G +H+ +++ S + N L++MYAK G
Sbjct: 288 CASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCG-------------------- 327
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
LDLA+ F + E D ++WNS+I G G +AL +F N ++ SS+
Sbjct: 328 -----------CLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILF-NQMRRSSV 375
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
D+F L + L C+ + G+ +H Y I++ ++ PVGNA+I+ YAK G + A
Sbjct: 376 VLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADL 435
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + N I++T ++ + + GDIG AR FD + +R++V W +ML Y QNG ++
Sbjct: 436 VFRLMPLR--NTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSE 493
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+ ++L+ SM G +P+ T + + + LA + G Q+ A + G + ++SV+N+++
Sbjct: 494 EGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIV 553
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
TMYS+ G I A+ F+ I ++ +SW +M+ A AQ+GLG + I FE ML+ KP+H
Sbjct: 554 TMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNH 612
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
I+YV VL+ C+H GLV +G+ Y++ M V I PT HF+ MVDLLGRAGLL++A + IE
Sbjct: 613 ISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIE 672
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
MP +P+ W +LL +CRVH +L L + AA+KL+ ++ + S Y L N+YS G+ ++
Sbjct: 673 GMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDN 732
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A++RK MK G++ ++G SW+++ N+VHVF V++ HPQ +Y K+ ++ I++ G
Sbjct: 733 VADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGK 792
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
S +H + ++HSEKLA AFGL++ P + +MKNLRVC+DCH IK
Sbjct: 793 YITVESSVHRSK--------KYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKL 844
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+ + RE+++RD RFHHFK G+CSC+DY
Sbjct: 845 LSLVTSRELIMRDGYRFHHFKDGICSCKDY 874
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 301/615 (48%), Gaps = 74/615 (12%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
+FY Q + ++P + + +HA++I GL S+FL N+L++ Y+ A +VF E
Sbjct: 9 KFYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQE 68
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR--DSVSWTTIIVTYNEIGRFKNAIR 131
+ + +WNT++ A R+ A ++F+ MP R DSVSWTT+I Y++ G +
Sbjct: 69 THHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFE 128
Query: 132 MFVEMVQDQVLPTQ----FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
F M++D + F+ TSV+ +C +LGD ++H+ V K G + NS++
Sbjct: 129 TFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVV 188
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
MY K GD +A+ VF + ++ WN ++ + A F++M ERD V+WN+
Sbjct: 189 GMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNT 248
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+I+ +SQ+G+ + L MF M + P+ T S LSACA+ LK G +HA I+R
Sbjct: 249 LISIFSQHGFGVQCLAMFVEMC-NQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRM 307
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
E GN LI YAK G +++ A+R
Sbjct: 308 EHSLDLVFGNGLIDMYAKCGCLDL---------------------------------AKR 334
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F SLR+ D ++W +++ G GL +DA+ LF M R + + L +L V S
Sbjct: 335 VFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDY 394
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G+ +H ++SG SS V NA+ITMY+K G+ + A VF L+ R T+SWT+MI
Sbjct: 395 ASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRN-TISWTAMIT 453
Query: 488 ALA-------------------------------QHGLGEEAIQLFERMLELGIKPDHIT 516
A + Q+G EE ++L+ M G++PD IT
Sbjct: 454 AFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWIT 513
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+ + AC +V+ G + + S S+V + R GL++EA N +++
Sbjct: 514 FTTSIRACADLAIVKLGMQVVTHATKF-GLSLNVSVANSIVTMYSRCGLIKEAKNTFDSI 572
Query: 577 PLEPDVVAWGSLLSA 591
+ D+++W ++L+A
Sbjct: 573 D-DKDLISWNAMLAA 586
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 33/308 (10%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+L+H IK G+ S + N+++ YAK A VF MP++ SW +++A++
Sbjct: 397 TGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFS 456
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + A F++MP R+ V+W +++ TY + G + ++++V M + V P T T+
Sbjct: 457 RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT 516
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ +C L + G +V + K GLS V+V NS++ MY++ G AK FD + K+
Sbjct: 517 SIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKD 576
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ ++WN+M+A ++QNG + + F +MLK
Sbjct: 577 L-------------------------------ISWNAMLAAFAQNGLGIKVIDTFEDMLK 605
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNALISCYAKVGGV 329
+ KP+ + S LS C+++ + GK + R T + ++ + G +
Sbjct: 606 -TECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLL 664
Query: 330 EIAQKIVE 337
E A+ ++E
Sbjct: 665 EQAKDLIE 672
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/701 (38%), Positives = 413/701 (58%), Gaps = 67/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+++ YAK ++D A ++F+ MP RD VSW TII +++ G K A+ + + M + P
Sbjct: 188 VVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPD 247
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T+ +VL + +G L GK +H + ++ G + VN++ +L +MY+K G
Sbjct: 248 SITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS--------- 298
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
++ AR FD M ++ VV+WNSM+ GY QNG +A+ +
Sbjct: 299 ----------------------VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAV 336
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F ML++ + P T+ L ACA+L L+ GK +H ++ + + V N+LIS Y+
Sbjct: 337 FEKMLEEG-IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K V+IA I F++L R V+W AM+
Sbjct: 396 KCKRVDIASDI---------------------------------FNNLNGRTHVSWNAMI 422
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
+GY QNG +A+ F M G KP+++T+ +++ + L+ H K IH +RS
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
++ V+ AL+ MYSK G I+ AR++F++I R ++W +MI HGLG A+ LF++
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRH-VITWNAMIDGYGTHGLGRAALDLFDK 541
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + ++P+ ITY+ V++AC+H GLV++G R++ MK + ++P+ H+ +MVDLLGRAG
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAG 601
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++EA++FIENMP+ P + +G+ AC++HKN+++G+ AA+KL + PD G + L N
Sbjct: 602 RIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLAN 661
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+S KW A +RK+M+ G+KKT G S V+++N+VH F HPQ IY + +
Sbjct: 662 IYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEE 721
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ EIK G+VPDT +L DVE+DV+EQ+L HSEKLAIAFGL++T TT+ + KNLRV
Sbjct: 722 LVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRV 780
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+A K+I + REI+VRD RFHHFK G+CSC DYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/645 (25%), Positives = 273/645 (42%), Gaps = 144/645 (22%)
Query: 39 IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLA 98
+IK GL+ + L++ ++K SI+ A +VF+ + K ++T+L YAK L+
Sbjct: 72 VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLE-- 129
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
A+ M D V P + T +L C
Sbjct: 130 -----------------------------TALAFLCRMRYDDVKPVVYNFTYLLKVCGDN 160
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
DL GK++H ++ + V ++NMYAK A +FD M +++ SWN +
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTI- 219
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
IAG+SQNG+ +AL + M +D +PD
Sbjct: 220 ------------------------------IAGFSQNGFAKKALELVLRM-QDEGQRPDS 248
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
TL + L A A++ L +GK IH Y IR F + AL Y+K G VE A+ I +
Sbjct: 249 ITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFD- 307
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
G+ V+++ +++DGY+ QNG + A+
Sbjct: 308 -GMDQKTVVSWNSMMDGYV-------------------------------QNGEPEKAIA 335
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
+F M+ EG P T+ L + L L+ GK +H + S +SV N+LI+MYS
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYS 395
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K ++ A +FN ++ R VSW +MI+ AQ+G EA+ F M LG+KPD T V
Sbjct: 396 KCKRVDIASDIFNNLNGRTH-VSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMV 454
Query: 519 GVLTACT-----------HG------------------------GLVEQGQRYYNMMKNV 543
V+ A HG G + ++ ++M+ +
Sbjct: 455 SVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR 514
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDL 600
H I + +M+D G GL + A + + M +EP+ + + S++SAC +D
Sbjct: 515 HVIT-----WNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDE 569
Query: 601 GK---IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
G + ++ +EP + Y A+ +L G+ ++A + ++M
Sbjct: 570 GLRHFKSMKQDYGLEP-SMDHYGAMVDLLGRAGRIKEAWDFIENM 613
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 205/442 (46%), Gaps = 72/442 (16%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+VSL G ++ A F+ + ++ +++M+ GY++N AL M D +KP
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDD-VKP 145
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ L C + LK GK+IH +I F A
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAA------------------------- 180
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
NV A T +++ Y K I A ++FD + +RD+V+W ++ G+ QNG K A
Sbjct: 181 --------NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+EL M EG +P++ TL +L ++ + L GK IH A+R+G A +++S AL M
Sbjct: 233 LELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADM 292
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YSK G++ AR +F+ + ++ VSW SM+ Q+G E+AI +FE+MLE GI P +T
Sbjct: 293 YSKCGSVETARLIFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+ L AC G +E+G K VHK F++ +
Sbjct: 352 IMEALHACADLGDLERG-------KFVHK--------------------------FVDQL 378
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
L D+ SL+S K +D IA++ + +++A+ Y+ G+ +A
Sbjct: 379 NLGSDISVMNSLISMYSKCKRVD---IASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435
Query: 637 NIRKSMKYVGVKKTQGFSWVQI 658
N MK +G+ K F+ V +
Sbjct: 436 NCFSEMKSLGM-KPDSFTMVSV 456
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 209/507 (41%), Gaps = 138/507 (27%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++I +VF ++N YAK I A K+FD MP + L SWNTI++ +++
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G K A+ + + M + P T+ +V
Sbjct: 226 NGFA-------------------------------KKALELVLRMQDEGQRPDSITLVTV 254
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + +G L GK +H + ++ G + VN++ +L +MY+K G A+ +FDGM K V
Sbjct: 255 LPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTV 314
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIER------------------------------- 240
SWN ++ ++ +G + A A F++M+E
Sbjct: 315 VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKF 374
Query: 241 --------DVVTWNSMIAGYS-------------------------------QNGYDFEA 261
D+ NS+I+ YS QNG EA
Sbjct: 375 VDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEA 434
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L F+ M K +KPD FT+ S + A A L + K IH IIR+ D V AL+
Sbjct: 435 LNCFSEM-KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVD 493
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+K G + +A+K+ + IS +VI + ++D
Sbjct: 494 MYSKCGAIHMARKLFDM--ISDRHVITWNAMID--------------------------- 524
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
GY +GL + A++LF M + +PN+ T +++S S +D G + H +++
Sbjct: 525 ----GYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQ 579
Query: 442 --GEASSLSVSNALITMYSKAGNINAA 466
G S+ A++ + +AG I A
Sbjct: 580 DYGLEPSMDHYGAMVDLLGRAGRIKEA 606
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+ +L + +S+ L QI +++G + L++++SK G+IN A RVF I
Sbjct: 53 AVLLELCTSMKEL---HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ + + + +M+ A++ E A+ RM +KP + +L C +++G+
Sbjct: 110 KLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + + +V++ + + +AY + MP E D+V+W ++++
Sbjct: 169 IHGQLI-TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERDLVSWNTIIAG 222
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 299/825 (36%), Positives = 448/825 (54%), Gaps = 131/825 (15%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+ G+ +H + IK G V + SL++ Y K + + VFDEM
Sbjct: 112 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK------------ 159
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
R+ V+WTT+I Y + + +F+ M + P FT
Sbjct: 160 -------------------ERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFT 200
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ L G G +VH+ VVK GL + V+NSL+N+Y K G+
Sbjct: 201 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN------------ 248
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ AR FD+ + VVTWNSMI+GY+ NG D EALGMF +
Sbjct: 249 -------------------VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI----------IRTE--------- 308
M + + ++ + + AS + CANL++L+ +Q+H + IRT
Sbjct: 290 M-RLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348
Query: 309 --------FDATGPVGN-----ALISCYAKVGGVEIA--------QKIVEQSGISY---- 343
F TG +GN A+IS + + G E A +K V + +Y
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408
Query: 344 --LNVIA-------------------FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
L VI+ T LLD Y+K+G + A ++F + ++D+VAW+A
Sbjct: 409 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSA 468
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV-SSSLASLDHGKQIHASALRS 441
ML GY Q G + A+++F + + G KPN +T S++L+V +++ AS+ GKQ H A++S
Sbjct: 469 MLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKS 528
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
SSL VS+AL+TMY+K G+I +A VF ++ VSW SMI AQHG +A+ +
Sbjct: 529 RLDSSLCVSSALLTMYAKKGHIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDV 587
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + +K D +T++GV ACTH GLVE+G++Y+++M KI PT H + MVDL
Sbjct: 588 FKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 647
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L++A I+NMP W ++L+ACRVHK +LG++AAEK++ + P++S AY
Sbjct: 648 RAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVL 707
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ G W++ A +RK M VKK G+SW++++NK + F D HP +D IY K
Sbjct: 708 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMK 767
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + +K++G+ PDT+ VL D++++ KE +L HSE+LAIAFGLI+TP+ + L I+KN
Sbjct: 768 LEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKN 827
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK-GLCSCRDYW 785
LRVC DCH IK I K+ +REIVVRD+ RFHHF G+CSC D+W
Sbjct: 828 LRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 228/502 (45%), Gaps = 71/502 (14%)
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A RL A +F+ P+RD S+T+++ ++ GR + A R+F+ + + +
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL L D G+++H +K G V+V SL++ Y K G K
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK------------GSNFK 149
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+ R FD+M ER+VVTW ++I+GY++N + E L +F M
Sbjct: 150 D-------------------GRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRM- 189
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+D +P+ FT A+ L A G Q+H +++ D T PV N+LI+ Y K G V
Sbjct: 190 QDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 249
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
AR +FD + VV W +M+ GY
Sbjct: 250 R---------------------------------KARILFDKTEVKSVVTWNSMISGYAA 276
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NGL+ +A+ +F SM + + + ++++ + ++L L +Q+H S ++ G ++
Sbjct: 277 NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
AL+ YSK + A R+F + VSWT+MI Q+ EEA+ LF M G
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P+ TY +LTA ++ + + ++K ++ T +++D + G + EA
Sbjct: 397 VRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVDEA 451
Query: 570 YNFIENMPLEPDVVAWGSLLSA 591
+ D+VAW ++L+
Sbjct: 452 AKVFSGID-NKDIVAWSAMLAG 472
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 68/330 (20%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+ P EF ++ + L +P VHA+++K S + +L++ Y K + A K
Sbjct: 397 VRPNEFTYSVILTALPVISP---SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAK 453
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VF + K + +W+ +L+ YA+ G + A
Sbjct: 454 VFSGIDNKDIVAWSAMLAGYAQAGETEA-------------------------------A 482
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTA-LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
I++F E+ + V P +FT +S+L C A + GK+ H F +K+ L + V+++LL
Sbjct: 483 IKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLT 542
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK G A+ VF R K++ SWN SM
Sbjct: 543 MYAKKGHIESAEEVFKRQREKDLVSWN-------------------------------SM 571
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-T 307
I+GY+Q+G +AL +F M K +K D T +AC + ++ G++ ++R
Sbjct: 572 ISGYAQHGQAMKALDVFKEM-KKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 630
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+ T + ++ Y++ G +E A K+++
Sbjct: 631 KIAPTKEHNSCMVDLYSRAGQLEKAMKVID 660
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 272/719 (37%), Positives = 432/719 (60%), Gaps = 16/719 (2%)
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRM 132
P + ++++A A GRL A F+ +P RD+V ++ + A+ +
Sbjct: 88 PTRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSV 147
Query: 133 FVEMVQDQVL-PTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNM 189
F ++ L P ++ T+++++ + +L+A ++H V+K+G + ++V+N+L+ +
Sbjct: 148 FHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIAL 207
Query: 190 YAKVGDEMM---AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
Y K A+ V D M K+ +W +V ++ G ++ AR+ F+++ + V WN
Sbjct: 208 YMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 267
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MI+GY Q+G +A +F M+ + + D+FT S LSACAN GK +H IIR
Sbjct: 268 AMISGYVQSGMCADAFELFRRMVSEK-VPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 326
Query: 307 TEF----DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ +A PV NAL++ Y+K G + IA++I + + +V+++ T+L GYI G +
Sbjct: 327 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK--DVVSWNTILSGYIDSGCL 384
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +F + ++ ++W M+ GY GL++DA++LF M E KP +YT + ++
Sbjct: 385 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 444
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
L +L HG+Q+HA ++ G +S S NAL+TMY+K G +N AR VF L+ ++VSW
Sbjct: 445 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVF-LVMPNLDSVSW 503
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+MI AL QHG G EA++LF++M+ GI PD I+++ +LTAC H GLV++G Y+ MK
Sbjct: 504 NAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKR 563
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
I P H+A ++DLLGR+G + EA + I+ MP EP W ++LS CR + +++ G
Sbjct: 564 DFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGA 623
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
AA++L + P + G Y L N YS+ G+W DAA +RK M+ GVKK G SW+++ +K+
Sbjct: 624 YAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKI 683
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
HVF V D HP+ +Y + I ++++G+VPDT VLHD+E KE +L HSEKLA
Sbjct: 684 HVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLA 743
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
+ FGL+ P T+ ++KNLR+C DCH+A+ F+ K V REIVVRD RFHHFK G CSC
Sbjct: 744 VGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 254/529 (48%), Gaps = 54/529 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISY---AKKVFDEMPVKTLCSWNTILSAYAK 91
+H ++K G + + N+L+ Y K ++ A+KV DEMP K +W T++ Y +
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 244
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+G ++ A VF + + V W +I Y + G +A +F MV ++V +FT TSV
Sbjct: 245 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 304
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLS----GCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
L++C G GK VH +++ + + V N+L+ +Y+K G ++AK +FD M
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
LK+V SWN ++S +I SG LD A F M ++ ++W M++GY G +AL +F N
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLF-N 423
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
++ +KP +T A ++AC L LK G+Q+HA++++ F+A+ GNAL++ YAK G
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 483
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
V AR +F + + D V+W AM+
Sbjct: 484 AVN---------------------------------DARLVFLVMPNLDSVSWNAMISAL 510
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
Q+G ++A+ELF MV EG P+ + +L+ + +D G S R G +
Sbjct: 511 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPG 570
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE----EAIQLF 502
LI + ++G I AR + + + W +++ +G E A QLF
Sbjct: 571 EDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLF 630
Query: 503 ERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
RM+ P H TY+ + + G R +M++ +K P
Sbjct: 631 -RMI-----PQHDGTYILLSNTYSAAGRWVDAARVRKLMRD-RGVKKEP 672
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 173/361 (47%), Gaps = 24/361 (6%)
Query: 32 GKLVHARIIKCGLHL----SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
GK VH +II+ + ++ + N+L+ Y+K I AK++FD M +K + SWNTILS
Sbjct: 317 GKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILS 376
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
Y G LD A EVF +MP ++ +SW ++ Y G ++A+++F +M + V P +T
Sbjct: 377 GYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYT 436
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+A+C LG L G+++H+ +V+ G + N+LL MYAK G A+ VF M
Sbjct: 437 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP 496
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALG 263
+ SWN ++S G A FDQM I+ D +++ +++ + G E
Sbjct: 497 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH 556
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F +M +D + P + A + ++ + + I F+ T + A++S
Sbjct: 557 YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL---IKTMPFEPTPSIWEAILSGC 613
Query: 324 AKVGGVEIAQ-------KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
G +E +++ Q +Y+ L + Y G A R+ +RDR
Sbjct: 614 RTNGDMEFGAYAADQLFRMIPQHDGTYI------LLSNTYSAAGRWVDAARVRKLMRDRG 667
Query: 377 V 377
V
Sbjct: 668 V 668
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/756 (36%), Positives = 428/756 (56%), Gaps = 97/756 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +HA K G + ++ +L+N YAK I A F E V+ + WN +L AY
Sbjct: 366 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 425
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G LD +N+ R+F +M ++++P Q+T
Sbjct: 426 ---GLLD----------------------------DLRNSFRIFRQMQIEEIVPNQYTYP 454
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +C LGDL G+++HS ++KT V + L++MYAK+G K
Sbjct: 455 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG--------------K 500
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++W++++ + +DVV+W +MIAGY+Q +D +AL F ML
Sbjct: 501 LDTAWDILI-----------------RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
D ++ D+ L + +SACA L+ LK G+QIHA + F + P NAL++ Y++ G +
Sbjct: 544 -DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 602
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E SYL F+ D +AW A++ G++Q
Sbjct: 603 EE----------SYL-----------------------AFEQTEAGDNIAWNALVSGFQQ 629
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G N++A+ +F M REG NN+T + + +S A++ GKQ+HA ++G S V
Sbjct: 630 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 689
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI+MY+K G+I+ A + F + + E VSW ++I A ++HG G EA+ F++M+
Sbjct: 690 CNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHGFGSEALDSFDQMIHSN 748
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P+H+T VGVL+AC+H GLV++G Y+ M + + + P P H+ +VD+L RAGLL A
Sbjct: 749 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 808
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
FI+ MP++PD + W +LLSAC VHKN+++G+ AA LL +EP++S Y L NLY+
Sbjct: 809 KEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVS 868
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KW+ R+ MK GVKK G SW++++N +H F V D HP D I+ +
Sbjct: 869 KKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRA 928
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
E+G+V D S+L++++ + K+ ++ HSEKLAI+FGL+S P + +MKNLRVCNDCH
Sbjct: 929 SEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCH 988
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ IKF+ K+ +REI+VRDA RFHHF+ G CSC+DYW
Sbjct: 989 AWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 242/510 (47%), Gaps = 70/510 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y++ G +DLA VF+ + +D SW +I ++ AIR+F +M ++
Sbjct: 186 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 245
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + +SVL++C + L G+++H V+K G S V N+L+++Y +G
Sbjct: 246 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG-------- 297
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
N++ + HI F M +RD VT+N++I G SQ GY +A+
Sbjct: 298 ------------NLISAEHI-----------FSNMSQRDAVTYNTLINGLSQCGYGEKAM 334
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M D L+PD TLAS + AC+ L G+Q+HAY + F + + AL++
Sbjct: 335 ELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 393
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK +E A LD +++ +VV W
Sbjct: 394 YAKCADIETA--------------------LDYFLET-------------EVENVVLWNV 420
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
MLV Y +++ +FR M E PN YT ++L L L+ G+QIH+ +++
Sbjct: 421 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 480
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQL 501
+ V + LI MY+K G ++ A + LI + ++ VSWT+MI Q+ ++A+
Sbjct: 481 FQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 538
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +ML+ GI+ D + ++AC +++GQ+ + V ++V L
Sbjct: 539 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYS 597
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
R G ++E+Y E D +AW +L+S
Sbjct: 598 RCGKIEESYLAFEQTE-AGDNIAWNALVSG 626
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 159/618 (25%), Positives = 279/618 (45%), Gaps = 111/618 (17%)
Query: 19 LLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL+ LK+ G+ +H++I+K GL + L L +FY + A KVFDEMP +
Sbjct: 50 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 109
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
T+ +WN ++ A + +L EVF L FV MV
Sbjct: 110 TIFTWNKMIKELASR---NLIGEVFGL----------------------------FVRMV 138
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ V P + T + VL +C G ++ +++H+ ++ GL V N L+++Y++ G
Sbjct: 139 SENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF 197
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A+ VFDG+RLK+ SS W +MI+G S+N
Sbjct: 198 VDLARRVFDGLRLKDHSS-------------------------------WVAMISGLSKN 226
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+ EA+ +F +M + P + +S LSAC +E L++G+Q+H +++ F + V
Sbjct: 227 ECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 285
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+S Y +G + A+ I F ++ R
Sbjct: 286 CNALVSLYFHLGNLISAEHI---------------------------------FSNMSQR 312
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V + ++ G Q G + A+ELF+ M +G +P++ TL++++ S+ +L G+Q+H
Sbjct: 313 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 372
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A + G AS+ + AL+ +Y+K +I A F L + V W M+VA
Sbjct: 373 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYF-LETEVENVVLWNVMLVAYGLLDDL 431
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+ ++F +M I P+ TY +L C G +E G++ ++ + + + +
Sbjct: 432 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSV 490
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IE 612
++D+ + G L A++ + DVV+W +++ A N D + + +L I
Sbjct: 491 LIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMI-AGYTQYNFDDKALTTFRQMLDRGIR 548
Query: 613 PDNSGAYSALCNLYSSCG 630
D G L N S+C
Sbjct: 549 SDEVG----LTNAVSACA 562
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 251/568 (44%), Gaps = 105/568 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H ++K G ++ N+L++ Y ++ A+ +F M + ++NT+++ +
Sbjct: 266 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 325
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G Y E A+ +F M D + P T+ S
Sbjct: 326 QCG--------------------------YGE-----KAMELFKRMHLDGLEPDSNTLAS 354
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+A G L G+++H++ K G + + +LLN+YAK D A F ++N
Sbjct: 355 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 414
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V WNV++ + G LD R F +F M +
Sbjct: 415 VVLWNVML---VAYGLLDDLRNSFR----------------------------IFRQM-Q 442
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ P+++T S L C L L+LG+QIH+ II+T F V + LI YAK+G ++
Sbjct: 443 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 502
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A I +I F +DVV+WT M+ GY Q
Sbjct: 503 TAWDI----------LIRFA-----------------------GKDVVSWTTMIAGYTQY 529
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ A+ FR M+ G + + L+ +S + L +L G+QIHA A SG +S L
Sbjct: 530 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 589
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+T+YS+ G I + F + ++W +++ Q G EEA+++F RM GI
Sbjct: 590 NALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 648
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
++ T+ + A + ++QG++ + ++ T A ++ + + G + +A
Sbjct: 649 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-LISMYAKCGSISDA- 706
Query: 571 NFIENMPLE---PDVVAWGSLLSACRVH 595
E LE + V+W ++++A H
Sbjct: 707 ---EKQFLEVSTKNEVSWNAIINAYSKH 731
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 234/536 (43%), Gaps = 106/536 (19%)
Query: 141 VLPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGL--SGCVNVTNSLLNMYAKVGDEM 197
+ P T+ +L C G L G+K+HS ++K GL +GC
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGC------------------ 81
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+++ +FD ++ G L A FD+M ER + TWN MI +
Sbjct: 82 LSEKLFD---------------FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 126
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLEKLKLGKQIHAYIIRTEFDATGPVG 316
E G+F M+ ++ + P++ T + L AC + +QIHA I+ + V
Sbjct: 127 IGEVFGLFVRMVSEN-VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 185
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI Y++ G V++A RR+FD LR +D
Sbjct: 186 NPLIDLYSRNGFVDLA---------------------------------RRVFDGLRLKD 212
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+W AM+ G +N +A+ LF M G P Y S++LS + SL+ G+Q+H
Sbjct: 213 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 272
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
L+ G +S V NAL+++Y GN+ +A +F+ + R + V++ ++I L+Q G GE
Sbjct: 273 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGE 331
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY------------------- 537
+A++LF+RM G++PD T ++ AC+ G + +GQ+ +
Sbjct: 332 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 391
Query: 538 NMMKNVHKIKPTPSHFAS-----------MVDLLGRAGLLQEAYNFIENMPLE---PDVV 583
N+ I+ +F M+ G L+ ++ M +E P+
Sbjct: 392 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 451
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCGKWEDAANI 638
+ S+L C +L+LG+ +++ N+ S L ++Y+ GK + A +I
Sbjct: 452 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 507
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 402 SMVREGPKPNNYTLSAMLS-VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
S+ G +PN+ TL +L + SLD G+++H+ L+ G S+ +S L Y
Sbjct: 34 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 93
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G++ A +VF+ + R +W MI LA L E LF RM+ + P+ T+ GV
Sbjct: 94 GDLYGAFKVFDEMPERT-IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 152
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHK------IKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
L AC G + +++++ +H ++ + ++DL R G + A +
Sbjct: 153 LEACRGGSVA------FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 206
Query: 575 NMPLEPDVVAWGSLLSA 591
+ L+ D +W +++S
Sbjct: 207 GLRLK-DHSSWVAMISG 222
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/756 (36%), Positives = 428/756 (56%), Gaps = 97/756 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +HA K G + ++ +L+N YAK I A F E V+ + WN +L AY
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G LD +N+ R+F +M ++++P Q+T
Sbjct: 466 ---GLLD----------------------------DLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +C LGDL G+++HS ++KT V + L++MYAK+G K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG--------------K 540
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++W++++ + +DVV+W +MIAGY+Q +D +AL F ML
Sbjct: 541 LDTAWDILI-----------------RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
D ++ D+ L + +SACA L+ LK G+QIHA + F + P NAL++ Y++ G +
Sbjct: 584 -DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E SYL F+ D +AW A++ G++Q
Sbjct: 643 EE----------SYL-----------------------AFEQTEAGDNIAWNALVSGFQQ 669
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G N++A+ +F M REG NN+T + + +S A++ GKQ+HA ++G S V
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 729
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI+MY+K G+I+ A + F + + E VSW ++I A ++HG G EA+ F++M+
Sbjct: 730 CNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P+H+T VGVL+AC+H GLV++G Y+ M + + + P P H+ +VD+L RAGLL A
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
FI+ MP++PD + W +LLSAC VHKN+++G+ AA LL +EP++S Y L NLY+
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVS 908
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KW+ R+ MK GVKK G SW++++N +H F V D HP D I+ +
Sbjct: 909 KKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRA 968
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
E+G+V D S+L++++ + K+ ++ HSEKLAI+FGL+S P + +MKNLRVCNDCH
Sbjct: 969 SEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCH 1028
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ IKF+ K+ +REI+VRDA RFHHF+ G CSC+DYW
Sbjct: 1029 AWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 243/510 (47%), Gaps = 70/510 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y++ G +DLA VF+ + +D SW +I ++ AIR+F +M ++
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + +SVL++C + L G+++H V+K G S V N+L+++Y +G
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG-------- 337
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
N++ + HI F M +RD VT+N++I G SQ GY +A+
Sbjct: 338 ------------NLISAEHI-----------FSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M D L+PD TLAS + AC+ L G+Q+HAY + F + + AL++
Sbjct: 375 ELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK +E A ++ + NV+ + +L Y + D+ + RIF ++ ++V
Sbjct: 434 YAKCADIETALDYFLETEVE--NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV---- 487
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
PN YT ++L L L+ G+QIH+ +++
Sbjct: 488 ---------------------------PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQL 501
+ V + LI MY+K G ++ A + LI + ++ VSWT+MI Q+ ++A+
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +ML+ GI+ D + ++AC +++GQ+ + V ++V L
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYS 637
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
R G ++E+Y E D +AW +L+S
Sbjct: 638 RCGKIEESYLAFEQTE-AGDNIAWNALVSG 666
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 159/618 (25%), Positives = 279/618 (45%), Gaps = 111/618 (17%)
Query: 19 LLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL+ LK+ G+ +H++I+K GL + L L +FY + A KVFDEMP +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
T+ +WN ++ A + +L EVF L FV MV
Sbjct: 150 TIFTWNKMIKELASR---NLIGEVFGL----------------------------FVRMV 178
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ V P + T + VL +C G ++ +++H+ ++ GL V N L+++Y++ G
Sbjct: 179 SENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF 237
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A+ VFDG+RLK+ SS W +MI+G S+N
Sbjct: 238 VDLARRVFDGLRLKDHSS-------------------------------WVAMISGLSKN 266
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+ EA+ +F +M + P + +S LSAC +E L++G+Q+H +++ F + V
Sbjct: 267 ECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+S Y +G + A+ I F ++ R
Sbjct: 326 CNALVSLYFHLGNLISAEHI---------------------------------FSNMSQR 352
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V + ++ G Q G + A+ELF+ M +G +P++ TL++++ S+ +L G+Q+H
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A + G AS+ + AL+ +Y+K +I A F L + V W M+VA
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYF-LETEVENVVLWNVMLVAYGLLDDL 471
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+ ++F +M I P+ TY +L C G +E G++ ++ + + + +
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSV 530
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IE 612
++D+ + G L A++ + DVV+W +++ A N D + + +L I
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMI-AGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 613 PDNSGAYSALCNLYSSCG 630
D G L N S+C
Sbjct: 589 SDEVG----LTNAVSACA 602
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 251/568 (44%), Gaps = 105/568 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H ++K G ++ N+L++ Y ++ A+ +F M + ++NT+++ +
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G Y E A+ +F M D + P T+ S
Sbjct: 366 QCG--------------------------YGE-----KAMELFKRMHLDGLEPDSNTLAS 394
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+A G L G+++H++ K G + + +LLN+YAK D A F ++N
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V WNV++ + G LD R F +F M +
Sbjct: 455 VVLWNVML---VAYGLLDDLRNSFR----------------------------IFRQM-Q 482
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ P+++T S L C L L+LG+QIH+ II+T F V + LI YAK+G ++
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A I +I F +DVV+WT M+ GY Q
Sbjct: 543 TAWDI----------LIRFA-----------------------GKDVVSWTTMIAGYTQY 569
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ A+ FR M+ G + + L+ +S + L +L G+QIHA A SG +S L
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+T+YS+ G I + F + ++W +++ Q G EEA+++F RM GI
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
++ T+ + A + ++QG++ + ++ T A ++ + + G + +A
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-LISMYAKCGSISDA- 746
Query: 571 NFIENMPLE---PDVVAWGSLLSACRVH 595
E LE + V+W ++++A H
Sbjct: 747 ---EKQFLEVSTKNEVSWNAIINAYSKH 771
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 234/536 (43%), Gaps = 106/536 (19%)
Query: 141 VLPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGL--SGCVNVTNSLLNMYAKVGDEM 197
+ P T+ +L C G L G+K+HS ++K GL +GC
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGC------------------ 121
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+++ +FD ++ G L A FD+M ER + TWN MI +
Sbjct: 122 LSEKLFD---------------FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 166
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLEKLKLGKQIHAYIIRTEFDATGPVG 316
E G+F M+ ++ + P++ T + L AC + +QIHA I+ + V
Sbjct: 167 IGEVFGLFVRMVSEN-VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI Y++ G V++A RR+FD LR +D
Sbjct: 226 NPLIDLYSRNGFVDLA---------------------------------RRVFDGLRLKD 252
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+W AM+ G +N +A+ LF M G P Y S++LS + SL+ G+Q+H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
L+ G +S V NAL+++Y GN+ +A +F+ + R + V++ ++I L+Q G GE
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGE 371
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY------------------- 537
+A++LF+RM G++PD T ++ AC+ G + +GQ+ +
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 538 NMMKNVHKIKPTPSHFAS-----------MVDLLGRAGLLQEAYNFIENMPLE---PDVV 583
N+ I+ +F M+ G L+ ++ M +E P+
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCGKWEDAANI 638
+ S+L C +L+LG+ +++ N+ S L ++Y+ GK + A +I
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 51/284 (17%)
Query: 402 SMVREGPKPNNYTLSAMLS-VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
S+ G +PN+ TL +L + SLD G+++H+ L+ G S+ +S L Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G++ A +VF+ + R +W MI LA L E LF RM+ + P+ T+ GV
Sbjct: 134 GDLYGAFKVFDEMPERT-IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHK------IKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
L AC G + +++++ +H ++ + ++DL R G + A +
Sbjct: 193 LEACRGGSVA------FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 575 NMPLE----------------------------------PDVVAWGSLLSACRVHKNLDL 600
+ L+ P A+ S+LSAC+ ++L++
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 601 GKIAAEKLLLIEPDNSGAY--SALCNLYSSCGKWEDAANIRKSM 642
G+ L+L +S Y +AL +LY G A +I +M
Sbjct: 307 GE-QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/820 (33%), Positives = 459/820 (55%), Gaps = 102/820 (12%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V A IIK G + + + N L+ + + ++ A+K+FDEMP K + S NT++ Y K G
Sbjct: 88 VDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGN 147
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A +F+ M R +V+WT +I Y + +F+ A +F+EM + + P ++ ++L+
Sbjct: 148 LSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSG 207
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
T ++ ++VHS V+K G + V+NSLL+ Y K
Sbjct: 208 FTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCK---------------------- 245
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+ L LA F+ + ERD VT+N+++ GYS+ G++ EA+ +F M ++
Sbjct: 246 ---------TRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKM-QEVGY 295
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF------------------------- 309
+P +FT A+ L+A L+ ++ G+Q+H ++++ F
Sbjct: 296 RPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASK 355
Query: 310 ------DATGPVGNALISCYAKVGGV---------------------------------- 329
+ G N L++CYA G V
Sbjct: 356 LFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLN 415
Query: 330 -EIAQKIVEQSGIS--YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+I ++I Q+ ++ ++ +L+D Y K G+ G A RIF L + V WTAM+
Sbjct: 416 LDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISS 475
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q GL++D ++LF M R + T ++++ +SLASL GKQ+H+ + SG S+
Sbjct: 476 YVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISN 535
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ +AL+ MY+K G+I A ++F + R +VSW ++I A AQ+G G+ ++LFE M+
Sbjct: 536 VFSGSALVDMYAKCGSIKDALQMFQEMPVRN-SVSWNALISAYAQNGDGDCTLRLFEEMV 594
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G++PD ++ + +L AC+H GLVE+G +Y++ M ++K+ P H+AS +D+L R G
Sbjct: 595 RSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRF 654
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSALCNL 625
EA + MP EPD + W S+L++C +HKN +L K AA +L ++ ++ Y + N+
Sbjct: 655 DEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNI 714
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y++ G+W++ ++K+M+ GVKK +SWV+I++K HVF D HPQ I K+ ++
Sbjct: 715 YAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDEL 774
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
+++ + G+ PD++ LH+V+E+VK + L++HSE++AIAF LISTPE + + +MKNLR C
Sbjct: 775 EEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRAC 834
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+AIK I K+V REI VRD++RFHHF+ G C+CRDYW
Sbjct: 835 TDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 75/349 (21%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P EF +A +L + ++ + G+ VH ++KC +VF+ N+L++FY+K + + A K+
Sbjct: 297 PTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKL 356
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTI---------- 116
F EMP S+N +++ YA GR+ + E+F + +R + + T+
Sbjct: 357 FYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNL 416
Query: 117 ----------IVT---------------YNEIGRFKNAIRMF------------------ 133
IVT Y + G F A R+F
Sbjct: 417 DIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSY 476
Query: 134 -------------VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
VEM + ++ T S++ +C +L L+ GK++HS ++ +G V
Sbjct: 477 VQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNV 536
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI-- 238
++L++MYAK G A +F M ++N SWN ++S + +G D F++M+
Sbjct: 537 FSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRS 596
Query: 239 --ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
+ D V+ S++ S G E L F +M + L P K AST+
Sbjct: 597 GLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTI 645
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 294/781 (37%), Positives = 437/781 (55%), Gaps = 75/781 (9%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L+ + +LL++ + R+ GK++HA K + S +L N Y+K S+ A+ F
Sbjct: 9 LQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFH 68
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
+ S+NT+++AYAK + +A VF+ +P D VS+ T+I Y + G +R+
Sbjct: 69 LTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRL 128
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F E+ + ++ FT++ V+ +C D+ +++H FVV G +V N++L Y++
Sbjct: 129 FEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSR 186
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE---RDVVTWNSMI 249
G L AR F +M E RD V+WN+MI
Sbjct: 187 -------------------------------KGFLSEARRVFREMGEGGGRDEVSWNAMI 215
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
Q+ EA+G+F M++ LK D FT+AS L+A ++ L G+Q H +I++ F
Sbjct: 216 VACGQHREGMEAVGLFREMVR-RGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGF 274
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
VG+ LI Y+K G +VE R++F
Sbjct: 275 HGNSHVGSGLIDLYSKCAG-----SMVE---------------------------CRKVF 302
Query: 370 DSLRDRDVVAWTAMLVGYE-QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
+ + D+V W M+ G+ L++D + FR M R G +P++ + + S S+L+S
Sbjct: 303 EEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSP 362
Query: 429 DHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
GKQ+HA A++S + +SV+NAL+ MYSK GN++ ARRVF+ + TVS SMI
Sbjct: 363 SLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP-EHNTVSLNSMIA 421
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQHG+ E+++LFE MLE I P+ IT++ VL+AC H G VE+GQ+Y+NMMK I+
Sbjct: 422 GYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIE 481
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H++ M+DLLGRAG L+EA IE MP P + W +LL ACR H N++L AA +
Sbjct: 482 PEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANE 541
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L +EP N+ Y L N+Y+S +WE+AA +++ M+ GVKK G SW++I KVHVF
Sbjct: 542 FLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVA 601
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL---HDVEEDVKEQMLRHHSEKLAIA 724
ED HP I+ M K+ ++K+ G+VPD L +VE D +E+ L +HSEKLA+A
Sbjct: 602 EDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVA 661
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
FGLIST E + ++KNLR+C DCH+A+K I L REI VRD RFH FK+G CSCRDY
Sbjct: 662 FGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDY 721
Query: 785 W 785
W
Sbjct: 722 W 722
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 299/781 (38%), Positives = 439/781 (56%), Gaps = 63/781 (8%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP-- 75
H+L++ + + G H I G +VF+ N+L+ Y++ S+ A +FDE+
Sbjct: 122 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 181
Query: 76 -VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+ + SWN+I+SA+ K A ++F+ M T+IV + I
Sbjct: 182 GIDDVISWNSIVSAHVKSSNAWTALDLFSKM---------TLIVHEKPTNERSDII---- 228
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
++ ++L +C +L + K+VH ++ G V V N+L++ YAK G
Sbjct: 229 ------------SIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCG 276
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
A VF+ M K+V SWN +V+ + SG A F M I D+VTW ++IA
Sbjct: 277 LMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIA 336
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GYSQ G EAL +F M+ SL P+ T+ S LSACA+L G +IHAY ++
Sbjct: 337 GYSQRGCSHEALNVFRQMIFSGSL-PNCVTIISVLSACASLGAFSQGMEIHAYSLK---- 391
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
N L++ GG + +++ + L+D Y K AR IFD
Sbjct: 392 ------NCLLTLDNDFGGED-------------EDLMVYNALIDMYSKCRSFKAARSIFD 432
Query: 371 S--LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSSLA 426
L +R+VV WT M+ G+ Q G + DA++LF M+ E G PN YT+S +L + LA
Sbjct: 433 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 492
Query: 427 SLDHGKQIHASALRSGE--ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++ GKQIHA LR + +S+ V+N LI MYSK G+++ AR VF+ + ++ +SWTS
Sbjct: 493 AIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTS 551
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
M+ HG G EA+ +F++M + G PD IT++ VL AC+H G+V+QG Y++ M +
Sbjct: 552 MMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADY 611
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+A +DLL R G L +A+ +++MP+EP V W +LLSACRVH N++L + A
Sbjct: 612 GLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHA 671
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
KL+ + +N G+Y+ + N+Y++ G+W+D A IR MK G+KK G SWVQ Q
Sbjct: 672 LNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS 731
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V D HP IY + + D IK MG+VP+T LHDV+E+ K +L HSEKLA+A
Sbjct: 732 FFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALA 791
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+GL++T +RI KNLRVC DCHSA +I K+VD EIVVRD +RFHHFK G CSC Y
Sbjct: 792 YGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 851
Query: 785 W 785
W
Sbjct: 852 W 852
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 254/537 (47%), Gaps = 60/537 (11%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++++Y G D A V + +V W +I + + GR +AI + M++
Sbjct: 57 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT+ VL +C L G H + G V + N+L+ MY++ G A +FD
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176
Query: 205 GMR---LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+ + +V SWN +VS H+ S W A
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSN-----------------AWT--------------A 205
Query: 262 LGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
L +F+ M K ++ + D ++ + L AC +L+ + K++H IR VG
Sbjct: 206 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG 265
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR- 375
NALI YAK G +E A K+ + + +V+++ ++ GY + G+ A +F ++R
Sbjct: 266 NALIDAYAKCGLMENAVKVFNM--MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN 323
Query: 376 ---DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
D+V WTA++ GY Q G + +A+ +FR M+ G PN T+ ++LS +SL + G
Sbjct: 324 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGM 383
Query: 433 QIHASALRS----------GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE-TVS 481
+IHA +L++ GE L V NALI MYSK + AAR +F+ I + V+
Sbjct: 384 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 443
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
WT MI AQ+G +A++LF M+ G+ P+ T +L AC H + G++ +
Sbjct: 444 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 503
Query: 540 MKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ H+ + A+ ++++ + G + A + ++M + ++W S+++ +H
Sbjct: 504 VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 559
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 131/581 (22%), Positives = 235/581 (40%), Gaps = 147/581 (25%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
VV+ ++ G D A +++ V WN +I + + G A+ + ML+ + +
Sbjct: 57 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR-AGTRL 115
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI- 335
D FTL L AC L + G H I F++ + NAL++ Y++ G +E A I
Sbjct: 116 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 175
Query: 336 --VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ Q GI +VI++ +++ ++K + AWTA+
Sbjct: 176 DEITQRGID--DVISWNSIVSAHVKSSN-----------------AWTAL---------- 206
Query: 394 KDAVELFRSM---VREGP---KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+LF M V E P + + ++ +L SL ++ K++H +A+R+G +
Sbjct: 207 ----DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 262
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQ------------------------------ 477
V NALI Y+K G + A +VFN++ ++
Sbjct: 263 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 322
Query: 478 ----ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ V+WT++I +Q G EA+ +F +M+ G P+ +T + VL+AC G QG
Sbjct: 323 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382
Query: 534 QRYYNM-MKNVHKIKPTPSHFA----------SMVDLLGRAGLLQEAYNFIENMPLEP-D 581
+ +KN + + F +++D+ + + A + +++PLE +
Sbjct: 383 MEIHAYSLKNC--LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 440
Query: 582 VVAW-------------------------------------GSLLSACRVHKNLDLGK-I 603
VV W +L AC + +GK I
Sbjct: 441 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 500
Query: 604 AAEKLLLIEPDNSGAYSALC--NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
A L + D+S + A C N+YS CG + A ++ SM + SW +
Sbjct: 501 HAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM-----SQKSAISWTSMMTG 555
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ G ++ I+D++++ GFVPD + L
Sbjct: 556 YGMHGRG-----------SEALDIFDKMRKAGFVPDDITFL 585
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 139/310 (44%), Gaps = 19/310 (6%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T ++ Y+ G A + + + V W ++ + + G A+ + M+R G +
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
+++TL +L L S G H +G S++ + NAL+ MYS+ G++ A +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 470 FNLIHWR--QETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKP-----DHITYVGVL 521
F+ I R + +SW S++ A + A+ LF +M L + KP D I+ V +L
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234
Query: 522 TACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
AC V Q + + N ++N + + +++D + GL++ A M +
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN--ALIDAYAKCGLMENAVKVFNMMEFK- 291
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG----AYSALCNLYSSCGKWEDAA 636
DVV+W ++++ N K A E + +N ++A+ YS G +A
Sbjct: 292 DVVSWNAMVAGYSQSGNF---KAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEAL 348
Query: 637 NIRKSMKYVG 646
N+ + M + G
Sbjct: 349 NVFRQMIFSG 358
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/737 (37%), Positives = 426/737 (57%), Gaps = 47/737 (6%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
++ +L++ + ++ +A K F + T+ N++L YAK +D A E+F MP RD
Sbjct: 196 VQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERD 255
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
VSW +I ++ GR + A+ M V+M V P T TS L +C L L GK++H
Sbjct: 256 VVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHV 315
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
V++ V ++++ +YAK G AK VF +R
Sbjct: 316 QVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLR---------------------- 353
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
+R+ V+W +I G+ Q G E++ +F N ++ + D+F LA+ +S C
Sbjct: 354 ---------DRNSVSWTVLIGGFLQYGCFSESVELF-NQMRAELMAVDQFALATLISGCC 403
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
N + LG Q+H+ +++ V N+LIS YAK G ++ A+ I + ++ +++++
Sbjct: 404 NTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF--NFMAERDIVSW 461
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T ++ Y ++G+I AR FD + R+V+ W AML Y Q+G +D ++++ M+ E
Sbjct: 462 TGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDV 521
Query: 410 -PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
P+ T + + + + G QI ++ G SV NA+ITMYSK G I+ AR+
Sbjct: 522 IPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARK 581
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
F+ + R++ VSW +MI +QHG+G++AI++F+ +L G KPD+I+YV VL+ C+H G
Sbjct: 582 AFDFLS-RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSG 640
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LVE+G+ Y++MMK H I P HF+ MVDLLGRAG L EA N I+ MP++P WG+L
Sbjct: 641 LVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGAL 700
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC+ H N DL ++AA+ L ++ SG Y L +Y+ GK +D+A +RK M+ G+K
Sbjct: 701 LSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIK 760
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K+ G+SW+++ N+VHVF ED HPQ AI K+ ++ ++I +G+V E
Sbjct: 761 KSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVR---------TES 811
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
+ ++ HHSEKLA+AFG++S P + IMKNLR+C+DCH+ IK I + DRE V+RD
Sbjct: 812 PRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDG 869
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHFK G CSC DYW
Sbjct: 870 VRFHHFKGGSCSCMDYW 886
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 295/618 (47%), Gaps = 79/618 (12%)
Query: 26 SRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF-DEMPVKTLCSWN 83
+R+ G + +H+R+I GL VFL+N+L++ Y ++S A+ + DE+ + + N
Sbjct: 37 ARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHN 96
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVL 142
+++ YAK G L A E+F MP RD SW TI+ Y + G+F NA+ +FV M Q L
Sbjct: 97 IMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSL 156
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT V+ SC ALG ++ + K +V +L++M + G A
Sbjct: 157 PNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQ 216
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F ++ + N ++ + S +D A F M ERDVV+WN +I+ S++G EAL
Sbjct: 217 FSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREAL 276
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
M +M ++PD T S+L+ACA L L+ GKQ+H +IR V +A++
Sbjct: 277 DMVVDM-HGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVEL 335
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+++ F SLRDR+ V+WT
Sbjct: 336 YAKCGCFKEAKRV---------------------------------FSSLRDRNSVSWTV 362
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ Q G ++VELF M E + + L+ ++S + + G Q+H+ L+SG
Sbjct: 363 LIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSG 422
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA------------ 490
++ VSN+LI+MY+K GN+ A +FN + R + VSWT MI A +
Sbjct: 423 HTRAVVVSNSLISMYAKCGNLQNAELIFNFMAER-DIVSWTGMITAYSQVGNIAKAREFF 481
Query: 491 -------------------QHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLV 530
QHG E+ ++++ ML E + PD +TYV + C G
Sbjct: 482 DDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGAN 541
Query: 531 EQGQRYYNMMKNVHKIKPTP--SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+ G + V I T + +M GR ++A++F+ D+V+W ++
Sbjct: 542 KLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLS----RKDLVSWNAM 597
Query: 589 LSACRVHKNLDLGKIAAE 606
++ H +GK A E
Sbjct: 598 ITGYSQHG---MGKQAIE 612
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 247/499 (49%), Gaps = 15/499 (3%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF-DGM 206
+ L SC A L+ + +HS ++ GL+ V + N+LL+ Y G A+ + D +
Sbjct: 28 LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
NV + N++++ + G L A F +M RDV +WN++++GY Q+G AL +F
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+M + P+ FT + +C L ++ Q+ + + + V AL+ +
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G ++ A K + S I +I ++L GY K + A IF S+ +RDVV+W ++
Sbjct: 208 GAMDFASK--QFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISA 265
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
++G ++A+++ M +G +P++ T ++ L+ + L+SL+ GKQ+H +R+
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHID 325
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V++A++ +Y+K G A+RVF+ + R +VSWT +I Q+G E+++LF +M
Sbjct: 326 PYVASAMVELYAKCGCFKEAKRVFSSLRDRN-SVSWTVLIGGFLQYGCFSESVELFNQMR 384
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGL 565
+ D +++ C + + G + +++ +K+ H S+ S++ + + G
Sbjct: 385 AELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN--SLISMYAKCGN 442
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSALC 623
LQ A I N E D+V+W +++A +G IA + + N ++A+
Sbjct: 443 LQNA-ELIFNFMAERDIVSWTGMITAYS-----QVGNIAKAREFFDDMSTRNVITWNAML 496
Query: 624 NLYSSCGKWEDAANIRKSM 642
Y G ED + M
Sbjct: 497 GAYIQHGAEEDGLKMYSDM 515
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 141/283 (49%), Gaps = 33/283 (11%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A L+ + + +G +H+ +K G +V + NSL++ YAK ++ A+ +F+ M
Sbjct: 396 ATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAE 455
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ + SW +++AY++ G + A E F+ M R+ ++W ++ Y + G ++ ++M+ +M
Sbjct: 456 RDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDM 515
Query: 137 VQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ ++ V+P T ++ C +G G ++ VK GL +V N+++ MY+K G
Sbjct: 516 LTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGR 575
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ FD + K++ SW N+MI GYSQ+
Sbjct: 576 ISEARKAFDFLSRKDLVSW-------------------------------NAMITGYSQH 604
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
G +A+ +F ++L + KPD + + LS C++ ++ GK
Sbjct: 605 GMGKQAIEIFDDILNKGA-KPDYISYVAVLSGCSHSGLVEEGK 646
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/771 (36%), Positives = 427/771 (55%), Gaps = 100/771 (12%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
AH++Q+ K++ GK +HA +I G FL N L+N Y+K
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC--------------- 53
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
G LD A ++F+ MP R+ VSWT +I ++ +F AIR F M
Sbjct: 54 ----------------GELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGM 97
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+PTQF +S + +C +LG + GK++H +K G+ + V ++L +MY+K G
Sbjct: 98 RICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCG-- 155
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A+FD ++ F++M +D V+W +MI GYS+ G
Sbjct: 156 ----AMFDACKV-------------------------FEEMPCKDEVSWTAMIDGYSKIG 186
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
EAL F M+ D + D+ L STL AC L+ K G+ +H+ +++ F++ VG
Sbjct: 187 EFEEALLAFKKMI-DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF--DSLRD 374
NAL D Y K GD+ A +F DS
Sbjct: 246 NALT---------------------------------DMYSKAGDMESASNVFGIDS-EC 271
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
R+VV++T ++ GY + + + +F + R+G +PN +T S+++ ++ A+L+ G Q+
Sbjct: 272 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 331
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA ++ VS+ L+ MY K G + A + F+ I E ++W S++ QHGL
Sbjct: 332 HAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE-IAWNSLVSVFGQHGL 390
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G++AI+ FERM++ G+KP+ IT++ +LT C+H GLVE+G Y+ M + + P H++
Sbjct: 391 GKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYS 450
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
++DLLGRAG L+EA FI MP EP+ W S L ACR+H + ++GK+AAEKL+ +EP
Sbjct: 451 CVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPK 510
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
NSGA L N+Y++ +WED ++R M+ VKK G+SWV + K HVFG EDW H +
Sbjct: 511 NSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXR 570
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+ AIY K+ + D+IK G+VP T SV D+++ +KE++L HSE++A+AF LIS P
Sbjct: 571 KSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGK 630
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + KNLRVC DCHSAIKFI K+ R+I+VRD +RFHHF G CSC DYW
Sbjct: 631 PIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 81/406 (19%)
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML+D++ LA + A ++L+ GKQ+HA +I + + N L++ Y+K
Sbjct: 1 MLRDTN------ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC- 53
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
G++ A ++FD++ R++V+WTAM+ G
Sbjct: 54 --------------------------------GELDHALKLFDTMPQRNLVSWTAMISGL 81
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QN +A+ F M G P + S+ + +SL S++ GKQ+H AL+ G S L
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V + L MYSK G + A +VF + + E VSWT+MI ++ G EEA+ F++M++
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDE-VSWTAMIDGYSKIGEFEEALLAFKKMID 200
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGL 565
+ D L AC G ++ + ++ +V K+ F ++ D+ +AG
Sbjct: 201 EEVTIDQHVLCSTLGAC---GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGD 257
Query: 566 LQEAYN---------------------------------FIE--NMPLEPDVVAWGSLLS 590
++ A N F+E +EP+ + SL+
Sbjct: 258 MESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIK 317
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA-LCNLYSSCGKWEDA 635
AC L+ G +++ I D S+ L ++Y CG E A
Sbjct: 318 ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHA 363
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV----- 70
Y L+ +++ G V + + G+ + F +SL+ A ++ ++
Sbjct: 277 YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVM 336
Query: 71 ---FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
FDE P + + ++ Y K G L+ A + F+ + + ++W +++ + + G K
Sbjct: 337 KINFDEDPFVS----SILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGK 392
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
+AI+ F MV V P T S+L C+ G + G
Sbjct: 393 DAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/827 (34%), Positives = 456/827 (55%), Gaps = 142/827 (17%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH + +K GL V + SL++ Y KTE+++ ++VFDEM
Sbjct: 111 LGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMG--------------- 155
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
R+ VSWT+++ Y+ G + +F +M + VLP ++TV++
Sbjct: 156 ----------------ERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVST 199
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM--------------------- 189
V+A+ G + G +VH+ VVK G + V NSL+++
Sbjct: 200 VIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRD 259
Query: 190 ----------YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS--------------- 224
Y + G ++ +F+ M+L V ++ + I S
Sbjct: 260 WVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQC 319
Query: 225 ------------------------GRLDLARAQFDQMIE-RDVVTWNSMIAGYSQNGYDF 259
+D A + F M E ++VV+W +MI+G QNG +
Sbjct: 320 KALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGND 379
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+A+ +F+ M ++ +KP+ FT ++ L+ + ++HA +I+T ++ + VG
Sbjct: 380 QAVNLFSQMRREG-VKPNHFTYSAILTVHYPV----FVSEMHAEVIKTNYERSSSVG--- 431
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
T LLD Y+K+G+ A ++F+ + +D++A
Sbjct: 432 ------------------------------TALLDAYVKLGNTIDAVKVFEIIEAKDLMA 461
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASA 438
W+AML GY Q G ++A +LF +++EG KPN +T S+++ + +S A+ + GKQ HA A
Sbjct: 462 WSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYA 521
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
++ ++L VS+AL+TMY+K GNI++A VF R + VSW SMI +QHG ++A
Sbjct: 522 IKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKER-DLVSWNSMISGYSQHGQAKKA 580
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+++F+ M + + D +T++GV+TACTH GLVE+GQ+Y+N M N H I PT H++ M+D
Sbjct: 581 LEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMID 640
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
L RAG+L++A I MP P W +LL A RVH+N++LG++AAEKL+ ++P++S A
Sbjct: 641 LYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAA 700
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N+Y++ G W++ N+RK M VKK G+SW++++NK + F D HP + I
Sbjct: 701 YVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQI 760
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y+K++++ +K+ G+ PDT +V HD+E++ KE +L HHSE+LAIAFGLI+TP ++I
Sbjct: 761 YSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQI 820
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLRVC DCH+ K + + R IVVRD+ RFHHFK GLCSC DYW
Sbjct: 821 VKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 204/428 (47%), Gaps = 67/428 (15%)
Query: 97 LACEVFNLMPNRDSV--SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+A +F+ +P+R + ++ +Y+ + K A+ +FV ++ + P + T++ V
Sbjct: 43 IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNI 102
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C D G++VH VK GL V+V SL++MY K + + VFD M +N
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN---- 158
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
VV+W S++AGYS NG +F M + L
Sbjct: 159 ---------------------------VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
P+++T+++ ++A N + +G Q+HA +++ F+ PV N+LIS Y+++G +
Sbjct: 192 -PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLR---- 246
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
AR +FD + RD V W +M+ GY +NG +
Sbjct: 247 -----------------------------DARDVFDKMEIRDWVTWNSMIAGYVRNGQDL 277
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+ E+F M G KP + T ++++ +SL L K + AL+SG + V AL+
Sbjct: 278 EVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALM 337
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
SK ++ A +F+L+ + VSWT+MI Q+G ++A+ LF +M G+KP+H
Sbjct: 338 VALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNH 397
Query: 515 ITYVGVLT 522
TY +LT
Sbjct: 398 FTYSAILT 405
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 115/229 (50%), Gaps = 5/229 (2%)
Query: 365 ARRIFDSLRDRDVV--AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +FD + R +L Y ++ K+A+ LF S++ +P+ TLS + ++
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ G+Q+H ++ G +SV +L+ MY K N+N RRVF+ + R VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN-VVSW 162
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
TS++ + +GL +LF +M G+ P+ T V+ A + G+V G + + M+
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
H + F S++ L R G+L++A + + M + D V W S+++
Sbjct: 223 -HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIAG 269
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 286/744 (38%), Positives = 435/744 (58%), Gaps = 93/744 (12%)
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
Y+ +V D+ KT + N +++ YAK GR+D + +F +RD VSW T+I ++++ R
Sbjct: 222 YSLRVGDQ---KTFTN-NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 277
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTN 184
F A+ F MV + V T+ SVL +C+ L L GK++H++V++ L V +
Sbjct: 278 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGS 337
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L++MY + VFD HI R++L
Sbjct: 338 ALVDMYCNCRQVESGRRVFD----------------HILGRRIEL--------------- 366
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
WN+MI+GY++NG D +AL +F M+K + L P+ T+AS + AC + E + IH Y
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
++ F V NAL+ Y+++G ++I++
Sbjct: 427 VKLGFKEDRYVQNALMDMYSRMGKMDISET------------------------------ 456
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR----------------EGP 408
IFDS+ RD V+W M+ GY +G +A+ L M R GP
Sbjct: 457 ---IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGP 513
Query: 409 -KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
KPN TL +L ++LA++ GK+IHA A+R+ AS ++V +AL+ MY+K G +N +R
Sbjct: 514 YKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSR 573
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-ELG----IKPDHITYVGVLT 522
RVFN + + ++W +I+A HG GEEA++LF+ M+ E G KP+ +T++ V
Sbjct: 574 RVFNEMP-NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFA 632
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
AC+H GL+ +G + MK+ H ++PT H+A +VDLLGRAG L+EAY + MP E D
Sbjct: 633 ACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDK 692
Query: 583 V-AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
V AW SLL ACR+H+N++LG++AA+ LL +EP+ + Y L N+YSS G W A +RK+
Sbjct: 693 VGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKN 752
Query: 642 MKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
M+ +GVKK G SW++ +++VH F D HPQ + ++ + + +++++ G+VPDT+ V
Sbjct: 753 MRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCV 812
Query: 702 LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDR 761
LH+V+ED KE +L HSEKLAIAFG+++TP TT+R+ KNLRVCNDCH+A KFI K+++R
Sbjct: 813 LHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMER 872
Query: 762 EIVVRDATRFHHFKKGLCSCRDYW 785
EI+VRD RFHHFK+G CSC DYW
Sbjct: 873 EIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 244/535 (45%), Gaps = 91/535 (17%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G + C+VF+ + +RD VSW + I +++ A+ F M + +
Sbjct: 132 NTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENME 191
Query: 143 PTQFTVTSVLASCTALG---DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
+ FT+ SV +C+ LG L GK++H + ++ G N+L+ MYAK+G +
Sbjct: 192 LSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTF-TNNALMAMYAKLGRVDDS 250
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
KA+F+ +++ SWN +MI+ +SQ+
Sbjct: 251 KALFESFVDRDMVSWN-------------------------------TMISSFSQSDRFS 279
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EAL F M+ + ++ D T+AS L AC++LE+L +GK+IHAY++R N L
Sbjct: 280 EALAFFRLMVLE-GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN---------NDL 329
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
I N + L+D Y + RR+FD + R +
Sbjct: 330 IE-----------------------NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIEL 366
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W AM+ GY +NGL++ A+ LF M++ G PN T+++++ + + + IH A
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
++ G V NAL+ MYS+ G ++ + +F+ + R + VSW +MI G A
Sbjct: 427 VKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR-DRVSWNTMITGYVLSGRYSNA 485
Query: 499 IQLFERMLEL-----------------GIKPDHITYVGVLTACTHGGLVEQGQRYYN-MM 540
+ L M + KP+ IT + VL C + +G+ + +
Sbjct: 486 LVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAI 545
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+N+ T +++VD+ + G L + MP +V+ W L+ AC +H
Sbjct: 546 RNMLASDITVG--SALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMH 597
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 230/492 (46%), Gaps = 75/492 (15%)
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
P+R + SW + + F+ AI ++EM P F +VL + + L DL G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 166 KVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
++H+ VK G S V V N+L+NMY K G
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCG------------------------------ 142
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G D+ + FD++ +RD V+WNS IA + +AL F M + +++ FTL S
Sbjct: 143 GIGDVCKV-FDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQME-NMELSSFTLVSV 200
Query: 285 LSACANL---EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
AC+NL L+LGKQ+H Y +R D NAL++ YAK+G V+
Sbjct: 201 ALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVD----------- 248
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
++ +F+S DRD+V+W M+ + Q+ +A+ FR
Sbjct: 249 ----------------------DSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFR 286
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS-VSNALITMYSKA 460
MV EG + + T++++L S L LD GK+IHA LR+ + S V +AL+ MY
Sbjct: 287 LMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNC 346
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVG 519
+ + RRVF+ I R+ + W +MI A++GL E+A+ LF M+++ G+ P+ T
Sbjct: 347 RQVESGRRVFDHILGRRIEL-WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMAS 405
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
V+ AC H + + + K +++D+ R G + + ++M +
Sbjct: 406 VMPACVHCEAFSNKESIHGYAVKL-GFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR 464
Query: 580 PDVVAWGSLLSA 591
D V+W ++++
Sbjct: 465 -DRVSWNTMITG 475
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 141/301 (46%), Gaps = 32/301 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H +K G +++N+LM+ Y++ + ++ +FD M V+ SWNT+++ Y GR
Sbjct: 422 IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGR 481
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV----LPTQFTVTS 150
++ +V +E+ R +N + + D+ P T+ +
Sbjct: 482 ------------------YSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMT 523
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL C AL ++ GK++H++ ++ L+ + V ++L++MYAK G +++ VF+ M KN
Sbjct: 524 VLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKN 583
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIER---------DVVTWNSMIAGYSQNGYDFEA 261
V +WNV++ G+ + A F M+ + VT+ ++ A S +G E
Sbjct: 584 VITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEG 643
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M D ++P A + +L+ ++ + EFD G + L +
Sbjct: 644 LNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYEL-VNTMPAEFDKVGAWSSLLGA 702
Query: 322 C 322
C
Sbjct: 703 C 703
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I+ L + + ++L++ YAK ++ +++VF+EMP K + +WN ++ A
Sbjct: 537 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 596
Query: 92 QGRLDLACEVFNLM-----------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
G+ + A E+F M PN V++ T+ + G + +F M D
Sbjct: 597 HGKGEEALELFKNMVAEAGRGGEAKPNE--VTFITVFAACSHSGLISEGLNLFYRMKHDH 654
Query: 141 -VLPT 144
V PT
Sbjct: 655 GVEPT 659
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 272/754 (36%), Positives = 423/754 (56%), Gaps = 97/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+ +IK G+ + ++ +L++ Y I A ++F + + WN +L
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVML----- 387
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
V + ++ + R+F +M ++P QFT S+
Sbjct: 388 --------------------------VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSI 421
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT++G L G+++H+ V+KTG V V + L++MYAK
Sbjct: 422 LRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAK------------------- 462
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
G+LD A + E DVV+W ++I+GY+Q+ EAL F ML +
Sbjct: 463 ------------HGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEML-N 509
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ D +S +SACA ++ L G+QIHA + + +GNAL+S YA+ G ++
Sbjct: 510 RGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKE 569
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A YL F+ + +D ++W ++ G+ Q+G
Sbjct: 570 A----------YLE-----------------------FEKIDAKDSISWNGLISGFAQSG 596
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+DA+++F M R + + +T + +S ++++A++ GKQIHA ++ G S + VSN
Sbjct: 597 YCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSN 656
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
ALIT Y+K G+I ARR F + + + VSW +MI +QHG G EA+ LFE+M ++G
Sbjct: 657 ALITFYAKCGSIEDARREFCEMPEKND-VSWNAMITGYSQHGYGNEAVNLFEKMKQVGEM 715
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+H+T+VGVL+AC+H GLV +G Y+ M H + P P+H+A +VDL+ RAG L A
Sbjct: 716 PNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARK 775
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FIE MP+EPD W +LLSAC VHKN+++G+ AA+ LL +EP++S Y L N+Y+ GK
Sbjct: 776 FIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGK 835
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+ R+ M+ GVKK G SW++++N VH F V D LHP D IY +A++ + E
Sbjct: 836 WDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAE 895
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+ D S+L+DVE++ K+ + HSEKLAI FGL+S + + +MKNLRVC DCHS
Sbjct: 896 IGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSW 955
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IKF+ K+ +R I+VRDA RFHHF+ G+CSC+DYW
Sbjct: 956 IKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 158/532 (29%), Positives = 263/532 (49%), Gaps = 72/532 (13%)
Query: 64 ISYAKKVFDEMPVK-TLCS---WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
I YA+++ + LCS N ++ YAK G + A +VF+ + +DSVSW +I
Sbjct: 128 IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISG 187
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
+++ G + AI +F EM + PT + +SVL+ CT + G+++H+ V K G S
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V N+L+ +Y+++ + + A+ VF M+ K
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSK------------------------------ 277
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
D V++NS+I+G +Q G+ AL +F M +D LKPD T+AS LSACA+ L G+Q
Sbjct: 278 -DEVSFNSLISGLAQQGFSDGALELFTKMKRD-YLKPDCVTVASLLSACASNGALCKGEQ 335
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H+Y+I+ +GIS ++I LLD Y+
Sbjct: 336 LHSYVIK--------------------------------AGISS-DMIVEGALLDLYVNC 362
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
DI A +F + + +VV W MLV + + ++ +FR M +G PN +T ++L
Sbjct: 363 SDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSIL 422
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
+S+ +LD G+QIH +++G ++ V + LI MY+K G ++ A + + +
Sbjct: 423 RTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDV 481
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSWT++I AQH L EA++ F+ ML GI+ D+I + ++AC + QG R +
Sbjct: 482 VSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG-RQIHA 540
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
V S ++V L R G ++EAY E + + D ++W L+S
Sbjct: 541 QSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLISG 591
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 261/555 (47%), Gaps = 87/555 (15%)
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
LC N ++ Y G LD +VF MPNR SW II + E + +F M+
Sbjct: 46 VLC--NKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI 103
Query: 138 QDQVLPTQFTVTSVLASCTA--LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
++ V PT+ + SVL +C+ +G + +++H+ ++ GL ++N L+ +YAK G
Sbjct: 104 EENVSPTEISFASVLRACSGHRIG-IRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGL 162
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ A+ VFD + +D V+W +MI+G+SQN
Sbjct: 163 IISARKVFD-------------------------------NLCTKDSVSWVAMISGFSQN 191
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
GY+ EA+ +F M + + P + +S LS C ++ +G+Q+HA + + V
Sbjct: 192 GYEEEAIHLFCEM-HTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL++ Y+ ++ + A ++F ++ +
Sbjct: 251 CNALVTLYS---------------------------------RMPNFVSAEKVFSKMQSK 277
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V++ +++ G Q G + A+ELF M R+ KP+ T++++LS +S +L G+Q+H
Sbjct: 278 DEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLH 337
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ +++G +S + V AL+ +Y +I A +F L + V W M+VA +
Sbjct: 338 SYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF-LTAQTENVVLWNVMLVAFGKLDNL 396
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF-- 553
E+ ++F +M G+ P+ TY +L CT G ++ G++ + ++ T F
Sbjct: 397 SESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHT------QVIKTGFQFNV 450
Query: 554 ---ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
+ ++D+ + G L A+ + + E DVV+W +L+S H NL + K +L
Sbjct: 451 YVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH-NLFAEALKHFKEML 508
Query: 611 ---IEPDNSGAYSAL 622
I+ DN G SA+
Sbjct: 509 NRGIQSDNIGFSSAI 523
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 229/527 (43%), Gaps = 101/527 (19%)
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L C G L KK+H ++K G + N L+++Y +GD
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD--------------- 60
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
LD F+ M R V +W+ +I+G+ + L +F+ M++
Sbjct: 61 ----------------LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIE 104
Query: 271 DSSLKPDKFTLASTLSACANLE-KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++ + P + + AS L AC+ ++ +QIHA II + + N LI YAK G
Sbjct: 105 EN-VSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNG-- 161
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
I AR++FD+L +D V+W AM+ G+ Q
Sbjct: 162 -------------------------------LIISARKVFDNLCTKDSVSWVAMISGFSQ 190
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG ++A+ LF M G P Y S++LS + + D G+Q+HA + G + V
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NAL+T+YS+ N +A +VF+ + + E VS+ S+I LAQ G + A++LF +M
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQSKDE-VSFNSLISGLAQQGFSDGALELFTKMKRDY 309
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYY-------------------NMMKNVHKIKPTP 550
+KPD +T +L+AC G + +G++ + ++ N IK
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 551 SHFAS-----------MVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHK 596
F + M+ G+ L E++ M ++ P+ + S+L C
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429
Query: 597 NLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
LDLG +I + + N S L ++Y+ GK + A I +++
Sbjct: 430 ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 8/192 (4%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M G N T +L + + SL K++H L+ G + + N L+ +Y G+
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
++ +VF + R SW +I + + + LF M+E + P I++ VL
Sbjct: 61 LDGVVKVFEDMPNRS-VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLR 119
Query: 523 ACTHGGLVEQGQRYYNMMKN---VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
AC+ + G RY + H + +P ++ L + GL+ A +N+
Sbjct: 120 ACSGHRI---GIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL-CT 175
Query: 580 PDVVAWGSLLSA 591
D V+W +++S
Sbjct: 176 KDSVSWVAMISG 187
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/740 (38%), Positives = 434/740 (58%), Gaps = 62/740 (8%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
NS + YA+ I A++VFDEMP K + SWN++++ Y + R A +F+ MP R++V
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-----TQFTVTSVLASCTALGDLSAGKK 166
SW +I Y + A + F M + V+ + +++ L K
Sbjct: 80 SWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKN 139
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
V S+ V G G + V DE A+ +FD M +K+V + ++S + GR
Sbjct: 140 VVSWTVMLG--GLIQVRRI---------DE--ARGLFDIMPVKDVVARTNMISGYCQEGR 186
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
L AR FD+M R+V++W +MI+GY QNG A +F M P+K ++ T
Sbjct: 187 LAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM-------PEKNEVSWT-- 237
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
A++ Y + G +E A ++ + + V
Sbjct: 238 -------------------------------AMLMGYTQGGRIEEASELFDAMPVK--AV 264
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+A ++ G+ + G++ AR++FD +R++D W+AM+ YE+ G +A+ LF M RE
Sbjct: 265 VACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQRE 324
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G + N +L ++LSV +SLASLDHG+Q+HA ++S S + V++ LITMY K G++ A
Sbjct: 325 GVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKA 384
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
R++F+ ++ V W S+I AQHGL EEA+Q+F M G+ D +T+VGVL+AC++
Sbjct: 385 RQIFDRFS-PKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSY 443
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
G V++G + MK+ + ++P H+A MVDLLGRAGL+ +A + I+ MP+E D + WG
Sbjct: 444 TGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWG 503
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LL ACR H N++L ++AA+KLL +EP N+G Y L N+Y+S G+W D A +R++M+
Sbjct: 504 ALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKK 563
Query: 647 VKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDV 705
V K+ G SW++++ +VH+F G HP+ +I + K+ ++E G+ PD++ VLHDV
Sbjct: 564 VSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDV 623
Query: 706 EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
+E+ K + L HHSE+LA+AFGL+ PE +R+MKNLRVC DCHSAIK I K+ REI++
Sbjct: 624 DEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIIL 683
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RDA RFHHFK G CSCRDYW
Sbjct: 684 RDANRFHHFKDGFCSCRDYW 703
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 219/494 (44%), Gaps = 115/494 (23%)
Query: 9 LISPLE-FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-------SVFLKNSLMNFYAK 60
L+S E + + + N+ S +G L+ R I L V + ++++ Y +
Sbjct: 124 LVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQ 183
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
++ A+++FDEMP + + SW T++S Y + G++D+A ++F +MP ++ VSWT +++ Y
Sbjct: 184 EGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGY 243
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+ GR + A +F M V +V+A
Sbjct: 244 TQGGRIEEASELFDAM----------PVKAVVA--------------------------- 266
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
N+++ + + G+ A+ VFD +R E+
Sbjct: 267 --CNAMILGFGQNGEVAKARQVFDQIR-------------------------------EK 293
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
D TW++MI Y + G++ EAL +FA M ++ ++ + +L S LS CA+L L G+Q+
Sbjct: 294 DDGTWSAMIKVYERKGFEVEALNLFALMQRE-GVQSNFPSLISVLSVCASLASLDHGRQV 352
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA +++++FD+ V + LI+ Y K G
Sbjct: 353 HAELVKSQFDSDVFVASVLITMYVKCG--------------------------------- 379
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D+ AR+IFD +D+V W +++ GY Q+GL ++A+++F M G + T +LS
Sbjct: 380 DLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLS 439
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQE 478
S + G +I S ++S + ++ + +AG +N A + + +
Sbjct: 440 ACSYTGKVKEGLEIFES-MKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEAD 498
Query: 479 TVSWTSMIVALAQH 492
+ W +++ A H
Sbjct: 499 AIIWGALLGACRTH 512
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/692 (39%), Positives = 414/692 (59%), Gaps = 44/692 (6%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL +K R+ + VH R+I+ VF++N L++ Y K + YA+KVFD M
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+N+I+S + G +D + +F+LMP +D SW ++I + + RF+ A+ FV
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M +D + ++ S L++C+ L DL G ++H + K+ S V + + L++ Y+K G
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFDG M E++VV+WN +I Y QN
Sbjct: 207 VGCARRVFDG-------------------------------MEEKNVVSWNCLITCYEQN 235
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGP 314
G EAL F M + KPD+ TLAS +SACA L K G QIHA +++++ F
Sbjct: 236 GPAIEALEAFGRM-TELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLI 294
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+GNAL+ YAK G V A+ + ++ + N ++ TT++ GY K + AR +F +++
Sbjct: 295 LGNALVDMYAKCGRVNEARCVFDRMPVR--NAVSETTMVSGYAKSASVKAARSMFATIKQ 352
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+D+V+W A++ GY QNG N++A+ LFR + RE P +YT +L+ S++LA L+ G+Q
Sbjct: 353 KDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQA 412
Query: 435 HASALR------SGEASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQETVSWTSMIV 487
H+ ++ SGE + V N+LI MY K G++ RVF N++ ++ VSW +MI+
Sbjct: 413 HSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVE--KDHVSWNTMII 470
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQ+G G EA++LF++MLE G KPDH+T +G L AC+H GLVE+G+RY+ M H +
Sbjct: 471 GYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLL 530
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ MVDLLGRAG L+EA + IE+MP +PD V W SLLSAC+VH+N+ LGK AEK
Sbjct: 531 PVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEK 590
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
+ I+P +SG Y L N+YS G+W DA ++RK M+ GV K G SW+ IQ+ VHVF V
Sbjct: 591 IFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMV 650
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTA 699
+D HPQ+ IY+ + + +++ G+VPD +
Sbjct: 651 KDKRHPQKKEIYSILKLLTKHMRQAGYVPDAS 682
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 184/375 (49%), Gaps = 7/375 (1%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D A L C L + + +H +I+T F + N LI Y K G ++ A+K+
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++ +S NV +F +++ ++ G + + +F + ++D +W +M+ G+ Q+ ++A
Sbjct: 83 DR--MSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEA 140
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++ F M R+ N+Y+ + LS S L L G QIH +S + + + + LI
Sbjct: 141 LDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDF 200
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YSK G + ARRVF+ + + VSW +I Q+G EA++ F RM ELG KPD +T
Sbjct: 201 YSKCGLVGCARRVFDGME-EKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
V++AC ++G + + + K + ++VD+ + G + EA + M
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P+ + V+ +++S ++ K A I+ + +++AL Y+ G+ E+A
Sbjct: 320 PVR-NAVSETTMVSGYAKSASV---KAARSMFATIKQKDIVSWNALIAGYTQNGENEEAL 375
Query: 637 NIRKSMKYVGVKKTQ 651
+ + +K V T
Sbjct: 376 GLFRMLKRESVCPTH 390
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/684 (39%), Positives = 408/684 (59%), Gaps = 61/684 (8%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL S L+SR+ +LVHARI+ + +F++N L++ Y K + + A+K+FD MP
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ +WN+++S K G LD A +F MP D SW +++ + + RF+ ++ FV+
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++ L +++ S L++C L DL+ G +VH+ V K+ S V + ++L++MY+K G
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF GM IER++VTWNS+I Y QN
Sbjct: 198 VACAEEVFSGM-------------------------------IERNLVTWNSLITCYEQN 226
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGP 314
G EAL +F M+ DS L+PD+ TLAS +SACA+L LK G QIHA +++T +F
Sbjct: 227 GPASEALEVFVRMM-DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+GNAL+ YAK V A+++ ++ +S NV++ T+++ GY + + AR +F +
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDR--MSIRNVVSETSMVSGYARAASVKAARFMFSKMTQ 343
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
R+VV+W A++ GY QNG N++A+ LFR + RE P +YT +L
Sbjct: 344 RNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLK-------------- 389
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
S + V N+LI MY K G+I RVF + R + VSW ++IV AQ+G
Sbjct: 390 ----------SDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER-DCVSWNAIIVGYAQNGY 438
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G EA+Q+F +ML G KPDH+T +GVL AC+H GLVE+G+ Y+ M+ H + P H+
Sbjct: 439 GAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYT 497
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDLLGRAG L EA N IE MP+ PD V WGSLL+AC+VH N+++GK AAEKLL I+P
Sbjct: 498 CMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPW 557
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
NSG Y L N+Y+ G+W D +RK M+ GV K G SW++++++VHVF V+D HP
Sbjct: 558 NSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPH 617
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDT 698
R IY+ + + +++K +G++PD
Sbjct: 618 RKQIYSVLKMLTEQMKRVGYIPDA 641
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 292/756 (38%), Positives = 433/756 (57%), Gaps = 69/756 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTE--SISYAKKVFDEMPVKTLCSWNTILSAYA 90
K +H++IIK GLH + F + L+ F A + ++SYA +F+ + WNT++
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRG-- 106
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+S+S + + AI +V M+ V P +T
Sbjct: 107 ------------------NSLSSSPV-----------GAIDFYVRMLLCGVEPNSYTFPF 137
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L SC +G GK++H V+K GL V SL+NMYA+ G+ A+ VF L++
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
S+ +++ + G LD AR F+++ RD V+WN+MIAGY+Q+G EAL F M K
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM-K 256
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+++ P++ T+ + LSACA L+LG + ++I
Sbjct: 257 RANVAPNESTMVTVLSACAQSGSLELGNWVRSWI-------------------------- 290
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
E G+ N+ L+D Y K GD+ AR +F+ + ++D+++W M+ GY
Sbjct: 291 ------EDHGLGS-NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA-SSLSV 449
K+A+ LFR M + +PN+ T ++L + L +LD GK IHA + ++ S+
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+LI MY+K GNI AA++VF + + SW +MI LA HG A++LF +M + G
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMK-PKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+PD IT+VGVL+AC+H GLVE G++ ++ M + I P H+ M+DLLGRAGL EA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
++NM ++PD WGSLL ACRVH N++LG+ AA+ L +EP+N GAY L N+Y++
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+W+D A IR + G+KK G S +++ + VH F V D +H Q IY + +I +
Sbjct: 583 GRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLL 642
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
++ G VPDT+ VL+D++E+ KE L HHSEKLAIAFGLIST TT+RI+KNLRVC +CH
Sbjct: 643 EKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCH 702
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
SAIK I K+ +REI+ RD RFHHFK G CSC DYW
Sbjct: 703 SAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 234/494 (47%), Gaps = 71/494 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S K GK +H ++K GL F+ SL+N YA+ + YA+ VF +
Sbjct: 135 FPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSS 194
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++ S+ +++ Y +G LD A +F +P RD+VSW +I Y + GRF+ A+ F E
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V P + T+ +VL++C G L G V S++ GL + + N+L++MY+K GD
Sbjct: 255 MKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD 314
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +F+G+ K++ SWNV MI GYS
Sbjct: 315 LDKARDLFEGICEKDIISWNV-------------------------------MIGGYSHM 343
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG-P 314
EAL +F M + S+++P+ T S L ACA L L LGK IHAYI + T
Sbjct: 344 NSYKEALALFRKM-QQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ +LI YAK G +E A+++F ++
Sbjct: 403 LWTSLIDMYAKCGNIE---------------------------------AAKQVFAGMKP 429
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+ + +W AM+ G +G A+ELFR M EG +P++ T +LS S ++ G+Q
Sbjct: 430 KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQC 489
Query: 435 HASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+S + + S L +I + +AG + A + + + + W S++ A HG
Sbjct: 490 FSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549
Query: 494 ---LGEEAIQ-LFE 503
LGE A + LFE
Sbjct: 550 NVELGEFAAKHLFE 563
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 278/750 (37%), Positives = 437/750 (58%), Gaps = 36/750 (4%)
Query: 44 LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN 103
L V N + + + ++ A+++F MP ++ ++N +L+ Y+ GRL LA +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 104 LMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLS 162
+P D+ S+ T++ +A +F EM V+D V T +++S G +S
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVS 148
Query: 163 AGKKVHSFVV---KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
+ H F + K +S N +L Y + G A+ +F+ +V SWN ++S
Sbjct: 149 LAR--HYFDLAPEKDAVS-----WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMS 201
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ G++ AR FD+M RDVV+WN M++GY++ G EA +F D++ D F
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRDVF 256
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG----NALISCYAKVGGVEIAQKI 335
T + +S A L+ +++ FDA NA+++ Y + ++ A+++
Sbjct: 257 TWTAVVSGYAQNGMLEEARRV--------FDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
+ NV ++ T+L GY + G + A+ +FD++ +D V+W AML Y Q G +++
Sbjct: 309 FNM--MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
++LF M R G N + +LS + +A+L+ G Q+H +R+G V NAL+
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MY K GN+ AR F + R + VSW +MI A+HG G+EA+++F+ M KPD I
Sbjct: 427 MYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 485
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T VGVL AC+H GLVE+G Y+ M + + P H+ M+DLLGRAG L EA++ +++
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 545
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EPD WG+LL A R+H+N +LG+ AAEK+ +EP+N+G Y L N+Y+S GKW DA
Sbjct: 546 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 605
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+R M+ GVKK GFSW+++QNKVH F D +HP+++ IY + + +K+ G+V
Sbjct: 606 RKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 665
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
T VLHDVEE+ KE ML++HSEKLA+A+G+++ P +R++KNLRVC DCH+A K+I
Sbjct: 666 SATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYI 725
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ R I++RD+ RFHHF+ G CSC DYW
Sbjct: 726 SAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H R+I+ G + F+ N+L+ Y K ++ A+ F+EM + + SWNT+++ YA+
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G A E+F++M D ++ ++ + G + I F M D F
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD------FG 515
Query: 148 VTSVLASCTALGDL 161
VT+ T + DL
Sbjct: 516 VTAKPEHYTCMIDL 529
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/815 (33%), Positives = 448/815 (54%), Gaps = 78/815 (9%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
E Y+ L++ + + ++G +H +IK G L V+L+ +LMNFY + + A +VF E
Sbjct: 134 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE 193
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
MPN +++ W I+ + + + + +F
Sbjct: 194 -------------------------------MPNPEALLWNEAIILNLQSEKLQKGVELF 222
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+M + T+ VL +C +G L+A K++H +V + GL V++ N L++MY+K
Sbjct: 223 RKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKN 282
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMI 249
G +A+ VFD M +N SSWN ++S + G L+ A + F ++ ++ D+VTWN ++
Sbjct: 283 GKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 342
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
+G+ +GY E L + M + KP+ ++ S L A + L L +GK+ H Y++R F
Sbjct: 343 SGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGF 401
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
D VG +LI Y K + AQ + + + N+ A+ +L+ GY G A R+
Sbjct: 402 DCDVYVGTSLIDMYVKNHSLTSAQAVFDN--MKNRNIFAWNSLVSGYSFKGMFEDALRLL 459
Query: 370 DSLRDR---------------------------------------DVVAWTAMLVGYEQN 390
+ + +VV+WTA++ G Q
Sbjct: 460 NQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQA 519
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G N+D+++ F M +EG PN+ +++ +L +SL+ L GK+IH ++R+G + V+
Sbjct: 520 GNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 579
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
ALI MYSK+ ++ A +VF I + SW MI+ A GLG+EAI +F M ++G+
Sbjct: 580 TALIDMYSKSSSLKNAHKVFRRIQ-NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGV 638
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
PD IT+ +L+AC + GL+ +G +Y++ M ++I P H+ MVDLLGRAG L EA+
Sbjct: 639 GPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAW 698
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+ I MPL+PD WG+LL +CR+HKNL + AA+ L +EP+NS Y + NLYS
Sbjct: 699 DLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFN 758
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+WED ++R+ M GV+ Q +SW+QI +VHVF ++ HP IY ++ ++ E+K
Sbjct: 759 RWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMK 818
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
++G+VPD V +++E K+++L H+EKLAI +GLI +R++KN R+C+DCHS
Sbjct: 819 KLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHS 878
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K+I + RE+ +RD RFHHF++G CSC D+W
Sbjct: 879 AAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 143/611 (23%), Positives = 274/611 (44%), Gaps = 54/611 (8%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY-NEIGRFKNAIRMFVEMVQDQVL 142
++S+Y G A VF + R+ + W + + + + G + +F E+ V+
Sbjct: 71 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 130
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ L +CT + D+ G ++H ++K G V + +L+N Y + A V
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M WN + L++ S +L F +M
Sbjct: 191 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM------------------------- 225
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ S LK + T+ L AC + L KQIH Y+ R D+ + N LIS
Sbjct: 226 -------QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISM 278
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVV 378
Y+K G +E+A+++ + + N ++ +++ Y +G + A +F L D+V
Sbjct: 279 YSKNGKLELARRVFDS--MENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIV 336
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W +L G+ +G ++ + + + M EG KPN+ +++++L S L L+ GK+ H
Sbjct: 337 TWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYV 396
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
LR+G + V +LI MY K ++ +A+ VF+ + R +W S++ + G+ E+A
Sbjct: 397 LRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRN-IFAWNSLVSGYSFKGMFEDA 455
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
++L +M + GIKPD +T+ G+++ G ++ + K++ + P + +++
Sbjct: 456 LRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSL-GLTPNVVSWTALIS 514
Query: 559 LLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGK-IAAEKLLLIEPD 614
+AG +++ F M E P+ + LL AC L GK I + +
Sbjct: 515 GSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIE 574
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+ +AL ++YS ++A + + ++ KT SW + +FG L +
Sbjct: 575 DVFVATALIDMYSKSSSLKNAHKVFRRIQ----NKTLA-SWNCMIMGFAIFG----LGKE 625
Query: 675 RDAIYNKMAKI 685
+++N+M K+
Sbjct: 626 AISVFNEMQKV 636
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 78/326 (23%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN S+ S L+ + L N+ GK H +++ G V++ SL++ Y K S
Sbjct: 368 PNSSSMTSVLQAISELGFLNM-------GKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 420
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR--------------- 108
++ A+ VFD M + + +WN+++S Y+ +G + A + N M
Sbjct: 421 LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 480
Query: 109 ------------------------DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+ VSWT +I ++ G +++++ F +M Q+ V+P
Sbjct: 481 YAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPN 540
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
++T +L +C +L L GK++H ++ G V V +L++MY+K A VF
Sbjct: 541 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 600
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
R++N + + +WN MI G++ G EA+ +
Sbjct: 601 --RIQN-----------------------------KTLASWNCMIMGFAIFGLGKEAISV 629
Query: 265 FANMLKDSSLKPDKFTLASTLSACAN 290
F N ++ + PD T + LSAC N
Sbjct: 630 F-NEMQKVGVGPDAITFTALLSACKN 654
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 299/781 (38%), Positives = 439/781 (56%), Gaps = 63/781 (8%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP-- 75
H+L++ + + G H I G +VF+ N+L+ Y++ S+ A +FDE+
Sbjct: 15 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 74
Query: 76 -VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+ + SWN+I+SA+ K A ++F+ M T+IV + I
Sbjct: 75 GIDDVISWNSIVSAHVKSSNAWTALDLFSKM---------TLIVHEKPTNERSDII---- 121
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
++ ++L +C +L + K+VH ++ G V V N+L++ YAK G
Sbjct: 122 ------------SIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCG 169
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
A VF+ M K+V SWN +V+ + SG A F M I D+VTW ++IA
Sbjct: 170 LMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIA 229
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GYSQ G EAL +F M+ SL P+ T+ S LSACA+L G +IHAY ++
Sbjct: 230 GYSQRGCSHEALNVFRQMIFSGSL-PNCVTIISVLSACASLGAFSQGMEIHAYSLK---- 284
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
N L++ GG + +++ + L+D Y K AR IFD
Sbjct: 285 ------NCLLTLDNDFGGED-------------EDLMVYNALIDMYSKCRSFKAARSIFD 325
Query: 371 S--LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSSLA 426
L +R+VV WT M+ G+ Q G + DA++LF M+ E G PN YT+S +L + LA
Sbjct: 326 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 385
Query: 427 SLDHGKQIHASALRSGE--ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++ GKQIHA LR + +S+ V+N LI MYSK G+++ AR VF+ + ++ +SWTS
Sbjct: 386 AIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTS 444
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
M+ HG G EA+ +F++M + G PD IT++ VL AC+H G+V+QG Y++ M +
Sbjct: 445 MMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADY 504
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+A +DLL R G L +A+ +++MP+EP V W +LLSACRVH N++L + A
Sbjct: 505 GLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHA 564
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
KL+ + +N G+Y+ + N+Y++ G+W+D A IR MK G+KK G SWVQ Q
Sbjct: 565 LNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS 624
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V D HP IY + + D IK MG+VP+T LHDV+E+ K +L HSEKLA+A
Sbjct: 625 FFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALA 684
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+GL++T +RI KNLRVC DCHSA +I K+VD EIVVRD +RFHHFK G CSC Y
Sbjct: 685 YGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 744
Query: 785 W 785
W
Sbjct: 745 W 745
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 228/477 (47%), Gaps = 60/477 (12%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT+ VL +C L G H + G V + N+L+ MY++ G A +FD
Sbjct: 10 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 69
Query: 205 GMR---LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+ + +V SWN +VS H+ S W A
Sbjct: 70 EITQRGIDDVISWNSIVSAHVKSSN-----------------AWT--------------A 98
Query: 262 LGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
L +F+ M K ++ + D ++ + L AC +L+ + K++H IR VG
Sbjct: 99 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG 158
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR- 375
NALI YAK G +E A K+ + + +V+++ ++ GY + G+ A +F ++R
Sbjct: 159 NALIDAYAKCGLMENAVKVFNM--MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN 216
Query: 376 ---DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
D+V WTA++ GY Q G + +A+ +FR M+ G PN T+ ++LS +SL + G
Sbjct: 217 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGM 276
Query: 433 QIHASALRS----------GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE-TVS 481
+IHA +L++ GE L V NALI MYSK + AAR +F+ I + V+
Sbjct: 277 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 336
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
WT MI AQ+G +A++LF M+ G+ P+ T +L AC H + G++ +
Sbjct: 337 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 396
Query: 540 MKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ H+ + A+ ++++ + G + A + ++M + ++W S+++ +H
Sbjct: 397 VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 452
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 208/521 (39%), Gaps = 146/521 (28%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI- 335
D FTL L AC L + G H I F++ + NAL++ Y++ G +E A I
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 336 --VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ Q GI +VI++ +++ ++K + AWTA+
Sbjct: 69 DEITQRGID--DVISWNSIVSAHVKSSN-----------------AWTAL---------- 99
Query: 394 KDAVELFRSM---VREGP---KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+LF M V E P + + ++ +L SL ++ K++H +A+R+G +
Sbjct: 100 ----DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 155
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQ------------------------------ 477
V NALI Y+K G + A +VFN++ ++
Sbjct: 156 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 215
Query: 478 ----ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ V+WT++I +Q G EA+ +F +M+ G P+ +T + VL+AC G QG
Sbjct: 216 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 275
Query: 534 QRYYNM-MKNVHKIKPTPSHFA----------SMVDLLGRAGLLQEAYNFIENMPLEP-D 581
+ +KN + + F +++D+ + + A + +++PLE +
Sbjct: 276 MEIHAYSLKNC--LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 333
Query: 582 VVAW-------------------------------------GSLLSACRVHKNLDLGK-I 603
VV W +L AC + +GK I
Sbjct: 334 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 393
Query: 604 AAEKLLLIEPDNSGAYSALC--NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
A L + D+S + A C N+YS CG + A ++ SM + SW +
Sbjct: 394 HAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSM-----SQKSAISWTSMMTG 448
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ G ++ I+D++++ GFVPD + L
Sbjct: 449 YGMHGRG-----------SEALDIFDKMRKAGFVPDDITFL 478
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 19/257 (7%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M+R G + +++TL +L L S G H +G S++ + NAL+ MYS+ G+
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 463 INAARRVFNLIHWR--QETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKP-----DH 514
+ A +F+ I R + +SW S++ A + A+ LF +M L + KP D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 515 ITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
I+ V +L AC V Q + + N ++N + + +++D + GL++ A
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN--ALIDAYAKCGLMENAVKVF 178
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG----AYSALCNLYSSC 629
M + DVV+W ++++ N K A E + +N ++A+ YS
Sbjct: 179 NMMEFK-DVVSWNAMVAGYSQSGNF---KAAFELFKNMRKENIPLDMVTWTAVIAGYSQR 234
Query: 630 GKWEDAANIRKSMKYVG 646
G +A N+ + M + G
Sbjct: 235 GCSHEALNVFRQMIFSG 251
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 275/820 (33%), Positives = 452/820 (55%), Gaps = 102/820 (12%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V A +IK G + N + + + + A+K+FDEMP K + S NT++ Y K G
Sbjct: 29 VDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGN 88
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A +F+ M R V+WT +I Y + RF A +F +M + ++P T+ ++L+
Sbjct: 89 LSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSG 148
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
T ++ +VH VVK G + V NSLL+ Y K
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCK---------------------- 186
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+ L LA F M E+D VT+N+++ GYS+ G++ +A+ +F M +D
Sbjct: 187 ---------TRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKM-QDLGF 236
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF------------------------- 309
+P +FT A+ L+A ++ ++ G+Q+H+++++ F
Sbjct: 237 RPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARK 296
Query: 310 ------DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN------------------ 345
+ G N LI+C A G VE + ++ + + +
Sbjct: 297 LFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLN 356
Query: 346 -------------------VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
V+ +L+D Y K G A RIF L + V WTA++ G
Sbjct: 357 LEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISG 416
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q GL++D ++LF M R ++ T +++L ++LASL GKQ+H+ +RSG S+
Sbjct: 417 YVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSN 476
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ +AL+ MY+K G+I A ++F + R +VSW ++I A AQ+G G A++ FE+M+
Sbjct: 477 VFSGSALVDMYAKCGSIKEALQMFQEMPVRN-SVSWNALISAYAQNGDGGHALRSFEQMI 535
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G++P+ ++++ +L AC+H GLVE+G +Y+N M V+K++P H+ASMVD+L R+G
Sbjct: 536 HSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRF 595
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSALCNL 625
EA + MP EPD + W S+L++CR+HKN +L AA++L ++ ++ Y ++ N+
Sbjct: 596 DEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNI 655
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y++ G+W+ ++K+++ G++K +SWV+I+ K HVF D HPQ I K+ ++
Sbjct: 656 YAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDEL 715
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
+++E G+ PD+ LH+V+E+VK + L++HSE++AIAF LISTP+ + + +MKNLR C
Sbjct: 716 EKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRAC 775
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NDCH+AIK I K+V+REI VRD++RFHHF G CSC+DYW
Sbjct: 776 NDCHAAIKVISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 194/445 (43%), Gaps = 84/445 (18%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P EF +A +L + ++ + G+ VH+ ++KC +VF+ N+L++FY+K + I A+K+
Sbjct: 238 PSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKL 297
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVF--------------------------NL 104
F EMP S+N +++ A GR++ + E+F NL
Sbjct: 298 FYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNL 357
Query: 105 MPNR---------DSVS----WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-------- 143
R D++S +++ Y + +F A R+F ++ +P
Sbjct: 358 EMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGY 417
Query: 144 -----------------------TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
T S+L +C L L+ GK++HS ++++G V
Sbjct: 418 VQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNV 477
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI-- 238
++L++MYAK G A +F M ++N SWN ++S + +G A F+QMI
Sbjct: 478 FSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHS 537
Query: 239 --ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
+ + V++ S++ S G E L F +M + L+P + AS + +
Sbjct: 538 GLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDE 597
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ----SGISYLNVIAFTTL 352
+++ A R F+ + +++++ E+A K +Q G+ + + ++
Sbjct: 598 AEKLMA---RMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLR--DAAPYVSM 652
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDV 377
+ Y G+ ++ +LR+R +
Sbjct: 653 SNIYAAAGEWDSVGKVKKALRERGI 677
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 286/770 (37%), Positives = 435/770 (56%), Gaps = 67/770 (8%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H I G +VF+ N+L+ Y++ S+ A VFDE+ K +
Sbjct: 168 GRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI------------ 215
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM---VQDQVLPTQ--- 145
D +SW +I+ + + + A+ +F EM V ++ +
Sbjct: 216 ----------------DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDI 259
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
++ ++L +C +L L K++HS+ ++ G V N+L++ YAK G A VF+
Sbjct: 260 ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEA 261
M K+V SWN +V+ + SG A F+ M I DV+TW+++IAGY+Q G EA
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEA 379
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L F M+ D S +P+ T+ S LSACA+L L G +IHAY ++
Sbjct: 380 LDAFQQMILDGS-EPNSVTIISLLSACASLGALSQGMEIHAYSLKKCL------------ 426
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVA 379
++ +++ + L+D Y K AR IFDS+ R+R+VV
Sbjct: 427 ---------LSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVT 477
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
WT M+ GY Q G + DA+++F M+ + PN YT+S +L + LA+L GKQIHA
Sbjct: 478 WTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAY 537
Query: 438 ALR--SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
R E S V+N LI MYSK G+++ AR VF+ + R E VSWTSM+ HG G
Sbjct: 538 VTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNE-VSWTSMMSGYGMHGRG 596
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+EA+ +F++M + G PD I+++ +L AC+H G+V+QG Y+++M+ + + + H+A
Sbjct: 597 KEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYAC 656
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
++DLL R G L +A+ I+ MP+EP V W +LLSACRVH N++L + A KL+ ++ +N
Sbjct: 657 VIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAEN 716
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G+Y+ + N+Y++ +W+D A IR+ MK G+KK G SWVQ + F V D HP
Sbjct: 717 DGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLS 776
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY+ + ++ IK MG+VP+T LHDV+++ K +L HSEKLA+A+GL++T
Sbjct: 777 PEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCP 836
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLRVC DCHSA +I K+VD EI+VRD++RFHHFK G CSC YW
Sbjct: 837 IRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 169/611 (27%), Positives = 295/611 (48%), Gaps = 71/611 (11%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+SP F A LL+ + R+ + +H +II CGL S+ A S SY
Sbjct: 29 VSPTHF-ASLLK---ECRSVNTVRQIHQKIIACGLLSYPSSLLSVP--LAPLPSHSYVSP 82
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
K+L + ++++Y G A V + +V W ++ + + G A
Sbjct: 83 -------KSLGT--GVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRA 133
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
I + M++ P FT+ L +C L G+ +H + G V V N+L+ M
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAM 193
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y++ G A VFD ++ R D +I +WNS++
Sbjct: 194 YSRCGSLEDASLVFD-----------------------EITRKGIDDVI-----SWNSIV 225
Query: 250 AGYSQNGYDFEALGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
A + + AL +F+ M K ++ + D ++ + L ACA+L+ L K+IH+Y
Sbjct: 226 AAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYA 285
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
IR A V NALI YAK G + A K+ + + +V+++ ++ GY + G+ G
Sbjct: 286 IRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV--MEFKDVVSWNAMVTGYTQSGNFGA 343
Query: 365 ARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
A +F+++R DV+ W+A++ GY Q G +++A++ F+ M+ +G +PN+ T+ ++LS
Sbjct: 344 AFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLS 403
Query: 421 VSSSLASLDHGKQIHASALRSGEAS------------SLSVSNALITMYSKAGNINAARR 468
+SL +L G +IHA +L+ S L V NALI MYSK + AAR
Sbjct: 404 ACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARS 463
Query: 469 VFNLIHWRQE-TVSWTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITYVGVLTACT 525
+F+ I R+ V+WT MI AQ+G +A+++F M+ + P+ T +L AC
Sbjct: 464 IFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACA 523
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
H + G++ + + H+ +P+ A+ ++D+ + G + A N ++MP + + V+
Sbjct: 524 HLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KRNEVS 582
Query: 585 WGSLLSACRVH 595
W S++S +H
Sbjct: 583 WTSMMSGYGMH 593
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 127/578 (21%), Positives = 238/578 (41%), Gaps = 139/578 (24%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
VV+ ++ G A + +++ V WN ++ + + G+ A+G+ ML+ + KP
Sbjct: 89 VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR-AGTKP 147
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D FTL L AC L G+ +H I F++ V NAL++ Y++ G +E A +
Sbjct: 148 DHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVF 207
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++ R+ D DV++W +++ + + + A
Sbjct: 208 DEI-------------------------TRKGID-----DVISWNSIVAAHVKGSNPRTA 237
Query: 397 VELFRSM---VRE---GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ELF M V E + + ++ +L +SL +L K+IH+ A+R+G + V
Sbjct: 238 LELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVC 297
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQ--------------------------------- 477
NALI Y+K G++N A +VFN++ ++
Sbjct: 298 NALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIP 357
Query: 478 -ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ ++W+++I AQ G +EA+ F++M+ G +P+ +T + +L+AC G + QG
Sbjct: 358 LDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEI 417
Query: 537 --YNMMKNVHKIKPTPSH---------FASMVDLLGRAGLLQEAYNFIENMP-LEPDVVA 584
Y++ K + + + +++D+ + + A + +++P E +VV
Sbjct: 418 HAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVT 477
Query: 585 W-------------------------------------GSLLSACRVHKNLDLGK---IA 604
W +L AC L +GK
Sbjct: 478 WTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAY 537
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
+ EP + L ++YS CG + A N+ SM K SW + + +
Sbjct: 538 VTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM-----PKRNEVSWTSMMSGYGM 592
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
G ++A+ I+D++++ GFVPD S L
Sbjct: 593 HG------RGKEAL-----DIFDKMQKAGFVPDDISFL 619
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 31 VGKLVHARIIKCGLHLS--VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
+GK +HA + + + F+ N L++ Y+K + A+ VFD MP + SW +++S
Sbjct: 530 MGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG 589
Query: 89 YAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
Y GR A ++F+ M D +S+ ++ + G + F M +D
Sbjct: 590 YGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRD 644
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/761 (36%), Positives = 433/761 (56%), Gaps = 46/761 (6%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAK---KVFDEMPVKTLCSWNTILSAYAKQ 92
HA I++ L L SL++FYA S+S + + +P TL S+++++ A+A+
Sbjct: 23 HALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARS 82
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
F + + F + +++P F + S +
Sbjct: 83 HH-------------------------------FPHVLTTFSHLHPLRLIPDAFLLPSAI 111
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
SC +L L G+++H+F +G V +SL +MY K + A+ +FD M ++V
Sbjct: 112 KSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVV 171
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
W+ +++ + G ++ A+ F +M +E ++V+WN M+AG+ NG+ EA+GMF M
Sbjct: 172 VWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMM 231
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L PD T++ L A LE + +G Q+H Y+I+ + V +A++ Y K G
Sbjct: 232 LVQG-FWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGC 290
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAML 384
V+ ++ ++ + + + + L G + G + A +F+ +D+ +VV WT+++
Sbjct: 291 VKEMSRVFDE--VEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSII 348
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
QNG + +A+ELFR M G +PN T+ +++ ++++L HGK+IH +LR G
Sbjct: 349 ASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIF 408
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ V +ALI MY+K G I ARR F+ + VSW +++ A HG +E +++F
Sbjct: 409 DDVYVGSALIDMYAKCGRIQLARRCFDKMS-ALNLVSWNAVMKGYAMHGKAKETMEMFHM 467
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
ML+ G KPD +T+ VL+AC GL E+G R YN M H I+P H+A +V LL R G
Sbjct: 468 MLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVG 527
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L+EAY+ I+ MP EPD WG+LLS+CRVH NL LG+IAAEKL +EP N G Y L N
Sbjct: 528 KLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSN 587
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+S G W++ IR+ MK G++K G+SW+++ +KVH+ D HPQ I K+ K
Sbjct: 588 IYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDK 647
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++K+ G++P T VL DVEE KEQ+L HSEKLA+ GL++T L+++KNLR+
Sbjct: 648 LNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRI 707
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C+DCH+ IK I +L REI VRD RFHHFK G+CSC D+W
Sbjct: 708 CDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 240/493 (48%), Gaps = 52/493 (10%)
Query: 22 SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS 81
++L++ +P G+ +HA G + +SL + Y K + I A+K+FD MP + +
Sbjct: 115 ASLRALDP--GQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVV 172
Query: 82 WNTILSAYAKQGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
W+ +++ Y++ G ++ A E+F M PN VSW ++ + G + A+ MF
Sbjct: 173 WSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNL--VSWNGMLAGFGNNGFYDEAVGMFRM 230
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+ P TV+ VL + L D+ G +VH +V+K GL V +++L+MY K G
Sbjct: 231 MLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGC 290
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF----DQMIERDVVTWNSMIAG 251
VFD + + S N ++ +G +D A F DQ +E +VVTW S+IA
Sbjct: 291 VKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIAS 350
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
SQNG D EAL +F +M + ++P+ T+ S + AC N+ L GK+IH + +R
Sbjct: 351 CSQNGKDLEALELFRDM-QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFD 409
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
VG+ALI YAK G +++A++ ++ +S LN
Sbjct: 410 DVYVGSALIDMYAKCGRIQLARRCFDK--MSALN-------------------------- 441
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+V+W A++ GY +G K+ +E+F M++ G KP+ T + +LS + + G
Sbjct: 442 -----LVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496
Query: 432 KQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
+ + S + G + L+T+ S+ G + A + + + + W +++ +
Sbjct: 497 WRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCR 556
Query: 491 QH---GLGEEAIQ 500
H LGE A +
Sbjct: 557 VHNNLSLGEIAAE 569
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 127/309 (41%), Gaps = 50/309 (16%)
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL-IHWRQET 479
+SSS ASL +Q HA LR S ++ +L++ Y+ A +++ + L H T
Sbjct: 9 LSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPT 68
Query: 480 V-SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+ S++S+I A A+ + F + L + PD + +C ++ GQ+ +
Sbjct: 69 LFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHA 128
Query: 539 MMKNVHKIKPTPSHFA-SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+ T S A S+ + + + +A + MP + DVV W ++++
Sbjct: 129 FAAASGFL--TDSIVASSLTHMYLKCDRILDARKLFDRMP-DRDVVVWSAMIAGYS---- 181
Query: 598 LDLGKIAAEKLLL-------IEPD------------NSGAYSALCNLYSSC---GKWEDA 635
LG + K L +EP+ N+G Y ++ G W D
Sbjct: 182 -RLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDG 240
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI------YNK------MA 683
+ + + VG + V + +VH + ++ L + + Y K M+
Sbjct: 241 STVSCVLPAVGCLED-----VVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMS 295
Query: 684 KIWDEIKEM 692
+++DE++EM
Sbjct: 296 RVFDEVEEM 304
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 277/750 (36%), Positives = 436/750 (58%), Gaps = 36/750 (4%)
Query: 44 LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN 103
L V N + + + ++ A+++F MP ++ ++N +L+ Y+ GRL LA +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 104 LMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLS 162
+P D+ S+ T++ +A +F EM V+D V T +++S G +S
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVS 148
Query: 163 AGKKVHSFVV---KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
+ H F + K +S N +L Y + G A+ +F+ + SWN ++S
Sbjct: 149 LAR--HYFDLAPEKDAVS-----WNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMS 201
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ G++ AR FD+M RDVV+WN M++GY++ G EA +F D++ D F
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRDVF 256
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG----NALISCYAKVGGVEIAQKI 335
T + +S A L+ +++ FDA NA+++ Y + ++ A+++
Sbjct: 257 TWTAVVSGYAQNGMLEEARRV--------FDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
+ NV ++ T+L GY + G + A+ +FD++ +D V+W AML Y Q G +++
Sbjct: 309 FNM--MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
++LF M R G N + +LS + +A+L+ G Q+H +R+G V NAL+
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MY K GN+ AR F + R + VSW +MI A+HG G+EA+++F+ M KPD I
Sbjct: 427 MYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 485
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T VGVL AC+H GLVE+G Y+ M + + P H+ M+DLLGRAG L EA++ +++
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 545
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EPD WG+LL A R+H+N +LG+ AAEK+ +EP+N+G Y L N+Y+S GKW DA
Sbjct: 546 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 605
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+R M+ GVKK GFSW+++QNKVH F D +HP+++ IY + + +K+ G+V
Sbjct: 606 RKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 665
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
T VLHDVEE+ KE ML++HSEKLA+A+G+++ P +R++KNLRVC DCH+A K+I
Sbjct: 666 SATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYI 725
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ R I++RD+ RFHHF+ G CSC DYW
Sbjct: 726 SAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H R+I+ G + F+ N+L+ Y K ++ A+ F+EM + + SWNT+++ YA+
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G A E+F++M D ++ ++ + G + I F M D F
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD------FG 515
Query: 148 VTSVLASCTALGDL 161
VT+ T + DL
Sbjct: 516 VTAKPEHYTCMIDL 529
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/705 (37%), Positives = 406/705 (57%), Gaps = 66/705 (9%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
S + ++S Y L A VF + + ++W ++I + + F A+ FVEM
Sbjct: 41 SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASG 100
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
P SVL SCT + DL G+ VH F+V+ G+ + N+L+NMY+K+
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLG----- 155
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+D R F+ M +DVV++N++IAGY+Q+G +
Sbjct: 156 --------------------------IDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYED 189
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL M M S LKPD FTL+S L + + GK+IH Y+IR D+ +G++L+
Sbjct: 190 ALRMVREM-GTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLV 248
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
YAK +E ++ R+F L RD ++W
Sbjct: 249 DMYAKSARIEDSE---------------------------------RVFSHLYRRDSISW 275
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+++ GY QNG +A+ LFR MV +P S+++ + LA+L GKQ+H LR
Sbjct: 276 NSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 335
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G ++ +++AL+ MYSK GNI AAR++F+ ++ E VSWT++I+ A HG G EA+
Sbjct: 336 GGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDE-VSWTAIIMGHALHGHGHEAVS 394
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LFE M G+KP+ + +V VLTAC+H GLV++ Y+N M V+ + H+A++ DLL
Sbjct: 395 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 454
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L+EAY+FI M +EP W +LLS+C VHKNL+L + AEK+ I+ +N GAY
Sbjct: 455 GRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYV 514
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
+CN+Y+S G+W++ A +R ++ G++K SW++++NK H F D HP D I
Sbjct: 515 LMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINE 574
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ + +++++ G+V DT+ VLHDV+E+ K ++L HSE+LA+AFG+I+T TT+R+ K
Sbjct: 575 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 634
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
N+R+C DCH AIKFI K+ +REI+VRD +RFHHF +G CSC DYW
Sbjct: 635 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 209/478 (43%), Gaps = 97/478 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH I++ G+ ++ N+LMN Y+K I +KV
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKV--------------------- 162
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
F LMP +D VS+ T+I Y + G +++A+RM EM + P FT++SV
Sbjct: 163 ----------FELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSV 212
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + D+ GK++H +V++ G+ V + +SL++MYAK ++ VF + ++
Sbjct: 213 LPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDS 272
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SWN +V+ ++ +GR + A F QM+ V
Sbjct: 273 ISWNSLVAGYVQNGRYNEALRLFRQMVSAKV----------------------------- 303
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+P +S + ACA+L L LGKQ+H Y++R F + +AL+ Y+K G ++
Sbjct: 304 ---RPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQ- 359
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AR+IFD + D V+WTA+++G+ +G
Sbjct: 360 --------------------------------AARKIFDRMNLHDEVSWTAIIMGHALHG 387
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVS 450
+AV LF M R+G KPN A+L+ S + +D S + G L
Sbjct: 388 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 447
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
A+ + +AG + A + + W++++ + + H E A ++ E++ +
Sbjct: 448 AAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTI 505
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 191/390 (48%), Gaps = 49/390 (12%)
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+S ++V+S++ + L A F + V+ W S+I ++ AL F M +
Sbjct: 40 TSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEM-RA 98
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S PD S L +C + L+ G+ +H +I+R D GNAL++ Y+K+ G++
Sbjct: 99 SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDS 158
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+K+ F+ + +DVV++ ++ GY Q+G
Sbjct: 159 VRKV---------------------------------FELMPRKDVVSYNTVIAGYAQSG 185
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ +DA+ + R M KP+ +TLS++L + S + GK+IH +R G S + + +
Sbjct: 186 MYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGS 245
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+L+ MY+K+ I + RVF+ + +R++++SW S++ Q+G EA++LF +M+ ++
Sbjct: 246 SLVDMYAKSARIEDSERVFSHL-YRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVR 304
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMM------KNVHKIKPTPSHFASMVDLLGRAGL 565
P + + V+ AC H + G++ + + +N+ +++VD+ + G
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIA-------SALVDMYSKCGN 357
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+Q A + M L D V+W +++ +H
Sbjct: 358 IQAARKIFDRMNLH-DEVSWTAIIMGHALH 386
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 195/439 (44%), Gaps = 57/439 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H +I+ G+ V++ +SL++ YAK+ I +++VF + + SWN++++ Y +
Sbjct: 225 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ 284
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR YNE A+R+F +MV +V P +SV
Sbjct: 285 NGR-------------------------YNE------ALRLFRQMVSAKVRPGAVAFSSV 313
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C L L GK++H +V++ G + + ++L++MY+K G+ A+ +FD M L +
Sbjct: 314 IPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDE 373
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
SW ++ H G A + F++M + V V + +++ S G EA G F +
Sbjct: 374 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 433
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M K L + A+ KL ++ + +I + + TG V + L+S +
Sbjct: 434 MTKVYGLNQELEHYAAVADLLGRAGKL---EEAYDFISKMRVEPTGSVWSTLLSSCSVHK 490
Query: 328 GVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIF-----DSLRDRDVVAWT 381
+E+A+K+ E+ I N+ A+ + + Y G ++ LR + +W
Sbjct: 491 NLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWI 550
Query: 382 AM------LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
M V +++ + D + F V E + Y V+ + L + H
Sbjct: 551 EMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGY-------VADTSGVLHDVDEEH 603
Query: 436 ASALRSGEASSLSVSNALI 454
L G + L+V+ +I
Sbjct: 604 KRELLFGHSERLAVAFGII 622
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H +++ G ++F+ ++L++ Y+K +I A+K+FD M + SW I+ +A
Sbjct: 325 LGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHA 384
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
G A +F M + + V++ ++ + +G A F M + L +
Sbjct: 385 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 444
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+ +A LG ++ + F+ K + +V ++LL+
Sbjct: 445 EHYAAVADL--LGRAGKLEEAYDFISKMRVEPTGSVWSTLLS 484
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 38/259 (14%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+ ++ + + S KQ+HA +R+ S S S +I++Y+ ++ A VF +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLVFKTLE 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT--------- 525
++W S+I L A+ F M G PDH + VL +CT
Sbjct: 67 -SPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 526 --HGGLVE--------QGQRYYNM---------MKNVHKIKPTPS--HFASMVDLLGRAG 564
HG +V G NM ++ V ++ P + +++ ++G
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSG 185
Query: 565 LLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY-- 619
+ ++A + M L+PD S+L + ++ GK ++ + +S Y
Sbjct: 186 MYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGK-EIHGYVIRKGIDSDVYIG 244
Query: 620 SALCNLYSSCGKWEDAANI 638
S+L ++Y+ + ED+ +
Sbjct: 245 SSLVDMYAKSARIEDSERV 263
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/753 (36%), Positives = 434/753 (57%), Gaps = 68/753 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTE--SISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
VH + IK GL+ + L+N +M F E YA+++FDE+P L
Sbjct: 37 VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNL------------- 83
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
W T+I Y+ + + + +++EM++ V P ++T +
Sbjct: 84 ------------------FIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
T L G+++H V+K GL V V +L+ MY
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMY---------------------- 163
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+ G+LD AR FD + DV+TWN +I+ Y++ G E+ +F +++D
Sbjct: 164 ---------LLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFL-VMEDK 213
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+ P TL LSAC+ L+ L+ GK++H+Y+ + ++ + NA+I YA G ++ A
Sbjct: 214 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 273
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
I ++ ++I++TT++ G+ +G+I AR FD + ++D V+WTAM+ GY ++
Sbjct: 274 LGIFR--SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 331
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
K+A+ELFR+M KP+ +T+ ++L+ + L +L+ G+ I R+ + L V NA
Sbjct: 332 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 391
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MY K G+++ A +F + R + +WT+MIV LA +G GE+A+ +F ML+ I P
Sbjct: 392 LIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILP 450
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D ITY+GVL+ACTH GLV++G++Y+ M + H I+P +H+ +VDLL RAG L+EAY
Sbjct: 451 DEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEV 510
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
IENMP++ + + WG+LL+ CRV++ D+ ++ +++L +EPDN Y LCN+Y++C +W
Sbjct: 511 IENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRW 570
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
D +R+ M G+KKT G S +++ +VH F D HPQ I K+ K+ ++K
Sbjct: 571 NDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLA 630
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+ PD + V D+ E+ KE + HSEKLAIAFGLI++P T+RI KNLR+C DCH+
Sbjct: 631 GYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMA 690
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + K+ +RE++VRD TRFHHFK GLCSC+DYW
Sbjct: 691 KLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 169/341 (49%), Gaps = 40/341 (11%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + K ++ GK VH+ + C + ++ L+N++++ YA + A +F M +
Sbjct: 225 VLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 284
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ SW TI+S + G +D+A F+ MP +D VSWT +I Y RFK A+ +F M
Sbjct: 285 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 344
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V P +FT+ SVL +C LG L G+ + +++ + + + V N+L++MY K GD
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD--- 401
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+D A + F +M +RD TW +MI G + NG+
Sbjct: 402 ----------------------------VDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 433
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-TEFDATGPV-- 315
+AL MF+NMLK +S+ PD+ T LSAC + + G++ Y +R T P
Sbjct: 434 EKALDMFSNMLK-ASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEPNIA 489
Query: 316 -GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
L+ A+ G ++ A +++E I N I + LL G
Sbjct: 490 HYGCLVDLLARAGRLKEAYEVIENMPIK-ANSIVWGALLAG 529
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 13/233 (5%)
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS--KAGNINAARRVFNLIHW 475
++S+ + S+D +Q+H A++ G ++ + N ++T + G+ ARR+F+ I
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP- 79
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
W +MI ++ + + L+ ML G+KPD T+ + T +E G++
Sbjct: 80 EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 139
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ + H ++ ++V + G L A + P + DV+ W ++SA
Sbjct: 140 LHGHVLK-HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP-KADVITWNMIISAYN-- 195
Query: 596 KNLDLGKI-AAEKLLLIEPDNS--GAYSALCNLYSSCGKWEDAANIRKSMKYV 645
+GK + +L L+ D L + S+C K +D +K YV
Sbjct: 196 ---KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 269/750 (35%), Positives = 439/750 (58%), Gaps = 51/750 (6%)
Query: 39 IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLA 98
+ K G + +++ + + ++ +A K F ++ T+ N++L+ YAK +D A
Sbjct: 188 LTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHA 247
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
E+F MP RD VSW ++ ++ GR + A+ + V+M V T TS L +C L
Sbjct: 248 LELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKL 307
Query: 159 GDLSAGKKVHSFVVKTGLSGCVN--VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
L GK++H+ V+++ C++ V ++++ +YAK G A+ VF +R
Sbjct: 308 SSLGWGKQLHAQVIRS--LPCIDPYVASAMVELYAKCGCFKEARRVFSSLR--------- 356
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+R+ V+W +I G+ Q G E+L +F N ++ +
Sbjct: 357 ----------------------DRNTVSWTVLIGGFLQYGCFSESLELF-NQMRAELMTV 393
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D+F LA+ +S C+N + L +Q+H+ +++ + N+LIS YAK G ++ A+ I
Sbjct: 394 DQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIF 453
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
S + +++++T +L Y ++G+IG AR FD + R+V+ W AML Y Q+G +D
Sbjct: 454 --SSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDG 511
Query: 397 VELFRSMVREGPK-PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
++++ +M+ E P+ T + + + + G QI ++ G SV NA+IT
Sbjct: 512 LKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVIT 571
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK G I+ AR++F+ + R++ VSW +MI +QHG+G++AI++F+ ML+ G KPD+I
Sbjct: 572 MYSKCGRISEARKIFDFLS-RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYI 630
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
+YV VL++C+H GLV++G+ Y++M+K H + P HF+ MVDLL RAG L EA N I+
Sbjct: 631 SYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDE 690
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP++P WG+LLSAC+ H N +L ++AA+ L ++ +SG Y L +Y+ GK D+
Sbjct: 691 MPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDS 750
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
A +RK M+ G+KK G+SW++++NKVHVF ED HPQ AI K+ ++ ++I ++G+V
Sbjct: 751 AQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYV 810
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
E ++ ++ HHSEKLA+AFG+++ P + IMKNLR+C DCH+ IK I
Sbjct: 811 R---------TESLRSEI--HHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLI 859
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ RE V+RDA RFHHFK G CSC DYW
Sbjct: 860 STVTGREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/604 (26%), Positives = 288/604 (47%), Gaps = 72/604 (11%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF-DEMPVKTLCSWNTILSAYAKQGR 94
H R++ GL +VFL+N+L++ Y ++ A+ + ++ + + N +++ YAK G
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLA 153
L A E+F MP RD SW T++ Y + GRF +A+ FV M + LP FT +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC ALG ++ + K G G +V +++M+ + G A F + V
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
N +++ + S +D A F+ M ERDVV+WN M++ SQ+G EAL + +M +
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDM-HNRG 289
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
++ D T S+L+ACA L L GKQ+HA +IR+ V +A++ YAK G + A+
Sbjct: 290 VRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEAR 349
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
++ S + N +++T L+ G++ Q G
Sbjct: 350 RVF--SSLRDRNTVSWTVLIGGFL-------------------------------QYGCF 376
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+++ELF M E + + L+ ++S S+ + +Q+H+ +L+SG ++ +SN+L
Sbjct: 377 SESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSL 436
Query: 454 ITMYSKAGNINAARRVF------NLIHW------------------------RQETVSWT 483
I+MY+K GN+ A +F +++ W + ++W
Sbjct: 437 ISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWN 496
Query: 484 SMIVALAQHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+M+ A QHG E+ ++++ ML E + PD +TYV + C G + G +
Sbjct: 497 AMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVK 556
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
V I T S +++ + + G + EA + + D+V+W ++++ H +GK
Sbjct: 557 VGLILDT-SVMNAVITMYSKCGRISEARKIFDFLS-RKDLVSWNAMITGYSQH---GMGK 611
Query: 603 IAAE 606
A E
Sbjct: 612 QAIE 615
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 250/505 (49%), Gaps = 15/505 (2%)
Query: 144 TQFTVTSVLA----SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
+ VT LA SC A G L+ + +H +V GL+ V + N+LL+ Y G A
Sbjct: 23 SHMAVTQALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDA 82
Query: 200 KAVFDG-MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+ + G + NV + N++++ + G L A F +M RDV +WN++++GY Q+G
Sbjct: 83 RGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRF 142
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
+A+ F +M + P+ FT + +C L ++ Q+ + + F V
Sbjct: 143 LDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATG 202
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
++ + + G V+ A K Q I V ++L GY K + A +F+S+ +RDVV
Sbjct: 203 IVDMFVRCGAVDFASKQFSQ--IERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVV 260
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W M+ Q+G ++A+ + M G + ++ T ++ L+ + L+SL GKQ+HA
Sbjct: 261 SWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+RS V++A++ +Y+K G ARRVF+ + R TVSWT +I Q+G E+
Sbjct: 321 IRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRN-TVSWTVLIGGFLQYGCFSES 379
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMV 557
++LF +M + D +++ C++ + ++ +++ +K+ H S+ S++
Sbjct: 380 LELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISN--SLI 437
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
+ + G LQ A + +M E D+V+W +L+A N +GK A E + N
Sbjct: 438 SMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTAYSQVGN--IGK-AREFFDGMSTRNVI 493
Query: 618 AYSALCNLYSSCGKWEDAANIRKSM 642
++A+ Y G ED + +M
Sbjct: 494 TWNAMLGAYIQHGAEEDGLKMYSAM 518
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 137/269 (50%), Gaps = 33/269 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ + +H+ +K G +V + NSL++ YAK ++ A+ +F M + + SW +L+AY+
Sbjct: 413 LARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYS 472
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTVT 149
+ G + A E F+ M R+ ++W ++ Y + G ++ ++M+ M+ ++ V+P T
Sbjct: 473 QVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYV 532
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C +G G ++ VK GL +V N+++ MY+K G A+ +FD + K
Sbjct: 533 TLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRK 592
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ SWN +MI GYSQ+G +A+ +F +ML
Sbjct: 593 DLVSWN-------------------------------AMITGYSQHGMGKQAIEIFDDML 621
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGK 298
K + KPD + + LS+C++ ++ GK
Sbjct: 622 KKGA-KPDYISYVAVLSSCSHSGLVQEGK 649
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/715 (37%), Positives = 422/715 (59%), Gaps = 37/715 (5%)
Query: 31 VGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
V VH I+K L FL N L+ YAK+ ++ A++VFDEMP L + N +LSA
Sbjct: 30 VAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSAL 89
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTV 148
A + +F MP RD+VS+ +I ++ G +++++ +++++ V PT+ T+
Sbjct: 90 AHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITL 149
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++++ +AL D + G VH V++ G V + L++MYAK+G A+ VF M
Sbjct: 150 SAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEA 209
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K V +N +++ + ++ A+ F M++RD +TW +M+ G +QNG EAL +F M
Sbjct: 210 KTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM 269
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + D++T S L+AC L L+ GKQIHAYI RT ++ VG+AL+
Sbjct: 270 -RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALV-------- 320
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
D Y K I A +F + R++++WTAM+VGY
Sbjct: 321 -------------------------DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYG 355
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QN +++AV F M +G KP+++TL +++S ++LASL+ G Q H AL SG ++
Sbjct: 356 QNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYIT 415
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
VSNAL+T+Y K G+I A R+F+ + + + VSWT+++ AQ G +E I LFE+ML
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALVTGYAQFGKAKETIDLFEKMLAN 474
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+KPD +T++GVL+AC+ GLVE+G Y++ M+ H I P H+ M+DL R+G +E
Sbjct: 475 GLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKE 534
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI+ MP PD W +LLS+CR+ N+++GK AAE LL +P N +Y LC+++++
Sbjct: 535 AEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAA 594
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W + A++R+ M+ VKK G SW++ +NKVH+F +D HP IY K+ + +
Sbjct: 595 KGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSK 654
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ E G+ PD +SVLHDV + K M+ HHSEKLAIAFGLI P+ +RI+KNLR
Sbjct: 655 MAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/697 (38%), Positives = 419/697 (60%), Gaps = 72/697 (10%)
Query: 92 QGRLDL--ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+G LD+ A VF+ M +++ V+WT +I Y+++G +A+ +F ++ + P +FT+T
Sbjct: 193 KGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLT 252
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L++C L S GK++HS+V+++GL+ V V +L++MYAK
Sbjct: 253 SLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAK----------------- 295
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
S ++ +R F+ M+ +V++W ++I+GY Q+ + EA+ +F NML
Sbjct: 296 --------------SAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNML 341
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ P+ FT +S L ACA+L +GKQ+H I+ VGN+LI+ YA+
Sbjct: 342 H-GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARS--- 397
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
G + AR+ F+ L +++++++ +
Sbjct: 398 ------------------------------GTMECARKAFNILFEKNLISYN---TAADA 424
Query: 390 NGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
N D+ E F V G + +T + +LS ++ + ++ G+QIHA ++SG ++L
Sbjct: 425 NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLC 484
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++NALI+MYSK GN AA +VFN + +R ++WTS+I A+HG +A++LF MLE+
Sbjct: 485 INNALISMYSKCGNKEAALQVFNDMGYRN-VITWTSIISGFAKHGFATKALELFYEMLEI 543
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+KP+ +TY+ VL+AC+H GL+++ +++N M H I P H+A MVDLLGR+GLL E
Sbjct: 544 GVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLE 603
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI +MP + D + W + L +CRVH+N LG+ AA+K+L EP + Y L NLY+S
Sbjct: 604 AIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYAS 663
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W+D A +RKSMK + K G+SW+++ N+VH F V D HPQ IY+++ ++ +
Sbjct: 664 EGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALK 723
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IK +G++P+T VLHDVE++ KEQ L HSEK+A+A+ LISTP+ +R+ KNLRVC DC
Sbjct: 724 IKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDC 783
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+AIK+I + REIVVRDA RFHH K G CSC DYW
Sbjct: 784 HTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 154/596 (25%), Positives = 271/596 (45%), Gaps = 116/596 (19%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
SPL + LL++ ++S N +GKL+H ++I GL L L NSL+ Y+K
Sbjct: 37 SPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGD------- 89
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
W LS + G RD VSW+ II + A+
Sbjct: 90 -----------WENALSIFRNMGH-----------HKRDLVSWSAIISCFANNSMESRAL 127
Query: 131 RMFVEMVQ---DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSL 186
F+ M+Q + + P ++ T++L SC+ + G + +F++KTG V V +L
Sbjct: 128 LTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCAL 187
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++M+ K G ++ + AR FD+M +++VTW
Sbjct: 188 IDMFTKGGLDIQS------------------------------ARMVFDKMQHKNLVTWT 217
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
MI YSQ G +A+ +F +L S PDKFTL S LSAC LE LGKQ+H+++IR
Sbjct: 218 LMITRYSQLGLLDDAVDLFCRLLV-SEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIR 276
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ G + + C TL+D Y K + +R
Sbjct: 277 S-----GLASDVFVGC----------------------------TLVDMYAKSAAVENSR 303
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+IF+++ +V++WTA++ GY Q+ ++A++LF +M+ PN +T S++L +SL
Sbjct: 304 KIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLP 363
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
GKQ+H ++ G ++ V N+LI MY+++G + AR+ FN++ + + +S+ +
Sbjct: 364 DFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNIL-FEKNLISYNTAA 422
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A A+ +E+ + G+ TY +L+ G + +G++ + ++
Sbjct: 423 DANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALI------ 474
Query: 547 KPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
S F + ++ + + G + A +M +V+ W S++S H
Sbjct: 475 --VKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR-NVITWTSIISGFAKH 527
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 31/128 (24%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA I+K G ++ + N+L++ Y+K + A +VF++M + + +W +I+S +AK
Sbjct: 467 GEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAK 526
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A+ +F EM++ V P + T +V
Sbjct: 527 HGFA-------------------------------TKALELFYEMLEIGVKPNEVTYIAV 555
Query: 152 LASCTALG 159
L++C+ +G
Sbjct: 556 LSACSHVG 563
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 293/767 (38%), Positives = 439/767 (57%), Gaps = 61/767 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTL---CSWNTILSA 88
G H I G +VF+ N+L+ Y+++ S+ A VFDE+ K + SWN+I++A
Sbjct: 168 GSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAA 227
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
+ K A ++F+ M T IV + I ++
Sbjct: 228 HVKGSNPRTALDLFSEM---------TTIVHEKATNERSDII----------------SI 262
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L +C +L L K++HS+ ++ G V N+L++ YAK G A VF+ M
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGM 264
K+V SWN +V+ + SG+ A F M I DV+TW+++IAGY+Q GY EAL
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M+ S +P+ T+ S LSACA+L L G + HAY ++ L+S
Sbjct: 383 FQQMILYGS-EPNSVTIISLLSACASLGALSQGMETHAYSLK----------KCLLSLDN 431
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTA 382
GG + +V + L+D Y K AR IF+S+ R+R+VV WT
Sbjct: 432 DFGGDGDGEDLVVHNA-----------LIDMYSKCRSFKAARTIFNSIPRRERNVVTWTV 480
Query: 383 MLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
M+ GY Q G + DA++LF M+ + PN YT+S +L + L+SL GKQIHA R
Sbjct: 481 MIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR 540
Query: 441 --SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
E+S V+N LI MYSK G+++ AR VF+ + R E VSWTSM+ HG G+EA
Sbjct: 541 HHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNE-VSWTSMMSGYGMHGRGKEA 599
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ +F++M + G PD I+++ +L AC+H G+V+QG Y+++M++ + + + H+A ++D
Sbjct: 600 LDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVID 659
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LL R+G L +A+ I+ MP+EP W +LLSACRVH N++L + A KL+ ++ +N G+
Sbjct: 660 LLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGS 719
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y+ + N+Y++ +W+D A IR+ MK G+KK G SWVQ + F V D HP I
Sbjct: 720 YTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEI 779
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y+ + ++ IK MG+VP+T LHDV+++ K +L HSEKLA+A+GL++T +RI
Sbjct: 780 YSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRI 839
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCHSA +I K+VD EI+VRD++RFHHFK G CSC YW
Sbjct: 840 TKNLRVCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 190/724 (26%), Positives = 330/724 (45%), Gaps = 102/724 (14%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+SP F A LL+ + R+ + +H +II GL +++ A S+S
Sbjct: 29 VSPTHF-ASLLK---ECRSVNTVRQIHQKIIAYGL----------LSYPASLLSVS---- 70
Query: 70 VFDEMPVKTLCSWNT----ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+P + S + ++++Y G A V + +V W ++ + E GR
Sbjct: 71 -LPPLPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGR 129
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
AI + M++ P FT+ L +C L +G H + G V V N+
Sbjct: 130 LDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNA 189
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+ MY++ G A VFD ++ R D +I +W
Sbjct: 190 LVAMYSRSGSLEDASLVFD-----------------------EITRKGIDDVI-----SW 221
Query: 246 NSMIAGYSQNGYDFEALGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
NS++A + + AL +F+ M K ++ + D ++ + L ACA+L+ L K+I
Sbjct: 222 NSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEI 281
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H+Y IR A V NALI YAK G ++ A + + + +V+++ ++ GY + G
Sbjct: 282 HSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV--MEFKDVVSWNAMVTGYTQSG 339
Query: 361 DIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
G A +F ++R DV+ W+A++ GY Q G ++A++ F+ M+ G +PN+ T+
Sbjct: 340 KFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTII 399
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEAS------------SLSVSNALITMYSKAGNIN 464
++LS +SL +L G + HA +L+ S L V NALI MYSK +
Sbjct: 400 SLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFK 459
Query: 465 AARRVFNLIHWRQE-TVSWTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITYVGVL 521
AAR +FN I R+ V+WT MI AQ+G +A++LF M+ + P+ T +L
Sbjct: 460 AARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCIL 519
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEP 580
AC H + G++ + + H+ + + A+ ++D+ + G + A N ++MP +
Sbjct: 520 MACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP-KR 578
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE-----PDNSGAYSALCNLYSSCGKWEDA 635
+ V+W S++S +H GK A + ++ PD+ S L LY+ +
Sbjct: 579 NEVSWTSMMSGYGMHGR---GKEALDIFDKMQKAGFVPDD---ISFLVLLYAC----SHS 628
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+ + + Y + ++ + I + H V D L A ++ K W I+EM
Sbjct: 629 GMVDQGLDYFDIMRSD---YGVIASAQHYACVIDLL-----ARSGRLDKAWKTIQEMPME 680
Query: 696 PDTA 699
P A
Sbjct: 681 PSAA 684
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/578 (21%), Positives = 236/578 (40%), Gaps = 139/578 (24%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
VV+ ++ G A + ++++ V WN ++ + + G A+G+ ML+ + KP
Sbjct: 89 VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLR-AGTKP 147
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D FTL L AC L + G H I F++ V NAL++ Y++ G +E A +
Sbjct: 148 DHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVF 207
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++ R+ D DV++W +++ + + + A
Sbjct: 208 DEI-------------------------TRKGID-----DVISWNSIVAAHVKGSNPRTA 237
Query: 397 VELFRSMVR------EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
++LF M + + ++ +L +SL +L K+IH+ A+R+G + V
Sbjct: 238 LDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVC 297
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQ--------------------------------- 477
NALI Y+K G++ A VFN++ ++
Sbjct: 298 NALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIP 357
Query: 478 -ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ ++W+++I AQ G G+EA+ F++M+ G +P+ +T + +L+AC G + QG
Sbjct: 358 LDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMET 417
Query: 537 --YNMMKNVHKIKPTPSHFA---------SMVDLLGRAGLLQEAYNFIENMP-LEPDVVA 584
Y++ K + + +++D+ + + A ++P E +VV
Sbjct: 418 HAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVT 477
Query: 585 W-------------------------------------GSLLSACRVHKNLDLGK-IAAE 606
W +L AC +L +GK I A
Sbjct: 478 WTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAY 537
Query: 607 KLLLIEPDNSGAYSALC--NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
E ++S + A C ++YS CG + A N+ SM K SW + + +
Sbjct: 538 VTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM-----PKRNEVSWTSMMSGYGM 592
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
G ++A+ I+D++++ GFVPD S L
Sbjct: 593 HG------RGKEAL-----DIFDKMQKAGFVPDDISFL 619
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 294/781 (37%), Positives = 436/781 (55%), Gaps = 75/781 (9%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L+ + +LL++ + R+ GK +HA K + S +L N Y+K S+ A+ FD
Sbjct: 9 LQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFD 68
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
+ S+NT+++AYAK + LA +VF+ +P D VS+ T+I Y + G + A+R+
Sbjct: 69 LTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRL 128
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F E+ + + FT++ V+ +C D+ +++H FVV G +V N++L Y++
Sbjct: 129 FAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSR 186
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE---RDVVTWNSMI 249
G L+ AR F +M E RD V+WN+MI
Sbjct: 187 -------------------------------KGFLNEARRVFREMGEGGGRDEVSWNAMI 215
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
Q+ EA+ +F M++ LK D FT+AS L+A ++ L G Q H +I++ F
Sbjct: 216 VACGQHREGLEAVELFREMVR-RGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGF 274
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
VG+ LI Y+K G +VE R++F
Sbjct: 275 HGNSHVGSGLIDLYSKCAG-----GMVE---------------------------CRKVF 302
Query: 370 DSLRDRDVVAWTAMLVGYEQ-NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
+ + D+V W M+ G+ Q L++D + FR M G P++ + + S S+L+S
Sbjct: 303 EEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSP 362
Query: 429 DHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
GKQ+HA A++S + +SV+NAL+ MYSK GN++ ARRVF+ + VS SMI
Sbjct: 363 SVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP-EHNMVSLNSMIA 421
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQHG+ E+++LFE ML+ I P+ IT++ VL+AC H G VE+GQ+Y+NMMK +I+
Sbjct: 422 GYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIE 481
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H++ M+DLLGRAG L+EA IE MP P + W +LL ACR H N++L AA +
Sbjct: 482 PEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANE 541
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L +EP N+ Y L N+Y+S +WE+AA +++ M+ GVKK G SW++I KVHVF
Sbjct: 542 FLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVA 601
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL---HDVEEDVKEQMLRHHSEKLAIA 724
ED HP I+ M +I ++K+ G+VPD L +VE D KE+ L +HSEKLA+A
Sbjct: 602 EDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVA 661
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
FGLIST E + ++KNLR+C DCH+AIK I + REI VRD RFH FK+G CSC DY
Sbjct: 662 FGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDY 721
Query: 785 W 785
W
Sbjct: 722 W 722
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/758 (36%), Positives = 433/758 (57%), Gaps = 71/758 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNF---YAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ F + + YA VF+ + L WNT+ +
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS AI+++V M+ +LP +T
Sbjct: 79 AL---------------SSDPVS----------------AIKLYVCMISLGLLPNSYTFP 107
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L SC L G+++H V+K G + V SL++MY K G A VFDG +
Sbjct: 108 FLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHR 167
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ +++ + G ++ A+ FD++ +DVV+WN++I+GY+ G + EAL +F M+
Sbjct: 168 DVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMM 227
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K +++KPD+ T+ + +SACA ++LG+Q+H++I + + NALI Y+K
Sbjct: 228 K-TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKC--- 283
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
G++ A +F L ++DV++W M+ GY
Sbjct: 284 ------------------------------GEVETACGLFQGLSNKDVISWNTMIGGYTH 313
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH + G ++
Sbjct: 314 LNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNAS 373
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S+ +LI MY+K G+I AA +VFN +H R + + +MI A HG A +F RM +
Sbjct: 374 SLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLS-ACNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI+PD IT+VG+L+AC+H G+++ G+R + M +KI P H+ M+DLLG GL +
Sbjct: 433 NGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFK 492
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I M +EPD V W SLL AC++H N++LG+ A+KL+ IEP+N G+Y L N+Y+
Sbjct: 493 EAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYA 552
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G+W + ANIR + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 553 TAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++E GFVPDT+ VL ++EE+ K+ LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH A K I K+ REI+ RD TRFHHF+ G+CSC DYW
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 231/489 (47%), Gaps = 67/489 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S K + G+ +H ++K G L +++ SL++ Y K A KVFD
Sbjct: 106 FPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSS 165
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G ++ A ++F+ +P +D VSW II Y + G K A+ +F E
Sbjct: 166 HRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKE 225
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +V+++C G + G++VHS++ GL + + N+L+++Y+K G+
Sbjct: 226 MMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGE 285
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F G+ K+V SW N+MI GY+
Sbjct: 286 VETACGLFQGLSNKDVISW-------------------------------NTMIGGYTHL 314
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F ML+ S P+ T+ S L ACA L + G+ IH YI +
Sbjct: 315 NLYKEALLLFQEMLR-SGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK--------- 364
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
++ GV A + T+L+D Y K GDI A ++F+S+ R
Sbjct: 365 ---------RIKGVTNASSLR-------------TSLIDMYAKCGDIEAAHQVFNSMHHR 402
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ A AM+ G+ +G A ++F M + G +P++ T +LS S LD G++I
Sbjct: 403 TLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIF 462
Query: 436 ASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
S ++ + + L +I + G A + N + + V W S++ A HG
Sbjct: 463 RSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGN 522
Query: 494 --LGEEAIQ 500
LGE Q
Sbjct: 523 VELGESFAQ 531
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/691 (38%), Positives = 408/691 (59%), Gaps = 66/691 (9%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+D A +F + DS ++ +I + AI +F EM ++ V P +FT +L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C+ L LS G+++H+ ++K G V N+L++MYA G+
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGE------------------- 174
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+++AR FD+M ER+V TWNSM AGY+++G E + +F ML + +
Sbjct: 175 ------------VEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEML-ELDI 221
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+ D+ TL S L+AC L L+LG+ I+ Y
Sbjct: 222 RFDEVTLVSVLTACGRLADLELGEWINRY------------------------------- 250
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
VE+ G+ N T+L+D Y K G + ARR+FD + RDVVAW+AM+ GY Q +
Sbjct: 251 -VEEKGLKG-NPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCR 308
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A++LF M + PN T+ ++LS + L +L+ GK +H + ++++ AL+
Sbjct: 309 EALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALM 368
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
Y+K G++ ++ VF + + +SWT +I LA +G G++A++ F MLE ++P+
Sbjct: 369 DFYAKCGSVESSIEVFGKMPVKN-VLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPND 427
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+T++GVL+AC+H GLV++G+ + M I+P H+ MVD+LGRAGL++EA+ FI+
Sbjct: 428 VTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIK 487
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
NMP++P+ V W +LL++C+VHKN+++G+ + ++L+++EP +SG Y L N+Y+S G+WED
Sbjct: 488 NMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWED 547
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A +R MK G+KKT G S +++ +H F ED +H Q + IYN + + +IK G+
Sbjct: 548 ALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGY 607
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VP+TA D EED KE + HHSEKLAIAFGLI +P TT+RI KNLRVC DCH+A K
Sbjct: 608 VPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKL 667
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K+ +REIVVRD TRFHHFK+G CSC DYW
Sbjct: 668 VSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 243/560 (43%), Gaps = 119/560 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA I+KCG F+KN+L++ YA
Sbjct: 143 GEQIHALIMKCGFGSHGFVKNTLIHMYANC------------------------------ 172
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +++A VF+ M R+ +W ++ Y + G ++ +++F EM++ + + T+ SV
Sbjct: 173 -GEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSV 231
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L DL G+ ++ +V + GL G + SL++MYAK G A+ +FD M ++V
Sbjct: 232 LTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDV 291
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+W ++MI+GYSQ EAL +F M K
Sbjct: 292 VAW-------------------------------SAMISGYSQASRCREALDLFHEMQK- 319
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+++ P++ T+ S LS+CA L L+ GK +H +I + T +G AL+ YAK G VE
Sbjct: 320 ANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVE- 378
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
S I +F + ++V++WT ++ G NG
Sbjct: 379 -------SSI-------------------------EVFGKMPVKNVLSWTVLIQGLASNG 406
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVS 450
K A+E F M+ + +PN+ T +LS S +D G+ + S R G +
Sbjct: 407 QGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHY 466
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAI-QLFERML 506
++ + +AG I A + + + V W +++ + H +GEE++ QL +L
Sbjct: 467 GCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLI--IL 524
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
E D+I + + G E + MK IK TP S+++L G
Sbjct: 525 EPTHSGDYILLSNIYASV---GRWEDALKVRGEMKE-KGIKKTPG--CSLIELDGVIHEF 578
Query: 567 ----------QEAYNFIENM 576
+E YN IE+M
Sbjct: 579 FAEDNVHSQSEEIYNAIEDM 598
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/694 (39%), Positives = 411/694 (59%), Gaps = 38/694 (5%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQVLPTQFTVTSVLA 153
LD A +VF+ +P+ + +W T+I Y ++ +F+ M+ Q P +FT ++
Sbjct: 85 LDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIK 144
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+ + L +L GK H V+K L V + NSL++ YAK G+
Sbjct: 145 AASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGE------------------ 186
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
L L F + RDVV+WNSMI + Q G EAL +F M + +
Sbjct: 187 -------------LGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM-ETQN 232
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+KP+ T+ LSACA + G+ +H+YI R + + NA++ Y K G VE A+
Sbjct: 233 VKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAK 292
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
++ ++ + +++++TT+L GY KIG+ A+ IFD++ ++D+ AW A++ YEQ G
Sbjct: 293 RLFDK--MPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKP 350
Query: 394 KDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
K+A+ELF + + + KP+ TL + LS + L ++D G IH + G + ++ +
Sbjct: 351 KEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTS 410
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MY K G++ A VF+ + R++ W++MI LA HG G++AI LF +M E +KP
Sbjct: 411 LIDMYCKCGDLQKALMVFHSVE-RKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKP 469
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+ +T+ +L AC+H GLVE+G+ ++N M+ V+ + P H+A MVD+LGRAGLL+EA
Sbjct: 470 NAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVEL 529
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
IE MP+ P WG+LL AC +H+N+ L + A +L+ +EP N GAY L N+Y+ GKW
Sbjct: 530 IEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKW 589
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+ + +RK M+ VG+KK G S +++ VH F V D HP IY K+ +I ++ +
Sbjct: 590 DRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETI 649
Query: 693 GFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+VP+ + +L V EEDVKEQ L HSEKLAIAFGLIST ++ +RI+KNLRVC DCHS
Sbjct: 650 GYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSV 709
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + KL DREI++RD RFHHF++G CSC DYW
Sbjct: 710 AKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 232/524 (44%), Gaps = 102/524 (19%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
++P+ P + + L+++ + F GK H +IK L VF+ NSL++FY
Sbjct: 129 QSPDFPDKFT----FPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFY--- 181
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
AK G L L VF +P RD VSW ++I +
Sbjct: 182 ----------------------------AKCGELGLGYRVFVNIPRRDVVSWNSMITAFV 213
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ G + A+ +F EM V P T+ VL++C D G+ VHS++ + + +
Sbjct: 214 QGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLT 273
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
++N++L+MY K G AK +FD M K++ SW ++ + G D A+ FD M +D
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQD 333
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+ WN++I+ Y Q G EAL +F + + KPD+ TL STLSACA L + LG IH
Sbjct: 334 IAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIH 393
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
YI ++ G+ LN T+L+D Y K GD
Sbjct: 394 VYI--------------------------------KKQGMK-LNCHLTTSLIDMYCKCGD 420
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A +F S+ +DV W+AM+ G +G KDA+ LF M + KPN T + +L
Sbjct: 421 LQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCA 480
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S + ++ G+ N V+ ++ +
Sbjct: 481 CSHVGLVEEGRTF----------------------------FNQMELVYGVLPGVKH--- 509
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
+ M+ L + GL EEA++L E+M + P + +L ACT
Sbjct: 510 YACMVDILGRAGLLEEAVELIEKM---PMAPAASVWGALLGACT 550
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 393 NKDAVELFRSMVREGPKPNNYTLS--------AMLSVSSSLASLDHGKQIHASALRSG-- 442
N V L RS P PN+ TL+ LS+ + KQIHA LR+G
Sbjct: 5 NPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF 64
Query: 443 ----EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
AS L + AL S +++ A++VF+ I +W ++I A A ++
Sbjct: 65 FDPFSASRLITAAAL----SPFPSLDYAQQVFDQIP-HPNLYTWNTLIRAYASSSNPHQS 119
Query: 499 IQLFERMLELGIK-PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
+ +F RML PD T+ ++ A + + G+ ++ M+ V + S++
Sbjct: 120 LLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKV-LLGSDVFILNSLI 178
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ G L Y N+P DVV+W S+++A
Sbjct: 179 HFYAKCGELGLGYRVFVNIPRR-DVVSWNSMITA 211
>gi|296082479|emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/566 (46%), Positives = 366/566 (64%), Gaps = 84/566 (14%)
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
GK IHA II+ + N L++ YAK G + A ++ ++ + +V ++ +L GY
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVK--SVFSWNIILSGY 89
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
K G + A R+F+ + + D V+WTAM+VGY Q G ++A+ +FR MV + P +TL+
Sbjct: 90 AKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLT 149
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN-------------- 462
+L+ +++ L G+++H+ ++ G +S +SV+N+L+ MY+K+G+
Sbjct: 150 NVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLK 209
Query: 463 -----------------INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
IN ARR+F+ + R + V+WT+MIV Q+G ++A++LF M
Sbjct: 210 STSTFTALLDGYVKLGDINPARRIFDSLRVR-DVVAWTAMIVGYVQNGFNQDAMELFRSM 268
Query: 506 LELGIKPDHITYV-----------------------------------GVLTACTHGGLV 530
++ G KP++ T ++T G +
Sbjct: 269 IKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSI 328
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL-----------LQEAYNFIENMPLE 579
+ +N+ +H + T + + SM+ L + GL L+ A+ FIENMP+E
Sbjct: 329 NDARWVFNL---IHWKRDTIT-WTSMIIALAQHGLGEEALTLFERMLENAHAFIENMPIE 384
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
PDV+AWGSLL++C+VHKN++L ++AAE+LLLIEP+NSGAYSAL N+YS+CG+WE+AANIR
Sbjct: 385 PDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIR 444
Query: 640 KSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTA 699
KSMK GVKK QGFSWVQI+NKVH+FGV+D LHPQRDAIY MAKIW EIK+MGFVPDT
Sbjct: 445 KSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTE 504
Query: 700 SVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLV 759
SVLHD+EE++KEQ+L HHSEKLAIAFGLI TPENTTLRIMKNLRVCNDCHSAIKFI KLV
Sbjct: 505 SVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLV 564
Query: 760 DREIVVRDATRFHHFKKGLCSCRDYW 785
REI+VRDATRFHHFK GLCSCRDYW
Sbjct: 565 GREIIVRDATRFHHFKNGLCSCRDYW 590
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/405 (47%), Positives = 258/405 (63%), Gaps = 35/405 (8%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
MET + L SP + Y LQ +LK ++PF GK +HARIIK GLHL VFL N+LMNFYAK
Sbjct: 1 METSSSQILTSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAK 60
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
T I A +VFDEMPVK++ SWN ILS YAK GRL+ A VF MP DSVSWT +IV Y
Sbjct: 61 TGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGY 120
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
N++G+F+NAI MF EMV D V PTQFT+T+VLASC A+ L G+KVHSFVVK GLS +
Sbjct: 121 NQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYI 180
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+V NSLLNMYAK GD + AK VFD M+LK+ S++ ++ ++ G ++ AR FD + R
Sbjct: 181 SVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSTFTALLDGYVKLGDINPARRIFDSLRVR 240
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
DVV W +MI GY QNG++ +A+ +F +M+K+ KP+ +TLA+ LS ++L L G+QI
Sbjct: 241 DVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGP-KPNNYTLATMLSVSSSLASLDHGRQI 299
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA R+ ++ V NALI+ YAK G
Sbjct: 300 HASATRSGNASSVSVSNALITMYAKSGS-------------------------------- 327
Query: 361 DIGPARRIFDSLR-DRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
I AR +F+ + RD + WT+M++ Q+GL ++A+ LF M+
Sbjct: 328 -INDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERML 371
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/756 (37%), Positives = 421/756 (55%), Gaps = 97/756 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
VGK H+ IK G+ + L+ +L++ Y K I A + F
Sbjct: 389 LVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF------------------ 430
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
L+ E N+ V W ++V Y + + ++F +M + + P QFT
Sbjct: 431 -------LSTETENV------VLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYP 477
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +C++L + G+++H+ V+KTG V V++ L++MYAK+G
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLG--------------- 522
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+LD A F ++ E+DVV+W +MIAGY+Q+ EAL +F M
Sbjct: 523 ----------------KLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEM- 565
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+D + D AS +SACA ++ L G+QIHA + + VGNAL+S YA+ G V
Sbjct: 566 QDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKV 625
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
D Y FD + +D ++W +++ G+ Q
Sbjct: 626 R-----------------------DAYFA----------FDKIFSKDNISWNSLISGFAQ 652
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G ++A+ LF M + G + N++T +S ++++A++ GKQIHA +++G S V
Sbjct: 653 SGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEV 712
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
SN LIT+Y+K GNI+ A R F + + E +SW +M+ +QHG G +A+ LFE M +LG
Sbjct: 713 SNVLITLYAKCGNIDDAERQFFEMPEKNE-ISWNAMLTGYSQHGHGFKALSLFEDMKQLG 771
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+ P+H+T+VGVL+AC+H GLV++G +Y+ M+ VH + P P H+A +VDLLGR+GLL A
Sbjct: 772 VLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRA 831
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
F+E MP++PD + +LLSAC VHKN+D+G+ AA LL +EP +S Y L N+Y+
Sbjct: 832 RRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVT 891
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
GKW R+ MK GVKK G SW+++ N VH F D HP D IY + + +
Sbjct: 892 GKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELA 951
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
E G++P T S+L+D E K HSEKLAIAFGL+S +T + + KNLRVC DCH
Sbjct: 952 AENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCH 1011
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ IK++ K+ DR IVVRD+ RFHHFK G+CSC+DYW
Sbjct: 1012 NWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 258/509 (50%), Gaps = 68/509 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y K G L+ A +VF+ + RDSVSW ++ ++ G + A+ +F +M V
Sbjct: 209 NPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVY 268
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + +SVL++CT + G+++H V+K G S V N+L+ +Y+++G+ + A+ V
Sbjct: 269 PTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQV 328
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M++RD V++NS+I+G SQ GY +AL
Sbjct: 329 FNA-------------------------------MLQRDEVSYNSLISGLSQQGYSDKAL 357
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M D LKPD T+AS LSAC+++ L +GKQ H+Y I+
Sbjct: 358 ELFKKMCLD-CLKPDCVTVASLLSACSSVGALLVGKQFHSYAIK---------------- 400
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+G+S ++I LLD Y+K DI A F S +VV W
Sbjct: 401 ----------------AGMSS-DIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNV 443
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
MLV Y ++ ++F M EG +PN +T ++L SSL ++D G+QIH L++G
Sbjct: 444 MLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG 503
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ VS+ LI MY+K G ++ A ++F + ++ VSWT+MI AQH EA+ LF
Sbjct: 504 FQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIAGYAQHEKFAEALNLF 562
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M + GI D+I + ++AC + QGQ+ + V S ++V L R
Sbjct: 563 KEMQDQGIHSDNIGFASAISACAGIQALNQGQQIH-AQACVSGYSDDLSVGNALVSLYAR 621
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G +++AY F + D ++W SL+S
Sbjct: 622 CGKVRDAY-FAFDKIFSKDNISWNSLISG 649
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 180/702 (25%), Positives = 302/702 (43%), Gaps = 151/702 (21%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H +I+K G V L LM+ Y + A VFDEMPV+ L WN +L +
Sbjct: 90 LHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRF----- 144
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
V M R + +F M+Q++V P + T VL
Sbjct: 145 ------VAGKMAGR--------------------VLGLFRRMLQEKVKPDERTYAGVLRG 178
Query: 155 CTALGDLS--AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
C GD+ +K+H+ + G + V N L+++Y K G AK VFDG++
Sbjct: 179 CGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ----- 232
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+RD V+W +M++G SQ+G + EA+ +F M S
Sbjct: 233 --------------------------KRDSVSWVAMLSGLSQSGCEEEAVLLFCQM-HTS 265
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+ P + +S LSAC +E K+G+Q+H +++ F V NAL++ Y+++G
Sbjct: 266 GVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLG----- 320
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
N I PA ++F+++ RD V++ +++ G Q G
Sbjct: 321 ------------NFI----------------PAEQVFNAMLQRDEVSYNSLISGLSQQGY 352
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+ A+ELF+ M + KP+ T++++LS SS+ +L GKQ H+ A+++G +S + + A
Sbjct: 353 SDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGA 412
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+ +Y K +I A F L + V W M+VA E+ ++F +M GI+P
Sbjct: 413 LLDLYVKCSDIKTAHEFF-LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471
Query: 513 DHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
+ TY +L C+ V+ G++ + ++K + S + ++D+ + G L A
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKLGKLDHALK 529
Query: 572 FIENMPLEPDVVAW-----------------------------------GSLLSACRVHK 596
+ E DVV+W S +SAC +
Sbjct: 530 IFRRLK-EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQ 588
Query: 597 NLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
L+ G +I A+ + D+ +AL +LY+ CGK DA Y K FS
Sbjct: 589 ALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDA--------YFAFDKI--FSK 638
Query: 656 VQIQNKVHVFGVEDWLHPQRD-AIYNKMAKIWDEIKEMGFVP 696
I + G H + +++++M+K EI F P
Sbjct: 639 DNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGP 680
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 232/551 (42%), Gaps = 101/551 (18%)
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
N I M + V T +L C + G S G K+H ++K G V + L+
Sbjct: 51 NGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLM 110
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
++Y GD LD A FD+M R + WN
Sbjct: 111 DLYIAFGD-------------------------------LDGAVTVFDEMPVRPLSCWNK 139
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE-KLKLGKQIHAYIIR 306
++ + LG+F ML++ +KPD+ T A L C + ++IHA I
Sbjct: 140 VLHRFVAGKMAGRVLGLFRRMLQEK-VKPDERTYAGVLRGCGGGDVPFHCVEKIHARTIT 198
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
++ N+L C L+D Y K G + A+
Sbjct: 199 HGYE------NSLFVC---------------------------NPLIDLYFKNGFLNSAK 225
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
++FD L+ RD V+W AML G Q+G ++AV LF M G P Y S++LS + +
Sbjct: 226 KVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVE 285
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
G+Q+H L+ G + V NAL+T+YS+ GN A +VFN + R E VS+ S+I
Sbjct: 286 FYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE-VSYNSLI 344
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY--------- 537
L+Q G ++A++LF++M +KPD +T +L+AC+ G + G++++
Sbjct: 345 SGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMS 404
Query: 538 ----------NMMKNVHKIKPTPSHFAS-----------MVDLLGRAGLLQEAYNFIENM 576
++ IK F S M+ G L E++ M
Sbjct: 405 SDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQM 464
Query: 577 PL---EPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
+ EP+ + S+L C + +DLG +I + L N S L ++Y+ GK
Sbjct: 465 QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKL 524
Query: 633 EDAANIRKSMK 643
+ A I + +K
Sbjct: 525 DHALKIFRRLK 535
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/514 (24%), Positives = 224/514 (43%), Gaps = 105/514 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P +F Y +L++ R +G+ +H +++K G +V++ + L++ YAK + +A
Sbjct: 469 IEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHAL 528
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
K+F + K + SW +++ YA+ +F
Sbjct: 529 KIFRRLKEKDVVSWTAMIAGYAQH-------------------------------EKFAE 557
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ +F EM + S +++C + L+ G+++H+ +G S ++V N+L++
Sbjct: 558 ALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVS 617
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+YA+ G A FD + K+ SWN ++S
Sbjct: 618 LYARCGKVRDAYFAFDKIFSKDNISWNSLIS----------------------------- 648
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
G++Q+G+ EAL +F+ M K + + + FT +SA AN+ +KLGKQIHA II+T
Sbjct: 649 --GFAQSGHCEEALSLFSQMSK-AGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTG 705
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
D+ V N LI+ YAK G+I A R
Sbjct: 706 HDSETEVSNVLITLYAKC---------------------------------GNIDDAERQ 732
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +++ ++W AML GY Q+G A+ LF M + G PN+ T +LS S + +
Sbjct: 733 FFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLV 792
Query: 429 DHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
D G K + G ++ + ++G ++ ARR + + + + +++
Sbjct: 793 DEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLS 852
Query: 488 ALAQH---GLGEEAIQLFERMLELGIKPDHITYV 518
A H +GE A +LEL K D TYV
Sbjct: 853 ACIVHKNIDIGEFAA---SHLLELEPK-DSATYV 882
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 28/265 (10%)
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TA+ Y + + + M G + N+ T +L S G ++H L+
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + + + L+ +Y G+++ A VF+ + R + W ++ + +
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSC-WNKVLHRFVAGKMAGRVLG 155
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS----- 555
LF RML+ +KPD TY GVL C GG G ++ ++ +H T + S
Sbjct: 156 LFRRMLQEKVKPDERTYAGVLRGC--GG----GDVPFHCVEKIHARTITHGYENSLFVCN 209
Query: 556 -MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK---LLLI 611
++DL + G L A + + + D V+W ++LS L + E+ LL
Sbjct: 210 PLIDLYFKNGFLNSAKKVFDGLQ-KRDSVSWVAMLSG--------LSQSGCEEEAVLLFC 260
Query: 612 EPDNSGAYSA---LCNLYSSCGKWE 633
+ SG Y ++ S+C K E
Sbjct: 261 QMHTSGVYPTPYIFSSVLSACTKVE 285
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/753 (36%), Positives = 433/753 (57%), Gaps = 68/753 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTE--SISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
VH + IK GL+ + L+N +M F E YA+++FDE+P L
Sbjct: 58 VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNL------------- 104
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
W T+I Y+ + + + +++EM++ V P ++T +
Sbjct: 105 ------------------FIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
T L G+++H V+K GL V V +L+ MY
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMY---------------------- 184
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+ G+LD AR FD + DV+TWN +I+ Y++ G E+ +F +++D
Sbjct: 185 ---------LLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFL-VMEDK 234
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+ P TL LSAC+ L+ L+ GK++H+Y+ + ++ + NA+I YA G ++ A
Sbjct: 235 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 294
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
I ++ ++I++TT++ G+ +G+I AR FD + ++D V+WTAM+ GY ++
Sbjct: 295 LGIFR--SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNR 352
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
K+A+ELFR+M KP+ +T+ ++L+ + L +L+ G+ I R+ + L V NA
Sbjct: 353 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 412
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MY K G+++ A +F + R + +WT+MIV LA +G GE+A+ +F ML+ I P
Sbjct: 413 LIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILP 471
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D ITY+GVL+ACTH GLV++G++Y+ M + H I+P +H+ +VDLL RAG L+EAY
Sbjct: 472 DEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEV 531
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
IENMP++ + + WG+LL+ CRV++ D+ ++ +++L +EPDN Y LCN+Y++C +W
Sbjct: 532 IENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRW 591
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
D +R+ M G+KK G S +++ +VH F D HPQ I K+ K+ ++K
Sbjct: 592 NDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLA 651
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+ PD + V D+ E+ KE + HSEKLAIAFGLI++P T+RI KNLR+C DCH+
Sbjct: 652 GYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMA 711
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + K+ +RE++VRD TRFHHFK GLCSC+DYW
Sbjct: 712 KLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 169/341 (49%), Gaps = 40/341 (11%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + K ++ GK VH+ + C + ++ L+N++++ YA + A +F M +
Sbjct: 246 VLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 305
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ SW TI+S + G +D+A F+ MP +D VSWT +I Y RFK A+ +F M
Sbjct: 306 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 365
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V P +FT+ SVL +C LG L G+ + +++ + + + V N+L++MY K GD
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD--- 422
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+D A + F +M +RD TW +MI G + NG+
Sbjct: 423 ----------------------------VDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 454
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-TEFDATGPV-- 315
+AL MF+NMLK +S+ PD+ T LSAC + + G++ Y +R T P
Sbjct: 455 EKALDMFSNMLK-ASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQHGIEPNIA 510
Query: 316 -GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
L+ A+ G ++ A +++E I N I + LL G
Sbjct: 511 HYGCLVDLLARAGRLKEAYEVIENMPIK-ANSIVWGALLAG 550
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 13/233 (5%)
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM--YSKAGNINAARRVFNLIHW 475
++S+ + S+D +Q+H A++ G ++ + N ++T + G+ ARR+F+ I
Sbjct: 42 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP- 100
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
W +MI ++ + + L+ ML G+KPD T+ + T +E G++
Sbjct: 101 EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 160
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ + H ++ ++V + G L A + P + DV+ W ++SA
Sbjct: 161 LHGHVLK-HGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCP-KADVITWNMIISAYN-- 216
Query: 596 KNLDLGKI-AAEKLLLIEPDNS--GAYSALCNLYSSCGKWEDAANIRKSMKYV 645
+GK + +L L+ D L + S+C K +D +K YV
Sbjct: 217 ---KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/706 (37%), Positives = 416/706 (58%), Gaps = 52/706 (7%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y+ L + +FN + +++W ++I Y G ++ F+ M+ + P
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG-------DEMMAKA 201
SVL SC L DL+ G+ +H ++++ GL + N+L+NMY+K+ + A
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169
Query: 202 VFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
VFD M R ++V + +V+ D R F+ M E+D+V+WN++IAG ++NG
Sbjct: 170 VFDEMTERTRSVRTVSVLSE--------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE 221
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
E L M M ++LKPD FTL+S L A + GK+IH IR DA
Sbjct: 222 ETLRMIREM-GGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDA-------- 272
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
++ ++L+D Y K + + R+F L +RD ++
Sbjct: 273 -------------------------DIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W +++ G QNGL + + FR M+ KP +Y+ S+++ + L +L GKQ+H
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 367
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
R+G ++ ++++L+ MY+K GNI A+++F+ + R + VSWT+MI+ A HG +AI
Sbjct: 368 RNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALHGQAPDAI 426
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
+LFE+M GIKP+H+ ++ VLTAC+HGGLV++ +Y+N M I P H+A++ DL
Sbjct: 427 ELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDL 486
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGRAG L+EAY+FI M + P W +LLSACRVH N+D+ + A ++L ++P+N+GAY
Sbjct: 487 LGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAY 546
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+YS+ +W++AA R SM+ +G++KT SW++++NKV+ F D HP + I
Sbjct: 547 ILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIR 606
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
M + + +++ G+VPDT+ V HDVEE+ K+ ++ HSE+LAI FG+I+TP T+R+
Sbjct: 607 EAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVT 666
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH+A KFI K+V REIVVRD +RFHHFK G CSC DYW
Sbjct: 667 KNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 221/487 (45%), Gaps = 81/487 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY-------AKKVFDEMPVKTLCSWN 83
+G+ +H II+ GL ++ N+LMN Y+K + A +VFDEM +T
Sbjct: 124 LGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRT 183
Query: 84 -TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++LS D ++F +MP +D VSW TII G ++ +RM EM +
Sbjct: 184 VSVLSE-------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLK 236
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT++SVL D+S GK++H ++ GL + V +SL++MYAK + V
Sbjct: 237 PDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV 296
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F + ++ SWN S+IAG QNG E L
Sbjct: 297 FTLLTERDGISWN-------------------------------SIIAGCVQNGLFDEGL 325
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F ML + +KP ++ +S + ACA+L L LGKQ+H YI R FD + ++L+
Sbjct: 326 RFFRQMLM-AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 384
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +I A++IFD +R RD+V+WTA
Sbjct: 385 YAKCG---------------------------------NIRTAKQIFDRMRLRDMVSWTA 411
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS- 441
M++G +G DA+ELF M EG KPN+ A+L+ S +D + S R
Sbjct: 412 MIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDF 471
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G A + A+ + +AG + A +H W +++ A H + A ++
Sbjct: 472 GIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKV 531
Query: 502 FERMLEL 508
R+LE+
Sbjct: 532 ANRILEV 538
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/755 (37%), Positives = 411/755 (54%), Gaps = 98/755 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H ++K G L +F L N YAK ++ A+KVFD
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR----------------- 195
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
MP RD VSW TI+ Y++ G + A+ M M ++ + P+ T+ S
Sbjct: 196 --------------MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + +AL +S GK++H + +++G VN++ +L++MYAK G
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS--------------- 286
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
L+ AR FD M+ER+VV+WNSMI Y QN EA+ +F ML
Sbjct: 287 ----------------LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML- 329
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D +KP ++ L ACA+L L+ G+ IH + D V N+LIS Y K
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK--- 386
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
++ A +F L+ R +V+W AM++G+ QN
Sbjct: 387 ------------------------------EVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G DA+ F M KP+ +T ++++ + L+ H K IH +RS ++ V+
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
AL+ MY+K G I AR +F+++ R T +W +MI HG G+ A++LFE M + I
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVT-TWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T++ V++AC+H GLVE G + + MMK + I+ + H+ +MVDLLGRAG L EA+
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+FI MP++P V +G++L AC++HKN++ + AAE+L + PD+ G + L N+Y +
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
WE +R SM G++KT G S V+I+N+VH F HP IY + K+ IK
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+VPDT VL VE DVKEQ+L HSEKLAI+FGL++T TT+ + KNLRVC DCH+
Sbjct: 716 EAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 774
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K+I + REIVVRD RFHHFK G CSC DYW
Sbjct: 775 ATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 166/623 (26%), Positives = 270/623 (43%), Gaps = 128/623 (20%)
Query: 2 ETPNPPS----LIS-----PLEFYAH---LLQSNLKSRNPFVGKLVHARIIKCGLHLSVF 49
+ PNPPS +S P Y H LL S + + + K GL+ F
Sbjct: 13 QIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKEL--RQILPLVFKNGLYQEHF 70
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
+ L++ + + S+ A +VF+ + K ++T+L +AK LD
Sbjct: 71 FQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD------------- 117
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
A++ FV M D V P + T +L C +L GK++H
Sbjct: 118 ------------------KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
+VK+G S + L NMYAK A+ VFD M +++ SWN +V
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV----------- 208
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AGYSQNG AL M +M ++ +LKP T+ S L A +
Sbjct: 209 --------------------AGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVLPAVS 247
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L + +GK+IH Y +R+ FD+ + AL+ YAK G +E A+++ + G+ NV+++
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSW 305
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
+++D Y+ QN K+A+ +F+ M+ EG K
Sbjct: 306 NSMIDAYV-------------------------------QNENPKEAMLIFQKMLDEGVK 334
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P + ++ L + L L+ G+ IH ++ G ++SV N+LI+MY K ++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F + R VSW +MI+ AQ+G +A+ F +M +KPD TYV V+TA +
Sbjct: 395 FGKLQSRT-LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 530 VEQGQRYYNMM------KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
+ + ++ KNV ++VD+ + G + A I +M E V
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVT-------TALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 584 AWGSLLSACRVHKNLDLGKIAAE 606
W +++ H GK A E
Sbjct: 506 TWNAMIDGYGTH---GFGKAALE 525
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T L+ + + G + A R+F+ + + V + ML G+ + A++ F M + +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P Y + +L V A L GK+IH ++SG + L L MY+K +N AR+V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ + R + VSW +++ +Q+G+ A+++ + M E +KP IT V VL A + L
Sbjct: 193 FDRMPER-DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 530 VEQGQRY--YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
+ G+ Y M + + ++VD+ + G L+ A + M LE +VV+W S
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNIST---ALVDMYAKCGSLETARQLFDGM-LERNVVSWNS 307
Query: 588 LLSACRVHKNLDLGKIAAEKLL 609
++ A ++N + +K+L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKML 329
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 288/824 (34%), Positives = 440/824 (53%), Gaps = 136/824 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ VH + +K G V + SL++ Y KTE + +FDEM +K +
Sbjct: 122 VGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV----------- 170
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VSWT+++ Y G I + +M + V P FT +
Sbjct: 171 --------------------VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFAT 210
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + + G +VH+ +VK G V N+L+ MY K EM+ A
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLK--SEMVGDA--------- 259
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
A FD M+ RD VTWN MI GY+ G+ E MF M +
Sbjct: 260 --------------------EAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM-R 298
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY------- 323
+ +K + + L C+ +L KQ+H +++ ++ + AL+ Y
Sbjct: 299 LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358
Query: 324 -------------------AKVGG--------------VEIAQKIVEQSGISYLNVIA-- 348
A +GG +++++ V + +Y V+A
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGK 418
Query: 349 -----------------------FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
T LLD Y+K G++ + R+F S+ +D+VAW+AML
Sbjct: 419 PSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLT 478
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRSGEA 444
G Q ++ A+E+F +V+EG KPN YT S+++ + SSS A+++HGKQIHA+A++SG++
Sbjct: 479 GLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKS 538
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQE---TVSWTSMIVALAQHGLGEEAIQL 501
++L VS+AL+TMYSK GNI +A +VF RQE VSW SMI QHG ++A+++
Sbjct: 539 NALCVSSALLTMYSKKGNIESAEKVFT----RQEERDIVSWNSMITGYGQHGDAKKALEV 594
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M G+ D +T++GVLTACTH GLVE+G++Y+N+M + I H++ MVDL
Sbjct: 595 FQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYS 654
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG+ +A + I MP W +LL+ACRVH+NL+LGK+AAEKL+ ++P+++ Y
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+++ G WE+ A++RK M VKK G SW++I+N++ F D HP D +Y K
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAK 774
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ ++K+MG+ PDT V HDVEE+ KE +L HSE+LAIA+GLI+ P ++I KN
Sbjct: 775 LEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKN 834
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C DCH+ I+ I + +R ++VRD+ RFHHFK G+CSC YW
Sbjct: 835 LRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/552 (24%), Positives = 240/552 (43%), Gaps = 102/552 (18%)
Query: 40 IKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLAC 99
IK LH FL + + F + YA ++FDE P+K + +N +L +++
Sbjct: 30 IKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRN------- 82
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
N D + A+ +F ++ + T++ L C L
Sbjct: 83 -------NHD-----------------REALHLFKDLHSSGLGVDGLTLSCALKVCGVLF 118
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
D G++VH +K+G V+V SL++MY K D + +FD M +KNV
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV-------- 170
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
V+W S+++GY++NG + E + + N ++ + P+ F
Sbjct: 171 -----------------------VSWTSLLSGYARNGLNDEVIHLI-NQMQMEGVNPNGF 206
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T A+ L A A+ ++ G Q+HA I++ F+ T V NALI
Sbjct: 207 TFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM----------------- 249
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
Y+K +G A +FDS+ RD V W M+ GY G + ++
Sbjct: 250 ----------------YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M G K + L + S L+ KQ+H +++G + + AL+ YSK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+++ A ++F++ V+WT+MI Q+ ++A+ LF +M G++P+H TY
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
VL L Q + ++K + + PS +++D + G + E+ ++P +
Sbjct: 414 VLAGKPSSLL---SQLHAQIIKAYY--EKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 580 PDVVAWGSLLSA 591
D+VAW ++L+
Sbjct: 469 -DIVAWSAMLTG 479
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/709 (35%), Positives = 430/709 (60%), Gaps = 42/709 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQV 141
+ ++ Y+K G ++ A +VF + R+ VS+ ++ Y + G+ + A+ ++ +M +D +
Sbjct: 416 SALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGI 475
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P QFT T++L C + + G+++H+ +++ ++ + V L++MY++ G
Sbjct: 476 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECG------- 528
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
RL+ A+ F++M ER+ +WNSMI GY QNG EA
Sbjct: 529 ------------------------RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 564
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + +KPD F+L+S LS+C +L + G+++H +I+R + G + L+
Sbjct: 565 LRLFKQM-QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVD 623
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G ++ A K+ +Q+ +VI ++ ++ G A+ +FD + R+ W
Sbjct: 624 MYAKCGSMDYAWKVYDQTIKK--DVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWN 681
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++L GY GL K++ F M+ + + T+ ++++ SSL +L+HG Q+H+ ++
Sbjct: 682 SILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKK 741
Query: 442 GEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + S+ + AL+ MYSK G I AR VF+ ++ + VSW +MI ++HG +EA+
Sbjct: 742 GFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKN-IVSWNAMISGYSKHGCSKEALI 800
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
L+E M + G+ P+ +T++ +L+AC+H GLVE+G R + M+ + I+ H+ MVDLL
Sbjct: 801 LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLL 860
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L++A F+E MP+EP+V WG+LL ACRVHK++D+G++AA++L ++P N G Y
Sbjct: 861 GRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYV 920
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
+ N+Y++ G+W++ +IR+ MK GVKK G SW++I +++ +F HP+ + IYN
Sbjct: 921 IMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYN 980
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM----LRHHSEKLAIAFGLISTPENTTL 736
+ + + K +G++PDT+ +L +V +D+KE+ L HSE+LA++ GLIS P+ +T+
Sbjct: 981 NLRHLTLQSKGLGYIPDTSFILQNV-KDIKEEEEEEYLLQHSERLALSLGLISLPKKSTI 1039
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+ KNLR+C DCH+A KFI K+ R I+ RD RFHHF+ G CSC DYW
Sbjct: 1040 RVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 174/665 (26%), Positives = 287/665 (43%), Gaps = 130/665 (19%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
P S ++PL Y+ L+Q + S + GK +H ++I G + +L ++ YA++ +
Sbjct: 65 PASDVNPLP-YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
LC YA++ +F MP R+ +W T+I+ Y +
Sbjct: 124 ------------DLC--------YARK--------LFEEMPERNLTAWNTMILAYARVDD 155
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
+ +R++ M +FT SV+ +C A+ D+ +++ S VVK GL+ + V +
Sbjct: 156 YMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGA 215
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++ YA+ G W +D A D++ VVTW
Sbjct: 216 LVDGYARFG-------------------W------------MDDAVTSLDEIEGTSVVTW 244
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N++IAGY + EA G+F MLK + PD FT AS L C L GKQ+H+ +I
Sbjct: 245 NAVIAGYVKILSWEEAWGIFDRMLK-IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
F VGNALI YAK E K
Sbjct: 304 ACGFKGDTFVGNALIDMYAKCDDEESCLK------------------------------- 332
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
+FD + +R+ V W +++ Q G DA+ LF M G K N + L ++L S+ L
Sbjct: 333 --VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGL 390
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
A + G+++H +R+ S + + +AL+ MYSK G + A +VF + R E VS+ ++
Sbjct: 391 ADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNE-VSYNAL 449
Query: 486 IVALAQHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYY------N 538
+ Q G EEA++L+ M E GI+PD T+ +LT C + QG++ + N
Sbjct: 450 LAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 509
Query: 539 MMKNV------------------------HKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+ KN+ + + SM++ + G QEA +
Sbjct: 510 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 569
Query: 575 NMPL---EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS-ALCNLYSSCG 630
M L +PD + S+LS+C + G+ ++ + G L ++Y+ CG
Sbjct: 570 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCG 629
Query: 631 KWEDA 635
+ A
Sbjct: 630 SMDYA 634
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 159/658 (24%), Positives = 289/658 (43%), Gaps = 143/658 (21%)
Query: 24 LKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWN 83
L+SR+ GK VH+++I CG F+ N+L++ YAK + KVFDE
Sbjct: 289 LRSRDG--GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDE---------- 336
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
M R+ V+W +II + G F +A+ +F+ M +
Sbjct: 337 ---------------------MGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS 375
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+F + S+L + L D+ G+++H +V+ L+ + + ++L++MY+K G A VF
Sbjct: 376 NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVF 435
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+ +N S+N +++AGY Q G EAL
Sbjct: 436 RSLLERNEVSYN-------------------------------ALLAGYVQEGKAEEALE 464
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
++ +M + ++PD+FT + L+ CAN G+QIHA++IR
Sbjct: 465 LYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR----------------- 507
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
I + I+ + T L+ Y + G + A+ IF+ + +R+ +W +M
Sbjct: 508 -----ANITKNIIVE-----------TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSM 551
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ GY+QNG ++A+ LF+ M G KP+ ++LS+MLS SL+ G+++H +R+
Sbjct: 552 IEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTM 611
Query: 444 ASSLSVSNALITMYSKAGNI-------------------------------NAARRVFNL 472
+ L+ MY+K G++ N A+ +F+
Sbjct: 612 EEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQ 671
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ R T W S++ A GL +E+ F MLE I+ D +T V ++ C+ +E
Sbjct: 672 MEQRN-TALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEH 730
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G + ++++ + + ++VD+ + G + +A +NM ++V+W +++S
Sbjct: 731 GDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN-GKNIVSWNAMISGY 789
Query: 593 RVHKNLDLGKIAAEKLLLIEP-------DNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
H + E L+L E N + A+ + S G E+ I SM+
Sbjct: 790 SKH------GCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQ 841
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 251/509 (49%), Gaps = 71/509 (13%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ YA+ G +D A + + V+W +I Y +I ++ A +F M++ V P
Sbjct: 216 LVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPD 275
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT S L C AL GK+VHS ++ G G V N+L++MYAK DE VFD
Sbjct: 276 NFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFD 335
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +N +WN ++S A AQF G+ +AL +
Sbjct: 336 EMGERNQVTWNSIIS----------AEAQF---------------------GHFNDALVL 364
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M ++S K ++F L S L A A L + G+++H +++R ++ +G+AL+ Y+
Sbjct: 365 FLRM-QESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYS 423
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G VE A + +F SL +R+ V++ A+L
Sbjct: 424 KCGMVEEAHQ---------------------------------VFRSLLERNEVSYNALL 450
Query: 385 VGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
GY Q G ++A+EL+ M E G +P+ +T + +L++ ++ + + G+QIHA +R+
Sbjct: 451 AGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI 510
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
++ V L+ MYS+ G +N A+ +FN + R SW SMI Q+G +EA++LF+
Sbjct: 511 TKNIIVETELVHMYSECGRLNYAKEIFNRMAERN-AYSWNSMIEGYQQNGETQEALRLFK 569
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGR 562
+M GIKPD + +L++C ++G+ +N +++N + + +VD+ +
Sbjct: 570 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ--VVLVDMYAK 627
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G + A+ + + ++ DV+ ++SA
Sbjct: 628 CGSMDYAWK-VYDQTIKKDVILNNVMVSA 655
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 248/502 (49%), Gaps = 74/502 (14%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P +F + LL RN G+ +HA +I+ + ++ ++ L++ Y++ ++YAK
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
++F+ M + SWN+++ Y + G +
Sbjct: 535 EIFNRMAERNAYSWNSMIEGYQQNGET-------------------------------QE 563
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL--SGCVNVTNSL 186
A+R+F +M + + P F+++S+L+SC +L D G+++H+F+V+ + G + V L
Sbjct: 564 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV--L 621
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK G A V+D K+V NV+VS ++SGR + A+ FDQM +R+ WN
Sbjct: 622 VDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWN 681
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
S++AGY+ G E+ F ML +S ++ D T+ + ++ C++L L+ G Q+H+ II+
Sbjct: 682 SILAGYANKGLKKESFNHFLEML-ESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIK 740
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F ++C +V+ T L+D Y K G I AR
Sbjct: 741 KGF----------VNC----------------------SVVLETALVDMYSKCGAITKAR 768
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+FD++ +++V+W AM+ GY ++G +K+A+ L+ M ++G PN T A+LS S
Sbjct: 769 TVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTG 828
Query: 427 SLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
++ G +I S + + ++ + +AG + A+ + E +W ++
Sbjct: 829 LVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGAL 888
Query: 486 IVALAQH---GLGEEAIQ-LFE 503
+ A H +G A Q LFE
Sbjct: 889 LGACRVHKDMDMGRLAAQRLFE 910
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 227/523 (43%), Gaps = 89/523 (17%)
Query: 217 VVSLHIHSGRLD---LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
++ L+ SG LD AR F++M ER++ WN+MI Y++ E L ++ M + S
Sbjct: 112 ILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRM-RGSG 170
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
DKFT S + AC +E + +Q+ + +++ A ++C VGG
Sbjct: 171 NFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVK-----------AGLNCNLFVGGA---- 215
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
L+DGY + G + A D + VV W A++ GY +
Sbjct: 216 ------------------LVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSW 257
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
++A +F M++ G P+N+T ++ L V +L S D GKQ+H+ + G V NAL
Sbjct: 258 EEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNAL 317
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K + + +VF+ + R + V+W S+I A AQ G +A+ LF RM E G K +
Sbjct: 318 IDMYAKCDDEESCLKVFDEMGERNQ-VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSN 376
Query: 514 HITYVGVLTACT-----------HGGLVEQ--------GQRYYNMMKNVHKIKPTPSHFA 554
+L A HG LV G +M ++ F
Sbjct: 377 RFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFR 436
Query: 555 SMVD---------LLG--RAGLLQEAYNFIENMP----LEPDVVAWGSLLSACRVHKNLD 599
S+++ L G + G +EA +M ++PD + +LL+ C +N +
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDN 496
Query: 600 LGK-IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
G+ I A + N + L ++YS CG+ A I M + +SW +
Sbjct: 497 QGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRM-----AERNAYSWNSM 551
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
+E + Q++ + +++ +++ G PD S+
Sbjct: 552 --------IEGY---QQNGETQEALRLFKQMQLNGIKPDCFSL 583
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/693 (39%), Positives = 406/693 (58%), Gaps = 33/693 (4%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A VF + + + W T++ + +A+ M+V MV LP ++ +L S
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C G+++H+ V+K G V SL++MYA+ G A+ VFD ++V S
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+++ + G AR FD++ ERDVV+WN+MI GY +NG EAL +F M++ +++
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR-TNV 192
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PD+ TL S +SACA ++LG+Q+H+++ G + K
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDD----------------DDDHGFSSSLK 236
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
IV L+D Y K GD+ A +F+ L +DVV+W ++ GY L K
Sbjct: 237 IV-------------NALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYK 283
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS--GEASSLSVSNA 452
+A+ LF+ M+R G PN+ TL ++L + L ++D G+ IH + G + S+ +
Sbjct: 284 EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTS 343
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MY+K G+I AA +VFN + +R + SW +MI A HG A LF RM ++P
Sbjct: 344 LIDMYAKCGDIEAAHQVFNSMLYRSLS-SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEP 402
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D IT+VG+L+AC+H GL++ G++ + M + + P H+ M+DLLG +GL +EA
Sbjct: 403 DDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEM 462
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I MP+EPD V W SLL AC+ H NL+L + A+KL+ IEP+NSG+Y L N+Y++ G+W
Sbjct: 463 IHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRW 522
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
ED A +R + G+KK G S +++ + VH F + D LHP+R IY+ + ++ +++E
Sbjct: 523 EDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEA 582
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
GF PDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +CH A
Sbjct: 583 GFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 642
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+ REIV RD TRFHHF+ G+CSC DYW
Sbjct: 643 KLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 237/506 (46%), Gaps = 74/506 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +HA+++K G L ++ SL++ YA+ + A+KVFD
Sbjct: 67 FPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASS 126
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S +++ YA +G A +VF+ + RD VSW +I Y E GR++ A+ +F E
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT----GLSGCVNVTNSLLNMYA 191
M++ V P + T+ SV+++C G + G++VHS+V G S + + N+L+++Y+
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K GD A +F+G+ K+V SW N++I G
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSW-------------------------------NTLIGG 275
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y+ EAL +F ML+ P+ TL S L ACA+L + +G+ IH YI +
Sbjct: 276 YTHTNLYKEALLLFQEMLRSGEC-PNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGV 334
Query: 312 TGPVG--NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
T +LI YAK GDI A ++F
Sbjct: 335 TNETSLRTSLIDMYAKC---------------------------------GDIEAAHQVF 361
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+S+ R + +W AM+ G+ +G A +LF M +P++ T +LS S LD
Sbjct: 362 NSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLD 421
Query: 430 HGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+QI S + + L +I + +G A + + + + V W S++ A
Sbjct: 422 LGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKA 481
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDH 514
+HG E A +++++ I+P++
Sbjct: 482 CKKHGNLELAESFAQKLIK--IEPEN 505
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 222/425 (52%), Gaps = 45/425 (10%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
VVS H L A + F+ + E +++ WN+M+ G++ + AL M+ M+ L P
Sbjct: 6 VVSPHFDG--LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-P 62
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ ++ L +CA + + G+QIHA +++ V +LIS YA+ GG+E A+K+
Sbjct: 63 NSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVF 122
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+ S S+ +V++ T L+ GY GD AR++FD + +RDVV+W AM+ GY +NG ++A
Sbjct: 123 DAS--SHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEA 180
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA----SALRSGEASSLSVSNA 452
+ELF+ M+R +P+ TL +++S + S++ G+Q+H+ G +SSL + NA
Sbjct: 181 LELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNA 240
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI +YSK G++ A +F + + + VSW ++I L +EA+ LF+ ML G P
Sbjct: 241 LIDLYSKCGDVETAFGLFEGLSCK-DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP 299
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
+ +T + VL AC H G ++ G+ + + K + + S S++D+ + G ++ A+
Sbjct: 300 NDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQ 359
Query: 572 FIENM----------------------------------PLEPDVVAWGSLLSACRVHKN 597
+M +EPD + + LLSAC
Sbjct: 360 VFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGL 419
Query: 598 LDLGK 602
LDLG+
Sbjct: 420 LDLGR 424
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 288/824 (34%), Positives = 440/824 (53%), Gaps = 136/824 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ VH + +K G V + SL++ Y KTE + +FDEM +K +
Sbjct: 122 VGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV----------- 170
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VSWT+++ Y G I + +M + V P FT +
Sbjct: 171 --------------------VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFAT 210
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + + G +VH+ +VK G V N+L+ MY K EM+ A
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLK--SEMVGDA--------- 259
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
A FD M+ RD VTWN MI GY+ G+ E MF M +
Sbjct: 260 --------------------EAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM-R 298
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY------- 323
+ +K + + L C+ +L KQ+H +++ ++ + AL+ Y
Sbjct: 299 LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358
Query: 324 -------------------AKVGG--------------VEIAQKIVEQSGISYLNVIA-- 348
A +GG +++++ V + +Y V+A
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGK 418
Query: 349 -----------------------FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
T LLD Y+K G++ + R+F S+ +D+VAW+AML
Sbjct: 419 PSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLT 478
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRSGEA 444
G Q ++ A+E+F +V+EG KPN YT S+++ + SSS A+++HGKQIHA+A++SG++
Sbjct: 479 GLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKS 538
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQE---TVSWTSMIVALAQHGLGEEAIQL 501
++L VS+AL+TMYSK GNI +A +VF RQE VSW SMI QHG ++A+++
Sbjct: 539 NALCVSSALLTMYSKKGNIESAEKVFT----RQEERDIVSWNSMITGYGQHGDAKKALEV 594
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M G+ D +T++GVLTACTH GLVE+G++Y+N+M + I H++ MVDL
Sbjct: 595 FQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYS 654
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG+ +A + I MP W +LL+ACRVH+NL+LGK+AAEKL+ ++P+++ Y
Sbjct: 655 RAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVL 714
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+++ G WE+ A++RK M VKK G SW++I+N++ F D HP D +Y K
Sbjct: 715 LSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAK 774
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ ++K+MG+ PDT V HDVEE+ KE +L HSE+LAIA+GLI+ P ++I KN
Sbjct: 775 LEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKN 834
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C DCH+ I+ I + +R ++VRD+ RFHHFK G+CSC YW
Sbjct: 835 LRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 240/552 (43%), Gaps = 102/552 (18%)
Query: 40 IKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLAC 99
IK LH FL + + F + YA ++FDE P+K + +N +L +++
Sbjct: 30 IKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRN------- 82
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
N D + A+ +F ++ + T++ L C L
Sbjct: 83 -------NHD-----------------REALHLFKDLHSSGLGVDGLTLSCALKVCGVLF 118
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
D G++VH +K+G V+V SL++MY K D + +FD M +KNV
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV-------- 170
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
V+W S+++GY++NG + E + + N ++ + P+ F
Sbjct: 171 -----------------------VSWTSLLSGYARNGLNDEVIHLI-NQMQMEGVNPNGF 206
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T A+ L A A+ ++ G Q+HA I++ F+ T V NALI
Sbjct: 207 TFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM----------------- 249
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
Y+K +G A +FDS+ RD V W M+ GY G + ++
Sbjct: 250 ----------------YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M G K + L + S L+ KQ+H +++G + + AL+ YSK
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+++ A ++F++ V+WT+MI Q+ E+A+ LF +M G++P+H TY
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
VL L Q + ++K + + PS +++D + G + E+ ++P +
Sbjct: 414 VLAGKPSSLL---SQLHAQIIKAYY--EKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 580 PDVVAWGSLLSA 591
D+VAW ++L+
Sbjct: 469 -DIVAWSAMLTG 479
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/715 (38%), Positives = 421/715 (58%), Gaps = 43/715 (6%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL + +KS++ F +LVHARIIK +F++N L++ Y K + A+KVFD M
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ SWN +L A K G LD A +F MP RD SW ++ + + RF+ A+R V+
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + +++ S L++C L DLS G ++H + K+ S V + ++L++MY+K
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKC-- 199
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
VV S A+ FD M R++V+WNS+I Y QN
Sbjct: 200 -------------------RVVAS----------AQRAFDDMDVRNIVSWNSLITCYEQN 230
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGP 314
G +AL +F M+ + ++PD+ TLAS SACA+L ++ G QIHA +++ + +
Sbjct: 231 GPAGKALEVFVRMM-NCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLV 289
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+GNAL+ YAK V A+ + ++ + +V++ T+++ GY K + AR +F ++ +
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLR--DVVSETSMVSGYAKASSVKAARLMFSNMME 347
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
R+VV+W A++ GY QNG N++AV LF + RE P +YT +L+ ++LA L G+Q
Sbjct: 348 RNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407
Query: 435 HASALR------SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
H L+ SGE S + V N+LI MY K G + R VF + R + VSW +MIV
Sbjct: 408 HTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLER-DNVSWNAMIVG 466
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQ+G G EA+++F ML G +PDH+T +GVL+AC+H GLVE+G+ Y+ M H + P
Sbjct: 467 YAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVP 526
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ MVDLLGRAG L EA N I+ MP+EPD V WGSLL+AC+VH N+ LGK AE+L
Sbjct: 527 VKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERL 586
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L I+P NSG Y L N+Y+ G+W+D +RK M+ +GV K G SW+ IQ+ +HVF V+
Sbjct: 587 LEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVK 646
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAI 723
D HP + IY + + +++K +G+VP+ A EE+ +++ H + A+
Sbjct: 647 DKRHPHKKDIYLILKILTEQMKRVGYVPE-ADDDEPYEEESDSELILHSEMETAV 700
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 174/362 (48%), Gaps = 7/362 (1%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D A L C + + + +HA II+T+F + + N L+ Y K G +E A+K+
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+ + N ++ +L K G + A +F + +RD +W AM+ G+ Q ++A
Sbjct: 78 DH--MQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEA 135
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ M E N Y+ + LS + L L G QIH +S + + + +AL+ M
Sbjct: 136 LRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDM 195
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YSK + +A+R F+ + R VSW S+I Q+G +A+++F RM+ GI+PD IT
Sbjct: 196 YSKCRVVASAQRAFDDMDVRN-IVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEIT 254
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
V +AC + +G + + + K + ++VD+ + + EA + M
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
PL DVV+ S++S ++ ++ ++ N +++AL Y+ G+ E+A
Sbjct: 315 PLR-DVVSETSMVSGYAKASSVKAARLMFSNMM---ERNVVSWNALIAGYTQNGENEEAV 370
Query: 637 NI 638
+
Sbjct: 371 RL 372
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 47/236 (19%)
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
L R +V + ++ + +L S+ + +HA +++ +S + + N L+ +Y
Sbjct: 6 LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYG 65
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K G + AR+VF+ + R T SW +++ AL + G +EA+ LF+ M P
Sbjct: 66 KCGFLEDARKVFDHMQQRN-TFSWNAVLGALTKFGALDEALNLFKCM------P------ 112
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
E+ Q +N +MV + +EA F+ +M
Sbjct: 113 ------------ERDQCSWN----------------AMVSGFAQRDRFEEALRFVVDMHS 144
Query: 579 EPDVV---AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY--SALCNLYSSC 629
E V+ ++GS LSAC +L +G + L+ + Y SAL ++YS C
Sbjct: 145 EDFVLNEYSFGSALSACAGLMDLSIG-VQIHGLIAKSRYSLDVYMGSALVDMYSKC 199
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/734 (38%), Positives = 424/734 (57%), Gaps = 56/734 (7%)
Query: 55 MNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
++++A+ I A+ +FD++ KT+ SWN I++ Y R A ++F+ MP R+++SW
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
++ G KN + V D+ +P + V+
Sbjct: 83 GLVS-----GYVKNGMISEARKVFDK-MPERNVVS------------------------- 111
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
S++ Y + G A+ +F M KNV SW V++ I GR+D AR F
Sbjct: 112 --------WTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF 163
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA--STLSACANLE 292
D + +DVV +MI G G EA +F M P + +A S +S A
Sbjct: 164 DMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEM-------PQRNVVAWTSMISGYAMNN 216
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
K+ + +++ + D A++ Y + G + A ++ + + V A +
Sbjct: 217 KVDVARKLFEVMP----DKNEVTWTAMLKGYTRSGRINEAAELFKAMPVK--PVAACNGM 270
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
+ G+ G++G AR +FD ++++D W+A++ YE+ G +A+ LF M REG +PN
Sbjct: 271 IMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNF 330
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
++ ++LSV SLASLDHG+Q+H+ +RS + VS+ LITMY K G++ +RVF+
Sbjct: 331 PSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDR 390
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
++ V W S+I AQHG GE+A+++F M G PD IT++GVL+AC + G V++
Sbjct: 391 FS-SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKE 449
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G + MK+ +++ H+A MVDLLGRAG L EA N IENMP+E D + WG+LLSAC
Sbjct: 450 GLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSAC 509
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQG 652
R HKNLDL +IAA+KLL +EP ++G Y L NLY+S +W+D A +RK+M+ V K+ G
Sbjct: 510 RTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPG 569
Query: 653 FSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKE 711
SW+++ NKVH+F G HP+ + I K+ K+ ++E G+ PD + V+HDV+E+ K
Sbjct: 570 CSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKV 629
Query: 712 QMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRF 771
LRHHSEK+A+A+GL+ P +R+MKNLRVC DCHSAIK I ++ REI++RDA RF
Sbjct: 630 HSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRF 689
Query: 772 HHFKKGLCSCRDYW 785
HHFK GLCSCRD+W
Sbjct: 690 HHFKDGLCSCRDFW 703
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 217/471 (46%), Gaps = 70/471 (14%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N L++ Y K IS A+KVFD+MP + + SW +++ Y ++G +D A +F MP ++ V
Sbjct: 82 NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVV 141
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV--TSVLASCTALGDLSAGKKVH- 168
SWT ++ E GR A R+F ++P + V T+++ + G LS +++
Sbjct: 142 SWTVMLGGLIEDGRVDEARRLF------DMIPVKDVVASTNMIGGLCSEGRLSEAREIFD 195
Query: 169 -----------SFVVKTGLSGCVNVTNSL---------------LNMYAKVGDEMMAKAV 202
S + ++ V+V L L Y + G A +
Sbjct: 196 EMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAEL 255
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M +K V++ N ++ +G + AR FDQM E+D TW+++I Y + G++ EAL
Sbjct: 256 FKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEAL 315
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F+ M ++ ++P+ ++ S LS C +L L G+Q+H+ ++R+ FD V + LI+
Sbjct: 316 ALFSLMQRE-GVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITM 374
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YIK GD+ +R+FD +D+V W +
Sbjct: 375 ---------------------------------YIKCGDLVTGKRVFDRFSSKDIVMWNS 401
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY Q+G + A+E+F M G P+ T +LS + G +I S
Sbjct: 402 IIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKY 461
Query: 443 EASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ + A ++ + +AG +N A + + + + W +++ A H
Sbjct: 462 QVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTH 512
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 226/497 (45%), Gaps = 49/497 (9%)
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
++ S +T ++ +A++G A+ +FD ++ K V+SWN +V+ + H+ R A+
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
FD+M ER+ ++WN +++GY +NG EA +F M + + + +
Sbjct: 69 LFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEA 128
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
+L + ++ G + + G V+ A+++ + I +V+A T +
Sbjct: 129 ELLFWRMPEKNVVSWTVMLGGLIED---------GRVDEARRLFDM--IPVKDVVASTNM 177
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
+ G G + AR IFD + R+VVAWT+M+ GY N A +LF M P N
Sbjct: 178 IGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM----PDKNE 233
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
T +AML + ++ ++ ++ ++ N +I + G + AR VF+
Sbjct: 234 VTWTAMLKGYTRSGRINEAAEL----FKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQ 289
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ ++ +W+++I + G EA+ LF M G++P+ + + +L+ C ++
Sbjct: 290 MK-EKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDH 348
Query: 533 GQRYYNMMKNVHKIKPTPSHF-------ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
G++ ++ + SHF + ++ + + G L + D+V W
Sbjct: 349 GRQVHSQL--------VRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS-SKDIVMW 399
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS---ALCNLYSSC---GKWEDAANIR 639
S+++ H G+ A E + E +SGA + S+C GK ++ I
Sbjct: 400 NSIIAGYAQH---GFGEKALE--VFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIF 454
Query: 640 KSM--KYVGVKKTQGFS 654
+SM KY +KT+ ++
Sbjct: 455 ESMKSKYQVDQKTEHYA 471
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN PS+IS L L + G+ VH+++++ L +++ + L+ Y K
Sbjct: 328 PNFPSIISILSVCGSLASLDH-------GRQVHSQLVRSHFDLDIYVSSVLITMYIKCGD 380
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ K+VFD K + WN+I++ YA+ G + A EVF+ M + D +++ ++
Sbjct: 381 LVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSA 440
Query: 120 YNEIGRFKNAIRMFVEM 136
G+ K + +F M
Sbjct: 441 CGYTGKVKEGLEIFESM 457
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/726 (37%), Positives = 422/726 (58%), Gaps = 88/726 (12%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK GRLD A + L +RD V+W ++I ++++ RF A+ MV + V
Sbjct: 154 NALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVK 213
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P T SVL +C+ L L GK++H++ ++T + V ++L++MY G +
Sbjct: 214 PDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRL 273
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFD +++R + WN+MIAGY+Q+ +D +A
Sbjct: 274 VFD-------------------------------SVLDRKIGLWNAMIAGYAQSEHDEKA 302
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + L + T++S + A E + + IH Y+I+ + + NALI
Sbjct: 303 LMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALID 362
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+++G DI ++RIFDS+ DRD+V+W
Sbjct: 363 MYSRMG---------------------------------DIKTSKRIFDSMEDRDIVSWN 389
Query: 382 AMLVGYEQNGLNKDAVELFRSMVR-------EGP---------KPNNYTLSAMLSVSSSL 425
++ Y G + DA+ L M R +G KPN+ TL +L +SL
Sbjct: 390 TIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASL 449
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
++L GK+IHA A+R+ AS ++V +AL+ MY+K G +N ARRVF+ + R ++W +
Sbjct: 450 SALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRN-VITWNVI 508
Query: 486 IVALAQHGLGEEAIQLFERMLELG-----IKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
I+A HG G+E+++LFE M+ G +KP +T++ + +C+H G+V++G ++ M
Sbjct: 509 IMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKM 568
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV-AWGSLLSACRVHKNLD 599
KN H I+P P H+A +VDL+GRAG ++EAY + MP D V AW SLL ACR++ N++
Sbjct: 569 KNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIE 628
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
+G+IAAE LL ++PD + Y L N+YSS G W+ A N+R+ MK +GVKK G SW++
Sbjct: 629 IGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYG 688
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
++VH F D HPQ + +++ + + + +K+ G+VPDTA VLHD++E+ KE +L HSE
Sbjct: 689 DEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSE 748
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFG+++TP TT+R+ KNLRVCNDCH+A KFI K+ DREI++RDA RFHHFK G C
Sbjct: 749 KLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTC 808
Query: 780 SCRDYW 785
SC DYW
Sbjct: 809 SCGDYW 814
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 250/534 (46%), Gaps = 90/534 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G L A +VF+ + RD VSW +II ++ AI+ F M+ +
Sbjct: 51 NTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFE 110
Query: 143 PTQFTVTSVLASCTAL---GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
P+ FT+ S+ +C+ L L GK++H + G + N+L+ MYAK+
Sbjct: 111 PSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKL------ 163
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
GRLD A++ +RD+VTWNSMI+ +SQN
Sbjct: 164 -------------------------GRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFM 198
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EAL MF ++ +KPD T AS L AC++L+ L+ GK+IHAY +RT+
Sbjct: 199 EAL-MFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTD----------- 246
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
++E S + + L+D Y G + R +FDS+ DR +
Sbjct: 247 --------------DVIENSFVG-------SALVDMYCNCGQVESGRLVFDSVLDRKIGL 285
Query: 380 WTAMLVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W AM+ GY Q+ ++ A+ LF M G N T+S+++ + + IH
Sbjct: 286 WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYV 345
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
++ G ++ + NALI MYS+ G+I ++R+F+ + R + VSW ++I + G +A
Sbjct: 346 IKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR-DIVSWNTIITSYVICGRSSDA 404
Query: 499 IQLFERML----------------ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MK 541
+ L M ++ KP+ IT + VL C + +G+ + ++
Sbjct: 405 LLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIR 464
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
N+ + T +++VD+ + G L A + MP+ +V+ W ++ A +H
Sbjct: 465 NLLASQVTVG--SALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMH 515
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 152/552 (27%), Positives = 233/552 (42%), Gaps = 124/552 (22%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT--NSLLNMYAKV 193
M+ P F +VL + + +L GK++H+ V K G +VT N+L+NMY K
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G A VFD + ++ SWN ++S A +F++ W
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIIS----------ALCRFEE--------WEV------ 96
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK---LKLGKQIHAYIIRTEFD 310
A+ F ML + +P FTL S AC+NL K L LGKQIH R
Sbjct: 97 -------AIKAFRLMLME-GFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHW 148
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
T NAL++ YAK+G ++ A+ + ++ F
Sbjct: 149 RTFS-NNALMAMYAKLGRLDDAKSL----------LVLF--------------------- 176
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
DRD+V W +M+ + QN +A+ R MV EG KP+ T +++L S L L
Sbjct: 177 --EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRT 234
Query: 431 GKQIHASALRSGEASSLS-VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
GK+IHA ALR+ + S V +AL+ MY G + + R VF+ + R+ + W +MI
Sbjct: 235 GKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGL-WNAMIAGY 293
Query: 490 AQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTA---C--------THGGLVEQG---Q 534
AQ E+A+ LF M G+ + T ++ A C HG ++++G
Sbjct: 294 AQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETN 353
Query: 535 RYY-----NMMKNVHKIKPTPSHFASMVD--------------LLGRAG----LLQEA-- 569
RY +M + IK + F SM D + GR+ LL E
Sbjct: 354 RYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQR 413
Query: 570 ----------YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK-IAAEKLLLIEPDNSGA 618
YN + +P +P+ + ++L C L GK I A + +
Sbjct: 414 IEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTV 473
Query: 619 YSALCNLYSSCG 630
SAL ++Y+ CG
Sbjct: 474 GSALVDMYAKCG 485
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 147/301 (48%), Gaps = 33/301 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H +IK GL + +L+N+L++ Y++ I +K++FD M + + SWNTI+++Y GR
Sbjct: 341 IHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGR 400
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
A + + M + S TY+ G + + Q P T+ +VL
Sbjct: 401 SSDALLLLHEMQRIEEKS------TYD--GDYNDE-------KQVPFKPNSITLMTVLPG 445
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C +L L+ GK++H++ ++ L+ V V ++L++MYAK G +A+ VFD M ++NV +W
Sbjct: 446 CASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITW 505
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDV---------VTWNSMIAGYSQNGYDFEALGMF 265
NV++ + G+ + F+ M+ VT+ ++ A S +G E L +F
Sbjct: 506 NVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLF 565
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY----IIRTEFDATGPVGNALIS 321
M + ++P A AC + GK AY + + FD G + L +
Sbjct: 566 HKMKNEHGIEP-----APDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGA 620
Query: 322 C 322
C
Sbjct: 621 C 621
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 119/270 (44%), Gaps = 40/270 (14%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA--SSLSVSNALITMYSKA 460
M+ G P+N+ A+L + + L GKQIHA + G SS+++ N L+ MY K
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G + A +VF+ I R + VSW S+I AL + E AI+ F ML G +P T V +
Sbjct: 61 GGLGDAYKVFDRITERDQ-VSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSM 119
Query: 521 LTACT--------------HGGLVEQGQ-RYYN------MMKNVHKIKPTPS-------- 551
AC+ HG +G R ++ M + ++ S
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 552 ---HFASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGKIAA 605
+ SM+ + EA F+ M LE PD V + S+L AC L GK
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 606 EKLLLIEP--DNSGAYSALCNLYSSCGKWE 633
L + +NS SAL ++Y +CG+ E
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVE 269
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 47/151 (31%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I+ L V + ++L++ YAK ++ A++VFD+MP++ + +WN I+ AY
Sbjct: 455 GKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGM 514
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-----QVLPTQF 146
G+ K ++ +F +MV + +V PT+
Sbjct: 515 H-------------------------------GKGKESLELFEDMVAEGAKGGEVKPTEV 543
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
T ++ ASC+ HS +V GLS
Sbjct: 544 TFIALFASCS-----------HSGMVDEGLS 563
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 270/709 (38%), Positives = 411/709 (57%), Gaps = 42/709 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YA+ G + A +F + RD SW +I+ +++ G + A+R+F EM D +
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MK 204
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T +V++ + L G+K+H+ +V G + V +L+NMY K G A+ V
Sbjct: 205 PNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREV 264
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD +M +RD+V+WN MI Y QNG EAL
Sbjct: 265 FD-------------------------------KMKKRDMVSWNVMIGCYVQNGDFHEAL 293
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ L K K T S L AC++++ L G+ +H++I+ D+ V AL++
Sbjct: 294 ELYQK-LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG---DIGPARRIFDSLRDRDVVA 379
YAK G +E A+K+ + + + +A++TL+ Y G D AR++FD L RD +
Sbjct: 353 YAKCGSLEEARKVF--NAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTIC 410
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W AM+ Y QNG A+++FR M G KP+ T A+L +SL L K +HA
Sbjct: 411 WNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
S S++ V+N LI MY++ G++ A R+F + VSWT+M+ A +Q+G EA
Sbjct: 471 SESELESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGRYAEA 529
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ LF+ M G+KPD +TY +L CTHGG +EQG RY+ M +H + PT HFA+MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVD 589
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LLGR+G L +A +E+MP EPD VAW + L+ACR+H L+LG+ AAE++ ++P ++
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y A+ N+Y++ G WE A++RK M+ G+KK G S++++ K+H F HP+ D I
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST-PENTTLR 737
++ ++ ++ G+VPDT +VLHDV E KE ML +HSEK+AIAFGL+S+ +R
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIR 769
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK-GLCSCRDYW 785
++KNLRVC+DCH+A KFI ++ R+I++RD RFH F G CSC DYW
Sbjct: 770 VVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 231/484 (47%), Gaps = 74/484 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA I+ G + + +L+N Y K S A+
Sbjct: 226 GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAR----------------------- 262
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
EVF+ M RD VSW +I Y + G F A+ ++ ++ + T+ T S+
Sbjct: 263 --------EVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSI 314
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C+++ L+ G+ VHS +++ GL V V +L+NMYAK G A+ VF+ M+ ++
Sbjct: 315 LGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDA 374
Query: 212 SSWNVVVSLHIHSG---RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+W+ ++ + +G AR FD++ RD + WN+MI Y QNG A+ +F M
Sbjct: 375 VAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREM 434
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ LKPD T + L ACA+L +L K +HA I +E ++ V N LI+ YA+ G
Sbjct: 435 TGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGS 494
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+E A R+F + +++ VV+WTAM+ +
Sbjct: 495 LE---------------------------------EAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSL 447
Q G +A++LF+ M EG KP++ T +++L V + SL+ G + A G A +
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTA 581
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFER 504
A++ + ++G + A+ + + + + V+W + + A HG LGE A ER
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAA---ER 638
Query: 505 MLEL 508
+ EL
Sbjct: 639 VYEL 642
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 150/579 (25%), Positives = 264/579 (45%), Gaps = 114/579 (19%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T +VL SC++ GD++ G+ +H + + V N+L++MY K + A++V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 203 FDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
F+ M R +NV SW N+MIA Y+QNG+ E
Sbjct: 65 FESMDWRQRNVVSW-------------------------------NAMIAAYAQNGHSTE 93
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL ++ M L D T S L AC++L + G++IH + + D+ + NAL+
Sbjct: 94 ALVLYWRM-NLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANALV 149
Query: 321 SCYAKVGGVEIAQKIVE------------------QSG--------------------IS 342
+ YA+ G V A+++ + QSG +
Sbjct: 150 TMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTT 209
Query: 343 YLNVIA-----------------------------FTTLLDGYIKIGDIGPARRIFDSLR 373
Y+NVI+ T L++ Y K G AR +FD ++
Sbjct: 210 YINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMK 269
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
RD+V+W M+ Y QNG +A+EL++ + EG K T ++L SS+ +L G+
Sbjct: 270 KRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRL 329
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H+ L G S ++V+ AL+ MY+K G++ AR+VFN + R + V+W+++I A A +G
Sbjct: 330 VHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNG 388
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G++A + + LG + D I + ++T G + + M +KP F
Sbjct: 389 YGKDARKARKVFDRLGSR-DTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTF 447
Query: 554 ASMVDL---LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
++++ LGR ++ + I LE +VV +L++ +L+ AE+L
Sbjct: 448 IAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE----EAERLFA 503
Query: 611 IEPDNS-GAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
+ + +++A+ +S G++ +A ++ + M GVK
Sbjct: 504 AAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 193/408 (47%), Gaps = 80/408 (19%)
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PD T + L +C++ + G+ +H I + F+ VGNALIS Y K
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKC-------- 55
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAMLVGYEQNGL 392
+L+D AR +F+S+ R R+VV+W AM+ Y QNG
Sbjct: 56 ---------------DSLVD----------ARSVFESMDWRQRNVVSWNAMIAAYAQNGH 90
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+ +A+ L+ M +G ++ T ++L SSLA G++IH SG S S++NA
Sbjct: 91 STEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANA 147
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+TMY++ G++ A+R+F + R ET SW ++I+A +Q G A+++F+ M + +KP
Sbjct: 148 LVTMYARFGSVGDAKRMFQSLQTRDET-SWNAVILAHSQSGDWSGALRIFKEM-KCDMKP 205
Query: 513 DHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
+ TY+ V++ + ++ +G++ + ++ N + +++++ G+ G EA
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVA--TALINMYGKCGSSHEARE 263
Query: 572 FIENMPLEPDVVAWG-----------------------------------SLLSACRVHK 596
+ M + D+V+W S+L AC K
Sbjct: 264 VFDKMK-KRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 597 NLDLGKIAAEKLLLIEPDNSGAY-SALCNLYSSCGKWEDAANIRKSMK 643
L G++ +L D+ A +AL N+Y+ CG E+A + +MK
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK 370
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/709 (38%), Positives = 411/709 (57%), Gaps = 42/709 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YA+ G + A +F + RD SW +I+ +++ G + A+R+F EM D V
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VK 204
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T +V++ + L G+K+H+ +V G + V +L+NMY K G A+ V
Sbjct: 205 PNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREV 264
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD +M +RD+V+WN MI Y NG EAL
Sbjct: 265 FD-------------------------------KMKKRDMVSWNVMIGCYVLNGDFHEAL 293
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ L K K T S L AC++++ L G+ +H++I+ D+ V AL++
Sbjct: 294 ELYQK-LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG---DIGPARRIFDSLRDRDVVA 379
YAK G +E A+K+ + + + +A++TL+ Y G D AR++FD L RD ++
Sbjct: 353 YAKCGSLEEARKVF--NAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTIS 410
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W AM+ Y QNG A+++FR M G KP+ T A+L +SL L K +HA
Sbjct: 411 WNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
S S++ V+N LI MY++ G++ A R+F + VSWT+M+ A +Q+G EA
Sbjct: 471 SESELESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAAFSQYGRYAEA 529
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ LF+ M G+KPD +TY +L CTHGG +EQG RY+ M +H + PT HFA+MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVD 589
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LLGR+G L +A +E+MP EPD VAW + L+ACR+H L+LG+ AAE++ ++P ++
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y A+ N+Y++ G WE A++RK M+ G+KK G S++++ K+H F HP+ D I
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST-PENTTLR 737
++ ++ ++ G+VPDT +VLHDV E KE ML +HSEK+AIAFGL+S+ +R
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIR 769
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK-GLCSCRDYW 785
++KNLRVC+DCH+A KFI ++ R+I+VRD RFH F G CSC DYW
Sbjct: 770 VVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 193/408 (47%), Gaps = 80/408 (19%)
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PD T + L +C++ + G+ +H I + F+ VGNALIS Y K
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKC-------- 55
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAMLVGYEQNGL 392
+L+D AR +F+S+ R R+VV+W AM+ Y QNG
Sbjct: 56 ---------------DSLVD----------ARSVFESMDWRQRNVVSWNAMIAAYAQNGH 90
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+ +A+ L+ M +G ++ T ++L SSLA G++IH SG S S++NA
Sbjct: 91 STEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANA 147
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+TMY++ G++ A+R+F + R ET SW ++I+A +Q G A+++F+ M + +KP
Sbjct: 148 LVTMYARFGSVGDAKRMFQSLQTRDET-SWNAVILAHSQSGDWSGALRIFKEM-KCDVKP 205
Query: 513 DHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
+ TY+ V++ + ++ +G++ + ++ N + +++++ G+ G EA
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVA--TALINMYGKCGSSHEARE 263
Query: 572 FIENMPLEPDVVAWG-----------------------------------SLLSACRVHK 596
+ M + D+V+W S+L AC K
Sbjct: 264 VFDKMK-KRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 597 NLDLGKIAAEKLLLIEPDNSGAY-SALCNLYSSCGKWEDAANIRKSMK 643
L G++ +L D+ A +AL N+Y+ CG E+A + +MK
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK 370
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 185/390 (47%), Gaps = 49/390 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+LVH+ I++ GL V + +L+N YAK S+ A+KVF+ M + +W+T++ AYA
Sbjct: 327 GRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 92 QG---RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFT 147
G A +VF+ + +RD++SW +I TY + G A+++F EM L P T
Sbjct: 387 NGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVT 446
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+VL +C +LG LS K +H+ + ++ L V VTN+L+NMYA+ G A+ +F +
Sbjct: 447 FIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAK 506
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K V SW +M+A +SQ G EAL +F
Sbjct: 507 EKTVVSW-------------------------------TAMVAAFSQYGRYAEALDLFQE 535
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN---ALISCYA 324
M + +KPD T S L C + L+ G + + E A P + A++
Sbjct: 536 MDLE-GVKPDDVTYTSILFVCTHGGSLEQGWRY--FTDMAELHALAPTADHFAAMVDLLG 592
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLD-----GYIKIGDIGPARRIFDSLRDRDVVA 379
+ G + A++++E + +A+ T L G +++G+ A R+++ L
Sbjct: 593 RSGRLFDAKELLESMPFE-PDPVAWMTFLTACRIHGKLELGE-AAAERVYE-LDPSSTAP 649
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
+ AM Y +G+ + + + M G K
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLK 679
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/694 (38%), Positives = 416/694 (59%), Gaps = 37/694 (5%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-VTNS 185
K+ +R V+++ + T T ++ C +++ K++ S + + + N
Sbjct: 4 KSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQ 63
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
LL++YAK G A+ +FD M +++ SWN ++S + SG + +A FD+M RD V++
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N+ IAG+S N E+L +F M ++ +P ++T+ S L+A A L L+ GKQIH II
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREG-FEPTEYTIVSILNASAQLSDLRYGKQIHGSII 182
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVE-----------------------QSGIS 342
F + NAL YAK G +E A+ + + + I
Sbjct: 183 VRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIG 242
Query: 343 YL----------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
L + + +T++ Y + G + ARR+F +++D+V WTAM+VGY +NG
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGR 302
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+DA+ LF M+ E +P++YTLS+++S + LASL HG+ +H ++ +G ++L VS+A
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSA 362
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MYSK G I+ AR VFNL+ R VSW +MIV AQ+G ++A++LFE ML+ KP
Sbjct: 363 LIDMYSKCGFIDDARSVFNLMPTRN-VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKP 421
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D++T++G+L+AC H +EQGQ Y++ + N H + PT H+A MV+LLGR G +++A
Sbjct: 422 DNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL 481
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I+NM +PD + W +LLS C ++ ++AA L ++P + Y L N+Y+S G+W
Sbjct: 482 IKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRW 541
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+D A++R MK VKK GFSW++I N+VH F ED HP+ + IY K+ + +++E
Sbjct: 542 KDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEE 601
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT-LRIMKNLRVCNDCHSA 751
GF P+T VLHDV ED K + + HSEKLA+AFGLI P + +RI+KN+R+CNDCH
Sbjct: 602 GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEF 661
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KF +++ R+I++RD+ RFHHF G CSC D W
Sbjct: 662 MKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 238/481 (49%), Gaps = 70/481 (14%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
FL N L++ YAK + A+ +FD+M + + SWN +LSAYAK G + F+ MP R
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
DSVS+ T I ++ + ++ +F M ++ PT++T+ S+L + L DL GK++H
Sbjct: 119 DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIH 178
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS--------- 219
++ G V + N+L +MYAK G+ A+ +FD + KN+ SWN+++S
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE 238
Query: 220 -----LH---------------------IHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
LH GR+D AR F + E+D+V W +M+ GY+
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYA 298
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+NG + +AL +F ML + ++PD +TL+S +S+CA L L G+ +H I +
Sbjct: 299 KNGREEDALLLFNEMLLE-HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V +ALI Y+K G ++ AR +F+ +
Sbjct: 358 LVSSALIDMYSKCGFID---------------------------------DARSVFNLMP 384
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
R+VV+W AM+VG QNG +KDA+ELF +M+++ KP+N T +LS ++ G++
Sbjct: 385 TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQE 444
Query: 434 IHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
S + G +L ++ + + G I A + + + + W++++ +
Sbjct: 445 YFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTK 504
Query: 493 G 493
G
Sbjct: 505 G 505
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 158/331 (47%), Gaps = 74/331 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +++S L A L S+L+ GK +H II +VF+ N+L + YAK
Sbjct: 153 PTEYTIVSILNASAQL--SDLR-----YGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGE 205
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQ------------------------------- 92
I A+ +FD + K L SWN ++S YAK
Sbjct: 206 IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265
Query: 93 ----GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
GR+D A VF+ +D V WT ++V Y + GR ++A+ +F EM+ + + P +T+
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+SV++SC L L G+ VH + GL+ + V+++L++MY+K G A++VF+ M
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+NV SW N+MI G +QNG+D +AL +F NM
Sbjct: 386 RNVVSW-------------------------------NAMIVGCAQNGHDKDALELFENM 414
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
L+ KPD T LSAC + ++ G++
Sbjct: 415 LQ-QKFKPDNVTFIGILSACLHCNWIEQGQE 444
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 271/689 (39%), Positives = 399/689 (57%), Gaps = 59/689 (8%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+F+ MP RD VSW ++ Y + G K A +F EM P + +++
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------PCKNSIS----------- 94
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
N +L Y + G A+ +F+ + SWN ++
Sbjct: 95 ----------------------WNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGG 132
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
++ RL AR FD+M ERD V+WN+MI+GY+QNG EA +F + S D FT
Sbjct: 133 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF-----EESPVRDVFT 187
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG----NALISCYAKVGGVEIAQKIV 336
+ +S L +++ FD NA+I+ Y + ++ A+++
Sbjct: 188 WTAMVSGYVQNGMLDEARRV--------FDGMPEKNSVSWNAIIAGYVQCKRMDQARELF 239
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
E + NV ++ T++ GY + GDI AR FD + RD ++W A++ GY Q+G ++A
Sbjct: 240 E--AMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 297
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ LF M R+G + N T ++ LS + +A+L+ GKQ+H +++G S V NAL+ M
Sbjct: 298 LHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVM 357
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y K GNI+ A VF I +E VSW +MI A+HG G+EA+ LFE M + GI PD +T
Sbjct: 358 YCKCGNIDDAYIVFEGIE-EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVT 416
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
VGVL+AC+H GLV++G Y+ M + I H+ M+DLLGRAG L +A N ++NM
Sbjct: 417 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 476
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P EPD WG+LL A R+H N +LG+ AA+ + +EPDNSG Y L NLY++ G+W D
Sbjct: 477 PFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVG 536
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
+R M+ GVKK G+SWV++QNK+H F V D +HP+RD IY + ++ ++K+ G+V
Sbjct: 537 RMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVS 596
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
T VLHDVEE+ K ML++HSEKLA+AFG+++ P +R++KNLRVC DCH+A+K I
Sbjct: 597 STKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHIS 656
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+V R I++RD+ RFHHF G CSC DYW
Sbjct: 657 KIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 251/541 (46%), Gaps = 99/541 (18%)
Query: 28 NPFVGKLVHARIIKCGLHLSV---FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
P + + R LH S FL+ + + ++ A+ +FD+MP + + SWN
Sbjct: 7 QPHAKRTMRLRSPPLQLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNA 66
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV--- 141
+LS YA+ G + A E+F+ MP ++S+SW ++ Y + GR ++A R+F ++
Sbjct: 67 MLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISW 126
Query: 142 ----------------------LPTQFTVT--SVLASCTALGDLSAGKKVHS-------F 170
+P + V+ ++++ G+L +++ F
Sbjct: 127 NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVF 186
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEM----------------------MAKAVFDGMRL 208
+SG V N +L+ +V D M A+ +F+ M
Sbjct: 187 TWTAMVSGYVQ--NGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC 244
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+NVSSWN +++ + +G + AR FD+M +RD ++W ++IAGY+Q+GY EAL +F M
Sbjct: 245 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEM 304
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+D + ++ T STLS CA + L+LGKQ+H +++ ++ VGNAL+ Y K G
Sbjct: 305 KRDGE-RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGN 363
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ A + E GI V+++ T++ GY +
Sbjct: 364 IDDAYIVFE--GIEEKEVVSWNTMIAGYAR------------------------------ 391
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSL 447
+G K+A+ LF SM + G P++ T+ +LS S +D G + S + G ++
Sbjct: 392 -HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANS 450
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFER 504
+I + +AG ++ A+ + + + + +W +++ A HG LGE+A ++
Sbjct: 451 KHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 510
Query: 505 M 505
M
Sbjct: 511 M 511
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 213/460 (46%), Gaps = 69/460 (15%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
L AR FDQM ERDVV+WN+M++GY+QNGY EA +F M P K +++
Sbjct: 46 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-------PCKNSISWNGM 98
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI----S 342
A ++ ++ + + +++ LIS +GG ++V+ GI
Sbjct: 99 LAAYVQNGRIEDARRLFESKADWE--------LISWNCMMGGYVKRNRLVDARGIFDRMP 150
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
+ +++ T++ GY + G++ A+R+F+ RDV WTAM+ GY QNG+ +A +F
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M P+ N+ + +A+++ +D +++ + ++S N +IT Y++ G+
Sbjct: 211 M----PEKNSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVSSWNTMITGYAQNGD 262
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
I AR F+ + R +++SW ++I AQ G GEEA+ LF M G + + T+ L+
Sbjct: 263 IAQARNFFDRMPQR-DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLS 321
Query: 523 ACT-----------HGGLVEQGQR-----------YYNMMKNVHKI--------KPTPSH 552
C HG +V+ G Y N+ +
Sbjct: 322 TCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVS 381
Query: 553 FASMVDLLGRAGLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
+ +M+ R G +EA E+M + PD V +LSAC +D G E
Sbjct: 382 WNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKG---TEYFY 438
Query: 610 LIEPD-----NSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
+ D NS Y+ + +L G+ +DA N+ K+M +
Sbjct: 439 SMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPF 478
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 180/416 (43%), Gaps = 100/416 (24%)
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
L G ++ ++ AR +FD + +RDVV+W AML GY QNG K+A E+F M P N+
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNS 92
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFN 471
+ + ML+ A + +G+ A L +A +S N ++ Y K + AR +F+
Sbjct: 93 ISWNGMLA-----AYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFD 147
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ R E VSW +MI AQ+G EA +LFE E ++ D T+ +++ G+++
Sbjct: 148 RMPERDE-VSWNTMISGYAQNGELLEAQRLFE---ESPVR-DVFTWTAMVSGYVQNGMLD 202
Query: 532 QGQRYYNMMKNVHKI----------------------KPTP----SHFASMVDLLGRAGL 565
+ +R ++ M + + + P S + +M+ + G
Sbjct: 203 EARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGD 262
Query: 566 LQEAYNFIENMPLEPDVVAWG-----------------------------------SLLS 590
+ +A NF + MP + D ++W S LS
Sbjct: 263 IAQARNFFDRMP-QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLS 321
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAY--SALCNLYSSCGKWEDAANIRKSMKYVGVK 648
C L+LGK +++ + SG Y +AL +Y CG +DA + + G++
Sbjct: 322 TCAEIAALELGKQVHGRVVKAGLE-SGCYVGNALLVMYCKCGNIDDAYIV-----FEGIE 375
Query: 649 KTQGFSWVQI--QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ + SW + H FG E + +++ +K+ G +PD +++
Sbjct: 376 EKEVVSWNTMIAGYARHGFGKEALM-------------LFESMKKTGILPDDVTMV 418
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/695 (39%), Positives = 410/695 (58%), Gaps = 70/695 (10%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLA 153
L+ A +VF+ M ++ V+WT +I + G AI +F+EM V +P +FT+T +++
Sbjct: 211 LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLIS 270
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
C + LS GK++HS+V+++GL + V SL++MYAK G
Sbjct: 271 VCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCG------------------- 311
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG--YDFEALGMFANMLKD 271
+ AR FD M E +V++W +++ GY + G Y+ EA+ MF+NML
Sbjct: 312 ------------LVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQ 359
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ P+ FT + L ACA+L G+Q+H I+ A VGN L+S YAK G +E
Sbjct: 360 GGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRME- 418
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML-VGYEQN 390
AR+ FD L ++++V+ T + +
Sbjct: 419 --------------------------------SARKCFDVLFEKNLVSETVVDDTNVKDF 446
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
LN + +L R + G +++T +++LS ++ + ++ G+QIHA ++ G + LSV+
Sbjct: 447 NLNSEQ-DLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVN 505
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NALI+MYSK GN AA +VFN + ++WTS+I A+HG +A++LF MLE G+
Sbjct: 506 NALISMYSKCGNKEAALQVFNDME-DCNVITWTSIINGFAKHGFASKALELFYNMLETGV 564
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +TY+ VL+AC+H GL+++ +++ M++ H I P H+A MVDLLGR+GLL EA
Sbjct: 565 KPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAI 624
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
FI +MP + D + W + L +CRVH+N LG+ AA+ +L EP + Y L NLY++ G
Sbjct: 625 EFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEG 684
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+WED A IRK+MK + K G SW++++N+VH F V D LHP+ IY K+ ++ +IK
Sbjct: 685 RWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIK 744
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
+G+VP+T VLHDVE++ KEQ L HSEKLA+AF LISTP +R+ KNLRVC DCH+
Sbjct: 745 NVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHT 804
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
AIK+I + REIVVRDA RFHH K G CSC DYW
Sbjct: 805 AIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/587 (26%), Positives = 278/587 (47%), Gaps = 108/587 (18%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL+ ++++N +GKL+H ++ L L L NSL+ Y+K+
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKS----------------- 100
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
N ++A++ +F M N RD VS+++II + A+ MF ++
Sbjct: 101 ----NDPITAFS----------IFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQL 146
Query: 137 V-QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAK-- 192
+ QD V P ++ T+V+ +C G G + FV+KTG V V L++M+ K
Sbjct: 147 LLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGC 206
Query: 193 -VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
+ D A+ VFD MR KNV VTW MI
Sbjct: 207 SLADLESARKVFDKMREKNV-------------------------------VTWTLMITR 235
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
+Q GY+ EA+ +F ML S PD+FTL +S CA ++ L LGK++H+++IR+
Sbjct: 236 LAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVL 295
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
VG +L+ YAK G V+ A+K+ + G+ NV+++T L++GY++ G
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFD--GMREHNVMSWTALVNGYVRGGG---------- 343
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDH 430
GYE ++A+ +F +M+ +G PN +T S +L +SL D
Sbjct: 344 --------------GYE-----REAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDF 384
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM-IVAL 489
G+Q+H ++ G ++ V N L+++Y+K+G + +AR+ F+++ + + VS T + +
Sbjct: 385 GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVL-FEKNLVSETVVDDTNV 443
Query: 490 AQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
L E Q +R +E +G TY +L+ G + +G++ + M+ + +
Sbjct: 444 KDFNLNSE--QDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKI-GFRT 500
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
S +++ + + G + A +M + +V+ W S+++ H
Sbjct: 501 DLSVNNALISMYSKCGNKEAALQVFNDME-DCNVITWTSIINGFAKH 546
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 183/383 (47%), Gaps = 65/383 (16%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T + +L C + GK +H + + L + NSL+ +Y+K D + A ++F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+ +RDVV+++S+I+ ++ N +A+ MF
Sbjct: 114 -----------------------------ENSKRDVVSYSSIISCFANNRNCLKAVEMFD 144
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYAK 325
+L + P+++ + + AC K G + ++++T FD+ VG LI + K
Sbjct: 145 QLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVK 204
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +A D+ AR++FD +R+++VV WT M+
Sbjct: 205 --GCSLA----------------------------DLESARKVFDKMREKNVVTWTLMIT 234
Query: 386 GYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Q G N +A++LF M V G P+ +TL+ ++SV + + L GK++H+ +RSG
Sbjct: 235 RLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLV 294
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG--EEAIQLF 502
L V +L+ MY+K G + AR+VF+ + +SWT+++ + G G EA+++F
Sbjct: 295 LDLCVGCSLVDMYAKCGLVQEARKVFDGMR-EHNVMSWTALVNGYVRGGGGYEREAMRMF 353
Query: 503 ERM-LELGIKPDHITYVGVLTAC 524
M L+ G+ P+ T+ GVL AC
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKAC 376
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 207/465 (44%), Gaps = 78/465 (16%)
Query: 49 FLKNSLMNFYAKTESISYAKK----VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNL 104
F L++ A+ + +S K+ V V LC +++ YAK G + A +VF+
Sbjct: 263 FTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDG 322
Query: 105 MPNRDSVSWTTIIVTY--NEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDL 161
M + +SWT ++ Y G + A+RMF M +Q V P FT + VL +C +L D
Sbjct: 323 MREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDF 382
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
G++VH +K GLS V N L+++YAK G A+ FD + KN+ S VV +
Sbjct: 383 DFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTN 442
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
+ L+ +Q ++R+V S ++ FT
Sbjct: 443 VKDFNLNS-----EQDLDREVEYVGSGVS---------------------------SFTY 470
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
AS LS A + + G+QIHA +++ F V NALIS Y+K G E A ++ +
Sbjct: 471 ASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFND--M 528
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
NVI +T++++G+ K +G A+ELF
Sbjct: 529 EDCNVITWTSIINGFAK-------------------------------HGFASKALELFY 557
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS--GEASSLSVSNALITMYSK 459
+M+ G KPN+ T A+LS S + +D + H +++R G + ++ + +
Sbjct: 558 NMLETGVKPNDVTYIAVLSACSHVGLIDEAWK-HFTSMRDNHGIVPRMEHYACMVDLLGR 616
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQL 501
+G ++ A N + + + + W + + + H LGE A ++
Sbjct: 617 SGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKM 661
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 63/260 (24%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH + IK GL + N L++ YAK+ + A+K FD + K L S + K
Sbjct: 385 GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVK 444
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
FNL +D + VE V V + FT S+
Sbjct: 445 D---------FNLNSEQD--------------------LDREVEYVGSGV--SSFTYASL 473
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L+ +G + G+++H+ VVK G ++V N+L++MY+K G++ A VF+ M N
Sbjct: 474 LSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCN- 532
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
V+TW S+I G++++G+ +AL +F NML +
Sbjct: 533 ------------------------------VITWTSIINGFAKHGFASKALELFYNML-E 561
Query: 272 SSLKPDKFTLASTLSACANL 291
+ +KP+ T + LSAC+++
Sbjct: 562 TGVKPNDVTYIAVLSACSHV 581
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA ++K G + + N+L++ Y+K + A +VF++M + +W +I++ +AK
Sbjct: 486 GEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAK 545
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
G A E+F M PN V++ ++ + +G A + F M
Sbjct: 546 HGFASKALELFYNMLETGVKPN--DVTYIAVLSACSHVGLIDEAWKHFTSM 594
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 290/782 (37%), Positives = 445/782 (56%), Gaps = 74/782 (9%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
S L + L++ + R+ GK +HA IK + S +L N + Y+K +S A++V
Sbjct: 6 SLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRV 65
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD + S+NT++SAYAK+ +++A ++F+ MP DSVS+ T+I Y G + A
Sbjct: 66 FDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAF 125
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++F+EM + + FT++ ++ +C ++ +++H+ V TGL V+V N+L+ Y
Sbjct: 126 QLFLEMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSY 183
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE-RDVVTWNSMI 249
+K +G L AR F + E RD V+WNSM+
Sbjct: 184 SK-------------------------------NGFLKEARRIFHWLSEDRDEVSWNSMV 212
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
Y Q+ +AL ++ M L D FTLAS L+A N++ L G Q HA +I++ +
Sbjct: 213 VAYMQHREGSKALELYLEMTV-RGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGY 271
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
VG+ LI Y+K GG +LD R++F
Sbjct: 272 HQNSHVGSGLIDLYSKCGGC----------------------MLD----------CRKVF 299
Query: 370 DSLRDRDVVAWTAMLVGYE-QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
D + + D+V W M+ GY L+ +A+E FR + G +P++ +L ++S S+++S
Sbjct: 300 DEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSP 359
Query: 429 DHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G+Q+H AL+ S+ +SV+NALI MYSK GN+ A+ +F+ + TVS+ SMI
Sbjct: 360 SQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIA 418
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQHG+G +++ LF+RMLE+G P +IT++ VL AC H G VE G+ Y+NMMK I+
Sbjct: 419 GYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIE 478
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P HF+ M+DLLGRAG L EA IE +P +P W +LL ACR+H N++L AA +
Sbjct: 479 PEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANR 538
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL ++P N+ Y L N+YS G+ +DAA++RK M+ GVKK G SW+++ ++H+F
Sbjct: 539 LLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVA 598
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV--KEQMLR--HHSEKLAI 723
ED HP I + ++ +IK++G+ P+ S L ++ V +E+ LR HHSEKLA+
Sbjct: 599 EDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAV 658
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+FGL+ST E + + KNLR+C DCH+AIK+I ++V REI VRD+ RFH FK G CSC
Sbjct: 659 SFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGG 718
Query: 784 YW 785
YW
Sbjct: 719 YW 720
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 280/732 (38%), Positives = 418/732 (57%), Gaps = 56/732 (7%)
Query: 58 YAKTESISYAKKVFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTT 115
YA+ + +A+KVFDE P+ +T+ SWN +++AY + + A +F MP R++VSW
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNG 91
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+I + + G A R+F +P + V+
Sbjct: 92 LISGHIKNGMLSEARRVF------DTMPDRNVVS-------------------------- 119
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
S++ Y + GD A+ +F M KNV SW V++ + GR+D AR FD
Sbjct: 120 -------WTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFD 172
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
M E+DVV +MI GY + G EA +F M K + + T + +S A K+
Sbjct: 173 MMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVV-----TWTAMVSGYARNGKVD 227
Query: 296 LGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
+ +++ + R E T A++ Y G + A + + + V+ ++
Sbjct: 228 VARKLFEVMPERNEVSWT-----AMLLGYTHSGRMREASSLFDAMPVK--PVVVCNEMIM 280
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
G+ G++ ARR+F +++RD W+AM+ YE+ G +A+ LFR M REG N +
Sbjct: 281 GFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPS 340
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
L ++LSV SLASLDHGKQ+HA +RS L V++ LITMY K GN+ A++VFN
Sbjct: 341 LISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFP 400
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
+ + V W SMI +QHGLGEEA+ +F M G+ PD +T++GVL+AC++ G V++G
Sbjct: 401 LK-DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGL 459
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+ MK ++++P H+A +VDLLGRA + EA +E MP+EPD + WG+LL ACR
Sbjct: 460 ELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRT 519
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H LDL ++A EKL +EP N+G Y L N+Y+ G+W D +R+ +K V K G S
Sbjct: 520 HMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCS 579
Query: 655 WVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM 713
W++++ KVH+F G + HP++ I + K+ ++E G+ PD + VLHDV+E+ K
Sbjct: 580 WIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHS 639
Query: 714 LRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHH 773
L +HSEKLA+A+GL+ PE +R+MKNLRVC DCHSAIK I K+ REI++RDA RFHH
Sbjct: 640 LGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHH 699
Query: 774 FKKGLCSCRDYW 785
FK G CSC+DYW
Sbjct: 700 FKDGHCSCKDYW 711
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 229/495 (46%), Gaps = 44/495 (8%)
Query: 32 GKLVHARII--KCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
G+L HAR + + L H +V N+++ Y + A +F++MP + SWN ++S
Sbjct: 36 GQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISG 95
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
+ K G L A VF+ MP+R+ VSWT+++ Y G A R+F M V+ +
Sbjct: 96 HIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV----SW 151
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
T +L G + +K+ + + + V VTN ++ Y + G A+A+FD M
Sbjct: 152 TVMLGGLLQEGRVDDARKLFDMMPEKDV---VAVTN-MIGGYCEEGRLDEARALFDEMPK 207
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+NV +W +VS + +G++D+AR F+ M ER+ V+W +M+ GY+ +G EA +F M
Sbjct: 208 RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAM 267
Query: 269 LKDSSLKPDKFTLASTLSACAN------------------------------LEKLKLGK 298
+ ++ + L+ + LE L L +
Sbjct: 268 PVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFR 327
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
++ + F + V + +S + G ++ ++V L V + L+ Y+K
Sbjct: 328 RMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVA--SVLITMYVK 385
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
G++ A+++F+ +DVV W +M+ GY Q+GL ++A+ +F M G P++ T +
Sbjct: 386 CGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGV 445
Query: 419 LSVSSSLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
LS S + G ++ + + + L+ + +A +N A ++ +
Sbjct: 446 LSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEP 505
Query: 478 ETVSWTSMIVALAQH 492
+ + W +++ A H
Sbjct: 506 DAIVWGALLGACRTH 520
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 199/443 (44%), Gaps = 66/443 (14%)
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ--MIERDVVTWNSMIAG 251
G ++ + + +RL+ +S + ++ + +G+LD AR FD+ + R V +WN+M+A
Sbjct: 5 GRAILRRCMMLQVRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAA 64
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y + EAL +F M P + T++
Sbjct: 65 YFEARQPREALLLFEKM-------PQRNTVS----------------------------- 88
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
N LIS + K G + A+++ + + NV+++T+++ GY++ GD+ A R+F
Sbjct: 89 ----WNGLISGHIKNGMLSEARRVFDT--MPDRNVVSWTSMVRGYVRNGDVAEAERLFWH 142
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ ++VV+WT ML G Q G DA +LF M P+ + ++ M+ LD
Sbjct: 143 MPHKNVVSWTVMLGGLLQEGRVDDARKLFDMM----PEKDVVAVTNMIGGYCEEGRLDEA 198
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ + + ++ A+++ Y++ G ++ AR++F ++ R E VSWT+M++
Sbjct: 199 RALFDEMPK----RNVVTWTAMVSGYARNGKVDVARKLFEVMPERNE-VSWTAMLLGYTH 253
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
G EA LF+ M +KP + ++ G V++ +R + MK
Sbjct: 254 SGRMREASSLFDAM---PVKPV-VVCNEMIMGFGLNGEVDKARRVFKGMKERDN-----G 304
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL---LSACRVHKNLDLGKIAAEKL 608
+++M+ + R G EA M E + + SL LS C +LD GK +L
Sbjct: 305 TWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQL 364
Query: 609 LLIEPDNS-GAYSALCNLYSSCG 630
+ E D S L +Y CG
Sbjct: 365 VRSEFDQDLYVASVLITMYVKCG 387
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
N PSLIS L L + GK VHA++++ +++ + L+ Y K ++
Sbjct: 337 NFPSLISVLSVCVSLASLDH-------GKQVHAQLVRSEFDQDLYVASVLITMYVKCGNL 389
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTY 120
AK+VF+ P+K + WN++++ Y++ G + A VF+ M + D V++ ++
Sbjct: 390 VRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSAC 449
Query: 121 NEIGRFKNAIRMFVEM-VQDQVLP 143
+ G+ K + +F M + QV P
Sbjct: 450 SYSGKVKEGLELFETMKCKYQVEP 473
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/744 (36%), Positives = 430/744 (57%), Gaps = 28/744 (3%)
Query: 46 LSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM 105
+ V +N + + + + A+++F MP ++ ++NT+L+ YA GRL A F +
Sbjct: 105 MEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI 164
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAG 164
P DS S+ T++ + +F EM V+D V + +++S G +S
Sbjct: 165 PRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSV-----SYNVMISSHANHGLVSLA 219
Query: 165 KKVHSFVV---KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
+ H F + K +S N +L Y + G A+ +FD + SWN +++ +
Sbjct: 220 R--HYFDLAPEKDAVS-----WNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGY 272
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
+ +++ A+ F++M +RDVV+WN+M++GY++ G EA +F D + D FT
Sbjct: 273 VQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF-----DVAPIRDVFTW 327
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+ +S A L+ K++ + D NA+++ Y + +E A+++ + +
Sbjct: 328 TAIVSGYAQNGMLEEAKRVFDAMP----DKNAVSWNAMMAAYVQRRMMEEAKELFD--AM 381
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
NV ++ T+L GY + G + AR IF + +D V+W AML Y Q G +++ ++LF+
Sbjct: 382 PCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFK 441
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M R G N + +LS + +A+L+ G Q+H+ +++G V NAL+ MY K G
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCG 501
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
++ A F + R + VSW +MI A+HG G+EA+++F+ M + KPD IT VGVL
Sbjct: 502 SMEEAHSAFEEMEER-DVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVL 560
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC+H GLVE+G Y+ M + P H+ M+DLLGRAG L EA N +++MP EPD
Sbjct: 561 AACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPD 620
Query: 582 VVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
WG+LL A R+H+N +LG+ AAEK+ +EP+N+G Y L N+Y+S GKW D +R
Sbjct: 621 STMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHI 680
Query: 642 MKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
M GVKK GFSW+++QNKVH F V D +HP+R+ IY + + +K+ G+V T V
Sbjct: 681 MHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMV 740
Query: 702 LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDR 761
LHDVEE+ KE ML++HSEKLA+A+G++ P +R++KNLRVC DCH+A K I + R
Sbjct: 741 LHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGR 800
Query: 762 EIVVRDATRFHHFKKGLCSCRDYW 785
I++RD+ RFHHF+ G CSC DYW
Sbjct: 801 LIILRDSNRFHHFRDGSCSCGDYW 824
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 213/464 (45%), Gaps = 75/464 (16%)
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A A G V N ++ H+ +GR+ A F M R T+N+M+AGY+ NG
Sbjct: 95 ADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRL 154
Query: 259 FEALGMFANMLKDSSLK--------------------------PDKFTLASTLSACANLE 292
+AL F ++ + S D + +S+ AN
Sbjct: 155 PQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHG 214
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI----VEQSGISY----- 343
+ L + H + + E DA N +++ Y + G ++ A+++ E IS+
Sbjct: 215 LVSLAR--HYFDLAPEKDAVS--WNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMA 270
Query: 344 --------------------LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+V+++ T++ GY + GD+ ARR+FD RDV WTA+
Sbjct: 271 GYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAI 330
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ GY QNG+ ++A +F +M P N + +AM++ ++ K++ +
Sbjct: 331 VSGYAQNGMLEEAKRVFDAM----PDKNAVSWNAMMAAYVQRRMMEEAKEL----FDAMP 382
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+++ N ++T Y++AG ++ AR +F ++ +++ VSW +M+ A +Q G EE +QLF+
Sbjct: 383 CRNVASWNTMLTGYAQAGMLDEARAIFGMMP-QKDAVSWAAMLAAYSQIGFSEETLQLFK 441
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M G + + VL+ C +E G Q + ++K + + + +++ + +
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGN--ALLAMYFK 499
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
G ++EA++ E M E DVV+W ++++ H GK A E
Sbjct: 500 CGSMEEAHSAFEEME-ERDVVSWNTMIAGYARH---GFGKEALE 539
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H+R+IK G + F+ N+L+ Y K S+ A F+EM + + SWNT+++ YA+
Sbjct: 471 GMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYAR 530
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
G A EVF+ M D ++ ++ + G + I F M +D + T+
Sbjct: 531 HGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATK 588
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/737 (36%), Positives = 437/737 (59%), Gaps = 47/737 (6%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
++ +L++ + + + +A ++F ++ T+ N++L+ YAK +D A E F M RD
Sbjct: 165 VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD 224
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
VSW +I ++ GR + A+ + VEM + V T TS L +C L L GK++H+
Sbjct: 225 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 284
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
V+++ V ++L+ +YAK G AK VF+ ++ +N SW V
Sbjct: 285 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV------------- 331
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
+I G Q +++ +F N ++ + D+F LA+ +S C
Sbjct: 332 ------------------LIGGSLQYECFSKSVELF-NQMRAELMAIDQFALATLISGCF 372
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
N L LG+Q+H+ +++ + V N+LIS YAK G ++ A+ + S +S +++++
Sbjct: 373 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF--SSMSERDIVSW 430
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV-REGP 408
T+++ Y +IG+I AR FD + R+ + W AML Y Q+G +D ++++ +M+ ++
Sbjct: 431 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 490
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
P+ T + + + + G QI +++G ++SV+NA ITMYSK G I+ A++
Sbjct: 491 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 550
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F+L++ + + VSW +MI +QHG+G++A + F+ ML G KPD+I+YV VL+ C+H G
Sbjct: 551 LFDLLNGK-DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 609
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LV++G+ Y++MM VH I P HF+ MVDLLGRAG L EA + I+ MP++P WG+L
Sbjct: 610 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 669
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC++H N +L ++AA+ + ++ +SG+Y L +YS GK +D+A +RK M+ G+K
Sbjct: 670 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 729
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G+SW++++NKVHVF +D HPQ AI NKM ++ ++I +G+V E
Sbjct: 730 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR---------TES 780
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
+ ++ HHSEKLA+AFG++S P + IMKNLR+C DCH+ IK I + DRE V+RD
Sbjct: 781 PRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDG 838
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHFK G CSC DYW
Sbjct: 839 VRFHHFKSGSCSCGDYW 855
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 170/619 (27%), Positives = 282/619 (45%), Gaps = 107/619 (17%)
Query: 26 SRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD-EMPVKTLCSWN 83
SR G + +H R++ GL +VFL+N+L++ Y ++S A+++ ++ + + N
Sbjct: 32 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHN 91
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
+++ YAKQG L A E+F+ MP RD SW T++ D P
Sbjct: 92 IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLM--------------------SDTSRP 131
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
SC ALG ++ K G +V +L++M+ + G A +F
Sbjct: 132 A-----GSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 186
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+ + N +++ + +D A F+ M ERDVV+WN MIA SQ+G EALG
Sbjct: 187 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 246
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+ M + ++ D T S+L+ACA L L GKQ+HA +IR+ V +ALI Y
Sbjct: 247 LVVEMHR-KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELY 305
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G + A+R+F+SL+DR+ V+WT +
Sbjct: 306 AKCGSFK---------------------------------EAKRVFNSLQDRNSVSWTVL 332
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ G Q +VELF M E + + L+ ++S + L G+Q+H+ L+SG
Sbjct: 333 IGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH 392
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA------------- 490
++ VSN+LI++Y+K G++ A VF+ + R + VSWTSMI A +
Sbjct: 393 NRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMITAYSQIGNIIKAREFFD 451
Query: 491 ------------------QHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVE 531
QHG E+ ++++ ML + + PD +TYV + C G +
Sbjct: 452 GMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANK 511
Query: 532 QGQRYYNMMKNVHKIKP----TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G + H +K S + + + + G + EA + + DVV+W +
Sbjct: 512 LGDQIIG-----HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN-GKDVVSWNA 565
Query: 588 LLSACRVHKNLDLGKIAAE 606
+++ H +GK AA+
Sbjct: 566 MITGYSQH---GMGKQAAK 581
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 259/556 (46%), Gaps = 51/556 (9%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLK-----------NSLMNFYAKT 61
+E++ + + ++ S N + L + ++ L L V + S + A+
Sbjct: 214 IEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL 273
Query: 62 ESISYAK----KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
S+ + K KV +P + ++ YAK G A VFN + +R+SVSWT +I
Sbjct: 274 FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI 333
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ F ++ +F +M + + QF + ++++ C DL G+++HS +K+G +
Sbjct: 334 GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 393
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+ V+NSL+++YAK GD A+ VF M +++ SW +++ + G + AR FD M
Sbjct: 394 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 453
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
R+ +TWN+M+ Y Q+G + + L M++ ML + PD T + CA++ KLG
Sbjct: 454 ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLG 513
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
QI + ++ V NA I+ Y+K G + AQK
Sbjct: 514 DQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK----------------------- 550
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
+FD L +DVV+W AM+ GY Q+G+ K A + F M+ +G KP+ + A
Sbjct: 551 ----------LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVA 600
Query: 418 MLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+LS S + GK R G + L + ++ + +AG++ A+ + + + +
Sbjct: 601 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK 660
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
W +++ A HG E A + + EL PD +Y+ + + G + +
Sbjct: 661 PTAEVWGALLSACKIHGNDELAELAAKHVFELD-SPDSGSYMLLAKIYSDAGKSDDSAQV 719
Query: 537 YNMMKNVHKIKPTPSH 552
+M++ IK P +
Sbjct: 720 RKLMRD-KGIKKNPGY 734
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 244/509 (47%), Gaps = 43/509 (8%)
Query: 140 QVLPTQFT--VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++LP T + L SC + G L+ + +H +V GL+ V + N+LL+ Y G
Sbjct: 13 RLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALS 72
Query: 198 MAKAVFDG-MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A+ + ++ NV + N++++ + G L A FD+M RDV +WN++++ S
Sbjct: 73 DARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTS--- 129
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+P A + +C L +L Q+ + +F V
Sbjct: 130 ------------------RP-----AGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVE 166
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
AL+ + + G V+ A ++ Q I + ++L GY K+ I A F+ + +RD
Sbjct: 167 TALVDMFVRCGYVDFASRLFSQ--IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD 224
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+W M+ Q+G ++A+ L M R+G + ++ T ++ L+ + L SL GKQ+HA
Sbjct: 225 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 284
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+RS V++ALI +Y+K G+ A+RVFN + R +VSWT +I Q+
Sbjct: 285 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRN-SVSWTVLIGGSLQYECFS 343
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFAS 555
++++LF +M + D +++ C + + G++ +++ +K+ H S+ S
Sbjct: 344 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--S 401
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI--AAEKLLLIEP 613
++ L + G LQ A F+ + E D+V+W S+++A +G I A E +
Sbjct: 402 LISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYS-----QIGNIIKAREFFDGMAT 455
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSM 642
N+ ++A+ Y G ED + +M
Sbjct: 456 RNAITWNAMLGAYIQHGAEEDGLKMYSAM 484
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/716 (37%), Positives = 404/716 (56%), Gaps = 69/716 (9%)
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD P T+ N +L +Y + RLDLAC +F +P +DSV++ T+I Y + G + +I
Sbjct: 178 FDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+F++M Q P+ FT + VL + L D + G+++H+ V TG S +V N +L+ Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K R+ R FD+M E D V++N +I+
Sbjct: 296 SK-------------------------------HDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
YSQ +EA F ++ F A+ LS ANL L++G+Q+H + D
Sbjct: 325 SYSQAD-QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ VGN+L+ YAK E A+ IF
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAE---------------------------------LIFK 410
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
SL R V+WTA++ GY Q GL+ ++LF M + + T + +L S+S ASL
Sbjct: 411 SLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GKQ+HA +RSG ++ + L+ MY+K G+I A +VF + R VSW ++I A A
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN-AVSWNALISAHA 529
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
+G GE AI F +M+E G++PD ++ +GVLTAC+H G VEQG Y+ M ++ I P
Sbjct: 530 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 589
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+A M+DLLGR G EA ++ MP EPD + W S+L+ACR+HKN L + AAEKL
Sbjct: 590 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Query: 611 IEP-DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+E ++ AY ++ N+Y++ G+WE +++K+M+ G+KK +SWV++ +K+HVF D
Sbjct: 650 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP D I K+ ++ EI+ G+ PDT+SV+ DV+E +K + L++HSE+LA+AF LIS
Sbjct: 710 QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 769
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TPE + +MKNLR C DCH+AIK I K+V REI VRD +RFHHF +G+CSC DYW
Sbjct: 770 TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 185/696 (26%), Positives = 314/696 (45%), Gaps = 88/696 (12%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+ V ARIIK G N ++ + +S A+KV+DEMP K S NT++S + K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ--VLPTQFTVTS 150
G + A ++F+ MP+R V+WT ++ Y F A ++F +M + LP T T+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L C +A +VH+F VK G TN L +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFD-----TNPFLTVS-------------------- 187
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
NV++ + RLDLA F+++ E+D VT+N++I GY ++G E++ +F M +
Sbjct: 188 ----NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM-R 242
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S +P FT + L A L LG+Q+HA + T F VGN ++ Y+K
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK----- 297
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+++E R +FD + + D V++ ++ Y Q
Sbjct: 298 -HDRVLE---------------------------TRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ ++ FR M G N+ + MLS++++L+SL G+Q+H AL + S L V
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
N+L+ MY+K A +F + R TVSWT++I Q GL ++LF +M +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+ D T+ VL A + G++ + + ++ S + +VD+ + G +++A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAV 507
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSS 628
E MP + + V+W +L+SA + + + A K++ ++PD+ L S
Sbjct: 508 QVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC-SH 565
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
CG E ++M + + K H + D L R+ + + K+ D
Sbjct: 566 CGFVEQGTEYFQAMSPI---------YGITPKKKHYACMLDLL--GRNGRFAEAEKLMD- 613
Query: 689 IKEMGFVPDT---ASVLHDVEEDVKEQMLRHHSEKL 721
EM F PD +SVL+ + + +EKL
Sbjct: 614 --EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/523 (20%), Positives = 209/523 (39%), Gaps = 98/523 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA + G + N +++FY+K + + + +FDEMP S+N ++S+Y+
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ +++ ++ F EM F +
Sbjct: 328 -------------------------------QADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L+ L L G+++H + ++V NSL++MYAK A+ +F + +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
SW ++I+GY Q G L +F M +
Sbjct: 417 TVSW-------------------------------TALISGYVQKGLHGAGLKLFTKM-R 444
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S+L+ D+ T A+ L A A+ L LGKQ+HA+IIR+ G+ L+ YAK G ++
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A ++F+ + DR+ V+W A++ + N
Sbjct: 505 ---------------------------------DAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G + A+ F M+ G +P++ ++ +L+ S ++ G + A + G
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
++ + + G A ++ + + + + + W+S++ A H A + E++ +
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
D YV + G E+ + M+ IK P++
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE-RGIKKVPAY 693
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L+++ + +GK +HA II+ G +VF + L++ YAK SI A +VF+EMP
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIR 131
+ SWN ++SA+A G + A F M DSVS ++ + G +
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 132 MFVEM 136
F M
Sbjct: 575 YFQAM 579
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/701 (37%), Positives = 410/701 (58%), Gaps = 38/701 (5%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQF 146
A + LD AC+VF+ +P + +W T+I + + + +F++M+ + Q P +
Sbjct: 73 ALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSY 132
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T V+ + T + L AG+ +H V+K + ++NSL++ Y+ +GD
Sbjct: 133 TFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGD----------- 181
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
LD A F +++E+D+V+WNSMI+G+ Q G EAL +F
Sbjct: 182 --------------------LDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFK 221
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M K + +P++ T+ LSACA L+ G+ YI R D + NA++ Y K
Sbjct: 222 RM-KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKC 280
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +E A+++ ++ + +++++TT++DGY K+GD ARR+FD + D+ AW A++
Sbjct: 281 GSLEDARRLFDK--MEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISS 338
Query: 387 YEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Y+QNG K+A+ +FR + + + KPN TL++ L+ + L ++D G IH + G
Sbjct: 339 YQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKL 398
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ ++ +LI MYSK G++ A VF + R++ W++MI LA HG G AI LF +M
Sbjct: 399 NFHITTSLIDMYSKCGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMHGHGRAAIDLFSKM 457
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
E +KP+ +T+ +L AC+H GLV++G+ ++N M+ V+ + P H+A MVD+LGRAG
Sbjct: 458 QETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGC 517
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
L+EA IE MP+ P WG+LL ACR++ N++L ++A +LL + +N GAY L N+
Sbjct: 518 LEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNI 577
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y+ GKW+ + +R+ MK G++K G S +++ +H F V D HP IY+K+ +I
Sbjct: 578 YAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEI 637
Query: 686 WDEIKEMGFVPDTASVLHDVEED-VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
IK G+V D + +L VEE+ +KE L HSEKLAIA+GLI + +RI+KNLRV
Sbjct: 638 VARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRV 697
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCHS K I KL +R+I++RD RFHHF G CSC DYW
Sbjct: 698 CGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 217/505 (42%), Gaps = 98/505 (19%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
G+ +H ++K +F+ NSL++FY+
Sbjct: 148 LAGQAIHGMVMKASFGSDLFISNSLIHFYSSL---------------------------- 179
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G LD A VF+ + +D VSW ++I + + G + A+++F M + P + T+
Sbjct: 180 ---GDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMV 236
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL++C DL G+ ++ + G+ + ++N++L+MY K G A+ +FD M K
Sbjct: 237 GVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK 296
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ SW ++ + G D AR FD M D+ WN++I+ Y QNG EAL +F +
Sbjct: 297 DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQ 356
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + KP++ TLASTL+ACA L + LG IH YI + + +LI Y+K G +
Sbjct: 357 LNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHL 416
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E A +F S+ RDV W+AM+ G
Sbjct: 417 E---------------------------------KALEVFYSVERRDVFVWSAMIAGLAM 443
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G + A++LF M KPN T + +L S +D G+
Sbjct: 444 HGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLF--------------- 488
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N R V+ ++ + + M+ L + G EEA++L E+M
Sbjct: 489 -------------FNQMRPVYGVVPGSKH---YACMVDILGRAGCLEEAVELIEKM---P 529
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQ 534
I P + +L AC G VE +
Sbjct: 530 IVPSASVWGALLGACRIYGNVELAE 554
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 38/162 (23%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L A L +L G +H I K G+ L+ + SL++ Y+K
Sbjct: 363 PNEVTLASTLAACAQLGAMDL-------GGWIHVYIKKQGIKLNFHITTSLIDMYSKC-- 413
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
G L+ A EVF + RD W+ +I
Sbjct: 414 -----------------------------GHLEKALEVFYSVERRDVFVWSAMIAGLAMH 444
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
G + AI +F +M + +V P T T++L +C+ G + G+
Sbjct: 445 GHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGR 486
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 46/259 (17%)
Query: 426 ASLDHGKQIHASALRSG------EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
A+ H KQ+HA LR+G A+ L + AL S +++ A +VF+ I R
Sbjct: 41 ANKKHLKQLHAHMLRTGLFFDPPSATKLFTACAL----SSPSSLDYACKVFDQIP-RPNL 95
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIK-PDHITYVGVLTACTHGGLVEQGQRYYN 538
+W ++I A A + + +F +ML + P+ T+ V+ A T + GQ +
Sbjct: 96 YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHG 155
Query: 539 MMKNVH-----KIKPTPSHF-------------------------ASMVDLLGRAGLLQE 568
M+ I + HF SM+ + G +E
Sbjct: 156 MVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEE 215
Query: 569 AYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCN 624
A + M +E P+ V +LSAC +L+ G+ A + + D N +A+ +
Sbjct: 216 ALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLD 275
Query: 625 LYSSCGKWEDAANIRKSMK 643
+Y CG EDA + M+
Sbjct: 276 MYVKCGSLEDARRLFDKME 294
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/754 (36%), Positives = 429/754 (56%), Gaps = 67/754 (8%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++K GL VF++N L++FYA+
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAEC------------------------------ 179
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +D +VF M R+ VSWT++I Y R K A+ +F EMV+ + P+ T+ V
Sbjct: 180 -GHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCV 238
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++C L DL G++V +++ + GL + N+L++MY K G
Sbjct: 239 ISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCG----------------- 281
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+D A+ FD+ ++R++V +N++++ Y++ G EAL + ML+
Sbjct: 282 --------------AIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQ 327
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+PD+ T+ S +SA A L L GK H Y+IR + +GN +I Y K G E+
Sbjct: 328 GP-RPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEM 386
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A ++ + +S V+++ +L G+I+ GD+ A +F+ + +R+ V W M+ G Q
Sbjct: 387 ACRVFDL--MSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKS 444
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L +DA+ELFR M EG K + T+ + S L + + K +H ++G + ++
Sbjct: 445 LFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNT 504
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ M+++ G+ +A +VFN + R + +WT+ I +A G GE A LF +ML G+K
Sbjct: 505 ALVDMFARCGDPQSAMQVFNKMTER-DVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK 563
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD + +V VLTAC+HGG VEQG +++M++ H I P H+ MVDLLGRAGLL+EA++
Sbjct: 564 PDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFD 622
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I++MP+EP+ V WGSLL+ACRVHKN+++ AAE++ + P +G + L N+Y+S GK
Sbjct: 623 LIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGK 682
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W D A +R +++ GV+K G S VQ+ +H F D HP+ I + ++ +
Sbjct: 683 WTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSD 742
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G +PD ++VL DV+E KE +L HSEKLAIAFGLI+T + +R++KNLR+C+DCHS
Sbjct: 743 AGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSF 802
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + +REI+VRD RFH F++GLCSC DYW
Sbjct: 803 AKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 161/617 (26%), Positives = 259/617 (41%), Gaps = 128/617 (20%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNF---YAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
K +H +I K GL L+N A ES+ YA+K F+ +
Sbjct: 42 KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFE---------------LF 86
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ R D A + N ++I Y+ G + AI ++V M+ V P +T
Sbjct: 87 KEDVRSDDALFMLN-----------SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFP 135
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL+ CT + G +VH VVK GL V + N L++ YA+ G VF+GM +
Sbjct: 136 FVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER 195
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
NV SW S+I GY++ EA+ +F M+
Sbjct: 196 NVVSW-------------------------------TSLICGYARGDRPKEAVSLFFEMV 224
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++ ++P T+ +SACA L L +G+++ AYI + NAL+ Y K G +
Sbjct: 225 -EAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAI 283
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ A +R+FD DR++V + +L Y +
Sbjct: 284 DAA---------------------------------KRLFDECVDRNLVLYNTILSNYAR 310
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
GL ++A+ + M+++GP+P+ T+ + +S S+ L L +GK H +R+G S+
Sbjct: 311 QGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSI 370
Query: 450 SNALITMYSKAGNINAARRVFNL------IHWRQET------------------------ 479
N +I MY K G A RVF+L + W T
Sbjct: 371 GNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNA 430
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
V W +MI L Q L E+AI+LF M GIK D +T +G+ +AC + G E + +
Sbjct: 431 VFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTY 490
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
++ + I ++VD+ R G Q A M E DV AW + + + N +
Sbjct: 491 IEK-NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGE 548
Query: 600 LGKIAAEKLLL--IEPD 614
++L+ ++PD
Sbjct: 549 GATGLFNQMLIQGVKPD 565
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 222/484 (45%), Gaps = 65/484 (13%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
K R+ +G+ V A I + GL L+ + N+L++ Y K +I AK++FDE + L +NT
Sbjct: 244 KLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNT 303
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
ILS YA+QG LA + A+ + EM+Q P
Sbjct: 304 ILSNYARQG---LA----------------------------REALAILDEMLQQGPRPD 332
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ T+ S +++ L DL GK H +V++ GL G ++ N +++MY K G MA VFD
Sbjct: 333 RVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFD 392
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M K V SWN + + I +G ++ A F+Q+ ER+ V WN+MI+G Q +A+ +
Sbjct: 393 LMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIEL 452
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +K D+ T+ SAC L +L K +H YI
Sbjct: 453 FREM-QGEGIKADRVTMMGIASACGYLGAPELAKWVHTYI-------------------- 491
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
E++GI ++ T L+D + + GD A ++F+ + +RDV AWTA +
Sbjct: 492 ------------EKNGIP-CDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAI 538
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G + A LF M+ +G KP+ +L+ S ++ G I + G +
Sbjct: 539 GTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGIS 598
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ ++ + +AG + A + + V W S++ A H E A ER
Sbjct: 599 PQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAER 658
Query: 505 MLEL 508
+ EL
Sbjct: 659 INEL 662
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 145/277 (52%), Gaps = 12/277 (4%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +++S + A L+ + F GK+ H +I+ GL + N +++ Y K
Sbjct: 331 PDRVTMLSAISASAQLV-------DLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGK 383
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
A +VFD M KT+ SWN++ + + + G ++ A EVFN +P R++V W T+I +
Sbjct: 384 PEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQK 443
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F++AI +F EM + + + T+ + ++C LG K VH+++ K G+ + +
Sbjct: 444 SLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLN 503
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IE 239
+L++M+A+ GD A VF+ M ++VS+W + G + A F+QM ++
Sbjct: 504 TALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK 563
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
DVV + ++ S G + L +F+ +++D + P
Sbjct: 564 PDVVLFVQVLTACSHGGQVEQGLHIFS-LMEDHGISP 599
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 148/330 (44%), Gaps = 41/330 (12%)
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
A +K++ L +L C L +LK Q+H I + D L++
Sbjct: 13 ATQIKEADPMTKDSCLNESLRCCKTLNQLK---QLHCQITKNGLDQIPSTLTKLVN---- 65
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR-----DRDVVAW 380
G EIA + Y AR+ F+ + D +
Sbjct: 66 -AGAEIASP----ESLDY---------------------ARKAFELFKEDVRSDDALFML 99
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+++ GY GL ++A+ L+ M+ G PN+YT +LS + +A+ G Q+H S ++
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + + N LI Y++ G+++ +VF + R VSWTS+I A+ +EA+
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERN-VVSWTSLICGYARGDRPKEAVS 218
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF M+E GI+P +T V V++AC ++ G+R + + +K ++VD+
Sbjct: 219 LFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGEL-GLKLNKVMVNALVDMY 277
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+ G + A + ++ ++V + ++LS
Sbjct: 278 MKCGAIDAAKRLFDEC-VDRNLVLYNTILS 306
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/737 (36%), Positives = 437/737 (59%), Gaps = 47/737 (6%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
++ +L++ + + + +A ++F ++ T+ N++L+ YAK +D A E F M RD
Sbjct: 175 VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD 234
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
VSW +I ++ GR + A+ + VEM + V T TS L +C L L GK++H+
Sbjct: 235 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 294
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
V+++ V ++L+ +YAK G AK VF+ ++ +N SW V
Sbjct: 295 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV------------- 341
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
+I G Q +++ +F N ++ + D+F LA+ +S C
Sbjct: 342 ------------------LIGGSLQYECFSKSVELF-NQMRAELMAIDQFALATLISGCF 382
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
N L LG+Q+H+ +++ + V N+LIS YAK G ++ A+ + S +S +++++
Sbjct: 383 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF--SSMSERDIVSW 440
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV-REGP 408
T+++ Y +IG+I AR FD + R+ + W AML Y Q+G +D ++++ +M+ ++
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
P+ T + + + + G QI +++G ++SV+NA ITMYSK G I+ A++
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F+L++ + + VSW +MI +QHG+G++A + F+ ML G KPD+I+YV VL+ C+H G
Sbjct: 561 LFDLLNGK-DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LV++G+ Y++MM VH I P HF+ MVDLLGRAG L EA + I+ MP++P WG+L
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC++H N +L ++AA+ + ++ +SG+Y L +YS GK +D+A +RK M+ G+K
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G+SW++++NKVHVF +D HPQ AI NKM ++ ++I +G+V E
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVR---------TES 790
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
+ ++ HHSEKLA+AFG++S P + IMKNLR+C DCH+ IK I + DRE V+RD
Sbjct: 791 PRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDG 848
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHFK G CSC DYW
Sbjct: 849 VRFHHFKSGSCSCGDYW 865
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 179/620 (28%), Positives = 296/620 (47%), Gaps = 83/620 (13%)
Query: 26 SRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD-EMPVKTLCSWN 83
SR G + +H R++ GL +VFL+N+L++ Y ++S A+++ ++ + + N
Sbjct: 16 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHN 75
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVL 142
+++ YAKQG L A E+F+ MP RD SW T++ Y + RF + + FV M + L
Sbjct: 76 IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSL 135
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT V+ SC ALG ++ K G +V +L++M+ + G A +
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F + + N +++ + +D A F+ M ERDVV+WN MIA SQ+G EAL
Sbjct: 196 FSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL 255
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G+ M + ++ D T S+L+ACA L L GKQ+HA +IR+ V +ALI
Sbjct: 256 GLVVEMHR-KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+R+F+SL+DR+ V+WT
Sbjct: 315 YAKCGSFK---------------------------------EAKRVFNSLQDRNSVSWTV 341
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G Q +VELF M E + + L+ ++S + L G+Q+H+ L+SG
Sbjct: 342 LIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG 401
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA------------ 490
++ VSN+LI++Y+K G++ A VF+ + R + VSWTSMI A +
Sbjct: 402 HNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMITAYSQIGNIIKAREFF 460
Query: 491 -------------------QHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLV 530
QHG E+ ++++ ML + + PD +TYV + C G
Sbjct: 461 DGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGAN 520
Query: 531 EQGQRYYNMMKNVHKIKP----TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G + H +K S + + + + G + EA + + DVV+W
Sbjct: 521 KLGDQIIG-----HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN-GKDVVSWN 574
Query: 587 SLLSACRVHKNLDLGKIAAE 606
++++ H +GK AA+
Sbjct: 575 AMITGYSQH---GMGKQAAK 591
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 243/515 (47%), Gaps = 40/515 (7%)
Query: 43 GLHLSVFLKNSLMNFYAKTESISYAK----KVFDEMPVKTLCSWNTILSAYAKQGRLDLA 98
G+ L S + A+ S+ + K KV +P + ++ YAK G A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
VFN + +R+SVSWT +I + F ++ +F +M + + QF + ++++ C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
DL G+++HS +K+G + + V+NSL+++YAK GD A+ VF M +++ SW ++
Sbjct: 385 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 444
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
+ + G + AR FD M R+ +TWN+M+ Y Q+G + + L M++ ML + PD
Sbjct: 445 TAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 504
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
T + CA++ KLG QI + ++ V NA I+ Y+K G + AQK
Sbjct: 505 VTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK---- 560
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+FD L +DVV+W AM+ GY Q+G+ K A +
Sbjct: 561 -----------------------------LFDLLNGKDVVSWNAMITGYSQHGMGKQAAK 591
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMY 457
F M+ +G KP+ + A+LS S + GK R G + L + ++ +
Sbjct: 592 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLL 651
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
+AG++ A+ + + + + W +++ A HG E A + + EL PD +Y
Sbjct: 652 GRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELD-SPDSGSY 710
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
+ + + G + + +M++ IK P +
Sbjct: 711 MLLAKIYSDAGKSDDSAQVRKLMRD-KGIKKNPGY 744
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 248/500 (49%), Gaps = 15/500 (3%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG- 205
+ L SC + G L+ + +H +V GL+ V + N+LL+ Y G A+ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
++ NV + N++++ + G L A FD+M RDV +WN++++GY Q + L F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+M + P+ FT + +C L +L Q+ + +F V AL+ + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G V+ A ++ Q I + ++L GY K+ I A F+ + +RDVV+W M+
Sbjct: 186 CGYVDFASRLFSQ--IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIA 243
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Q+G ++A+ L M R+G + ++ T ++ L+ + L SL GKQ+HA +RS
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQI 303
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
V++ALI +Y+K G+ A+RVFN + R +VSWT +I Q+ ++++LF +M
Sbjct: 304 DPYVASALIELYAKCGSFKEAKRVFNSLQDRN-SVSWTVLIGGSLQYECFSKSVELFNQM 362
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAG 564
+ D +++ C + + G++ +++ +K+ H S+ S++ L + G
Sbjct: 363 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLISLYAKCG 420
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI--AAEKLLLIEPDNSGAYSAL 622
LQ A F+ + E D+V+W S+++A +G I A E + N+ ++A+
Sbjct: 421 DLQNA-EFVFSSMSERDIVSWTSMITAYS-----QIGNIIKAREFFDGMATRNAITWNAM 474
Query: 623 CNLYSSCGKWEDAANIRKSM 642
Y G ED + +M
Sbjct: 475 LGAYIQHGAEEDGLKMYSAM 494
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 33/283 (11%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A L+ + +G+ +H+ +K G + ++ + NSL++ YAK + A+ VF M
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ + SW ++++AY++ G + A E F+ M R++++W ++ Y + G ++ ++M+ M
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAM 494
Query: 137 V-QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ Q V P T ++ C +G G ++ VK GL V+V N+ + MY+K G
Sbjct: 495 LSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGR 554
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD + K+V SWN +MI GYSQ+
Sbjct: 555 ISEAQKLFDLLNGKDVVSWN-------------------------------AMITGYSQH 583
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
G +A F +ML + KPD + + LS C++ ++ GK
Sbjct: 584 GMGKQAAKTFDDMLSKGA-KPDYISYVAVLSGCSHSGLVQEGK 625
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/754 (36%), Positives = 426/754 (56%), Gaps = 66/754 (8%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++K GL +F+ NSL++FYA+
Sbjct: 149 GVQVHGAVLKMGLEGDIFVSNSLIHFYAEC------------------------------ 178
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G++DL ++F+ M R+ VSWT++I Y+ K A+ +F +M + V P T+ V
Sbjct: 179 -GKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCV 237
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++C L DL GKKV S++ + G+ + N+L++MY K GD
Sbjct: 238 ISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGD---------------- 281
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+ AR FD+ +++V +N++++ Y + + + L + ML+
Sbjct: 282 ---------------ICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQK 326
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+PDK T+ ST++ACA L L +GK HAY++R + + NA+I Y K G E
Sbjct: 327 GP-RPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREA 385
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A K+ E + V+ + +L+ G ++ GD+ A RIFD + +RD+V+W M+ Q
Sbjct: 386 ACKVFEH--MPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVS 443
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ ++A+ELFR M +G + T+ + S L +LD K + ++ L +
Sbjct: 444 MFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGT 503
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ M+S+ G+ ++A VF + +++ +WT+ I +A G E AI+LF MLE +K
Sbjct: 504 ALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVK 562
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD + +V +LTAC+HGG V+QG++ + M+ H I+P H+ MVDLLGRAGLL+EA +
Sbjct: 563 PDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVD 622
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I++MP+EP+ V WGSLL+ACR HKN++L AAEKL + P+ G + L N+Y+S GK
Sbjct: 623 LIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGK 682
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W D A +R MK GV+K G S +++Q +H F D H + I + +I + E
Sbjct: 683 WTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSE 742
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+VPDT +VL DV+E KE +L HSEKLA+A+GLI+T + +R++KNLR+C+DCHS
Sbjct: 743 AGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSF 802
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + KL +REI VRD R+H FK+G CSCRDYW
Sbjct: 803 AKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 232/521 (44%), Gaps = 106/521 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP +++ + A L ++ +GK V + I + G+ LS + N+L++ Y K
Sbjct: 229 PNPVTMVCVISACAKL-------KDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGD 281
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A+++FDE K L +NTI+S Y W +
Sbjct: 282 ICAARQIFDECANKNLVMYNTIMSNYVHH-------------------EWAS-------- 314
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
+ + + EM+Q P + T+ S +A+C LGDLS GK H++V++ GL G N++
Sbjct: 315 ----DVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS 370
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N++++MY K G A VF+ M K V +WN +++ + G ++LA FD+M+ERD+V
Sbjct: 371 NAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLV 430
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+WN+MI Q EA+ +F M ++ + D+ T+ SAC L L L K + Y
Sbjct: 431 SWNTMIGALVQVSMFEEAIELFREM-QNQGIPGDRVTMVGIASACGYLGALDLAKWVCTY 489
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I + + +G AL+ D + + GD
Sbjct: 490 IEKNDIHVDLQLGTALV---------------------------------DMFSRCGDPS 516
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A +F + RDV AWTA + G + A+ELF M+ + KP++ A+L+ S
Sbjct: 517 SAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACS 576
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
S+D G+Q+ S KA I R V +
Sbjct: 577 HGGSVDQGRQLFWS-------------------MEKAHGI------------RPHIVHYG 605
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
M+ L + GL EEA+ L + M I+P+ + + +L AC
Sbjct: 606 CMVDLLGRAGLLEEAVDLIQSM---PIEPNDVVWGSLLAAC 643
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 43/301 (14%)
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
+ ++ GY GL A+ L+ M+ G P+ YT +LS S + +L G Q+H + L
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+ G + VSN+LI Y++ G ++ R++F+ + R VSWTS+I + L +EA+
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERN-VVSWTSLINGYSGRDLSKEAV 216
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF +M E G++P+ +T V V++AC +E G++ + + + ++ + ++VD+
Sbjct: 217 SLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISEL-GMELSTIMVNALVDM 275
Query: 560 LGRAGLLQEA--------------YNFI---------------------ENMPLEPDVVA 584
+ G + A YN I + P PD V
Sbjct: 276 YMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGP-RPDKVT 334
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLL---LIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
S ++AC +L +GK + +L L DN +A+ ++Y CGK E A + +
Sbjct: 335 MLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS--NAIIDMYMKCGKREAACKVFEH 392
Query: 642 M 642
M
Sbjct: 393 M 393
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 62/322 (19%)
Query: 427 SLDHGKQIHASALRSG-----EASSLSVSNALITMYSKAGNINA---ARRVFNLIHWRQE 478
+L KQ+H ++ G AS+L N LI + G + + AR F
Sbjct: 37 TLKELKQLHCDMMKKGLLCHKPASNL---NKLIASSVQIGTLESLDYARNAFGDDDGNMA 93
Query: 479 TV-SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------H 526
++ + +I A GLG++AI L+ +ML +GI PD T+ +L+AC+ H
Sbjct: 94 SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVH 153
Query: 527 GGLVEQGQRYYNMMKN--VH------KIKPTPSHFASMVD---------LLGRAG--LLQ 567
G +++ G + N +H K+ F M++ + G +G L +
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSK 213
Query: 568 EAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG-AYSALC 623
EA + M +EP+ V ++SAC K+L+LGK + + + S +AL
Sbjct: 214 EAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALV 273
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
++Y CG D R+ K ++ + + N VH +W + +
Sbjct: 274 DMYMKCG---DICAARQIFDECANKNLVMYNTI-MSNYVH----HEW--------ASDVL 317
Query: 684 KIWDEIKEMGFVPDTASVLHDV 705
I DE+ + G PD ++L +
Sbjct: 318 VILDEMLQKGPRPDKVTMLSTI 339
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/755 (36%), Positives = 411/755 (54%), Gaps = 98/755 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H ++K G L +F L N YAK + A+KVFD
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDR----------------- 195
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
MP RD VSW TI+ Y++ G + A+ M M ++ + P+ T+ S
Sbjct: 196 --------------MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVS 241
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + +AL + GK++H + ++ G VN+ +L++MYAK G
Sbjct: 242 VLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGS--------------- 286
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
L AR FD M+ER+VV+WNSMI Y QN EA+ +F ML
Sbjct: 287 ----------------LKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKML- 329
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D +KP ++ L ACA+L L+ G+ IH + E D V N+LIS Y K
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCK--- 386
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
++ A +F L+ R +V+W AM++G+ QN
Sbjct: 387 ------------------------------EVDTAASMFGKLQSRTIVSWNAMILGFAQN 416
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G +A+ F M KP+ +T ++++ + L+ H K IH +R+ ++ V+
Sbjct: 417 GRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVT 476
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
AL+ MY+K G I AR +F+++ R T +W +MI HG+G+ A++LFE M + I
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVT-TWNAMIDGYGTHGIGKAALELFEEMQKGTI 535
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+P+ +T++ V++AC+H GLVE G + ++MMK + I+P+ H+ +MVDLLGRAG L EA+
Sbjct: 536 RPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAW 595
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+FI MP++P V +G++L AC++HKN++ + AE+L + P++ G + L N+Y +
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAAS 655
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
WE +R SM G++KT G S V+I+N+VH F HP IY + K+ +IK
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIK 715
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+VPDT +L +E+DVKEQ+L HSEKLAI+FGL++T TT+ + KNLRVC DCH+
Sbjct: 716 EAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 774
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K+I + REI+VRD RFHHFK G CSC DYW
Sbjct: 775 ATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 245/523 (46%), Gaps = 73/523 (13%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S + + G +D A VF + + +V + T++ + ++ A++ FV M D+V P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ T +L C +L GK++H +VK+G S + L NMYAK A+ VFD
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +++ SWN +V AGYSQNG AL M
Sbjct: 195 RMPERDLVSWNTIV-------------------------------AGYSQNGMARMALEM 223
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
N++ + +LKP T+ S L A + L +++GK+IH Y +R FD+ + AL+ YA
Sbjct: 224 -VNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYA 282
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G ++ A+ L DG ++ R+VV+W +M+
Sbjct: 283 KCGSLKTAR-----------------LLFDGMLE----------------RNVVSWNSMI 309
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y QN K+A+ +F+ M+ EG KP + ++ L + L L+ G+ IH ++
Sbjct: 310 DAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELD 369
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
++SV N+LI+MY K ++ A +F + R VSW +MI+ AQ+G EA+ F +
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT-IVSWNAMILGFAQNGRPIEALNYFSQ 428
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRA 563
M +KPD TYV V+TA + + + +M+N + ++VD+ +
Sbjct: 429 MQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNC--LDKNVFVTTALVDMYAKC 486
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
G + A I +M E V W +++ H +GK A E
Sbjct: 487 GAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH---GIGKAALE 525
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 9/277 (3%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T L+ + + G + A R+F+ + + V + ML G+ + A++ F M + +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P Y + +L V A L GK+IH ++SG + L L MY+K ++ AR+V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ + R + VSW +++ +Q+G+ A+++ M E +KP IT V VL A + L
Sbjct: 193 FDRMPER-DLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRL 251
Query: 530 VEQGQRY--YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
+ G+ Y M + + ++VD+ + G L+ A + M LE +VV+W S
Sbjct: 252 IRIGKEIHGYAMRAGFDSLVNIAT---ALVDMYAKCGSLKTARLLFDGM-LERNVVSWNS 307
Query: 588 LLSACRVHKNLDLGKIAAEKLL--LIEPDNSGAYSAL 622
++ A ++N + +K+L ++P + AL
Sbjct: 308 MIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/694 (38%), Positives = 415/694 (59%), Gaps = 37/694 (5%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-VTNS 185
K+ +R V+++ + T T ++ C +++ K++ S + + + N
Sbjct: 4 KSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQ 63
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
LL++YAK G A+ +FD M ++ SWN ++S + SG + +A FD+M RD V++
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N+ IAG+S N E+L +F M ++ +P ++T+ S L+A A L L+ GKQIH II
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREG-FEPTEYTIVSILNASAQLLDLRYGKQIHGSII 182
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVE-----------------------QSGIS 342
F + NAL YAK G +E A+ + + + I
Sbjct: 183 VRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIG 242
Query: 343 YL----------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
L + + +T++ Y + G + ARR+F +++D+V WTAM+VGY +NG
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGR 302
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+DA+ LF M+ E +P++YTLS+++S + LASL HG+ +H ++ +G ++L VS+A
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSA 362
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MYSK G I+ AR VFNL+ R VSW +MIV AQ+G ++A++LFE ML+ KP
Sbjct: 363 LIDMYSKCGFIDDARSVFNLMPTRN-VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKP 421
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D++T++G+L+AC H +EQGQ Y++ + N H + PT H+A MV+LLGR G +++A
Sbjct: 422 DNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVAL 481
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I+NM +PD + W +LLS C ++ ++AA L ++P + Y L N+Y+S G+W
Sbjct: 482 IKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRW 541
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+D A++R MK VKK GFSW++I N+VH F ED HP+ + IY K+ + +++E
Sbjct: 542 KDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEE 601
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT-LRIMKNLRVCNDCHSA 751
GF P+T VLHDV ED K + + HSEKLA+AFGLI P + +RI+KN+R+CNDCH
Sbjct: 602 GFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEF 661
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KF +++ R+I++RD+ RFHHF G CSC D W
Sbjct: 662 MKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 238/481 (49%), Gaps = 70/481 (14%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
FL N L++ YAK + A+ +FD+M + SWN +LSAYAK G + F+ MP R
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
DSVS+ T I ++ + ++ +F M ++ PT++T+ S+L + L DL GK++H
Sbjct: 119 DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIH 178
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS--------- 219
++ G V + N+L +MYAK G+ A+ +FD + KN+ SWN+++S
Sbjct: 179 GSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPE 238
Query: 220 -----LH---------------------IHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
LH GR+D AR F + E+D+V W +M+ GY+
Sbjct: 239 KCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYA 298
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+NG + +AL +F ML + ++PD +TL+S +S+CA L L G+ +H I +
Sbjct: 299 KNGREEDALLLFNEMLLE-HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V +ALI Y+K G ++ AR +F+ +
Sbjct: 358 LVSSALIDMYSKCGFID---------------------------------DARSVFNLMP 384
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
R+VV+W AM+VG QNG +KDA+ELF +M+++ KP+N T +LS ++ G++
Sbjct: 385 TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQE 444
Query: 434 IHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
S + + G +L ++ + + G I A + + + + W++++ +
Sbjct: 445 YFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTK 504
Query: 493 G 493
G
Sbjct: 505 G 505
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 158/331 (47%), Gaps = 74/331 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +++S L A LL +L+ GK +H II +VF+ N+L + YAK
Sbjct: 153 PTEYTIVSILNASAQLL--DLR-----YGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGE 205
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQ------------------------------- 92
I A+ +FD + K L SWN ++S YAK
Sbjct: 206 IEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA 265
Query: 93 ----GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
GR+D A VF+ +D V WT ++V Y + GR ++A+ +F EM+ + + P +T+
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+SV++SC L L G+ VH + GL+ + V+++L++MY+K G A++VF+ M
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+NV SW N+MI G +QNG+D +AL +F NM
Sbjct: 386 RNVVSW-------------------------------NAMIVGCAQNGHDKDALELFENM 414
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
L+ KPD T LSAC + ++ G++
Sbjct: 415 LQ-QKFKPDNVTFIGILSACLHCNWIEQGQE 444
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 288/759 (37%), Positives = 423/759 (55%), Gaps = 76/759 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
HA+++K GLH + + + L+ + + + YA VF+ L WNT+L A
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
L + + M+V MV +P +T +
Sbjct: 61 SSDL-------------------------------VSPLEMYVRMVSXGHVPNAYTFPFL 89
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L SC G+++H+ V+K G SL++MYA+ G A+ VFD ++V
Sbjct: 90 LKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDV 149
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN-GYDFEALGMFANMLK 270
S +++ + G + AR FD + ERDVV+WN+MI GY +N GY+ EAL +F M++
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYE-EALELFKEMMR 208
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYAKVGGV 329
++++PD+ TL S LSACA ++LG++IH + F ++ + NA I Y+K G V
Sbjct: 209 -TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV 267
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
EI A +F+ L +DVV+W ++ GY
Sbjct: 268 EI---------------------------------ASGLFEGLSCKDVVSWNTLIGGYTH 294
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH + G +
Sbjct: 295 MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGS 354
Query: 448 SVSNALITMYSKAGNINAARRVFN-LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
++ +LI MY+K G+I AA +VFN ++H + SW +MI A HG A LF RM
Sbjct: 355 ALRTSLIDMYAKCGDIEAAHQVFNSMMH--KSLSSWNAMIFGFAMHGRANAAFDLFSRMR 412
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ GI+PD IT VG+L+AC+H GL++ G+ + + + I P H+ M+DLLG AGL
Sbjct: 413 KNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLF 472
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA I MP+EPD V W SLL AC++H NL+L + A+KL+ IEP+NSG+Y L N+Y
Sbjct: 473 KEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIY 532
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G+WED A IR+ + G+KK G S ++I + VH F + D LHPQ IY + ++
Sbjct: 533 ATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMD 592
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
++E GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L ++KNLRVC
Sbjct: 593 VLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCR 652
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+CH A K I K+ REIV RD TRFHHF+ G+CSC DYW
Sbjct: 653 NCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 241/524 (45%), Gaps = 86/524 (16%)
Query: 9 LISPLEFYAH---------------LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNS 53
L+SPLE Y LL+S KS+ G+ +HA+++K G L + S
Sbjct: 64 LVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTS 123
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
L++ YA+ + A+KVFD + + S +++ YA +G + A +VF+ + RD VSW
Sbjct: 124 LISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSW 183
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+I Y E ++ A+ +F EM++ V P + T+ SVL++C G + G+++H+ V
Sbjct: 184 NAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDD 243
Query: 174 -TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
G + + N+ + +Y+K GD +A +F+G+ K+V SW
Sbjct: 244 HHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSW------------------ 285
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
N++I GY+ EAL +F ML+ S P+ T+ S L ACA+L
Sbjct: 286 -------------NTLIGGYTHMNLYKEALLLFQEMLR-SGESPNDVTMLSVLPACAHLG 331
Query: 293 KLKLGKQIHAYIIRTEFDAT--GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+ +G+ IH YI + T + +LI YAK
Sbjct: 332 AIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKC------------------------ 367
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
GDI A ++F+S+ + + +W AM+ G+ +G A +LF M + G +P
Sbjct: 368 ---------GDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEP 418
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRV 469
++ TL +LS S LD G+ I S + + L +I + AG A +
Sbjct: 419 DDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEI 478
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+++ + V W S++ A HG E A ++++E I+P+
Sbjct: 479 IHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLME--IEPE 520
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 290/782 (37%), Positives = 444/782 (56%), Gaps = 74/782 (9%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
S L + L++ + R+ GK +HA IK + S +L N + Y+K +S A++V
Sbjct: 6 SLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRV 65
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD + S+NT++SAYAK+ +++A ++F+ MP DSVS+ T+I Y G + A
Sbjct: 66 FDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAF 125
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++F+EM + + FT++ ++ +C ++ +++H+ V TGL V+V N+L+ Y
Sbjct: 126 QLFLEMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSY 183
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE-RDVVTWNSMI 249
+K +G L AR F + E RD V+WNSM+
Sbjct: 184 SK-------------------------------NGFLKEARRIFHWLSEDRDEVSWNSMV 212
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
Y Q+ +AL ++ M L D FTLAS L+A N++ L G Q HA +I++ +
Sbjct: 213 VAYMQHREGSKALELYLEMTV-RGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGY 271
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
VG+ LI Y+K GG +LD R++F
Sbjct: 272 HQNSHVGSGLIDLYSKCGGC----------------------MLD----------CRKVF 299
Query: 370 DSLRDRDVVAWTAMLVGYE-QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
D + + D+V W M+ GY L+ +A+E FR + G +P++ +L ++S S+++S
Sbjct: 300 DEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSP 359
Query: 429 DHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G+Q+H AL+ S+ +SV+NALI MYSK GN+ A+ +F+ + TVS+ SMI
Sbjct: 360 SQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIA 418
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQHG+G +++ LF+RMLE+ P +IT++ VL AC H G VE G+ Y+NMMK I+
Sbjct: 419 GYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIE 478
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P HF+ M+DLLGRAG L EA IE +P +P W +LL ACR+H N++L AA +
Sbjct: 479 PEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANR 538
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL ++P N+ Y L N+YS G+ +DAA++RK M+ GVKK G SW+++ ++H+F
Sbjct: 539 LLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVA 598
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPD--TASVLHDVEEDVKEQMLR--HHSEKLAI 723
ED HP I + ++ +IK++G+ P+ +ASV D +E+ LR HHSEKLA+
Sbjct: 599 EDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAV 658
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+FGL+ST E + + KNLR+C DCH+AIK+I ++V REI VRD+ RFH FK G CSC
Sbjct: 659 SFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGG 718
Query: 784 YW 785
YW
Sbjct: 719 YW 720
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/693 (37%), Positives = 397/693 (57%), Gaps = 40/693 (5%)
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QVLPTQFTVTSVLASC 155
A VF+ P R +WT+II GR + +R F EM+ + P F + VL C
Sbjct: 77 AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCC 136
Query: 156 TALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWN 215
LGD+ +G+++H +++++G+ V + N++L+MYAK GD A+ F M K+ +SWN
Sbjct: 137 AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWN 196
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
+V+ + G L A FD+ RDV +WN++++G ++G+ EALG M++ + +
Sbjct: 197 IVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVR-AGVT 255
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
+T + + L LG+Q+H ++ + +A + C
Sbjct: 256 FSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEE-----DAFVGC------------- 297
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD---RDVVAWTAMLVGYEQNGL 392
+L+D Y K G++ A IFD D AW+ M+ GY QNG
Sbjct: 298 ---------------SLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGR 342
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
++A+E FR M+REG + L+++ S ++ ++ G+Q+H + G +++A
Sbjct: 343 EEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASA 402
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
++ MYSK+G++ A R+F + + WT+M+ + A HG G A+++F RM I P
Sbjct: 403 IVDMYSKSGSLEDACRIFRSAQTKNVAL-WTTMLCSYASHGQGRMALEIFSRMKAEKIMP 461
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+ IT V VL+AC+H GLV G Y+N+M+ + I P H+ MVDL GRAGLL +A NF
Sbjct: 462 NEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNF 521
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
IE + + V W +LLSACR+HK+++ ++A+EKL+ +E ++G+Y + N+Y++ KW
Sbjct: 522 IEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKW 581
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
D +R SMK V+K G SW+ ++N VH F D HP+ IY + K+ + +KEM
Sbjct: 582 LDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEM 641
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+ T V+HD+EE+ +E L+ HSEKLAIAFG+ISTP T LRI KNLRVC DCH AI
Sbjct: 642 GYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAI 701
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KFI + DREIVVRD RFHHFK G CSC D+W
Sbjct: 702 KFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 205/478 (42%), Gaps = 63/478 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H I++ G+ V L N++++ YAK A++ F M K SWN ++ A +
Sbjct: 145 GRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQ 204
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L A ++F+ RD SW TI+ G A+ +MV+ V + +T + V
Sbjct: 205 DGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMV 264
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
A L G+++H VV L V SL++MY K G+ A ++FD
Sbjct: 265 FALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFD------- 317
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
++ E W++M+AGY QNG + EAL F ML++
Sbjct: 318 ---------------------RWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLRE 356
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ +F L S SACAN ++ G+Q+H ++ + P+ +A++ Y+K G +E
Sbjct: 357 -GVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLE- 414
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A RIF S + ++V WT ML Y +G
Sbjct: 415 --------------------------------DACRIFRSAQTKNVALWTTMLCSYASHG 442
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVS 450
+ A+E+F M E PN TL A+LS S + G + G +
Sbjct: 443 QGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHY 502
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
N ++ +Y +AG ++ A+ E V W +++ A H E A E++++L
Sbjct: 503 NCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQL 560
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ I+ Y+K G L+ AC +F ++ WTT++ +Y G+ + A+ +F M ++++
Sbjct: 401 SAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIM 460
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT---NSLLNMYAKVGDEMMA 199
P + T+ +VL++C+ G +S G H F + G V T N ++++Y + G A
Sbjct: 461 PNEITLVAVLSACSHSGLVSDG--YHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKA 518
Query: 200 KAVFDGMRLKNVS-SWNVVVS---LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
K + ++ + + W ++S LH H LA + Q+ + D ++ M Y+ N
Sbjct: 519 KNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATN 578
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/780 (34%), Positives = 436/780 (55%), Gaps = 54/780 (6%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
E Y+ L++ + + ++G +H +IK G L V+L+ +LMNFY + + A +VF E
Sbjct: 675 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE 734
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
MPN +++ W I+ + + + + +F
Sbjct: 735 -------------------------------MPNPEALLWNEAIILNLQSEKLQKGVELF 763
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+M + T+ VL +C +G L+A K++H +V + GL V++ N L++MY+K
Sbjct: 764 RKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKN 823
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMI 249
G +A+ VFD M +N SSWN ++S + G L+ A + F ++ ++ D+VTWN ++
Sbjct: 824 GKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 883
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
+G+ +GY E L + M + KP+ ++ S L A + L L +GK+ H Y++R F
Sbjct: 884 SGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGF 942
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
D VG +LI Y K + AQ + + + N+ A+ +L+ GY G A R+
Sbjct: 943 DCDVYVGTSLIDMYVKNHSLXSAQAVFDN--MKNRNIFAWNSLVSGYSFKGMFEDALRLL 1000
Query: 370 DSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
+ + D+V W M+ GY G + A PN+ +++ +L +SL
Sbjct: 1001 NQMEKEGIKPDLVTWNGMISGYAMWGCARKAF-----------MPNSASITCLLRACASL 1049
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
+ L GK+IH ++R+G + V+ ALI MYSK+ ++ A +VF I + SW M
Sbjct: 1050 SLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ-NKTLASWNCM 1108
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I+ A GLG+EAI +F M ++G+ PD IT+ +L+AC + GL+ +G +Y++ M ++
Sbjct: 1109 IMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYR 1168
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I P H+ MVDLLGRAG L EA++ I MPL+PD WG+LL +CR+HKNL + AA
Sbjct: 1169 IVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAA 1228
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
+ L +EP+NS Y + NLYS +WED ++R+ M GV+ Q +SW+QI +VHVF
Sbjct: 1229 KNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVF 1288
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
++ HP IY ++ ++ E+K++G+VPD V +++E K+++L H+EKLAI +
Sbjct: 1289 SSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITY 1348
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GLI +R++KN R+C+DCHSA K+I + RE+ +RD RFHHF++G CSC D+W
Sbjct: 1349 GLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 137/586 (23%), Positives = 252/586 (43%), Gaps = 103/586 (17%)
Query: 76 VKTLCSWN------TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY-NEIGRFKN 128
+K WN ++S+Y G A VF + R+ + W + + + + G
Sbjct: 598 IKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHI 657
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+ +F E+ V+ + L +CT + D+ G ++H ++K G V + +L+N
Sbjct: 658 VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMN 717
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y + A VF M WN + L++ S +L F +M
Sbjct: 718 FYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM----------- 766
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
+ S LK + T+ L AC + L KQIH Y+ R
Sbjct: 767 ---------------------QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFG 805
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
D+ + N LIS Y+K G +E+A+++ + + N ++ +++ Y +G + A +
Sbjct: 806 LDSDVSLCNPLISMYSKNGKLELARRVFD--SMENRNTSSWNSMISSYAALGFLNDAWSL 863
Query: 369 FDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
F L D+V W +L G+ +G ++ + + + M EG KPN+ +++++L S
Sbjct: 864 FYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISE 923
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L L+ GK+ H LR+G + V +LI MY K ++ +A+ VF+ + R +W S
Sbjct: 924 LGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRN-IFAWNS 982
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG------------------------V 520
++ + G+ E+A++L +M + GIKPD +T+ G +
Sbjct: 983 LVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCL 1042
Query: 521 LTACTHGGLVEQGQRYYNM-------------------------MKNVHKI-----KPTP 550
L AC L+++G+ + + +KN HK+ T
Sbjct: 1043 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 1102
Query: 551 SHFASMVDLLGRAGLLQEA---YNFIENMPLEPDVVAWGSLLSACR 593
+ + M+ GL +EA +N ++ + + PD + + +LLSAC+
Sbjct: 1103 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 1148
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 54/291 (18%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN S+ S L+ + L N+ GK H +++ G V++ SL++ Y K S
Sbjct: 909 PNSSSMTSVLQAISELGFLNM-------GKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 961
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ A+ VFD M + + +WN+++S Y+ +G + A + N M D V+W +I
Sbjct: 962 LXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 1021
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y G + A +P ++T +L +C +L L GK++H ++ G
Sbjct: 1022 YAMWGCARKAF-----------MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIED 1070
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V V +L++MY+K A VF ++ K ++SWN
Sbjct: 1071 VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNC----------------------- 1107
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
MI G++ G EA+ +F N ++ + PD T + LSAC N
Sbjct: 1108 --------MIMGFAIFGLGKEAISVF-NEMQKVGVGPDAITFTALLSACKN 1149
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/643 (40%), Positives = 387/643 (60%), Gaps = 67/643 (10%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + ++L CT LG L GK VH V+ + + + NSLL MYA+ G
Sbjct: 72 PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGS------- 124
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ AR FD+M RD+V+W SMI GY+QN +AL
Sbjct: 125 ------------------------LEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDAL 160
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ML D + +P++FTL+S + C + G+QIHA C
Sbjct: 161 LLFPRMLSDGA-EPNEFTLSSLVKCCGYMASYNCGRQIHA-------------------C 200
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
K G + NV ++L+D Y + G +G A +FD L ++ V+W A
Sbjct: 201 CWKYG--------------CHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNA 246
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY + G ++A+ LF M REG +P +T SA+LS SS+ L+ GK +HA ++S
Sbjct: 247 LIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSS 306
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V N L+ MY+K+G+I A +VF+ + + + VS SM++ AQHGLG+EA Q F
Sbjct: 307 QKLVGYVGNTLLHMYAKSGSIRDAEKVFDKL-VKVDVVSCNSMLIGYAQHGLGKEAAQQF 365
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M+ GI+P+ IT++ VLTAC+H L+++G+ Y+ +M+ + I+P SH+A++VDLLGR
Sbjct: 366 DEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGR 424
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AGLL +A +FIE MP+EP V WG+LL A ++HKN ++G AA+++ ++P G ++ L
Sbjct: 425 AGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLL 484
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+S G+WED A +RK MK GVKK SWV+++N VHVF D HPQ++ I+
Sbjct: 485 ANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMW 544
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
K+ +IKE+G+VPDT+ VL V++ KE L++HSEKLA++F L++TP +T+RIMKN+
Sbjct: 545 EKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNI 604
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHSAIK++ +V REI+VRD RFHHF G CSC DYW
Sbjct: 605 RVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 203/426 (47%), Gaps = 65/426 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++L YA+ G L+ A +F+ MP+RD VSWT++I Y + R +A+ +F M+ D
Sbjct: 113 NSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE 172
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT++S++ C + + G+++H+ K G V V +SL++MYA+ G A V
Sbjct: 173 PNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLV 232
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + KN SW N++IAGY++ G EAL
Sbjct: 233 FDKLGCKNEVSW-------------------------------NALIAGYARKGEGEEAL 261
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ +P +FT ++ LS+C+++ L+ GK +HA+++++ G VGN L+
Sbjct: 262 ALFVRMQRE-GYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHM 320
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+K +FD L DVV+ +
Sbjct: 321 YAKSGSIRDAEK---------------------------------VFDKLVKVDVVSCNS 347
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
ML+GY Q+GL K+A + F M+R G +PN+ T ++L+ S LD GK +
Sbjct: 348 MLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYN 407
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+S ++ + +AG ++ A+ + W +++ A H E
Sbjct: 408 IEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAA 467
Query: 503 ERMLEL 508
+R+ EL
Sbjct: 468 QRVFEL 473
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 188/355 (52%), Gaps = 46/355 (12%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+++ SL+PD+ + L C L KLK GK +H +++ + F + N+L+ YA+
Sbjct: 63 DLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARC 122
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +E A+++ FD + RD+V+WT+M+ G
Sbjct: 123 GSLEGARRL---------------------------------FDEMPHRDMVSWTSMITG 149
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QN DA+ LF M+ +G +PN +TLS+++ +AS + G+QIHA + G S+
Sbjct: 150 YAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSN 209
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V ++L+ MY++ G + A VF+ + + E VSW ++I A+ G GEEA+ LF RM
Sbjct: 210 VFVGSSLVDMYARCGYLGEAMLVFDKLGCKNE-VSWNALIAGYARKGEGEEALALFVRMQ 268
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G +P TY +L++C+ G +EQG+ + ++MK+ K+ + +++ + ++G
Sbjct: 269 REGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN--TLLHMYAKSGS 326
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL-----LLIEPDN 615
+++A + + ++ DVV+ S+L H LGK AA++ IEP++
Sbjct: 327 IRDAEKVFDKL-VKVDVVSCNSMLIGYAQH---GLGKEAAQQFDEMIRFGIEPND 377
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 63/310 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA K G H +VF+ +SL++ YA+ + A VFD++ K SWN +++ YA+
Sbjct: 194 GRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYAR 253
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+G + A+ +FV M ++ PT+FT +++
Sbjct: 254 KGEGE-------------------------------EALALFVRMQREGYRPTEFTYSAL 282
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L+SC+++G L GK +H+ ++K+ V N+LL+MYAK
Sbjct: 283 LSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAK------------------- 323
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SG + A FD++++ DVV+ NSM+ GY+Q+G EA F M++
Sbjct: 324 ------------SGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIR- 370
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++P+ T S L+AC++ L GK + + + ++ + G ++
Sbjct: 371 FGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQ 430
Query: 332 AQKIVEQSGI 341
A+ +E+ I
Sbjct: 431 AKSFIEEMPI 440
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 27/253 (10%)
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
+P+ + +L + L L GK +H L S L + N+L+ MY++ G++ ARR
Sbjct: 71 EPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARR 130
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F+ + R + VSWTSMI AQ+ +A+ LF RML G +P+ T ++ C +
Sbjct: 131 LFDEMPHR-DMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGY-- 187
Query: 529 LVEQGQRYYNMMKNVH----KIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
YN + +H K + F +S+VD+ R G L EA + + + +
Sbjct: 188 -----MASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNE- 241
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD----NSGAYSALCNLYSS--C---GKWE 633
V+W +L++ + G+ A + ++ + YSAL + SS C GKW
Sbjct: 242 VSWNALIAG---YARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWL 298
Query: 634 DAANIRKSMKYVG 646
A ++ S K VG
Sbjct: 299 HAHLMKSSQKLVG 311
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+L YAK G + A +VF+ + D VS ++++ Y + G K A + F EM++ +
Sbjct: 315 NTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIE 374
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T SVL +C+ L GK + K + V+ +++++ + G AK+
Sbjct: 375 PNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSF 434
Query: 203 FDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD--VVTWNSMIAGYSQNGYDF 259
+ M ++ V+ W ++ ++ ++ E D ++++A + +
Sbjct: 435 IEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRW 494
Query: 260 EALGMFANMLKDSSLKPD 277
E + ++KDS +K +
Sbjct: 495 EDVAKVRKIMKDSGVKKE 512
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/684 (39%), Positives = 405/684 (59%), Gaps = 10/684 (1%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+ +S I ++++ F + IR+F M+ ++P + +V+ +C AL L GK++
Sbjct: 37 KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H F + +GL V +SLL+MY + A+ VFD + V + + ++S GR+
Sbjct: 97 HCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRV 156
Query: 228 DLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
+ F Q +E ++V+WN MI+G++++G +A+ MF NM + LKPD +++S
Sbjct: 157 KETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEG-LKPDGTSVSS 215
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L A +L+ +G QIH Y+I+ V +ALI Y K + + +
Sbjct: 216 VLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNE--MDE 273
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLR--DRDVVAWTAMLVGYEQNGLNKDAVELFR 401
++V A L+ G + G + A +F + D +VV+WT+M+ QNG + +A+ELFR
Sbjct: 274 VDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFR 333
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M EG KPN+ T+ +L ++A+L HGK H +LR+G + + V +ALI MY+K G
Sbjct: 334 EMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCG 393
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
+ A+R F+++ R VSW S++ A HG EAI +FE M G KPDH+++ VL
Sbjct: 394 RMLASRLCFDMMPNRN-LVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVL 452
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
+ACT GGL E+G Y++ M H ++ H++ MV LLGR+G L+EAY I+ MP EPD
Sbjct: 453 SACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPD 512
Query: 582 VVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
WG+LLS+CRVH +DLG+IAA+++ +EP N G Y L N+Y+S W + +R
Sbjct: 513 SCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDM 572
Query: 642 MKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
M+ G+KK G+SW++I+NKVH+ D HPQ I K+AK+ E+K+ G+VP T V
Sbjct: 573 MRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFV 632
Query: 702 LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDR 761
L DVEE KEQ+L HSEKLA+ GL++T L+++KNLR+C DCH+ IKFI R
Sbjct: 633 LQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKR 692
Query: 762 EIVVRDATRFHHFKKGLCSCRDYW 785
EI VRD RFH FK G+CSC DYW
Sbjct: 693 EIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 240/490 (48%), Gaps = 53/490 (10%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H + GL L + +SL++ Y + + + A+ VFD++P + + + ++S +A+
Sbjct: 93 GKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFAR 152
Query: 92 QGRLDLACEVF----NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+GR+ E+F +L + VSW +I +N G + +A+ MF M + + P +
Sbjct: 153 KGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTS 212
Query: 148 VTSVLASCTALGDLS---AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
V+SVL A+GDL G ++H +V+K GL V ++L++MY K VF+
Sbjct: 213 VSSVLP---AVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFN 269
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM--IERDVVTWNSMIAGYSQNGYDFEAL 262
M +V + N +V+ +G +D A F Q ++ +VV+W SMIA SQNG D EAL
Sbjct: 270 EMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEAL 329
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + +KP+ T+ L AC N+ L GK H + +R VG+ALI
Sbjct: 330 ELFREM-QIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDM 388
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G ++A +R FD + +R++V+W +
Sbjct: 389 YAKCG-----------------RMLA----------------SRLCFDMMPNRNLVSWNS 415
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS- 441
++ GY +G +A+ +F M R G KP++ + + +LS + + G S R+
Sbjct: 416 LMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNH 475
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEA 498
G + + + ++T+ ++G + A + + + ++ W +++ + H LGE A
Sbjct: 476 GVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIA 535
Query: 499 IQLFERMLEL 508
+ R+ EL
Sbjct: 536 AK---RVFEL 542
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 129/264 (48%), Gaps = 34/264 (12%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P +G +H +IK GL F+ ++L++ Y K S VF+EM + + N +++
Sbjct: 226 PLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTG 285
Query: 89 YAKQGRLDLACEVFNLMPNRD--SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
++ G +D A EVF D VSWT++I + ++ G+ A+ +F EM + V P
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSV 345
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T+ +L +C + L GK H F ++ G+ V V ++L++MYAK G + ++ FD M
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMM 405
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+N +V+WNS++AGY+ +G FEA+ +F
Sbjct: 406 PNRN-------------------------------LVSWNSLMAGYAMHGKTFEAINIF- 433
Query: 267 NMLKDSSLKPDKFTLASTLSACAN 290
+++ KPD + LSAC
Sbjct: 434 ELMQRCGQKPDHVSFTCVLSACTQ 457
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/737 (36%), Positives = 437/737 (59%), Gaps = 47/737 (6%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
++ +L++ + + + +A ++F ++ T+ N++L+ YAK +D A E F M RD
Sbjct: 175 VETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD 234
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
VSW +I ++ GR + A+ + VEM + V T TS L +C L L GK++H+
Sbjct: 235 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 294
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
V+++ V ++L+ +YAK G AK VF+ ++ +N SW V
Sbjct: 295 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV------------- 341
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
+I G Q +++ +F N ++ + D+F LA+ +S C
Sbjct: 342 ------------------LIGGSLQYECFSKSVELF-NQMRAELMAIDQFALATLISGCF 382
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
N L LG+Q+H+ +++ + V N+LIS YAK G ++ A+ + S +S +++++
Sbjct: 383 NRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF--SSMSERDIVSW 440
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV-REGP 408
T+++ Y +IG+I AR FD + R+ + W AML Y Q+G +D ++++ +M+ ++
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
P+ T + + + + G QI +++G ++SV+NA ITMYSK G I+ A++
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F+L++ + + VSW +MI +QHG+G++A + F+ ML G KPD+I+YV VL+ C+H G
Sbjct: 561 LFDLLNGK-DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LV++G+ Y++MM VH I P HF+ MVDLLGRAG L EA + I+ MP++P WG+L
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC++H N +L ++AA+ + ++ +SG+Y L +YS GK +D+A +RK M+ G+K
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G+SW++++NKVHVF +D HPQ AI NK+ ++ ++I +G+V E
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVR---------TES 790
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
+ ++ HHSEKLA+AFG++S P + IMKNLR+C DCH+ IK I + DRE V+RD
Sbjct: 791 PRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDG 848
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHFK G CSC DYW
Sbjct: 849 VRFHHFKSGSCSCGDYW 865
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 179/620 (28%), Positives = 296/620 (47%), Gaps = 83/620 (13%)
Query: 26 SRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD-EMPVKTLCSWN 83
SR G + +H R++ GL +VFL+N+L++ Y ++S A+++ ++ + + N
Sbjct: 16 SRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHN 75
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVL 142
+++ YAKQG L A E+F+ MP RD SW T++ Y + RF + + FV M + L
Sbjct: 76 IMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSL 135
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT V+ SC ALG ++ K G +V +L++M+ + G A +
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F + + N +++ + +D A F+ M ERDVV+WN MIA SQ+G EAL
Sbjct: 196 FSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREAL 255
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G+ M + ++ D T S+L+ACA L L GKQ+HA +IR+ V +ALI
Sbjct: 256 GLVVEMHR-KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIEL 314
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+R+F+SL+DR+ V+WT
Sbjct: 315 YAKCGSFK---------------------------------EAKRVFNSLQDRNSVSWTV 341
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G Q +VELF M E + + L+ ++S + L G+Q+H+ L+SG
Sbjct: 342 LIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG 401
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA------------ 490
++ VSN+LI++Y+K G++ A VF+ + R + VSWTSMI A +
Sbjct: 402 HNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-DIVSWTSMITAYSQIGNIIKAREFF 460
Query: 491 -------------------QHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLV 530
QHG E+ ++++ ML + + PD +TYV + C G
Sbjct: 461 DGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGAN 520
Query: 531 EQGQRYYNMMKNVHKIKP----TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G + H +K S + + + + G + EA + + DVV+W
Sbjct: 521 KLGDQIIG-----HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN-GKDVVSWN 574
Query: 587 SLLSACRVHKNLDLGKIAAE 606
++++ H +GK AA+
Sbjct: 575 AMITGYSQH---GMGKQAAK 591
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 243/515 (47%), Gaps = 40/515 (7%)
Query: 43 GLHLSVFLKNSLMNFYAKTESISYAK----KVFDEMPVKTLCSWNTILSAYAKQGRLDLA 98
G+ L S + A+ S+ + K KV +P + ++ YAK G A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
VFN + +R+SVSWT +I + F ++ +F +M + + QF + ++++ C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
DL G+++HS +K+G + + V+NSL+++YAK GD A+ VF M +++ SW ++
Sbjct: 385 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 444
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
+ + G + AR FD M R+ +TWN+M+ Y Q+G + + L M++ ML + PD
Sbjct: 445 TAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 504
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
T + CA++ KLG QI + ++ V NA I+ Y+K G + AQK
Sbjct: 505 VTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK---- 560
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+FD L +DVV+W AM+ GY Q+G+ K A +
Sbjct: 561 -----------------------------LFDLLNGKDVVSWNAMITGYSQHGMGKQAAK 591
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMY 457
F M+ +G KP+ + A+LS S + GK R G + L + ++ +
Sbjct: 592 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLL 651
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
+AG++ A+ + + + + W +++ A HG E A + + EL PD +Y
Sbjct: 652 GRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELD-SPDSGSY 710
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
+ + + G + + +M++ IK P +
Sbjct: 711 MLLAKIYSDAGKSDDSAQVRKLMRD-KGIKKNPGY 744
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 249/500 (49%), Gaps = 15/500 (3%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG- 205
+ L SC + G L+ + +H +V GL+ V + N+LL+ Y G A+ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
++ NV + N++++ + G L A FD+M RDV +WN++++GY Q + L F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+M + P+ FT + +C L +L Q+ + +F V AL+ + +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G V+ A ++ Q I + ++L GY K+ I A F+ + +RDVV+W M+
Sbjct: 186 CGYVDFASRLFSQ--IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIA 243
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Q+G ++A+ L M R+G + ++ T ++ L+ + L SL GKQ+HA +RS
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQI 303
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
V++ALI +Y+K G+ A+RVFN + R +VSWT +I Q+ ++++LF +M
Sbjct: 304 DPYVASALIELYAKCGSFKEAKRVFNSLQDRN-SVSWTVLIGGSLQYECFSKSVELFNQM 362
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAG 564
+ D +++ C + + G++ +++ +K+ H S+ S++ L + G
Sbjct: 363 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLISLYAKCG 420
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI--AAEKLLLIEPDNSGAYSAL 622
LQ A F+ + E D+V+W S+++A +G I A E ++ N+ ++A+
Sbjct: 421 DLQNA-EFVFSSMSERDIVSWTSMITAYS-----QIGNIIKAREFFDGMDTRNAITWNAM 474
Query: 623 CNLYSSCGKWEDAANIRKSM 642
Y G ED + +M
Sbjct: 475 LGAYIQHGAEEDGLKMYSAM 494
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 138/283 (48%), Gaps = 33/283 (11%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A L+ + +G+ +H+ +K G + ++ + NSL++ YAK + A+ VF M
Sbjct: 375 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 434
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ + SW ++++AY++ G + A E F+ M R++++W ++ Y + G ++ ++M+ M
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAM 494
Query: 137 V-QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ Q V P T ++ C +G G ++ VK GL V+V N+ + MY+K G
Sbjct: 495 LSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGR 554
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD + K+V SWN +MI GYSQ+
Sbjct: 555 ISEAQKLFDLLNGKDVVSWN-------------------------------AMITGYSQH 583
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
G +A F +ML + KPD + + LS C++ ++ GK
Sbjct: 584 GMGKQAAKTFDDMLSKGA-KPDYISYVAVLSGCSHSGLVQEGK 625
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/775 (37%), Positives = 443/775 (57%), Gaps = 69/775 (8%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL ++ R+ F GK +HA +K + S +L N +N Y+K +SYA+ FD
Sbjct: 11 FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTE 70
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ S+N I+ AYAK ++ +A ++F+ P D+VS+ T+I Y + A+ +F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + FT++ ++A+C DL K++H F V G +V N+ + Y+K G
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +VF GM D + RD V+WNSMI Y Q+
Sbjct: 189 LREAVSVFYGM----------------------------DGL--RDEVSWNSMIVAYGQH 218
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+AL ++ M+ K D FTLAS L+A +L+ L G+Q H +I+ F V
Sbjct: 219 KEGAKALALYKEMIF-KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G+ LI Y+K GG + G+S + ++F +
Sbjct: 278 GSGLIDFYSKCGG---------RDGMS---------------------DSEKVFQEILSP 307
Query: 376 DVVAWTAMLVGYEQNGLN-KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D+V W M+ GY N + ++AV+ FR M R G +P++ + + S S+L+S GKQI
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI 367
Query: 435 HASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
H A++S S+ +SV+NALI++Y K+GN+ ARRVF+ + VS+ MI AQHG
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP-ELNAVSFNCMIKGYAQHG 426
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G EA++L++RML+ GI P++IT+V +L+AC H G V++GQ+Y+N MK KI+P H+
Sbjct: 427 HGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY 486
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
+ M+DLLGRAG L+EA FI+ MP +P VAW +LL ACR HKN+ L + AA++L++++P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQP 546
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
+ Y L N+Y+ GKWE+ A++RKSM+ ++K G SW++++ K HVF EDW HP
Sbjct: 547 LAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDT--ASVLHDVEEDVKEQM-LRHHSEKLAIAFGLIST 730
+ + ++ ++K++G+V D A V D + +E+M L HHSEKLA+AFGL+ST
Sbjct: 607 MIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMST 666
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + ++KNLR+C DCH+AIKF+ + REI+VRD RFH FK G CSC DYW
Sbjct: 667 RDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/779 (35%), Positives = 417/779 (53%), Gaps = 98/779 (12%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P EF ++ ++ + SRN G+ VHA +++ G VF N+L++ Y K
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK------ 249
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
GR+D+A +F MP+ D VSW +I G
Sbjct: 250 -------------------------MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
AI + ++M ++P FT++S+L +C+ G G+++H F++K + L
Sbjct: 285 HRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK + LD AR FD M RD++ N
Sbjct: 345 VDMYAK-------------------------------NHFLDDARKVFDWMFHRDLILCN 373
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
++I+G S G EAL +F + K+ L ++ TLA+ L + A+LE +Q+HA ++
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEG-LGVNRTTLAAVLKSTASLEAASTTRQVHALAVK 432
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F V N LI D Y K + A
Sbjct: 433 IGFIFDAHVVNGLI---------------------------------DSYWKCSCLSDAN 459
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+F+ D++A T+M+ Q + A++LF M+R+G +P+ + LS++L+ +SL+
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ + GKQ+HA ++ S NAL+ Y+K G+I A F+ + R VSW++MI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 578
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
LAQHG G+ A++LF RM++ GI P+HIT VL AC H GLV++ +RY+N MK + I
Sbjct: 579 GGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGI 638
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
T H++ M+DLLGRAG L +A + +MP + + WG+LL A RVHK+ +LGK+AAE
Sbjct: 639 DRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAE 698
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL ++EP+ SG + L N Y+S G W + A +RK MK +KK SW+++++KVH F
Sbjct: 699 KLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFI 758
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D HP IY K+ ++ D + + GFVP+ LHD++ KE +L HHSE+LA+AF
Sbjct: 759 VGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFA 818
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+STP +R+ KNLR+C DCH A KFI K+V REI++RD RFHHF+ G CSC DYW
Sbjct: 819 LLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 185/698 (26%), Positives = 303/698 (43%), Gaps = 156/698 (22%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA ++K G L+ F +N L++FY+K A++VFDE+P SW+++++AY+
Sbjct: 23 GAHLHASLLKSG-SLASF-RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 92 QGRLDLACEVFNLM-------------------PN-----------------RDSVSWTT 115
G A + F+ M P+ D
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANA 140
Query: 116 IIVTYNEIGRFKNAIRMFVE--------------------------------MVQDQVLP 143
++ Y G +A R+F E MV + P
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
T+F + V+ +CT ++ AG++VH+ VV+ G V N+L++MY K+G +A +F
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+ M +V SW N++I+G NG+D A+
Sbjct: 261 EKMPDSDVVSW-------------------------------NALISGCVLNGHDHRAIE 289
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+ M K S L P+ FTL+S L AC+ LG+QIH ++I+ D+ +G L+ Y
Sbjct: 290 LLLQM-KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK LD AR++FD + RD++ A+
Sbjct: 349 AK------------------------NHFLD---------DARKVFDWMFHRDLILCNAL 375
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ G G + +A+ LF + +EG N TL+A+L ++SL + +Q+HA A++ G
Sbjct: 376 ISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGF 435
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
V N LI Y K ++ A RVF + ++ TSMI AL+Q GE AI+LF
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECS-SGDIIACTSMITALSQCDHGEGAIKLFM 494
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT--PSHFA--SMVDL 559
ML G++PD +L AC EQG++ + H IK FA ++V
Sbjct: 495 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVH-----AHLIKRQFMSDAFAGNALVYT 549
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDL-GKIAAEKLLLIEPD 614
+ G +++A ++P E VV+W +++ H + L+L G++ E I P+
Sbjct: 550 YAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG---INPN 605
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYV-GVKKTQ 651
+ S LC + G ++A SMK + G+ +T+
Sbjct: 606 HITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTE 642
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T+S L+ ++ +L G +HAS L+SG +S N LI+ YSK ARRVF+ I
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRVFDEI 63
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
VSW+S++ A + +GL AIQ F M G+ + VL L Q
Sbjct: 64 P-DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQ- 121
Query: 534 QRYYNMMKNVHKIKPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
VH + + F S +V + G G + +A E + V+W
Sbjct: 122 ---------VHAM-AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWN 171
Query: 587 SLLSA 591
L+SA
Sbjct: 172 GLMSA 176
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/779 (35%), Positives = 417/779 (53%), Gaps = 98/779 (12%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P EF ++ ++ + SRN G+ VHA +++ G VF N+L++ Y K
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK------ 249
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
GR+D+A +F MP+ D VSW +I G
Sbjct: 250 -------------------------MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
AI + ++M ++P FT++S+L +C+ G G+++H F++K + L
Sbjct: 285 HRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK + LD AR FD M RD++ N
Sbjct: 345 VDMYAK-------------------------------NHFLDDARKVFDWMFHRDLILCN 373
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
++I+G S G EAL +F + K+ L ++ TLA+ L + A+LE +Q+HA ++
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEG-LGVNRTTLAAVLKSTASLEAASTTRQVHALAVK 432
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F V N LI D Y K + A
Sbjct: 433 IGFIFDAHVVNGLI---------------------------------DSYWKCSCLSDAN 459
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+F+ D++A T+M+ Q + A++LF M+R+G +P+ + LS++L+ +SL+
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ + GKQ+HA ++ S NAL+ Y+K G+I A F+ + R VSW++MI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 578
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
LAQHG G+ A++LF RM++ GI P+HIT VL AC H GLV++ +RY+N MK + I
Sbjct: 579 GGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGI 638
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
T H++ M+DLLGRAG L +A + +MP + + WG+LL A RVHK+ +LGK+AAE
Sbjct: 639 DRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAE 698
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL ++EP+ SG + L N Y+S G W + A +RK MK +KK SW+++++KVH F
Sbjct: 699 KLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFI 758
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D HP IY K+ ++ D + + GFVP+ LHD++ KE +L HHSE+LA+AF
Sbjct: 759 VGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFA 818
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+STP +R+ KNLR+C DCH A KFI K+V REI++RD RFHHF+ G CSC DYW
Sbjct: 819 LLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 159/651 (24%), Positives = 273/651 (41%), Gaps = 137/651 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA ++K G L+ F +N L++FY+K A++ FDE+
Sbjct: 23 GAHLHASLLKSG-SLASF-RNHLISFYSKCRRPCCARRFFDEI----------------- 63
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
P+ VSW++++ Y+ G ++AI+ F M + V +F + V
Sbjct: 64 --------------PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVV 109
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + D G +VH+ + TG V V N+L+ MY G
Sbjct: 110 L---KCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFG----------------- 149
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM-IERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+D AR F++ ER+ V+WN +++ Y +N +A+ +F M+
Sbjct: 150 --------------FMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVW 195
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S ++P +F + ++AC ++ G+Q+HA ++R +D NAL+ Y K+G V+
Sbjct: 196 -SGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD 254
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
IA IF+ + D DVV+W A++ G N
Sbjct: 255 IASV---------------------------------IFEKMPDSDVVSWNALISGCVLN 281
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G + A+EL M G PN +TLS++L S + D G+QIH +++ S +
Sbjct: 282 GHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIG 341
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
L+ MY+K ++ AR+VF+ + + ++ + ++I + G +EA+ LF + + G+
Sbjct: 342 VGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 511 KPDHITYVGVL-----------TACTHGGLVEQG------------QRYY--NMMKNVHK 545
+ T VL T H V+ G Y+ + + + ++
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460
Query: 546 IKPTPSH-----FASMVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKN 597
+ S SM+ L + + A M LEPD SLL+AC
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520
Query: 598 LDLGKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
+ GK L+ + ++ A +AL Y+ CG EDA S+ GV
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGV 571
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T+S L+ ++ +L G +HAS L+SG +S N LI+ YSK ARR F+ I
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEI 63
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
VSW+S++ A + +GL AIQ F M G+ + VL L Q
Sbjct: 64 P-DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQ- 121
Query: 534 QRYYNMMKNVHKIKPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
VH + + F S +V + G G + +A E + V+W
Sbjct: 122 ---------VHAM-AMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWN 171
Query: 587 SLLSA 591
L+SA
Sbjct: 172 GLMSA 176
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/762 (35%), Positives = 436/762 (57%), Gaps = 72/762 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYA---KTESISYAKKVFDEMPVKTLCSWNTILSA 88
G +HA+ I GLH +F + L++F++ + + +++ +F ++ L WNT++
Sbjct: 25 GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-TQFT 147
Y++ P + AI +++ M+ + P FT
Sbjct: 85 YSRSDN-----------P--------------------REAIVLYMSMIAKGIAPPNNFT 113
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+L SC L L G +VHS ++K G + V N+L+++Y+ VF
Sbjct: 114 FPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYS----------VF---- 159
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
G L+LAR FD+ + RD+V++N+MI GY++ AL +F
Sbjct: 160 -----------------GNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGE 202
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT--EFDATGPVGNALISCYAK 325
M ++S + PD+FT + S C+ L + +GKQIHA + + D+ + +A++ YAK
Sbjct: 203 M-QNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAK 261
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G + IA+++ G S + A+++++ GY + G+I AR++F+ + +RDV++WTAM+
Sbjct: 262 CGLINIAERVFSTMGTSK-SAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY Q G +A+ELF+ M G KP+ TL A+LS + L + D GK+++ + +G +
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN 380
Query: 446 SLSV-SNALITMYSKAGNINAARRVFNLIHWRQET-VSWTSMIVALAQHGLGEEAIQLFE 503
++ + A++ MY+K G+I++A +F + +T + SMI LAQHGLGE AI +F
Sbjct: 381 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFR 440
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
++ G+KPD +T+VGVL AC H GL+E+G++ + M N + IKP H+ MVDLLGR
Sbjct: 441 ELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRY 500
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L+EAY+ ++ MP E + V W +LLSACR H N+ +G+IA +KLL +E + Y L
Sbjct: 501 GCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLS 560
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+ + +WE+A +RK M+ G++K G+S++++ +H F D HPQ I +
Sbjct: 561 NILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLK 620
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ +K G+VP+TA V+ D++E+ KE ++ +HSEKLA+AFGL+ T+RI+KNLR
Sbjct: 621 DMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLR 680
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+C DCH A K + ++ REI VRD RFHHF+ G CSC D+W
Sbjct: 681 ICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 235/528 (44%), Gaps = 110/528 (20%)
Query: 192 KVGDEMMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
K G ++ A+ + +G+ ++ ++S SL LD +R F Q+ ++ WN+MI
Sbjct: 23 KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMI 82
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GYS++ EA+ ++ +M+ P+ FT L++CA L L+ G ++H++II+ F
Sbjct: 83 RGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGF 142
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
++ V NALI Y+ G + +A+ + ++S + +++++ T++ GY ++
Sbjct: 143 ESDLFVRNALIHLYSVFGNLNLARTLFDESLVR--DLVSYNTMIKGYAEVNQ-------- 192
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ A+ LF M G P+ +T A+ SV S L +
Sbjct: 193 -----------------------PESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPN 229
Query: 430 HGKQIHASA---LRS-------------------------------GEASSLSVSNALIT 455
GKQIHA LRS G + S + ++++
Sbjct: 230 VGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVC 289
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
Y++ G IN AR++FN +H R + +SWT+MI +Q G EA++LF+ M LGIKPD +
Sbjct: 290 GYARCGEINVARKLFNHMHER-DVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEV 348
Query: 516 TYVGVLTACTHGGLVEQGQRYYN---------------------------------MMKN 542
T V VL+AC G + G+R Y+ + +
Sbjct: 349 TLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRR 408
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLD 599
V K T F SM+ L + GL + A + L+PD V + +L AC ++
Sbjct: 409 VGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIE 468
Query: 600 LGKIAAEKLL---LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
GK E + I+P Y + +L G E+A ++ + M +
Sbjct: 469 EGKKLFESMFNAYGIKPQME-HYGCMVDLLGRYGCLEEAYDLVQKMPF 515
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 178/349 (51%), Gaps = 49/349 (14%)
Query: 29 PFVGKLVHARIIKC--GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV-KTLCSWNTI 85
P VGK +HA++ K + ++ LK+++++ YAK I+ A++VF M K+ +W+++
Sbjct: 228 PNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSM 287
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
+ YA+ G +++A ++FN M RD +SWT +I Y++ G+ A+ +F EM + P +
Sbjct: 288 VCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDE 347
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV-TNSLLNMYAKVGDEMMAKAVFD 204
T+ +VL++C LG GK+++ ++ G+ + T ++++MYAK G A +F
Sbjct: 348 VTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFR 407
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ KN+ + V +NSMIAG +Q+G A+ +
Sbjct: 408 RVG-KNMKTGFV----------------------------FNSMIAGLAQHGLGETAITV 438
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI-----HAYIIRTEFDATGPVGNAL 319
F ++ + LKPD+ T L AC + ++ GK++ +AY I+ + + G +
Sbjct: 439 FRELI-STGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYG----CM 493
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD-----GYIKIGDIG 363
+ + G +E A +V++ N + + LL G +KIG+I
Sbjct: 494 VDLLGRYGCLEEAYDLVQKMPFE-ANSVIWRALLSACRTHGNVKIGEIA 541
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/719 (37%), Positives = 410/719 (57%), Gaps = 79/719 (10%)
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV-SWTTIIVTYNEIGRFKNAIRMFVE 135
+++C+ + Y+ L +FN ++ +V SW ++I G A+R F
Sbjct: 86 RSICAGAVLRRRYSNNPNLT---TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSS 142
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + P + T + SC+AL DL +G++ H + G + V+++L++MY+K G+
Sbjct: 143 MRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGE 202
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
L AR FD++ R++V+W SMI GY QN
Sbjct: 203 -------------------------------LRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 256 GYDFEALGMFANML-------KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
AL +F L D + D + S LSAC+ + + + + +H ++I+
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
F+ V N TL+D Y K G++G +RR+
Sbjct: 292 FEGDLGVEN---------------------------------TLMDAYAKCGELGVSRRV 318
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLAS 427
FD + +RDV++W +++ Y QNG++ +++E+F MV++G N TLSA+L + S
Sbjct: 319 FDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGS 378
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMI 486
GK IH ++ G S++ V ++I MY K G + AR+ F+ + R++ V SW++M+
Sbjct: 379 QRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM--REKNVKSWSAMV 436
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
HG +EA+++F M G+KP++IT+V VL AC+H GL+E+G ++ M + +
Sbjct: 437 AGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDV 496
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+P H+ MVDLLGRAG L+EA++ I+ M L PD V WG+LL ACR+HKN+DLG+I+A
Sbjct: 497 EPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISAR 556
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL ++P N G Y L N+Y+ G+WED +R MK G+ K GFS V I+ +VHVF
Sbjct: 557 KLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFL 616
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D HPQ + IY + K+ +++E+G+VPD SVLHDV + KE +LR HSEKLA+AFG
Sbjct: 617 VGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFG 676
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++T TT+ I+KNLRVC DCH+AIKFI K+VDREIVVRD+ RFHHF+ GLCSC DYW
Sbjct: 677 IMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 62/263 (23%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
VH +IK G + ++N+LM+ YAK + +++VFD M + + SWN+I++ YA+ G
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ E+F+ M +++ + T+++VL +
Sbjct: 343 STESMEIFHRMVKDGEINYNAV------------------------------TLSAVLLA 372
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C G GK +H V+K GL V V S+++MY K G MA+ FD MR KNV S
Sbjct: 373 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKS- 431
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
W++M+AGY +G+ EAL +F M + +
Sbjct: 432 ------------------------------WSAMVAGYGMHGHAKEALEVFYEM-NMAGV 460
Query: 275 KPDKFTLASTLSACANLEKLKLG 297
KP+ T S L+AC++ L+ G
Sbjct: 461 KPNYITFVSVLAACSHAGLLEEG 483
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 48/262 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H ++IK GL +VF+ S+++ Y K + A+K FD M K + SW+ +++ Y
Sbjct: 381 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 440
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G K A+ +F EM V P T S
Sbjct: 441 MHGHA-------------------------------KEALEVFYEMNMAGVKPNYITFVS 469
Query: 151 VLASCTALGDLSAG-----KKVHSFVVKTGLS--GCVNVTNSLLNMYAKVGDEMMAKAVF 203
VLA+C+ G L G H F V+ G+ GC ++++ + G A +
Sbjct: 470 VLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC------MVDLLGRAGYLKEAFDLI 523
Query: 204 DGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV--VTWNSMIAGYSQNGYDFE 260
GM+L+ + W ++ +DL ++ E D + +++ + +E
Sbjct: 524 KGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWE 583
Query: 261 ALGMFANMLKDSSL-KPDKFTL 281
+ ++K+S L KP F+L
Sbjct: 584 DVERMRILMKNSGLVKPPGFSL 605
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/736 (36%), Positives = 434/736 (58%), Gaps = 51/736 (6%)
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+L++ + + ++ A ++F + T+ N++L Y K +D A E+F+ MP RD VS
Sbjct: 178 ALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVS 237
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++ ++ GR + A+ M V+M V T TS L +C L L GK++H+ V+
Sbjct: 238 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297
Query: 173 KTGLSGCVN--VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
+ C++ V ++L+ +YAK G AK VF+ SLH
Sbjct: 298 RN--LPCIDPYVASALVELYAKCGCFKEAKGVFN--------------SLH--------- 332
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
+R+ V W +IAG+ Q+G E++ +F N ++ + D+F LA+ +S C +
Sbjct: 333 --------DRNNVAWTVLIAGFLQHGCFTESVELF-NQMRAELMTLDQFALATLISGCCS 383
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
L LG+Q+H+ +++ V N+LIS YAK ++ A+ I ++ +++++T
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRF--MNEKDIVSWT 441
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-K 409
+++ + ++G+I AR FD + ++V+ W AML Y Q+G +D + ++ M+ E +
Sbjct: 442 SMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVR 501
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P+ T + + L + G QI ++ G SV+NA+ITMYSK G I AR+V
Sbjct: 502 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKV 561
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ ++ + + VSW +MI +QHG+G++AI++F+ +L+ G KPD+I+YV VL+ C+H GL
Sbjct: 562 FDFLNVK-DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 620
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
V++G+ Y++MMK VH I P HF+ MVDLLGRAG L EA + I+ MP++P WG+LL
Sbjct: 621 VQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALL 680
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
SAC++H N +L ++AA+ + ++ +SG+Y + +Y+ GK +D+A IRK M+ G+KK
Sbjct: 681 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 740
Query: 650 TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G+SW+++ NKVHVF +D HPQ AI K+ ++ ++I +G+V T S ++
Sbjct: 741 NPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVR-TDSPRSEI---- 795
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
HHSEKLA+AFGL+S P + IMKNLR+C DCH+ IK I + RE V+RDA
Sbjct: 796 ------HHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAV 849
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHF G CSC DYW
Sbjct: 850 RFHHFNGGSCSCGDYW 865
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/605 (28%), Positives = 298/605 (49%), Gaps = 74/605 (12%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF-DEMPVKTLCSWNTILSAYAKQGR 94
H R++ GL +VFL+N+L++ Y ++ A+++ ++ + + N +L+ Y K GR
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLA 153
L A E+F MP RD SW T++ Y + ++ ++ FV M + P FT +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC ALG+ S ++ V K G +V +L++M+ + G +A +F ++ +
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
N ++ ++ + +D A FD M ERDVV+WN M++ SQ+G EAL M +M +
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QSKG 265
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
++ D T S+L+ACA L L+ GKQ+HA +IR V +AL+ YAK G +
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFK--- 322
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
A+ +F+SL DR+ VAWT ++ G+ Q+G
Sbjct: 323 ------------------------------EAKGVFNSLHDRNNVAWTVLIAGFLQHGCF 352
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
++VELF M E + + L+ ++S S L G+Q+H+ L+SG+ ++ VSN+L
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 412
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA----------------------- 490
I+MY+K N+ +A +F ++ ++ VSWTSMI A +
Sbjct: 413 ISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITW 471
Query: 491 --------QHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
QHG E+ ++++ ML E ++PD +TYV + C G + G +
Sbjct: 472 NAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTV 531
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
V I T S +++ + + G + EA + + ++ D+V+W ++++ H +G
Sbjct: 532 KVGLILDT-SVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQH---GMG 586
Query: 602 KIAAE 606
K A E
Sbjct: 587 KQAIE 591
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 245/522 (46%), Gaps = 67/522 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA++I+ + ++ ++L+ YAK AK VF+ + + +W +++ + +
Sbjct: 289 GKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQ 348
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G C F ++ +F +M + + QF + ++
Sbjct: 349 HG-----C--------------------------FTESVELFNQMRAELMTLDQFALATL 377
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
++ C + DL G+++HS +K+G V V+NSL++MYAK + A+++F M K++
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDI 437
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW +++ H G + AR FD M ++V+TWN+M+ Y Q+G + + L M+ ML +
Sbjct: 438 VSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSE 497
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++PD T + CA+L KLG QI ++ V NA+I+ Y+K G
Sbjct: 498 KDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCG---- 553
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+I+E AR++FD L +D+V+W AM+ GY Q+G
Sbjct: 554 --RILE---------------------------ARKVFDFLNVKDIVSWNAMITGYSQHG 584
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVS 450
+ K A+E+F +++ G KP+ + A+LS S + GK R S L
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHF 644
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ ++ + +AG++ A+ + + + + W +++ A HG E A + + EL
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELD- 703
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
PD +Y+ + G + + +M++ IK P +
Sbjct: 704 SPDSGSYMLMAKIYADAGKSDDSAQIRKLMRD-KGIKKNPGY 744
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 245/500 (49%), Gaps = 25/500 (5%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL--- 208
L SC A G L+ + +H +V GL+ V + N+LL+ Y G A+ D RL
Sbjct: 11 LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCG------ALPDARRLLLT 64
Query: 209 ----KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
NV + NV+++ ++ GRL A F +M RDV +WN++++GY Q+ +L
Sbjct: 65 DIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLES 124
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F +M + P+ FT A + +C L + L Q+ + + V AL+ +
Sbjct: 125 FVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFV 184
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ G V++A ++ + I + ++L GY+K + A +FDS+ +RDVV+W M+
Sbjct: 185 RCGTVDLASRLFVR--IKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMV 242
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Q+G ++A+++ M +G + ++ T ++ L+ + L+SL GKQ+HA +R+
Sbjct: 243 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPC 302
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
V++AL+ +Y+K G A+ VFN +H R V+WT +I QHG E+++LF +
Sbjct: 303 IDPYVASALVELYAKCGCFKEAKGVFNSLHDRN-NVAWTVLIAGFLQHGCFTESVELFNQ 361
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + D +++ C + G++ +++ +I+ S++ + +
Sbjct: 362 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCD 420
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSAL 622
LQ A + M E D+V+W S+++A + +G IA + + N ++A+
Sbjct: 421 NLQSAESIFRFMN-EKDIVSWTSMITA-----HSQVGNIAKAREFFDGMSTKNVITWNAM 474
Query: 623 CNLYSSCGKWEDAANIRKSM 642
Y G ED + M
Sbjct: 475 LGAYIQHGAEEDGLRMYNVM 494
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 185/406 (45%), Gaps = 67/406 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H+ +K G +V + NSL++ YAK +++ A+ +F M K + SW ++++A++
Sbjct: 389 LGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHS 448
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTVT 149
+ G + A E F+ M ++ ++W ++ Y + G ++ +RM+ M+ ++ V P T
Sbjct: 449 QVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYV 508
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C LG G ++ VK GL +V N+++ MY+K G + A+ VFD + +K
Sbjct: 509 TLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVK 568
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ SW N+MI GYSQ+G +A+ +F ++L
Sbjct: 569 DIVSW-------------------------------NAMITGYSQHGMGKQAIEIFDDIL 597
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K + KPD + + LS C++ ++ GK + FD V N
Sbjct: 598 KRGA-KPDYISYVAVLSGCSHSGLVQEGK--------SYFDMMKRVHNI----------- 637
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV-AWTAMLVGYE 388
G+ + F+ ++D + G + A+ + D + + W A+L +
Sbjct: 638 --------SPGLEH-----FSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACK 684
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+G N + EL V E P++ + M + + D QI
Sbjct: 685 IHG-NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQI 729
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/706 (37%), Positives = 405/706 (57%), Gaps = 68/706 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++ AY + GR+ A F+ M +RD +W ++ R A+ +F MV + V
Sbjct: 108 GALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVA 167
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
TV+SVL C LGD + +H + VK GL + V N+++++Y K+G
Sbjct: 168 GDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLG-------- 219
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ R FD M RD+VTWNS+I+G+ Q G A+
Sbjct: 220 -----------------------MLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAV 256
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
MF M +DS + PD TL S SA A + G+ +H Y++R +D
Sbjct: 257 EMFCGM-RDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWD------------ 303
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
VG ++IA ++D Y K+ I A+R+FDS+ RD V+W
Sbjct: 304 ---VG-----------------DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNT 343
Query: 383 MLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY QNGL +A+ ++ M + EG KP T ++L S L +L G ++HA ++++
Sbjct: 344 LITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKT 403
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + V +I +Y+K G ++ A +F R+ T W ++I + HG G +A+ L
Sbjct: 404 GLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP-RRSTGPWNAVISGVGVHGHGAKALSL 462
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M + GI PDH+T+V +L AC+H GLV+QG+ ++NMM+ + IKP H+A MVD+ G
Sbjct: 463 FSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFG 522
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L +A++FI NMP++PD WG+LL ACR+H N+++GK+A++ L ++P N G Y
Sbjct: 523 RAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVL 582
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF--GVEDWLHPQRDAIY 679
+ N+Y+ GKW+ +R ++ ++KT G+S ++++ V+VF G + +HPQ + I
Sbjct: 583 MSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQ 642
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
++ + +I+ +G+VPD + VL DVEED KEQ+L +HSE+LAIAFG+I+TP T L I
Sbjct: 643 RELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIY 702
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH+A K+I K+ +REI+VRD+ RFHHFK G CSC D+W
Sbjct: 703 KNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 208/489 (42%), Gaps = 107/489 (21%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H +K GL +F+ N++++ Y K + +KVFD M + L +WN+I+S + +QG
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH-EQG- 249
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
G+ +A+ MF M V P T+ S+ ++
Sbjct: 250 -----------------------------GQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 155 CTALGDLSAGKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
GD+ G+ VH ++V+ G G + N++++MYAK+ A+ +FD M +++ S
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
W N++I GY QNG EA+ ++ +M K
Sbjct: 341 W-------------------------------NTLITGYMQNGLASEAIHVYDHMQKHEG 369
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
LKP + T S L A ++L L+ G ++HA I+T + VG +I YAK G ++ A
Sbjct: 370 LKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAM 429
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ EQ+ R W A++ G +G
Sbjct: 430 LLFEQT---------------------------------PRRSTGPWNAVISGVGVHGHG 456
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA- 452
A+ LF M +EG P++ T ++L+ S +D G+ + ++ A
Sbjct: 457 AKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYAC 516
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ-LFERMLEL 508
++ M+ +AG ++ A + + ++ W +++ A HG +G+ A Q LFE
Sbjct: 517 MVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFE----- 571
Query: 509 GIKPDHITY 517
+ P ++ Y
Sbjct: 572 -LDPKNVGY 579
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+ A L+ Y++ G + A R FD +R RDV AW AML G +N +AV LF MV
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
EG + T+S++L + L +H A++ G L V NA+I +Y K G +
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
R+VF+ + R + V+W S+I Q G A+++F M + G+ PD +T + + +A
Sbjct: 223 EVRKVFDGMSSR-DLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAI 281
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDV 582
G + G+ + M V + A ++VD+ + ++ A ++MP+ D
Sbjct: 282 AQCGDICGGRSVHCYM--VRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DA 338
Query: 583 VAWGSLLSA 591
V+W +L++
Sbjct: 339 VSWNTLITG 347
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 32 GKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VH +++ G + + N++++ YAK I A+++FD MPV+ SWNT+++ Y
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM 349
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G A V++ M + + P Q T S
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLK------------------------------PIQGTFVS 379
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + + LG L G ++H+ +KTGL+ V V ++++YAK G A +F+ ++
Sbjct: 380 VLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRS 439
Query: 211 VSSWNVVVS---LHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALG 263
WN V+S +H H + A + F QM I D VT+ S++A S G +
Sbjct: 440 TGPWNAVISGVGVHGHGAK---ALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRN 496
Query: 264 MFANMLKDSSLKP 276
F M +KP
Sbjct: 497 FFNMMQTAYGIKP 509
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/754 (35%), Positives = 420/754 (55%), Gaps = 98/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHAR+ + GL +++ +L LS Y K
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTAL-------------------------------LSMYTK 353
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++ A EVFNL+ R+ VSWT +I + + GR + A F +M++ + P + T S+
Sbjct: 354 CGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSI 413
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C+ L G+++H ++K G V +LL+MYAK G M A+ VF+
Sbjct: 414 LGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFE------- 466
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
++ +++VV WN+MI Y Q+ A+ F +LK+
Sbjct: 467 ------------------------RISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKE 502
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+KPD T S L+ C + + L+LGK + + IIR F++ + NAL+S +
Sbjct: 503 G-IKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMF-------- 553
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+ GD+ A +F+ + +RD+V+W ++ G+ Q+G
Sbjct: 554 -------------------------VNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHG 588
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
N+ A + F+ M G KP+ T + +L+ +S +L G+++HA + + V
Sbjct: 589 ENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGT 648
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI+MY+K G+I+ A VF+ + ++ SWTSMI AQHG G+EA++LF +M + G+K
Sbjct: 649 GLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVK 707
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD IT+VG L+AC H GL+++G ++ MK+ + I+P H+ MVDL GRAGLL EA
Sbjct: 708 PDWITFVGALSACAHAGLIKEGLHHFESMKDFN-IEPRMEHYGCMVDLFGRAGLLHEAVE 766
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI M ++PD WG+LL AC+VH +++L + A+K L ++P++ G Y L N+Y++ G
Sbjct: 767 FINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGM 826
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W++ +RK M GV K G SW+++ +VH+F +D HPQ + I+ ++ ++ E+K+
Sbjct: 827 WKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKK 886
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+VPDT VLHDVE+ KE L HHSE+LAIA+GL+ TP T + I KNLRVC DCH+A
Sbjct: 887 LGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTA 946
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+ R+I+ RD+ RFHHFK G+CSC D+W
Sbjct: 947 TKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 276/592 (46%), Gaps = 101/592 (17%)
Query: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
+ P + + Y+ LLQ +K +N G+ +H I + +F+ N L++ YAK +
Sbjct: 96 DSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNT 155
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
+ AK++FDEMP K + SWN +L Y +
Sbjct: 156 NSAKQIFDEMPDKDVYSWNLLLGGYVQH-------------------------------R 184
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
R++ A R+ +MVQD V P ++T +L +C ++ G ++ S ++ G + V
Sbjct: 185 RYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGT 244
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L+NM+ K G V D +++ F+ + RD++T
Sbjct: 245 ALINMHIKCG------GVDDALKV-------------------------FNNLPRRDLIT 273
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W SMI G +++ +A +F ++++ ++PDK S L AC + E L+ GK++HA +
Sbjct: 274 WTSMITGLARHRQFKQACNLF-QVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM 332
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
D VG AL+S Y K G +E
Sbjct: 333 KEVGLDTEIYVGTALLSMYTKCGSME---------------------------------D 359
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A +F+ ++ R+VV+WTAM+ G+ Q+G ++A F M+ G +PN T ++L S
Sbjct: 360 ALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSR 419
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++L G+QIH +++G + V AL++MY+K G++ AR VF I +Q V+W +
Sbjct: 420 PSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNA 478
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI A QH + A+ F+ +L+ GIKPD T+ +L C +E G+ +++ +
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLI--IR 536
Query: 545 KIKPTPSHFA-SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ H ++V + G L A N +MP E D+V+W ++++ H
Sbjct: 537 AGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQH 587
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/568 (26%), Positives = 275/568 (48%), Gaps = 78/568 (13%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT-------ILS 87
+H ++++ G+ + ++N A +++ ++F + W+T +++
Sbjct: 192 LHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFS---LILNAGWDTDLFVGTALIN 248
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+ K G +D A +VFN +P RD ++WT++I +FK A +F M ++ V P +
Sbjct: 249 MHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVA 308
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
S+L +C L GK+VH+ + + GL + V +LL+MY K G A VF+ ++
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+NV SW +++ GR++ A F++MIE
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE---------------------------- 400
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
S ++P++ T S L AC+ LK G+QIH II+ + V AL+S YAK G
Sbjct: 401 ----SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCG 456
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A+ + E+ IS NV VAW AM+ Y
Sbjct: 457 SLMDARNVFER--ISKQNV-------------------------------VAWNAMITAY 483
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q+ +AV F+++++EG KP++ T +++L+V S +L+ GK + + +R+G S L
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDL 543
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ NAL++M+ G++ +A +FN + R + VSW ++I QHG + A F+ M E
Sbjct: 544 HIRNALVSMFVNCGDLMSAMNLFNDMPER-DLVSWNTIIAGFVQHGENQFAFDYFKMMQE 602
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G+KPD IT+ G+L AC + +G+R + ++ + ++ + + G +
Sbjct: 603 SGVKPDQITFTGLLNACASPEALTEGRRLHALITEA-ALDCDVVVGTGLISMYTKCGSID 661
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVH 595
+A+ N+P + +V +W S+++ H
Sbjct: 662 DAHLVFHNLP-KKNVYSWTSMITGYAQH 688
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 237/458 (51%), Gaps = 57/458 (12%)
Query: 200 KAVFDGMRLKN----------VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
K + DG R+ N + WN+++S++ G + A+ FD+M ++DV +WN ++
Sbjct: 118 KNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLL 177
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GY Q+ EA + M++D +KPDK+T L+ACA+ + + G ++ + I+ +
Sbjct: 178 GGYVQHRRYEEAFRLHEQMVQD-GVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGW 236
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
D VG ALI+ + K GGV+ A K +F
Sbjct: 237 DTDLFVGTALINMHIKCGGVDDALK---------------------------------VF 263
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
++L RD++ WT+M+ G ++ K A LF+ M EG +P+ ++L + +L+
Sbjct: 264 NNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALE 323
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
GK++HA G + + V AL++MY+K G++ A VFNL+ R VSWT+MI
Sbjct: 324 QGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRN-VVSWTAMIAGF 382
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQHG EEA F +M+E GI+P+ +T++ +L AC+ ++QG++ ++ + I
Sbjct: 383 AQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDD 442
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
A ++ + + G L +A N E + + +VVAW ++++A H+ D +A + L
Sbjct: 443 RVRTA-LLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYD-NAVATFQAL 499
Query: 610 L---IEPDNSGAYSALCNLYSS-----CGKWEDAANIR 639
L I+PD+S ++++ N+ S GKW + IR
Sbjct: 500 LKEGIKPDSS-TFTSILNVCKSPDALELGKWVQSLIIR 536
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 63/267 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK V + II+ G + ++N+L++ + + A +F++MP + L SWNTI++ +
Sbjct: 526 LGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFV 585
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G A + F +M + V P Q T T
Sbjct: 586 QHGENQFAFDYFKMMQ-------------------------------ESGVKPDQITFTG 614
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C + L+ G+++H+ + + L V V L++MY K G A VF + KN
Sbjct: 615 LLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKN 674
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SW SMI GY+Q+G EAL +F M +
Sbjct: 675 VYSW-------------------------------TSMITGYAQHGRGKEALELFCQM-Q 702
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLG 297
+KPD T LSACA+ +K G
Sbjct: 703 QEGVKPDWITFVGALSACAHAGLIKEG 729
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 35/259 (13%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T S++L + +L G++IH S + + N LI+MY+K GN N+A+++F+ +
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
++ SW ++ QH EEA +L E+M++ G+KPD T+V +L AC V++G
Sbjct: 166 P-DKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Query: 534 QRYYNMMKN--------------------------VHKIKPTPSH----FASMVDLLGRA 563
++++ N + P + SM+ L R
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 564 GLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS-GAY 619
++A N + M ++PD VA+ SLL AC + L+ GK ++ + D
Sbjct: 285 RQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVG 344
Query: 620 SALCNLYSSCGKWEDAANI 638
+AL ++Y+ CG EDA +
Sbjct: 345 TALLSMYTKCGSMEDALEV 363
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/754 (36%), Positives = 418/754 (55%), Gaps = 97/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H+ ++K G+ L ++ SL++ Y K+
Sbjct: 263 GKQLHSYLLKAGMSLDYIMEGSLLDLYVKS------------------------------ 292
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++ A ++F+ + V W ++V Y +I + +F M+ V P +FT +
Sbjct: 293 -GDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCM 351
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT G++ G+++HS +K G + V+ L++MY+K G
Sbjct: 352 LRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYG----------------- 394
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
W LD A+ D + E+DVV+W SMIAGY Q+ + EAL F M +
Sbjct: 395 --W------------LDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM-QA 439
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ PD LAS +SACA ++ + G QIHA + + + A + N L+ YA+ G
Sbjct: 440 CGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCG---- 495
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
++ AF++ F+++ ++ + W ++ G+ Q+G
Sbjct: 496 ------------ISKEAFSS-----------------FEAIEHKEGITWNGLISGFAQSG 526
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L ++A+++F M + G K N +T + +S S++LA + GKQIHA +++G S +SN
Sbjct: 527 LYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISN 586
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
ALI++Y K G+I A+ F + R E VSW ++I +QHG G EA+ LF++M + G+K
Sbjct: 587 ALISLYGKCGSIEDAKMDFFEMTKRNE-VSWNTIITCCSQHGRGLEALDLFDQMKQQGLK 645
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P +T+VGVLTAC+H GLVE+G Y+ M N H I P P H+A +VD+LGRAG L A
Sbjct: 646 PSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKR 705
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
F+E MP+ D + W +LLSAC+VHKNL++G+ AA+ LL +EP +S +Y L N Y+ GK
Sbjct: 706 FVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGK 765
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W IRK MK GV+K G SW++++N VH F V D LHP D IYN ++ + D + +
Sbjct: 766 WASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYK 825
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+ + + H+ E++ K+ HSEKLA+AFGL+S P LR++KNLRVCNDCH+
Sbjct: 826 IGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTW 885
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KF ++ REIV+RD RFHHF G CSC DYW
Sbjct: 886 MKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 170/582 (29%), Positives = 283/582 (48%), Gaps = 76/582 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK+G + A VF + RD+VSW ++ Y + G + A+R++ EM + V+
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + ++S+L++CT G+ +H V K G V N+L+++Y
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLY------------ 188
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+R ++ LA F M+ D VT+N++I+G++Q G+ AL
Sbjct: 189 ---LRCRS----------------FRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRAL 229
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G+F M + S L PD T+AS L+AC+ + L+ GKQ+H+Y+++
Sbjct: 230 GIFDEM-QLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLK---------------- 272
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+G+S L+ I +LLD Y+K GDI A +IFDS +VV W
Sbjct: 273 ----------------AGMS-LDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNL 315
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
MLV Y Q + ++F M+ G +PN +T ML + + G+QIH+ +++G
Sbjct: 316 MLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNG 375
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + VS LI MYSK G ++ A+R+ ++I ++ VSWTSMI QH +EA++ F
Sbjct: 376 FQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE-EKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M GI PD+I ++AC V QG + + + V S + +V L R
Sbjct: 435 KEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY-VSGYSADVSIWNGLVYLYAR 493
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL-LLIEPDNSGAYSA 621
G+ +EA++ E + + + W L+S + E L + ++ D +GA
Sbjct: 494 CGISKEAFSSFEAIE-HKEGITWNGLISG------FAQSGLYEEALKVFMKMDQAGAKYN 546
Query: 622 LCNLYSSCGKWEDAANIRKSMK-YVGVKKTQGFSWVQIQNKV 662
+ SS + A+I++ + + V KT S +I N +
Sbjct: 547 VFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNAL 588
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 216/460 (46%), Gaps = 72/460 (15%)
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
++H+ + GLSG + N L+++YAK G A+ VF+ + ++
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVR---------------- 106
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
D V+W ++++GY+QNG EA+ ++ M + S + P + L+S L
Sbjct: 107 ---------------DNVSWVAVLSGYAQNGLGEEAVRLYREMHR-SGVVPTPYVLSSIL 150
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SAC E +LG+ IH + + F + VGNALIS Y + +A ++ + Y +
Sbjct: 151 SACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVF--CDMLYCD 208
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
+ F TL+ G+ + G A IFD M
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFD-------------------------------EMQL 237
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G P++ T++++L+ S++ L GKQ+H+ L++G + + +L+ +Y K+G+I
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEE 297
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A ++F+ R V W M+VA Q ++ +F RML G++P+ TY +L CT
Sbjct: 298 ALQIFDSGD-RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCT 356
Query: 526 HGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
H G + G++ +++ +KN + S ++D+ + G L +A + +M E DVV+
Sbjct: 357 HTGEIGLGEQIHSLTIKNGFQSDMYVS--GVLIDMYSKYGWLDKAQRIL-DMIEEKDVVS 413
Query: 585 WGSLLSACRVHKNLD--LGKIAAEKLLLIEPDNSGAYSAL 622
W S+++ H+ L + I PDN G SA+
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAI 453
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 103/245 (42%), Gaps = 39/245 (15%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IHA A+ G + + N LI +Y+K G + ARRVF + R + VSW +++ AQ+
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVR-DNVSWVAVLSGYAQN 121
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ------------------ 534
GLGEEA++L+ M G+ P +L+ACT L + G+
Sbjct: 122 GLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVG 181
Query: 535 ----------RYYNMMKNVH--KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP---LE 579
R + + V + F +++ + G A + M L
Sbjct: 182 NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLS 241
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY---SALCNLYSSCGKWEDAA 636
PD V SLL+AC +L GK LL + S Y +L +LY G E+A
Sbjct: 242 PDSVTIASLLAACSAVGDLRKGKQLHSYLL--KAGMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 637 NIRKS 641
I S
Sbjct: 300 QIFDS 304
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/770 (35%), Positives = 415/770 (53%), Gaps = 98/770 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +LLQ + ++ + G+ +H +I G ++F +++N YAK I A K+F+
Sbjct: 145 FTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFER-- 202
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
MP RD VSW T++ Y + G + A+++ ++
Sbjct: 203 -----------------------------MPQRDLVSWNTVVAGYAQNGFARRAVQVVLQ 233
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + P T+ SVL + L L G+ +H + + G VNV ++L+ Y K G
Sbjct: 234 MQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS 293
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF GM R+VV+WN+MI GY+QN
Sbjct: 294 VRSARLVFKGMS-------------------------------SRNVVSWNTMIDGYAQN 322
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA F ML D ++P ++ L ACANL L+ G+ +H + + V
Sbjct: 323 GESEEAFATFLKML-DEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSV 381
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LIS Y+K V+IA + F +L+ +
Sbjct: 382 MNSLISMYSKCKRVDIAASV---------------------------------FGNLKHK 408
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
VV W AM++GY QNG +A+ LF M KP+++TL ++++ + L+ K IH
Sbjct: 409 TVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A+R+ ++ V ALI ++K G I AR++F+L+ R ++W +MI +G G
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERH-VITWNAMIDGYGTNGHG 527
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA+ LF M +KP+ IT++ V+ AC+H GLVE+G Y+ MK + ++PT H+ +
Sbjct: 528 REALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGA 587
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDLLGRAG L +A+ FI++MP++P + G++L ACR+HKN++LG+ A++L ++PD+
Sbjct: 588 MVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDD 647
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G + L N+Y+S W+ A +R +M+ G++KT G S V+++N+VH F HPQ
Sbjct: 648 GGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQS 707
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY + + DE+K G+VPDT S+ HDVEEDVKEQ+L HSE+LAIAFGL++T T
Sbjct: 708 KRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTA 766
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ I KNLRVC DCH A K+I + REI+VRD RFHHFK G+CSC DYW
Sbjct: 767 IHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 145/338 (42%), Gaps = 53/338 (15%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T L+ + K I A R+F+ + + V + ML GY +N +DAV + M +
Sbjct: 80 TKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVM 139
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P Y + +L +S L G++IH + +G S+L A++ +Y+K I A ++
Sbjct: 140 PVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKM 199
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT---- 525
F + R + VSW +++ AQ+G A+Q+ +M E G KPD IT V VL A
Sbjct: 200 FERMPQR-DLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKA 258
Query: 526 -------HGGLVEQGQRYY-----NMMKNVHKIKPTPS--------------HFASMVDL 559
HG G Y M+ K S + +M+D
Sbjct: 259 LRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDG 318
Query: 560 LGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACR----------VHKNLDLGKIAAE 606
+ G +EA+ M +EP V+ L AC VH+ LD KI +
Sbjct: 319 YAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD 378
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
++ ++L ++YS C + + AA++ ++K+
Sbjct: 379 VSVM---------NSLISMYSKCKRVDIAASVFGNLKH 407
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 286/778 (36%), Positives = 440/778 (56%), Gaps = 70/778 (8%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L+ + +L+S + +++ GK +H +K + S +L N + Y+K ++ A F+
Sbjct: 8 LQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFN 67
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
+ + S+N +++AYAK+ + +A +F+ +P D VS+ T+I Y + G +A+ +
Sbjct: 68 QTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F EM + ++ FT + V+ +C + +++HS +G V+V NSLL Y+K
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSK 185
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G A+ VF+GM + RD V+WNSMI Y
Sbjct: 186 NGILEEAEMVFNGMGEE-----------------------------VRDEVSWNSMIVAY 216
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
Q+ +AL ++ +M+ + D FTLAS L+ + +E L G Q HA I+T F+
Sbjct: 217 GQHKRGLKALALYRDMVH-RGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKN 275
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
VG+ LI YAK G +G+S +R++F+ +
Sbjct: 276 RHVGSGLIDMYAKCG-----------AGMS---------------------ESRKVFEEI 303
Query: 373 RDRDVVAWTAMLVGYEQNG-LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
D+V W M+ GY QN L+ +A+E FR M R G P++ + +S S+L+S G
Sbjct: 304 CGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQG 363
Query: 432 KQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
KQ HA A++S ++ +SV+NAL+TMYSK GN+ AR++F + + TV+ S+I A
Sbjct: 364 KQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP-QHNTVTLNSIIAGYA 422
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
QHG+G E++ LFE+ML I P IT V +L+AC H G VE+G++Y+NMMK++ I+P
Sbjct: 423 QHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEA 482
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H++ M+DLLGRAG L EA I+ MP P AW +LL ACR + N++L + AA + L
Sbjct: 483 EHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQ 542
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EP N+ Y L ++YS+ KWE+AA IRK M+ G++K G SW+++ +VHVF ED
Sbjct: 543 LEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDN 602
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTA-SVLHDVE--EDVKEQMLRHHSEKLAIAFGL 727
HP+ I+ + +++ ++K G+VPD + + D E E KE ML HHSEKLA+AFGL
Sbjct: 603 SHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGL 662
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ T L ++KNLR+C DCH+AIKF+ + R+I VRDA RFH F+ G CSC DYW
Sbjct: 663 LFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/545 (25%), Positives = 248/545 (45%), Gaps = 80/545 (14%)
Query: 144 TQFTVT-----SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
TQF+ T +L SC A DL GK +H+ +K+ + ++N + +Y+K
Sbjct: 2 TQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTT 61
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A F+ NV S+N +++ + + +A FDQ+ + D+V++N++I Y+ G
Sbjct: 62 AHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDT 121
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
AL +F M ++ L D FT + ++AC N + L +Q+H+ + FD+ V N+
Sbjct: 122 LSALSLFGEM-REMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNS 178
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L++ Y+K G +E A+ + G RD V
Sbjct: 179 LLTYYSKNGILEEAEMVFNGMGEEV-------------------------------RDEV 207
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W +M+V Y Q+ A+ L+R MV G + + +TL+++L+ S + L G Q HA A
Sbjct: 208 SWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKA 267
Query: 439 LRSGEASSLSVSNALITMYSKAG-NINAARRVFNLIHWRQETVSWTSMIVALAQHG-LGE 496
+++G + V + LI MY+K G ++ +R+VF I + V W +MI +Q+ L
Sbjct: 268 IKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEI-CGSDLVVWNTMISGYSQNKELSV 326
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA++ F +M G PD ++V ++AC++ QG++++ + S ++
Sbjct: 327 EALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNAL 386
Query: 557 VDLLGRAGLLQEAYNFIENMP----------------------------------LEPDV 582
V + + G LQ+A + MP + P
Sbjct: 387 VTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTS 446
Query: 583 VAWGSLLSACRVHKNLDLGKI---AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
+ S+LSAC ++ GK + + IEP+ + YS + +L GK +A +
Sbjct: 447 ITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPE-AEHYSCMIDLLGRAGKLSEAERLI 505
Query: 640 KSMKY 644
+M +
Sbjct: 506 DTMPF 510
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/770 (36%), Positives = 422/770 (54%), Gaps = 99/770 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA LLQ ++ + G+ +H II G ++F+ ++M+ YAK I A K+F+ M
Sbjct: 148 YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQ 207
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K L SW T+++ YA+ G K A+++ ++
Sbjct: 208 HKDLVSWTTLVAGYAQNGHA-------------------------------KRALQLVLQ 236
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + P T+ S+L + + L G+ +H + ++G VNVTN+LL+MY K G
Sbjct: 237 MQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGS 296
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A+ VF GMR K V SW N+MI G +QN
Sbjct: 297 ARIARLVFKGMRSKTVVSW-------------------------------NTMIDGCAQN 325
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA F ML + + P + T+ L ACANL L+ G +H + + + D+ V
Sbjct: 326 GESEEAFATFLKMLDEGEV-PTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSV 384
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LIS Y+K V+IA IF++L ++
Sbjct: 385 MNSLISMYSKCKRVDIAAS---------------------------------IFNNL-EK 410
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
V W AM++GY QNG K+A+ LF M +G K + +TL +++ + + K IH
Sbjct: 411 TNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIH 470
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A+R+ +++ VS AL+ MY+K G I AR++F+++ R ++W +MI HG+G
Sbjct: 471 GLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERH-VITWNAMIDGYGTHGVG 529
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+E + LF M + +KP+ IT++ V++AC+H G VE+G + M+ + ++PT H+++
Sbjct: 530 KETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSA 589
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDLLGRAG L +A+NFI+ MP++P + G++L AC++HKN++LG+ AA+KL ++PD
Sbjct: 590 MVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDE 649
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G + L N+Y+S W+ A +R +M+ G+ KT G SWV+++N++H F HP+
Sbjct: 650 GGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPES 709
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY + + DEIK G+VPD S+ HDVEEDVK+Q+L HSE+LAIAFGL++T TT
Sbjct: 710 KKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTT 768
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L I KNLRVC DCH K+I + REI+VRD RFHHFK G CSC DYW
Sbjct: 769 LHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 41/335 (12%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T ++ + K G A R+F+ + + V + ML GY +N DA+ F M+ + +
Sbjct: 83 TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
+ +L + L G++IH + +G S+L V A++++Y+K I+ A ++
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT---- 525
F + ++ VSWT+++ AQ+G + A+QL +M E G KPD +T V +L A
Sbjct: 203 FERMQ-HKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261
Query: 526 -------HGGLVEQGQRYYNMMKNVHKI----------------------KPTPSHFASM 556
HG G + + NV T + +M
Sbjct: 262 LRIGRSIHGYAFRSG---FESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTM 318
Query: 557 VDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
+D + G +EA+ M E P V +L AC +L+ G + L ++
Sbjct: 319 IDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKL 378
Query: 614 D-NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
D N ++L ++YS C + + AA+I +++ V
Sbjct: 379 DSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV 413
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/704 (37%), Positives = 413/704 (58%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT++ +Y K RLDLAC++F MP DSVS+ +I Y++ G + A+ +FVEM +
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT+FT +VL + L D+ G+++HSFV+KT V V+N+LL+ Y+K
Sbjct: 248 PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSK---------- 297
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
H +D AR FD+M E+D V++N +I+GY+ +G A
Sbjct: 298 --------------------HDSVID-ARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAF 336
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F L+ ++ +F A+ LS +N ++G+QIHA I T D+ VGN+L+
Sbjct: 337 DLFRE-LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDM 395
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA K G A IF +L R V WTA
Sbjct: 396 YA---------------------------------KCGKFEEAEMIFTNLTHRSAVPWTA 422
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y Q G ++ ++LF M + + T +++L S+S+ASL GKQ+H+ ++SG
Sbjct: 423 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 482
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ +AL+ +Y+K G+I A + F + R VSW +MI A AQ+G E ++ F
Sbjct: 483 FMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRN-IVSWNAMISAYAQNGEAEATLKSF 541
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M+ G++PD ++++GVL+AC+H GLVE+G ++N M ++K+ P H+AS+VD+L R
Sbjct: 542 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCR 601
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSA 621
+G EA + MP++PD + W S+L+ACR+HKN +L + AA++L +E ++ Y
Sbjct: 602 SGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVN 661
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
+ N+Y++ G+WE+ + + K+M+ GVKK +SWV+I+++ H+F D HPQ + I K
Sbjct: 662 MSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKK 721
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + ++E+G+ PDT+ LH+ +E K + L++HSE+LAIAF LISTPE + + +MKN
Sbjct: 722 IDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKN 781
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR C DCH+AIK I K+V REI VRD+TRFHHF+ G CSC D+W
Sbjct: 782 LRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/558 (28%), Positives = 277/558 (49%), Gaps = 70/558 (12%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+ ARI+K G N + + K +S A+++F++MP K S N ++S Y K G
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A ++F+ M R +V+WT +I Y+++ +FK A +FV+M + P T ++L+
Sbjct: 99 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C + +V + ++K G + V N+L++ Y K
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK---------------------- 196
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
S RLDLA F +M E D V++N+MI GYS++G D +A+ +F M ++S L
Sbjct: 197 ---------SNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM-QNSGL 246
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
KP +FT A+ L A L+ + LG+QIH+++I+T F V NAL+ Y+K V A+K
Sbjct: 247 KPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARK 306
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+FD + ++D V++ ++ GY +G +K
Sbjct: 307 ---------------------------------LFDEMPEQDGVSYNVIISGYAWDGKHK 333
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
A +LFR + + + MLS++S+ + G+QIHA + + S + V N+L+
Sbjct: 334 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLV 393
Query: 455 TMYSKAGNINAARRVF-NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
MY+K G A +F NL H + V WT+MI A Q G EE +QLF +M + + D
Sbjct: 394 DMYAKCGKFEEAEMIFTNLTH--RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIAD 451
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
T+ +L A + G++ ++ + + S ++++D+ + G +++A
Sbjct: 452 QATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQTF 510
Query: 574 ENMPLEPDVVAWGSLLSA 591
+ MP + ++V+W +++SA
Sbjct: 511 QEMP-DRNIVSWNAMISA 527
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 163/353 (46%), Gaps = 75/353 (21%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S + P EF +A +L +N+ + +G+ +H+ +IK +VF+ N+L++FY+K +S+
Sbjct: 244 SGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVID 303
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN-----------------LMPNRD 109
A+K+FDEMP + S+N I+S YA G+ A ++F L +
Sbjct: 304 ARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASN 363
Query: 110 SVSW--------TTIIVT--------------YNEIGRFKNA------------------ 129
++ W TI+ T Y + G+F+ A
Sbjct: 364 TLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAM 423
Query: 130 -------------IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
+++F +M Q V+ Q T S+L + ++ LS GK++HSF++K+G
Sbjct: 424 ISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGF 483
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
V ++LL++YAK G A F M +N+ SWN ++S + +G + F +
Sbjct: 484 MSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKE 543
Query: 237 MI----ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
M+ + D V++ +++ S +G E L F +M + L P + AS +
Sbjct: 544 MVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVV 596
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/783 (34%), Positives = 429/783 (54%), Gaps = 68/783 (8%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
IS F H N + +G VH RI+KCG + L N+LM Y+K
Sbjct: 133 ISTFHFLIHACCKNFDVK---LGSEVHGRILKCGFGRNKSLNNNLMGLYSKC-------- 181
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
G+L C++F M +RD +SW T+I Y G ++ A
Sbjct: 182 -----------------------GKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREA 218
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ +F EM+ VLP + T+ S++++C L DL GK++H ++V L ++ N L++M
Sbjct: 219 LDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDM 278
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSS--WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
Y+K G A + V W +VS ++ S ++D AR FD+M ER +V+W +
Sbjct: 279 YSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTT 338
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M++GY Q GY E+L +F M + ++ PD+ L + LSAC +LE LG+ +HA+I+
Sbjct: 339 MMSGYVQGGYYCESLELFQQM-RFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTY 397
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
G +GNAL+ YAK G ++ A + EQ + + ++ ++LDG+ + G + AR
Sbjct: 398 GMLVDGFLGNALLDLYAKCGKLDEALRTFEQ--LPCKSAASWNSMLDGFCRSGGVDKARD 455
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F+ + ++D+V+W M+ Y ++ L ++ E+F M KP+ TL ++LS + + +
Sbjct: 456 FFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGA 515
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+HG ++ ++ + ALI MY K G + A +F I + WT+M+
Sbjct: 516 LNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMA 574
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A A G EAI L+ M E G+KPDH+T++ +L AC+HGGLV++G +Y+N +++ + I
Sbjct: 575 AYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNII 634
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
PT H+ MVDLLGR G L+E FIE MP+EPDV W SL+ ACR H N++L + A ++
Sbjct: 635 PTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQ 694
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L+ I+P N+GA+ L N+Y+ G+W+D + +R + GV K GF+ ++ VH F
Sbjct: 695 LIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVA 754
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED--VKEQM---LRHHSEKLA 722
+ + D +L D+E VK+++ HSE+LA
Sbjct: 755 SNLVSA-----------------------DILCMLQDIERRLLVKQELSDTTSQHSERLA 791
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
+AFGLI+ EN+ +R++ ++R+C DCHS +K I + DREIV+RD RFH F G CSC+
Sbjct: 792 VAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCK 851
Query: 783 DYW 785
DYW
Sbjct: 852 DYW 854
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 252/537 (46%), Gaps = 64/537 (11%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+L+ LD A ++ + +S+ W T++ + G + + + MV VL
Sbjct: 73 VLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLD 132
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T ++ +C D+ G +VH ++K G ++ N+L+ +Y+K G +F+
Sbjct: 133 ISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFE 192
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M ++V SWN ++S ++ G A FD+M+ V+
Sbjct: 193 KMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVL--------------------- 231
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
PD+ T+ S +S CA L+ L++GK++H YI+ + G + N L+ Y+
Sbjct: 232 -----------PDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYS 280
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G ++ A ++ + S ++V+ +TTL+ GY+K I AR++FD + +R +V+WT M+
Sbjct: 281 KCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMM 340
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY Q G +++ELF+ M E P+ L +LS L D G+ +HA + G
Sbjct: 341 SGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGML 400
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLI------HW----------------------- 475
+ NAL+ +Y+K G ++ A R F + W
Sbjct: 401 VDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKI 460
Query: 476 -RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
++ VSW +M+ A +H L E+ ++F +M +KPD T + +L++C G + G
Sbjct: 461 PEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGI 520
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ N+ ++I +++D+ G+ G ++ AY + +E +V W ++++A
Sbjct: 521 -WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 284/756 (37%), Positives = 437/756 (57%), Gaps = 56/756 (7%)
Query: 34 LVHARIIKCGLHLSVFL--KNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
L+ R++ + S F+ +NSL+ Y++ I A+ VFDEM K + SWN+I++ Y +
Sbjct: 82 LMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQ 141
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R A +F+ M R+++SW ++ Y G A +F M + V+
Sbjct: 142 NKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV--------- 192
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
S TA+ + Y K G A+ +F M KNV
Sbjct: 193 --SWTAM----------------------------VRGYVKEGMISEAETLFWQMPEKNV 222
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW V++ + GR+D A FD M E+DVVT +MI GY Q G EA ML D
Sbjct: 223 VSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEA-----RMLFD 277
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVE 330
+ + + + ++ +++ + +++ + + E T A++ Y G ++
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWT-----AMLKGYTNCGRLD 332
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A ++ I +V+A ++ + + G++ AR++FD +R++D W+AM+ YE+
Sbjct: 333 EASELFNAMPIK--SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERK 390
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
GL DA+ELFR M REG +PN +L ++LSV + LA+LDHG++IHA +RS + V+
Sbjct: 391 GLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVA 450
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ L++MY K GN+ A++VF+ + + V W S+I AQHGLG EA+++F M GI
Sbjct: 451 SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGI 509
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
PD +T+VGVL+AC++ G V++G +N M+ ++++ H+A MVDLLGRAG L EA
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+ IE MP+E D + WG+LL ACR H LDL ++AA+KLL++EP N+G + L N+Y+S G
Sbjct: 570 DLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQG 629
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEI 689
+W+D A +R++M+ V K G SW+ ++ KVH F G + HP+ I + + +
Sbjct: 630 RWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLL 689
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+E G+ PD + VLHDV+E+ K Q L +HSEKLA+A+GL+ P +R+MKNLRVC DCH
Sbjct: 690 REAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCH 749
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+AIK I K+ REI++RDA RFHHFK G CSCRDYW
Sbjct: 750 AAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/736 (37%), Positives = 428/736 (58%), Gaps = 52/736 (7%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N+ + A+ +I A+ F+ MP++T S+N +L+ Y + D A +F MP+RD
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
S+ +I + ++ Q LP + AL + V SF
Sbjct: 81 SYNALISGLS---------------LRRQTLPD---------AAAALASIPFPPSVVSF- 115
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
SLL Y + G A +F M +N S+ V++ + +GR++ AR
Sbjct: 116 ------------TSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEAR 163
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M +RDVV W +M++GY Q G EA +F M K + + + + +S A
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV-----SWTAMISGYAQN 218
Query: 292 EKLKLGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ L +++ + R E T A++ Y + G VE A ++ + + V A
Sbjct: 219 GEVNLARKLFEVMPERNEVSWT-----AMLVGYIQAGHVEDAAELF--NAMPEHPVAACN 271
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
++ G+ + G + A+ +F+ +R+RD W+AM+ YEQN +A+ FR M+ G +P
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
N ++ ++L+V ++LA LD+G+++HA+ LR + +ALITMY K GN++ A+RVF
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ ++ V W SMI AQHGLGE+A+ +F M G+ PD ITY+G LTAC++ G V
Sbjct: 392 HTFE-PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV 450
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
++G+ +N M I+P H++ MVDLLGR+GL++EA++ I+NMP+EPD V WG+L+
Sbjct: 451 KEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMG 510
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
ACR+H+N ++ ++AA+KLL +EP N+G Y L ++Y+S G+WEDA+ +RK + + K+
Sbjct: 511 ACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKS 570
Query: 651 QGFSWVQIQNKVHVFGVEDWL-HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G SW++ +VH+F D L HP+ AI + K+ + E G+ D + VLHD++E+
Sbjct: 571 PGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQ 630
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
K LR+HSE+ A+A+GL+ PE +R+MKNLRVC DCHSAIK I K+ REIV+RDA
Sbjct: 631 KSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDAN 690
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHFK G CSCRDYW
Sbjct: 691 RFHHFKDGFCSCRDYW 706
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 221/478 (46%), Gaps = 76/478 (15%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV SL+ Y + ++ A ++F +MP + S+ +L GR++ A +F+ MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+RD V+WT ++ Y + GR A +F EM + V+ + T++++ G+++ +K
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV----SWTAMISGYAQNGEVNLARK 226
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+ + + V+ T L+ Y + G A +F+ M V++ N ++ G
Sbjct: 227 LFEVMPERNE---VSWTAMLVG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+D A+ F++M ERD TW++MI Y QN + EAL F ML ++P+ ++ S L+
Sbjct: 283 VDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLW-RGVRPNYPSVISILT 341
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
CA L L G+++HA ++R FD +ALI+ Y
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY----------------------- 378
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
IK G++ A+R+F + +D+V W +M+ GY Q+GL + A+ +F M
Sbjct: 379 ----------IKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLA 428
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G P+ T L+ S + G++I +S++V++++
Sbjct: 429 GMSPDGITYIGALTACSYTGKVKEGREIF---------NSMTVNSSI------------- 466
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
R ++ M+ L + GL EEA L + M ++PD + + ++ AC
Sbjct: 467 ---------RPGAEHYSCMVDLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGAC 512
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN PS+IS L A L + G+ VHA +++C + VF ++L+ Y K +
Sbjct: 331 PNYPSVISILTVCAALAVLDY-------GREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTIIVT 119
+ AK+VF K + WN++++ YA+ G + A +F+ M + D +++ +
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443
Query: 120 YNEIGRFKNAIRMFVEM-VQDQVLP 143
+ G+ K +F M V + P
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRP 468
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/734 (36%), Positives = 433/734 (58%), Gaps = 47/734 (6%)
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+L++ + + ++ A ++F + T+ N++L+ Y K +D A E+F+ MP RD VS
Sbjct: 178 ALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVS 237
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++ ++ GR + A+ M V+M V T TS L +C L L GK++H+ V+
Sbjct: 238 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
+ V ++L+ +YAK G AK VF+ SLH
Sbjct: 298 RNLPHIDPYVASALVELYAKSGCFKEAKGVFN--------------SLH----------- 332
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
+R+ V W +I+G+ Q G E++ +F N ++ + D+F LA+ +S C +
Sbjct: 333 ------DRNNVAWTVLISGFLQYGCFTESVELF-NQMRAELMTLDQFALATLISGCCSRM 385
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L LG+Q+H+ +++ V N+LIS YAK ++ A+ I ++ +++++T++
Sbjct: 386 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRF--MNEKDIVSWTSM 443
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG-PKPN 411
+ Y ++G++ AR FD + +++V+ W AML Y Q+G +D + +++ M+ E +P+
Sbjct: 444 ITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPD 503
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
T + + L + G QI ++ G SV+NA+ITMYSK G I AR+VF+
Sbjct: 504 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFD 563
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
++ + + VSW +MI +QHG+G++AI++F+ +L+ G KPD+I+YV VL+ C+H GLV+
Sbjct: 564 FLNVK-DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+G+ Y++MMK H I P HF+ MVDLLGRAG L EA + I++MP++P WG+LLSA
Sbjct: 623 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 682
Query: 592 CRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQ 651
C++H N +L ++AA+ + ++ +SG+Y + +Y+ GK +D+A IRK M+ G+KK
Sbjct: 683 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 742
Query: 652 GFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKE 711
G+SW+++ NKVHVF +D HPQ AI K+ ++ ++I +G+V T S ++
Sbjct: 743 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR-TDSTRSEI------ 795
Query: 712 QMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRF 771
HHSEKLA+AFGL++ P + IMKNLR+C DCH+ IK I + RE V+RDA RF
Sbjct: 796 ----HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRF 851
Query: 772 HHFKKGLCSCRDYW 785
HHF G CSC DYW
Sbjct: 852 HHFNGGSCSCGDYW 865
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 191/668 (28%), Positives = 319/668 (47%), Gaps = 90/668 (13%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF-DEMPVKTLCSWNTILSAYAKQGR 94
H R++ GL +VFL+N+L++ Y ++S A+++ ++ + + N +L+ YAK GR
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLA 153
L A E+F MP RD SW T++ Y + ++ ++ F+ M + P FT+ +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC ALG S ++ + V K V +L++M+ + G +A +F ++ +
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
N +++ ++ + +D A FD M ERDVV+WN M++ SQ+G EAL M +M +
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QSKG 265
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
++ D T S+L+ACA L L+ GKQ+HA +IR V +AL+ YAK G + A+
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 325
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ F+SL DR+ VAWT ++ G+ Q G
Sbjct: 326 GV---------------------------------FNSLHDRNNVAWTVLISGFLQYGCF 352
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
++VELF M E + + L+ ++S S L G+Q+H+ L+SG+ ++ VSN+L
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 412
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I+MY+K N+ +A +F ++ ++ VSWTSMI A +Q G +A + F+ M E +
Sbjct: 413 ISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV--- 468
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
IT+ +L A G E G R Y +M L E Y
Sbjct: 469 -ITWNAMLGAYIQHGAEEDGLRMYKVM-------------------------LSEEY--- 499
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
+ PD V + +L C LG +I + + ++ +A+ +YS CG+
Sbjct: 500 ----VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRI 555
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+A RK ++ VK ++ + H G + AI +I+D+I +
Sbjct: 556 LEA---RKVFDFLNVKDIVSWNAMITGYSQHGMG--------KQAI-----EIFDDILKR 599
Query: 693 GFVPDTAS 700
G PD S
Sbjct: 600 GAKPDYIS 607
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 251/528 (47%), Gaps = 67/528 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA++I+ H+ ++ ++L+ YAK+ AK VF+ + + +W ++S + +
Sbjct: 289 GKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 348
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G C F ++ +F +M + + QF + ++
Sbjct: 349 YG-----C--------------------------FTESVELFNQMRAELMTLDQFALATL 377
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
++ C + DL G+++HS +K+G V V+NSL++MYAK + A+A+F M K++
Sbjct: 378 ISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDI 437
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW +++ + G + AR FD M E++V+TWN+M+ Y Q+G + + L M+ ML +
Sbjct: 438 VSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSE 497
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++PD T + CA+L KLG QI ++ V NA+I+ Y+K G
Sbjct: 498 EYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCG---- 553
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+I+E AR++FD L +D+V+W AM+ GY Q+G
Sbjct: 554 --RILE---------------------------ARKVFDFLNVKDIVSWNAMITGYSQHG 584
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVS 450
+ K A+E+F +++ G KP+ + A+LS S + GK R+ S L
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF 644
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ ++ + +AG++ A+ + + + + W +++ A HG E A + + EL
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELD- 703
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
PD +Y+ + G + + +M++ IK P + VD
Sbjct: 704 SPDSGSYMLMAKIYADAGKSDDSAQIRKLMRD-KGIKKNPGYSWMEVD 750
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 246/500 (49%), Gaps = 25/500 (5%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL--- 208
L SC A G L+ + +H +V GL+ V + N+LL+ Y G A+ D RL
Sbjct: 11 LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCG------ALSDARRLLLM 64
Query: 209 ----KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
NV + NV+++ + GRL A F +M RDV +WN++++GY Q+ +L
Sbjct: 65 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 124
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F +M + P+ FTLA + +C L L Q+ A + + + V AL+ +
Sbjct: 125 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 184
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ G V++A ++ + I + ++L GY+K + A +FDS+ +RDVV+W M+
Sbjct: 185 RCGAVDLASRLFVR--IKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMV 242
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Q+G ++A+++ M +G + ++ T ++ L+ + L+SL GKQ+HA +R+
Sbjct: 243 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPH 302
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
V++AL+ +Y+K+G A+ VFN +H R V+WT +I Q+G E+++LF +
Sbjct: 303 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRN-NVAWTVLISGFLQYGCFTESVELFNQ 361
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + D +++ C + G++ +++ +I+ S++ + +
Sbjct: 362 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCD 420
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSAL 622
LQ A M E D+V+W S+++A +G +A + + N ++A+
Sbjct: 421 NLQSAEAIFRFMN-EKDIVSWTSMITAYS-----QVGNVAKAREFFDGMSEKNVITWNAM 474
Query: 623 CNLYSSCGKWEDAANIRKSM 642
Y G ED + K M
Sbjct: 475 LGAYIQHGAEEDGLRMYKVM 494
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 140/269 (52%), Gaps = 33/269 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H+ +K G +V + NSL++ YAK +++ A+ +F M K + SW ++++AY+
Sbjct: 389 LGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYS 448
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTVT 149
+ G + A E F+ M ++ ++W ++ Y + G ++ +RM+ M+ ++ V P T
Sbjct: 449 QVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYV 508
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C LG G ++ VK GL +V N+++ MY+K G + A+ VFD + +K
Sbjct: 509 TLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVK 568
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ SW N+MI GYSQ+G +A+ +F ++L
Sbjct: 569 DIVSW-------------------------------NAMITGYSQHGMGKQAIEIFDDIL 597
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGK 298
K + KPD + + LS C++ ++ GK
Sbjct: 598 KRGA-KPDYISYVAVLSGCSHSGLVQEGK 625
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/772 (35%), Positives = 431/772 (55%), Gaps = 70/772 (9%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L + KS G VH I+K G +F++NSL++FY +
Sbjct: 142 FPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGEC-------------- 187
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
G +D VF+ M R+ VSWT++I Y + G +K A+ +F E
Sbjct: 188 -----------------GEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFE 230
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
MV+ + P T+ V+++C L DL G++V + + + L + N+L++MY K G
Sbjct: 231 MVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCG- 289
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+D AR FD+ +++++V +N++++ Y +
Sbjct: 290 ------------------------------AIDKARKIFDECVDKNLVLYNTIMSNYVRQ 319
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G E L + MLK +PD+ T+ S +SAC+ L+ + GK H Y++R + V
Sbjct: 320 GLAREVLAVLGEMLKHGP-RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNV 378
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNV--IAFTTLLDGYIKIGDIGPARRIFDSLR 373
NA+I+ Y K G E+A ++ ++ LN +++ +L+ G+++ GD+ A +IF ++
Sbjct: 379 CNAIINMYMKCGKQEMACRVFDR----MLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMP 434
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D D+V+W M+ Q + K+A+ELFR M EG + T+ + S L +LD K
Sbjct: 435 DSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKW 494
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IH + + + AL+ M+++ G+ +A +VFN + +++ +WT+ I A+A G
Sbjct: 495 IHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEG 553
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G AI+LF+ ML+ GIKPD + +V +LTA +HGGLVEQG + MK+++ I P H+
Sbjct: 554 NGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHY 613
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
MVDLLGRAGLL EA + I +M +EP+ V WGSLL+ACRVHKN+D+ AAE++ ++P
Sbjct: 614 GCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDP 673
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
+ +G + L N+Y+S G+W+D A +R +K G K G S ++I K+ F D HP
Sbjct: 674 ERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHP 733
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ I + +I ++++G+VPD +VL DV E KE +L HSEKLAIAF LIST +
Sbjct: 734 EMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQG 793
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLR+C+DCHS K + K REI+VRD RFH F++G CSC DYW
Sbjct: 794 MPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 156/570 (27%), Positives = 251/570 (44%), Gaps = 114/570 (20%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
++++I ++ G AI +F +++ +P FT VL++CT L+ G +VH +V
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
K G + V NSL++ Y + G+ + VFD M +NV SW
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSW------------------ 208
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
S+I GY++ G EA+ +F M+ + ++P+ T+ +SACA L+
Sbjct: 209 -------------TSLIGGYAKRGCYKEAVSLFFEMV-EVGIRPNSVTMVGVISACAKLQ 254
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L+LG+Q+ I E + + NAL+ Y K G ++ A+K
Sbjct: 255 DLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARK------------------ 296
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
IFD D+++V + ++ Y + GL ++ + + M++ GP+P+
Sbjct: 297 ---------------IFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDR 341
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
T+ + +S S L + GK H LR+G +V NA+I MY K G A RVF+
Sbjct: 342 ITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDR 401
Query: 473 I-----------------------HWR-------QETVSWTSMIVALAQHGLGEEAIQLF 502
+ W+ + VSW +MI AL Q + +EAI+LF
Sbjct: 402 MLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELF 461
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK-IKPTPSHF-----ASM 556
M GI D +T VGV +AC + G ++ + K +H IK HF ++
Sbjct: 462 RVMQSEGITADKVTMVGVASACGYLGALD-------LAKWIHGYIKKKDIHFDMHLGTAL 514
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IEP 613
VD+ R G Q A M ++ DV AW + + A + N G I +L I+P
Sbjct: 515 VDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN-GTGAIELFDEMLQQGIKP 572
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
D + AL S G E +I +SMK
Sbjct: 573 DGV-VFVALLTALSHGGLVEQGWHIFRSMK 601
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 182/401 (45%), Gaps = 73/401 (18%)
Query: 227 LDLARAQFDQMIERDVVT-----WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
L+ A+ + IE + + ++S+I G+S G ++A+ +F ++ ++ PD FT
Sbjct: 84 LEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAV-PDNFTF 142
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
LSAC L G Q+H I++ F+ V N+LI Y + G ++ +++ ++ +
Sbjct: 143 PFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDK--M 200
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
S NV+++T+L+ GY K G K+AV LF
Sbjct: 201 SERNVVSWTSLIGGYAK-------------------------------RGCYKEAVSLFF 229
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKA 460
MV G +PN+ T+ ++S + L L G+Q+ E ++L V NAL+ MY K
Sbjct: 230 EMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMV-NALVDMYMKC 288
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G I+ AR++F+ + V + +++ + GL E + + ML+ G +PD IT +
Sbjct: 289 GAIDKARKIFDEC-VDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSA 347
Query: 521 LTACT-----------HGGLVEQGQRYYNMMKNV-------------------HKIKPTP 550
++AC+ HG ++ G ++ + N + T
Sbjct: 348 VSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTR 407
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ S++ R G ++ A+ MP + D+V+W +++ A
Sbjct: 408 VSWNSLIAGFVRNGDMESAWKIFSAMP-DSDLVSWNTMIGA 447
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/661 (39%), Positives = 398/661 (60%), Gaps = 39/661 (5%)
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
R + A+++ + + P ++L C L GK+VH+ + +G G + ++N
Sbjct: 103 RLREAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIG-LYISN 157
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
LL+MYAK G + A+ VFD M +++ SWN+++S ++ G + AR FD+M RD +
Sbjct: 158 RLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFS 217
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W ++I+G Q+ EAL ++ M K K +K T++S L+A A + L +GK+IH +I
Sbjct: 218 WTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHI 277
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R D+ + + + +LLD Y K G I
Sbjct: 278 MRMGLDS---------------------------------DEVVWCSLLDMYGKCGSIEE 304
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
AR IFD + +RDVV+WT M+ Y +NG ++ LFR ++ PN++T + +L+ +
Sbjct: 305 ARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACAD 364
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
LA+ D GKQIHA +R G S S ++AL+ MYSK G+I A+ VF ++ + + SWTS
Sbjct: 365 LAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTS 423
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++V AQHG ++A+ FE +L+ G KPD I ++GVL+AC H GLV++G Y++ +K H
Sbjct: 424 LLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKH 483
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ T H+A ++DLL RAG EA + I MP++PD W +LL CR+H NL+L K A
Sbjct: 484 GLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRA 543
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
A+ L IEP+N Y L N+Y+S G + ANIR++M G+ K G SW++I+ +VHV
Sbjct: 544 AKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHV 603
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V D HP+ I ++++ +KE+G+VPDT VLHDVE + KE+ L +HSEKLA+A
Sbjct: 604 FSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVA 663
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
FG+ISTP T +++ KNLR C DCH+AIKFI + R+I+VRD+ RFH F+ G CSC+DY
Sbjct: 664 FGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDY 723
Query: 785 W 785
W
Sbjct: 724 W 724
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 259/564 (45%), Gaps = 107/564 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL+ LK R GK VHA I G + +++ N L++ YAK S+ A+KVFDEM
Sbjct: 122 YLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMV 180
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ LCSWN ++S Y K G + A +F+ MPNRD+ SWT II + R + A+ ++
Sbjct: 181 HRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRL 240
Query: 136 MVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M + D + T++S LA+ A+ L GKK+H +++ GL V SLL+MY K G
Sbjct: 241 MQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCG 300
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ +FD M ++V SW ++ ++ +GR +
Sbjct: 301 SIEEARYIFDKMEERDVVSWTTMIHTYLKNGRRE-------------------------- 334
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
E +F +++ +S++ P+ FT A L+ACA+L LGKQIHAY++R FD+
Sbjct: 335 -----EGFALFRHLM-NSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSS 388
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+AL+ Y+K G +E A + +F+ L
Sbjct: 389 AASALVHMYSKCGDIENA---------------------------------KSVFEILPQ 415
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQ 433
D+ +WT++LVGY Q+G + A+ F +++ G KP+ +LS + +D G +
Sbjct: 416 PDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEY 475
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
H+ + G ++ +I + ++AG A + N
Sbjct: 476 FHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIIN---------------------- 513
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP-TPSH 552
E+ IKPD + +L C G +E +R K++ +I+P P+
Sbjct: 514 -------------EMPIKPDKYIWAALLGGCRIHGNLELAKR---AAKSLFEIEPENPAT 557
Query: 553 FASMVDLLGRAGLLQEAYNFIENM 576
+ ++ ++ AG+ E N E M
Sbjct: 558 YVTLANIYASAGMRAEEANIRETM 581
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 284/756 (37%), Positives = 437/756 (57%), Gaps = 56/756 (7%)
Query: 34 LVHARIIKCGLHLSVFL--KNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
L+ R++ + S F+ +NSL+ Y++ I A+ VFDEM K + SWN+I++ Y +
Sbjct: 82 LMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQ 141
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R A +F+ M R+++SW ++ Y G A +F M + V+
Sbjct: 142 NKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV--------- 192
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
S TA+ + Y K G A+ +F M KNV
Sbjct: 193 --SWTAM----------------------------VRGYVKEGMISEAETLFWQMPEKNV 222
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW V++ + GR+D A FD M E+DVVT +MI GY Q G EA ML D
Sbjct: 223 VSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEA-----RMLFD 277
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVE 330
+ + + + ++ +++ + +++ + + E T A++ Y G ++
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWT-----AMLKGYTNCGRLD 332
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A ++ I +V+A ++ + + G++ AR++FD +R++D W+AM+ YE+
Sbjct: 333 EASELFNAMPIK--SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERK 390
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
GL DA+ELFR M REG +PN +L ++LSV + LA+LDHG++IHA +RS + V+
Sbjct: 391 GLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVA 450
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ L++MY K GN+ A++VF+ + + V W S+I AQHGLG EA+++F M GI
Sbjct: 451 SVLLSMYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGI 509
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
PD +T+VGVL+AC++ G V++G +N M+ ++++ H+A MVDLLGRAG L EA
Sbjct: 510 MPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAM 569
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+ IE MP+E D + WG+LL ACR H LDL ++AA+KLL++EP N+G + L N+Y+S G
Sbjct: 570 DLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQG 629
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEI 689
+W+D A +R++M+ V K G SW+ ++ KVH F G + HP+ I + + +
Sbjct: 630 RWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLL 689
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+E G+ PD + VLHDV+E+ K Q L +HSEKLA+A+GL+ P +R+MKNLRVC DCH
Sbjct: 690 REAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCH 749
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+AIK I K+ REI++RDA RFHHFK G CSCRDYW
Sbjct: 750 AAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/734 (36%), Positives = 433/734 (58%), Gaps = 47/734 (6%)
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+L++ + + ++ A ++F + T+ N++L+ Y K +D A E+F+ MP RD VS
Sbjct: 198 ALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVS 257
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++ ++ GR + A+ M V+M V T TS L +C L L GK++H+ V+
Sbjct: 258 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 317
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
+ V ++L+ +YAK G AK VF+ SLH
Sbjct: 318 RNLPHIDPYVASALVELYAKSGCFKEAKGVFN--------------SLH----------- 352
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
+R+ V W +I+G+ Q G E++ +F N ++ + D+F LA+ +S C +
Sbjct: 353 ------DRNNVAWTVLISGFLQYGCFTESVELF-NQMRAELMTLDQFALATLISGCCSRM 405
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L LG+Q+H+ +++ V N+LIS YAK ++ A+ I ++ +++++T++
Sbjct: 406 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRF--MNEKDIVSWTSM 463
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG-PKPN 411
+ Y ++G++ AR FD + +++V+ W AML Y Q+G +D + +++ M+ E +P+
Sbjct: 464 ITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPD 523
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
T + + L + G QI ++ G SV+NA+ITMYSK G I AR+VF+
Sbjct: 524 WVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFD 583
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
++ + + VSW +MI +QHG+G++AI++F+ +L+ G KPD+I+YV VL+ C+H GLV+
Sbjct: 584 FLNVK-DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 642
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+G+ Y++MMK H I P HF+ MVDLLGRAG L EA + I++MP++P WG+LLSA
Sbjct: 643 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 702
Query: 592 CRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQ 651
C++H N +L ++AA+ + ++ +SG+Y + +Y+ GK +D+A IRK M+ G+KK
Sbjct: 703 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 762
Query: 652 GFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKE 711
G+SW+++ NKVHVF +D HPQ AI K+ ++ ++I +G+V T S ++
Sbjct: 763 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR-TDSTRSEI------ 815
Query: 712 QMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRF 771
HHSEKLA+AFGL++ P + IMKNLR+C DCH+ IK I + RE V+RDA RF
Sbjct: 816 ----HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRF 871
Query: 772 HHFKKGLCSCRDYW 785
HHF G CSC DYW
Sbjct: 872 HHFNGGSCSCGDYW 885
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 191/668 (28%), Positives = 319/668 (47%), Gaps = 90/668 (13%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF-DEMPVKTLCSWNTILSAYAKQGR 94
H R++ GL +VFL+N+L++ Y ++S A+++ ++ + + N +L+ YAK GR
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLA 153
L A E+F MP RD SW T++ Y + ++ ++ F+ M + P FT+ +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC ALG S ++ + V K V +L++M+ + G +A +F ++ +
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
N +++ ++ + +D A FD M ERDVV+WN M++ SQ+G EAL M +M +
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM-QSKG 285
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
++ D T S+L+ACA L L+ GKQ+HA +IR V +AL+ YAK G + A+
Sbjct: 286 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 345
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ F+SL DR+ VAWT ++ G+ Q G
Sbjct: 346 GV---------------------------------FNSLHDRNNVAWTVLISGFLQYGCF 372
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
++VELF M E + + L+ ++S S L G+Q+H+ L+SG+ ++ VSN+L
Sbjct: 373 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 432
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I+MY+K N+ +A +F ++ ++ VSWTSMI A +Q G +A + F+ M E +
Sbjct: 433 ISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV--- 488
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
IT+ +L A G E G R Y +M L E Y
Sbjct: 489 -ITWNAMLGAYIQHGAEEDGLRMYKVM-------------------------LSEEY--- 519
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
+ PD V + +L C LG +I + + ++ +A+ +YS CG+
Sbjct: 520 ----VRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRI 575
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+A RK ++ VK ++ + H G + AI +I+D+I +
Sbjct: 576 LEA---RKVFDFLNVKDIVSWNAMITGYSQHGMG--------KQAI-----EIFDDILKR 619
Query: 693 GFVPDTAS 700
G PD S
Sbjct: 620 GAKPDYIS 627
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 246/500 (49%), Gaps = 25/500 (5%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL--- 208
L SC A G L+ + +H +V GL+ V + N+LL+ Y G A+ D RL
Sbjct: 31 LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCG------ALSDARRLLLM 84
Query: 209 ----KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
NV + NV+++ + GRL A F +M RDV +WN++++GY Q+ +L
Sbjct: 85 DIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLET 144
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F +M + P+ FTLA + +C L L Q+ A + + + V AL+ +
Sbjct: 145 FLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFV 204
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ G V++A ++ + I + ++L GY+K + A +FDS+ +RDVV+W M+
Sbjct: 205 RCGAVDLASRLFVR--IKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMV 262
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Q+G ++A+++ M +G + ++ T ++ L+ + L+SL GKQ+HA +R+
Sbjct: 263 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPH 322
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
V++AL+ +Y+K+G A+ VFN +H R V+WT +I Q+G E+++LF +
Sbjct: 323 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRN-NVAWTVLISGFLQYGCFTESVELFNQ 381
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + D +++ C + G++ +++ +I+ S++ + +
Sbjct: 382 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCD 440
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSAL 622
LQ A M E D+V+W S+++A +G +A + + N ++A+
Sbjct: 441 NLQSAEAIFRFMN-EKDIVSWTSMITAYS-----QVGNVAKAREFFDGMSEKNVITWNAM 494
Query: 623 CNLYSSCGKWEDAANIRKSM 642
Y G ED + K M
Sbjct: 495 LGAYIQHGAEEDGLRMYKVM 514
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 140/269 (52%), Gaps = 33/269 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H+ +K G +V + NSL++ YAK +++ A+ +F M K + SW ++++AY+
Sbjct: 409 LGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYS 468
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTVT 149
+ G + A E F+ M ++ ++W ++ Y + G ++ +RM+ M+ ++ V P T
Sbjct: 469 QVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYV 528
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C LG G ++ VK GL +V N+++ MY+K G + A+ VFD + +K
Sbjct: 529 TLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVK 588
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ SW N+MI GYSQ+G +A+ +F ++L
Sbjct: 589 DIVSW-------------------------------NAMITGYSQHGMGKQAIEIFDDIL 617
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGK 298
K + KPD + + LS C++ ++ GK
Sbjct: 618 KRGA-KPDYISYVAVLSGCSHSGLVQEGK 645
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 268/704 (38%), Positives = 412/704 (58%), Gaps = 70/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S +K G L A VF+ M N+DSVSW ++I + G+ A F M
Sbjct: 242 NSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAK 301
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT T SV+ SC +L +L + +H +K+GLS NV +L+ K + A ++
Sbjct: 302 PTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSL 361
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M V S VV+W +MI+GY QNG +A+
Sbjct: 362 FSLMH--GVQS----------------------------VVSWTAMISGYLQNGDTDQAV 391
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F+ +++ +KP+ FT ++ L+ ++ +IHA +I+T ++ + VG
Sbjct: 392 NLFS-LMRREGVKPNHFTYSTILT----VQHAVFISEIHAEVIKTNYEKSSSVG------ 440
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
T LLD ++KIG+I A ++F+ + +DV+AW+A
Sbjct: 441 ---------------------------TALLDAFVKIGNISDAVKVFELIETKDVIAWSA 473
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRS 441
ML GY Q G ++A ++F + REG KPN +T +++ + ++ AS++ GKQ HA A++
Sbjct: 474 MLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKL 533
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
++L VS++L+T+Y+K GNI +A +F R + VSW SMI AQHG ++A+++
Sbjct: 534 RLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKER-DLVSWNSMISGYAQHGQAKKALEV 592
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FE M + ++ D IT++GV++AC H GLV +GQ Y+N+M N H I PT H++ M+DL
Sbjct: 593 FEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYS 652
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG+L +A + I MP P W +L+A RVH+N++LGK+AAEK++ +EP +S AY
Sbjct: 653 RAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVL 712
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y++ G W + N+RK M VKK G+SW++++NK + F D HP D IY+K
Sbjct: 713 LSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSK 772
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
++++ ++++G+ PDT V HD+E++ KE +L HHSE+LAIAFGLI+T L+I+KN
Sbjct: 773 LSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKN 832
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCHS IK + + R IVVRD+ RFHHFK GLCSC DYW
Sbjct: 833 LRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 248/495 (50%), Gaps = 71/495 (14%)
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
A ++F+ P RD ++ Y+ + + A+ +FV + + + P +T++ VL+ C
Sbjct: 54 FAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCA 113
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
+ + G++VH VK GL ++V NSL++MY K G+ V DG R+
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGN------VRDGRRV-------- 159
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
FD+M +RDVV+WNS++ GYS N ++ + +F +++ +P
Sbjct: 160 -----------------FDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFC-LMQVEGYRP 201
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D +T+++ ++A AN + +G QIHA +++ F+ V N+LIS +K G +
Sbjct: 202 DYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLR------ 255
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
AR +FD++ ++D V+W +M+ G+ NG + +A
Sbjct: 256 ---------------------------DARVVFDNMENKDSVSWNSMIAGHVINGQDLEA 288
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
E F +M G KP + T ++++ +SL L + +H L+SG +++ +V AL+
Sbjct: 289 FETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVA 348
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
+K I+ A +F+L+H Q VSWT+MI Q+G ++A+ LF M G+KP+H T
Sbjct: 349 LTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFT 408
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
Y +LT H + + + ++K + + S +++D + G + +A E +
Sbjct: 409 YSTILTV-QHAVFI--SEIHAEVIKT--NYEKSSSVGTALLDAFVKIGNISDAVKVFELI 463
Query: 577 PLEPDVVAWGSLLSA 591
+ DV+AW ++L+
Sbjct: 464 ETK-DVIAWSAMLAG 477
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 136/316 (43%), Gaps = 72/316 (22%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM-PVKTLCSWNTILSAYAK 91
+++H + +K GL + + +LM K + I A +F M V+++ SW ++S Y +
Sbjct: 324 RVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQ 383
Query: 92 QGRLDLACEVFNLM------PN-----------------------------RDSVSWTTI 116
G D A +F+LM PN + S T +
Sbjct: 384 NGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTAL 443
Query: 117 IVTYNEIGRFKNAIRMFV-------------------------------EMVQDQVLPTQ 145
+ + +IG +A+++F ++ ++ + P +
Sbjct: 444 LDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNE 503
Query: 146 FTVTSVLASCTA-LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT S++ +CTA + GK+ H++ +K L+ + V++SL+ +YAK G+ A +F
Sbjct: 504 FTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFK 563
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
+ +++ SWN ++S + G+ A F++M +E D +T+ +I+ + G +
Sbjct: 564 RQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGK 623
Query: 261 ALGMFANMLKDSSLKP 276
F M+ D + P
Sbjct: 624 GQNYFNIMINDHHINP 639
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 102/198 (51%), Gaps = 14/198 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMN-FYAKTESISYAKKVFDEMPVK-----TLCSWNTI 85
K+ H ++ + G+ + F S++N A T S+ K+ F +K LC +++
Sbjct: 488 AKIFH-QLTREGIKPNEFTFCSIINACTAPTASVEQGKQ-FHAYAIKLRLNNALCVSSSL 545
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
++ YAK+G ++ A E+F RD VSW ++I Y + G+ K A+ +F EM + +
Sbjct: 546 VTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDA 605
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKA--V 202
T V+++C G + G+ + ++ ++ + + ++++Y++ G M+ KA +
Sbjct: 606 ITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAG--MLGKAMDI 663
Query: 203 FDGMRLKNVSS-WNVVVS 219
+GM ++ W +V++
Sbjct: 664 INGMPFPPAATVWRIVLA 681
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/704 (37%), Positives = 402/704 (57%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++S Y K G +D A +VF+ + RD ++ +I Y + G + A ++F M Q+
Sbjct: 201 TALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFK 260
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + + S+L C+ L+ GK VH+ + TGL V V +L+ MY
Sbjct: 261 PNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMY------------ 308
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+ G ++ AR FD+M RDVV+W MI GY++N +A
Sbjct: 309 -------------------MGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAF 349
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G+FA M ++ ++PD+ T ++ACA+ L L ++IH+ ++R F V AL+
Sbjct: 350 GLFATM-QEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHM 408
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G I AR++FD++ RDVV+W+A
Sbjct: 409 YAKCGA---------------------------------IKDARQVFDAMSRRDVVSWSA 435
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y +NG ++A E F M R +P+ T +L+ L +LD G +I+ A+++
Sbjct: 436 MIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKAD 495
Query: 443 EASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S + V NALI M K G+I AR +F N++ +++ V+W MI + HG EA+ L
Sbjct: 496 LVSHIPVGNALINMNVKHGSIERARYIFENMV--QRDVVTWNVMIGGYSLHGNAREALDL 553
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+RML+ +P+ +T+VGVL+AC+ G VE+G+R+++ + + I PT + MVDLLG
Sbjct: 554 FDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLG 613
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L EA I MPL+P+ W +LL+ACR++ NLD+ + AAE+ L+ EP + Y
Sbjct: 614 RAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQ 673
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L ++Y++ G WE+ A +RK M+ GV+K QG +W++++ K+H F VED HPQ IY +
Sbjct: 674 LSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAE 733
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+A++ IK G++P T +VLH+V E KE+ + +HSEKLAIA+G++S P +RI KN
Sbjct: 734 LARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKN 793
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCHSA KFI K+ REI+ RDA+RFHHFK G+CSC DYW
Sbjct: 794 LRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 271/582 (46%), Gaps = 99/582 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L Q + R+ +GK V II+ G L+++ N+L+ ++ ++ A++ FD +
Sbjct: 64 YVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVE 123
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
KT+ V+W II Y ++G K A +F +
Sbjct: 124 NKTV-------------------------------VTWNAIIAGYAQLGHVKEAFALFRQ 152
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
MV + + P+ T VL +C++ L GK+ H+ V+K G + +L++MY K G
Sbjct: 153 MVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGS 212
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFDG+ ++VS++NV MI GY+++
Sbjct: 213 MDGARQVFDGLYKRDVSTFNV-------------------------------MIGGYAKS 241
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +A +F M ++ KP++ + S L C+ E L GK +HA + T V
Sbjct: 242 GDGEKAFQLFYRMQQE-GFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
ALI Y G +E A+++ FD ++ R
Sbjct: 301 ATALIRMYMGCGSIEGARRV---------------------------------FDKMKVR 327
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVV+WT M+ GY +N +DA LF +M EG +P+ T +++ +S A L ++IH
Sbjct: 328 DVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIH 387
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ +R+G + L V AL+ MY+K G I AR+VF+ + R++ VSW++MI A ++G G
Sbjct: 388 SQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS-RRDVVSWSAMIGAYVENGCG 446
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EEA + F M ++PD +TY+ +L AC H G ++ G Y + P A
Sbjct: 447 EEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNA- 505
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
++++ + G ++ A ENM ++ DVV W ++ +H N
Sbjct: 506 LINMNVKHGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGN 546
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 219/488 (44%), Gaps = 99/488 (20%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T + C L D GK+V ++++G
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSG------------------------------- 91
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
R N+ N ++ LH G + AR FD + + VVTWN++IAGY+Q G+ EA +F
Sbjct: 92 RQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFR 151
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M+ D +++P T L AC++ LKLGK+ HA +I+ F + +G AL+S Y K
Sbjct: 152 QMV-DEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKG 210
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G ++ A+++ + G+ +V F ++ GY K GD
Sbjct: 211 GSMDGARQVFD--GLYKRDVSTFNVMIGGYAKSGD------------------------- 243
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+ A +LF M +EG KPN + ++L S+ +L GK +HA + +G
Sbjct: 244 ------GEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V+ ALI MY G+I ARRVF+ + R + VSWT MI A++ E+A LF M
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVR-DVVSWTVMIRGYAENSNIEDAFGLFATMQ 356
Query: 507 ELGIKPDHITYVGVLTACT-----------HGGLVEQG--------QRYYNMMKNVHKIK 547
E GI+PD ITY+ ++ AC H +V G +M IK
Sbjct: 357 EEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIK 416
Query: 548 PTPSHFASMV--DLLGRAGLLQ------------EAYNFIENMPLEPDVVAWGSLLSACR 593
F +M D++ + ++ E ++ ++ +EPDVV + +LL+AC
Sbjct: 417 DARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACG 476
Query: 594 VHKNLDLG 601
LDLG
Sbjct: 477 HLGALDLG 484
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 185/420 (44%), Gaps = 92/420 (21%)
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L + S D T C L LGKQ+ +II
Sbjct: 52 LGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHII----------------------- 88
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
QSG LN+ TL+ + G++ AR+ FDS+ ++ VV W A++ GY
Sbjct: 89 ---------QSG-RQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYA 138
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q G K+A LFR MV E +P+ T +L SS A L GK+ HA ++ G S
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFR 198
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ AL++MY K G+++ AR+VF+ + ++++ ++ MI A+ G GE+A QLF RM +
Sbjct: 199 IGTALVSMYVKGGSMDGARQVFDGL-YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQE 257
Query: 509 GIKPDHITYVGVLTACT-----------HG------------------------GLVEQG 533
G KP+ I+++ +L C+ H G +E
Sbjct: 258 GFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGA 317
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP---LEPDVVAWGSLLS 590
+R ++ M K++ S + M+ +++A+ M ++PD + + +++
Sbjct: 318 RRVFDKM----KVRDVVS-WTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIIN 372
Query: 591 ACRVHKNLDLGKIAAEKL--------LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
AC +L L + ++ LL++ +AL ++Y+ CG +DA + +M
Sbjct: 373 ACASSADLSLAREIHSQVVRAGFGTDLLVD-------TALVHMYAKCGAIKDARQVFDAM 425
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 63/290 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y H++ + S + + + +H+++++ G + + +L++ YAK +I A++VFD M
Sbjct: 367 YIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS 426
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + SW+ ++ AY + G + A E F+LM
Sbjct: 427 RRDVVSWSAMIGAYVENGCGEEAFETFHLMK----------------------------- 457
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
++ V P T ++L +C LG L G ++++ +K L + V N+L+NM K G
Sbjct: 458 --RNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGS 515
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +F+ M ++V +WNV MI GYS +
Sbjct: 516 IERARYIFENMVQRDVVTWNV-------------------------------MIGGYSLH 544
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
G EAL +F MLK+ +P+ T LSAC+ ++ G++ +Y++
Sbjct: 545 GNAREALDLFDRMLKE-RFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLL 593
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/758 (36%), Positives = 410/758 (54%), Gaps = 103/758 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y++ G L A ++F+ M RD VS+ ++I + G A+ +F +M D
Sbjct: 290 NALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK 349
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P TV S+L++C ++G L GK+ HS+ +K G++ + V SLL++Y K D A
Sbjct: 350 PDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 409
Query: 203 F------DGMR--------------------------------------------LKNVS 212
F D + LK
Sbjct: 410 FLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGF 469
Query: 213 SWNVVVS-----LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+NV VS ++ G+LD A F ++ E DVV+W +MIAGY+Q+ EAL +F
Sbjct: 470 QFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKE 529
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D +K D AS +SACA ++ L G+QIHA + + +GNAL+S YA+ G
Sbjct: 530 M-QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCG 588
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
V A FD + +D V+W +++ G+
Sbjct: 589 KVR---------------------------------EAYAAFDQIYAKDNVSWNSLVSGF 615
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q+G ++A+ +F M + G + N++T + +S ++++A++ GKQIH ++G S
Sbjct: 616 AQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSET 675
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
VSNALIT+Y+K G I + +SW SMI +QHG G EA++LFE M +
Sbjct: 676 EVSNALITLYAKCGTI--------------DDISWNSMITGYSQHGCGFEALKLFEDMKQ 721
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
L + P+H+T+VGVL+AC+H GLV++G Y+ M H + P P H+A +VDLLGR+GLL
Sbjct: 722 LDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLS 781
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
A F+E MP++PD + W +LLSAC VHKN+D+G+ AA LL +EP +S Y + N+Y+
Sbjct: 782 RAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYA 841
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
GKW+ R+ MK GVKK G SWV++ N VH F D HP+ D IY + +
Sbjct: 842 VSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDF 901
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E G+VP S+L D E K+ HSE+LAIAFGL+S +T L + KNLRVC D
Sbjct: 902 RAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCED 961
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ IK + K+ DR I+VRD+ RFHHFK G CSC+DYW
Sbjct: 962 CHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 165/632 (26%), Positives = 276/632 (43%), Gaps = 153/632 (24%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA+ I G S F+ N L++ Y K +S AKK
Sbjct: 186 IHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKK------------------------- 220
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
VF + RDSVSW +I ++ G + A+ +F ++V L++
Sbjct: 221 ------VFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSA 260
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
CT + GK++H V+K G S V N+L+ +Y++ G+ A+ +F M ++ S+
Sbjct: 261 CTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSY 320
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N S+I+G +Q GY AL +F M D
Sbjct: 321 N-------------------------------SLISGLAQQGYINRALALFKKMNLDCQ- 348
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK--------- 325
KPD T+AS LSACA++ L GKQ H+Y I+ + V +L+ Y K
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408
Query: 326 ------------------------------------------VGGVEIAQKI---VEQSG 340
+G ++ ++I V ++G
Sbjct: 409 FFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG 468
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+ NV + L+D Y K G + A +IF L++ DVV+WTAM+ GY Q+ +A+ LF
Sbjct: 469 FQF-NVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLF 527
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
+ M +G K +N ++ +S + + +LD G+QIHA + SG + LS+ NAL+++Y++
Sbjct: 528 KEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC 587
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G + A F+ I + ++ VSW S++ AQ G EEA+ +F +M + G++ + T+
Sbjct: 588 GKVREAYAAFDQI-YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSA 646
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-----------------SMVDLLGRA 563
++A + V G++ + M++ T A SM+ +
Sbjct: 647 VSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDISWNSMITGYSQH 706
Query: 564 GLLQEAYNFIENMP---LEPDVVAWGSLLSAC 592
G EA E+M + P+ V + +LSAC
Sbjct: 707 GCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 241/564 (42%), Gaps = 109/564 (19%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ Y G L+ A VF+ MP R W I T+ +F M+ V
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162
Query: 145 QFTVTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+ VL C+ +++H+ + +G + N L+++Y K
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFK----------- 211
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+G L A+ F+ + RD V+W +MI+G SQNGY+ EA+
Sbjct: 212 --------------------NGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAML 251
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F ++ LSAC +E + GKQ+H +++ F + V NAL++ Y
Sbjct: 252 LFCQIV---------------LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLY 296
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL----RDRDVVA 379
++ G + A++I +S + +++ +L+ G + G I A +F + + D V
Sbjct: 297 SRSGNLSSAEQIFH--CMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVT 354
Query: 380 WTAML-----VGYEQNG------------------------------------------- 391
++L VG NG
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYG 414
Query: 392 ----LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
LNK + ++F M EG PN +T ++L ++L + D G+QIH L++G ++
Sbjct: 415 QLDNLNK-SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV 473
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
VS+ LI MY+K G ++ A ++F + + VSWT+MI QH EA+ LF+ M +
Sbjct: 474 YVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD 532
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GIK D+I + ++AC ++QG R + + S ++V L R G ++
Sbjct: 533 QGIKSDNIGFASAISACAGIQALDQG-RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVR 591
Query: 568 EAYNFIENMPLEPDVVAWGSLLSA 591
EAY + + D V+W SL+S
Sbjct: 592 EAYAAFDQI-YAKDNVSWNSLVSG 614
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 31/266 (11%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+D Y+ GD+ A +FD + R + W + + L LFR M+ + + +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162
Query: 412 NYTLSAML-SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
+ +L S + S +QIHA + SG SS + N LI +Y K G +++A++VF
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM----------LELGIKPDHI----- 515
+ R ++VSW +MI L+Q+G EEA+ LF ++ E G + +
Sbjct: 223 ENLKAR-DSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQG 281
Query: 516 ----TYV--GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
TYV ++T + G + ++ ++ M ++ + S++ L + G + A
Sbjct: 282 FSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS-----YNSLISGLAQQGYINRA 336
Query: 570 YNFIENMPLE---PDVVAWGSLLSAC 592
+ M L+ PD V SLLSAC
Sbjct: 337 LALFKKMNLDCQKPDCVTVASLLSAC 362
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/777 (35%), Positives = 423/777 (54%), Gaps = 98/777 (12%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF ++ ++ + SR+ G+ VHA +I+ G VF N+L++ Y+K
Sbjct: 198 VQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKL------- 250
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
G + +A VF +P D VSW I G ++
Sbjct: 251 ------------------------GDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQH 286
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ + ++M ++P FT++S+L +C G + G+++H F+VK + L++
Sbjct: 287 ALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVD 346
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK G LD A+ FD + +RD+V WN++
Sbjct: 347 MYAK-------------------------------HGLLDDAKKVFDWIPQRDLVLWNAL 375
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+G S EAL +F M K+ ++ TLA+ L + A+LE + +Q+HA +
Sbjct: 376 ISGCSHGAQHAEALSLFCRMRKEG-FDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLG 434
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
F + V N LI D Y K + A R+
Sbjct: 435 FLSDSHVVNGLI---------------------------------DSYWKCDCLNYAYRV 461
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+ D++A+T+M+ Q +DA++LF M+R+G P+ + LS++L+ +SL++
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAY 521
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ GKQ+HA ++ S + NAL+ Y+K G+I A F+ + + VSW++MI
Sbjct: 522 EQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGG 580
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
LAQHG G+ A+ +F RM++ I P+HIT VL AC H GLV++ +RY+N MK + I+
Sbjct: 581 LAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIER 640
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
T H+A M+DLLGRAG L +A + +MP + + WG+LL+A RVH++ +LG++AAEKL
Sbjct: 641 TEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKL 700
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
++EP+ SG + L N Y+S G W+D A +RK MK VKK SWV++++KVH F V
Sbjct: 701 FILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVG 760
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D HP+ IY K+ ++ D + + G+VP+ LHDV+++ KE +L HHSE+LA+AF LI
Sbjct: 761 DKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALI 820
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
STP +R+ KNLR+C DCH+A KFI +V REI++RD RFHHF+ G CSCRDYW
Sbjct: 821 STPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 193/719 (26%), Positives = 311/719 (43%), Gaps = 160/719 (22%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
LE LL +++ G +HA ++K GL +VF +N L++FY+K A++VFD
Sbjct: 4 LETIGPLLTRYAATQSLLQGAHIHAHLLKSGL-FAVF-RNHLLSFYSKCRLPGSARRVFD 61
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
E+P SW+++++AY+ N MP ++A+
Sbjct: 62 EIPDPCHVSWSSLVTAYSN-----------NAMP--------------------RDALGA 90
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F M V +F + VL C D G ++H+ + TGL G + V N+L+ MY
Sbjct: 91 FRSMRSCSVRCNEFVLPVVL-KCAP--DAGFGTQLHALAMATGLGGDIFVANALVAMYGG 147
Query: 193 VGDEMMAKAVFDGMRL-KNVSSWNVVVSLHIHSGRLDLARAQFDQMI------------- 238
G A+ VFD +N SWN ++S ++ + R A F +M+
Sbjct: 148 FGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSC 207
Query: 239 --------------------------ERDVVTWNSMIAGYSQ------------------ 254
++DV T N+++ YS+
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD 267
Query: 255 -------------NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+G+D AL + M K S L P+ FTL+S L ACA LG+QIH
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQM-KSSGLVPNVFTLSSILKACAGSGAFNLGRQIH 326
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
++++ D+ + L+ YAK G LLD
Sbjct: 327 GFMVKANADSDNYIAFGLVDMYAKHG------------------------LLD------- 355
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
A+++FD + RD+V W A++ G + +A+ LF M +EG N TL+A+L
Sbjct: 356 --DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
++SL ++ +Q+HA A + G S V N LI Y K +N A RVF H + ++
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEK-HGSYDIIA 472
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
+TSMI AL+Q GE+AI+LF ML G+ PD +L AC EQG++ +
Sbjct: 473 FTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVH---- 528
Query: 542 NVHKIKPT--PSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH-- 595
H IK FA ++V + G +++A +P E VV+W +++ H
Sbjct: 529 -AHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQHGH 586
Query: 596 --KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV-GVKKTQ 651
+ LD+ ++ I P++ S LC + G ++A SMK + G+++T+
Sbjct: 587 GKRALDVFHRMVDE--HISPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIERTE 642
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/770 (36%), Positives = 423/770 (54%), Gaps = 100/770 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNS-LMNFYAKTESISYAKKVFDEMPVK 77
LLQ+ + ++ VG+ +H + + F+ N+ ++ Y+ S S ++ VFD++ K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
L WN I+SAY T NE+ F++A+ +F E++
Sbjct: 171 NLFQWNAIVSAY-----------------------------TRNEL--FEDAMSIFSELI 199
Query: 138 Q-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG-D 195
+ P FT+ V+ +C L DL G+ +H K L V V N+L+ MY K G
Sbjct: 200 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 259
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
E K VFD M K VSS WN+++ GY+QN
Sbjct: 260 EEAVKRVFDLMDTKTVSS-------------------------------WNALLCGYAQN 288
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+AL ++ M DS L PD FT+ S L AC+ ++ L G++IH + +R
Sbjct: 289 SDPRKALDLYLQM-TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRN-------- 339
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G+ + I GIS L++ YI G A+ +FD + R
Sbjct: 340 ------------GLAVDPFI----GISLLSL---------YICCGKPFAAQVLFDGMEHR 374
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+V+W M+ GY QNGL +A+ LFR M+ +G +P + + S L++L GK++H
Sbjct: 375 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH 434
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
AL++ + VS+++I MY+K G I ++R+F+ + ++ SW +I HG G
Sbjct: 435 CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGRG 493
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+EA++LFE+ML LG+KPD T+ G+L AC+H GLVE G Y+N M N+H I+P H+
Sbjct: 494 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 553
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VD+LGRAG + +A IE MP +PD W SLLS+CR+H NL LG+ A KLL +EP+
Sbjct: 554 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK 613
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
Y + NL++ GKW+D +R MK +G++K G SW+++ KVH F + D + P+
Sbjct: 614 PENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPEL 673
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ + ++ +I +G+ PDT SVLHD+EE+ K +LR HSEKLAI+FGL++T +
Sbjct: 674 EEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLP 733
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLR+C DCH+A KFI K+V+R+IVVRD RFHHF+ G+CSC DYW
Sbjct: 734 VRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNL 472
+ +L ++ G+++H S + + ++ +ITMYS G+ + +R VF+
Sbjct: 107 AMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDK 166
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI-KPDHITYVGVLTACTHGGLVE 531
+ R+ W +++ A ++ L E+A+ +F ++ + KPD+ T V+ AC GL++
Sbjct: 167 LR-RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLD 223
Query: 532 --QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
GQ + M + + A ++ + G+ GL++EA + ++ V +W +LL
Sbjct: 224 LGLGQIIHGMATKMDLVSDVFVGNA-LIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282
Query: 590 SACRVHKNLD 599
C +N D
Sbjct: 283 --CGYAQNSD 290
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/703 (36%), Positives = 401/703 (57%), Gaps = 66/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++L Y K G ++ A ++FNL + V W ++V Y +I + +F +M +
Sbjct: 284 GSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIH 343
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P QFT +L +CT G + G+++HS +K G + V+ L++MY+K G
Sbjct: 344 PNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGC------- 396
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LD AR + + +RDVV+W SMIAGY Q+ + EAL
Sbjct: 397 ------------------------LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M +D + PD LAS SACA ++ ++ G QIHA + + + A + N L++
Sbjct: 433 ATFKEM-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNL 491
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G E A +F + +D + W
Sbjct: 492 YARCGRSE---------------------------------EAFSLFREIEHKDEITWNG 518
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ Q+ L K A+ +F M + G K N +T + +S ++LA + GKQ+H A+++G
Sbjct: 519 LISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTG 578
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S V+NALI++Y K G+I A+ +F+ + R E VSW ++I + +QHG G EA+ LF
Sbjct: 579 HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE-VSWNTIITSCSQHGRGLEALDLF 637
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + G+KP+ +T++GVL AC+H GLVE+G Y+ M NV+ + P P H+A +VD+LGR
Sbjct: 638 DQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGR 697
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A F++ MP+ + + W +LLSAC+VHKN+++G++AA+ LL +EP +S +Y L
Sbjct: 698 AGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLL 757
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N Y+ GKW + +RK MK G++K G SW++++N VH F V D LHP D IY +
Sbjct: 758 SNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFL 817
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+++ D + ++G+ + ++ H+ E++ K+ HSEKLA+AFGL++ P LR++KNL
Sbjct: 818 SELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNL 877
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC+DCHS +K ++ REIV+RD RFHHF G CSC DYW
Sbjct: 878 RVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 236/510 (46%), Gaps = 70/510 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G + A +VF + +RD VSW ++ Y + G K A R++ +M V+
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + ++SVL++CT + G+ +H+ V K V N+L+ +Y G +A+ V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M + ++N ++S H G + A FD+M
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEM------------------------- 236
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ S L+PD T+AS L+ACA++ L+ GKQ+H+Y+++ +L+
Sbjct: 237 -------QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDL 289
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWT 381
Y K G +E A I +L DR +VV W
Sbjct: 290 YVKCGDIETAHDIF----------------------------------NLGDRTNVVLWN 315
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
MLV Y Q + E+F M G PN +T +L + ++ G+QIH+ ++++
Sbjct: 316 LMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKN 375
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S + VS LI MYSK G ++ AR++ ++ +++ VSWTSMI QH EEA+
Sbjct: 376 GFESDMYVSGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTSMIAGYVQHDFCEEALAT 434
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + G+ PD+I +AC + QG + + + V S + ++V+L
Sbjct: 435 FKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY-VSGYAADISIWNTLVNLYA 493
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
R G +EA++ + D + W L+S
Sbjct: 494 RCGRSEEAFSLFREIE-HKDEITWNGLISG 522
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 228/486 (46%), Gaps = 76/486 (15%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
E+ A +V G+ + N+++ L+ +G + AR F ++ RD V+W +M++GY+Q+
Sbjct: 64 EIHATSVVRGLGADRLIG-NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA +++ M +++ P + L+S LSAC + G+ IHA + + F + V
Sbjct: 123 GLGKEAFRLYSQM-HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNALI+ Y G ++A+++ + + + + F TL+ G
Sbjct: 182 GNALIALYLGFGSFKLAERVF--CDMLFCDRVTFNTLISG-------------------- 219
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ Q G + A+++F M G +P+ T++++L+ +S+ L GKQ+H
Sbjct: 220 -----------HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLH 268
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ L++G + +L+ +Y K G+I A +FNL R V W M+VA Q
Sbjct: 269 SYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD-RTNVVLWNLMLVAYGQISDL 327
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFA 554
++ ++F +M GI P+ TY +L CT G +E G++ +++ +KN + S
Sbjct: 328 AKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS--G 385
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEKLLLIE 612
++D+ + G L +A +E M + DVV+W S+++ H + L + +
Sbjct: 386 VLIDMYSKYGCLDKARKILE-MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444
Query: 613 PDNSGAYSA----------------------------------LCNLYSSCGKWEDAANI 638
PDN G SA L NLY+ CG+ E+A ++
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504
Query: 639 RKSMKY 644
+ +++
Sbjct: 505 FREIEH 510
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 269/767 (35%), Positives = 427/767 (55%), Gaps = 97/767 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L+ S N G++VH+ I+ G L F+ L++ Y+K
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKC----------------- 378
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G A +VF + + D VSW+ II ++ G+ + A +F M
Sbjct: 379 --------------GLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRH 424
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V+P QFT+ S++++ T LGDL G+ +H+ V K G V N+L+ MY K+G
Sbjct: 425 SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIG---- 480
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+V DG R+ F+ RD+++WN++++G+ N
Sbjct: 481 --SVQDGCRV-------------------------FEATTNRDLISWNALLSGFHDNETC 513
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
L +F ML + P+ +T S L +C++L + LGKQ+HA I++ D VG A
Sbjct: 514 DTGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTA 572
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+ YAK + +E A IF+ L RD+
Sbjct: 573 LVDMYAK-------NRFLED--------------------------AETIFNRLIKRDLF 599
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
AWT ++ GY Q+G + AV+ F M REG KPN +TL++ LS S +A+LD G+Q+H+ A
Sbjct: 600 AWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMA 659
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+++G++ + V++AL+ MY+K G + A VF+ + R +TVSW ++I +QHG G +A
Sbjct: 660 IKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSR-DTVSWNTIICGYSQHGQGGKA 718
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
++ FE ML+ G PD +T++GVL+AC+H GL+E+G++++N + ++ I PT H+A MVD
Sbjct: 719 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVD 778
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+LGRAG E +FIE M L +V+ W ++L AC++H N++ G+ AA KL +EP+
Sbjct: 779 ILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSN 838
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N++++ G W+D N+R M GVKK G SWV++ +VHVF D HP+ I
Sbjct: 839 YILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREI 898
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+ K+ + ++ +G+ P+T VLH+V + K+++L +HSE+LA+AF L+ST T+RI
Sbjct: 899 HLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRI 958
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLR+C DCH +K I ++ ++E+VVRD FHHFK G CSC+++W
Sbjct: 959 FKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 172/662 (25%), Positives = 297/662 (44%), Gaps = 141/662 (21%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L Y+ +L++ + GK +H ++IK G++ L NSL+N YAK S +YA KVF
Sbjct: 128 LRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 187
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
E+P + + SW +++ + +G Y A+ +
Sbjct: 188 EIPERDVVSWTALITGFVAEG--------------------------YG-----SGAVNL 216
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F EM ++ V +FT + L +C+ DL GK+VH+ +K G + V ++L+++YAK
Sbjct: 217 FCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAK 276
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G+ ++A+ VF M +N V+WN+++ G+
Sbjct: 277 CGEMVLAERVFLCMPKQN-------------------------------AVSWNALLNGF 305
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+Q G + L +F M S + KFTL++ L CAN L+ G+ +H+ IR
Sbjct: 306 AQMGDAEKVLNLFCRM-TGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIR-----I 359
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
G + ISC L+D Y K G G A ++F +
Sbjct: 360 GCELDEFISC----------------------------CLVDMYSKCGLAGDALKVFVRI 391
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
D DVV+W+A++ +Q G +++A E+F+ M G PN +TL++++S ++ L L +G+
Sbjct: 392 EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE 451
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IHA + G +V NAL+TMY K G++ RVF R + +SW +++ +
Sbjct: 452 SIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR-DLISWNALLSGFHDN 510
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPS 551
+ +++F +ML G P+ T++ +L +C+ V+ G++ + ++KN +
Sbjct: 511 ETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN--SLDGNDF 568
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW-------------------------- 585
++VD+ + L++A I N ++ D+ AW
Sbjct: 569 VGTALVDMYAKNRFLEDAET-IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE 627
Query: 586 ---------GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG---AYSALCNLYSSCGKWE 633
S LS C LD G+ + I+ SG SAL ++Y+ CG E
Sbjct: 628 GVKPNEFTLASSLSGCSRIATLDSGRQLHS--MAIKAGQSGDMFVASALVDMYAKCGCVE 685
Query: 634 DA 635
DA
Sbjct: 686 DA 687
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/745 (36%), Positives = 420/745 (56%), Gaps = 95/745 (12%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+FN + +++W ++I Y G ++ F+ M+ + P SVL +C L D
Sbjct: 64 LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMD 123
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK----------------VGDEMMAKAVF- 203
L+ G+ +H ++++ GL + N+L+NMY+K V DEM +
Sbjct: 124 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSV 183
Query: 204 ---------DGMRLKNVSSWNVVVS----------LHI---------------------- 222
G ++ ++ ++N VS L I
Sbjct: 184 RTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKD 243
Query: 223 --HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
HS +D R F+ M E+D+V+WN++IAG ++NG E L M M ++LKPD FT
Sbjct: 244 ISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREM-GGANLKPDSFT 302
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L+S L A + GK+IH IR DA V ++LI YAK
Sbjct: 303 LSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKC-------------- 348
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
T ++D Y R+F L +RD ++W +++ G QNGL + ++ F
Sbjct: 349 ---------TRVVDSY----------RVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFF 389
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
R M+ KP +Y+ S+++ + L +L GKQ+H R+G ++ ++++L+ MY+K
Sbjct: 390 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 449
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
GNI AR++F+ + R + VSWT+MI+ A HG +AI+LFE+M GI+P+++ ++ V
Sbjct: 450 GNIRTARQIFDRMRLR-DMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAV 508
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
LTAC+H GLV++ +Y+N M I P H+A++ DLLGRAG L+EAY+FI MP+ P
Sbjct: 509 LTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGP 568
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
W +LLSACRVHKN+D+ + A ++L ++P N+GAY L N+YS+ +W++AA R
Sbjct: 569 TGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWRA 628
Query: 641 SMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTAS 700
S++ G++KT SW++++NKV+ F D HP + I M + + +++ G+VPDT+
Sbjct: 629 SLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTSE 688
Query: 701 VLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVD 760
V HDVEE+ K+ ++ HSE+LAI FG+I+TP TT+R+ KNLRVC DCH+A KFI K+V
Sbjct: 689 VHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIVG 748
Query: 761 REIVVRDATRFHHFKKGLCSCRDYW 785
REIVVRD +RFHHFK G CSC DYW
Sbjct: 749 REIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 232/570 (40%), Gaps = 135/570 (23%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ S L+ A L+ NL G+ +H II+ GL ++ N+LMN Y+K
Sbjct: 106 PDHNVFPSVLKACAMLMDLNL-------GESLHGYIIRVGLDFDLYTGNALMNMYSKLRF 158
Query: 64 ISY-------AKKVFDEMPVKTLCSWNTILSAYAKQGR---------LDLAC-------- 99
+ A +V DEM +T S T QGR D++C
Sbjct: 159 LKKSGRQRLGASQVLDEMTERTR-SVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQ 217
Query: 100 -------------------------------------EVFNLMPNRDSVSWTTIIVTYNE 122
++F +MP +D VSW TII
Sbjct: 218 VLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNAR 277
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G + + M EM + P FT++SVL D+S GK++H ++ GL V V
Sbjct: 278 NGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYV 337
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+SL++MYAK + + VF + ++ SWN
Sbjct: 338 ASSLIDMYAKCTRVVDSYRVFTLLTERDGISWN--------------------------- 370
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
S+IAG QNG E L F ML + +KP ++ +S + ACA+L L LGKQ+H
Sbjct: 371 ----SIIAGCVQNGLFDEGLKFFRQMLM-AKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 425
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
YI R FD + ++L+ YAK G +I
Sbjct: 426 YITRNGFDENIFIASSLVDMYAKCG---------------------------------NI 452
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
AR+IFD +R RD+V+WTAM++G +G DA+ELF M EG +PN A+L+
Sbjct: 453 RTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTAC 512
Query: 423 SSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S +D K ++ L G A + A+ + +AG + A +
Sbjct: 513 SHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSV 572
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIK 511
W +++ A H + A ++ R+LE+ K
Sbjct: 573 WATLLSACRVHKNVDMAEKVANRILEVDPK 602
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 137/337 (40%), Gaps = 50/337 (14%)
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y I + + R+F++L +AW +++ Y +GL ++ F M+ G P++
Sbjct: 52 YSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVF 111
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN-------AARR 468
++L + L L+ G+ +H +R G L NAL+ MYSK + A +
Sbjct: 112 PSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQ 171
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE------------RMLELGIKPDHIT 516
V + + R +V S++V G I+ F ++LE+ KP +
Sbjct: 172 VLDEMTERTRSVRTASVLV--GNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPR--S 227
Query: 517 YVGVLTAC---------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+ AC +H V+ ++ + MM + + +++ R GL
Sbjct: 228 EYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVS-----WNTIIAGNARNGLYG 282
Query: 568 EAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAY--SA 621
E + M L+PD S+L + +N+D+ K I ++ Y S+
Sbjct: 283 ETLTMVREMGGANLKPDSFTLSSVLPL--IAENVDISKGKEIHGCSIRQGLDAEVYVASS 340
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
L ++Y+ C + D+ + + + + G SW I
Sbjct: 341 LIDMYAKCTRVVDSYRV-----FTLLTERDGISWNSI 372
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/758 (36%), Positives = 432/758 (56%), Gaps = 71/758 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ F + + + YA VF+ + L WNT+ +
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A+ ++V M+ +LP +T
Sbjct: 64 AL---------------SSDPVS----------------ALYLYVCMISLGLLPNCYTFP 92
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L SC G+++H V+K G + V SL++MY + G A+ VFD +
Sbjct: 93 FLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR 152
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ +++ + G + A+ FD++ +DVV+WN+MI+GY++ G + EAL +F M+
Sbjct: 153 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 212
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K ++++PD+ T+ S +SACA ++LG+Q+H++I F + + NALI
Sbjct: 213 K-TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI--------- 262
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
D YIK G++ A +F+ L +DV++W ++ GY
Sbjct: 263 ------------------------DLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 298
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN+ T+ ++L + L +++ G+ IH + G A++
Sbjct: 299 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 358
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S +LI MY+K G+I AA++VF+ I R + SW +MI A HG A +F RM +
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS-SWNAMIFGFAMHGRANAAFDIFSRMRK 417
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
I+PD IT+VG+L+AC+H G+++ G+ + MK +KI P H+ M+DLLG +GL +
Sbjct: 418 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 477
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I M +EPD V W SLL AC++H N++LG+ A+ L+ IEP N G+Y L N+Y+
Sbjct: 478 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYA 537
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G+W + A IR + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 538 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 597
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++E GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 598 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 657
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH A K I K+ REI+ RD TRFHHF+ G+CSC DYW
Sbjct: 658 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 230/495 (46%), Gaps = 79/495 (15%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G L +++ SL++ Y + + A+KVFD+
Sbjct: 91 FPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSS 150
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G + A ++F+ +P +D VSW +I Y E G K A+ +F E
Sbjct: 151 HRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKE 210
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ SV+++C + G++VHS++ G + + N+L+++Y K G+
Sbjct: 211 MMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 270
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+G+ K+V SW N++I GY+
Sbjct: 271 VETACGLFEGLSYKDVISW-------------------------------NTLIGGYTHM 299
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F ML+ S P+ T+ S L ACA+L +++G+ IH YI + V
Sbjct: 300 NLYKEALLLFQEMLR-SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR----LKGV 354
Query: 316 GNA------LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
NA LI YAK G +E AQ+ +F
Sbjct: 355 ANASSHRTSLIDMYAKCGDIEAAQQ---------------------------------VF 381
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
DS+ +R + +W AM+ G+ +G A ++F M + +P++ T +LS S LD
Sbjct: 382 DSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 441
Query: 430 HGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+ I S + + L +I + +G A + N + + V W S++ A
Sbjct: 442 LGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 501
Query: 489 LAQHG---LGEEAIQ 500
HG LGE Q
Sbjct: 502 CKMHGNVELGESYAQ 516
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/759 (35%), Positives = 431/759 (56%), Gaps = 73/759 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+L+HA++IK GLH + + + L+ + + + YA VF+ + L WNT+ +
Sbjct: 50 RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A++++V M+ +LP +T
Sbjct: 110 AL---------------SSDPVS----------------ALKLYVCMISLGLLPNSYTFP 138
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L SC G+++H V+K G + V SL+++Y + G A+ VFD +
Sbjct: 139 FLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHR 198
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ ++ + G ++ A+ FD++ +DVV+WN+MI+GY++ G EAL +F M+
Sbjct: 199 DVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMM 258
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K ++++PD+ T+ + +SACA ++LG+Q+H++I F +
Sbjct: 259 K-TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGS------------------ 299
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
N+ +L+D Y K G++ A +F+ L +DV++W ++ GY
Sbjct: 300 ---------------NLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTH 344
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA---SALRSGEASS 446
L K+A+ LF+ M+R G +PN+ T+ ++L + L ++D G+ IH L+S +S
Sbjct: 345 MNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS 404
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
S+ +LI MY+K G+I AA +VFN I + SW +MI A HG + A +F RM
Sbjct: 405 -SLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADAAFDIFSRMR 462
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
++GI+PD IT+VG+L+AC+ G+++ G+ + M +KI P H+ M+DLLG +GL
Sbjct: 463 KIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLF 522
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA I NM +EPD V W SLL AC++ N++LG+ A+ L+ IEP+N G Y L N+Y
Sbjct: 523 KEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIY 582
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G+W + A IR + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 583 ATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 642
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+++ GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC
Sbjct: 643 VLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCR 702
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+CH A K I K+ REI+ RD TRFHHF+ G+CSC DYW
Sbjct: 703 NCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 256/556 (46%), Gaps = 105/556 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G L +F+ SL++ Y + + A+KVFD P
Sbjct: 137 FPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSP 196
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ ++ YA +G ++ A ++F+ +P +D VSW +I Y E G +K A+ +F E
Sbjct: 197 HRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKE 256
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ + P + T+ +V+++C G + G++VHS++ G + + NSL+++Y+K G+
Sbjct: 257 MMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGE 316
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+G+ K+V SW N++I GY+
Sbjct: 317 LETACGLFEGLLYKDVISW-------------------------------NTLIGGYTHM 345
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT--G 313
EAL +F ML+ S +P+ T+ S L ACA+L + +G+ IH YI + AT
Sbjct: 346 NLYKEALLLFQEMLR-SGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS 404
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +LI YAK G DI A ++F+S+
Sbjct: 405 SLRTSLIDMYAKCG---------------------------------DIEAAHQVFNSIL 431
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+ + +W AM+ G+ +G A ++F M + G +P++ T +LS S LD G+
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRH 491
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
I + + + + L H + MI L G
Sbjct: 492 IFRTMTQDYKITP------------------------KLEH-------YGCMIDLLGHSG 520
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP-TPSH 552
L +EA ++ M ++PD + + +L AC G VE G+ + +N+ KI+P P
Sbjct: 521 LFKEAEEMINNM---EMEPDGVIWCSLLKACKIRGNVELGESF---AQNLIKIEPENPGC 574
Query: 553 FASMVDLLGRAGLLQE 568
+ + ++ AG E
Sbjct: 575 YVLLSNIYATAGRWNE 590
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 246/485 (50%), Gaps = 43/485 (8%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +C L L + +H+ ++KTGL + LL +
Sbjct: 38 SLLHNCKTLQSL---RLIHAQMIKTGLHNTNYALSKLLEL-------------------- 74
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
V+S H L A + F+ + E +++ WN+M G++ + AL ++ M+
Sbjct: 75 ------CVISPHFDG--LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI 126
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
L P+ +T L +CA + K G+QIH ++++ +D V +LIS Y + G +
Sbjct: 127 S-LGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRL 185
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E A+K+ ++S + +V+++T L+ GY G I A+++FD + +DVV+W AM+ GY +
Sbjct: 186 EDARKVFDRS--PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAE 243
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G K+A+ELF+ M++ +P+ T+ ++S + S++ G+Q+H+ G S+L +
Sbjct: 244 TGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKI 303
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N+L+ +YSK G + A +F + ++ + +SW ++I L +EA+ LF+ ML G
Sbjct: 304 VNSLMDLYSKCGELETACGLFEGLLYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+P+ +T + +L AC H G ++ G+ + + K + S S++D+ + G ++
Sbjct: 363 ERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEA 422
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEKLLLIEPDNSGAYSALCNLY 626
A+ + N L + +W +++ +H D + + + IEPD+ L
Sbjct: 423 AHQ-VFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDD----ITFVGLL 477
Query: 627 SSCGK 631
S+C +
Sbjct: 478 SACSR 482
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/770 (34%), Positives = 424/770 (55%), Gaps = 98/770 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A L+ + + G+ +HA + K G + + N+ + Y KT+S+ + F M
Sbjct: 93 FASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMM 152
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++ L S N +LS + D R+ ++
Sbjct: 153 IENLASRNNLLSGFCDTETCD-------------------------------QGPRILIQ 181
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
++ + P +T S+L +C + GDL+ GK +H V+K+G++ ++ NSL+N+YAK G
Sbjct: 182 LLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGS 241
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A V F ++ ERDVV+W ++I G+
Sbjct: 242 ANYACKV-------------------------------FGEIPERDVVSWTALITGFVAE 270
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
GY L +F ML + P+ +T S L +C++L + LGKQ+HA I++ D V
Sbjct: 271 GYG-SGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV 328
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G AL+ YAK + +E A IF+ L R
Sbjct: 329 GTALVDMYAK-------NRFLED--------------------------AETIFNRLIKR 355
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+ AWT ++ GY Q+G + AV+ F M REG KPN +TL++ LS S +A+LD G+Q+H
Sbjct: 356 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 415
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ A+++G++ + V++AL+ MY+K G + A VF+ + R +TVSW ++I +QHG G
Sbjct: 416 SMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSR-DTVSWNTIICGYSQHGQG 474
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A++ FE ML+ G PD +T++GVL+AC+H GL+E+G++++N + ++ I PT H+A
Sbjct: 475 GKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYAC 534
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVD+LGRAG E +FIE M L +V+ W ++L AC++H N++ G+ AA KL +EP+
Sbjct: 535 MVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEI 594
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
Y L N++++ G W+D N+R M GVKK G SWV++ +VHVF D HP+
Sbjct: 595 DSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKI 654
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
I+ K+ + ++ +G+ P+T VLH+V + K+++L +HSE+LA+AF L+ST T
Sbjct: 655 REIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKT 714
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLR+C DCH +K I ++ ++E+VVRD FHHFK G CSC+++W
Sbjct: 715 IRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/677 (38%), Positives = 398/677 (58%), Gaps = 44/677 (6%)
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
S++W II Y G ++++ F + + P + S+L + T + + +H+
Sbjct: 41 SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
V++ G + N+L+NMY+K + F R + + ++V ++D
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSV---------KIDS 151
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
R FD+M RDVV+WN++IAG +QNG EAL M M K++ L+PD FTL+S L
Sbjct: 152 VRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKEN-LRPDSFTLSSILPIFT 210
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ GK+IH Y IR FD +G++LI YAK VE L+V AF
Sbjct: 211 EHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVE-------------LSVCAF 257
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
L +RD ++W +++ G QNG + FR M++E K
Sbjct: 258 HLL--------------------SNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVK 297
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P + S+++ + L +L+ GKQ+HA +R G + ++++L+ MY+K GNI AR +
Sbjct: 298 PMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYI 357
Query: 470 FNLIHW-RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
FN I ++ VSWT++I+ A HG +A+ LFE ML G+KP ++ ++ VLTAC+H G
Sbjct: 358 FNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAG 417
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LV++G +Y+N M+ + P H+A++ DLLGRAG L+EAY+FI NM EP W +L
Sbjct: 418 LVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTL 477
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L+ACR HKN++L + K+LL++P N GA+ + N+YS+ +W DAA +R M+ G+K
Sbjct: 478 LAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLK 537
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
KT SW+++ NKVH F D HP D I + + +++++ G+V DT VLHDV+E+
Sbjct: 538 KTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEE 597
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
K +LR HSE+LAIAFG+IST TT+R++KN+RVC DCH+AIKF+ K+V REI+VRD
Sbjct: 598 HKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDN 657
Query: 769 TRFHHFKKGLCSCRDYW 785
+RFHHFK G CSC DYW
Sbjct: 658 SRFHHFKNGSCSCGDYW 674
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 228/496 (45%), Gaps = 81/496 (16%)
Query: 18 HLLQSNLKSRNPF----VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
HL S L++ F + + +HA +I+ G H ++ N+LMN Y+K E
Sbjct: 77 HLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHP---HLSPLHE 133
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
P + + N S ++D ++F+ MP RD VSW T+I + G ++ A+ M
Sbjct: 134 FP-QARHNHNNKYSV-----KIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMV 187
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
EM ++ + P FT++S+L T +++ GK++H + ++ G V + +SL++MYAK
Sbjct: 188 KEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKC 247
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
++ F + ++ SWN +++ + +GR D
Sbjct: 248 TQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFD------------------------- 282
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+ LG F MLK+ +KP + + +S + ACA+L L LGKQ+HAYIIR FD
Sbjct: 283 ------QGLGFFRRMLKE-KVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNK 335
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ ++L+ YAK G +++ AR IF+ +
Sbjct: 336 FIASSLLDMYAKCGNIKM---------------------------------ARYIFNKIE 362
Query: 374 --DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
DRD+V+WTA+++G +G DAV LF M+ +G KP A+L+ S +D G
Sbjct: 363 MCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEG 422
Query: 432 KQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
+ S R G A L A+ + +AG + A + + W++++ A
Sbjct: 423 WKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACR 482
Query: 491 QHGLGEEAIQLFERML 506
H E A ++ ++L
Sbjct: 483 AHKNIELAEKVVNKIL 498
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/683 (38%), Positives = 395/683 (57%), Gaps = 69/683 (10%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
MP R+ VSWT +I ++ +F AIR F M +PTQF +S + +C +LG + G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
K++H +K G+ + V ++L +MY+K G A+FD ++
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCG------AMFDACKV---------------- 98
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
F++M +D V+W +MI GYS+ G EAL F M+ D + D+ L ST
Sbjct: 99 ---------FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMI-DEEVTIDQHVLCST 148
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L AC L+ K G+ +H+ +++ F++ VGNAL
Sbjct: 149 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT------------------------ 184
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIF--DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
D Y K GD+ A +F DS R+VV++T ++ GY + + + +F
Sbjct: 185 ---------DMYSKAGDMESASNVFGIDS-ECRNVVSYTCLIDGYVETEQIEKGLSVFVE 234
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
+ R+G +PN +T S+++ ++ A+L+ G Q+HA ++ VS+ L+ MY K G
Sbjct: 235 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 294
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A + F+ I E ++W S++ QHGLG++AI++FERM++ G+KP+ IT++ +LT
Sbjct: 295 LEQAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLT 353
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
C+H GLVE+G Y+ M + + P H++ ++DLLGRAG L+EA FI MP EP+
Sbjct: 354 GCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNA 413
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
W S L ACR+H + ++GK+AAEKL+ +EP NSGA L N+Y++ +WED ++R M
Sbjct: 414 FGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRM 473
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ VKK G+SWV + K HVFG EDW HP++ AIY K+ + D+IK G+VP T SV
Sbjct: 474 RDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVP 533
Query: 703 HDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDRE 762
D+++ +KE++L HSE++A+AF LIS P + + KNLRVC DCHSAIKFI K+ R+
Sbjct: 534 LDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRK 593
Query: 763 IVVRDATRFHHFKKGLCSCRDYW 785
I+VRD +RFHHF G CSC DYW
Sbjct: 594 IIVRDNSRFHHFTDGSCSCGDYW 616
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 194/421 (46%), Gaps = 65/421 (15%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y+K G + AC+VF MP +D VSWT +I Y++IG F+ A+ F +M+ ++V Q +
Sbjct: 86 YSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 145
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
S L +C AL G+ VHS VVK G + V N+L +MY+K GD A VF G+
Sbjct: 146 CSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF-GIDS 204
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+ R+VV++ +I GY + + L +F
Sbjct: 205 EC-----------------------------RNVVSYTCLIDGYVETEQIEKGLSVFVE- 234
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L+ ++P++FT +S + ACAN L+ G Q+HA +++ FD V + L+ Y K G
Sbjct: 235 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCG- 293
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++EQ A + FD + D +AW +++ +
Sbjct: 294 ------LLEQ--------------------------AIQAFDEIGDPTEIAWNSLVSVFG 321
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSL 447
Q+GL KDA+++F MV G KPN T ++L+ S ++ G S ++ G
Sbjct: 322 QHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGE 381
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ +I + +AG + A+ N + + W S + A HG E E++++
Sbjct: 382 EHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVK 441
Query: 508 L 508
L
Sbjct: 442 L 442
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV----- 70
Y L+ +++ G V + + G+ + F +SL+ A ++ ++
Sbjct: 212 YTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVM 271
Query: 71 ---FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
FDE P + + ++ Y K G L+ A + F+ + + ++W +++ + + G K
Sbjct: 272 KINFDEDPFVS----SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGK 327
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
+AI++F MV V P T S+L C+ G + G
Sbjct: 328 DAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 364
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 281/840 (33%), Positives = 442/840 (52%), Gaps = 136/840 (16%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L Q + R+ +GK V II+ G L+++ N+L+ Y+ +++ A+
Sbjct: 60 YVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEAR------- 112
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++F+ + N+ V+W +I Y ++G K A +F +
Sbjct: 113 ------------------------QIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQ 148
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM------ 189
MV + + P+ T SVL +C++ L+ GK+VH+ VV G + +L++M
Sbjct: 149 MVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGS 208
Query: 190 -------------------------YAKVGD-----EMMAK--------------AVFDG 205
YAK GD E+ + ++ DG
Sbjct: 209 MDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDG 268
Query: 206 MRLKNVSSWN--------------------VVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
+W ++ ++ G ++ AR FD M RDVV+W
Sbjct: 269 CWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSW 328
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
MI GY++NG +A G+FA M ++ ++PD+ T ++ACA L ++IH
Sbjct: 329 TVMIEGYAENGNIEDAFGLFATM-QEEGIQPDRITYMHIMNACAISANLNHAREIH---- 383
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
++ D G + L+S T L+ Y K G I A
Sbjct: 384 -SQVDIAGFGTDLLVS----------------------------TALVHMYAKCGAIKDA 414
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R++FD++ RDVV+W+AM+ Y +NG +A E F M R +P+ T +L+ L
Sbjct: 415 RQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHL 474
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
+LD G +I+ A+++ S + + NALI M +K G++ AR +F+ + R++ ++W +M
Sbjct: 475 GALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAM 533
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I + HG EA+ LF+RML+ +P+ +T+VGVL+AC+ G V++G+R++ +
Sbjct: 534 IGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRG 593
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I PT + MVDLLGRAG L EA I++MP++P W SLL ACR+H NLD+ + AA
Sbjct: 594 IVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAA 653
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
E+ L+I+P + Y L ++Y++ G WE+ A +RK M+ G++K QG +W+++ KVH F
Sbjct: 654 ERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTF 713
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
VED HP IY ++A++ + IK G++P T +VLHDV E KE+ + +HSEKLAIA+
Sbjct: 714 VVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAY 773
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
G++S P T +RI KNLRVC+DCHSA KFI K+ REI+ RDA+RFHHFK G+CSC DYW
Sbjct: 774 GVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 223/489 (45%), Gaps = 80/489 (16%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T + CT L D + GK+V +++ G + N+L+ +Y+ G+ A+ +FD +
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
K V +WN +++ GY+Q G+ EA +F
Sbjct: 119 ENKTVVTWNALIA-------------------------------GYAQVGHVKEAFALFR 147
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M+ D L+P T S L AC++ L GK++HA ++ F + +G AL+S Y K
Sbjct: 148 QMV-DEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKG 206
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G ++ A+++ + G+ +V F ++ GY K GD W
Sbjct: 207 GSMDDARQVFD--GLHIRDVSTFNVMVGGYAKSGD------------------W------ 240
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+ A ELF M + G KPN + ++L + +L GK +HA + +G
Sbjct: 241 -------EKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD 293
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V+ +LI MY+ G+I ARRVF+ + R + VSWT MI A++G E+A LF M
Sbjct: 294 IRVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNIEDAFGLFATMQ 352
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
E GI+PD ITY+ ++ AC + + ++ + ++ ++V + + G +
Sbjct: 353 EEGIQPDRITYMHIMNACAISANLNHAREIHSQV-DIAGFGTDLLVSTALVHMYAKCGAI 411
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL-----IEPDNSGAYSA 621
++A + MP DVV+W +++ A + G A E L IEPD
Sbjct: 412 KDARQVFDAMP-RRDVVSWSAMIGA---YVENGYGTEAFETFHLMKRSNIEPDG----VT 463
Query: 622 LCNLYSSCG 630
NL ++CG
Sbjct: 464 YINLLNACG 472
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 401/703 (57%), Gaps = 66/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++L Y K G ++ A ++FNL + V W ++V Y +I + +F +M +
Sbjct: 284 GSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIH 343
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT +L +CT G + G+++HS +K G + V+ L++MY+K
Sbjct: 344 PNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRC------- 396
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LD AR + + +RDVV+W SMIAGY Q+ + EAL
Sbjct: 397 ------------------------LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M +D + PD LAS SACA ++ ++ G QIHA + + + A + N L++
Sbjct: 433 ATFKEM-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNL 491
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G E A +F + +D + W
Sbjct: 492 YARCGRSE---------------------------------EAFSLFREIDHKDEITWNG 518
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ Q+ L + A+ +F M + G K N +T + +S ++LA + GKQ+H A+++G
Sbjct: 519 LISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTG 578
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S V+NALI++Y K G+I A+ +F+ + R E VSW ++I + +QHG G EA+ LF
Sbjct: 579 HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE-VSWNTIITSCSQHGRGLEALDLF 637
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + G+KP+ +T++GVL AC+H GLVE+G Y+ M NV+ + P P H+A +VD+LGR
Sbjct: 638 DQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGR 697
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A F++ MP+ + + W +LLSAC+VHKN+++G++AA+ LL +EP +S +Y L
Sbjct: 698 AGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLL 757
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N Y+ GKW + +RK MK G++K G SW++++N VH F V D LHP D IY +
Sbjct: 758 SNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFL 817
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+++ D + ++G+ + ++ H+ E++ K+ HSEKLA+AFGL++ P LR++KNL
Sbjct: 818 SELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNL 877
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC+DCHS +KF ++ REIV+RD RFHHF G CSC DYW
Sbjct: 878 RVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 235/510 (46%), Gaps = 70/510 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G + A +VF + +RD VSW ++ Y + G K A R++ +M V+
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + ++SVL++CT + G+ +H+ V K V N+L+ +Y G +A+ V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M + ++N ++S H G + A FD+M
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEM------------------------- 236
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ S L+PD T+AS L+ACA++ L+ GKQ+H+Y+++ +L+
Sbjct: 237 -------QLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDL 289
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWT 381
Y K G +E A I +L DR +VV W
Sbjct: 290 YVKCGDIETAHDIF----------------------------------NLGDRTNVVLWN 315
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
MLV Y Q + E+F M G PN +T +L + ++ G+QIH+ ++++
Sbjct: 316 LMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKN 375
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S + VS LI MYSK ++ AR++ ++ +++ VSWTSMI QH EEA+
Sbjct: 376 GFESDMYVSGVLIDMYSKYRCLDKARKILEMLE-KRDVVSWTSMIAGYVQHDFCEEALAT 434
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + G+ PD+I +AC + QG + + + V S + ++V+L
Sbjct: 435 FKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY-VSGYAADISIWNTLVNLYA 493
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
R G +EA++ + D + W L+S
Sbjct: 494 RCGRSEEAFSLFREID-HKDEITWNGLISG 522
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 225/486 (46%), Gaps = 76/486 (15%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
E+ A +V G+ + N+++ L+ +G + AR F ++ RD V+W +M++GY+Q
Sbjct: 64 EIHATSVVRGLGADRLIG-NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA +++ M +++ P + L+S LSAC + G+ IHA + + F + V
Sbjct: 123 GLGKEAFRLYSQM-HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNALI+ Y G ++A+++ + + + + F TL+ G
Sbjct: 182 GNALIALYLGFGSFKLAERVF--CDMLFCDRVTFNTLISG-------------------- 219
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ Q G + A+++F M G +P+ T++++L+ +S+ L GKQ+H
Sbjct: 220 -----------HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLH 268
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ L++G + +L+ +Y K G+I A +FNL R V W M+VA Q
Sbjct: 269 SYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD-RTNVVLWNLMLVAYGQISDL 327
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFA 554
++ ++F +M GI P+ TY +L CT G +E G++ +++ +KN + S
Sbjct: 328 AKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS--G 385
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEKLLLIE 612
++D+ + L +A +E M + DVV+W S+++ H + L + +
Sbjct: 386 VLIDMYSKYRCLDKARKILE-MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW 444
Query: 613 PDNSGAYSA----------------------------------LCNLYSSCGKWEDAANI 638
PDN G SA L NLY+ CG+ E+A ++
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSL 504
Query: 639 RKSMKY 644
+ + +
Sbjct: 505 FREIDH 510
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 156/335 (46%), Gaps = 50/335 (14%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
WNT+++ YA+ GR + A +F + ++D ++W +I + + ++ A+ +F++M Q
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGA 544
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
FT S +++ L D+ GK+VH VKTG + V N+L+++Y K G AK
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F M L+N SWN + I SQ+G EA
Sbjct: 605 IFSEMSLRNEVSWNTI-------------------------------ITSCSQHGRGLEA 633
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN---A 318
L +F M K LKP+ T L+AC+++ ++ G + + + P+ +
Sbjct: 634 LDLFDQM-KQEGLKPNDVTFIGVLAACSHVGLVEEG--LSYFKSMSNVYGLNPIPDHYAC 690
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY-----IKIGDIGPARRIFDSLR 373
++ + G ++ A++ V++ I+ N + + TLL I+IG++ A+ + + L
Sbjct: 691 VVDILGRAGQLDRARRFVDEMPIT-ANAMIWRTLLSACKVHKNIEIGELA-AKHLLE-LE 747
Query: 374 DRDVVAWTAMLVGYEQNG--LNKDAVELFRSMVRE 406
D ++ + Y G N+D V R M+++
Sbjct: 748 PHDSASYVLLSNAYAVTGKWANRDQV---RKMMKD 779
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 66/223 (29%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH R +K G + N+L++ Y K SI AK +F EM ++ SWNTI+++ ++
Sbjct: 567 GKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQ 626
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR A+ +F +M Q+ + P T V
Sbjct: 627 H-------------------------------GRGLEALDLFDQMKQEGLKPNDVTFIGV 655
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA--KVGDEMMAKAVFDGMRLK 209
LA+C+ +G +V+ GLS S+ N+Y + D
Sbjct: 656 LAACSHVG-----------LVEEGLS----YFKSMSNVYGLNPIPDH------------- 687
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQM-IERDVVTWNSMIAG 251
+ VV + +G+LD AR D+M I + + W ++++
Sbjct: 688 ----YACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/736 (36%), Positives = 426/736 (57%), Gaps = 52/736 (7%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N+ + A+ +I A+ F+ MP++T S+N +L+ Y + D A +F MP+RD
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
S+ +I + ++ Q LP + AL + V SF
Sbjct: 81 SYNALISGLS---------------LRRQTLPD---------AAAALASIPFPPSVVSF- 115
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
SLL Y + G A +F M +N S+ V++ + +GR++ AR
Sbjct: 116 ------------TSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEAR 163
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M +RDVV W +M++GY Q G EA +F M K + + + + +S A
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV-----SWTAMISGYAQN 218
Query: 292 EKLKLGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ L +++ + R E T A++ Y + G VE A ++ + + V A
Sbjct: 219 GEVNLARKLFEVMPERNEVSWT-----AMLVGYIQAGHVEDAAELF--NAMPEHPVAACN 271
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
++ G+ + G + A+ +F+ + +RD W+AM+ YEQN +A+ FR M+ G +P
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
N ++ ++L+V ++LA LD+G+++HA+ LR + +ALITMY K GN++ A+RVF
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ ++ V W SMI AQHGLGE+A+ +F M G+ PD ITY+G LTAC++ G V
Sbjct: 392 HTFE-PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV 450
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
++G+ +N M I+P H++ MVDLLGR+GL++EA++ I+NMP+EPD V WG+L+
Sbjct: 451 KEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMG 510
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
ACR+H+N ++ + AA+KLL +EP N+G Y L ++Y+S G+WEDA+ +RK + + K+
Sbjct: 511 ACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKS 570
Query: 651 QGFSWVQIQNKVHVFGVEDWL-HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G SW++ +VH+F D L HP+ AI + K+ + E G+ D + VLHD++E+
Sbjct: 571 PGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQ 630
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
K LR+HSE+ A+A+GL+ PE +R+MKNLRVC DCHSAIK I K+ REI++RDA
Sbjct: 631 KSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDAN 690
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHFK G CSCRDYW
Sbjct: 691 RFHHFKDGFCSCRDYW 706
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 221/478 (46%), Gaps = 76/478 (15%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV SL+ Y + ++ A ++F +MP + S+ +L GR++ A +F+ MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+RD V+WT ++ Y + GR A +F EM + V+ + T++++ G+++ +K
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV----SWTAMISGYAQNGEVNLARK 226
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+ + + V+ T L+ Y + G A +F+ M V++ N ++ G
Sbjct: 227 LFEVMPERNE---VSWTAMLVG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+D A+ F++M ERD TW++MI Y QN + EAL F ML ++P+ ++ S L+
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLW-RGVRPNYPSVISILT 341
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
CA L L G+++HA ++R FD +ALI+ Y
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY----------------------- 378
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
IK G++ A+R+F + +D+V W +M+ GY Q+GL + A+ +F M
Sbjct: 379 ----------IKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLA 428
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G P+ T L+ S + G++I +S++V++++
Sbjct: 429 GMSPDGITYIGALTACSYTGKVKEGREIF---------NSMTVNSSI------------- 466
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
R ++ M+ L + GL EEA L + M ++PD + + ++ AC
Sbjct: 467 ---------RPGAEHYSCMVDLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGAC 512
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN PS+IS L A L + G+ VHA +++C + VF ++L+ Y K +
Sbjct: 331 PNYPSVISILTVCAALAVLDY-------GREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTIIVT 119
+ AK+VF K + WN++++ YA+ G + A +F+ M + D +++ +
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443
Query: 120 YNEIGRFKNAIRMFVEM-VQDQVLP 143
+ G+ K +F M V + P
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRP 468
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/758 (36%), Positives = 432/758 (56%), Gaps = 71/758 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ F + + + YA VF+ + L WNT+ +
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A+ ++V M+ +LP +T
Sbjct: 79 AL---------------SSDPVS----------------ALYLYVCMISLGLLPNCYTFP 107
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L SC G+++H V+K G + V SL++MY + G A+ VFD +
Sbjct: 108 FLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR 167
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ +++ + G + A+ FD++ +DVV+WN+MI+GY++ G + EAL +F M+
Sbjct: 168 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 227
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K ++++PD+ T+ S +SACA ++LG+Q+H++I F + + NALI
Sbjct: 228 K-TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI--------- 277
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
D YIK G++ A +F+ L +DV++W ++ GY
Sbjct: 278 ------------------------DLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 313
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN+ T+ ++L + L +++ G+ IH + G A++
Sbjct: 314 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANAS 373
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S +LI MY+K G+I AA++VF+ I R + SW +MI A HG A +F RM +
Sbjct: 374 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS-SWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
I+PD IT+VG+L+AC+H G+++ G+ + MK +KI P H+ M+DLLG +GL +
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I M +EPD V W SLL AC+++ N++LG+ A+ L+ IEP N G+Y L N+Y+
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYA 552
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G+W + A IR + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 553 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++E GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH A K I K+ REI+ RD TRFHHF+ G+CSC DYW
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/560 (26%), Positives = 251/560 (44%), Gaps = 113/560 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G L +++ SL++ Y + + A+KVFD+
Sbjct: 106 FPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSS 165
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G + A ++F+ +P +D VSW +I Y E G K A+ +F E
Sbjct: 166 HRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKE 225
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ SV+++C + G++VHS++ G + + N+L+++Y K G+
Sbjct: 226 MMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+G+ K+V SW N++I GY+
Sbjct: 286 VETACGLFEGLSYKDVISW-------------------------------NTLIGGYTHM 314
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F ML+ S P+ T+ S L ACA+L +++G+ IH YI + V
Sbjct: 315 NLYKEALLLFQEMLR-SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR----LKGV 369
Query: 316 GNA------LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
NA LI YAK G +E AQ+ +F
Sbjct: 370 ANASSHRTSLIDMYAKCGDIEAAQQ---------------------------------VF 396
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
DS+ +R + +W AM+ G+ +G A ++F M + +P++ T +LS S LD
Sbjct: 397 DSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 456
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G+ I S + + L H + MI L
Sbjct: 457 LGRHIFRSMKEDYKITP------------------------KLEH-------YGCMIDLL 485
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP- 548
GL +EA ++ M ++PD + + +L AC VE G+ Y +N+ KI+P
Sbjct: 486 GHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMYANVELGESY---AQNLIKIEPK 539
Query: 549 TPSHFASMVDLLGRAGLLQE 568
P + + ++ AG E
Sbjct: 540 NPGSYVLLSNIYATAGRWNE 559
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/703 (37%), Positives = 407/703 (57%), Gaps = 66/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++L Y K G + A E+F + V W ++V Y +I + +F +MV V
Sbjct: 283 GSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVR 342
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT +L +CT G+++ G+++H +KTG + V+ L++MY+K G
Sbjct: 343 PNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYG-------- 394
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
W LD AR + + +DVV+W SMIAGY Q+ + EAL
Sbjct: 395 -----------W------------LDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEAL 431
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F +M + + PD LAS +SACA ++ ++ G+QIH+ + + + A + NAL++
Sbjct: 432 ETFKDM-QLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNL 490
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G + A +F+++ +D + W
Sbjct: 491 YARCGRSK---------------------------------EAFSLFEAIEHKDKITWNG 517
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G+ Q+GL ++A+E+F M + G K N +T + +S S++LA + GKQIHA+ +++G
Sbjct: 518 MVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTG 577
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S V+NALI++Y K G+I A+ F + R VSW ++I + +QHG G EA+ LF
Sbjct: 578 CTSETEVANALISLYGKCGSIEDAKMQFFEMSERNH-VSWNTIITSCSQHGWGLEALDLF 636
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + G+KP+ +T++GVL AC+H GLVE+G Y+ M + H I P P H+A +VD+LGR
Sbjct: 637 DQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGR 696
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A F+E MP+ + + W +LLSACRVHKN+++G++AA+ LL +EP +S +Y L
Sbjct: 697 AGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLL 756
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N Y+ GKW ++RK MK GV+K G SW++++N VH F V D LHP IY +
Sbjct: 757 SNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYL 816
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
A + D + ++G++ + H+ E++ K+ HSEKLA+AFGL+S P + LR++KNL
Sbjct: 817 ADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNL 876
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVCNDCH+ +KF +++ REIV+RD RFHHF G CSC D+W
Sbjct: 877 RVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 172/658 (26%), Positives = 287/658 (43%), Gaps = 124/658 (18%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK+G + A VF + RD+VSW ++ Y G + A+ ++ +M V+
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + ++SVL++CT G+ VH+ V K G V N+L+ +Y + G +A+ V
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M + ++N ++S H G + A F++M
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEM------------------------- 235
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ S PD T+AS L+ACA++ L GKQ+H+Y+++
Sbjct: 236 -------RLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLK---------------- 272
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+G+S +I +LLD Y+K G I A IF S +VV W
Sbjct: 273 ----------------AGMSPDYIIE-GSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNL 315
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
MLV Y Q + +LF MV G +PN +T +L + ++ G+QIH ++++G
Sbjct: 316 MLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTG 375
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + VS LI MYSK G ++ ARR+ ++ ++ VSWTSMI QH +EA++ F
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLDKARRILEVLE-AKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M GI PD+I ++AC + QGQ+ ++ + V S + ++V+L R
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVY-VSGYSADVSIWNALVNLYAR 493
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSA------------------------------C 592
G +EA++ E + D + W ++S
Sbjct: 494 CGRSKEAFSLFEAIE-HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVS 552
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYS------ALCNLYSSCGKWEDAANIRKSMKYVG 646
+ + +L I K + +G S AL +LY CG EDA M++
Sbjct: 553 SISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDA-----KMQFFE 607
Query: 647 VKKTQGFSWVQIQNKV--HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ + SW I H +G+E ++D++K+ G P+ + +
Sbjct: 608 MSERNHVSWNTIITSCSQHGWGLE-------------ALDLFDQMKQEGLKPNDVTFI 652
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 208/485 (42%), Gaps = 98/485 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF Y LL++ + +G+ +H IK G +++ L++ Y+K + A+
Sbjct: 341 VRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKAR 400
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
++ + + K + SW ++++ Y + K
Sbjct: 401 RILEVLEAKDVVSWTSMIAGYVQHEFC-------------------------------KE 429
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ F +M + P + S +++C + + G+++HS V +G S V++ N+L+N
Sbjct: 430 ALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVN 489
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+YA+ G A ++F+ + K+ +WN M
Sbjct: 490 LYARCGRSKEAFSLFEAIEHKDKITWN-------------------------------GM 518
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
++G++Q+G EAL +F M + + +K + FT S++SA ANL +K GKQIHA +I+T
Sbjct: 519 VSGFAQSGLYEEALEVFIKMYQ-AGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTG 577
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ V NALIS Y K G +E A+
Sbjct: 578 CTSETEVANALISLYGKCGSIE---------------------------------DAKMQ 604
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +R+ V+W ++ Q+G +A++LF M +EG KPN+ T +L+ S + +
Sbjct: 605 FFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 664
Query: 429 DHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ G S + G ++ + +AG ++ AR+ + + W +++
Sbjct: 665 EEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLS 724
Query: 488 ALAQH 492
A H
Sbjct: 725 ACRVH 729
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 7/247 (2%)
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
IA L+D Y K G + ARR+F+ L RD V+W AML GY +NGL ++AV L+ M
Sbjct: 78 IAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCS 137
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G P Y LS++LS + A + G+ +HA + G S V NALI +Y + G+++ A
Sbjct: 138 GVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLA 197
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
RVF+ + + + V++ ++I AQ G GE A+++FE M G PD +T +L AC
Sbjct: 198 ERVFSEMPY-CDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACAS 256
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
G + +G++ ++ + K +P + S++DL + G++ EA ++ +VV
Sbjct: 257 IGDLNKGKQLHSYLL---KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD-RTNVVL 312
Query: 585 WGSLLSA 591
W +L A
Sbjct: 313 WNLMLVA 319
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 105/248 (42%), Gaps = 47/248 (18%)
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IHA A+ G N LI +Y+K G + ARRVF + R + VSW +M+ A++G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSAR-DNVSWVAMLSGYARNG 122
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG-------------------- 533
LGEEA+ L+ +M G+ P VL+ACT L EQG
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182
Query: 534 ---------------QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
+R ++ M ++ F +++ + G + A E M L
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDRVT-----FNTLISRHAQCGNGESALEIFEEMRL 237
Query: 579 E---PDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSSCGKWE 633
PD V SLL+AC +L+ GK LL + PD +L +LY CG
Sbjct: 238 SGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYI-IEGSLLDLYVKCGVIV 296
Query: 634 DAANIRKS 641
+A I KS
Sbjct: 297 EALEIFKS 304
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/708 (37%), Positives = 419/708 (59%), Gaps = 43/708 (6%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL S ++S++ + +HARIIK +F++N L++ Y K A+KVFD MP
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ S+N +LS K G+LD A VF MP D SW ++ + + RF+ A+R FV+
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + +++ S L++C L DL+ G ++H+ + K+ V + ++L++MY+K G
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ FDG M R++V+WNS+I Y QN
Sbjct: 202 VACAQRAFDG-------------------------------MAVRNIVSWNSLITCYEQN 230
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII-RTEFDATGP 314
G +AL +F M+ D+ ++PD+ TLAS +SACA+ ++ G QIHA ++ R ++
Sbjct: 231 GPAGKALEVFV-MMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLV 289
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+GNAL+ YAK V A+ + ++ + NV++ T+++ GY + + AR +F ++ +
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDR--MPLRNVVSETSMVCGYARAASVKAARLMFSNMME 347
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
++VV+W A++ GY QNG N++AV LF + RE P +YT +L+ ++LA L G+Q
Sbjct: 348 KNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQA 407
Query: 435 HASALR------SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
H L+ SGE S + V N+LI MY K G + VF + R + VSW +MIV
Sbjct: 408 HTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVER-DVVSWNAMIVG 466
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQ+G G A+++F +ML G KPDH+T +GVL+AC+H GLVE+G+RY++ M+ + P
Sbjct: 467 YAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAP 526
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
HF MVDLLGRAG L EA + I+ MP++PD V WGSLL+AC+VH N++LGK AEKL
Sbjct: 527 MKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKL 586
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+ I+P NSG Y L N+Y+ G+W+D +RK M+ GV K G SW++IQ++VHVF V+
Sbjct: 587 MEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVK 646
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
D HP + I+ + + +++K G+VP+ A EE+ +++ H
Sbjct: 647 DKRHPLKKDIHLVLKFLTEQMKWAGYVPE-ADDDEICEEESDSELVLH 693
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 7/362 (1%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D A L +C + ++IHA II+T+F + + N L+ Y K G E A+K+
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++ + N ++ +L K G + A +F S+ + D +W AM+ G+ Q+ ++A
Sbjct: 78 DR--MPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEA 135
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ F M E N Y+ + LS + L L+ G QIHA +S + + +AL+ M
Sbjct: 136 LRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDM 195
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YSK G + A+R F+ + R VSW S+I Q+G +A+++F M++ G++PD IT
Sbjct: 196 YSKCGVVACAQRAFDGMAVRN-IVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEIT 254
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
V++AC + +G + + + K + ++VD+ + + EA + M
Sbjct: 255 LASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
PL +VV+ S++ ++ ++ ++ N +++AL Y+ G+ E+A
Sbjct: 315 PLR-NVVSETSMVCGYARAASVKAARLMFSNMM---EKNVVSWNALIAGYTQNGENEEAV 370
Query: 637 NI 638
+
Sbjct: 371 RL 372
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/706 (37%), Positives = 402/706 (56%), Gaps = 68/706 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+++ AY + GR+ A VF+ MP RD +W ++ R +A+ + MV + V
Sbjct: 106 GSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVA 165
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T++SVL C LGD + +H + VK GLSG + V N+L+++Y K+G A V
Sbjct: 166 GDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWV 225
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F GM L RD+VTWNS+I+ Q G A+
Sbjct: 226 FGGMAL-------------------------------RDLVTWNSIISANEQGGKVAAAV 254
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M+ +S + PD TL S SA A K +H Y+ R +D
Sbjct: 255 ELFHGMM-ESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD------------ 301
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
VG ++IA ++D Y K+ I A+++FD+L DRDVV+W
Sbjct: 302 ---VG-----------------DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNT 341
Query: 383 MLVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY QNGL +A+ ++ M EG KP T ++L S L L G ++HA ++++
Sbjct: 342 LITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKT 401
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + V+ LI +Y+K G + A +F + R+ T W ++I L HG G +A+ L
Sbjct: 402 GLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMP-RRSTGPWNAIIAGLGVHGHGAKALSL 460
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M + IKPDH+T+V +L AC+H GLV+QG+ ++++M+ V+ I P H+ MVD+LG
Sbjct: 461 FSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLG 520
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L EA+ FI++MP++PD WG+LL ACR+H N+++GK+A++ L ++P+N G Y
Sbjct: 521 RAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 580
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF--GVEDWLHPQRDAIY 679
+ N+Y+ GKW+ +R ++ ++KT G+S ++++ V VF G + HPQ + I
Sbjct: 581 MSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQ 640
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+ + ++K G+VPD + VL DVEED KEQ+L +HSE+LAIAFG+I+TP T L I
Sbjct: 641 RGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIY 700
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCHSA K+I K+ +REI+VRDA RFHHFK G CSC D+W
Sbjct: 701 KNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 206/502 (41%), Gaps = 130/502 (25%)
Query: 34 LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
++H +K GL +F+ N+L++ Y K ++ A VF M ++ L +WN+I+SA + G
Sbjct: 189 VMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGG 248
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
++ A E+F+ M++ V P T+ S+ +
Sbjct: 249 KVAAAVELFH-------------------------------GMMESGVCPDVLTLVSLAS 277
Query: 154 SCTALGDLSAGKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+ GD K VH +V + G G + N++++MYAK+ A+ VFD + ++V
Sbjct: 278 AVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVV 337
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SW N++I GY QNG EA+ ++ +M
Sbjct: 338 SW-------------------------------NTLITGYMQNGLANEAIRIYNDMHNHE 366
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
LKP + T S L A + L L+ G ++HA I+T +
Sbjct: 367 GLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLN---------------------- 404
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
L+V T L+D Y K G + A +F+ + R W A++ G +G
Sbjct: 405 -----------LDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGH 453
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
A+ LF M +E KP++ T ++L+ S +D G+ S +
Sbjct: 454 GAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGR---------------SFFDL 498
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
+ T+Y G + A+ +T M+ L + G +EA FE + + IKP
Sbjct: 499 MQTVY---GIVPIAKH-------------YTCMVDMLGRAGQLDEA---FEFIQSMPIKP 539
Query: 513 DHITYVGVLTACTHGGLVEQGQ 534
D + +L AC G VE G+
Sbjct: 540 DSAVWGALLGACRIHGNVEMGK 561
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 130/256 (50%), Gaps = 10/256 (3%)
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
G+ + NV A +L+ Y++ G + A R+FD + +RDV AW AML G +N DAV L
Sbjct: 96 GLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTL 155
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
MV EG + TLS++L + L +H A++ G + L V NALI +Y K
Sbjct: 156 LGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGK 215
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G + A VF + R + V+W S+I A Q G A++LF M+E G+ PD +T V
Sbjct: 216 LGMLTEAHWVFGGMALR-DLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVS 274
Query: 520 VLTACTHGGLVEQGQRYYNMMK----NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
+ +A G + + ++ +V I +MVD+ + + A +N
Sbjct: 275 LASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAG----NAMVDMYAKMSKIDAAQKVFDN 330
Query: 576 MPLEPDVVAWGSLLSA 591
+P + DVV+W +L++
Sbjct: 331 LP-DRDVVSWNTLITG 345
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 63/267 (23%)
Query: 33 KLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
K VH + + G + + N++++ YAK I A+KVFD +P + + SWNT+++ Y +
Sbjct: 289 KSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQ 348
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A ++N M N + + P Q T SV
Sbjct: 349 NGLANEAIRIYNDMHNHEGLK------------------------------PIQGTFVSV 378
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + + LG L G ++H+ +KTGL+ V VT L+++YAK G + A +F+ M ++
Sbjct: 379 LPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRST 438
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
WN + IAG +G+ +AL +F+ M +
Sbjct: 439 GPWNAI-------------------------------IAGLGVHGHGAKALSLFSQM-QQ 466
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGK 298
+KPD T S L+AC++ + G+
Sbjct: 467 EEIKPDHVTFVSLLAACSHAGLVDQGR 493
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 39/215 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA IK GL+L V++ L++ YAK + A +F+ MP ++ WN I++
Sbjct: 391 GMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGV 450
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A+ +F +M Q+++ P T S+
Sbjct: 451 H-------------------------------GHGAKALSLFSQMQQEEIKPDHVTFVSL 479
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVT---NSLLNMYAKVGDEMMAKAVFDGMRL 208
LA+C+ G + G+ F + + G V + +++M + G A M +
Sbjct: 480 LAACSHAGLVDQGRSF--FDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPI 537
Query: 209 KNVSS-WNVVV-SLHIHSGRLDLARAQFDQMIERD 241
K S+ W ++ + IH G +++ + + E D
Sbjct: 538 KPDSAVWGALLGACRIH-GNVEMGKVASQNLFELD 571
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/701 (37%), Positives = 396/701 (56%), Gaps = 65/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ YAK G + A ++F + RD V+W+ II + G + A+ +F EM ++ P
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ T+ S+L +C L L GK +H F VK + ++ +L++MYAK G
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG---------- 479
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
A F++M RD+VTWNS+I GY+Q G + A+ M
Sbjct: 480 ---------------------FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F L+ S++ PD T+ + ACA L L G IH I++ F++ V NALI YA
Sbjct: 519 FYK-LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYA 577
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G + A+ + N FT +D V W ++
Sbjct: 578 KCGSLPSAEFL--------FNKTDFT------------------------KDEVTWNVII 605
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y QNG K+A+ F M E PN+ T ++L ++ LA+ G HA ++ G
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S+ V N+LI MY+K G ++ + ++FN + ++TVSW +M+ A HG G+ AI LF
Sbjct: 666 SNTLVGNSLIDMYAKCGQLDYSEKLFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSL 724
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M E ++ D +++V VL+AC H GLVE+G++ ++ M + + IKP H+A MVDLLGRAG
Sbjct: 725 MQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 784
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L E FI+ MP+EPD WG+LL +CR+H N+ LG++A + L+ +EP N + L +
Sbjct: 785 LFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSS 844
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+ G+W DA R M +G+KKT G SWV+++NKVH F V D HPQ ++++
Sbjct: 845 IYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNT 904
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++++++G+VPD + VL +VEE+ KE L HSE+LAI F L++TP +T++I+KNLRV
Sbjct: 905 LLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRV 964
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ KFI K+ R I+VRDATRFHHF+ G+CSC DYW
Sbjct: 965 CADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 234/508 (46%), Gaps = 71/508 (13%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ Y+K G L A EVF+ MP RD V+W +I ++ A+ F M V P+
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
++ ++ L ++ + +H +V + S V +N L+++Y+K GD
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGD--------- 278
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+D+AR FDQM+++D V+W +M+AGY+ NG E L +
Sbjct: 279 ----------------------VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLEL 316
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M K +++ +K + S A A L+ GK+IH ++ D+
Sbjct: 317 FDKM-KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDS------------- 362
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+++ T L+ Y K G+ A+++F L+ RD+VAW+A++
Sbjct: 363 --------------------DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Q G ++A+ LF+ M + KPN TL ++L + L+ L GK IH +++
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD 462
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S LS AL++MY+K G AA FN + R + V+W S+I AQ G AI +F +
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-SMVDLLGRA 563
+ I PD T VGV+ AC ++QG + ++ V + H +++D+ +
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDCHVKNALIDMYAKC 579
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G L A D V W +++A
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 34/250 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H I+K G +KN+L++ YAK S+ A+ +F++
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDF--------------- 594
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+D V+W II Y + G K AI F +M + P T SV
Sbjct: 595 ---------------TKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSV 639
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + L G H+ +++ G V NSL++MYAK G ++ +F+ M K+
Sbjct: 640 LPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDT 699
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
SWN ++S + G D A A F M ++ D V++ S+++ G E +F +
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHS 759
Query: 268 MLKDSSLKPD 277
M +KPD
Sbjct: 760 MSDKYHIKPD 769
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN + +S L A+L G HA II+ G + + NSL++ YAK
Sbjct: 631 PNSVTFVSVLPAAAYLAAFR-------EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQ 683
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ Y++K+F+EM K SWN +LS YA G D A +F+LM DSVS+ +++
Sbjct: 684 LDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSA 743
Query: 120 YNEIGRFKNAIRMFVEM 136
G + ++F M
Sbjct: 744 CRHAGLVEEGRKIFHSM 760
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/736 (36%), Positives = 426/736 (57%), Gaps = 52/736 (7%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N+ + A+ +I A+ F+ MP++T S+N +L+ Y + D A +F MP+RD
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
S+ +I + ++ Q LP + AL + V SF
Sbjct: 81 SYNALISGLS---------------LRRQTLPD---------AAAALASIPFPPSVVSF- 115
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
SLL Y + G A +F M +N S+ V++ + +GR++ AR
Sbjct: 116 ------------TSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEAR 163
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M +RDVV W +M++GY Q G EA +F M K + + + + +S A
Sbjct: 164 RLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV-----SWTAMISGYAQN 218
Query: 292 EKLKLGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ L +++ + R E T A++ Y + G VE A ++ + + V A
Sbjct: 219 GEVNLARKLFEVMPERNEVSWT-----AMLVGYIQAGHVEDAAELF--NAMPEHPVAACN 271
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
++ G+ + G + A+ +F+ + +RD W+AM+ YEQN +A+ FR M+ G +P
Sbjct: 272 AMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRP 331
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
N ++ ++L+V ++LA LD+G+++HA+ LR + +ALITMY K GN++ A+RVF
Sbjct: 332 NYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ ++ V W SMI AQHGLGE+A+ +F M G+ PD ITY+G LTAC++ G V
Sbjct: 392 HTFE-PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKV 450
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
++G+ +N M I+P H++ MVDLLGR+GL++EA++ I+NMP+EPD V WG+L+
Sbjct: 451 KEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMG 510
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
ACR+H+N ++ + AA+KLL +EP N+G Y L ++Y+S G+WEDA+ +RK + + K+
Sbjct: 511 ACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKS 570
Query: 651 QGFSWVQIQNKVHVFGVEDWL-HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G SW++ +VH+F D L HP+ AI + K+ + E G+ D + VLHD++E+
Sbjct: 571 PGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQ 630
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
K LR+HSE+ A+A+GL+ PE +R+MKNLRVC DCHSAIK I K+ REI++RDA
Sbjct: 631 KSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDAN 690
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHFK G CSCRDYW
Sbjct: 691 RFHHFKDGFCSCRDYW 706
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 221/478 (46%), Gaps = 76/478 (15%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV SL+ Y + ++ A ++F +MP + S+ +L GR++ A +F+ MP
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP 170
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+RD V+WT ++ Y + GR A +F EM + V+ + T++++ G+++ +K
Sbjct: 171 DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV----SWTAMISGYAQNGEVNLARK 226
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+ + + V+ T L+ Y + G A +F+ M V++ N ++ G
Sbjct: 227 LFEVMPERNE---VSWTAMLVG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+D A+ F++M ERD TW++MI Y QN + EAL F ML ++P+ ++ S L+
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLW-RGVRPNYPSVISILT 341
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
CA L L G+++HA ++R FD +ALI+ Y
Sbjct: 342 VCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY----------------------- 378
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
IK G++ A+R+F + +D+V W +M+ GY Q+GL + A+ +F M
Sbjct: 379 ----------IKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLA 428
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G P+ T L+ S + G++I +S++V++++
Sbjct: 429 GMSPDGITYIGALTACSYTGKVKEGREIF---------NSMTVNSSI------------- 466
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
R ++ M+ L + GL EEA L + M ++PD + + ++ AC
Sbjct: 467 ---------RPGAEHYSCMVDLLGRSGLVEEAFDLIKNM---PVEPDAVIWGALMGAC 512
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN PS+IS L A L + G+ VHA +++C + VF ++L+ Y K +
Sbjct: 331 PNYPSVISILTVCAALAVLDY-------GREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTIIVT 119
+ AK+VF K + WN++++ YA+ G + A +F+ M + D +++ +
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443
Query: 120 YNEIGRFKNAIRMFVEM-VQDQVLP 143
+ G+ K +F M V + P
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRP 468
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/772 (36%), Positives = 429/772 (55%), Gaps = 103/772 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT++ YAK G LD + +F + R+ VSW + Y + A+ +F EMV+ ++
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +F+++ +L +C L + G+K+H ++K GL N+L++MY+K
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSK---------- 230
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+G ++ A A F + DVV+WN++IAG + + AL
Sbjct: 231 ---------------------AGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLAL 269
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-----FDATGPVG- 316
M + +K S +P+ FTL+S L ACA + +LG+Q+H+ +I+ + F A G V
Sbjct: 270 -MLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDM 328
Query: 317 -------------------------NALISCYAKVG------------------------ 327
NALIS Y++ G
Sbjct: 329 YSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTL 388
Query: 328 -----------GVEIAQKIVE---QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+++ ++I +SGI Y + +LLD Y K I A +IF+
Sbjct: 389 STVLKSVASLQAIKVCKQIHTISIKSGI-YSDFYVINSLLDTYGKCNHIDEASKIFEERT 447
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D+VA+T+M+ Y Q G ++A++L+ M KP+ + S++L+ ++L++ + GKQ
Sbjct: 448 WEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQ 507
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H A++ G + SN+L+ MY+K G+I A R F+ I R VSW++MI AQHG
Sbjct: 508 LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRG-IVSWSAMIGGYAQHG 566
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G+EA++LF +ML G+ P+HIT V VL AC H GLV +G++Y+ M+ + IKPT H+
Sbjct: 567 HGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHY 626
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
A M+DLLGR+G L EA + ++P E D WG+LL A R+HKN++LG+ AA+ L +EP
Sbjct: 627 ACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEP 686
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
+ SG + L N+Y+S G WE+ A +RK MK VKK G SW++I++KV+ F V D H
Sbjct: 687 EKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHS 746
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ D IY K+ ++ D + + G+ +H+V++ KE++L HHSEKLA+AFGLI+TP
Sbjct: 747 RSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPG 806
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLR+C DCH+ KF+CK+V REI+VRD RFHHFK G CSC DYW
Sbjct: 807 GPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 251/563 (44%), Gaps = 111/563 (19%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA +IK G L+N L+ Y+K YA+K+ DE
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESS------------------- 43
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
D VSW++++ Y + G + A+ +F EM V +FT SVL +
Sbjct: 44 ------------ELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKA 91
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C+ DL+ G+KVH V TG V N+L+ MYAK G
Sbjct: 92 CSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCG-------------------- 131
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
LD +R F ++ER+VV+WN++ + Y Q+ EA+G+F M++ S +
Sbjct: 132 -----------LLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVR-SGI 179
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
P++F+++ L+ACA L++ LG++IH +++ D NAL+ Y+K G +E
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIE---- 235
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
A +F + DVV+W A++ G + N
Sbjct: 236 -----------------------------GAVAVFQDIAHPDVVSWNAIIAGCVLHDCND 266
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
A+ L M G +PN +TLS+ L +++ + G+Q+H+S ++ S L + L+
Sbjct: 267 LALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MYSK ++ ARR ++ + +++ ++W ++I +Q G +A+ LF +M I +
Sbjct: 327 DMYSKCEMMDDARRAYDSMP-KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQ 385
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA------SMVDLLGRAGLLQE 568
T VL + + + K +H I ++ S++D G+ + E
Sbjct: 386 TTLSTVLKSVA-------SLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDE 438
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A E E D+VA+ S+++A
Sbjct: 439 ASKIFEERTWE-DLVAYTSMITA 460
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 16/277 (5%)
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y K G AR++ D + DVV+W+++L GY QNG ++A+ +F M G K N +T
Sbjct: 26 YSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTF 85
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
++L S L+ G+++H A+ +G S V+N L+ MY+K G ++ +RR+F I
Sbjct: 86 PSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVE 145
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ--G 533
R VSW ++ Q L EA+ LF+ M+ GI P+ + +L AC GL E G
Sbjct: 146 RN-VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA--GLQEGDLG 202
Query: 534 QRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++ + +M K+ F+ ++VD+ +AG ++ A +++ PDVV+W ++++
Sbjct: 203 RKIHGLML---KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIAG 258
Query: 592 CRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
C +H DL +LL E SG + L S+
Sbjct: 259 CVLHDCNDLA-----LMLLDEMKGSGTRPNMFTLSSA 290
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 31/135 (22%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H IK G +F NSL+N YAK SI A + F E+P + + SW+ ++ YA+
Sbjct: 505 GKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQ 564
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G K A+R+F +M++D V P T+ SV
Sbjct: 565 H-------------------------------GHGKEALRLFNQMLRDGVPPNHITLVSV 593
Query: 152 LASCTALGDLSAGKK 166
L +C G ++ GK+
Sbjct: 594 LCACNHAGLVNEGKQ 608
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++HA ++ G + S+ N L+T+YSK AR++ + + VSW+S++ Q+
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESS-ELDVVSWSSLLSGYVQN 60
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G EEA+ +F M LG+K + T+ VL AC+ +R NM + VH +
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSM-------KRDLNMGRKVHGMAVVTGF 113
Query: 553 FA------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
+ ++V + + GLL ++ + +E +VV+W +L S C V L
Sbjct: 114 ESDGFVANTLVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALFS-CYVQSEL 163
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/748 (36%), Positives = 414/748 (55%), Gaps = 88/748 (11%)
Query: 60 KTESISYAKKVFDEMPVKTLC-----------SWNTILSAYAKQGRLD---LACEVFNLM 105
K E SY E P +C ++N+IL GR D LA + +
Sbjct: 1917 KDEKGSYPYACLSESPSIYVCVVNFYECFDGITYNSILFG-VPSGREDHSNLATWFYKYV 1975
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
+ SW ++I G A+R F + + ++PT+ + + SC+AL DL +G+
Sbjct: 1976 DKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGR 2035
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
H G + V+++L++MY+K G
Sbjct: 2036 MSHQQAFVFGFETDLFVSSALIDMYSKCG------------------------------- 2064
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS-------LKPDK 278
+L ARA FD++ R+VV+W SMI GY QN AL +F + L++ + + D
Sbjct: 2065 QLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDS 2124
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+ S LSAC+ + + + +H ++++ FD + VGN
Sbjct: 2125 VVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGN--------------------- 2163
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
TL+D Y K G ++++FD + ++D ++W +M+ Y Q+GL+ +A+E
Sbjct: 2164 ------------TLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 2211
Query: 399 LFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
+F MVR G + N TLSA+L + +L GK IH ++ ++ V ++I MY
Sbjct: 2212 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMY 2271
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
K G + A++ F+ + + SWT+M+ HG +EA+ +F +M+ G+KP++IT+
Sbjct: 2272 CKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
V VL AC+H GLVE+G ++N MK+ + I+P H+ MVDL GRAG L EAYN I+ M
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 2390
Query: 578 LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
++PD V WGSLL ACR+HKN+DLG+IAA+KL ++PDN G Y L NLY+ G+W D
Sbjct: 2391 MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVER 2450
Query: 638 IRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPD 697
+R MK + K GFS V+++ +VHVF V D HP + IY + K+ E++++G+VP+
Sbjct: 2451 MRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPN 2510
Query: 698 TASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICK 757
SVLHDV+E+ KE +LR HSEKLA+AFG++++ TT+ I+KNLRVC DCH+ IK I K
Sbjct: 2511 MTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISK 2570
Query: 758 LVDREIVVRDATRFHHFKKGLCSCRDYW 785
LV R+ VVRD+ RFHHFK G+CSC DYW
Sbjct: 2571 LVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 218/420 (51%), Gaps = 38/420 (9%)
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C L +++H+ ++++GLS +T L+++Y
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLY-------------------- 69
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
S H GR+ A F Q+ TWN +I + NG +AL ++ NM+
Sbjct: 70 --------STH---GRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVC 118
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ DKFT + AC N + LGK +H +I+ F V N LI Y K G
Sbjct: 119 -QGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTR 177
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A K+ E+ + NV+++TT++ G I GD+ ARRIFD + ++VV+WTAM+ GY +N
Sbjct: 178 FALKVFEKMRVR--NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN 235
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
++A+ELF+ M E PN YT+ +++ + + L G+ IH A+++ + +
Sbjct: 236 QQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG 295
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
ALI MYSK G+I A VF + R+ +W SMI +L HGLG+EA+ LF M + +
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNV 354
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KPD IT++GVL AC H V++G Y+ M + I P P H+ M +L R+ L EA+
Sbjct: 355 KPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/571 (25%), Positives = 256/571 (44%), Gaps = 114/571 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G++ H + G +F+ ++L++ Y+K + A+ +FDE+P++ + SW ++++ Y +
Sbjct: 2034 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 2093
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV-TS 150
+ D N + FK+ + E+ +P V S
Sbjct: 2094 NEQAD------------------------NALLLFKDFLEEETEVEDGNNVPLDSVVMVS 2129
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C+ + + VH FVVK G G + V N+L++ YAK G +++K VFD M K+
Sbjct: 2130 VLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKD 2189
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
SW NSMIA Y+Q+G EAL +F M++
Sbjct: 2190 DISW-------------------------------NSMIAVYAQSGLSGEALEVFHGMVR 2218
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
++ + TL++ L ACA+ L+ GK IH +I+ + + VG ++I Y K G VE
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 2278
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+A+K FD +++++V +WTAM+ GY +
Sbjct: 2279 MAKK---------------------------------TFDRMKEKNVKSWTAMVAGYGMH 2305
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G K+A+++F MVR G KPN T ++L+ S ++ G +A + +
Sbjct: 2306 GRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH 2365
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQ-LFERM 505
++ ++ +AG +N A + + + + V W S++ A H LGE A Q LFE
Sbjct: 2366 YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE-- 2423
Query: 506 LELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
+ PD+ Y +L+ G +R +MKN +KP P S+V+L GR
Sbjct: 2424 ----LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKP-PGF--SLVELKGRVH 2476
Query: 565 LL----------QEAYNFIENMPLEPDVVAW 585
+ + Y ++E + LE + +
Sbjct: 2477 VFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 2507
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 191/414 (46%), Gaps = 46/414 (11%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ Y+ GR+ A +F + N + +W II G + A+ ++ MV +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+FT V+ +CT + GK VH ++K G SG V V N+L++ Y K G A VF+
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
MR++NV SW V+S I G L AR FD++ ++VV+W +MI GY +N EAL +
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + ++ P+++T+ S + AC + L LG+ IH Y I+ + +G ALI Y+
Sbjct: 245 FKRM-QAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G ++ A +F+++ + + W +M+
Sbjct: 304 KCGSIK---------------------------------DAIEVFETMPRKSLPTWNSMI 330
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GE 443
+GL ++A+ LF M R KP+ T +L + ++ G + G
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390
Query: 444 ASSLSVSNALITMYSKAGNINAA----RRVFNL-------IHWRQETVSWTSMI 486
A + +Y+++ N++ A + V +L R + V+WT ++
Sbjct: 391 APIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQVAWTQLL 444
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 39/314 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK+VH +IK G VF++N+L++FY K +A KVF++M V+ + SW T++S
Sbjct: 143 LGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLI 202
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G L A +F+ +P+++ VSWT +I Y + + A+ +F M + + P ++T+ S
Sbjct: 203 SCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVS 262
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +CT +G L+ G+ +H + +K + V + +L++MY+K G A VF+ M K+
Sbjct: 263 LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS 322
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ +W NSMI +G EAL +F+ M +
Sbjct: 323 LPTW-------------------------------NSMITSLGVHGLGQEALNLFSEMER 351
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-TEFDATGPVG---NALISCYAKV 326
++KPD T L AC +++ +K G AY R T+ P+ + YA+
Sbjct: 352 -VNVKPDAITFIGVLCACVHIKNVKEG---CAYFTRMTQHYGIAPIPEHYECMTELYARS 407
Query: 327 GGVEIAQKIVEQSG 340
++ A K ++ G
Sbjct: 408 NNLDEAFKSTKEVG 421
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 70/342 (20%)
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C N + L+ QIHA IIR+ + LI Y+ G
Sbjct: 34 LQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGR---------------- 74
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
IA+ LL F +++ W ++ NGL++ A+ L+++MV
Sbjct: 75 --IAYAILL---------------FYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMV 117
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+G + +T ++ ++ S+D GK +H S ++ G + + V N LI Y K G+
Sbjct: 118 CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTR 177
Query: 465 AARRVF------NLIHW------------------------RQETVSWTSMIVALAQHGL 494
A +VF N++ W + VSWT+MI ++
Sbjct: 178 FALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQ 237
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHF 553
EEA++LF+RM I P+ T V ++ ACT G++ G+ ++ +KN +I
Sbjct: 238 PEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG-- 295
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+++D+ + G +++A E MP + W S++++ VH
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH 336
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ H +QIHA +RSG ++ ++ LI +YS G I A +F I T +W +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ-NPCTFTWNLII 97
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVEQGQR 535
A +GL E+A+ L++ M+ GI D T+ V+ ACT HG L++ G
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++N +++D + G + A E M + +VV+W +++S
Sbjct: 158 GDVFVQN------------NLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGL--- 201
Query: 596 KNLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
+ G + + + I N +++A+ N Y + E+A + K M+
Sbjct: 202 --ISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/694 (38%), Positives = 407/694 (58%), Gaps = 59/694 (8%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+FN + +++W ++I Y G ++ F+ M+ + P SVL SC L D
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG-------DEMMAKAVFDGM--RLKNV 211
L+ G+ +H ++++ GL + N+L+NMY+K+ + A VFD M R ++V
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+ +V+ D R F+ M E+D+V+WN++IAG ++NG E L M M
Sbjct: 182 RTVSVLSE--------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREM-GG 232
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++LKPD FTL+S L A + GK+IH IR DA
Sbjct: 233 ANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDA-------------------- 272
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
++ ++L+D Y K + + R+F L +RD ++W +++ G QNG
Sbjct: 273 -------------DIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNG 319
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L + + FR M+ KP +Y+ S+++ + L +L GKQ+H R+G ++ +++
Sbjct: 320 LFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIAS 379
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+L+ MY+K GNI A+++F+ + R + VSWT+MI+ A HG +AI+LFE+M GIK
Sbjct: 380 SLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
VLTAC+HGGLV++ +Y+N M I P H+A++ DLLGRAG L+EAY+
Sbjct: 439 -------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYD 491
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI M + P W +LLSACRVHKN+D+ + A ++L ++P+N+GAY L N+YS+ +
Sbjct: 492 FICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARR 551
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W++AA R SM+ +G++KT SW++++NKV+ F D HP + I M + + +++
Sbjct: 552 WKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEK 611
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+VPDT+ V HDVEE+ K+ ++ HSE+LAI FG+I+TP T+R+ KNLRVC DCH+A
Sbjct: 612 EGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTA 671
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KFI K+V REIVVRD +RFHHFK G CSC DYW
Sbjct: 672 TKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 218/487 (44%), Gaps = 88/487 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY-------AKKVFDEMPVKTLCSWN 83
+G+ +H II+ GL ++ N+LMN Y+K + A +VFDEM +T
Sbjct: 124 LGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRT 183
Query: 84 -TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++LS D ++F +MP +D VSW TII G ++ +RM EM +
Sbjct: 184 VSVLSE-------DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLK 236
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT++SVL D+S GK++H ++ GL + V +SL++MYAK + V
Sbjct: 237 PDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV 296
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F + ++ SWN S+IAG QNG E L
Sbjct: 297 FTLLTERDGISWN-------------------------------SIIAGCVQNGLFDEGL 325
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F ML + +KP ++ +S + ACA+L L LGKQ+H YI R FD + ++L+
Sbjct: 326 RFFRQMLM-AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 384
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +I A++IFD +R RD+V+WTA
Sbjct: 385 YAKCG---------------------------------NIRTAKQIFDRMRLRDMVSWTA 411
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS- 441
M++G +G DA+ELF M EG K A+L+ S +D + S R
Sbjct: 412 MIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDF 464
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G A + A+ + +AG + A +H W +++ A H + A ++
Sbjct: 465 GIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKV 524
Query: 502 FERMLEL 508
R+LE+
Sbjct: 525 ANRILEV 531
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 291/792 (36%), Positives = 438/792 (55%), Gaps = 76/792 (9%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+ +PP I Y +LL+ K +N K +H+ IIK GL+ +VF+++ L++F A
Sbjct: 16 LPASDPPYKILEQHPYLNLLE---KCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAV 72
Query: 61 TES--ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS-WTTII 117
+ S +SYA +F+E N ++ +V W ++I
Sbjct: 73 SPSGDLSYALSLFEE-----------------------------NQQHHKHNVFIWNSLI 103
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
Y+ +++ +F M+ V P T + SCT GK++H+ +K L
Sbjct: 104 RGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALH 163
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+V S+++MYA VG+ A+ VFD L++ S+ +++ ++ G LD AR FD++
Sbjct: 164 FNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEI 223
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
+DVV+WN+MI+GY Q+G EA+ F M +++++ P+K T+ LSAC + +LG
Sbjct: 224 PVKDVVSWNAMISGYVQSGRFEEAIVCFYEM-QEANVLPNKSTMVVVLSACGHTRSGELG 282
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
K I +++ F + + NALI D Y
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALI---------------------------------DMYC 309
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
K G+ AR +FD + ++DV++W M+ GY L ++A+ LF M+R KPN+ T
Sbjct: 310 KCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLG 369
Query: 418 MLSVSSSLASLDHGKQIHA---SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+L + L +LD GK +HA LR+ +SL S LI MY+K G I AA RVF +H
Sbjct: 370 ILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTS--LIDMYAKCGCIEAAERVFRSMH 427
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI-KPDHITYVGVLTACTHGGLVEQG 533
R SW +M+ A HG E A+ LF M+ G+ +PD IT+VGVL+ACT GLV+ G
Sbjct: 428 SRN-LASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLG 486
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+Y+ M + I P H+ M+DLL RA +EA ++NM +EPD WGSLLSAC+
Sbjct: 487 HQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACK 546
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
H ++ G+ AE+L +EP+N+GA+ L N+Y+ G+W+D A IR + G+KK G
Sbjct: 547 AHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGC 606
Query: 654 SWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM 713
+ ++I VH F V D HP+ + IY + ++ ++E GFVP+T+ VL+D++E+ KE
Sbjct: 607 TSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGA 666
Query: 714 LRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHH 773
L HSEKLAI+FGLI T TT+RI+KNLRVC +CHSA K I K+ +REI+ RD RFHH
Sbjct: 667 LSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHH 726
Query: 774 FKKGLCSCRDYW 785
FK G CSC D W
Sbjct: 727 FKDGFCSCNDCW 738
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/754 (35%), Positives = 410/754 (54%), Gaps = 95/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH +K GL+ + + NSL++ Y+K +S A+ +FD+ K + SWN+++ YA+
Sbjct: 223 GMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR 282
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ + C F L+ + E + K +FT+ +V
Sbjct: 283 E---EDVCRTFYLLQKMQT-----------EDAKMK---------------ADEFTILNV 313
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C +L + K++H + + GL V N+ + Y + G ++ VFD M K V
Sbjct: 314 LPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTV 373
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S +WN+++ GY+QN +AL ++ M D
Sbjct: 374 S-------------------------------SWNALLCGYAQNSDPRKALDLYLQM-TD 401
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S L PD FT+ S L AC+ ++ L G++IH + +R +G +L+S Y
Sbjct: 402 SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLY-------- 453
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
I G A+ +FD + R +V+W M+ GY QNG
Sbjct: 454 -------------------------ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNG 488
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L +A+ LFR M+ +G +P + + S L++L GK++H AL++ + VS+
Sbjct: 489 LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSS 548
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
++I MY+K G I ++R+F+ + ++ SW +I HG G+EA++LFE+ML LG+K
Sbjct: 549 SIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD T+ G+L AC+H GLVE G Y+N M N+H I+P H+ +VD+LGRAG + +A
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 667
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
IE MP +PD W SLLS+CR+H NL LG+ A KLL +EP+ Y + NL++ GK
Sbjct: 668 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGK 727
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+D +R MK +G++K G SW+++ KVH F + D + P+ + + ++ +I
Sbjct: 728 WDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISS 787
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+ PDT SVLHD+EE+ K +LR HSEKLAI+FGL++T + +R+ KNLR+C DCH+A
Sbjct: 788 IGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNA 847
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KFI K+V+R+IVVRD RFHHF+ G+CSC DYW
Sbjct: 848 AKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 236/536 (44%), Gaps = 102/536 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNS-LMNFYAKTESISYAKKVFDEMPVK 77
LLQ+ + ++ VG+ +H + + F+ N+ ++ Y+ S S ++ VFD++ K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
L WN I+SAY T NE+ F++A+ +F E++
Sbjct: 64 NLFQWNAIVSAY-----------------------------TRNEL--FEDAMSIFSELI 92
Query: 138 Q-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ P FT+ V+ +C L DL G+ +H K L V V N+L+ MY K G
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCG-- 150
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
++ +AV F+ M ER++V+WNS+I G+S+NG
Sbjct: 151 LVEEAV-----------------------------KVFEHMPERNLVSWNSIICGFSENG 181
Query: 257 YDFEALGMFANML-KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+ E+ F ML + S PD TL + L CA E ++ G +H ++ + V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI Y+K + AQ + FD +
Sbjct: 242 NNSLIDMYSKCRFLSEAQLL---------------------------------FDKNDKK 268
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLASLDHGKQ 433
++V+W +M+ GY + L + M E K + +T+ +L V + L K+
Sbjct: 269 NIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKE 328
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H + R G S+ V+NA I Y++ G + ++ RVF+L+ + + SW +++ AQ+
Sbjct: 329 LHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVS-SWNALLCGYAQNS 387
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKP 548
+A+ L+ +M + G+ PD T +L AC+ + G+ + ++N + P
Sbjct: 388 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDP 443
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 202/460 (43%), Gaps = 86/460 (18%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+++++ G +R FD++ +++ WN++++ Y++N +A+ +F+ ++ + KP
Sbjct: 40 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 99
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D FTL + ACA L L LG+ IH + + + VGNALI+ Y K G VE A K
Sbjct: 100 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK-- 157
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+F+ + +R++V+W +++ G+ +NG +++
Sbjct: 158 -------------------------------VFEHMPERNLVSWNSIICGFSENGFLQES 186
Query: 397 VELFRSMV--REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
FR M+ E P+ TL +L V + ++ G +H A++ G L V+N+LI
Sbjct: 187 FNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLI 246
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML--ELGIKP 512
MYSK ++ A+ +F+ + ++ VSW SMI A+ L ++M + +K
Sbjct: 247 DMYSKCRFLSEAQLLFDK-NDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKA 305
Query: 513 DHITYVGVLTAC-----------------------------------THGGLVEQGQRYY 537
D T + VL C T G + +R +
Sbjct: 306 DEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVF 365
Query: 538 NMM--KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++M K V +A D R L + Y + + L+PD GSLL AC
Sbjct: 366 DLMDTKTVSSWNALLCGYAQNSD--PRKAL--DLYLQMTDSGLDPDWFTIGSLLLACSRM 421
Query: 596 KNLDLGK----IAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
K+L G+ A L ++P +L +LY CGK
Sbjct: 422 KSLHYGEEIHGFALRNGLAVDPFIG---ISLLSLYICCGK 458
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP- 408
T ++ Y G +R +FD LR +++ W A++ Y +N L +DA+ +F ++
Sbjct: 38 TRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEH 97
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
KP+N+TL ++ + L L G+ IH A + S + V NALI MY K G + A +
Sbjct: 98 KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK 157
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML--ELGIKPDHITYVGVLTACTH 526
VF + R VSW S+I +++G +E+ F ML E PD T V VL C
Sbjct: 158 VFEHMPERN-LVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAG 216
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+E+G + + + + S++D+ + L EA + + ++V+W
Sbjct: 217 EEDIEKGMAVHGLAVKL-GLNEELMVNNSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWN 274
Query: 587 SLLSA 591
S++
Sbjct: 275 SMIGG 279
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 43/177 (24%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H +K L +F+ +S+++ YAK I ++++FD + K + SWN I++ Y
Sbjct: 527 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG 586
Query: 91 KQGR-------------------------LDLAC----------EVFNLMPNRDSVS--- 112
GR + +AC E FN M N ++
Sbjct: 587 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 646
Query: 113 --WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+T ++ GR +A+R+ EM D P +S+L+SC G+L G+KV
Sbjct: 647 EHYTCVVDMLGRAGRIDDALRLIEEMPGD---PDSRIWSSLLSSCRIHGNLGLGEKV 700
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 12/244 (4%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLI 473
+ +L ++ G+++H S + + ++ +ITMYS G+ + +R VF+ +
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI-KPDHITYVGVLTACTHGGLVE- 531
R+ W +++ A ++ L E+A+ +F ++ + KPD+ T V+ AC GL++
Sbjct: 61 R-RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDL 117
Query: 532 -QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
GQ + M + + A ++ + G+ GL++EA E+MP E ++V+W S++
Sbjct: 118 GLGQIIHGMATKMDLVSDVFVGNA-LIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIIC 175
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
+ L A ++L+ E + L + C ED I K M G+
Sbjct: 176 GFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEED---IEKGMAVHGLAVK 232
Query: 651 QGFS 654
G +
Sbjct: 233 LGLN 236
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/690 (38%), Positives = 404/690 (58%), Gaps = 45/690 (6%)
Query: 102 FNLMPNRDSVS-------WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
NL P ++S + II + + R K A+ + Q P+ ++++A+
Sbjct: 17 LNLNPKDTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQ----PSPRLYSTLIAA 72
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C L GK+VH+ + + ++N L++MYAK G + A+ +FD + K++ SW
Sbjct: 73 CLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSW 132
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N ++S + + GR++ AR FD+M RD +WN++I+GY G+ EAL +F M ++ S
Sbjct: 133 NTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESS 192
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+ FTL+S L+A A + L+ GK+IH Y+IR+ + V AL+ Y K G
Sbjct: 193 NCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCG------- 245
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ AR IFD + D+D+V+WT M+ ++G K
Sbjct: 246 --------------------------SLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKK 279
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+ LFR ++ G +PN YT + +L+ + LA+ GK++H R G ++AL+
Sbjct: 280 EGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALV 339
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
+YSK GN ARRVFN + R + VSWTS+IV AQ+G + A+Q FE +L G KPD
Sbjct: 340 HVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDE 398
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
IT+VGVL+ACTH GLV+ G Y++ +K H + T H+A ++DLL R+G +EA N I+
Sbjct: 399 ITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIID 458
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
NMP++PD W SLL CR+H N++L + AA+ L +EP+N Y L N+Y++ G W +
Sbjct: 459 NMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTE 518
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
+R M G+ K G SW++I+ +VHVF V D HP+ I+ + ++ ++KE G+
Sbjct: 519 ETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGY 578
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
V DT VLHDVEE+ KEQ + +HSEKLA+AFG+IST T +++ KNLR C DCH+A+K+
Sbjct: 579 VADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKY 638
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
I K+V R+I+VRD+ RFH F G CSC+DY
Sbjct: 639 ISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 260/542 (47%), Gaps = 75/542 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P P SP Y+ L+ + L+ R +GK VHA + + N L++ YAK S
Sbjct: 59 PQP----SP-RLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGS 113
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ +FDE+P K LCSWNT++S YA GR++ A ++F+ MP+RD+ SW +I Y
Sbjct: 114 LVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQ 173
Query: 124 GRFKNAIRMFVEMVQDQVLPTQ-FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G + A+ +F M +++ FT++S LA+ A+ L GK++H +++++GL V
Sbjct: 174 GWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVV 233
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+LL++Y K G A+ +FD M K++
Sbjct: 234 WTALLDLYGKCGSLNEARGIFDQMADKDI------------------------------- 262
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V+W +MI ++G E +F +++ S ++P+++T A L+ACA+L ++GK++H
Sbjct: 263 VSWTTMIHRCFEDGRKKEGFSLFRDLM-GSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
Y+ R +D +AL+ Y+K G E A+++ Q + +++++T+L+ G
Sbjct: 322 YMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQ--MPRPDLVSWTSLIVG------- 372
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
Y QNG A++ F S++R G KP+ T +LS
Sbjct: 373 ------------------------YAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSAC 408
Query: 423 SSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ +D G + H+ + G + +I + +++G A + + + + +
Sbjct: 409 THAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFL 468
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDH-ITYVGVLTACTHGGLVEQGQRYYNMM 540
W S++ HG E A + + + EL +P++ TY+ + + GL + + N M
Sbjct: 469 WASLLGGCRIHGNIELAERAAKALFEL--EPENPATYITLSNIYANAGLWTEETKVRNDM 526
Query: 541 KN 542
N
Sbjct: 527 DN 528
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/779 (35%), Positives = 413/779 (53%), Gaps = 98/779 (12%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P EF ++ ++ + SRN G+ VHA +++ G VF N+L++ Y K
Sbjct: 103 SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK------ 156
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
GR+D+A +F MP+ D VSW +I G
Sbjct: 157 -------------------------MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 191
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
AI + ++M ++P F ++S+L +C G G+++H F++K + L
Sbjct: 192 HRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGL 251
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK + LD A FD M RD++ WN
Sbjct: 252 VDMYAK-------------------------------NHFLDDAMKVFDWMSHRDLILWN 280
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
++I+G S G EA +F + K+ L ++ TLA+ L + A+LE +Q+HA +
Sbjct: 281 ALISGCSHGGRHDEAFSIFYGLRKEG-LGVNRTTLAAVLKSTASLEAASATRQVHALAEK 339
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F V N LI D Y K + A
Sbjct: 340 IGFIFDAHVVNGLI---------------------------------DSYWKCSCLSDAI 366
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+F+ D++A T+M+ Q + A++LF M+R+G +P+ + LS++L+ +SL+
Sbjct: 367 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 426
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ + GKQ+HA ++ S NAL+ Y+K G+I A F+ + R VSW++MI
Sbjct: 427 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 485
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
LAQHG G+ A++LF RM++ GI P+HIT VL AC H GLV++ +RY+N MK + I
Sbjct: 486 GGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGI 545
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
T H++ M+DLLGRAG L +A + +MP + + WG+LL A RVHK+ +LGK+AAE
Sbjct: 546 DRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAE 605
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL ++EP+ SG + L N Y+S G W + A +RK MK +KK SWV++++KVH F
Sbjct: 606 KLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFI 665
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D HP IY+K+ ++ D + + G++P+ LHD++ KE +L HHSE+LA+AF
Sbjct: 666 VGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFA 725
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+STP +R+ KNLR+C DCH A KFI +V REI++RD RFHHF+ G CSC DYW
Sbjct: 726 LLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 177/631 (28%), Positives = 288/631 (45%), Gaps = 116/631 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G VHA + G VF+ N+L+ Y + A++VFDE
Sbjct: 25 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAG--------------- 69
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
R++VSW ++ Y + + +AI++F EMV + PT+F +
Sbjct: 70 ---------------SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSC 114
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ +CT ++ AG++VH+ VV+ G V N+L++MY K+
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKM----------------- 157
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
GR+D+A F++M + DVV+WN++I+G NG+D A+ + M K
Sbjct: 158 --------------GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM-K 202
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S L P+ F L+S L ACA LG+QIH ++I+ D+ +G L+ YAK
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK----- 257
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
LD A ++FD + RD++ W A++ G
Sbjct: 258 -------------------NHFLD---------DAMKVFDWMSHRDLILWNALISGCSHG 289
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G + +A +F + +EG N TL+A+L ++SL + +Q+HA A + G V
Sbjct: 290 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 349
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
N LI Y K ++ A RVF + ++ TSMI AL+Q GE AI+LF ML G+
Sbjct: 350 NGLIDSYWKCSCLSDAIRVFEECS-SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 408
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT--PSHFA--SMVDLLGRAGLL 566
+PD +L AC EQG++ + H IK FA ++V + G +
Sbjct: 409 EPDPFVLSSLLNACASLSAYEQGKQVH-----AHLIKRQFMSDAFAGNALVYTYAKCGSI 463
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDL-GKIAAEKLLLIEPDNSGAYSA 621
++A ++P E VV+W +++ H + L+L G++ E I P++ S
Sbjct: 464 EDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG---INPNHITMTSV 519
Query: 622 LCNLYSSCGKWEDAANIRKSMKYV-GVKKTQ 651
LC + G ++A SMK + G+ +T+
Sbjct: 520 LCAC-NHAGLVDEAKRYFNSMKEMFGIDRTE 549
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/546 (23%), Positives = 219/546 (40%), Gaps = 102/546 (18%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V +F + VL + D G +VH+ + TG V V N+L+ MY G
Sbjct: 1 MRAEGVCCNEFALPVVL---KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD + ER+ V+WN +++ Y +N
Sbjct: 58 MDDARRVFD------------------------------EAGSERNAVSWNGLMSAYVKN 87
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+A+ +F M+ S ++P +F + ++AC + G+Q+HA ++R ++
Sbjct: 88 DQCGDAIQVFGEMVW-SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 146
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+ Y K+G V+IA IF+ + D
Sbjct: 147 ANALVDMYVKMGRVDIASV---------------------------------IFEKMPDS 173
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVV+W A++ G NG + A+EL M G PN + LS++L + + D G+QIH
Sbjct: 174 DVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIH 233
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+++ S + L+ MY+K ++ A +VF+ + R + + W ++I + G
Sbjct: 234 GFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCSHGGRH 292
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTH--------------------------GGL 529
+EA +F + + G+ + T VL + GL
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 530 VEQGQRYYNMMKNVHKIKPTPS----HFASMVDLLGRAGLLQEAYNFIENM---PLEPDV 582
++ + + + + S SM+ L + + A M LEPD
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWEDAANIRKS 641
SLL+AC + GK L+ + ++ A +AL Y+ CG EDA S
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 472
Query: 642 MKYVGV 647
+ GV
Sbjct: 473 LPERGV 478
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/779 (35%), Positives = 413/779 (53%), Gaps = 98/779 (12%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P EF ++ ++ + SRN G+ VHA +++ G VF N+L++ Y K
Sbjct: 196 SGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK------ 249
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
GR+D+A +F MP+ D VSW +I G
Sbjct: 250 -------------------------MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHD 284
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
AI + ++M ++P F ++S+L +C G G+++H F++K + L
Sbjct: 285 HRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK + LD A FD M RD++ WN
Sbjct: 345 VDMYAK-------------------------------NHFLDDAMKVFDWMSHRDLILWN 373
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
++I+G S G EA +F + K+ L ++ TLA+ L + A+LE +Q+HA +
Sbjct: 374 ALISGCSHGGRHDEAFSIFYGLRKEG-LGVNRTTLAAVLKSTASLEAASATRQVHALAEK 432
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F V N LI D Y K + A
Sbjct: 433 IGFIFDAHVVNGLI---------------------------------DSYWKCSCLSDAI 459
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+F+ D++A T+M+ Q + A++LF M+R+G +P+ + LS++L+ +SL+
Sbjct: 460 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ + GKQ+HA ++ S NAL+ Y+K G+I A F+ + R VSW++MI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERG-VVSWSAMI 578
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
LAQHG G+ A++LF RM++ GI P+HIT VL AC H GLV++ +RY+N MK + I
Sbjct: 579 GGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGI 638
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
T H++ M+DLLGRAG L +A + +MP + + WG+LL A RVHK+ +LGK+AAE
Sbjct: 639 DRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAE 698
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL ++EP+ SG + L N Y+S G W + A +RK MK +KK SWV++++KVH F
Sbjct: 699 KLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFI 758
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D HP IY+K+ ++ D + + G++P+ LHD++ KE +L HHSE+LA+AF
Sbjct: 759 VGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFA 818
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+STP +R+ KNLR+C DCH A KFI +V REI++RD RFHHF+ G CSC DYW
Sbjct: 819 LLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 177/632 (28%), Positives = 285/632 (45%), Gaps = 118/632 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM-PVKTLCSWNTILSAY 89
+G VHA + G VF+ N+L+ Y + A++VFDE + SWN ++SAY
Sbjct: 118 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAY 177
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
K ++ G +AI++F EMV + PT+F +
Sbjct: 178 VKN----------------------------DQCG---DAIQVFGEMVWSGIQPTEFGFS 206
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
V+ +CT ++ AG++VH+ VV+ G V N+L++MY K+G +A +F+ M
Sbjct: 207 CVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS 266
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V SW N++I+G NG+D A+ + M
Sbjct: 267 DVVSW-------------------------------NALISGCVLNGHDHRAIELLLQM- 294
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K S L P+ F L+S L ACA LG+QIH ++I+ D+ +G L+ YAK
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK---- 350
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
LD A ++FD + RD++ W A++ G
Sbjct: 351 --------------------NHFLD---------DAMKVFDWMSHRDLILWNALISGCSH 381
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G + +A +F + +EG N TL+A+L ++SL + +Q+HA A + G V
Sbjct: 382 GGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHV 441
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N LI Y K ++ A RVF + ++ TSMI AL+Q GE AI+LF ML G
Sbjct: 442 VNGLIDSYWKCSCLSDAIRVFEECS-SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 500
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT--PSHFA--SMVDLLGRAGL 565
++PD +L AC EQG++ + H IK FA ++V + G
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVH-----AHLIKRQFMSDAFAGNALVYTYAKCGS 555
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDL-GKIAAEKLLLIEPDNSGAYS 620
+++A ++P E VV+W +++ H + L+L G++ E I P++ S
Sbjct: 556 IEDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG---INPNHITMTS 611
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYV-GVKKTQ 651
LC + G ++A SMK + G+ +T+
Sbjct: 612 VLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTE 642
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 21/185 (11%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T+S L+ ++ +L G +HA+ L+SG +SL N LI+ YSK ARRVF+ I
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEI 63
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
VSW+S++ A + +GL AIQ F M G+ + VL L Q
Sbjct: 64 P-DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQ- 121
Query: 534 QRYYNMMKNVHKIKPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
VH + + F S +V + G G + +A + E + V+W
Sbjct: 122 ---------VHAM-AMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWN 171
Query: 587 SLLSA 591
L+SA
Sbjct: 172 GLMSA 176
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 279/807 (34%), Positives = 431/807 (53%), Gaps = 106/807 (13%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHL-SVFLKNSLMNFYAKTESISYAKKVFDEM--- 74
L + L +R F+G + HAR+ + V+ NS+++ YA+ A F+E
Sbjct: 76 FLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLST 135
Query: 75 -----------PVKTLCS-----------------------WNTILSAYAKQGRLDLACE 100
PV C + + Y++ G + LAC
Sbjct: 136 SFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACN 195
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+F+ M RD +W +I + G+ A+ +F EM V T++S+L C L D
Sbjct: 196 LFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDD 255
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
+ +G +H + +K GL + V N+L+NMYAK G+ A+ +F
Sbjct: 256 IISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIF----------------- 298
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
+QM RD+V+WNS++A + QN ALG++ N + + PD T
Sbjct: 299 --------------NQMKVRDIVSWNSLLAAFEQNKKPVIALGVY-NKMHSIGVVPDLLT 343
Query: 281 LASTLSACANLEKLKLGKQIHAYIIR-TEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
L S S A L + IH ++ R F +GNA+I
Sbjct: 344 LVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAII------------------- 384
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
D Y K+G I AR++F+ L +DV++W +++ GY QNGL +A+++
Sbjct: 385 --------------DMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDV 430
Query: 400 FRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
+ SM G PN T ++L+ S L +L G + H +++ + VS L+ MY
Sbjct: 431 YSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYG 490
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K G + A +F + Q +VSW ++I HG G +A++LF+ M G+KPDHIT+V
Sbjct: 491 KCGKLADALSLFYEVP-HQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFV 549
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
+L+AC+H GLV++GQ + +M+ + I+P+ H+ MVDL GRAG L++A+NF++NMP+
Sbjct: 550 SLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPV 609
Query: 579 EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
PDV WG+LL ACR+H+N++L + ++ LL +E +N G Y L N+Y+ G WE +
Sbjct: 610 RPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEV 669
Query: 639 RKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDT 698
R + G+KKT G+S +++ K+ VF + HP+ + IY+++ + ++K +G+VPD
Sbjct: 670 RSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDY 729
Query: 699 ASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKL 758
VL DVE+D KE +L HSE+LA+AFG+ISTP TTL+I KNLRVC DCH+A KFI K+
Sbjct: 730 NFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKI 789
Query: 759 VDREIVVRDATRFHHFKKGLCSCRDYW 785
+REI+VRD+ RFHHFK G+CSC DYW
Sbjct: 790 TEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/635 (26%), Positives = 288/635 (45%), Gaps = 126/635 (19%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ K +HA ++ G S+FL L+N YA I +A+ FD++ K + +WN+++SAYA
Sbjct: 58 LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYA 117
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT-QFTVT 149
+ IG F A+ F E + L + +T
Sbjct: 118 R-------------------------------IGHFHAAVDCFNEFLSTSFLQSDHYTFP 146
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
V+ +C G+L G+KVH V+K G V + S ++ Y++ G +A +FD M ++
Sbjct: 147 PVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIR 203
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ +WN +MI+G+ NG EAL +F M
Sbjct: 204 DIGTWN-------------------------------AMISGFYLNGKVAEALEVFDEM- 231
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ S+ D T++S L C L+ + G IH Y I+ + V NALI+ YAK G
Sbjct: 232 RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFG-- 289
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
++ A IF+ ++ RD+V+W ++L +EQ
Sbjct: 290 -------------------------------ELRSAETIFNQMKVRDIVSWNSLLAAFEQ 318
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EASSLS 448
N A+ ++ M G P+ TL ++ SV++ L + + IH R ++
Sbjct: 319 NKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIA 378
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ NA+I MY+K G I++AR+VF + + + +SW S+I +Q+GL EAI ++ M
Sbjct: 379 LGNAIIDMYAKLGFIDSARKVFEGLPVK-DVISWNSLITGYSQNGLANEAIDVYSSMRYY 437
Query: 509 -GIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G P+ T+V +LTA + G ++QG + + ++KN S +VD+ G+ G L
Sbjct: 438 SGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS--TCLVDMYGKCGKL 495
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHK-NLDLGKIAAE-KLLLIEPDNSGAYSALCN 624
+A + +P + V+W +++S +H L K+ E + ++PD + +
Sbjct: 496 ADALSLFYEVPHQSS-VSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPD----HITFVS 550
Query: 625 LYSSC--------GKW-----EDAANIRKSMKYVG 646
L S+C G+W ++ IR S+K+ G
Sbjct: 551 LLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYG 585
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/647 (40%), Positives = 389/647 (60%), Gaps = 71/647 (10%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + +L CT LG L GK VH+ ++ + + + NS+L MYAK G
Sbjct: 89 PDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGS------- 141
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA- 261
L++AR FD+M +DVVTW SMI GYSQ+GY A
Sbjct: 142 ------------------------LEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSAT 177
Query: 262 --LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
L +F M++D L+P++F L+S + C L GKQIH
Sbjct: 178 TALVLFLEMVRDG-LRPNEFALSSLVKCCGFLGSCVDGKQIHG----------------- 219
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
C K G E NV ++L+D Y + G++ +R +FD L ++ V+
Sbjct: 220 --CCWKYGFQE--------------NVFVGSSLVDMYARCGELRESRLVFDELESKNEVS 263
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + G ++A+ LF M REG +T SA+L SS+ SL+ GK +HA +
Sbjct: 264 WNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMM 323
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+SG+ V N L+ MY+K+GNI A++VF+ + + + VS SM++ AQHGLG+EA+
Sbjct: 324 KSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSMLIGYAQHGLGKEAV 382
Query: 500 QLFERM-LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+LFE M L + I+P+ IT++ VLTAC+H GL+++G Y+ +MK + ++P SH+ ++VD
Sbjct: 383 ELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVD 441
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
L GRAGLL +A +FIE MP+EP+ WG+LL A ++HKN ++G AA+K+L ++P GA
Sbjct: 442 LFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGA 501
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
++ L N+Y+S G+W+D A +RK MK G+KK SWV+I+N VH+F D HPQ++ +
Sbjct: 502 HTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKV 561
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y + +IKE+G+VPDT+ V V++ KE L++HSEKLA+AF L++T + +RI
Sbjct: 562 YEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRI 621
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
MKN+RVC DCHSAIK++ +V REI+VRD RFHHF+ G CSCRDYW
Sbjct: 622 MKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 218/478 (45%), Gaps = 94/478 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GKLVH ++ + +KNS++ YAK S+ A++VFDEM VK + +W ++++ Y++
Sbjct: 110 GKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQ 169
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + S TT +V +F+EMV+D + P +F ++S+
Sbjct: 170 DGY---------------ASSATTALV-------------LFLEMVRDGLRPNEFALSSL 201
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ C LG GK++H K G V V +SL++MYA+ G+ ++ VFD + KN
Sbjct: 202 VKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNE 261
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW N++I+G+++ G EALG+F M ++
Sbjct: 262 VSW-------------------------------NALISGFARKGEGEEALGLFVKMQRE 290
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+FT ++ L + + L+ GK +HA+++++ G VGN L+ YAK G +
Sbjct: 291 -GFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICD 349
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+K +FD L DVV+ +ML+GY Q+G
Sbjct: 350 AKK---------------------------------VFDRLVKVDVVSCNSMLIGYAQHG 376
Query: 392 LNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
L K+AVELF M+ +PN+ T ++L+ S LD G + G LS
Sbjct: 377 LGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHY 436
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ ++ +AG ++ A+ + W +++ A H E +++LEL
Sbjct: 437 TTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLEL 494
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 192/415 (46%), Gaps = 74/415 (17%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+++ + SL+PD+ L C L KLK GK +H +++ ++F + N+++ YAK
Sbjct: 80 DLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKC 139
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +EIA+++ ++ + +DVV WT+M+ G
Sbjct: 140 GSLEIARQVFDEMCV---------------------------------KDVVTWTSMITG 166
Query: 387 YEQNGLNKDAVE---LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
Y Q+G A LF MVR+G +PN + LS+++ L S GKQIH + G
Sbjct: 167 YSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGF 226
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
++ V ++L+ MY++ G + +R VF+ + + E VSW ++I A+ G GEEA+ LF
Sbjct: 227 QENVFVGSSLVDMYARCGELRESRLVFDELESKNE-VSWNALISGFARKGEGEEALGLFV 285
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHK----------------- 545
+M G TY +L + + G +EQG+ + +MMK+ K
Sbjct: 286 KMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSG 345
Query: 546 -IKPTPSHFASMVD---------LLGRA--GLLQEAYNFIENMPL----EPDVVAWGSLL 589
I F +V L+G A GL +EA E M L EP+ + + S+L
Sbjct: 346 NICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVL 405
Query: 590 SACRVHKNLDLGKIAAE--KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+AC LD G E K +EP S Y+ + +L+ G + A + + M
Sbjct: 406 TACSHAGLLDEGLYYFELMKKYGLEPKLS-HYTTVVDLFGRAGLLDQAKSFIEEM 459
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ LL S+ + + GK +HA ++K G L ++ N+L++ YAK+ +I AKKVFD +
Sbjct: 299 YSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLV 358
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ S N++L YA+ G A E+F M
Sbjct: 359 KVDVVSCNSMLIGYAQHGLGKEAVELFEEM------------------------------ 388
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+ ++ P T SVL +C+ G L G + K GL ++ ++++++ + G
Sbjct: 389 MLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGL 448
Query: 196 EMMAKAVFDGMRLK-NVSSWNVVV 218
AK+ + M ++ N + W ++
Sbjct: 449 LDQAKSFIEEMPIEPNATIWGALL 472
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/701 (37%), Positives = 395/701 (56%), Gaps = 65/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ YAK G + A ++F + RD V+W+ II + G + A+ +F EM ++ P
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ T+ S+L +C L L GK +H F VK + ++ +L++MYAK G
Sbjct: 430 RVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG---------- 479
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
A F++M RD+VTWNS+I GY+Q G + A+ M
Sbjct: 480 ---------------------FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDM 518
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F L+ S++ PD T+ + ACA L L G IH I++ F++ V NALI YA
Sbjct: 519 FYK-LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYA 577
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G + A+ + N FT +D V W ++
Sbjct: 578 KCGSLPSAEFL--------FNKTDFT------------------------KDEVTWNVII 605
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y QNG K+A+ F M E PN+ T ++L ++ LA+ G HA ++ G
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S+ V N+LI MY+K G + + ++FN + ++TVSW +M+ A HG G+ AI LF
Sbjct: 666 SNTLVGNSLIDMYAKCGQLXYSEKLFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSL 724
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M E ++ D +++V VL+AC H GLVE+G++ ++ M + + IKP H+A MVDLLGRAG
Sbjct: 725 MQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG 784
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L E FI+ MP+EPD WG+LL +CR+H N+ LG++A + L+ +EP N + L +
Sbjct: 785 LFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSS 844
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+ G+W DA R M +G+KKT G SWV+++NKVH F V D HPQ ++++
Sbjct: 845 IYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNT 904
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++++++G+VPD + VL +VEE+ KE L HSE+LAI F L++TP +T++I+KNLRV
Sbjct: 905 LLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRV 964
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ KFI K+ R I+VRDATRFHHF+ G+CSC DYW
Sbjct: 965 CADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 234/508 (46%), Gaps = 71/508 (13%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ Y+K G L A EVF+ MP RD V+W +I ++ A+ F M V P+
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
++ ++ L ++ + +H +V + S V +N L+++Y+K GD
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGD--------- 278
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+D+AR FDQM+++D V+W +M+AGY+ NG E L +
Sbjct: 279 ----------------------VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLEL 316
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M K +++ +K + S A A L+ GK+IH ++ D+
Sbjct: 317 FDKM-KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDS------------- 362
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+++ T L+ Y K G+ A+++F L+ RD+VAW+A++
Sbjct: 363 --------------------DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAII 402
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Q G ++A+ LF+ M + KPN TL ++L + L+ L GK IH +++
Sbjct: 403 AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD 462
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S LS AL++MY+K G AA FN + R + V+W S+I AQ G AI +F +
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLINGYAQIGDPYNAIDMFYK 521
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-SMVDLLGRA 563
+ I PD T VGV+ AC ++QG + ++ V + H +++D+ +
Sbjct: 522 LRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDCHVKNALIDMYAKC 579
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G L A D V W +++A
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 34/250 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H I+K G +KN+L++ YAK S+ A+ +F++
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDF--------------- 594
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+D V+W II Y + G K AI F +M + P T SV
Sbjct: 595 ---------------TKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSV 639
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + L G H+ +++ G V NSL++MYAK G ++ +F+ M K+
Sbjct: 640 LPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDT 699
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
SWN ++S + G D A A F M ++ D V++ S+++ G E +F +
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHS 759
Query: 268 MLKDSSLKPD 277
M +KPD
Sbjct: 760 MSDKYHIKPD 769
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN + +S L A+L G HA II+ G + + NSL++ YAK
Sbjct: 631 PNSVTFVSVLPAAAYLAAFR-------EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQ 683
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ Y++K+F+EM K SWN +LS YA G D A +F+LM DSVS+ +++
Sbjct: 684 LXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSA 743
Query: 120 YNEIGRFKNAIRMFVEM 136
G + ++F M
Sbjct: 744 CRHXGLVEEGRKIFHSM 760
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/683 (38%), Positives = 406/683 (59%), Gaps = 43/683 (6%)
Query: 16 YAHLLQSNLKSR-NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
+A LL S +KS+ + + VHA +IK G +F++N L++ Y+K S+ ++VFD+M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + +WN++++ K G LD A +F MP RD +W +++ + + R + A+ F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M ++ + +++ SVL++C+ L D++ G +VHS + K+ V + ++L++MY+K G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ V D R+ FD+M +R+VV+WNS+I + Q
Sbjct: 202 N------VNDAQRV-------------------------FDEMGDRNVVSWNSLITCFEQ 230
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATG 313
NG EAL +F ML +S ++PD+ TLAS +SACA+L +K+G+++H +++ +
Sbjct: 231 NGPAVEALDVFQMML-ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ NA + YAK ++ A+ I + I NVIA T+++ GY AR +F +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIR--NVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+R+VV+W A++ GY QNG N++A+ LF + RE P +Y+ + +L + LA L G Q
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 434 IHASALR------SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
H L+ SGE + V N+LI MY K G + VF + R + VSW +MI+
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMII 466
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQ+G G EA++LF MLE G KPDHIT +GVL+AC H G VE+G+ Y++ M +
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ MVDLLGRAG L+EA + IE MP++PD V WGSLL+AC+VH+N+ LGK AEK
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEK 586
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL +EP NSG Y L N+Y+ GKWED N+RKSM+ GV K G SW++IQ HVF V
Sbjct: 587 LLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMV 646
Query: 668 EDWLHPQRDAIYNKMAKIWDEIK 690
+D HP++ I++ + + E++
Sbjct: 647 KDKSHPRKKQIHSLLDILIAEMR 669
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/701 (37%), Positives = 412/701 (58%), Gaps = 35/701 (4%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S+ A LD A VFNL+P ++ + + + + ++ M +
Sbjct: 62 VISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVD 121
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+F+ +L + + + L G ++H K G V L+ MYA G
Sbjct: 122 RFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACG---------- 171
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
R+ AR FD+M RDVVTW+ MI GY Q+G +AL +
Sbjct: 172 ---------------------RIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M K+ +++PD+ L++ LSAC L GK IH +I+ + +AL++ YA
Sbjct: 211 FEEM-KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYA 269
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
G +++A + E+ ++ N++A T ++ GY K+G I AR +F+ + +D+V W+AM+
Sbjct: 270 SCGSMDLALNLFEK--MTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMI 327
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY ++ ++A+ LF M G KP+ T+ ++++ + L +LD K IH ++G
Sbjct: 328 SGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFG 387
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+L ++NALI MY+K G++ ARR+F+ + R+ +SWT MI A A HG A++ F +
Sbjct: 388 GALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHGDAGSALRFFHQ 446
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + I+P+ IT+VGVL AC+H GLVE+G++ + M N H I P H+ MVDL GRA
Sbjct: 447 MEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRAN 506
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
LL+EA +E MPL P+V+ WGSL++ACRVH ++LG+ AA++LL ++PD+ GA+ L N
Sbjct: 507 LLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSN 566
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+ +WED +RK MK+ G+ K +G S ++ N++H F V D H D IY K+ +
Sbjct: 567 IYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYE 626
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++K +G+ P+T S+L D+EE+ K++++ HSEKLA+ +GL+ + +RI+KNLRV
Sbjct: 627 VVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRV 686
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ IK K+ +REIVVRD TRFHH+K G+CSC+DYW
Sbjct: 687 CEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 256/506 (50%), Gaps = 63/506 (12%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS--------YAKKVFDEMP- 75
+S P LV+ R+ GL + F L+ ++ +S+ AK FD P
Sbjct: 99 RSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPF 158
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
V+T ++ YA GR+ A +F+ M +RD V+W+ +I Y + G F +A+ +F E
Sbjct: 159 VQT-----GLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEE 213
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M V P + +++VL++C G+LS GK +H F+++ + ++ ++L+ MYA G
Sbjct: 214 MKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGS 273
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A +F+ M KN+ + +V+ + G+++ AR+ F+QM+++D+V W++MI+GY+++
Sbjct: 274 MDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAES 333
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F N ++ +KPD+ T+ S ++ACA+L L K IH ++ + F P+
Sbjct: 334 DSPQEALNLF-NEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPI 392
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NALI YAK G +E A++I ++ + NVI++T ++ + GD G A R F + D
Sbjct: 393 NNALIEMYAKCGSLERARRIFDK--MPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDE 450
Query: 376 DV----VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
++ + + +L GL ++ ++F SM+ E +N T
Sbjct: 451 NIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINE----HNIT----------------P 490
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
K +H ++ ++ +A + A + + + W S++ A
Sbjct: 491 KHVH--------------YGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRV 536
Query: 492 HG---LGEEAIQLFERMLELGIKPDH 514
HG LGE A + R+LEL PDH
Sbjct: 537 HGEIELGEFAAK---RLLEL--DPDH 557
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 79/349 (22%)
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL-ITMYSKAGNINAARRVFNLIHWR 476
+ S SS SL H KQ+HA LRS S S+ L I+ + + +++ A VFNLI +
Sbjct: 26 LFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIP-K 84
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT----------- 525
ET + L++ E+ + ++ERM G+ D ++ +L A +
Sbjct: 85 PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI 144
Query: 526 HG------------------------GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
HG G + + + ++ M H+ T ++ M+D
Sbjct: 145 HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKM--FHRDVVT---WSIMIDGYC 199
Query: 562 RAGLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKI----AAEKLLLIEPD 614
++GL +A E M +EPD + ++LSAC NL GK+ E ++++P
Sbjct: 200 QSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPH 259
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMK----YVGVKKTQGFSWV-QIQNKVHVF---- 665
SAL +Y+SCG + A N+ + M G+S + QI+N VF
Sbjct: 260 ---LQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMV 316
Query: 666 ------------GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
G + PQ + +++E++ +G PD ++L
Sbjct: 317 KKDLVCWSAMISGYAESDSPQ------EALNLFNEMQSLGIKPDQVTML 359
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/643 (40%), Positives = 385/643 (59%), Gaps = 68/643 (10%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + + +L CT L L G+ +H+ + + + + N +LNMYAK G
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGS------- 155
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ A+ FD+M +D+V+W +I+GYSQ+G EAL
Sbjct: 156 ------------------------LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEAL 191
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ML +P++FTL+S L A G+Q+HA+ ++ +D
Sbjct: 192 ALFPKMLH-LGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD------------ 238
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+NV ++LLD Y + + A+ IF+SL ++VV+W A
Sbjct: 239 ---------------------MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNA 277
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ + G + + LF M+R+G +P ++T S++L+ +SS SL+ GK +HA ++SG
Sbjct: 278 LIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASS-GSLEQGKWVHAHVIKSG 336
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ N LI MY+K+G+I A++VF + +Q+ VSW S+I AQHGLG EA+QLF
Sbjct: 337 GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLF 395
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E+ML+ ++P+ IT++ VLTAC+H GL+++GQ Y+ +MK HKI+ +H ++VDLLGR
Sbjct: 396 EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGR 454
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L EA FIE MP++P WG+LL ACR+HKN+DLG AAE++ ++P +SG + L
Sbjct: 455 AGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 514
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+S G+ DAA +RK MK GVKK SWV+I+N+VHVF D HP R+ I
Sbjct: 515 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 574
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
KI +IKE+G+VPDT+ VL + + +E L++HSEKLA+AF ++ TP T+RI KN+
Sbjct: 575 EKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 634
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+C DCHSA KF +++ REI+VRD RFHHF G+CSCRDYW
Sbjct: 635 RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 205/427 (48%), Gaps = 68/427 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N IL+ YAK G L+ A ++F+ MP +D VSWT +I Y++ G+ A+ +F +M+
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203
Query: 143 PTQFTVTSVL-ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT++S+L AS T D G+++H+F +K G V+V +SLL+MYA+ AK
Sbjct: 204 PNEFTLSSLLKASGTGPSD-HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKV 262
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F+ + KNV SWN ++IAG+++ G
Sbjct: 263 IFNSLAAKNVVSWN-------------------------------ALIAGHARKGEGEHV 291
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F ML+ +P FT +S L ACA+ L+ GK +HA++I++ +GN LI
Sbjct: 292 MRLFXQMLRQ-GFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G ++ A+K +F L +D+V+W
Sbjct: 350 MYAKSGSIKDAKK---------------------------------VFRRLVKQDIVSWN 376
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+++ GY Q+GL +A++LF M++ +PN T ++L+ S LD G+ +
Sbjct: 377 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 436
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ ++ ++ + +AG +N A + + + W +++ A H + +
Sbjct: 437 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYA 496
Query: 502 FERMLEL 508
E++ EL
Sbjct: 497 AEQIFEL 503
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 65/333 (19%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
P EF + LL+++ + G+ +HA +K G ++V + +SL++ YA+ + AK
Sbjct: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAK 261
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+F+ + K + SWN +++ +A++G + +
Sbjct: 262 VIFNSLAAKNVVSWNALIAGHARKGEGE-------------------------------H 290
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+R+F +M++ PT FT +SVLA C + G L GK VH+ V+K+G + N+L++
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK G AK VF + +++ SWN S+
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWN-------------------------------SI 378
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+GY+Q+G EAL +F MLK + ++P++ T S L+AC++ L G+ + + +
Sbjct: 379 ISGYAQHGLGAEALQLFEQMLK-AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 437
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+A ++ + G + A K +E+ I
Sbjct: 438 IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 470
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT++ YAK G + A +VF + +D VSW +II Y + G A+++F +M++ +V
Sbjct: 345 NTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQ 404
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + T SVL +C+ G L G+ + K + V +++++ + G A
Sbjct: 405 PNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKF 464
Query: 203 FDGMRLKNVSS-WNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ M +K ++ W ++ +DL +Q+ E D
Sbjct: 465 IEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELD 504
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 292/782 (37%), Positives = 440/782 (56%), Gaps = 71/782 (9%)
Query: 11 SPLEF--YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+P +F + LL ++ R+ F GK +HA +K + S +L N +N Y+K +SYA+
Sbjct: 4 TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
F + S+N I+ AYAK ++ +A ++F+ +P D+VS+ T+I Y +
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ +F M + FT++ ++A+C DL K++H F V G +V N+ +
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y+K G A +VF GM D++ RD V+WNSM
Sbjct: 182 YYSKGGLLREAVSVFYGM----------------------------DEL--RDEVSWNSM 211
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I Y Q+ +AL ++ M+ K D FTLAS L+A +L+ L G+Q H +I+
Sbjct: 212 IVAYGQHKEGAKALALYKEMIF-KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
F VG+ LI Y+K GG DG + + ++
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGC------------------------DG------MYDSEKV 300
Query: 369 FDSLRDRDVVAWTAMLVGYEQNG-LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F + D+V W M+ GY N L+++AV+ FR M R G +P++ + + S S+L+S
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 428 LDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
KQIH A++S S+ +SV+NALI++Y K+GN+ AR VF+ + VS+ MI
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMI 419
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
AQHG G EA+ L++RML+ GI P+ IT+V VL+AC H G V++GQ Y+N MK KI
Sbjct: 420 KGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKI 479
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+P H++ M+DLLGRAG L+EA FI+ MP +P VAW +LL ACR HKN+ L + AA
Sbjct: 480 EPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
+L++++P + Y L N+Y+ KWE+ A++RKSM+ ++K G SW++++ K HVF
Sbjct: 540 ELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFV 599
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDT--ASVLHDVEEDVKEQM-LRHHSEKLAI 723
EDW HP + + ++ ++K++G+V D A V D + E+M L HHSEKLA+
Sbjct: 600 AEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAV 659
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
AFGL+ST + L ++KNLR+C DCH+AIKF+ + REI+VRD RFH FK G CSC D
Sbjct: 660 AFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGD 719
Query: 784 YW 785
YW
Sbjct: 720 YW 721
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 220/529 (41%), Gaps = 94/529 (17%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E P P ++ Y L+ +R F ++ R+ K G + F + L+ A
Sbjct: 99 EIPQPDTVS-----YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIA--ACC 151
Query: 62 ESISYAKKV--------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN-RDSVS 112
+ + K++ FD N ++ Y+K G L A VF M RD VS
Sbjct: 152 DRVDLIKQLHCFSVSGGFDSYSSVN----NAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++IV Y + A+ ++ EM+ FT+ SVL + T+L L G++ H ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
K G +V + L++ Y+K G ++D ++
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGG---CDGMYDSEKV------------------------ 300
Query: 233 QFDQMIERDVVTWNSMIAGYSQN-GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
F +++ D+V WN+MI+GYS N EA+ F M + +PD + SAC+NL
Sbjct: 301 -FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNL 358
Query: 292 EKLKLGKQIHAYIIRTEFDATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
KQIH I++ + V NALIS Y K G ++ A+ + ++ + LN ++F
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR--MPELNAVSF- 415
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
M+ GY Q+G +A+ L++ M+ G P
Sbjct: 416 ------------------------------NCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRS----GEASSLSVSNALITMYSKAGNINAA 466
N T A+LS + +D G++ + + EA S +I + +AG + A
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS---CMIDLLGRAGKLEEA 502
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERMLELGIKP 512
R + + ++ +V+W +++ A +H L E A M L P
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/781 (35%), Positives = 450/781 (57%), Gaps = 69/781 (8%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S ISP ++ + L + KSR G +H I+K G +F++NSL++FYA+
Sbjct: 128 SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC----- 182
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
G LD A +VF+ M R+ VSWT++I Y
Sbjct: 183 --------------------------GELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 127 KNAIRMFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
K+A+ +F MV+D+ V P T+ V+++C L DL G+KV++F+ +G+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--------- 267
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
+V D M++ +V +++ +D+A+ FD+ ++
Sbjct: 268 ------EVNDLMVS----------------ALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N+M + Y + G EALG+F N++ DS ++PD+ ++ S +S+C+ L + GK H Y++
Sbjct: 306 NAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R F++ + NALI Y K + A +I ++ +S V+ + +++ GY++ G++ A
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDR--MSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSS 424
F+++ ++++V+W ++ G Q L ++A+E+F SM +EG + T+ ++ S
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +LD K I+ ++G + + L+ M+S+ G+ +A +FN + R + +WT+
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTA 541
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
I A+A G E AI+LF+ M+E G+KPD + +VG LTAC+HGGLV+QG+ + M +H
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+ MVDLLGRAGLL+EA IE+MP+EP+ V W SLL+ACRV N+++ A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AEK+ ++ P+ +G+Y L N+Y+S G+W D A +R SMK G++K G S +QI+ K H
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F D HP+ I + ++ +G VPD ++VL DV+E K ML HSEKLA+A
Sbjct: 722 FTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMA 781
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+GLIS+ + TT+RI+KNLRVC+DCHS KF K+ +REI++RD RFH+ ++G CSC D+
Sbjct: 782 YGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Query: 785 W 785
W
Sbjct: 842 W 842
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 69/379 (18%)
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+NS+I GY+ +G EA+ +F M+ +S + PDK+T LSACA G QIH I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
++ + V N+L+ YA+ G ++ A+K+ ++ +S NV++
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE--MSERNVVS---------------- 202
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSS 423
WT+M+ GY + KDAV+LF MVR E PN+ T+ ++S +
Sbjct: 203 ---------------WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 424 SLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
L L+ G++++A SG E + L VS AL+ MY K I+ A+R+F+ +
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLC- 305
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVE 531
+M + GL EA+ +F M++ G++PD I+ + +++C+ HG ++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 532 QGQRYY--------NMMKNVHK-----------IKPTPSHFASMVDLLGRAGLLQEAYNF 572
G + +M H+ T + S+V G + A+
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 573 IENMPLEPDVVAWGSLLSA 591
E MP E ++V+W +++S
Sbjct: 426 FETMP-EKNIVSWNTIISG 443
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/638 (40%), Positives = 383/638 (60%), Gaps = 69/638 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++L CT L L+ GK +H+ ++ + + + N+LLN+YAK GD
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGD-------------- 65
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
L AR FD+M RDVVTW ++I GYSQ+ +AL + ML
Sbjct: 66 -----------------LVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEML 108
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKL--GKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+ LKP++FTLAS L A + + + G+Q+H +R +D+ N +SC
Sbjct: 109 R-IGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDS-----NVYVSC----- 157
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+LD Y + + A+ IFD + ++ V+W A++ GY
Sbjct: 158 -----------------------AILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGY 194
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+ G A LF +M+RE KP ++T S++L +S+ SL+ GK +HA ++ GE
Sbjct: 195 ARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVA 254
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V N L+ MY+K+G+I A++VF+ + +++ VSW SM+ +QHGLG+ A+Q FE ML
Sbjct: 255 FVGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHGLGKVALQRFEEMLR 313
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
I P+ IT++ VLTAC+H GL+++G+ Y++MMK + ++P SH+ +MVDLLGRAG L
Sbjct: 314 TRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLD 372
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
A FI MP++P WG+LL ACR+HKN++LG AAE + ++ G + L N+Y+
Sbjct: 373 RAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYA 432
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
G+W DAA +RK MK GVKK SWV+++N+VHVF +D HPQR I+N +I D
Sbjct: 433 LAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISD 492
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+IKE+G+VPD++ VL +++ +E L++HSEKLA+AF L++TP +T+RI KN+R+C D
Sbjct: 493 KIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGD 552
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CHSA KF+ KLV+REI+VRD RFHHF G CSC DYW
Sbjct: 553 CHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 201/412 (48%), Gaps = 67/412 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+L+ YAK G L A ++F+ M +RD V+WT +I Y++ R ++A+ + EM++ +
Sbjct: 54 NTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLK 113
Query: 143 PTQFTVTSVLASCTALG--DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
P QFT+ S+L + + +G D+ G+++H ++ G V V+ ++L+MYA+ A+
Sbjct: 114 PNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ 173
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+FD M KN SWN ++ AGY++ G +
Sbjct: 174 LIFDVMVSKNEVSWNALI-------------------------------AGYARKGQGDK 202
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A +F+NML++ ++KP FT +S L ACA++ L+ GK +HA +I+ VGN L+
Sbjct: 203 AFCLFSNMLRE-NVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLL 261
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
YAK G +E A+K+ FD L RDVV+W
Sbjct: 262 DMYAKSGSIEDAKKV---------------------------------FDRLAKRDVVSW 288
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+ML GY Q+GL K A++ F M+R PN+ T +L+ S LD G+ +
Sbjct: 289 NSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK 348
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+S ++ + +AG+++ A + + + + W +++ A H
Sbjct: 349 YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 133/296 (44%), Gaps = 68/296 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L+ S + S + G+ +H ++ G +V++ ++++ YA+
Sbjct: 114 PNQFTLASLLK-----AASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHH 168
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ +FD M K SWN +++ YA++G+ D
Sbjct: 169 LEEAQLIFDVMVSKNEVSWNALIAGYARKGQGD--------------------------- 201
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
A +F M+++ V PT FT +SVL +C ++G L GK VH+ ++K G V
Sbjct: 202 ----KAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+LL+MYAK G AK VFD + ++V SW
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSW----------------------------- 288
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
NSM+ GYSQ+G AL F ML+ + + P+ T L+AC++ L G+
Sbjct: 289 --NSMLTGYSQHGLGKVALQRFEEMLR-TRIAPNDITFLCVLTACSHAGLLDEGRH 341
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/725 (37%), Positives = 417/725 (57%), Gaps = 41/725 (5%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
LD + ++F+ + N + W T++ Y + + A+ ++ MV++ V P +T V+ +
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C GK++H V+K G V V N+L+NMYA G+ A+ +FD + + SW
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIER-------------------------------DVV 243
N +++ ++ G ++ A+ FDQM +R D+V
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMV 270
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W+++I+GY QNG EAL MF M + ++ D+ + S LSACA+L +K GK IH
Sbjct: 271 SWSALISGYEQNGMYEEALVMFIEM-NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGL 329
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+IR ++ + NALI Y+ G + AQK+ +G L+ I++ +++ G +K G +
Sbjct: 330 VIRMGIESYVNLQNALIHMYSGSGEIMDAQKLF--NGSHNLDQISWNSMISGCMKCGSVE 387
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR +FD + ++D+V+W+A++ GY Q+ + + LF M +P+ L +++S +
Sbjct: 388 KARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACT 447
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
LA+LD GK +HA ++G ++ + L+ MY K G + A VFN + + SW
Sbjct: 448 HLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME-EKGVSSWN 506
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
++I+ LA +GL E ++ +F M G+ P+ IT++GVL AC H GLV++G+ ++ M
Sbjct: 507 ALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEK 566
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
H I+P H+ MVDLLGRAGLL EA IE+MP+ PDV WG+LL AC+ H + ++G+
Sbjct: 567 HGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGER 626
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
KL+ ++PD+ G + L N+++S G WED +R MK GV KT G S ++ VH
Sbjct: 627 VGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVH 686
Query: 664 VFGVEDWLHP---QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
F D HP + + + N+MAK +K G+ PDT V D++E+ KE L HSEK
Sbjct: 687 EFLAGDKTHPWINKVEGMLNEMAK---RLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEK 743
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAFGL++ T +RIMKNLR+CNDCH+A K I K REIVVRD RFH+FK+G CS
Sbjct: 744 LAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACS 803
Query: 781 CRDYW 785
C DYW
Sbjct: 804 CMDYW 808
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 271/757 (35%), Positives = 421/757 (55%), Gaps = 101/757 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H ++K G V++ SL++ Y++ ++ A KVF +MPV+ + SWN ++S + +
Sbjct: 166 GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQ 225
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A+R+ M ++V TV+S+
Sbjct: 226 NGNV-------------------------------AEALRVLDRMKTEEVKMDTVTVSSM 254
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C D+ G VH +V+K GL V V+N+L+NMY+K G A+ VFDGM ++++
Sbjct: 255 LPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDL 314
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S WNS+IA Y QN ALG F ML
Sbjct: 315 VS-------------------------------WNSIIAAYEQNDDPVTALGFFKEMLF- 342
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF-DATGPVGNALISCYAKVGGVE 330
++PD T+ S S L ++G+ +H +++R + + +GNAL++ YAK+G ++
Sbjct: 343 VGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSID 402
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A+ + EQ L RDV++W ++ GY QN
Sbjct: 403 CARAVFEQ---------------------------------LPSRDVISWNTLITGYAQN 429
Query: 391 GLNKDAVELFRSMVREGPK--PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
GL +A++ + +M+ EG PN T ++L S + +L G +IH +++ +
Sbjct: 430 GLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVF 488
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V+ LI MY K G + A +F I ++ +V W ++I +L HG GE+A+QLF+ M
Sbjct: 489 VATCLIDMYGKCGRLEDAMSLFYEIP-QETSVPWNAIISSLGIHGHGEKALQLFKDMRAD 547
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+K DHIT+V +L+AC+H GLV++ Q ++ M+ ++IKP H+ MVDL GRAG L++
Sbjct: 548 GVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEK 607
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
AYN + NMP++ D WG+LL+ACR+H N +LG A+++LL ++ +N G Y L N+Y++
Sbjct: 608 AYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYAN 667
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
GKWE A +R + G++KT G+S V + + V VF + HPQ IY ++ + +
Sbjct: 668 VGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAK 727
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+K +G+VPD + VL DVEED KE++L HSE+LAI FG+ISTP + +RI KNLRVC DC
Sbjct: 728 MKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDC 787
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+A K+I K+ +REI+VRD+ RFHHFK G+CSC DYW
Sbjct: 788 HNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 204/443 (46%), Gaps = 76/443 (17%)
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V SCT +++ K++H+ ++ G + V + L+ +YA +GD
Sbjct: 57 VFRSCT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGD--------------- 98
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
L L+ F + +++ +WNSM++ Y + G +++ +L
Sbjct: 99 ----------------LSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLS 142
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S ++PD +T L AC +L G+++H ++++ F+ V +LI Y++ G VE
Sbjct: 143 LSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVE 199
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+A K +F + RDV +W AM+ G+ QN
Sbjct: 200 VAHK---------------------------------VFVDMPVRDVGSWNAMISGFCQN 226
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G +A+ + M E K + T+S+ML + + + G +H ++ G S + VS
Sbjct: 227 GNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVS 286
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NALI MYSK G + A+RVF+ + R + VSW S+I A Q+ A+ F+ ML +G+
Sbjct: 287 NALINMYSKFGRLQDAQRVFDGMEVR-DLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGM 345
Query: 511 KPDHITYVGVLTACTHGGLVEQ--GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+PD +T V + A G L ++ G+ + + ++ ++V++ + G +
Sbjct: 346 RPDLLTVVSL--ASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDC 403
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A E +P DV++W +L++
Sbjct: 404 ARAVFEQLP-SRDVISWNTLITG 425
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/643 (39%), Positives = 383/643 (59%), Gaps = 67/643 (10%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + + +L CT L L G+ +H+ + + + + N +LNMYAK G
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGS------- 155
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ A+ FD+M +D+V+W +I+GYSQ+G EAL
Sbjct: 156 ------------------------LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEAL 191
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ML +P++FTL+S L A G+Q+HA+ ++ +D
Sbjct: 192 ALFPKMLH-LGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD------------ 238
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+NV ++LLD Y + + A+ IF+SL ++VV+W A
Sbjct: 239 ---------------------MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNA 277
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ + G + + LF M+R+G +P ++T S++ + +S SL+ GK +HA ++SG
Sbjct: 278 LIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSG 337
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ N LI MY+K+G+I A++VF + +Q+ VSW S+I AQHGLG EA+QLF
Sbjct: 338 GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLF 396
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E+ML+ ++P+ IT++ VLTAC+H GL+++GQ Y+ +MK HKI+ +H ++VDLLGR
Sbjct: 397 EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGR 455
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L EA FIE MP++P WG+LL +CR+HKN+DLG AAE++ ++P +SG + L
Sbjct: 456 AGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 515
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+S G+ DAA +RK MK GVKK SWV+I+N+VHVF D HP R+ I
Sbjct: 516 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 575
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
KI +IKE+G+VPDT+ VL + + +E L++HSEKLA+AF ++ TP T+RI KN+
Sbjct: 576 EKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 635
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+C DCHSA KF +++ REI+VRD RFHHF G+CSCRDYW
Sbjct: 636 RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 205/427 (48%), Gaps = 67/427 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N IL+ YAK G L+ A ++F+ MP +D VSWT +I Y++ G+ A+ +F +M+
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203
Query: 143 PTQFTVTSVL-ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT++S+L AS T D G+++H+F +K G V+V +SLL+MYA+ AK
Sbjct: 204 PNEFTLSSLLKASGTGPSD-HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKV 262
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F+ + KNV SWN ++IAG+++ G
Sbjct: 263 IFNSLAAKNVVSWN-------------------------------ALIAGHARKGEGEHV 291
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F ML+ +P FT +S +ACA+ L+ GK +HA++I++ +GN LI
Sbjct: 292 MRLFLQMLRQ-GFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G ++ A+K +F L +D+V+W
Sbjct: 351 MYAKSGSIKDAKK---------------------------------VFRRLVKQDIVSWN 377
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+++ GY Q+GL +A++LF M++ +PN T ++L+ S LD G+ +
Sbjct: 378 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH 437
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ ++ ++ + +AG +N A + + + W +++ + H + +
Sbjct: 438 KIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYA 497
Query: 502 FERMLEL 508
E++ EL
Sbjct: 498 AEQIFEL 504
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 64/333 (19%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
P EF + LL+++ + G+ +HA +K G ++V + +SL++ YA+ + AK
Sbjct: 202 FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAK 261
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+F+ + K + SWN +++ +A++G + +
Sbjct: 262 VIFNSLAAKNVVSWNALIAGHARKGEGE-------------------------------H 290
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+R+F++M++ PT FT +SV +C + G L GK VH+ V+K+G + N+L++
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK G AK VF + +++ SWN S+
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWN-------------------------------SI 379
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+GY+Q+G EAL +F MLK + ++P++ T S L+AC++ L G+ + + +
Sbjct: 380 ISGYAQHGLGAEALQLFEQMLK-AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 438
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+A ++ + G + A K +E+ I
Sbjct: 439 IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPI 471
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT++ YAK G + A +VF + +D VSW +II Y + G A+++F +M++ +V
Sbjct: 346 NTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQ 405
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + T SVL +C+ G L G+ + K + V +++++ + G A
Sbjct: 406 PNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKF 465
Query: 203 FDGMRLKNVSS-WNVVV-SLHIHSGRLDLARAQFDQMIERD 241
+ M +K ++ W ++ S +H +DL +Q+ E D
Sbjct: 466 IEEMPIKPTAAVWGALLGSCRMHKN-MDLGVYAAEQIFELD 505
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/709 (35%), Positives = 410/709 (57%), Gaps = 12/709 (1%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++++Y+ + A V +P+ S++++I + F +I +F M ++P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ ++ C L GK++H +GL V S+ +MY + G A+ VFD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
M K+V + + ++ + G L+ +M IE ++V+WN +++G++++GY E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ MF + PD+ T++S L + + E L +G+ IH Y+I+ V +A+I
Sbjct: 236 AVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----D 376
Y K G V + Q + + G + G + A +F+ +++ +
Sbjct: 295 DMYGKSGHVYGIISLFNQ--FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+WT+++ G QNG + +A+ELFR M G KPN+ T+ +ML ++A+L HG+ H
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+R ++ V +ALI MY+K G IN ++ VFN++ + V W S++ + HG +
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN-LVCWNSLMNGFSMHGKAK 471
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
E + +FE ++ +KPD I++ +L+AC GL ++G +Y+ MM + IKP H++ M
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCM 531
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
V+LLGRAG LQEAY+ I+ MP EPD WG+LL++CR+ N+DL +IAAEKL +EP+N
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP 591
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y++ G W + +IR M+ +G+KK G SW+Q++N+V+ D HPQ D
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQID 651
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I KM +I E+++ G P+ LHDVEE +EQML HSEKLA+ FGL++TP+ T L
Sbjct: 652 QITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPL 711
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++KNLR+C DCH+ IKFI REI +RD RFHHFK G+CSC D+W
Sbjct: 712 QVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 222/465 (47%), Gaps = 43/465 (9%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H GL + F++ S+ + Y + + A+KVFD M K + + + +L AYA
Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
++G L+ + + M + + VSW I+ +N G K A+ MF ++ P Q
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
TV+SVL S L+ G+ +H +V+K GL V +++++MY K G ++F+
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQF----DQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+ N ++ +G +D A F +Q +E +VV+W S+IAG +QNG D EAL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + + +KP+ T+ S L AC N+ L G+ H + +R VG+ALI
Sbjct: 374 ELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + ++Q +F+ + +++V W +
Sbjct: 433 YAKCGRINLSQI---------------------------------VFNMMPTKNLVCWNS 459
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRS 441
++ G+ +G K+ + +F S++R KP+ + +++LS + D G K +
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
G L + ++ + +AG + A + + + ++ W +++
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/758 (34%), Positives = 424/758 (55%), Gaps = 105/758 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+++H ++K G +VF+ L++ YAK + +S A+ +F +
Sbjct: 181 GEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE---------------- 224
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
++ V WT ++ Y + G A+ F M V Q+T ++
Sbjct: 225 -------------FDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTI 271
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C+++ G++VH F+VK+G V V ++L++MYAK GD LKN
Sbjct: 272 LTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGD------------LKN- 318
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
A+ + M + DVV+WNS++ G+ ++G + EAL +F NM
Sbjct: 319 ------------------AKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM-HG 359
Query: 272 SSLKPDKFTLASTLSACANLEKLKLG----KQIHAYIIRTEFDATGPVGNALISCYAKVG 327
++K D +T S L+ C +G K +H II+T F+ V NAL+ YAK
Sbjct: 360 RNMKIDDYTFPSVLNCCV------VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKT- 412
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
GD+ A +F+ + ++DV++WT+++ GY
Sbjct: 413 --------------------------------GDMDCAYTVFEKMLEKDVISWTSLVTGY 440
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QN +++++++F M G P+ + ++++LS + L L+ GKQ+H ++SG S
Sbjct: 441 AQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQ 500
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
SV N+L+ MY+K G ++ A +F + + + ++WT++IV AQ+G G +++ ++ M+
Sbjct: 501 SVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAIIVGYAQNGKGRNSLKFYDAMVS 559
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G +PD IT++G+L AC+H GLV++G++Y+ M V+ IKP P H+A M+DL GR+G L
Sbjct: 560 SGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLD 619
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA ++ M ++PD W SLLSACRVH+NL+L + AA L +EP N+ Y L N+YS
Sbjct: 620 EAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYS 679
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ KW D A IRK MK G+ K G SW++I ++V+ F +D HP+ IY K+ +I
Sbjct: 680 ASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIIL 739
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
IKE G+VPD + LHD++++ KE L +HSEKLA+AFGL++ P + +RI KNLRVC D
Sbjct: 740 RIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGD 799
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CHSA+K+I ++ R I++RD+ FHHF++G CSC DYW
Sbjct: 800 CHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 289/544 (53%), Gaps = 70/544 (12%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
S++ N L+N +K+ ++ A+K+FD+MP K SWNT++S+Y GRL A E+F+
Sbjct: 64 SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS 123
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+ S++W++II Y + G A +F M + +QFT+ SVL C++LG + G+
Sbjct: 124 CKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEM 183
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+H FVVK G G V V L++MYAK A+ +F G+
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL-------------------- 223
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+FD+ ++ V W +M+ GY+QNG ++A+ F M ++ +++T + L+
Sbjct: 224 ------EFDR---KNHVLWTAMVTGYAQNGDGYKAVEFFRYM-HAQGVECNQYTFPTILT 273
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
AC+++ G+Q+H +I+++ F + V +AL+ YAK G
Sbjct: 274 ACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCG------------------- 314
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
D+ A+ + +++ D DVV+W +++VG+ ++GL ++A+ LF++M
Sbjct: 315 --------------DLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGR 360
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
K ++YT ++L+ + S++ K +H +++G + VSNAL+ MY+K G+++ A
Sbjct: 361 NMKIDDYTFPSVLNC-CVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
VF + ++ +SWTS++ AQ+ EE++++F M G+ PD +L+AC
Sbjct: 419 YTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAE 477
Query: 527 GGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
L+E G Q + + +K+ ++ + S + S+V + + G L +A +M ++ DV+ W
Sbjct: 478 LTLLEFGKQVHLDFIKS--GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVK-DVITW 534
Query: 586 GSLL 589
+++
Sbjct: 535 TAII 538
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/682 (37%), Positives = 392/682 (57%), Gaps = 73/682 (10%)
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SW ++I G A+R F + + ++PT+ + + SC+AL DL +G+ H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
G + V+++L++MY+K G +L AR
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCG-------------------------------QLKDAR 1197
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS-------LKPDKFTLAST 284
A FD++ R+VV+W SMI GY QN AL +F + L++ + + D + S
Sbjct: 1198 ALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSV 1257
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
LSAC+ + + + +H ++++ FD + VGN
Sbjct: 1258 LSACSRVSGKGITEGVHGFVVKKGFDGSIGVGN--------------------------- 1290
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
TL+D Y K G ++++FD + ++D ++W +M+ Y Q+GL+ +A+E+F MV
Sbjct: 1291 ------TLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344
Query: 405 RE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
R G + N TLSA+L + +L GK IH ++ ++ V ++I MY K G +
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A++ F+ + + SWT+M+ HG +EA+ +F +M+ G+KP++IT+V VL A
Sbjct: 1405 EMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLVE+G ++N MK+ + I+P H+ MVDL GRAG L EAYN I+ M ++PD V
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
WGSLL ACR+HKN+DLG+IAA+KL ++PDN G Y L NLY+ G+W D +R MK
Sbjct: 1524 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 1583
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
+ K GFS V+++ +VHVF V D HP + IY + K+ E++++G+VP+ SVLH
Sbjct: 1584 NRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLH 1643
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
DV+E+ KE +LR HSEKLA+AFG++++ TT+ I+KNLRVC DCH+ IK I KLV R+
Sbjct: 1644 DVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDF 1703
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
VVRD+ RFHHFK G+CSC DYW
Sbjct: 1704 VVRDSKRFHHFKDGVCSCGDYW 1725
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 197/353 (55%), Gaps = 6/353 (1%)
Query: 220 LHIHS--GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
+H++S GR+ A F Q+ TWN +I + NG +AL ++ NM+ + D
Sbjct: 66 IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG-IAAD 124
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
KFT + AC N + LGK +H +I+ F V N LI Y K G A K+ E
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
+ + NV+++TT++ G I GD+ ARRIFD + ++VV+WTAM+ GY +N ++A+
Sbjct: 185 KMRVR--NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEAL 242
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
ELF+ M E PN YT+ +++ + + L G+ IH A+++ + + ALI MY
Sbjct: 243 ELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMY 302
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
SK G+I A VF + R+ +W SMI +L HGLG+EA+ LF M + +KPD IT+
Sbjct: 303 SKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITF 361
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+GVL AC H V++G Y+ M + I P P H+ M +L R+ L EA+
Sbjct: 362 IGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 254/565 (44%), Gaps = 114/565 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G++ H + G +F+ ++L++ Y+K + A+ +FDE+P++ + SW ++++ Y +
Sbjct: 1161 GRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQ 1220
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV-TS 150
+ D N + FK+ + E+ +P V S
Sbjct: 1221 NEQAD------------------------NALLLFKDFLEEETEVEDGNNVPLDSVVMVS 1256
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C+ + + VH FVVK G G + V N+L++ YAK G +++K VFD M K+
Sbjct: 1257 VLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKD 1316
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
SW NSMIA Y+Q+G EAL +F M++
Sbjct: 1317 DISW-------------------------------NSMIAVYAQSGLSGEALEVFHGMVR 1345
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
++ + TL++ L ACA+ L+ GK IH +I+ + + VG ++I Y K G VE
Sbjct: 1346 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 1405
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+A+K FD +++++V +WTAM+ GY +
Sbjct: 1406 MAKK---------------------------------TFDRMKEKNVKSWTAMVAGYGMH 1432
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G K+A+++F MVR G KPN T ++L+ S ++ G +A + +
Sbjct: 1433 GRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH 1492
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQ-LFERM 505
++ ++ +AG +N A + + + + V W S++ A H LGE A Q LFE
Sbjct: 1493 YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE-- 1550
Query: 506 LELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
+ PD+ Y +L+ G +R +MKN +KP P S+V+L GR
Sbjct: 1551 ----LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKP-PGF--SLVELKGRVH 1603
Query: 565 LL----------QEAYNFIENMPLE 579
+ + Y ++E + LE
Sbjct: 1604 VFLVGDKEHPHHEMIYKYLEKLTLE 1628
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 166/347 (47%), Gaps = 34/347 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ Y+ GR+ A +F + N + +W II G + A+ ++ MV +
Sbjct: 65 LIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAAD 124
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+FT V+ +CT + GK VH ++K G SG V V N+L++ Y K G A VF+
Sbjct: 125 KFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFE 184
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
MR++NV SW V+S I G L AR FD++ ++VV+W +MI GY +N EAL +
Sbjct: 185 KMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALEL 244
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + ++ P+++T+ S + AC + L LG+ IH Y I+ + +G ALI Y+
Sbjct: 245 FKRM-QAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G ++ A +F+++ + + W +M+
Sbjct: 304 KCGSIK---------------------------------DAIEVFETMPRKSLPTWNSMI 330
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+GL ++A+ LF M R KP+ T +L + ++ G
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 39/314 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK+VH +IK G VF++N+L++FY K +A KVF++M V+ + SW T++S
Sbjct: 143 LGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLI 202
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G L A +F+ +P+++ VSWT +I Y + + A+ +F M + + P ++T+ S
Sbjct: 203 SCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVS 262
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +CT +G L+ G+ +H + +K + V + +L++MY+K G A VF+ M K+
Sbjct: 263 LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS 322
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ +W NSMI +G EAL +F+ M +
Sbjct: 323 LPTW-------------------------------NSMITSLGVHGLGQEALNLFSEMER 351
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-TEFDATGPVG---NALISCYAKV 326
++KPD T L AC +++ +K G AY R T+ P+ + YA+
Sbjct: 352 -VNVKPDAITFIGVLCACVHIKNVKEG---CAYFTRMTQHYGIAPIPEHYECMTELYARS 407
Query: 327 GGVEIAQKIVEQSG 340
++ A K ++ G
Sbjct: 408 NNLDEAFKSTKEVG 421
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 181/379 (47%), Gaps = 50/379 (13%)
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+LA + + + +V +WNS+IA ++ G EAL F++ L+ L P + + T+ +
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSS-LRKLGLIPTRSSFPCTIKS 1151
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C+ L L G+ H F+ V +ALI Y+K G ++ A+ + ++ I NV+
Sbjct: 1152 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDE--IPLRNVV 1209
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++T+++ GY+ QN +A+ LF+ + E
Sbjct: 1210 SWTSMITGYV-------------------------------QNEQADNALLLFKDFLEEE 1238
Query: 408 PK---PNNYTLSAMLSVSS-SLASLDHGKQI----HASALRSGEASSLSVSNALITMYSK 459
+ NN L +++ VS S S GK I H ++ G S+ V N L+ Y+K
Sbjct: 1239 TEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAK 1298
Query: 460 AGNINAARRVFNLIHWRQET--VSWTSMIVALAQHGLGEEAIQLFERMLE-LGIKPDHIT 516
G +++VF+ W +E +SW SMI AQ GL EA+++F M+ +G++ + +T
Sbjct: 1299 CGQPLVSKKVFD---WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVT 1355
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
VL AC H G + G+ ++ + + ++ S++D+ + G ++ A + M
Sbjct: 1356 LSAVLLACAHAGALRAGKCIHDQVIKM-DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 1414
Query: 577 PLEPDVVAWGSLLSACRVH 595
E +V +W ++++ +H
Sbjct: 1415 K-EKNVKSWTAMVAGYGMH 1432
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 70/342 (20%)
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C N + L+ QIHA IIR+ + LI Y+ G
Sbjct: 34 LQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGR---------------- 74
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
IA+ LL F +++ W ++ NGL++ A+ L+++MV
Sbjct: 75 --IAYAILL---------------FYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMV 117
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+G + +T ++ ++ S+D GK +H S ++ G + + V N LI Y K G+
Sbjct: 118 CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTR 177
Query: 465 AARRVF------NLIHW------------------------RQETVSWTSMIVALAQHGL 494
A +VF N++ W + VSWT+MI ++
Sbjct: 178 FALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQ 237
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHF 553
EEA++LF+RM I P+ T V ++ ACT G++ G+ ++ +KN +I
Sbjct: 238 PEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG-- 295
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+++D+ + G +++A E MP + + W S++++ VH
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH 336
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ H +QIHA +RSG ++ ++ LI +YS G I A +F I T +W +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ-NPCTFTWNLII 97
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVEQGQR 535
A +GL E+A+ L++ M+ GI D T+ V+ ACT HG L++ G
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++N +++D + G + A E M + +VV+W +++S
Sbjct: 158 GDVFVQN------------NLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGL--- 201
Query: 596 KNLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
+ G + + + I N +++A+ N Y + E+A + K M+
Sbjct: 202 --ISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/756 (36%), Positives = 424/756 (56%), Gaps = 99/756 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH +K GL L + + NSL+N Y K I
Sbjct: 340 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG------------------------- 374
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
LA VFN M RD +SW ++I + A+ +F+++++ + P +T+TS
Sbjct: 375 ------LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTS 428
Query: 151 VLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL + ++L + LS K++H +KT V+ +L++ Y++ A+ +F
Sbjct: 429 VLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF------ 482
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
R FD +V WN+M++GY+Q+ + L +FA M
Sbjct: 483 --------------------GRNNFD------LVAWNAMMSGYTQSHDGHKTLELFALMH 516
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K + D FTLA+ L C L + GKQ+HAY I++ +D
Sbjct: 517 KQGE-RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYD------------------- 556
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
L++ + +LD Y+K GD+ A+ FDS+ D VAWT ++ G +
Sbjct: 557 --------------LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIE 602
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG + A+ +F M G P+ +T++ + SS L +L+ G+QIHA+AL+ S V
Sbjct: 603 NGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFV 662
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+L+ MY+K G+I+ A +F I T +W +M+V LAQHG G+EA+QLF++M LG
Sbjct: 663 GTSLVDMYAKCGSIDDAYCLFKRIEMMNIT-AWNAMLVGLAQHGEGKEALQLFKQMESLG 721
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
IKPD +T++GVL+AC+H GLV + +Y M + IKP H++ + D LGRAGL++EA
Sbjct: 722 IKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEA 781
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
N I++M +E + +LL+ACRV + + GK A KLL +EP +S AY L N+Y++
Sbjct: 782 ENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 841
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KW++ R MK VKK GFSW++++NK+H+F V+D +PQ + IY K+ + +I
Sbjct: 842 SKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDI 901
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K+ G+VP+T L DVEE+ KE+ L +HSEKLA+AFGL+STP +T +R++KNLRVC DCH
Sbjct: 902 KQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCH 961
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+A+K+I K+ DREIV+RDA RFH FK G+CSC DYW
Sbjct: 962 NAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/601 (27%), Positives = 279/601 (46%), Gaps = 112/601 (18%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG-- 93
H K GL F+ +L+N Y K + + +F+EMP + + WN +L AY + G
Sbjct: 175 HGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFK 234
Query: 94 --RLDL--ACEVFNLMPNR------------DS--------------------VSWTTII 117
+DL A L PN DS +S I+
Sbjct: 235 EEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKIL 294
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
Y G++ ++ F++MV+ + Q T VLA+ L L+ G++VH +K GL
Sbjct: 295 SGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLD 354
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+ V+NSL+NMY K+ +A+ VF+ M +++ SW
Sbjct: 355 LMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISW----------------------- 391
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL-EKLKL 296
NS+IAG +Q+ + EA+ +F +L+ LKPD +T+ S L A ++L E L L
Sbjct: 392 --------NSVIAGIAQSDLEVEAVCLFMQLLR-CGLKPDHYTMTSVLKAASSLPEGLSL 442
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
KQIH + I+T A V ALI Y++ +
Sbjct: 443 SKQIHVHAIKTNNVADSFVSTALIDAYSR----------------------------NRC 474
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+K ++ R F D+VAW AM+ GY Q+ +ELF M ++G + +++TL+
Sbjct: 475 MKEAEVLFGRNNF------DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLA 528
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L L +++ GKQ+HA A++SG L VS+ ++ MY K G+++AA+ F+ I
Sbjct: 529 TVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV- 587
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ V+WT++I ++G E A+ +F +M +G+ PD T + A + +EQG++
Sbjct: 588 PDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 647
Query: 537 YNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+ N K+ T F S+VD+ + G + +AY + + + ++ AW ++L
Sbjct: 648 H---ANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQ 703
Query: 595 H 595
H
Sbjct: 704 H 704
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 158/614 (25%), Positives = 285/614 (46%), Gaps = 105/614 (17%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
L+ + + + +GK HARI+ + FL N+L++ Y+K S++YA++VFD+MP +
Sbjct: 52 FLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERD 111
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
L SWN+IL+AYA+ + K A +F + Q
Sbjct: 112 LVSWNSILAAYAQSSE--------------------------GVVENVKEAFLLFRILRQ 145
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
D V ++ T++ +L C G + A + H + K GL G V +L+N+Y K G
Sbjct: 146 DVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKE 205
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSG----RLDLARA---------------------- 232
+ +F+ M ++V WN+++ ++ G +DL+ A
Sbjct: 206 GRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGD 265
Query: 233 --------QF----DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
F D ++++ N +++GY G L F +M+ +S L+ D+ T
Sbjct: 266 DSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMV-ESDLECDQVT 324
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L+ L+ L LG+Q+H ++ D V N+LI+ Y
Sbjct: 325 FILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC---------------- 368
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
K+ IG AR +F+++ +RD+++W +++ G Q+ L +AV LF
Sbjct: 369 -----------------KLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLF 411
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLAS-LDHGKQIHASALRSGEASSLSVSNALITMYSK 459
++R G KP++YT++++L +SSL L KQIH A+++ + VS ALI YS+
Sbjct: 412 MQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSR 471
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+ A +F ++ + V+W +M+ Q G + ++LF M + G + D T
Sbjct: 472 NRCMKEAEVLFGRNNF--DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLAT 529
Query: 520 VLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
VL C + QG++ + +K+ + + S + ++D+ + G + A +++P+
Sbjct: 530 VLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV 587
Query: 579 EPDVVAWGSLLSAC 592
PD VAW +L+S C
Sbjct: 588 -PDDVAWTTLISGC 600
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 214/487 (43%), Gaps = 82/487 (16%)
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
DL GK H+ ++ + + N+L++MY+K G A+ VFD M +++ SWN +++
Sbjct: 61 DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA 120
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
A AQ + + +V EA +F +L+ + +
Sbjct: 121 ----------AYAQSSEGVVENVK----------------EAFLLF-RILRQDVVYTSRM 153
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
TL+ L C + + + H Y + D V AL++ Y K G V+ + + E+
Sbjct: 154 TLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEE- 212
Query: 340 GISYLNVIAFTTLLDGYIKIG------DIGPA----------------RRI--------- 368
+ Y +V+ + +L Y+++G D+ A RI
Sbjct: 213 -MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQ 271
Query: 369 ---FDSLRD----RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
F++ D ++++ +L GY G ++ F MV + + T +L+
Sbjct: 272 VKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLAT 331
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L SL G+Q+H AL+ G L+VSN+LI MY K I AR VFN + R + +S
Sbjct: 332 AVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSER-DLIS 390
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W S+I +AQ L EA+ LF ++L G+KPDH T VL A + + +G +
Sbjct: 391 WNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS---LPEGLSLSKQI- 446
Query: 542 NVHKIKP--TPSHFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV--- 594
+VH IK F S ++D R ++EA D+VAW +++S
Sbjct: 447 HVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF--DLVAWNAMMSGYTQSHD 504
Query: 595 -HKNLDL 600
HK L+L
Sbjct: 505 GHKTLEL 511
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 291/822 (35%), Positives = 432/822 (52%), Gaps = 131/822 (15%)
Query: 31 VGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+GK +H I+CG V + SL++ Y K S+ +KVF+ M
Sbjct: 121 LGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM--------------- 165
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
P R+ V+WT+++ Y + G + + +F M + V P T
Sbjct: 166 ----------------PKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFA 209
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL+ + G + G++VH+ VK G V V NSL+NMYAK G A+ VF GM
Sbjct: 210 SVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGME-- 267
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
RD+V+WN+++AG NG+D EAL +F +
Sbjct: 268 -----------------------------TRDMVSWNTLMAGLVLNGHDLEALQLFHDS- 297
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA--------------TGPV 315
+ S + T A+ + CAN+++L L +Q+H+ +++ F + G +
Sbjct: 298 RSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQL 357
Query: 316 GNAL------------ISCYAKVGG------VEIAQKI--------VEQSGISYLNV--- 346
GNAL +S A + G V +A + V + +Y +
Sbjct: 358 GNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Query: 347 ----------------------IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
I T LL Y K+ + A IF + +DVV+W+AML
Sbjct: 418 SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAML 477
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRSGE 443
Y Q G + A +F M G KPN +T+S+++ + +S A +D G+Q HA +++
Sbjct: 478 TCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRC 537
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+L VS+AL++MY++ G+I +A+ +F ++ VSW SM+ AQHG ++A+ +F
Sbjct: 538 HDALCVSSALVSMYARKGSIESAQCIFER-QTDRDLVSWNSMLSGYAQHGYSQKALDVFR 596
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M GI+ D +T++ V+ C H GLVE+GQRY++ M + I PT H+A MVDL RA
Sbjct: 597 QMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRA 656
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L EA + IE M + W +LL AC+VHKN++LGK+AAEKLL +EP +S Y L
Sbjct: 657 GKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLS 716
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+YS+ GKW++ +RK M VKK G SW+QI+NKVH F D HP + IY K+
Sbjct: 717 NIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLR 776
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ ++K+ G+ PDT+ LH+V E+ KE ML HSE+LA+AFGLI+TP L I KNLR
Sbjct: 777 AMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLR 836
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCH+ IK + K+ DREIV+RD +RFHHF G+CSC D+W
Sbjct: 837 VCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 218/507 (42%), Gaps = 106/507 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA +++ + + + +H+ ++K G H SY +
Sbjct: 309 YATVIKLCANIKQLGLARQLHSSVLKRGFH-------------------SYGNVM----- 344
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMP-NRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
++ AY+K G+L A ++F LM +++ VSWT +I + G A +F
Sbjct: 345 -------TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFS 397
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M +D V P FT +++L + A S ++H+ V+KT V +LL Y+K+
Sbjct: 398 RMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKTNYECTSIVGTALLASYSKLC 453
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ A ++F + K+V SW ++M+ Y+Q
Sbjct: 454 NTEEALSIFKMIDQKDVVSW-------------------------------SAMLTCYAQ 482
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN-LEKLKLGKQIHAYIIRTEFDATG 313
G A +F M LKP++FT++S + ACA+ + LG+Q HA I+
Sbjct: 483 AGDSDGATNIFIKMTMH-GLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDAL 541
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V +AL+S YA+ G +E AQ I F+
Sbjct: 542 CVSSALVSMYARKGSIESAQCI---------------------------------FERQT 568
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
DRD+V+W +ML GY Q+G ++ A+++FR M EG + + T +++ + ++ G++
Sbjct: 569 DRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQR 628
Query: 434 IHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
S R G ++ ++ +YS+AG ++ A + + + + W +++ A H
Sbjct: 629 YFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVH 688
Query: 493 GLGEEAIQLFERMLELGIKP-DHITYV 518
E E++L L +P D TYV
Sbjct: 689 KNVELGKLAAEKLLSL--EPFDSATYV 713
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 168/376 (44%), Gaps = 62/376 (16%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD++ R+ T + + +++ G +AL F ++ + + L L C
Sbjct: 57 ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 290 NLEKLKLGKQIHAYIIRTEFD-ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
++ LGKQ+H IR D VG +L+ Y K V +K+ E + NV+
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFE--AMPKRNVVT 172
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
+T+LL GYI Q+G D +ELF M EG
Sbjct: 173 WTSLLTGYI-------------------------------QDGALSDVMELFFRMRAEGV 201
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN+ T +++LSV +S +D G+++HA +++ G S++ V N+L+ MY+K G + AR
Sbjct: 202 WPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARV 261
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT--- 525
VF + R + VSW +++ L +G EA+QLF TY V+ C
Sbjct: 262 VFCGMETR-DMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIK 320
Query: 526 --------HGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
H ++++G Y N+M +++D +AG L A + M
Sbjct: 321 QLGLARQLHSSVLKRGFHSYGNVM-------------TALMDAYSKAGQLGNALDIFLLM 367
Query: 577 PLEPDVVAWGSLLSAC 592
+VV+W ++++ C
Sbjct: 368 SGSQNVVSWTAMINGC 383
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/756 (36%), Positives = 421/756 (55%), Gaps = 98/756 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH +K GL V + NSL+N Y+K +A+
Sbjct: 922 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAR---------------------- 959
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
EVFN M + D +SW ++I + + + ++ +F++++ + + P FT+ S
Sbjct: 960 ---------EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 1010
Query: 151 VLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL +C++L D L+ +++H +KTG V +L+++Y+K
Sbjct: 1011 VLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSK----------------- 1053
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
SG+++ A F + D+ WN+M+ GY +AL +F+ ++
Sbjct: 1054 --------------SGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFS-LI 1098
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
S K D+ TLA+ AC L L GKQIHA+ I+ FD+ V
Sbjct: 1099 HKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHV-------------- 1144
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
SGI LD YIK GD+ A +F+ + D VAWT+M+ G
Sbjct: 1145 --------NSGI-----------LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVD 1185
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG A+ ++ M + P+ YT + ++ SS + +L+ G+Q+HA+ ++ S V
Sbjct: 1186 NGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFV 1245
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+L+ MY+K GNI A R+F ++ R + W +M+V LAQHG EEA+ LF+ M G
Sbjct: 1246 GTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL-WNAMLVGLAQHGNAEEAVNLFKSMKSHG 1304
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I+PD ++++G+L+AC+H GL + Y + M N + I+P H++ +VD LGRAGL+QEA
Sbjct: 1305 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEA 1364
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
IE MP + +LL ACR+ +++ GK A +L +EP +S AY L N+Y++
Sbjct: 1365 DKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAA 1424
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
+W+D + RK MK VKK GFSW+ ++N +H+F V+D HPQ D IY+K+ ++ I
Sbjct: 1425 NRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTI 1484
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+E G+VPDT VL DVE++ KE+ L +HSEKLAIA+GLISTP +TT+R++KNLRVC DCH
Sbjct: 1485 REDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCH 1544
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+AIK+I K+ +REIV+RDA RFHHF+ G+CSC DYW
Sbjct: 1545 NAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 171/634 (26%), Positives = 288/634 (45%), Gaps = 123/634 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL++ + + N +GK HARI+ G FL N+L+ Y+K S+S A++VFD P +
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
L +WN IL AYA V N+ G + + +F +
Sbjct: 687 LVTWNAILGAYAAS-------------------------VDSND-GNAQEGLHLFRLLRA 720
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
T+ T+ VL C G L A + VH + +K GL V V+ +L+N+Y+K G
Sbjct: 721 SLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRD 780
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSG-------------RLDLARAQFD-QMI------ 238
A+ +FD MR ++V WN+++ ++ G R L +F Q+I
Sbjct: 781 ARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSE 840
Query: 239 -------------------------ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
DV WN ++ G ++ A+ F NM +
Sbjct: 841 VNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNM-NGLN 899
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+ D TL L+A A + L+LGKQ+H +++ D+ V N+L++ Y+K+
Sbjct: 900 IDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM------- 952
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
G +Y AR +F+ ++ D+++W +M+ Q+ L
Sbjct: 953 ------GCAYF--------------------AREVFNDMKHLDLISWNSMISSCAQSSLE 986
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSL-ASLDHGKQIHASALRSGEASSLSVSNA 452
+++V LF ++ EG KP+++TL+++L SSL L+ +QIH AL++G + V+
Sbjct: 987 EESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI +YSK+G + A +F + W +M+ G++A++LF + + G K
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKD-DLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKS 1105
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP---TPSHFAS-MVDLLGRAGLLQE 568
D IT AC L++QG++ + H IK + H S ++D+ + G +
Sbjct: 1106 DQITLATAAKACGCLVLLDQGKQIH-----AHAIKAGFDSDLHVNSGILDMYIKCGDMVN 1160
Query: 569 A---YNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
A +N+I PD VAW S++S C + N D
Sbjct: 1161 AGIVFNYIS----APDDVAWTSMISGCVDNGNED 1190
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 270/770 (35%), Positives = 406/770 (52%), Gaps = 97/770 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ HLL + S GK++H I++ G+ + L N+LMN Y + S+ A+ V
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV----- 488
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
F RD +SW ++I + + G ++ A ++F E
Sbjct: 489 --------------------------FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQE 522
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M +++ P T SVL+ C L GK++H + ++GL VN+ N+L+NMY
Sbjct: 523 MQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMY----- 577
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
I G L AR F + RDV++W +MI G +
Sbjct: 578 --------------------------IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQ 611
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D +A+ +F M ++ +P K T +S L C + L GK++ AYI+ + ++ V
Sbjct: 612 GEDMKAIELFWQM-QNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGV 670
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNALIS Y+K G ++ D AR +FD + R
Sbjct: 671 GNALISAYSKSG-----------------------SMTD----------AREVFDKMPSR 697
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V+W ++ GY QNGL + AVE M + PN ++ ++L+ SS ++L+ GK++H
Sbjct: 698 DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVH 757
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A ++ + V ALI+MY+K G+ A+ VF+ I + V+W +MI A AQHGL
Sbjct: 758 AEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQHGLA 816
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A+ F M + GIKPD T+ +L+AC H GLV +G + ++ M++ + + PT H+
Sbjct: 817 SKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGC 876
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+V LLGRA QEA I MP PD W +LL ACR+H N+ L + AA L + N
Sbjct: 877 LVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARN 936
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
Y L N+Y++ G+W+D A IR+ M+ G++K G SW+++ N +H F D HP+
Sbjct: 937 PAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPET 996
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY ++ ++ E++E G+ PDT VLHD+ + +E L HSE+LAIA+GLI TP T
Sbjct: 997 AEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTP 1056
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLR+C DCH+A KFI KLV REI+ RD+ RFH FK G CSC DYW
Sbjct: 1057 IRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/546 (32%), Positives = 274/546 (50%), Gaps = 72/546 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++S YA+ G L A E+F MP RD +SW II Y A+R++ +M + V
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + T +L++C + GK +H ++++G+ ++ N+L+NMY + G M A+ V
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+G + RDV++WNSMIAG++Q+G A
Sbjct: 489 FEGTQ-------------------------------ARDVISWNSMIAGHAQHGSYETAY 517
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ L+PD T AS LS C N E L+LGKQIH I + +GNALI+
Sbjct: 518 KLFQEM-QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM 576
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y I+ G + AR +F SL+ RDV++WTA
Sbjct: 577 Y---------------------------------IRCGSLQDARNVFHSLQHRDVMSWTA 603
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G G + A+ELF M EG +P T S++L V +S A LD GK++ A L SG
Sbjct: 604 MIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSG 663
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
V NALI+ YSK+G++ AR VF+ + R + VSW +I AQ+GLG+ A++
Sbjct: 664 YELDTGVGNALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAGYAQNGLGQTAVEFA 722
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M E + P+ ++V +L AC+ +E+G+R + + K++ A+++ + +
Sbjct: 723 YQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVK-RKLQGDVRVGAALISMYAK 781
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH--KNLDLGKIAAEKLLLIEPDNSGAYS 620
G EA +N+ +E +VV W ++++A H + LG + I+PD S S
Sbjct: 782 CGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTS 840
Query: 621 AL--CN 624
L CN
Sbjct: 841 ILSACN 846
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 183/687 (26%), Positives = 302/687 (43%), Gaps = 147/687 (21%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
T P + Y LLQ+ + R K +HA++++ + +FL N L+N Y K
Sbjct: 17 THQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCR 76
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
S+ A +VF EM P RD +SW ++I Y +
Sbjct: 77 SVLDAHQVFKEM-------------------------------PRRDVISWNSLISCYAQ 105
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G K A ++F EM +P + T S+L +C + +L GKK+HS ++K G V
Sbjct: 106 QGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRV 165
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
NSLL+MY K GD A+ VF G+ ++V S+N ++ L
Sbjct: 166 QNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL---------------------- 203
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
Y+Q Y E LG+F M + PDK T + L A L GK+IH
Sbjct: 204 ---------YAQKAYVKECLGLFGQM-SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 303 YIIRTEFDATGPVGNALIS-CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+ ++ VG AL++ C ++ GD
Sbjct: 254 LTVEEGLNSDIRVGTALVTMC----------------------------------VRCGD 279
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A++ F DRDVV + A++ Q+G N +A E + M +G N T ++L+
Sbjct: 280 VDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNA 339
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S+ +L+ GK IH+ G +S + + NALI+MY++ G++ AR +F + R + +S
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR-DLIS 398
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMM 540
W ++I A+ EA++L+++M G+KP +T++ +L+AC + G+ + +++
Sbjct: 399 WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 541 KNVHKIKPTPSHFA-SMVDLLGRAGLLQEAYNFIE------------------------- 574
++ K + H A +++++ R G L EA N E
Sbjct: 459 RSGIK---SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 575 ---------NMPLEPDVVAWGSLLSACRVHKNLDLGK-----IAAEKLLLIEPDNSGAYS 620
N LEPD + + S+LS C+ + L+LGK I L L + +
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL----DVNLGN 571
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGV 647
AL N+Y CG +DA N+ S+++ V
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDV 598
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 155/611 (25%), Positives = 263/611 (43%), Gaps = 138/611 (22%)
Query: 140 QVLPTQF---TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
Q PT+ T ++L +CT L K++H+ +V+ + + ++N L+NMY K
Sbjct: 19 QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
+ A VF M ++V SW NS+I+ Y+Q G
Sbjct: 79 LDAHQVFKEMPRRDVISW-------------------------------NSLISCYAQQG 107
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+ +A +F M +++ P+K T S L+AC + +L+ GK+IH+ II+ + V
Sbjct: 108 FKKKAFQLFEEM-QNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N+L+S Y K G + A+++ +GIS RD
Sbjct: 167 NSLLSMYGKCGDLPRARQVF--AGIS-------------------------------PRD 193
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV++ ML Y Q K+ + LF M EG P+ T +L ++ + LD GK+IH
Sbjct: 194 VVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+ G S + V AL+TM + G++++A++ F R + V + ++I ALAQHG
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR-DVVVYNALIAALAQHGHNV 312
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-- 554
EA + + RM G+ + TY+ +L AC+ +E G K +H H +
Sbjct: 313 EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG-------KLIHSHISEDGHSSDV 365
Query: 555 ----SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS----------ACRVHKNLDL 600
+++ + R G L +A MP + D+++W ++++ A R++K +
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQS 424
Query: 601 GKIAAEKL----LLIEPDNSGAYS----------------------ALCNLYSSCGKWED 634
+ ++ LL NS AY+ AL N+Y CG +
Sbjct: 425 EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLME 484
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A N+ + G + SW + + G H Q + Y K++ E++
Sbjct: 485 AQNV-----FEGTQARDVISWNSM-----IAG-----HAQHGS-YETAYKLFQEMQNEEL 528
Query: 695 VPDT---ASVL 702
PD ASVL
Sbjct: 529 EPDNITFASVL 539
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/770 (34%), Positives = 411/770 (53%), Gaps = 97/770 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ HLL + S GK++H I++ G+ + L N+LMN Y + SI A+ VF+
Sbjct: 489 FLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTR 548
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
RD +SW ++I + + G ++ A ++F+E
Sbjct: 549 A-------------------------------RDIISWNSMIAGHAQHGSYEAAYKLFLE 577
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++ + P + T SVL C L G+++H ++++GL VN+ N+L+NMY
Sbjct: 578 MKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMY----- 632
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
I G L A F + R+V++W +MI G++
Sbjct: 633 --------------------------IRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQ 666
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D +A +F M D KP K T +S L AC + L GK++ A+I+ + ++ V
Sbjct: 667 GEDRKAFELFWQMQNDG-FKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGV 725
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNALIS Y+K G ++ D AR++FD + +R
Sbjct: 726 GNALISAYSKSG-----------------------SMTD----------ARKVFDKMPNR 752
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+++W M+ GY QNGL A++ M +G N ++ ++L+ SS ++L+ GK++H
Sbjct: 753 DIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVH 812
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A ++ + V ALI+MY+K G++ A+ VF+ + V+W +MI A AQHGL
Sbjct: 813 AEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFT-EKNVVTWNAMINAYAQHGLA 871
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A+ F M + GIKPD T+ +L+AC H GLV +G R ++ +++ H + PT H+
Sbjct: 872 SKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGC 931
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+V LLGRAG QEA I MP PD W +LL ACR+H N+ L + AA L + N
Sbjct: 932 LVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARN 991
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
Y L N+Y++ G+W+D A IR+ M+ G++K G SW+++ N +H F D HP+
Sbjct: 992 PAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPET 1051
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY ++ ++ E++ G+ PDT VLH+++++ +E L HSE+LAIA+GL+ TP T
Sbjct: 1052 AEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTP 1111
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLR+C DCH+A KFI KLV REI+ RD+ RFH FK G CSC D+W
Sbjct: 1112 IRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 277/548 (50%), Gaps = 76/548 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S YA+ G L A E+FN MP RD +SW II Y A++++ +M + V
Sbjct: 424 NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + T +L++CT S GK +H ++++G+ ++ N+L+NMY + G M A+ V
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNV 543
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+G R RD+++WNSMIAG++Q+G A
Sbjct: 544 FEGTR-------------------------------ARDIISWNSMIAGHAQHGSYEAAY 572
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M K+ L+PDK T AS L C N E L+LG+QIH II + +GNALI+
Sbjct: 573 KLFLEMKKEG-LEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINM 631
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y I+ G + A +F SLR R+V++WTA
Sbjct: 632 Y---------------------------------IRCGSLQDAYEVFHSLRHRNVMSWTA 658
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G+ G ++ A ELF M +G KP T S++L S A LD GK++ A L SG
Sbjct: 659 MIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG 718
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
V NALI+ YSK+G++ AR+VF+ + R + +SW MI AQ+GLG A+Q
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIAGYAQNGLGGTALQFA 777
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M E G+ + ++V +L AC+ +E+G+R + + K++ A+++ + +
Sbjct: 778 YQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK-RKMQGDVRVGAALISMYAK 836
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDLGKIAAEKLLLIEPDNSGA 618
G L+EA +N E +VV W ++++A H K LD ++ I+PD S
Sbjct: 837 CGSLEEAQEVFDNFT-EKNVVTWNAMINAYAQHGLASKALDFFNCMDKE--GIKPDGSTF 893
Query: 619 YSAL--CN 624
S L CN
Sbjct: 894 TSILSACN 901
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 174/670 (25%), Positives = 297/670 (44%), Gaps = 139/670 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L+Q+ + R+ K +HA++++ G+ +FL N L+N Y K S+S A +VF +M
Sbjct: 85 YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKM- 143
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
P RD +SW ++I Y + G K A ++F E
Sbjct: 144 ------------------------------PRRDVISWNSLISCYAQQGFKKKAFQLFEE 173
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M +P++ T S+L +C + +L GKK+HS +++ G V NSLLNMY K D
Sbjct: 174 MQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCED 233
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF G+ ++V S+N ++ L Y+Q
Sbjct: 234 LPSARQVFSGIYRRDVVSYNTMLGL-------------------------------YAQK 262
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
Y E +G+F M + PDK T + L A L GK+IH + ++ V
Sbjct: 263 AYVEECIGLFGQM-SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRV 321
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G AL + + ++ GD+ A++ ++ DR
Sbjct: 322 GTALATMF---------------------------------VRCGDVAGAKQALEAFADR 348
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVV + A++ Q+G ++A E + M +G N T ++L+ S+ +L G+ IH
Sbjct: 349 DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIH 408
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ G +S + + N+LI+MY++ G++ AR +FN + R + +SW ++I A+
Sbjct: 409 SHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR-DLISWNAIIAGYARREDR 467
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY------------------ 537
EA++L+++M G+KP +T++ +L+ACT+ G+ +
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527
Query: 538 -NMMKNVHKIKPTPSHFA-----------SMVDLLGRAGLLQEAYNFIENMP---LEPDV 582
NM + I + F SM+ + G + AY M LEPD
Sbjct: 528 MNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-----NSGAYSALCNLYSSCGKWEDAAN 637
+ + S+L C+ + L+LG+ +L+IE N G +AL N+Y CG +DA
Sbjct: 588 ITFASVLVGCKNPEALELGRQI--HMLIIESGLQLDVNLG--NALINMYIRCGSLQDAYE 643
Query: 638 IRKSMKYVGV 647
+ S+++ V
Sbjct: 644 VFHSLRHRNV 653
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/646 (25%), Positives = 280/646 (43%), Gaps = 133/646 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H++II+ G ++NSL+N Y K E + A++VF + + + S+NT+L YA+
Sbjct: 202 GKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ ++ I +F +M + + P + T ++
Sbjct: 262 KAYVE-------------------------------ECIGLFGQMSSEGIPPDKVTYINL 290
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + T L GK++H V GL+ + V +L M+ + GD AK + ++V
Sbjct: 291 LDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDV 350
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+N ++IA +Q+G+ EA + M D
Sbjct: 351 VVYN-------------------------------ALIAALAQHGHYEEAFEQYYQMRSD 379
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ ++ T S L+AC+ + L G+ IH++I + +GN+LIS YA+ G
Sbjct: 380 GVVM-NRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCG---- 434
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D+ AR +F+++ RD+++W A++ GY +
Sbjct: 435 -----------------------------DLPRARELFNTMPKRDLISWNAIIAGYARRE 465
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+A++L++ M EG KP T +LS ++ ++ GK IH LRSG S+ ++N
Sbjct: 466 DRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLAN 525
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ MY + G+I A+ VF R + +SW SMI AQHG E A +LF M + G++
Sbjct: 526 ALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLE 584
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD IT+ VL C + +E G R +M+ ++ + +++++ R G LQ+AY
Sbjct: 585 PDKITFASVLVGCKNPEALELG-RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYE 643
Query: 572 F----------------------------------IENMPLEPDVVAWGSLLSACRVHKN 597
++N +P + S+L AC
Sbjct: 644 VFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSAC 703
Query: 598 LDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCGKWEDAANIRKSM 642
LD GK +L + ++G +AL + YS G DA + M
Sbjct: 704 LDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKM 749
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 154/606 (25%), Positives = 260/606 (42%), Gaps = 128/606 (21%)
Query: 140 QVLPTQFTVTS---VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
Q PT+ + ++ +CT L+ K++H+ +V+ G+ + ++N L+NMY K
Sbjct: 74 QPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 133
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A VF M ++V SW NS+I+ Y+Q G
Sbjct: 134 SDAHQVFLKMPRRDVISW-------------------------------NSLISCYAQQG 162
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+ +A +F M + + P K T S L+AC + +L+ GK+IH+ II + V
Sbjct: 163 FKKKAFQLFEEM-QTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQ 221
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N+L++ Y K + A+++ SGI RR D
Sbjct: 222 NSLLNMYGKCEDLPSARQVF--SGIY-----------------------RR--------D 248
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV++ ML Y Q ++ + LF M EG P+ T +L ++ + LD GK+IH
Sbjct: 249 VVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK 308
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+ G S + V AL TM+ + G++ A++ R + V + ++I ALAQHG E
Sbjct: 309 LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR-DVVVYNALIAALAQHGHYE 367
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV-HKIKPTPSHFAS 555
EA + + +M G+ + TY+ VL AC+ + G+ ++ + V H + S
Sbjct: 368 EAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGN--S 425
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS----------ACRVHKNLDLGKIAA 605
++ + R G L A MP + D+++W ++++ A +++K + +
Sbjct: 426 LISMYARCGDLPRARELFNTMP-KRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKP 484
Query: 606 EKL----LLIEPDNSGAYS----------------------ALCNLYSSCGKWEDAANIR 639
++ LL NS AYS AL N+Y CG +A N+
Sbjct: 485 GRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNV- 543
Query: 640 KSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDT- 698
+ G + SW + + G H Q + Y K++ E+K+ G PD
Sbjct: 544 ----FEGTRARDIISWNSM-----IAG-----HAQHGS-YEAAYKLFLEMKKEGLEPDKI 588
Query: 699 --ASVL 702
ASVL
Sbjct: 589 TFASVL 594
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/705 (37%), Positives = 402/705 (57%), Gaps = 66/705 (9%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
S N ++ YAK G L+ A VF+ + D VSW II A+ + EM +
Sbjct: 148 SANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSG 207
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+ P FT++S L +C + G+++HS ++K + + L++MY+K
Sbjct: 208 MCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNS----- 262
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+D AR F M ERD++ WN++I+G+SQN D E
Sbjct: 263 --------------------------MDDARLVFKLMPERDMIAWNAVISGHSQNEEDEE 296
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A +F ++ + ++ TL++ L + A L+ + +QIHA +++ F+ V N+LI
Sbjct: 297 AASLFP-LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLI 355
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
D Y K G + A R+F+ D+V +
Sbjct: 356 ---------------------------------DTYGKCGHVEDATRVFEESPIVDLVLF 382
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
T+++ Y Q+G ++A+ L+ M G KP+++ S++L+ +SL++ + GKQ+H L+
Sbjct: 383 TSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK 442
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G S + N+L+ MY+K G+I A F+ I R VSW++MI LAQHG G+EA+Q
Sbjct: 443 FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG-IVSWSAMIGGLAQHGYGKEALQ 501
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF++ML++G+ P+HIT V VL AC H GLV + + Y+N MK + I+P H+A M+DLL
Sbjct: 502 LFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLL 561
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L+ A + MP + + + WG+LL A R+HKN+DLG+ AAE LL +EP+ SG +
Sbjct: 562 GRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHV 621
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L N+Y+S G W+ A +R+ MK VKK G SW+++++KV+ F V D H + IY
Sbjct: 622 LLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYA 681
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
K+ ++ D +K+ G+VP LHDVE KEQ+L HHSEKLA+AFGLI+TP +R+ K
Sbjct: 682 KLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKK 741
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLR+C DCH+ +KFI K+V REI+VRD RFHHF++G CSC +YW
Sbjct: 742 NLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/582 (27%), Positives = 269/582 (46%), Gaps = 103/582 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L++ +++ +GK VH ++ G F+ NSL+ YAK A+ +FD +P
Sbjct: 13 FPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIP 72
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+++ SWN + S Y D+ E A+ +F +
Sbjct: 73 DRSVVSWNALFSCYVHS---DMHGE----------------------------AVSLFHD 101
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
MV + P +F+++S++ CT L D G+K+H +++K G N+L++MYAKVG
Sbjct: 102 MVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGI 161
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +VFD + ++ SWN + IAG +
Sbjct: 162 LEDASSVFDEIAKPDIVSWNAI-------------------------------IAGCVLH 190
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
Y AL + M K S + P+ FTL+S L ACA + +LG+Q+H+ +I+ + + +
Sbjct: 191 EYHHRALELLREMNK-SGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFL 249
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G LI Y+K ++ AR +F + +R
Sbjct: 250 GVGLIDMYSKCNSMD---------------------------------DARLVFKLMPER 276
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D++AW A++ G+ QN +++A LF M EG N TLS +L ++L + +QIH
Sbjct: 277 DMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIH 336
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A +L+SG V N+LI Y K G++ A RVF + V +TS++ A AQ G G
Sbjct: 337 ALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTAYAQDGQG 395
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA- 554
EEA++L+ M + GIKPD +L AC EQG++ + ++ K FA
Sbjct: 396 EEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVH---VHILKFGFMSDIFAG 452
Query: 555 -SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
S+V++ + G +++A +P+ +V+W +++ H
Sbjct: 453 NSLVNMYAKCGSIEDASCAFSRIPVR-GIVSWSAMIGGLAQH 493
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 236/534 (44%), Gaps = 116/534 (21%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+F SVL +CT DL GK+VH VV TG V NSL+ +YAK G A+++FD
Sbjct: 10 EFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFD 69
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ ++V SWN + S ++HS +G EA+ +
Sbjct: 70 AIPDRSVVSWNALFSCYVHS----------------------------DMHG---EAVSL 98
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F +M+ S ++P++F+L+S ++ C LE G++IH Y+I+ +D+ NAL+ YA
Sbjct: 99 FHDMVL-SGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYA 157
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
KVG +E A +FD + D+V+W A++
Sbjct: 158 KVGILE---------------------------------DASSVFDEIAKPDIVSWNAII 184
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G + + A+EL R M + G PN +TLS+ L + +A + G+Q+H+S ++
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S + LI MYSK +++ AR VF L+ R + ++W ++I +Q+ EEA LF
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPER-DMIAWNAVISGHSQNEEDEEAASLFPL 303
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-------SMV 557
M GI + T VL + + Q Y M + +H + S F S++
Sbjct: 304 MHTEGIGFNQTTLSTVLKS------IAALQANY-MCRQIHALS-LKSGFEFDNYVVNSLI 355
Query: 558 DLLGRAGLLQEAYNFIENMP----------------------------------LEPDVV 583
D G+ G +++A E P ++PD
Sbjct: 356 DTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSF 415
Query: 584 AWGSLLSACRVHKNLDLGK-IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
SLL+AC + GK + L + A ++L N+Y+ CG EDA+
Sbjct: 416 VCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDAS 469
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 156/320 (48%), Gaps = 40/320 (12%)
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+K ++F S L AC + L LGKQ+H ++ T FD+ V N+L+ YAK GG
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG----- 60
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
G AR +FD++ DR VV+W A+ Y + ++
Sbjct: 61 ----------------------------FGDARSLFDAIPDRSVVSWNALFSCYVHSDMH 92
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+AV LF MV G +PN ++LS+M++V + L G++IH ++ G S +NAL
Sbjct: 93 GEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANAL 152
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ MY+K G + A VF+ I + + VSW ++I H A++L M + G+ P+
Sbjct: 153 VDMYAKVGILEDASSVFDEI-AKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPN 211
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYN 571
T L AC L E G++ ++ ++ K+ F ++D+ + + +A
Sbjct: 212 MFTLSSALKACAGMALRELGRQLHS---SLIKMDMGSDSFLGVGLIDMYSKCNSMDDARL 268
Query: 572 FIENMPLEPDVVAWGSLLSA 591
+ MP E D++AW +++S
Sbjct: 269 VFKLMP-ERDMIAWNAVISG 287
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 69/269 (25%)
Query: 20 LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTL 79
LQ+N R +HA +K G ++ NSL++ Y K + A +VF+E P+ L
Sbjct: 326 LQANYMCRQ------IHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDL 379
Query: 80 CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
+ ++++AYA+ G+ + A+R+++EM
Sbjct: 380 VLFTSLVTAYAQD-------------------------------GQGEEALRLYLEMQDR 408
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
+ P F +S+L +C +L GK+VH ++K G + NSL+NMYAK G
Sbjct: 409 GIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGS---- 464
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
++ A F ++ R +V+W++MI G +Q+GY
Sbjct: 465 ---------------------------IEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGK 497
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSAC 288
EAL +F MLK + P+ TL S L AC
Sbjct: 498 EALQLFKQMLK-VGVPPNHITLVSVLCAC 525
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G K N + ++L + L GKQ+H + +G S V+N+L+ +Y+K G A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
R +F+ I R VSW ++ + EA+ LF M+ GI+P+ + ++ CT
Sbjct: 65 RSLFDAIPDRS-VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCT- 122
Query: 527 GGLVE--QGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDV 582
GL + QG++ + + K+ F+ ++VD+ + G+L++A + + + +PD+
Sbjct: 123 -GLEDSVQGRKIHGYLI---KLGYDSDAFSANALVDMYAKVGILEDASSVFDEIA-KPDI 177
Query: 583 VAWGSLLSACRVHK 596
V+W ++++ C +H+
Sbjct: 178 VSWNAIIAGCVLHE 191
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 31/134 (23%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH I+K G +F NSL+N YAK SI A F +PV+ + SW+ ++ A+
Sbjct: 433 GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQ 492
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G Y K A+++F +M++ V P T+ SV
Sbjct: 493 HG--------------------------YG-----KEALQLFKQMLKVGVPPNHITLVSV 521
Query: 152 LASCTALGDLSAGK 165
L +C G ++ K
Sbjct: 522 LCACNHAGLVAEAK 535
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/662 (37%), Positives = 403/662 (60%), Gaps = 39/662 (5%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
GR K A F + P+ F+ +L SC LG L GK+VHS ++ +G S ++
Sbjct: 45 GRIKQAYDTFTSEIWSD--PSLFS--HLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFIS 100
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N LLN Y+K+G + +F M +NV S+N++++ ++ G L+ A+ FD+M ER++
Sbjct: 101 NHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIA 160
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TWN+MIAG +Q ++ +AL +F M L PD+FTL S L CA L L G+++HA
Sbjct: 161 TWNAMIAGLTQFEFNKQALSLFKEMYGLGFL-PDEFTLGSVLRGCAGLRSLLAGQEVHAC 219
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+++ F+ + VG ++L YIK G +
Sbjct: 220 LLKCGFELSSVVG---------------------------------SSLAHMYIKSGSLS 246
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
++ S+ R VVAW ++ G QNG ++ + + M G +P+ T ++LS S
Sbjct: 247 DGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACS 306
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
LA+L G+QIHA +++G +S L+V ++LI+MYS++G + + + F + + V W+
Sbjct: 307 ELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAF-VDRENFDVVLWS 365
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI A HG GEEA++LF +M +L ++ + +T++ +L AC+H GL E+G Y+++M
Sbjct: 366 SMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKK 425
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+K+KP H+ +VDLLGRAG L+EA I +MP++PD + W +LL+AC++HK ++ +
Sbjct: 426 YKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAER 485
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
+E+++ ++P ++ +Y L N+++S W + + IRK+M+ V+K G SW++++N VH
Sbjct: 486 ISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVH 545
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAI 723
F + D HPQ I + ++ E+K+ G+VP+ SVLHD++ + KE L HHSEK AI
Sbjct: 546 QFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAI 605
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
AF L++T EN +R+MKNLRVC+DCH+AIK I ++ +REI+VRDA+RFHHFK G CSC +
Sbjct: 606 AFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGN 665
Query: 784 YW 785
YW
Sbjct: 666 YW 667
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 225/495 (45%), Gaps = 66/495 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
++HLLQS +K + F GK VH+ II G F+ N L+NFY+K + +F M
Sbjct: 64 LFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNM 123
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + S+N +++ Y + G L+ A ++F+ M R+ +W +I + K A+ +F
Sbjct: 124 PRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFK 183
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM LP +FT+ SVL C L L AG++VH+ ++K G V +SL +MY K G
Sbjct: 184 EMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSG 243
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ + M ++ V +W N++IAG +Q
Sbjct: 244 SLSDGEKLIKSMPIRTVVAW-------------------------------NTLIAGKAQ 272
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG E L + NM+K + +PDK T S LSAC+ L L G+QIHA +I+ +
Sbjct: 273 NGCPEEVLNQY-NMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLA 331
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V ++LIS Y++ G +E + K F +
Sbjct: 332 VVSSLISMYSRSGCLEDSIK---------------------------------AFVDREN 358
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
DVV W++M+ Y +G ++A+ELF M + N T ++L S + G +
Sbjct: 359 FDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEY 418
Query: 435 HASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ + + ++ + +AG + A + + + + + W +++ A H
Sbjct: 419 FDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHK 478
Query: 494 LGEEAIQLFERMLEL 508
E A ++ E +++L
Sbjct: 479 EAEMAERISEEIIKL 493
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 40/234 (17%)
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G K A + F S + P S +L L SL GKQ+H+ + SG + +
Sbjct: 44 DGRIKQAYDTFTSEIWSDPS----LFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFI 99
Query: 450 SNALITMYSK-------------------------------AGNINAARRVFNLIHWRQE 478
SN L+ YSK G++ +A+++F+ + R
Sbjct: 100 SNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERN- 158
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+W +MI L Q ++A+ LF+ M LG PD T VL C + GQ +
Sbjct: 159 IATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHA 218
Query: 539 -MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++K ++ +S+ + ++G L + I++MP+ VVAW +L++
Sbjct: 219 CLLKCGFELSSVVG--SSLAHMYIKSGSLSDGEKLIKSMPIRT-VVAWNTLIAG 269
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/641 (40%), Positives = 385/641 (60%), Gaps = 74/641 (11%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---VGDEMMAKAVFDGM 206
S+L C + + G++VH+ ++KT V + L+ +Y K +GD
Sbjct: 67 SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGD----------- 115
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
AR FD+M +R+VV+W +MI+ YSQ G+ FEAL +F
Sbjct: 116 -----------------------ARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFV 152
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML+ S +P+ FT A+ L++C + G+QIH+ I+ +++ VG
Sbjct: 153 EMLR-SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG---------- 201
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
++LLD Y K G I A +F L +RDVVA TA++ G
Sbjct: 202 -----------------------SSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISG 238
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q GL+++A++LFR + EG N+ T +++L+ S LA+L+HGKQ+H+ LRSG+ S
Sbjct: 239 YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 298
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ + N+LI MYSK GN+ ARR+F+ + R +SW +M+V ++HG+ E ++LF+ M
Sbjct: 299 VVLLNSLIDMYSKCGNVCYARRIFDSMPERT-CISWNAMLVGYSKHGMAREVLELFKLMR 357
Query: 507 ELG-IKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
E +KPD ITY+ VL+ C+HG L + G + +YNM+ I+P H+ +VDLLGRAG
Sbjct: 358 EENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAG 417
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++EA++FI+ MP P WGSLL +CRVH ++++G I +KLL +EP+N+G Y L N
Sbjct: 418 RVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSN 477
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY+S GKWED NIR M+ V K G SWV++ VH F D HP+R+ + NK+ +
Sbjct: 478 LYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKE 537
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ + KE G+VPD + VL+DV+E+ KE++L HSEKLA+AFGLI+TPE TT+R++KNLR+
Sbjct: 538 LSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRI 597
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCHS KF+ +L R +++RD RFH+ G+CSC DYW
Sbjct: 598 CVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 175 bits (444), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 218/499 (43%), Gaps = 99/499 (19%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
E Y +L + R G+ VH +IK SV+L+ L+ Y K + + A+ +FD
Sbjct: 62 FEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFD 121
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
EMP R+ VSWT +I Y++ G A+ +
Sbjct: 122 EMP-------------------------------QRNVVSWTAMISAYSQRGFAFEALNL 150
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
FVEM++ P FT ++L SC G+++HS +K + V +SLL+MYAK
Sbjct: 151 FVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAK 210
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
SGR+ A F + ERDVV ++I+GY
Sbjct: 211 -------------------------------SGRICDAHGVFHCLPERDVVACTAIISGY 239
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+Q G D EAL +F L+ + + T AS L+A + L L GKQ+H++++R+ +
Sbjct: 240 AQMGLDEEALKLF-RQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 298
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+ N+LI Y+K G V A RRIFDS+
Sbjct: 299 VVLLNSLIDMYSKCGNVCYA---------------------------------RRIFDSM 325
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHG 431
+R ++W AMLVGY ++G+ ++ +ELF+ M E KP++ T A+LS S D G
Sbjct: 326 PERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMG 385
Query: 432 KQIHASAL--RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
+I + + + G + ++ + +AG + A + + W S++ +
Sbjct: 386 LEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSC 445
Query: 490 AQHGLGEEAIQLFERMLEL 508
H E I + +++LEL
Sbjct: 446 RVHSDVEIGIIVGQKLLEL 464
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/757 (35%), Positives = 417/757 (55%), Gaps = 99/757 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H ++K GL VF+ N+LM Y + + YA+ VFD+M
Sbjct: 112 LGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMM--------------- 156
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
RD VSW+T+I + + F A+ + EM QV P++ + S
Sbjct: 157 ----------------ERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVS 200
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNV--TNSLLNMYAKVGDEMMAKAVFDGMRL 208
++ ++ GK +H++V++ + + V T +LL+MYAK G
Sbjct: 201 MVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCG-------------- 246
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
L LAR F+ + ++ VV+W +MIAG ++ E +F M
Sbjct: 247 -----------------HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRM 289
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ ++ P++ T+ S + C L+LGKQ+HAYI+R F + + AL+
Sbjct: 290 -QEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALV-------- 340
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
D Y K DI AR +FDS ++RDV+ WTAML Y
Sbjct: 341 -------------------------DMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYA 375
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q A LF M G +P T+ ++LS+ + +LD GK +H+ +
Sbjct: 376 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCI 435
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ AL+ MY+K G+INAA R+F + ++ W ++I A HG GEEA+ +F M
Sbjct: 436 LNTALVDMYAKCGDINAAGRLF-IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 494
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+KP+ IT++G+L AC+H GLV +G++ + M + + P H+ MVDLLGRAGLL E
Sbjct: 495 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDE 554
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A+ I++MP++P+ + WG+L++ACR+HKN LG++AA +LL IEP+N G + N+Y++
Sbjct: 555 AHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAA 614
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
+W DAA +RK+MK VG+KK G S +++ VH F + D HPQ I +A++ +
Sbjct: 615 ANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRK 674
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+ E G+VPDT++VL +++E+ KE L +HSEKLA+AFGLIST +T +RI+KNLRVCNDC
Sbjct: 675 LNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDC 734
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+A K + K+ R I+VRD RFHHF++G CSC DYW
Sbjct: 735 HAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 174/392 (44%), Gaps = 78/392 (19%)
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
F S L AC + +LGK+IH ++++ D VGNAL+ Y + VE
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEY------- 147
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
AR +FD + +RDVV+W+ M+ +N A+E
Sbjct: 148 --------------------------ARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 181
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV--SNALITM 456
L R M +P+ + +M+++ + A++ GK +HA +R+ + V + AL+ M
Sbjct: 182 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 241
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y+K G++ AR++FN + ++ VSWT+MI + EE +LF RM E I P+ IT
Sbjct: 242 YAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEIT 300
Query: 517 YVGVLTACTHGGLVEQGQRYY-------------------NMMKNVHKIKPTPSHFAS-- 555
+ ++ C G ++ G++ + +M I+ + F S
Sbjct: 301 MLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQ 360
Query: 556 ---------MVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLGK- 602
M+ +A + +A+N + M + P V SLLS C V LDLGK
Sbjct: 361 NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKW 420
Query: 603 ----IAAEKLLLIEPDNSGAYSALCNLYSSCG 630
I E+ +E D +AL ++Y+ CG
Sbjct: 421 VHSYIDKER---VEVD-CILNTALVDMYAKCG 448
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
N+ ++L ++ GK+IH L+ G + V NAL+ MY + + AR VF+
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ R + VSW++MI +L+++ + A++L M + ++P + V ++ +
Sbjct: 154 KMMER-DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMR 212
Query: 532 QGQRYYNMM----KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G+ + + N H PT + M G GL ++ +N + + VV+W +
Sbjct: 213 MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT----QKTVVSWTA 268
Query: 588 LLSACRVHKNLDLG 601
+++ C L+ G
Sbjct: 269 MIAGCIRSNRLEEG 282
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/641 (39%), Positives = 384/641 (59%), Gaps = 35/641 (5%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+F+ S+L + + + + G ++H K G + L+ MYA + + D
Sbjct: 121 RFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYAS------CRRIMD 174
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
AR FD+M D V WN +I GY QNG+ +AL +
Sbjct: 175 -------------------------ARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRL 209
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F +M + S +KPD L + LSAC + L G+ IH ++ + + ALI+ YA
Sbjct: 210 FEDM-RSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
G +++A+KI + G+S ++I T +L GY K+G + AR IFD + +RD+V W+AM+
Sbjct: 269 NCGAMDLARKIYD--GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMI 326
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY ++ ++A++LF M+++ P+ T+ +++S S + +L IH RSG
Sbjct: 327 SGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFG 386
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+LSV+NALI MY+K GN+ AR VF + R+ +SW+SMI A A HG + AI+LF R
Sbjct: 387 RALSVNNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGNADSAIKLFRR 445
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M E+ I+P+ +T++GVL AC H GLVE+G++ ++ M N H I PT H+ MVDL RA
Sbjct: 446 MKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRAN 505
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L++A IE MP P+V+ WGSL+SAC+VH +LG+ AA++LL +EPD+ GA L N
Sbjct: 506 FLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSN 565
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+ +W D IRKSM Y G+ K + S ++I N+VH+F + D H Q D IY K+ +
Sbjct: 566 IYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDE 625
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++K +G+ P T+ +L D+EE+ K++++ HSEKLA+ +GLIS + +RI+KNLR+
Sbjct: 626 VVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRI 685
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCHS +K + K+ EIVVRD TRFHH G+CSCRDYW
Sbjct: 686 CEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 257/531 (48%), Gaps = 55/531 (10%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
+ PNP + S + HL +S+ + F L H L F SL+ +K
Sbjct: 79 QIPNPHTHFSN-QLLRHLSRSSFPEKTIF---LYHNLRAINAFALDRFSFPSLLKAVSKV 134
Query: 62 ESISYAKKV---------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+ ++ ++ D+ ++T +++ YA R+ A +F+ M + D+V+
Sbjct: 135 SAFNHGLEIHGLASKLGFVDDPFIQT-----GLIAMYASCRRIMDARLLFDKMCHPDAVA 189
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W II Y + G + +A+R+F +M + P + +VL++C G+LS G+ +H FV
Sbjct: 190 WNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVK 249
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
G + ++ +L+NMYA G +A+ ++DG+ K++ ++S + G + AR
Sbjct: 250 DNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARF 309
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
FDQMIERD+V W++MI+GY+++ EAL +F ML+ S+ PD+ T+ S +SAC+++
Sbjct: 310 IFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV-PDQITMLSVISACSHVG 368
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L IH Y+ R+ F V NALI YAK G + A++
Sbjct: 369 ALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKARE------------------ 410
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
+F+++ ++V++W++M+ + +G A++LFR M +PN
Sbjct: 411 ---------------VFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 455
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFN 471
T +L ++ G+++ +S + G + + ++ +Y +A + A +
Sbjct: 456 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 515
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ + + W S++ A HG E +R+LEL +PDH + VL+
Sbjct: 516 TMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLEL--EPDHDGALVVLS 564
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 179/359 (49%), Gaps = 15/359 (4%)
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N ++ S++ + + + ++ N+ ++ D+F+ S L A + + G +IH
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
+ F + LI+ YA + A+ + ++ + + + +A+ ++DGY + G A
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDK--MCHPDAVAWNMIIDGYCQNGHYDDA 206
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL-----SAMLS 420
R+F+ +R D+ + +L + + R+ + E K N Y + +A+++
Sbjct: 207 LRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRT-IHEFVKDNGYAIDSHLQTALIN 265
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ ++ ++D ++I+ + L VS A+++ Y+K G + AR +F+ + R + V
Sbjct: 266 MYANCGAMDLARKIYDGL----SSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIER-DLV 320
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
W++MI A+ +EA++LF+ ML+ PD IT + V++AC+H G + Q + +
Sbjct: 321 CWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYV 380
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+ + A ++D+ + G L +A ENMP +V++W S+++A +H N D
Sbjct: 381 DRSGFGRALSVNNA-LIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGNAD 437
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/691 (38%), Positives = 405/691 (58%), Gaps = 39/691 (5%)
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
A VF + + + W T++ Y +A++++V M+ +LP +T +L SC
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 158 LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
G+++H V+K G + V SL++MYA+ G A VFD ++V S+ +
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
++ + SG + A+ FD++ +DVV+WN+MI+GY++ G EAL +F M+K ++++PD
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK-TNVRPD 197
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+ T+ + LSACA ++LG+Q+H++I F + + NALI
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALI----------------- 240
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
D Y K G + A +F+ L +DVV+W ++ GY L K+A+
Sbjct: 241 ----------------DLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEAL 284
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE--ASSLSVSNALIT 455
LF+ M+R G PN+ T+ ++L + L ++D G+ IH + + ++ S+ +LI
Sbjct: 285 LLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLID 344
Query: 456 MYSKAGNINAARRVFN-LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+K G+I AA +VFN ++H + SW +MI A HG LF RM + GI+PD
Sbjct: 345 MYAKCGDIEAAHQVFNSMLH--KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDD 402
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
IT+VG+L+AC+H G ++ G+ + M + I P H+ M+DLLG +GL +EA I+
Sbjct: 403 ITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIK 462
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
MP+EPD V W SLL ACR H NL+L + A L+ +EP+N G+Y L N+Y++ G+W++
Sbjct: 463 TMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDE 522
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A +R + G+KK G S ++I ++VH F V D LHP+ IY + ++ ++E GF
Sbjct: 523 VAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGF 582
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +CH A K
Sbjct: 583 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 642
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K+ REI+ RD TRFHHF+ G+CSC D+W
Sbjct: 643 VSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 229/426 (53%), Gaps = 9/426 (2%)
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
L H A + F + E + + WN+M+ GY+ + AL ++ M+ L P+ +
Sbjct: 9 LSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMIS-LGLLPNSY 67
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T L +CA + + G+QIH ++++ ++ V +LIS YA+ G +E A K+ ++S
Sbjct: 68 TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
S+ +V+++T L+ GY G+I A+ +FD + +DVV+W AM+ GY + G K+A+EL
Sbjct: 128 --SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALEL 185
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F+ M++ +P+ T+ +LS + S++ G+Q+H+ G S+L + NALI +YSK
Sbjct: 186 FKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSK 245
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G + A +F + + + VSW ++I L +EA+ LF+ ML G P+ +T V
Sbjct: 246 CGQVETACGLFEGLSCK-DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVS 304
Query: 520 VLTACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
+L AC H G ++ G+ + + K + + PS S++D+ + G ++ A+ +M L
Sbjct: 305 ILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM-L 363
Query: 579 EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSSCGKWEDAA 636
+ +W +++ +H + G ++ IEPD+ + L + S GK +
Sbjct: 364 HKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDI-TFVGLLSACSHSGKLDLGR 422
Query: 637 NIRKSM 642
+I KSM
Sbjct: 423 HIFKSM 428
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 236/502 (47%), Gaps = 70/502 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G +++ SL++ YA+ + A KVFD
Sbjct: 69 FPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSS 128
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA G + A E+F+ +P +D VSW +I Y E G +K A+ +F E
Sbjct: 129 HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKE 188
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +VL++C + G++VHS++ G + + N+L+++Y+K G
Sbjct: 189 MMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+G+ K+V SW N++I GY+
Sbjct: 249 VETACGLFEGLSCKDVVSW-------------------------------NTLIGGYTHM 277
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP- 314
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI + D T
Sbjct: 278 NLYKEALLLFQEMLR-SGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAP 336
Query: 315 -VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +LI YAK GDI A ++F+S+
Sbjct: 337 SLRTSLIDMYAKC---------------------------------GDIEAAHQVFNSML 363
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+ + +W AM+ G+ +G +LF M + G +P++ T +LS S LD G+
Sbjct: 364 HKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRH 423
Query: 434 IHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
I S + + + L +I + +G A+ + + + V W S++ A +H
Sbjct: 424 IFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRH 483
Query: 493 GLGEEAIQLFERMLELGIKPDH 514
G E A + F R L + ++P++
Sbjct: 484 GNLELA-ESFARNL-MKVEPEN 503
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/638 (39%), Positives = 391/638 (61%), Gaps = 36/638 (5%)
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ N LL++YAK G+ A+ +FD M ++V SWN ++S + SG ++ RA FDQM D
Sbjct: 60 LQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHD 119
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V++N++IAG+S NG +AL F M ++ + +T S L AC+ L +K GKQIH
Sbjct: 120 AVSYNTVIAGFSGNGCSSQALEFFVRM-QEEGFESTDYTHVSVLHACSQLLDIKRGKQIH 178
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQ----KIVEQSGISYLNVIA--------- 348
I+ T + V NAL + YAK G ++ A+ ++V ++ +S+ ++I+
Sbjct: 179 GRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPE 238
Query: 349 --------------------FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ +L Y + G I A + F ++++D V WT M+VG
Sbjct: 239 TCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCA 298
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QNG +DA+ LFR M+ E +P+N+T+S+++S + LASL G+ +H A+ G L
Sbjct: 299 QNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLL 358
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
VS+AL+ MYSK G A VF + R +SW SMI+ AQ+G EA+ L+E ML
Sbjct: 359 VSSALVDMYSKCGETADAWIVFKRMLTRN-VISWNSMILGYAQNGKDLEALALYEEMLHE 417
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+KPD+IT+VGVL+AC H GLVE+GQ Y+ + +H + PT H++ M++LLGRAG + +
Sbjct: 418 NLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDK 477
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A + I++M EP+ + W +LLS CR++ +++ G++AA L ++P N+G Y L N+Y++
Sbjct: 478 AVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAA 537
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
CG+W+D A +R MK +KK +SW++I N+VH F ED H + + IY ++ ++ +
Sbjct: 538 CGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKK 597
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE-NTTLRIMKNLRVCND 747
++E GF PDT VLHDV E+ K + +HSEKLA+AF LI P T +RIMKN+RVC D
Sbjct: 598 LQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGD 657
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH +KF+ K++ R I++RD RFHHF +G CSC+D W
Sbjct: 658 CHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 254/513 (49%), Gaps = 77/513 (15%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL----SVFLKNSLMNFYAKTESISYAKK 69
E Y LL ++S + K + + LHL FL+N L++ YAK+ ++S A+
Sbjct: 23 ESYTRLLLQCVRSNDVVQAKRLQTHM---DLHLYQPTDTFLQNRLLHLYAKSGNLSDARD 79
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
+FD+M + + SWN +LSAY+K G ++ VF+ M D+VS+ T+I ++ G A
Sbjct: 80 LFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQA 139
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ FV M ++ T +T SVL +C+ L D+ GK++H +V T L V V N+L NM
Sbjct: 140 LEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNM 199
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR----------------------- 226
YAK G A+ +FD M KNV SWN ++S ++ +G+
Sbjct: 200 YAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTI 259
Query: 227 ------------LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+D A F ++ E+D V W +M+ G +QNG + +AL +F ML + ++
Sbjct: 260 SNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLE-NV 318
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PD FT++S +S+CA L L G+ +H G A+I
Sbjct: 319 RPDNFTISSVVSSCARLASLCQGQAVH--------------GKAVI-------------- 350
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
G+ + +++ + L+D Y K G+ A +F + R+V++W +M++GY QNG +
Sbjct: 351 ----FGVDH-DLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDL 405
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNAL 453
+A+ L+ M+ E KP+N T +LS ++ G+ S + G + + +
Sbjct: 406 EALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCM 465
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
I + +AG ++ A + + + + W++++
Sbjct: 466 INLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLL 498
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/637 (39%), Positives = 379/637 (59%), Gaps = 67/637 (10%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L CT L+ G+ VH ++++ + + N+LLNMYAK G
Sbjct: 55 NTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS------------- 101
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
L+ AR FD+M ERD VTW ++I+GYSQ+ F+AL +F M
Sbjct: 102 ------------------LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQM 143
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L+ P++FTL+S + A A + G Q+H + ++ FD+ VG+AL
Sbjct: 144 LR-FGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL--------- 193
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
LD Y + G + A+ +FD+L R+ V+W A++ G+
Sbjct: 194 ------------------------LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+ + A+ELF+ M+REG +P++++ +++ SS L+ GK +HA ++SGE
Sbjct: 230 RRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
N L+ MY+K+G+I+ AR++F+ + +++ VSW S++ A AQHG G EA+ FE M
Sbjct: 290 AGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRG 348
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
GI+P+ I+++ VLTAC+H GL+++G YY +MK I H+ ++VDLLGRAG L
Sbjct: 349 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVLEAWHYVTIVDLLGRAGDLNR 407
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FIE MP+EP W +LL+ACR+HKN +LG AAE + ++PD+ G + L N+Y+S
Sbjct: 408 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 467
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W DAA +RK MK GVKK SWV+I+N +H+F D HPQR+ I K ++ +
Sbjct: 468 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 527
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IKE+G+VPDT+ V+ V++ +E L++HSEK+A+AF L++TP +T+ I KN+RVC DC
Sbjct: 528 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 587
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HSAIK K V REI+VRD RFHHFK G CSC+DYW
Sbjct: 588 HSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 197/431 (45%), Gaps = 67/431 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+L+ YAK G L+ A +VF+ MP RD V+WTT+I Y++ R +A+ +F +M++
Sbjct: 90 NTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFS 149
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT++SV+ + A G ++H F VK G V+V ++LL++Y + G A+ V
Sbjct: 150 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 209
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + +N SW N++IAG+++ +AL
Sbjct: 210 FDALESRNDVSW-------------------------------NALIAGHARRCGTEKAL 238
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ML++ +P F+ AS AC++ L+ GK +HAY+I++ GN L+
Sbjct: 239 ELFQGMLRE-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 297
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+KI FD L RDVV+W +
Sbjct: 298 YAKSGSIHDARKI---------------------------------FDRLAKRDVVSWNS 324
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+L Y Q+G +AV F M R G +PN + ++L+ S LD G + + G
Sbjct: 325 LLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 384
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ + +AG++N A R + W +++ A H E
Sbjct: 385 IVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 444
Query: 503 ERMLELGIKPD 513
E + EL PD
Sbjct: 445 EHVFEL--DPD 453
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 64/282 (22%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
SP EF + ++++ R G +H +KCG +V + ++L++ Y + + A+
Sbjct: 148 FSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ 207
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
VFD + + SWN +++ +A++ C +
Sbjct: 208 LVFDALESRNDVSWNALIAGHARR------CGT-------------------------EK 236
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ +F M+++ P+ F+ S+ +C++ G L GK VH++++K+G N+LL+
Sbjct: 237 ALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 296
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK G A+ +FD + ++V SW NS+
Sbjct: 297 MYAKSGSIHDARKIFDRLAKRDVVSW-------------------------------NSL 325
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
+ Y+Q+G+ EA+ F M + ++P++ + S L+AC++
Sbjct: 326 LTAYAQHGFGNEAVCWFEEM-RRGGIRPNEISFLSVLTACSH 366
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 31/164 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +IK G L F N+L++ YAK+ SI A+K+FD + + + SWN++L+AYA+
Sbjct: 272 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 331
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++V W F EM + + P + + SV
Sbjct: 332 HGF------------GNEAVCW-------------------FEEMRRGGIRPNEISFLSV 360
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
L +C+ G L G + + K G+ +++++ + GD
Sbjct: 361 LTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGD 404
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/641 (39%), Positives = 386/641 (60%), Gaps = 74/641 (11%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---VGDEMMAKAVFDGM 206
SVL C + + G++VH+ ++KT V + L+ +Y K +GD
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD----------- 63
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
AR D+M ER+VV+W +MI+GYSQ GY EAL +F
Sbjct: 64 -----------------------ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 100
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML S P++FT A+ L++C + +LG+QIH+ +I+T F++ VG
Sbjct: 101 EMLM-SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVG---------- 149
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
++LLD Y K G I ARR+FD L +RDVV+ TA++ G
Sbjct: 150 -----------------------SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 186
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q GL+++A++LFR + REG + N T +++L+ S LA+LDHG+Q+H+ LR+
Sbjct: 187 YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY 246
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ + N+LI MYSK G++ +RR+F+ + R +SW +M+V ++HGLG EA++LF+ M
Sbjct: 247 VVLQNSLIDMYSKCGSLTYSRRIFDSMPERT-VISWNAMLVGYSKHGLGREAVELFKLMK 305
Query: 507 ELG-IKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
E +KPD +T++ VL+ C+HGG+ ++G + +Y M+ +P H+ +VDL GRAG
Sbjct: 306 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 365
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++EA+ FI+ MP EP WGSLL ACRVH+N+ +G+ A +LL IE +N+G Y L N
Sbjct: 366 RVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSN 425
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY+S G+W+D +R+ MK V K G SW+++ +H F D HP+++ ++ K+ +
Sbjct: 426 LYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRE 485
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ +IKE G+VP+ + VL+DV+++ KE++L+ HSEKLA+AFGLI TP T +RI+KNLR+
Sbjct: 486 LSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRI 545
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ KF+ ++ RE+ +RD RFHH G CSC DYW
Sbjct: 546 CVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 211/464 (45%), Gaps = 99/464 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +IK V+L+ L+ Y K + A++V DEMP
Sbjct: 29 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP---------------- 72
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R+ VSWT +I Y++ G A+ +FVEM+ P +FT +V
Sbjct: 73 ---------------ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATV 117
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L SCT+ G+++HS V+KT + V +SLL+MYAK G A+ VFDG+
Sbjct: 118 LTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP---- 173
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
ERDVV+ ++I+GY+Q G D EAL +F + ++
Sbjct: 174 ---------------------------ERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 206
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ + T AS L+A + L L G+Q+H++++R + + N+LI Y+K G +
Sbjct: 207 -GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTY 265
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+++ IFDS+ +R V++W AMLVGY ++G
Sbjct: 266 SRR---------------------------------IFDSMPERTVISWNAMLVGYSKHG 292
Query: 392 LNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASAL--RSGEASSLS 448
L ++AVELF+ M E KP++ T A+LS S D G +I + + G +
Sbjct: 293 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 352
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++ ++ +AG + A + + W S++ A H
Sbjct: 353 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 396
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 65/331 (19%)
Query: 11 SPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+P EF +A +L S S +G+ +H+ +IK +F+ +SL++ YAK I A++
Sbjct: 108 APNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 167
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFD +P + + S I+S YA+ G LD + A
Sbjct: 168 VFDGLPERDVVSCTAIISGYAQLG-LD------------------------------EEA 196
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ +F + ++ + T SVL + + L L G++VHS V++ L V + NSL++M
Sbjct: 197 LDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM 256
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y+K G ++ +FD M + V ++WN+M+
Sbjct: 257 YSKCGSLTYSRRIFDSMPERTV-------------------------------ISWNAML 285
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE- 308
GYS++G EA+ +F M +++ +KPD T + LS C++ G +I ++ +
Sbjct: 286 VGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD 345
Query: 309 -FDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
F+ ++ + + G VE A + +++
Sbjct: 346 GFEPEIEHYGCVVDLFGRAGRVEEAFEFIKK 376
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH+ +++ L V L+NSL++ Y+K S++Y++++FD MP +T+ SWN +L Y+K
Sbjct: 231 GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSK 290
Query: 92 QGRLDLACEVFNLMPNR-----DSVSWTTIIVTYNEIGRFKNAIRMFVEMV--QDQVLPT 144
G A E+F LM DSV++ ++ + G + +F EMV +D P
Sbjct: 291 HGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPE 350
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL-----NMYAKVGDEMMA 199
V+ G ++ F+ K + SLL + +G E +A
Sbjct: 351 IEHYGCVV---DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIG-EFVA 406
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+ + + + +N ++ ++ +L+ +GR D R + M E+ V+
Sbjct: 407 RRLLE-IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 449
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/754 (36%), Positives = 428/754 (56%), Gaps = 71/754 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ F + + ++YA VFD + L WNT+ +
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A+ ++V M+ ++P +T
Sbjct: 79 AL---------------SSDPVS----------------ALYLYVCMISLGLVPNSYTFP 107
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L +C G+++H V+K G + V SL+ MY K G A+ VFD +
Sbjct: 108 FLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHR 167
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ ++ + +G + A+ FD++ +DVV+WN++I+GY++ G EAL +F M+
Sbjct: 168 DVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM 227
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K +++KPD+ T+ + LSACA ++LG+Q+H++I F + + NALI
Sbjct: 228 K-TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALI--------- 277
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
D YIK G++ A +F+ L +DV++W ++ GY
Sbjct: 278 ------------------------DLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTH 313
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN T+ ++L + L ++D G+ IH + G ++
Sbjct: 314 MNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPS 373
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S+ +LI MY+K G+I AA++VF+ + R + SW +MI A HG A +F RM +
Sbjct: 374 SLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS-SWNAMIFGFAMHGRANPAFDIFSRMRK 432
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI+PD IT+VG+L+AC+H G+++ G+ + M +KI P H+ M+DLLG +GL +
Sbjct: 433 DGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I +M ++PD V W SLL AC++H N++LG+ A+ L+ IEP NSG+Y L N+Y+
Sbjct: 493 EAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYA 552
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G+W + A R + G+KK G S ++I + VH F + D LHP+ IY + ++
Sbjct: 553 TAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEV 612
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++E GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
CH A K I K+ REI+ RD TRFHHF G+CSC
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 230/491 (46%), Gaps = 71/491 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL++ KS+ G+ +H ++K G L +++ SL+ Y K A+KVFD+
Sbjct: 106 FPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSS 165
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ ++ YA G + A ++F+ +P +D VSW +I Y E G +K A+ +F E
Sbjct: 166 HRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKE 225
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +VL++C + G++VHS++ G + + N+L+++Y K G+
Sbjct: 226 MMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+G+ K+V SW N++I GY+
Sbjct: 286 VETASGLFEGLSYKDVISW-------------------------------NTLIGGYTHM 314
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP- 314
EAL +F ML+ S P++ T+ S L ACA+L + +G+ IH YI + + P
Sbjct: 315 NLYKEALLLFQEMLR-SGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPS 373
Query: 315 -VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +LI YAK G +E AQ+ +FDS+
Sbjct: 374 SLRTSLIDMYAKCGDIEAAQQ---------------------------------VFDSML 400
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+R + +W AM+ G+ +G A ++F M ++G +P++ T +LS S LD G+
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRH 460
Query: 434 IHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
I S + + L +I + +G A + N + + V W S++ A H
Sbjct: 461 IFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMH 520
Query: 493 G---LGEEAIQ 500
G LGE Q
Sbjct: 521 GNVELGESFAQ 531
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/706 (38%), Positives = 404/706 (57%), Gaps = 43/706 (6%)
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQ 145
+A++ LD A +VF+ +P + SW +I ++ +F+ M+ D P +
Sbjct: 181 AAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNK 240
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT ++ + GK VH +KT V V NSL++ YA G
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCG----------- 289
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE---RDVVTWNSMIAGYSQNGYDFEAL 262
LDLA F +MIE +D+V+WNSM+ G+ Q GY +AL
Sbjct: 290 --------------------HLDLAYLVF-EMIEGNNKDIVSWNSMVTGFVQGGYPDKAL 328
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + P+ T+ S +SACA L LG+++ YI R E V NA I
Sbjct: 329 DLFERM-RNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDM 387
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+ K G VEIA+ + + + +V+++TT++DGY K+ + G AR IFDS+ +D+ AW
Sbjct: 388 FVKCGEVEIARGLFDN--MEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNV 445
Query: 383 MLVGYEQNGLNKDAVELFRSM--VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
++ GYEQ+G K+A+ +FR + + G +P+ TL + LS + L ++D G+ IH +
Sbjct: 446 LISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKK 505
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+ +++ +LI MYSK+G++ A VF+ I ++ W++MI LA HG GE AI+
Sbjct: 506 ERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGRGEAAIE 564
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF M E +KP+ +T+ +L AC+H GLV++G+R ++ M+ V+ + P H++ MVD+L
Sbjct: 565 LFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVL 624
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L+EA FIE MPL P WG+LL AC +H NL+L + A +LL IEP N GAY
Sbjct: 625 GRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYV 684
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L NLY+ G WE + +R+ M+ G+KK G S ++I VH F V D HP IY
Sbjct: 685 LLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYA 744
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
K+ +I ++ G+V +T +L V EE++KE+ L+ HSEK+AIAFGLI +RI+
Sbjct: 745 KLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIV 804
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH+ K + K+ R+IV+RD RFHHF G CSC+DYW
Sbjct: 805 KNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 238/517 (46%), Gaps = 72/517 (13%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S P +F +L + R F VGK VH IK VF+ NSL++FYA
Sbjct: 234 SPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASC----- 288
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIG 124
G LDLA VF ++ N+D VSW +++ + + G
Sbjct: 289 --------------------------GHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGG 322
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
A+ +F M + V P T+ SV+++C +L+ G+KV ++ + + +NV N
Sbjct: 323 YPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCN 382
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+ ++M+ K G+ +A+ +FD M ++V SW ++ + +AR FD M +D+
Sbjct: 383 ATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPA 442
Query: 245 WNSMIAGYSQNGYDFEALGMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
WN +I+GY Q+G EAL +F + L S +PD+ TL STLSACA L + +G+ IH Y
Sbjct: 443 WNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGY 502
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I + + +LI Y+K G VE K +E
Sbjct: 503 IKKERIQLNRNLATSLIDMYSKSGDVE---KAIE-------------------------- 533
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+F S+ ++DV W+AM+ G +G + A+ELF M KPN+ T + +L S
Sbjct: 534 ----VFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACS 589
Query: 424 SLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+D GK++ R G + ++ + +AG++ A + + W
Sbjct: 590 HSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVW 649
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKP-DHITYV 518
+++ A HG E A + R+LE I+P +H YV
Sbjct: 650 GALLGACCIHGNLELAEKACSRLLE--IEPGNHGAYV 684
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 127/546 (23%), Positives = 241/546 (44%), Gaps = 98/546 (17%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
T A+ T +GD + ++ SF + + TN L + YA E+ A F
Sbjct: 131 TPASATATNVGDRALFQQCTSFKQLKQIHAQMLRTNKLHDPYA--ASELFTAAAF----- 183
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
SS++ LD AR FDQ+ + ++ +WN +I + + +++ +F M
Sbjct: 184 ---SSFSA----------LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRM 230
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L DS P+KFT + A A +GK +H I+T F V N+LI YA G
Sbjct: 231 LHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGH 290
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+++A + E + +++++ +++ G++
Sbjct: 291 LDLAYLVFEMIEGNNKDIVSWNSMVTGFV------------------------------- 319
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q G A++LF M EG PN T+ +++S + +L G+++ R+ +L+
Sbjct: 320 QGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLN 379
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI---VALAQHGLG---------- 495
V NA I M+ K G + AR +F+ + +++ VSWT++I +++HG+
Sbjct: 380 VCNATIDMFVKCGEVEIARGLFDNME-KRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRK 438
Query: 496 ------------------EEAIQLFERMLEL---GIKPDHITYVGVLTACTHGGLVEQGQ 534
+EA+ +F R L+L G +PD +T + L+AC G ++ G+
Sbjct: 439 DIPAWNVLISGYEQSGRPKEALAIF-RELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+ +K +I+ + S++D+ ++G +++A ++ DV W ++++ +
Sbjct: 498 WIHGYIKK-ERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAM 555
Query: 595 HKNLDLGKIAAEKLLLIEPD----NSGAYSALCNLYSSCGKWEDAANIRKSMK--YVGVK 648
H G+ A E L ++ NS ++ L S G ++ + M+ Y V
Sbjct: 556 HGR---GEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVP 612
Query: 649 KTQGFS 654
KT+ +S
Sbjct: 613 KTKHYS 618
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 148/299 (49%), Gaps = 41/299 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +++S ++ + K+ N +G+ V I + + +++ + N+ ++ + K
Sbjct: 341 PNAVTMVS-------VMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ +FD M + + SW TI+ YAK +A ++F+ MP +D +W +I Y +
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453
Query: 124 GRFKNAIRMFVE--MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
GR K A+ +F E + + P Q T+ S L++C LG + G+ +H ++ K + N
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ SL++MY+K GD A VF HS + +D
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVF-------------------HS------------IGNKD 542
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
V W++MIAG + +G A+ +F +M +++ +KP+ T + L AC++ + GK++
Sbjct: 543 VFVWSAMIAGLAMHGRGEAAIELFLDM-QETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/706 (37%), Positives = 399/706 (56%), Gaps = 68/706 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+++ AY + GR+ A +VF+ M RD +W ++ R A+ +F MV + V
Sbjct: 107 GSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVA 166
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
TV+SVL C LGD +H + VK GL + V N+L+++Y K+G A+ V
Sbjct: 167 GDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCV 226
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F GM RD+VTWNS+I+G Q G AL
Sbjct: 227 FHGMEC-------------------------------RDLVTWNSIISGCEQRGQTAAAL 255
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
MF M + S + PD TL S SA A + K +H Y++R +D
Sbjct: 256 KMFQGM-RGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVD---------- 304
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
++IA ++D Y K+ +I A+R+FDS+ +D V+W
Sbjct: 305 ----------------------DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT 342
Query: 383 MLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY QNGL +AVE + M + EG K T ++L S L +L G ++HA +++
Sbjct: 343 LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI 402
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + V LI +Y+K G + A +F + R+ T W ++I L HG G EA+ L
Sbjct: 403 GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP-RRSTGPWNAIISGLGVHGHGAEALTL 461
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F RM + GIKPDH+T+V +L AC+H GLV+QG+ ++++M+ + I P H+A M D+LG
Sbjct: 462 FSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLG 521
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L EA+NFI+NMP++PD WG+LL ACR+H N+++GK+A++ L ++P+N G Y
Sbjct: 522 RAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 581
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF--GVEDWLHPQRDAIY 679
+ N+Y+ GKW+ +R ++ ++KT G+S ++++ V+VF G + HPQ + I
Sbjct: 582 MSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQ 641
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
++ + +I+ +G+V D + VL DVE+D KE +L +HSE+LAIAFG+I+TP T L I
Sbjct: 642 AELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIY 701
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH+A K+I ++ +REI+VRD+ RFHHFK G CSC D+W
Sbjct: 702 KNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 200/430 (46%), Gaps = 53/430 (12%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
++ A A+ G+ +V + +V ++ GR+ A FD+M ERDV WN+M++G +N
Sbjct: 88 QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRN 147
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EA+G+F M+ + + D T++S L C L L +H Y ++ D V
Sbjct: 148 ARAAEAVGLFGRMVGE-GVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFV 206
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NALI Y K+G +E AQ +F + R
Sbjct: 207 CNALIDVYGKLGMLEEAQC---------------------------------VFHGMECR 233
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V W +++ G EQ G A+++F+ M G P+ TL ++ S + K +H
Sbjct: 234 DLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLH 293
Query: 436 ASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+R G + + NA++ MY+K NI AA+R+F+ + Q++VSW ++I Q+GL
Sbjct: 294 CYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPV-QDSVSWNTLITGYMQNGL 352
Query: 495 GEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
EA++ + M + G+K T+V VL A +H G ++QG R + + + +
Sbjct: 353 ANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI-GLNVDVYVG 411
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--- 610
++DL + G L EA E MP W +++S VH + AE L L
Sbjct: 412 TCLIDLYAKCGKLAEAMLLFEKMP-RRSTGPWNAIISGLGVHGH------GAEALTLFSR 464
Query: 611 -----IEPDN 615
I+PD+
Sbjct: 465 MQQEGIKPDH 474
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 195/447 (43%), Gaps = 76/447 (17%)
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
K L N ++ Y K G L+ A VF+ M RD V+W +II + G+ A++MF M
Sbjct: 202 KELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGM 261
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGD 195
V P T+ S+ ++ GD + K +H +V++ G + N++++MYAK+ +
Sbjct: 262 RGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSN 321
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD M +++ SW N++I GY QN
Sbjct: 322 IEAAQRMFDSMPVQDSVSW-------------------------------NTLITGYMQN 350
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA+ + +M K LK + T S L A ++L L+ G ++HA I+ + V
Sbjct: 351 GLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYV 410
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G LI YAK G K+ E A +F+ + R
Sbjct: 411 GTCLIDLYAKCG------KLAE---------------------------AMLLFEKMPRR 437
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
W A++ G +G +A+ LF M +EG KP++ T ++L+ S +D G+
Sbjct: 438 STGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFF 497
Query: 436 ASALRSGEASSLSVSNALIT-MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
+ + ++ A + M +AG ++ A + + ++ W +++ A HG
Sbjct: 498 DVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGN 557
Query: 494 --LGEEAIQ-LFERMLELGIKPDHITY 517
+G+ A Q LFE + P+++ Y
Sbjct: 558 VEMGKVASQNLFE------LDPENVGY 578
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 159/348 (45%), Gaps = 40/348 (11%)
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDS-SLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
N++IA +S+ A + ++L + +PD FT S + A + Q+HA
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R G+ +V +L+ Y++ G I
Sbjct: 94 LRL--------------------------------GLVRPSVFTSGSLVHAYLRFGRISE 121
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A ++FD + +RDV AW AML G +N +AV LF MV EG + T+S++L +
Sbjct: 122 AYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVL 181
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +H A++ G L V NALI +Y K G + A+ VF+ + R + V+W S
Sbjct: 182 LGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECR-DLVTWNS 240
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNV 543
+I Q G A+++F+ M G+ PD +T V + +A GG + + +M+
Sbjct: 241 IISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRG 300
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + A +VD+ + ++ A ++MP++ D V+W +L++
Sbjct: 301 WDVDDIIAGNA-IVDMYAKLSNIEAAQRMFDSMPVQ-DSVSWNTLITG 346
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 63/267 (23%)
Query: 33 KLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
K +H +++ G + + N++++ YAK +I A+++FD MPV+ SWNT+++ Y +
Sbjct: 290 KSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQ 349
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A E + M + + Q T SV
Sbjct: 350 NGLANEAVERYGHMQKHEGLK------------------------------AIQGTFVSV 379
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + + LG L G ++H+ +K GL+ V V L+++YAK G A +F+ M ++
Sbjct: 380 LPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRST 439
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
WN ++S G +G+ EAL +F+ M ++
Sbjct: 440 GPWNAIIS-------------------------------GLGVHGHGAEALTLFSRMQQE 468
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGK 298
+KPD T S L+AC++ + G+
Sbjct: 469 -GIKPDHVTFVSLLAACSHAGLVDQGR 494
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 42/160 (26%)
Query: 8 SLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
+ +S L Y+HL LQ ++ +HA IK GL++ V++ L++ YAK ++
Sbjct: 375 TFVSVLPAYSHLGALQQGMR---------MHALSIKIGLNVDVYVGTCLIDLYAKCGKLA 425
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A +F++MP ++ WN I+S G
Sbjct: 426 EAMLLFEKMPRRSTGPWNAIISGLGVH-------------------------------GH 454
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
A+ +F M Q+ + P T S+LA+C+ G + G+
Sbjct: 455 GAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR 494
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/788 (34%), Positives = 438/788 (55%), Gaps = 73/788 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+ ARI+K G N + + K +S A+++F++MP K S N ++S Y K G
Sbjct: 34 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A ++F+ M R +V+WT +I Y+++ +FK A +FV+M + P T ++L+
Sbjct: 94 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR------- 207
C + +V + ++K G + V N+L++ Y K +A +F M
Sbjct: 154 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTF 213
Query: 208 -----------------------LKNVSSWNVVVSLHI------HSGRLDLARAQFDQMI 238
+K WNV VS + H +D AR FD+M
Sbjct: 214 AAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVID-ARKLFDEMP 272
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
E+D V++N +I+GY+ +G A +F L+ ++ +F A+ LS +N ++G+
Sbjct: 273 EQDGVSYNVIISGYAWDGKHKYAFDLFRE-LQFTAFDRKQFPFATMLSIASNTLDWEMGR 331
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
QIHA I T D+ VGN+L+ YA K
Sbjct: 332 QIHAQTIVTTADSEILVGNSLVDMYA---------------------------------K 358
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
G A IF +L R V WTAM+ Y Q G ++ ++LF M + + T +++
Sbjct: 359 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 418
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L S+S+ASL GKQ+H+ ++SG S++ +AL+ +Y+K G+I A + F + R
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRN- 477
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSW +MI A AQ+G E ++ F+ M+ G++PD ++++GVL+AC+H GLVE+G ++N
Sbjct: 478 IVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFN 537
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M ++K+ P H+AS+VD+L R+G EA + MP++PD + W S+L+ACR+HKN
Sbjct: 538 SMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQ 597
Query: 599 DLGKIAAEKLLLIEP-DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
+L + AA++L +E ++ Y + N+Y++ G+WE+ + + K+M+ GVKK +SWV+
Sbjct: 598 ELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVE 657
Query: 658 IQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHH 717
I+++ H+F D HPQ + I K+ + ++E+G+ PDT+ LH+ +E K + L++H
Sbjct: 658 IKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYH 717
Query: 718 SEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
SE+LAIAF LISTPE + + +MKNLR C DCH+AIK I K+V REI VRD+TRFHHF+ G
Sbjct: 718 SERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDG 777
Query: 778 LCSCRDYW 785
CSC D+W
Sbjct: 778 FCSCGDFW 785
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 232/481 (48%), Gaps = 46/481 (9%)
Query: 152 LASCTALGDLSAGK-------KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
L S T+L L + K + + +VKTG + +N + + K G+ A+ +F+
Sbjct: 12 LTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFE 71
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M KN S N+++S ++ SG L AR FD M+ER VTW +I GYSQ EA +
Sbjct: 72 KMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFEL 131
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +PD T + LS C E Q+ II+ +D+ VGN L+ Y
Sbjct: 132 FVQMQR-CGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYC 190
Query: 325 KVGGVEIAQKIVEQS----------------GISYL-----------------NVIAFTT 351
K +++A ++ ++ G+ + NV
Sbjct: 191 KSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNA 250
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
LLD Y K + AR++FD + ++D V++ ++ GY +G +K A +LFR +
Sbjct: 251 LLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 310
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF- 470
+ + MLS++S+ + G+QIHA + + S + V N+L+ MY+K G A +F
Sbjct: 311 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 370
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
NL H + V WT+MI A Q G EE +QLF +M + + D T+ +L A +
Sbjct: 371 NLTH--RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 428
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
G++ ++ + + S ++++D+ + G +++A + MP + ++V+W +++S
Sbjct: 429 SLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMIS 486
Query: 591 A 591
A
Sbjct: 487 A 487
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 74/344 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L +N+ + +G+ +H+ +IK +VF+ N+L++FY+K +S+ A+K+FDEMP
Sbjct: 213 FAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 272
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFN-----------------LMPNRDSVSW----- 113
+ S+N I+S YA G+ A ++F L +++ W
Sbjct: 273 EQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ 332
Query: 114 ---TTIIVT--------------YNEIGRFKNA--------------------------- 129
TI+ T Y + G+F+ A
Sbjct: 333 IHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGF 392
Query: 130 ----IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
+++F +M Q V+ Q T S+L + ++ LS GK++HSF++K+G V ++
Sbjct: 393 YEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSA 452
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERD 241
LL++YAK G A F M +N+ SWN ++S + +G + F +M+ + D
Sbjct: 453 LLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPD 512
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
V++ +++ S +G E L F +M + L P + AS +
Sbjct: 513 SVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVV 556
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
S+I+ +A LL+++ + +GK +H+ IIK G +VF ++L++ YAK SI A
Sbjct: 407 SVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 466
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTIIVTYNEI 123
+ F EMP + + SWN ++SAYA+ G + + F M DSVS+ ++ +
Sbjct: 467 VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 526
Query: 124 GRFKNAIRMFVEMVQ 138
G + + F M Q
Sbjct: 527 GLVEEGLWHFNSMTQ 541
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/731 (37%), Positives = 401/731 (54%), Gaps = 89/731 (12%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDS-----VSWTTIIVTYNEIGRFKNAIRMFVE 135
++N +LS YA+ G +D A +F + DS V+W T++ + GR AI + +
Sbjct: 202 AFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYD 261
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK-TGLSGCVNVTNSLLNMYAKVG 194
MV V P T S L +C+ L LS G+++H++V+K + L+ V ++L++MYA
Sbjct: 262 MVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHE 321
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+A+ VFD +V H R + WN+M+ GY+Q
Sbjct: 322 RVGVARRVFD-----------MVPGGH------------------RQLGLWNAMVCGYAQ 352
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G D EAL +FA M ++ + P + T+A L ACA E + +H Y+++
Sbjct: 353 AGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPF 412
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V NAL+ YA++G +E A R IF ++
Sbjct: 413 VQNALMDLYARLGDMEAA---------------------------------RWIFAAIEP 439
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP------------------KPNNYTLS 416
RDVV+W ++ G G DA +L R M ++G PNN TL
Sbjct: 440 RDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLM 499
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L + LA+ GK+IH A+R S ++V +AL+ MY+K G + +R VF+ + R
Sbjct: 500 TLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR 559
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGLVEQGQR 535
++W +I+A HGLG+EAI LF+RM + KP+ +T++ L AC+H G+V++G
Sbjct: 560 N-VITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGME 618
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM-PLEPDVVAWGSLLSACRV 594
++ MK H ++PTP A VD+LGRAG L EAY+ I +M P E V AW S L ACR+
Sbjct: 619 LFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRL 678
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H+N+ LG+IAAE+L +EPD + Y LCN+YS+ G WE ++ +R M+ GV K G S
Sbjct: 679 HRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCS 738
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQML 714
W+++ +H F + HP+ ++ M +W+ ++ G+ PDT+SVLHD+EE K +L
Sbjct: 739 WIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAIL 798
Query: 715 RHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
R+HSEKLAIAFGL+ TP T+R+ KNLRVCNDCH A KFI ++V REIV+RD RFHHF
Sbjct: 799 RYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHF 858
Query: 775 KKGLCSCRDYW 785
G CSC DYW
Sbjct: 859 VDGACSCGDYW 869
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 250/543 (46%), Gaps = 98/543 (18%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +L+AYA+ G L A +FN MP+RD+V++ ++I R+ A+ +M+ +
Sbjct: 100 NALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP 159
Query: 143 PTQFTVTSVLASCTALG-DLSAGKKVHSFVVKTG-LSGCVNVT-NSLLNMYAKVGDEMMA 199
+ FT+ SVL +C+ L DL G++ H+F +K G L G N+LL+MYA++G A
Sbjct: 160 LSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 219
Query: 200 KAVFDGMRLKN-----VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ +F + + V +WN +VSL + SGR A M+ R V
Sbjct: 220 QMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGV------------ 267
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-TEFDATG 313
+PD T AS L AC+ LE L LG+++HAY+++ ++ A
Sbjct: 268 --------------------RPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANS 307
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V +AL+ YA E+ G+ ARR+FD +
Sbjct: 308 FVASALVDMYAS----------HERVGV-----------------------ARRVFDMVP 334
Query: 374 D--RDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDH 430
R + W AM+ GY Q G++++A+ELF M E G P+ T++ +L + +
Sbjct: 335 GGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAG 394
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
+ +H L+ G A + V NAL+ +Y++ G++ AAR +F I R + VSW ++I
Sbjct: 395 KEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPR-DVVSWNTLITGCV 453
Query: 491 QHGLGEEAIQLFERMLELG------------------IKPDHITYVGVLTACTHGGLVEQ 532
G +A QL M + G + P+++T + +L C +
Sbjct: 454 VQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAK 513
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G+ + H + + +++VD+ + G L + + +P + +V+ W L+ A
Sbjct: 514 GKEIHGYAMR-HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITWNVLIMAY 571
Query: 593 RVH 595
+H
Sbjct: 572 GMH 574
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 228/527 (43%), Gaps = 102/527 (19%)
Query: 31 VGKLVHARIIK-CGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV--KTLCSWNTILS 87
+G+ +HA ++K L + F+ ++L++ YA E + A++VFD +P + L WN ++
Sbjct: 289 LGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVC 348
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
YA+ G + A E+F M + V+P++ T
Sbjct: 349 GYAQAGMDEEALELFARME------------------------------AEAGVVPSETT 378
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ VL +C + + VH +V+K G++ V N+L+++YA++GD A+ +F +
Sbjct: 379 IAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIE 438
Query: 208 LKNVSSWNV-----VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
++V SWN VV HIH L R Q D T + IAG +
Sbjct: 439 PRDVVSWNTLITGCVVQGHIHDA-FQLVREMQQQGRFTDATTEDG-IAGTDEE------- 489
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ P+ TL + L CA L GK+IH Y +R D+ VG+AL+
Sbjct: 490 ----------PVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDM 539
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + + +R +FD L R+V+ W
Sbjct: 540 YAKCGCLAL---------------------------------SRAVFDRLPKRNVITWNV 566
Query: 383 MLVGYEQNGLNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+++ Y +GL +A+ LF MV KPN T A L+ S +D G ++ S R+
Sbjct: 567 LIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRN 626
Query: 442 -GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQH---GLGE 496
G + + + + +AG ++ A + + ++ VS W+S + A H LGE
Sbjct: 627 HGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGE 686
Query: 497 EAIQLFERMLELGIKPDHIT-YVGVLTACTHGGLVEQGQRYYNMMKN 542
A ER+ +L +PD + YV + + GL E+ N M+
Sbjct: 687 IAA---ERLFQL--EPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQ 728
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 209/474 (44%), Gaps = 94/474 (19%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGL--SGCVNVTNSLLNMYAKVGDEMMAKAV 202
F + S AL L A + +H ++ L V N+LL YA+ GD A A+
Sbjct: 59 HFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALAL 118
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M RD VT+NS+IA AL
Sbjct: 119 FNAMP-------------------------------SRDAVTFNSLIAALCLFRRWLPAL 147
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANL-EKLKLGKQIHAYIIRTEF-DATGPVG-NAL 319
+ML + FTL S L AC++L E L+LG++ HA+ ++ F D NAL
Sbjct: 148 DALRDMLLEGH-PLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNAL 206
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+S YA++G V+ AQ +L G + D P VV
Sbjct: 207 LSMYARLGLVDDAQ------------------MLFGSVDTTD-SPG---------GGVVT 238
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W M+ Q+G +A+E+ MV G +P+ T ++ L S L L G+++HA L
Sbjct: 239 WNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVL 298
Query: 440 RSGEASSLS-VSNALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQHGLGEE 497
+ + ++ S V++AL+ MY+ + ARRVF+++ + W +M+ AQ G+ EE
Sbjct: 299 KDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEE 358
Query: 498 AIQLFERM-LELGIKPDHITYVGVLTACT-----------HGGLVEQGQRYYNMMKNVHK 545
A++LF RM E G+ P T GVL AC HG ++++G ++N
Sbjct: 359 ALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQN--- 415
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP-DVVAWGSLLSACRVHKNL 598
+++DL R G ++ A +EP DVV+W +L++ C V ++
Sbjct: 416 ---------ALMDLYARLGDMEAARWIFA--AIEPRDVVSWNTLITGCVVQGHI 458
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 144/289 (49%), Gaps = 28/289 (9%)
Query: 30 FVGK-LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
F GK VH ++K G+ + F++N+LM+ YA+ + A+ +F + + + SWNT+++
Sbjct: 392 FAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITG 451
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM--FVEMVQDQVLPTQF 146
QG + A ++ M + GRF +A ++ V+P
Sbjct: 452 CVVQGHIHDAFQLVREM---------------QQQGRFTDATTEDGIAGTDEEPVVPNNV 496
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T+ ++L C L + GK++H + ++ L + V ++L++MYAK G +++AVFD +
Sbjct: 497 TLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRL 556
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI-----ERDVVTWNSMIAGYSQNGYDFEA 261
+NV +WNV++ + G D A A FD+M+ + + VT+ + +A S +G
Sbjct: 557 PKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRG 616
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
+ +F +M ++ ++P L ACA + G+ AY I T +
Sbjct: 617 MELFHSMKRNHGVQP-----TPDLHACAVDILGRAGRLDEAYSIITSME 660
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P GK +H ++ L + + ++L++ YAK ++ ++ VFD +P + + +WN ++ A
Sbjct: 511 PAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMA 570
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y G D A +F+ M ++ ++ P + T
Sbjct: 571 YGMHGLGDEAIALFDRM------------------------------VMSNEAKPNEVTF 600
Query: 149 TSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ LA+C+ G + G ++ HS G+ ++ +++ + G A ++ M
Sbjct: 601 IAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSME 660
Query: 208 L--KNVSSWN 215
+ VS+W+
Sbjct: 661 PGEQQVSAWS 670
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 104/267 (38%), Gaps = 66/267 (24%)
Query: 426 ASLDHG------------------KQIHASALRSG--EASSLSVSNALITMYSKAGNINA 465
A LDH + IH +ALR + +V+NAL+T Y++ G++ A
Sbjct: 55 APLDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTA 114
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A +FN + R + V++ S+I AL A+ ML G T V VL AC+
Sbjct: 115 ALALFNAMPSR-DAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACS 173
Query: 526 H--------------------------------------GGLVEQGQRYYNMMKNVHKIK 547
H GLV+ Q + +
Sbjct: 174 HLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPG 233
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ +MV LL ++G EA I +M + PD + + S L AC + L LG+
Sbjct: 234 GGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR-E 292
Query: 605 AEKLLLIEPD---NSGAYSALCNLYSS 628
+L + D NS SAL ++Y+S
Sbjct: 293 MHAYVLKDSDLAANSFVASALVDMYAS 319
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/641 (39%), Positives = 386/641 (60%), Gaps = 74/641 (11%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---VGDEMMAKAVFDGM 206
SVL C + + G++VH+ ++KT V + L+ +Y K +GD
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD----------- 530
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
AR D+M ER+VV+W +MI+GYSQ GY EAL +F
Sbjct: 531 -----------------------ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 567
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML S P++FT A+ L++C + +LG+QIH+ +I+T F++
Sbjct: 568 EMLM-SGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFES--------------- 611
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
++ ++LLD Y K G I ARR+FD L +RDVV+ TA++ G
Sbjct: 612 ------------------HIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISG 653
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q GL+++A++LFR + REG + N T +++L+ S LA+LDHG+Q+H+ LR+
Sbjct: 654 YAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY 713
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ + N+LI MYSK G++ +RR+F+ + R +SW +M+V ++HGLG EA++LF+ M
Sbjct: 714 VVLQNSLIDMYSKCGSLTYSRRIFDSMPERT-VISWNAMLVGYSKHGLGREAVELFKLMK 772
Query: 507 ELG-IKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
E +KPD +T++ VL+ C+HGG+ ++G + +Y M+ +P H+ +VDL GRAG
Sbjct: 773 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 832
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++EA+ FI+ MP EP WGSLL ACRVH+N+ +G+ A +LL IE +N+G Y L N
Sbjct: 833 RVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSN 892
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY+S G+W+D +R+ MK V K G SW+++ +H F D HP+++ ++ K+ +
Sbjct: 893 LYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRE 952
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ +IKE G+VP+ + VL+DV+++ KE++L+ HSEKLA+AFGLI TP T +RI+KNLR+
Sbjct: 953 LSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRI 1012
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ KF+ ++ RE+ +RD RFHH G CSC DYW
Sbjct: 1013 CVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 211/464 (45%), Gaps = 99/464 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +IK V+L+ L+ Y K + A++V DEMP
Sbjct: 496 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP---------------- 539
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R+ VSWT +I Y++ G A+ +FVEM+ P +FT +V
Sbjct: 540 ---------------ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATV 584
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L SCT+ G+++HS V+KT + V +SLL+MYAK G A+ VFDG+
Sbjct: 585 LTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP---- 640
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
ERDVV+ ++I+GY+Q G D EAL +F + ++
Sbjct: 641 ---------------------------ERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 673
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ + T AS L+A + L L G+Q+H++++R + + N+LI Y+K G +
Sbjct: 674 -GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTY 732
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+++ IFDS+ +R V++W AMLVGY ++G
Sbjct: 733 SRR---------------------------------IFDSMPERTVISWNAMLVGYSKHG 759
Query: 392 LNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASAL--RSGEASSLS 448
L ++AVELF+ M E KP++ T A+LS S D G +I + + G +
Sbjct: 760 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 819
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++ ++ +AG + A + + W S++ A H
Sbjct: 820 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 65/331 (19%)
Query: 11 SPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+P EF +A +L S S +G+ +H+ +IK +F+ +SL++ YAK I A++
Sbjct: 575 APNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 634
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFD +P + + S I+S YA+ G LD + A
Sbjct: 635 VFDGLPERDVVSCTAIISGYAQLG-LD------------------------------EEA 663
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ +F + ++ + T SVL + + L L G++VHS V++ L V + NSL++M
Sbjct: 664 LDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM 723
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y+K G ++ +FD M + V ++WN+M+
Sbjct: 724 YSKCGSLTYSRRIFDSMPERTV-------------------------------ISWNAML 752
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE- 308
GYS++G EA+ +F M +++ +KPD T + LS C++ G +I ++ +
Sbjct: 753 VGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKD 812
Query: 309 -FDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
F+ ++ + + G VE A + +++
Sbjct: 813 GFEPEIEHYGCVVDLFGRAGRVEEAFEFIKK 843
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
N+ E M +G + ++L+ S ++ G+++HA +++ + +
Sbjct: 458 NRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTR 517
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI +Y+K + ARRV + + R VSWT+MI +Q G EA+ LF ML G P
Sbjct: 518 LIVLYNKCRCLGDARRVLDEMPERN-VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAP 576
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT-PSHF---ASMVDLLGRAGLLQE 568
+ T+ VLT+CT + G++ ++++ IK + SH +S++D+ +AG + E
Sbjct: 577 NEFTFATVLTSCTSSSGFQLGRQIHSLV-----IKTSFESHIFVGSSLLDMYAKAGKICE 631
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A + +P E DVV+ +++S
Sbjct: 632 ARRVFDGLP-ERDVVSCTAIISG 653
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH+ +++ L V L+NSL++ Y+K S++Y++++FD MP +T+ SWN +L Y+K
Sbjct: 698 GRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSK 757
Query: 92 QGRLDLACEVFNLMPNR-----DSVSWTTIIVTYNEIGRFKNAIRMFVEMV--QDQVLPT 144
G A E+F LM DSV++ ++ + G + +F EMV +D P
Sbjct: 758 HGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPE 817
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL-----NMYAKVGDEMMA 199
V+ G ++ F+ K + SLL + +G E +A
Sbjct: 818 IEHYGCVV---DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIG-EFVA 873
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+ + + + +N ++ ++ +L+ +GR D R + M E+ V+
Sbjct: 874 RRLLE-IESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 916
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/755 (36%), Positives = 428/755 (56%), Gaps = 99/755 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA ++K +++VF+ N+L ++ YA+
Sbjct: 301 GMFIHATVLKSSYYINVFVANAL-------------------------------IAMYAR 329
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G++ A +F M + D++SW +++ + + G + A++ + EM P V S+
Sbjct: 330 FGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 389
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+A+ G+ G ++H++ +K GL + V NSL++MYAK F M+ +
Sbjct: 390 IAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAK----------FCSMKYMDC 439
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
FD+M ++DVV+W ++IAG++QNG AL +F ++
Sbjct: 440 I---------------------FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE-VQL 477
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ D ++S L AC+ L+ + K+IH+YIIR
Sbjct: 478 EGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL---------------------- 515
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+V Q+GI +D Y + G++ A R+F+ + +DVV+WT+M+ Y NG
Sbjct: 516 -SDLVLQNGI-----------VDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 563
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L +A+ELF M G +P++ +L ++LS ++SL++L GK+IH +R G S+++
Sbjct: 564 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS 623
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
L+ MY++ G + +R VFN I ++ V WTSMI A HG G AI LF RM + I
Sbjct: 624 TLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 682
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PDHI +V VL AC+H GL+ +G+R+ MK ++++P P H+A +VDLLGRA L+EAY
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQ 742
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
F++ M +EP W +LL AC++H N +LG+IAA+KLL ++P+N G Y + N+YS+ +
Sbjct: 743 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERR 802
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI-K 690
W+D +R MK G+KK G SW+++ NKVH F D HPQ IY+K+++I +++ K
Sbjct: 803 WKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 862
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+V T VLH+ +E+ K QML HSE+LAIA+G+++TPE +LRI KNLRVC DCH+
Sbjct: 863 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHN 922
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K +RE+V+RDA RFHHFK G+CSC D W
Sbjct: 923 FCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 173/624 (27%), Positives = 272/624 (43%), Gaps = 126/624 (20%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESIS 65
PS S E Y+ +L+ + G+ VHA +I L SVFL L+ Y K +
Sbjct: 72 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A+K+FD M P++ +W +I Y G
Sbjct: 132 DAEKLFDGM-------------------------------PHKTIFTWNAMIGAYVTNGE 160
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
++ ++ EM + T +L +C L D G +VH +K G V V NS
Sbjct: 161 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANS 220
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
++ MY K D A+ +FD M K +V SW
Sbjct: 221 IVGMYTKCNDLNGARQLFDRMPEKEDVVSW------------------------------ 250
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
NSMI+ YS NG EAL +F M K +SL P+ +T + L AC + +K G IHA +
Sbjct: 251 -NSMISAYSSNGQSIEALRLFGEMQK-ASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 308
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+++ + V NALI+ YA + G +G
Sbjct: 309 LKSSYYINVFVANALIAMYA---------------------------------RFGKMGE 335
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A IF ++ D D ++W +ML G+ QNGL +A++ + M G KP+ + ++++ S+
Sbjct: 336 AANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASAR 395
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+ HG QIHA A+++G S L V N+L+ MY+K ++ +F+ + ++ VSWT+
Sbjct: 396 SGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTT 454
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
+I AQ+G A++LF + GI D + +L AC+ G + + +K +H
Sbjct: 455 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIH 507
Query: 545 K--IKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
I+ S +VD+ G G + A E + + DVV+W S++S C VH L
Sbjct: 508 SYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVHNGL- 564
Query: 600 LGKIAAEKLLL--------IEPDN 615
A E L L +EPD+
Sbjct: 565 ----ANEALELFHLMKETGVEPDS 584
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 164/337 (48%), Gaps = 42/337 (12%)
Query: 260 EALGMFANMLKDSSLKPDKFTL----ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EA ++ + S P +F+L +S L C + + L G+Q+HA++I +
Sbjct: 58 EAFQSLTDLFANQS--PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITS-------- 107
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL + +V T L+ Y K G + A ++FD + +
Sbjct: 108 -NALFN-----------------------SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 143
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ W AM+ Y NG ++EL+R M G + T +L L +G ++H
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A++ G S + V+N+++ MY+K ++N AR++F+ + +++ VSW SMI A + +G
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 263
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFA 554
EA++LF M + + P+ T+V L AC ++QG + ++K+ + I ++
Sbjct: 264 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN-- 321
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++ + R G + EA N NM + D ++W S+LS
Sbjct: 322 ALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSG 357
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/758 (36%), Positives = 429/758 (56%), Gaps = 71/758 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ F + E + YA VF + L WNT+ +
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A++++V M+ +LP +T
Sbjct: 110 AL---------------SSDPVS----------------ALKLYVCMISLGLLPNSYTFP 138
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL SC G+++H V+K G + V SL++MY + G A VFD +
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ ++ + G ++ A+ FD++ +DVV+WN+MI+GY++ G EAL +F +M+
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K ++++PD+ T+ + +SACA ++LG+Q+H +I F + + NALI
Sbjct: 259 K-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI--------- 308
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
D Y K G++ A +F+ L +DV++W ++ GY
Sbjct: 309 ------------------------DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH + G ++
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S+ +LI MY+K G+I AA +VFN I + SW +MI A HG + + LF RM +
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+GI+PD IT+VG+L+AC+H G+++ G+ + M +K+ P H+ M+DLLG +GL +
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I M +EPD V W SLL AC++H N++LG+ AE L+ IEP+N G+Y L N+Y+
Sbjct: 524 EAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYA 583
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G+W + A R + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 584 SAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 643
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+++ GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 644 LLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 703
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH A K I K+ REI+ RD TRFHHF+ G+CSC DYW
Sbjct: 704 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 236/501 (47%), Gaps = 70/501 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L+S KS+ G+ +H ++K G L +++ SL++ Y + + A KVFD+ P
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ ++ YA +G ++ A ++F+ +P +D VSW +I Y E G +K A+ +F +
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +V+++C G + G++VH ++ G + + N+L+++Y+K G+
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+ + K+V SW N++I GY+
Sbjct: 317 LETACGLFERLPYKDVISW-------------------------------NTLIGGYTHM 345
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT--G 313
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI + T
Sbjct: 346 NLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +LI YAK G DI A ++F+S+
Sbjct: 405 SLRTSLIDMYAKCG---------------------------------DIEAAHQVFNSIL 431
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+ + +W AM+ G+ +G + +LF M + G +P++ T +LS S LD G+
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 434 IHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
I + + + + L +I + +G A + N++ + V W S++ A H
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551
Query: 493 GLGEEAIQLFERMLELGIKPD 513
G E E +++ I+P+
Sbjct: 552 GNVELGESFAENLIK--IEPE 570
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIK--CGLHLSVFLKNSLMNFYA 59
ETPN +++S L AHL + +G+ +H I K G+ + L+ SL++ YA
Sbjct: 363 ETPNDVTMLSILPACAHLGAID-------IGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTT 115
K I A +VF+ + K+L SWN ++ +A GR D + ++F+ M D +++
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQD 139
++ + G +F M QD
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQD 499
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/704 (38%), Positives = 404/704 (57%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +L YA+ G +D A VF + ++D +SW +++ Y + + AI F EMVQ+
Sbjct: 303 NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + S+L++ LG L G++VH++ VK L + + N+L++MY K
Sbjct: 363 PDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKC--------- 413
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
++V S + FD+M +D V+W ++IA Y+Q+ EA+
Sbjct: 414 -----------YSVECSARV-----------FDRMRIKDHVSWTTIIACYAQSSRYSEAI 451
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G F K+ +K D + S L AC+ L+ + L KQ+H+Y IR N L
Sbjct: 452 GKFRTAQKEG-IKVDPMMMGSILEACSGLKSISLLKQVHSYAIR----------NGL--- 497
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
L++I ++D Y + G++ A IF+ L +D+V WT+
Sbjct: 498 ---------------------LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTS 536
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ + +NGL +AV LF M+ G +P++ L +L + L+SL GK+IH +R
Sbjct: 537 MVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGK 596
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+V ++L+ MYS G++N A +VF+ + + V WT+MI A HG G++AI +F
Sbjct: 597 FPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIF 655
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+RMLE G+ PDH++++ +L AC+H LV++G+ Y +MM + +K++P H+A +VDLLGR
Sbjct: 656 KRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGR 715
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+G +EAY FI++MPLEP V W +LL ACR+HKN +L IA +KLL +EPDN G Y +
Sbjct: 716 SGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLV 775
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+++ GKW + IR M G++K SW++I N VH F D H AI+ K+
Sbjct: 776 SNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKL 835
Query: 683 AKIWDEIKEMG-FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
A+I ++++ G +V DT+ VLHDV E+ K +L HSE+LAI+FGLIST T LRI KN
Sbjct: 836 AEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKN 895
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH K + KL +REIVVRDA RFHHF G CSC D+W
Sbjct: 896 LRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 197/742 (26%), Positives = 297/742 (40%), Gaps = 167/742 (22%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGL---HLSVFLKNSLMNFYAKTE 62
PP P + Y +L R G+ +HA + G + FL L+ Y K
Sbjct: 52 PP----PTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCG 107
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ A ++FD MP +T+ SWN ++ A G A V+ M + V+
Sbjct: 108 RLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAA------- 160
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
P T+ SVL +C A GD G +VH VK+GL V
Sbjct: 161 --------------------PDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLV 200
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N+L+ MYAK G A VF+ MR GR DV
Sbjct: 201 ANALVGMYAKCGLLDSALRVFEWMR----------------DGR--------------DV 230
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
+WNS I+G QNG EAL +F M D + +T L CA L +L G+++HA
Sbjct: 231 ASWNSAISGCVQNGMFLEALDLFRRMQSD-GFSMNSYTTVGVLQVCAELAQLNHGRELHA 289
Query: 303 YIIR--TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
+++ TEF+ NAL+ YA+ G V+
Sbjct: 290 ALLKCGTEFNIQ---CNALLVMYARCGWVD------------------------------ 316
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
A R+F + D+D ++W +ML Y QN L +A++ F MV+ G P++ + ++LS
Sbjct: 317 ---SALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLS 373
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
L L +G+++HA A++ S L ++N L+ MY K ++ + RVF+ + + + V
Sbjct: 374 AVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIK-DHV 432
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SWT++I AQ EAI F + GIK D + +L AC+ G + +++
Sbjct: 433 SWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS-------GLKSISLL 485
Query: 541 KNVHKI------------------------------------KPTPSHFASMVDLLGRAG 564
K VH K + SMV+ G
Sbjct: 486 KQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENG 545
Query: 565 LLQEA---YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE-PDNSGAYS 620
LL EA + + N ++PD VA +L A +L GK L+ + P S
Sbjct: 546 LLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVS 605
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
+L ++YS CG A + K V W + N + G + AIY
Sbjct: 606 SLVDMYSGCGSMNYALKVFDEAKCKDV-----VLWTAMINATGMHG------HGKQAIY- 653
Query: 681 KMAKIWDEIKEMGFVPDTASVL 702
I+ + E G PD S L
Sbjct: 654 ----IFKRMLETGVSPDHVSFL 671
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 37/271 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSW---NTILS 87
+GK A+ K G+ + + S++ + +SIS K+V L N I+
Sbjct: 451 IGKFRTAQ--KEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIID 508
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
Y + G + A +F ++ +D V+WT+++ + E G A+ +F +M+ + P
Sbjct: 509 IYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVA 568
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ +L + L L+ GK++H F+++ V +SL++MY+ G A VFD +
Sbjct: 569 LVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAK 628
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K DVV W +MI +G+ +A+ +F
Sbjct: 629 CK-------------------------------DVVLWTAMINATGMHGHGKQAIYIFKR 657
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
ML ++ + PD + + L AC++ + + GK
Sbjct: 658 ML-ETGVSPDHVSFLALLYACSHSKLVDEGK 687
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG---EASSLSVSNALITMY 457
RS P P ++ +L + + ++ G+Q+HA A+ +G + + ++ L+ MY
Sbjct: 45 RSARGRAPPPTDH-YGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMY 103
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE----LGIKPD 513
K G + A R+F+ + R SW ++I A G EA+ ++ M G PD
Sbjct: 104 GKCGRLPDAHRLFDGMPART-VFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPD 162
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
T VL AC G G + + + T A +V + + GLL A
Sbjct: 163 GCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANA-LVGMYAKCGLLDSALRVF 221
Query: 574 ENMPLEPDVVAWGSLLSAC 592
E M DV +W S +S C
Sbjct: 222 EWMRDGRDVASWNSAISGC 240
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 280/778 (35%), Positives = 426/778 (54%), Gaps = 101/778 (12%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
S P +FYA L+ ++ + ++A+++ GL FL L+N + +S A
Sbjct: 70 STFKPDKFYASLIDDSIHKTHL---NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCA 126
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+K+FD+ P + D W I+ Y+ G F
Sbjct: 127 RKLFDKFP-------------------------------DPDVFLWNAIVRCYSRHGFFG 155
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+AI M+ M V P F+ VL +C+AL L G++VH + + G V V N L+
Sbjct: 156 HAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLV 215
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+YAK G+ + A AVF GRL ++R +V+W S
Sbjct: 216 ALYAKCGEIVRANAVF---------------------GRL----------VDRTIVSWTS 244
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+I+GY+QNG EAL +F+ M K ++++PD L S L A ++E L+ GK IH +I+
Sbjct: 245 IISGYAQNGQPIEALRIFSEMRK-TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKM 303
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ + +L S YAK G V +A R
Sbjct: 304 GLECEFDLLISLTSLYAKCGHVMVA---------------------------------RL 330
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F+ + + ++ W AM+ GY +NG ++A+ELFR M + +P++ T+++ ++ + + S
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGS 390
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ + + S + + V+ +LI Y+K G+++ AR VF+ I ++ V W++M+V
Sbjct: 391 LELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMMV 449
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
HG G E+I LF M + G+ P+ +T+VG+LTAC + GLVE+G ++ M++ + I+
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIE 508
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+A +VDLLGRAG L AYNF+ NMP+EP V WG+LLSAC++H+++ LG+ AAE+
Sbjct: 509 PRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAER 568
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L ++P N+G Y L NLY+S W+ A +R M+ G+ K G+S ++I K+ F
Sbjct: 569 LFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQA 628
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HP+ I+ ++ + +KE GFVP T SVLHD+ + E+ L +HSE+LAIA+GL
Sbjct: 629 GDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGL 688
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ISTP TTLRI KNLR C++CH+AIK I KLV REIVVRDA RFHHFK G CSC DYW
Sbjct: 689 ISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 276/780 (35%), Positives = 449/780 (57%), Gaps = 69/780 (8%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S ISP ++ + L + KSR G +H I+K G +F++NSL++FYA+
Sbjct: 128 SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC----- 182
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
G LD A +VF+ M R+ VSWT++I Y
Sbjct: 183 --------------------------GELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 127 KNAIRMFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
K+A+ +F MV+D+ V P T+ V+++C L DL G+KV++F+ +G+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--------- 267
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
+V D M++ +V +++ +D+A+ FD+ ++
Sbjct: 268 ------EVNDLMVS----------------ALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N+M + Y + G EALG+F N++ DS ++PD+ ++ S +S+C+ L + GK H Y++
Sbjct: 306 NAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R F++ + NALI Y K + A +I ++ +S V+ + +++ GY++ G++ A
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDR--MSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSS 424
F+++ ++++V+W ++ G Q L ++A+E+F SM +EG + T+ ++ S
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +LD K I+ ++G + + L+ M+S+ G+ +A +FN + R + +WT+
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTA 541
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
I A+A G E AI+LF+ M+E G+KPD + +VG LTAC+HGGLV+QG+ + M +H
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+ MVDLLGRAGLL+EA IE+MP+EP+ V W SLL+ACRV N+++ A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AEK+ ++ P+ +G+Y L N+Y+S G+W D A +R SMK G++K G S +QI+ K H
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F D HP+ I + ++ +G VPD ++VL DV+E K ML HSEKLA+A
Sbjct: 722 FTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMA 781
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+GLIS+ + TT+RI+KNLRVC+DCHS KF K+ +REI++RD RFH+ ++G CSC D+
Sbjct: 782 YGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 69/379 (18%)
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+NS+I GY+ +G EA+ +F M+ +S + PDK+T LSACA G QIH I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
++ + V N+L+ YA+ G ++ A+K+ ++ +S NV++
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE--MSERNVVS---------------- 202
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSS 423
WT+M+ GY + KDAV+LF MVR E PN+ T+ ++S +
Sbjct: 203 ---------------WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 424 SLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
L L+ G++++A SG E + L VS AL+ MY K I+ A+R+F+ +
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLC- 305
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVE 531
+M + GL EA+ +F M++ G++PD I+ + +++C+ HG ++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 532 QGQRYY--------NMMKNVHK-----------IKPTPSHFASMVDLLGRAGLLQEAYNF 572
G + +M H+ T + S+V G + A+
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 573 IENMPLEPDVVAWGSLLSA 591
E MP E ++V+W +++S
Sbjct: 426 FETMP-EKNIVSWNTIISG 443
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/678 (37%), Positives = 402/678 (59%), Gaps = 37/678 (5%)
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
S W +I +Y + + +NA+ ++ ++ + F SVL +C + GK++H
Sbjct: 89 SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 148
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
FV+K GL V V N+L+ MY + ++
Sbjct: 149 FVLKKGLDRDVFVGNALMLMYGECAC-------------------------------VEY 177
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD+M+ERDVV+W++MI S+N AL + M ++P + + S ++ A
Sbjct: 178 ARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREM-NFMQVRPSEVAMVSMVNLFA 236
Query: 290 NLEKLKLGKQIHAYIIRTEFDATG--PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
+ +++GK +HAY+IR + P AL+ YAK G + +A+++ +G++ V+
Sbjct: 237 DTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLF--NGLTQKTVV 294
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++T ++ G I+ + AR +FDS ++RDV+ WTAML Y Q A LF M G
Sbjct: 295 SWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 354
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
+P T+ ++LS+ + +LD GK +H+ + ++ AL+ MY+K G+INAA
Sbjct: 355 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 414
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
R+F + ++ W ++I A HG GEEA+ +F M G+KP+ IT++G+L AC+H
Sbjct: 415 RLF-IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 473
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV +G++ + M + + P H+ MVDLLGRAGLL EA+ I++MP++P+ + WG+
Sbjct: 474 GLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 533
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
L++ACR+HKN LG++AA +LL IEP+N G + N+Y++ +W DAA +RK+MK VG+
Sbjct: 534 LVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 593
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
KK G S +++ VH F + D HPQ I +A++ ++ E G+VPDT++VL +++E
Sbjct: 594 KKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDE 653
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
+ KE L +HSEKLA+AFGLIST +T +RI+KNLRVCNDCH+A K + K+ R I+VRD
Sbjct: 654 EEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRD 713
Query: 768 ATRFHHFKKGLCSCRDYW 785
RFHHF++G CSC DYW
Sbjct: 714 RNRFHHFREGYCSCGDYW 731
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 231/494 (46%), Gaps = 78/494 (15%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H ++K GL VF+ N+LM Y + + YA+ VFD+M + + SW+T++ + +
Sbjct: 142 LGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLS 201
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ D+A E+ EM QV P++ + S
Sbjct: 202 RNKEFDMALELIR-------------------------------EMNFMQVRPSEVAMVS 230
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNV--TNSLLNMYAKVGDEMMAKAVFDGMRL 208
++ ++ GK +H++V++ + + V T +LL+MYAK G +A+ +F+G+
Sbjct: 231 MVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQ 290
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K V SW +++ I S RL+ ARA FD RDV+ W +M++ Y+Q +A +F M
Sbjct: 291 KTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 350
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ S ++P K T+ S LS CA L LGK +H+YI + + + AL+ YAK
Sbjct: 351 -RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC-- 407
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
GDI A R+F RD+ W A++ G+
Sbjct: 408 -------------------------------GDINAAGRLFIEAISRDICMWNAIITGFA 436
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSL 447
+G ++A+++F M R+G KPN+ T +L S + GK++ + + G +
Sbjct: 437 MHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQI 496
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGE-EAIQLFE 503
++ + +AG ++ A + + + T+ W +++ A H LGE A QL E
Sbjct: 497 EHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE 556
Query: 504 RMLELGIKPDHITY 517
I+P++ Y
Sbjct: 557 ------IEPENCGY 564
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 149/306 (48%), Gaps = 41/306 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCG--LHLSVFLKNSLMNFYAKT 61
P+ +++S + +A + N +GK +HA +I+ H+ V +L++ YAK
Sbjct: 223 PSEVAMVSMVNLFA-------DTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 275
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ A+++F+ + KT+ SW +++ + RL+ A +F+ NRD + WT ++ Y
Sbjct: 276 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYA 335
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ A +F +M V PT+ T+ S+L+ C G L GK VHS++ K +
Sbjct: 336 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCI 395
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ +L++MYAK GD A GRL F + I RD
Sbjct: 396 LNTALVDMYAKCGDINAA-------------------------GRL------FIEAISRD 424
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+ WN++I G++ +GY EAL +FA M + +KP+ T L AC++ + GK++
Sbjct: 425 ICMWNAIITGFAMHGYGEEALDIFAEM-ERQGVKPNDITFIGLLHACSHAGLVTEGKKLF 483
Query: 302 AYIIRT 307
++ T
Sbjct: 484 EKMVHT 489
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 281/757 (37%), Positives = 421/757 (55%), Gaps = 100/757 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H +++ GL V + N L+N Y K S+S A+
Sbjct: 953 LGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARS--------------------- 991
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VF M D +SW T+I G + ++ MFV +++D +LP QFTV S
Sbjct: 992 ----------VFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVAS 1041
Query: 151 VLASCTAL-GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL +C++L G ++H+ +K G+ V+ +L+++Y+K G M +A F
Sbjct: 1042 VLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGK--MEEAEF------ 1093
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
L ++ DLA +WN+++ GY +G +AL ++ ++
Sbjct: 1094 ----------LFVNQDGFDLA-------------SWNAIMHGYIVSGDFPKALRLYI-LM 1129
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++S + D+ TL + A L LK GKQIHA +++ F+
Sbjct: 1130 QESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN------------------- 1170
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
L++ + +LD Y+K G++ ARR+F + D VAWT M+ G +
Sbjct: 1171 --------------LDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVE 1216
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG + A+ + M +P+ YT + ++ S L +L+ G+QIHA+ ++ A V
Sbjct: 1217 NGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV 1276
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+L+ MY+K GNI AR +F + R+ SW +MIV LAQHG +EA+Q F+ M G
Sbjct: 1277 MTSLVDMYAKCGNIEDARGLFKRTNTRR-IASWNAMIVGLAQHGNAKEALQFFKYMKSRG 1335
Query: 510 IKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+ PD +T++GVL+AC+H GLV + + +Y+M KN + I+P H++ +VD L RAG ++E
Sbjct: 1336 VMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKN-YGIEPEIEHYSCLVDALSRAGRIEE 1394
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A I +MP E + +LL+ACRV + + GK AEKLL +EP +S AY L N+Y++
Sbjct: 1395 AEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAA 1454
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
+WE+ A+ R M+ V VKK GFSWV ++NKVH+F D H + D IYNK+ I
Sbjct: 1455 ANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKR 1514
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
I+E G+VPDT L DVEE+ KE L +HSEKLAIA+GL+ TP +TTLR++KNLRVC DC
Sbjct: 1515 IREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDC 1574
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HSAIK+I K+ REIV+RDA RFHHF+ G+CSC DYW
Sbjct: 1575 HSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 173/644 (26%), Positives = 282/644 (43%), Gaps = 125/644 (19%)
Query: 3 TPNPPS----LISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFY 58
T NP + LI L +L+ + + + +GK HARI+ G H F+ N+L+ Y
Sbjct: 642 TANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMY 701
Query: 59 AKTESISYAKKVFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTI 116
AK S+S A+K+FD P + L +WN ILSA A
Sbjct: 702 AKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHA----------------------- 738
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
+ + +F + + V T+ T+ V C SA + +H + VK GL
Sbjct: 739 -------DKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG----------- 225
V V +L+N+YAK G A+ +FDGM +++V WNV++ ++ +
Sbjct: 792 QWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSE 851
Query: 226 ------RLD-----------------LARAQFDQMIER---------DVVTWNSMIAGYS 253
R D L QF + DV+ WN ++ +
Sbjct: 852 FHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFL 911
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
Q G +EA+ F +M+ +S + D T L+ A L L+LGKQIH ++R+ D
Sbjct: 912 QRGEAWEAVDCFVDMI-NSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVV 970
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VGN LI+ Y K G V AR +F +
Sbjct: 971 SVGNCLINMYVKAGSV---------------------------------SRARSVFGQMN 997
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH-GK 432
+ D+++W M+ G +GL + +V +F ++R+ P+ +T++++L SSL +
Sbjct: 998 EVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLAT 1057
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
QIHA A+++G VS ALI +YSK G + A +F + + SW +++
Sbjct: 1058 QIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLF-VNQDGFDLASWNAIMHGYIVS 1116
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV--EQGQRYYNMMKNVHKIKPTP 550
G +A++L+ M E G + D IT V A GGLV +QG++ + + V K
Sbjct: 1117 GDFPKALRLYILMQESGERSDQITLVNAAKAA--GGLVGLKQGKQIHAV---VVKRGFNL 1171
Query: 551 SHFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
F + ++D+ + G ++ A +P PD VAW +++S C
Sbjct: 1172 DLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGC 1214
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/539 (23%), Positives = 222/539 (41%), Gaps = 103/539 (19%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
++ +HA +K G+ L F+ +L++ Y+K + A+ +F L SWN I+ Y
Sbjct: 1054 YLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGY 1113
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
IV+ G F A+R+++ M + Q T+
Sbjct: 1114 ---------------------------IVS----GDFPKALRLYILMQESGERSDQITLV 1142
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+ + L L GK++H+ VVK G + + VT+ +L+MY K G+
Sbjct: 1143 NAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGE-------------- 1188
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ AR F ++ D V W +MI+G +NG + AL + M
Sbjct: 1189 -----------------MESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQM- 1230
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ S ++PD++T A+ + AC+ L L+ G+QIHA I++ V +L+ YAK G +
Sbjct: 1231 RLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNI 1290
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E AR +F R + +W AM+VG Q
Sbjct: 1291 E---------------------------------DARGLFKRTNTRRIASWNAMIVGLAQ 1317
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLS 448
+G K+A++ F+ M G P+ T +LS S + + S ++ G +
Sbjct: 1318 HGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIE 1377
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ L+ S+AG I A +V + + + + +++ A E ++ E++L L
Sbjct: 1378 HYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLAL 1437
Query: 509 GIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+P D YV + E NMM+ V+ +K P S VDL + L
Sbjct: 1438 --EPSDSAAYVLLSNVYAAANQWENVASARNMMRKVN-VKKDPGF--SWVDLKNKVHLF 1491
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/754 (35%), Positives = 426/754 (56%), Gaps = 71/754 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ +HA++IK GLH + + + L+ F + + YA VFD + L WNT+ +
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A+++++ M+ +LP +T
Sbjct: 65 AL---------------SSDPVS----------------ALKLYLVMISLGLLPDSYTFP 93
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L SC G+++H V+K G + V SL++MYA+ G A+ VFD +
Sbjct: 94 FLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHR 153
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ +++ ++ G ++ A+ FD++ +DVV+WN+MI+GY + G EAL +F M+
Sbjct: 154 DVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMM 213
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++++PD+ T+ + +SACA + ++LG+ +H++I F + + NALI Y+K
Sbjct: 214 MMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSK---- 269
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
G++ A +FD L ++DV++W ++ GY
Sbjct: 270 -----------------------------FGEVETACELFDGLWNKDVISWNTLIGGYTH 300
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA---SALRSGEASS 446
L K+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH L+ +
Sbjct: 301 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNV 360
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
S+ +LI MY+K G+I+AA++VF+ + +W +MI A HG A +F RM
Sbjct: 361 SSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMR 420
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
GI+PD IT+VG+L+AC+H G+++ G+ + M ++I P H+ M+DLLG +GL
Sbjct: 421 MNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLF 480
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA I MP+EPD V W SLL AC++H NL+LG+ A+KL+ IEP NSG+Y L N+Y
Sbjct: 481 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIY 540
Query: 627 SSCGKWEDAANIRKSMKYVGV-KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
++ G+W + A IR + G+ KK G S ++I + VH F + D LHPQ IY + ++
Sbjct: 541 AAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEM 600
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
++E GFVPDT+ VL ++EE+ +E LRHHSEKLAIAFGLIST T L IMKNLRVC
Sbjct: 601 EVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVC 660
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
+CH A K I K+ REI+ RD TRF HF+ G+C
Sbjct: 661 KNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 229/490 (46%), Gaps = 74/490 (15%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G L +++ SL++ YA+ + A+KVFD
Sbjct: 92 FPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISS 151
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ Y +G ++ A ++F+ +P +D VSW +I Y E G +K A+ +F E
Sbjct: 152 HRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKE 211
Query: 136 -MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M+ V P + T+ +V+++C + G+ VHS++ G + + + N+L+++Y+K G
Sbjct: 212 MMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFG 271
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ A +FDG+ K+V SW N++I GY+
Sbjct: 272 EVETACELFDGLWNKDVISW-------------------------------NTLIGGYTH 300
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI---IRTEFDA 311
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI ++
Sbjct: 301 MNLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTN 359
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD- 370
+ +LI YAK G DI A+++FD
Sbjct: 360 VSSLQTSLIDMYAKCG---------------------------------DIDAAQQVFDS 386
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
S+ +R + W AM+ G+ +G A ++F M G +P++ T +LS S LD
Sbjct: 387 SMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDL 446
Query: 431 GKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G+ I S R E + L +I + +G A + N + + V W S++ A
Sbjct: 447 GRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKAC 506
Query: 490 AQHG---LGE 496
HG LGE
Sbjct: 507 KIHGNLELGE 516
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKC--GLHLSVF-LKNSLMNFY 58
ETPN +++S L AHL + +G+ +H I K G+ +V L+ SL++ Y
Sbjct: 319 ETPNDVTMLSILPACAHLGAID-------IGRWIHVYINKKLKGVVTNVSSLQTSLIDMY 371
Query: 59 AKTESISYAKKVFDE-MPVKTLCSWNTILSAYAKQGRLDLACEVFNLM 105
AK I A++VFD M ++L +WN ++S +A GR + A ++F+ M
Sbjct: 372 AKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM 419
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 278/781 (35%), Positives = 422/781 (54%), Gaps = 103/781 (13%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
PP L + + LL+ + G+ VHA++ G+ +L N YAK +
Sbjct: 56 PPVLRT----FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPA 111
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A++VFD MP RD V+W ++ Y G
Sbjct: 112 DARRVFDR-------------------------------MPVRDRVAWNALVAGYARNGL 140
Query: 126 FKNAIRMFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
+ A+ M V M +++ P T+ SVL +C L+A ++ H+F +++GL VNV
Sbjct: 141 ARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVAT 200
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
++L+ Y K GD A+ VFD W M ++ V+
Sbjct: 201 AILDAYCKCGDIRAARVVFD---------W----------------------MPTKNSVS 229
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
WN+MI GY+QNG EAL +F M+++ D LA+ L AC L L G ++H +
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA-LQACGELGCLDEGMRVHELL 288
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R D+ V NALI+ Y+K V++A
Sbjct: 289 VRIGLDSNVSVMNALITMYSKCKRVDLAS------------------------------- 317
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
+FD L R V+W AM++G QNG ++DAV LF M E KP+++TL +++ +
Sbjct: 318 --HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD 375
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++ + IH ++R + V ALI MY+K G +N AR +FN R ++W +
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERH-VITWNA 434
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI HG G+ A++LFE M +GI P+ T++ VL+AC+H GLV++G+ Y+ MK +
Sbjct: 435 MIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDY 494
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
++P H+ +MVDLLGRAG L EA+ FI+ MP++P + +G++L AC++HKN++L + +
Sbjct: 495 GLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEES 554
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
A+K+ + P + L N+Y++ W+D A +R +M+ G++KT G+S +Q++N++H
Sbjct: 555 AQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHT 614
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F H Q IY+++AK+ +EIK +G+VPDT S+ HDVE+DVK Q+L HSEKLAIA
Sbjct: 615 FYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIA 673
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
FGLI T TT++I KNLRVCNDCH+A K I + REI++RD RFHHFK G CSC DY
Sbjct: 674 FGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDY 733
Query: 785 W 785
W
Sbjct: 734 W 734
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 213/478 (44%), Gaps = 70/478 (14%)
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ FV M P T TS+L C A GDL+ G+ VH+ + G+ +L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK R AR FD+M RD V WN++
Sbjct: 103 MYAKCR-------------------------------RPADARRVFDRMPVRDRVAWNAL 131
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
+AGY++NG A+ M M ++ +PD TL S L ACAN L ++ HA+ IR+
Sbjct: 132 VAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSG 191
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ V A++ Y K G + A+ + + + N +++ ++DG
Sbjct: 192 LEELVNVATAILDAYCKCGDIRAARVVFDW--MPTKNSVSWNAMIDG------------- 236
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
Y QNG +++A+ LF MV EG + ++ A L L L
Sbjct: 237 ------------------YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
D G ++H +R G S++SV NALITMYSK ++ A VF+ + R+ VSW +MI+
Sbjct: 279 DEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-RRTQVSWNAMILG 337
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQ+G E+A++LF RM +KPD T V V+ A Q + + +H +
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQ 396
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+++D+ + G + A + N E V+ W +++ H GK A E
Sbjct: 397 DVYVLTALIDMYAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSHG---FGKAAVE 450
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 410/716 (57%), Gaps = 78/716 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G+L + + RD V+W T++ + + + A+ EMV + V
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT++SVL +C+ L L GK++H++ +K G L V ++L++MY + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFDGM FD R + WN+MIAGYSQN +D EA
Sbjct: 360 VFDGM---------------------------FD----RKIGLWNAMIAGYSQNEHDKEA 388
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + L + T+A + AC + IH ++++ D V N L+
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+++G ++IA RIF + DRD+V W
Sbjct: 449 MYSRLGKIDIAM---------------------------------RIFGKMEDRDLVTWN 475
Query: 382 AMLVGYEQNGLNKDAVELFRSM------VREGP-----KPNNYTLSAMLSVSSSLASLDH 430
M+ GY + ++DA+ L M V +G KPN+ TL +L ++L++L
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GK+IHA A+++ A+ ++V +AL+ MY+K G + +R+VF+ I ++ ++W +I+A
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 594
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG G+EAI L M+ G+KP+ +T++ V AC+H G+V++G R + +MK + ++P+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV-AWGSLLSACRVHKNLDLGKIAAEKLL 609
H+A +VDLLGRAG ++EAY + MP + + AW SLL A R+H NL++G+IAA+ L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP+ + Y L N+YSS G W+ A +R++MK GV+K G SW++ ++VH F D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HPQ + + + +W+ +++ G+VPDT+ VLH+VEED KE +L HSEKLAIAFG+++
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T T +R+ KNLRVCNDCH A KFI K+VDREI++RD RFH FK G CSC DYW
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 153/609 (25%), Positives = 277/609 (45%), Gaps = 93/609 (15%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
SP E++ LL+S ++S L + +I G+ + +L+ A + + K++
Sbjct: 61 SP-EWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 71 FDEM-----PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+ V ++ NT+++ Y K G +VF+ + R+ VSW ++I + +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG---DLSAGKKVHSFVVKTGLSGCVNV 182
++ A+ F M+ + V P+ FT+ SV+ +C+ L L GK+VH++ ++ G +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-I 238
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N+L+ MY K+G +K V L GR D+
Sbjct: 239 INTLVAMYGKLGKLASSK-----------------VLLGSFGGR--------------DL 267
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
VTWN++++ QN EAL M+ + ++PD+FT++S L AC++LE L+ GK++HA
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 303 YIIRT-EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y ++ D VG+AL+ D Y
Sbjct: 327 YALKNGSLDENSFVGSALV---------------------------------DMYCNCKQ 353
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLS 420
+ RR+FD + DR + W AM+ GY QN +K+A+ LF M G N+ T++ ++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ + IH ++ G V N L+ MYS+ G I+ A R+F + R + V
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLV 472
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLEL-----------GIKPDHITYVGVLTACTHGGL 529
+W +MI E+A+ L +M L +KP+ IT + +L +C
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 530 VEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+ +G+ + +KN + + +++VD+ + G LQ + + +P + +V+ W +
Sbjct: 533 LAKGKEIHAYAIKN--NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589
Query: 589 LSACRVHKN 597
+ A +H N
Sbjct: 590 IMAYGMHGN 598
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 27/284 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H ++K GL F++N+LM+ Y++ I A ++F +M + L +WNT+++ Y
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 95 LDLACEVFNLMPNRD-SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+ A + + M N + VS K A R+ ++ P T+ ++L
Sbjct: 487 HEDALLLLHKMQNLERKVS--------------KGASRVSLK-------PNSITLMTILP 525
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC AL L+ GK++H++ +K L+ V V ++L++MYAK G M++ VFD + KNV +
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 214 WNVVVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
WNV++ + G +DL R Q ++ + VT+ S+ A S +G E L +F M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
D ++P A + ++K Q+ + R +F+ G
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR-DFNKAG 688
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 15/261 (5%)
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A IF S + R W +L ++ L ++AV + M+ G KP+NY A+L
Sbjct: 48 VSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 422 SSSLASLDHGKQIHASALRSGEA-SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L ++ GKQIHA + G S++V+N L+ +Y K G+ A +VF+ I R + V
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ-V 165
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SW S+I +L E A++ F ML+ ++P T V V+TAC++ + E M
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG----LMMG 221
Query: 541 KNVHKIKPTPSHFAS-----MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CRV 594
K VH S +V + G+ G L + + + D+V W ++LS+ C+
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQN 280
Query: 595 HKNLDLGKIAAEKLLL-IEPD 614
+ L+ + E +L +EPD
Sbjct: 281 EQLLEALEYLREMVLEGVEPD 301
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA IK L V + ++L++ YAK + ++KVFD++P K + +WN I+ AY
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G A ++ +M PN V++ ++ + G +R+F M D
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNE--VTFISVFAACSHSGMVDEGLRIFYVMKPD 647
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/703 (36%), Positives = 407/703 (57%), Gaps = 38/703 (5%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQVLPT 144
++A + L+ A +VF+ +P +S +W T+I Y +I F++MV + Q P
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
++T ++ + + LS G+ +H VK+ + V V NSL++ Y GD
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--------- 181
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
LD A F + E+DVV+WNSMI G+ Q G +AL +
Sbjct: 182 ----------------------LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +K T+ LSACA + L+ G+Q+ +YI + + NA++ Y
Sbjct: 220 FKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G +E A+++ + + + + +TT+LDGY D AR + +S+ +D+VAW A++
Sbjct: 279 KCGSIEDAKRLFD--AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 385 VGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
YEQNG +A+ +F + +++ K N TL + LS + + +L+ G+ IH+ + G
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V++ALI MYSK G++ +R VFN + +++ W++MI LA HG G EA+ +F
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M E +KP+ +T+ V AC+H GLV++ + ++ M++ + I P H+A +VD+LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L++A FIE MP+ P WG+LL AC++H NL+L ++A +LL +EP N GA+ L
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ GKWE+ + +RK M+ G+KK G S ++I +H F D HP + +Y K+
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 684 KIWDEIKEMGFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ +++K G+ P+ + VL + EE++KEQ L HSEKLAI +GLIST +R++KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHS K I +L DREI+VRD RFHHF+ G CSC D+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 205/432 (47%), Gaps = 34/432 (7%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++ Y G LD AC+VF + +D VSW ++I + + G A+ +F +M + V
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ T+ VL++C + +L G++V S++ + ++ + + N++L+MY K G AK +
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M K+ +W ++ + S + AR + M ++D+V WN++I+ Y QNG EAL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F + ++K ++ TL STLSACA + L+LG+ IH+YI + V +ALI
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+K GD+ +R +F+S+ RDV W+A
Sbjct: 410 YSKC---------------------------------GDLEKSREVFNSVEKRDVFVWSA 436
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRS 441
M+ G +G +AV++F M KPN T + + S +D + + H
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G ++ + ++G + A + + T W +++ A H A
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 502 FERMLELGIKPD 513
R+LEL + D
Sbjct: 557 CTRLLELEPRND 568
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 143/273 (52%), Gaps = 33/273 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + K RN G+ V + I + +++++ L N++++ Y K SI AK++FD M K
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-V 137
+W T+L YA + A EV N MP +D V+W +I Y + G+ A+ +F E+ +
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
Q + Q T+ S L++C +G L G+ +HS++ K G+ +VT++L++MY+K GD
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
++ VF+ + +RDV W++MI G + +G
Sbjct: 418 KSREVFNSVE-------------------------------KRDVFVWSAMIGGLAMHGC 446
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
EA+ MF M +++++KP+ T + AC++
Sbjct: 447 GNEAVDMFYKM-QEANVKPNGVTFTNVFCACSH 478
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/708 (38%), Positives = 402/708 (56%), Gaps = 71/708 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN-EIGRFKNAIRMFVEMVQDQV 141
++ YAK G LD A EVF+ M RD V+W ++I ++ G + R+ V+M Q+ V
Sbjct: 158 TALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDV 216
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P T+ VL + + L GK++H F V+ G G V V +L++Y K
Sbjct: 217 SPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGK--------- 267
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM-IERDVVTWNSMIAGYSQNGYDFE 260
+D AR FD M I ++ VTW++M+ Y + E
Sbjct: 268 ----------------------CQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMRE 305
Query: 261 ALGMFAN--MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
AL +F MLKD + TLA+ + CANL L G +H Y I++ F VGN
Sbjct: 306 ALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNT 365
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+S YA K G I A R F+ + RD V
Sbjct: 366 LLSMYA---------------------------------KCGIINGAMRFFNEMDLRDAV 392
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
++TA++ GY QNG +++ + +F M G P TL+++L + LA L +G H A
Sbjct: 393 SFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYA 452
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+ G + + NALI MY+K G I+ AR+VF+ +H ++ VSW +MI+A HG+G EA
Sbjct: 453 IICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMIIAYGIHGIGLEA 511
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ LF+ M G+KPD +T++ +++AC+H GLV +G+ ++N M I P H+A MVD
Sbjct: 512 LLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVD 571
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LL RAGL +E ++FIE MPLEPDV WG+LLSACRV+KN++LG+ ++K+ + P+++G
Sbjct: 572 LLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGN 631
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDA 677
+ L N+YS+ G+W+DAA +R + K G +K+ G SW++I VH F G HPQ
Sbjct: 632 FVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQ 691
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
I NK+ ++ E+K +G+ +++ V DVEE+ KE++L +HSEKLAIAFG++S + +
Sbjct: 692 ISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHII 751
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ KNLRVC DCH+AIKFI + R+I VRDA+RFHHFK G+C+C D+W
Sbjct: 752 VTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/612 (26%), Positives = 276/612 (45%), Gaps = 116/612 (18%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
LE+ LL+S ++S++ F GKL+H ++KC LH + + +L NF
Sbjct: 9 LEYCTVLLESCIQSKSLFRGKLIHQHLLKC-LHRT--HETNLTNF--------------- 50
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR--DSVSWTTIIVTYNEIGRFKNAI 130
++P + L + Y L +A VF+ MP+R + V W +I Y G ++ AI
Sbjct: 51 DVPFEKL------VDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAI 104
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++ +M+ + P +FT VL +C+AL + S G+++H + + L V V+ +L++ Y
Sbjct: 105 DLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFY 164
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
AK G AK VFD M ++V +W NSMI+
Sbjct: 165 AKCGCLDDAKEVFDKMHKRDVVAW-------------------------------NSMIS 193
Query: 251 GYS--QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
G+S + YD E + M D S P+ T+ L A A + L+ GK+IH + +R
Sbjct: 194 GFSLHEGSYD-EVARLLVQMQNDVS--PNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRG 250
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
F VG ++ Y K ++ A++I + GI
Sbjct: 251 FVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIV-------------------------- 284
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP---NNYTLSAMLSVSSSL 425
++ V W+AM+ Y ++A+ELF ++ + TL+ ++ V ++L
Sbjct: 285 ------KNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANL 338
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
L G +H A++SG L V N L++MY+K G IN A R FN + R + VS+T++
Sbjct: 339 TDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLR-DAVSFTAI 397
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH-GGLVEQGQRYYNMMKNVH 544
I Q+G EE +++F M GI P+ T VL AC H GL +Y + +
Sbjct: 398 ISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGL------HYGSCSHCY 451
Query: 545 KI----KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
I +++D+ + G + A + M + +V+W +++ A +H
Sbjct: 452 AIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMIIAYGIH----- 505
Query: 601 GKIAAEKLLLIE 612
I E LLL +
Sbjct: 506 -GIGLEALLLFD 516
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/553 (24%), Positives = 231/553 (41%), Gaps = 127/553 (22%)
Query: 210 NVSSWNV----VVSLHIHSGRLDLARAQFDQMIER--DVVTWNSMIAGYSQNGYDFEALG 263
N+++++V +V L+I L +AR FD+M R +VV WN +I Y+ NG EA+
Sbjct: 46 NLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAID 105
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
++ ML + P++FT L AC+ L++ G++IH I R ++ V AL+ Y
Sbjct: 106 LYYKML-GYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFY 164
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G ++ A+ +FD + RDVVAW +M
Sbjct: 165 AKCGCLD---------------------------------DAKEVFDKMHKRDVVAWNSM 191
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ G+ + + D V ++ PN+ T+ +L + + SL HGK+IH +R G
Sbjct: 192 ISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF 251
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V ++ +Y K I+ ARR+F+++ + V+W++M+ A EA++LF
Sbjct: 252 VGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFC 311
Query: 504 RMLELGIKPDHITYVGVLTA----------------CTHGGLVEQGQRYYNMMKNVHKIK 547
++L L K D I V A C H ++ G M+ N
Sbjct: 312 QLLML--KDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGN----- 364
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS----------ACRVHKN 597
+++ + + G++ A F M L D V++ +++S R+
Sbjct: 365 -------TLLSMYAKCGIINGAMRFFNEMDLR-DAVSFTAIISGYVQNGNSEEGLRMFLE 416
Query: 598 LDLGKIAAEKLLL--IEP-----------DNSGAYSALC-------------NLYSSCGK 631
+ L I EK L + P S Y+ +C ++Y+ CGK
Sbjct: 417 MQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGK 476
Query: 632 WEDAANIRKSMKYVGVKKTQGFSW--VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
+ A + M G+ SW + I +H G+E L ++D +
Sbjct: 477 IDTARKVFDRMHKRGI-----VSWNTMIIAYGIHGIGLEALL-------------LFDNM 518
Query: 690 KEMGFVPDTASVL 702
+ G PD + +
Sbjct: 519 QSEGLKPDDVTFI 531
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 40/312 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H IK G L + + N+L++ YAK I+ A + F+EM ++ S+ I+S Y +
Sbjct: 344 GTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQ 403
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + +RMF+EM + P + T+ SV
Sbjct: 404 NGNSE-------------------------------EGLRMFLEMQLSGINPEKATLASV 432
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L L G H + + G + + N+L++MYAK G A+ VFD M + +
Sbjct: 433 LPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGI 492
Query: 212 SSWN-VVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
SWN ++++ IH L+ A FD M ++ D VT+ +I+ S +G E F
Sbjct: 493 VSWNTMIIAYGIHGIGLE-ALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFN 551
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M +D + P A + L + L K++H++I + + V AL+S
Sbjct: 552 AMTQDFGIIPRMEHYACMVDL---LSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVY 608
Query: 327 GGVEIAQKIVEQ 338
VE+ + + ++
Sbjct: 609 KNVELGEGVSKK 620
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 25/245 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +L S L AHL + G H I CG + N+L++ YAK
Sbjct: 424 PEKATLASVLPACAHLAGLHY-------GSCSHCYAIICGFTADTMICNALIDMYAKCGK 476
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
I A+KVFD M + + SWNT++ AY G A +F+ M + D V++ +I
Sbjct: 477 IDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISA 536
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL--SAG--KKVHSFVVKTG 175
+ G F M QD F + + + DL AG K+VHSF+ K
Sbjct: 537 CSHSGLVAEGKYWFNAMTQD------FGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMP 590
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RLKNVSSWNVVVSLHIHS--GRL-DLAR 231
L V V +LL+ + + + V + +L S+ N V+ +++S GR D A+
Sbjct: 591 LEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQ 650
Query: 232 AQFDQ 236
+F Q
Sbjct: 651 VRFTQ 655
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/827 (34%), Positives = 433/827 (52%), Gaps = 138/827 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+++H +IK GL L VF+ N+L+ Y K
Sbjct: 164 LGEVIHGMVIKMGLVLDVFVGNALVGMYGKC----------------------------- 194
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTVT 149
G +D A +VF+ MP + VSW ++I ++E G +++ + +EM+ ++ +LP TV
Sbjct: 195 --GAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVV 252
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLS-------------------------------- 177
++L C G++ G +H VK GLS
Sbjct: 253 TILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNK 312
Query: 178 ---------------GCVNVTNSLLNMYAKVGDEMMAK---------AVFDGMRLKNVSS 213
G VN +LL G+EM A A D ++L+++
Sbjct: 313 NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKE 372
Query: 214 W---------------NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
N + + G L+ A F + ++ V +WN++I G++QNG
Sbjct: 373 LHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDP 432
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
+AL + M S +PD FT++S L ACA+L+ L+ GK+IH Y++R + VG
Sbjct: 433 RKALHLLFQMTY-SGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVG-- 489
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
T+LL YI G AR +FD ++D+++V
Sbjct: 490 -------------------------------TSLLSHYIHCGKASSARVLFDRMKDKNLV 518
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W AM+ GY QNGL +++ LFR + EG + + + ++ S L++L GK+ H
Sbjct: 519 SWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV 578
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
L++ + V ++I MY+K+G I +R+VF+ + + SW ++IVA HG G+EA
Sbjct: 579 LKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIVAHGIHGHGKEA 637
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
I+L+ERM ++G PD TY+G+L AC H GLVE+G +Y+ M+N + I+P H+A ++D
Sbjct: 638 IELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLID 697
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+L RAG L +A + MP E D W SLL +CR L++G+ A+KLL +EPD +
Sbjct: 698 MLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAEN 757
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L NLY+ GKW+ +R+ MK +G++K G SW+++ +V+ F V D L P+ I
Sbjct: 758 YVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEI 817
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
++ + I E+G+ P+T+SVLH+V E+ K +LR HSEKLAI+FGL+ T + TTLRI
Sbjct: 818 RVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRI 877
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLR+C DCH+A K I K V+REIVVRD RFHHF+ GLCSC DYW
Sbjct: 878 YKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 181/387 (46%), Gaps = 69/387 (17%)
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS-LLNMYAKVGDEMMAK 200
L + + +L +C D+ G+++H FV + V N+ L+ MYA G + ++
Sbjct: 40 LQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSR 99
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
VFD M KN+ + WN++++GY++NG +
Sbjct: 100 LVFDNMETKNL-------------------------------IQWNALVSGYTRNGLYGD 128
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
+ +F +++ D+ +PD FT S + AC + ++LG+ IH +I+ VGNAL+
Sbjct: 129 VVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALV 188
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
Y K G V+ A K +FD + + ++V+W
Sbjct: 189 GMYGKCGAVDEAMK---------------------------------VFDFMPETNLVSW 215
Query: 381 TAMLVGYEQNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
+M+ + +NG ++D+ +L M+ EG P+ T+ +L V + +D G IH A+
Sbjct: 216 NSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAV 275
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+ G + + V+NA++ MYSK G +N A+ F + + + VSW +MI A + G EA
Sbjct: 276 KLGLSEEVMVNNAMVYMYSKCGYLNEAQMSF-VKNNNKNVVSWNTMISAFSLEGDVNEAF 334
Query: 500 QLFERMLELG--IKPDHITYVGVLTAC 524
L + M G +K + +T + VL AC
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPAC 361
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 410/716 (57%), Gaps = 78/716 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G+L + + RD V+W T++ + + + A+ EMV + V
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT++SVL +C+ L L GK++H++ +K G L V ++L++MY + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFDGM FD R + WN+MIAGYSQN +D EA
Sbjct: 360 VFDGM---------------------------FD----RKIGLWNAMIAGYSQNEHDKEA 388
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + L + T+A + AC + IH ++++ D V N L+
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+++G ++IA RIF + DRD+V W
Sbjct: 449 MYSRLGKIDIAM---------------------------------RIFGKMEDRDLVTWN 475
Query: 382 AMLVGYEQNGLNKDAVELFRSM------VREGP-----KPNNYTLSAMLSVSSSLASLDH 430
M+ GY + ++DA+ L M V +G KPN+ TL +L ++L++L
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GK+IHA A+++ A+ ++V +AL+ MY+K G + +R+VF+ I ++ ++W +I+A
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 594
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG G+EAI L M+ G+KP+ +T++ V AC+H G+V++G R + +MK + ++P+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV-AWGSLLSACRVHKNLDLGKIAAEKLL 609
H+A +VDLLGRAG ++EAY + MP + + AW SLL A R+H NL++G+IAA+ L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP+ + Y L N+YSS G W+ A +R++MK GV+K G SW++ ++VH F D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HPQ + + + +W+ +++ G+VPDT+ VLH+VEED KE +L HSEKLAIAFG+++
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T T +R+ KNLRVCNDCH A KFI K+VDREI++RD RFH FK G CSC DYW
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 153/609 (25%), Positives = 277/609 (45%), Gaps = 93/609 (15%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
SP E++ LL+S ++S L + +I G+ + +L+ A + + K++
Sbjct: 61 SP-EWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 71 FDEM-----PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+ V ++ NT+++ Y K G +VF+ + R+ VSW ++I + +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG---DLSAGKKVHSFVVKTGLSGCVNV 182
++ A+ F M+ + V P+ FT+ SV+ +C+ L L GK+VH++ ++ G +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-I 238
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N+L+ MY K+G +K V L GR D+
Sbjct: 239 INTLVAMYGKLGKLASSK-----------------VLLGSFGGR--------------DL 267
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
VTWN++++ QN EAL M+ + ++PD+FT++S L AC++LE L+ GK++HA
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 303 YIIRT-EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y ++ D VG+AL+ D Y
Sbjct: 327 YALKNGSLDENSFVGSALV---------------------------------DMYCNCKQ 353
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLS 420
+ RR+FD + DR + W AM+ GY QN +K+A+ LF M G N+ T++ ++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ + IH ++ G V N L+ MYS+ G I+ A R+F + R + V
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLV 472
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLEL-----------GIKPDHITYVGVLTACTHGGL 529
+W +MI E+A+ L +M L +KP+ IT + +L +C
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 530 VEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+ +G+ + +KN + + +++VD+ + G LQ + + +P + +V+ W +
Sbjct: 533 LAKGKEIHAYAIKN--NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589
Query: 589 LSACRVHKN 597
+ A +H N
Sbjct: 590 IMAYGMHGN 598
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 27/284 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H ++K GL F++N+LM+ Y++ I A ++F +M + L +WNT+++ Y
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 95 LDLACEVFNLMPNRD-SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+ A + + M N + VS K A R+ ++ P T+ ++L
Sbjct: 487 HEDALLLLHKMQNLERKVS--------------KGASRVSLK-------PNSITLMTILP 525
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC AL L+ GK++H++ +K L+ V V ++L++MYAK G M++ VFD + KNV +
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 214 WNVVVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
WNV++ + G +DL R Q ++ + VT+ S+ A S +G E L +F M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
D ++P A + ++K Q+ + R +F+ G
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR-DFNKAG 688
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 15/261 (5%)
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A IF S + R W +L ++ L ++AV + M+ G KP+NY A+L
Sbjct: 48 VSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 422 SSSLASLDHGKQIHASALRSGEA-SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L ++ GKQIHA + G S++V+N L+ +Y K G+ A +VF+ I R + V
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ-V 165
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SW S+I +L E A++ F ML+ ++P T V V+TAC++ + E M
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG----LMMG 221
Query: 541 KNVHKIKPTPSHFAS-----MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CRV 594
K VH S +V + G+ G L + + + D+V W ++LS+ C+
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQN 280
Query: 595 HKNLDLGKIAAEKLLL-IEPD 614
+ L+ + E +L +EPD
Sbjct: 281 EQLLEALEYLREMVLEGVEPD 301
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA IK L V + ++L++ YAK + ++KVFD++P K + +WN I+ AY
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G A ++ +M PN V++ ++ + G +R+F M D
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNE--VTFISVFAACSHSGMVDEGLRIFYVMKPD 647
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 410/716 (57%), Gaps = 78/716 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G+L + + RD V+W T++ + + + A+ EMV + V
Sbjct: 153 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 212
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT++SVL +C+ L L GK++H++ +K G L V ++L++MY K
Sbjct: 213 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN------CKQ 266
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
V G R+ FD M +R + WN+MIAGYSQN +D EA
Sbjct: 267 VLSGRRV-------------------------FDGMFDRKIGLWNAMIAGYSQNEHDKEA 301
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + L + T+A + AC + IH ++++ D V N L+
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 361
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+++G ++IA RIF + DRD+V W
Sbjct: 362 MYSRLGKIDIAM---------------------------------RIFGKMEDRDLVTWN 388
Query: 382 AMLVGYEQNGLNKDAVELFRSM------VREGP-----KPNNYTLSAMLSVSSSLASLDH 430
M+ GY + ++DA+ L M V +G KPN+ TL +L ++L++L
Sbjct: 389 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 448
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GK+IHA A+++ A+ ++V +AL+ MY+K G + +R+VF+ I ++ ++W +I+A
Sbjct: 449 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 507
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG G+EAI L M+ G+KP+ +T++ V AC+H G+V++G R + +MK + ++P+
Sbjct: 508 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 567
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV-AWGSLLSACRVHKNLDLGKIAAEKLL 609
H+A +VDLLGRAG ++EAY + MP + + AW SLL A R+H NL++G+IAA+ L+
Sbjct: 568 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 627
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP+ + Y L N+YSS G W+ A +R++MK GV+K G SW++ ++VH F D
Sbjct: 628 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 687
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HPQ + + + +W+ +++ G+VPDT+ VLH+VEED KE +L HSEKLAIAFG+++
Sbjct: 688 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 747
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T T +R+ KNLRVCNDCH A KFI K+VDREI++RD RFH FK G CSC DYW
Sbjct: 748 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 151/600 (25%), Positives = 264/600 (44%), Gaps = 119/600 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-SVFLKNSLMNFYAKTESISYAKKVFDEM 74
+ LL++ ++ +GK +HA + K G + SV + N+L+N Y K KVFD +
Sbjct: 13 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 72
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+ SWN+++S+ + ++A E F
Sbjct: 73 SERNQVSWNSLISSLCSFEKWEMALEAFRC------------------------------ 102
Query: 135 EMVQDQVLPTQFTVTSVLASCTALG---DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
M+ + V P+ FT+ SV+ +C+ L L GK+VH++ ++ G + N+L+ MY
Sbjct: 103 -MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYG 160
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K+G +K V L GR D+VTWN++++
Sbjct: 161 KLGKLASSK-----------------VLLGSFGGR--------------DLVTWNTVLSS 189
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFD 310
QN EAL M+ + ++PD+FT++S L AC++LE L+ GK++HAY ++ D
Sbjct: 190 LCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 248
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
VG+AL+ D Y + RR+FD
Sbjct: 249 ENSFVGSALV---------------------------------DMYCNCKQVLSGRRVFD 275
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLD 429
+ DR + W AM+ GY QN +K+A+ LF M G N+ T++ ++ +
Sbjct: 276 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 335
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
+ IH ++ G V N L+ MYS+ G I+ A R+F + R + V+W +MI
Sbjct: 336 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGY 394
Query: 490 AQHGLGEEAIQLFERMLEL-----------GIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
E+A+ L +M L +KP+ IT + +L +C + +G+ +
Sbjct: 395 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 454
Query: 539 M-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+KN + + +++VD+ + G LQ + + +P + +V+ W ++ A +H N
Sbjct: 455 YAIKN--NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 210/464 (45%), Gaps = 79/464 (17%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVG 194
M+ + P + ++L + L D+ GK++H+ V K G V V N+L+N+Y K G
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
D AV+ FD++ ER+ V+WNS+I+
Sbjct: 61 D---FGAVYK----------------------------VFDRISERNQVSWNSLISSLCS 89
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL---EKLKLGKQIHAYIIRTEFDA 311
AL F ML D +++P FTL S ++AC+NL E L +GKQ+HAY +R
Sbjct: 90 FEKWEMALEAFRCML-DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK---- 144
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
LN TL+ Y K+G + ++ + S
Sbjct: 145 ------------------------------GELNSFIINTLVAMYGKLGKLASSKVLLGS 174
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
RD+V W +L QN +A+E R MV EG +P+ +T+S++L S L L G
Sbjct: 175 FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 234
Query: 432 KQIHASALRSGEASSLS-VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
K++HA AL++G S V +AL+ MY + + RRVF+ + R+ + W +MI +
Sbjct: 235 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGYS 293
Query: 491 QHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM--KNVHKIK 547
Q+ +EA+ LF M E G+ + T GV+ AC G + + + + + + + +
Sbjct: 294 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 353
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ M LG+ + + +E + D+V W ++++
Sbjct: 354 FVQNTLMDMYSRLGKIDIAMRIFGKME----DRDLVTWNTMITG 393
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 27/284 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H ++K GL F++N+LM+ Y++ I A ++F +M + L +WNT+++ Y
Sbjct: 340 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 399
Query: 95 LDLACEVFNLMPNRD-SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+ A + + M N + VS K A R+ ++ P T+ ++L
Sbjct: 400 HEDALLLLHKMQNLERKVS--------------KGASRVSLK-------PNSITLMTILP 438
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC AL L+ GK++H++ +K L+ V V ++L++MYAK G M++ VFD + KNV +
Sbjct: 439 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 498
Query: 214 WNVVVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
WNV++ + G +DL R Q ++ + VT+ S+ A S +G E L +F M
Sbjct: 499 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 558
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
D ++P A + ++K Q+ + R +F+ G
Sbjct: 559 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR-DFNKAG 601
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 14/220 (6%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA-SSLSVSNALITMYSKAG 461
M+ G KP+NY A+L + L ++ GKQIHA + G S++V+N L+ +Y K G
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
+ A +VF+ I R + VSW S+I +L E A++ F ML+ ++P T V V+
Sbjct: 61 DFGAVYKVFDRISERNQ-VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 119
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS-----MVDLLGRAGLLQEAYNFIENM 576
TAC++ + E M K VH S +V + G+ G L + + +
Sbjct: 120 TACSNLPMPEG----LMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF 175
Query: 577 PLEPDVVAWGSLLSA-CRVHKNLDLGKIAAEKLLL-IEPD 614
D+V W ++LS+ C+ + L+ + E +L +EPD
Sbjct: 176 G-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 214
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA IK L V + ++L++ YAK + ++KVFD++P K + +WN I+ AY
Sbjct: 449 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 508
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G A ++ +M PN V++ ++ + G +R+F M D
Sbjct: 509 HGNGQEAIDLLRMMMVQGVKPNE--VTFISVFAACSHSGMVDEGLRIFYVMKPD 560
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 278/781 (35%), Positives = 422/781 (54%), Gaps = 103/781 (13%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
PP L + + LL+ + G+ VHA++ G+ +L N YAK +
Sbjct: 56 PPVLRT----FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPA 111
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A++VFD MP RD V+W ++ Y G
Sbjct: 112 DARRVFDR-------------------------------MPVRDRVAWNALVAGYARNGL 140
Query: 126 FKNAIRMFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
+ A+ M V M +++ P T+ SVL +C L+A ++ H+F +++GL VNV
Sbjct: 141 ARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVAT 200
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
++L+ Y K GD A+ VFD W M ++ V+
Sbjct: 201 AILDAYCKCGDIRAARVVFD---------W----------------------MPTKNSVS 229
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
WN+MI GY+QNG EAL +F M+++ D LA+ L AC L L G ++H +
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA-LQACGELGCLDEGMRVHELL 288
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R D+ V NALI+ Y+K V++A
Sbjct: 289 VRIGLDSNVSVMNALITMYSKCKRVDLAS------------------------------- 317
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
+FD L R V+W AM++G QNG ++DAV LF M E KP+++TL +++ +
Sbjct: 318 --HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD 375
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++ + IH ++R + V ALI MY+K G +N AR +FN R ++W +
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERH-VITWNA 434
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI HG G+ A++LFE M +GI P+ T++ VL+AC+H GLV++G+ Y+ MK +
Sbjct: 435 MIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDY 494
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
++P H+ +MVDLLGRAG L EA+ FI+ MP++P + +G++L AC++HKN++L + +
Sbjct: 495 GLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEES 554
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
A+K+ + P + L N+Y++ W+D A +R +M+ G++KT G+S +Q++N++H
Sbjct: 555 AQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHT 614
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F H Q IY+++AK+ +EIK +G+VPDT S+ HDVE+DVK Q+L HSEKLAIA
Sbjct: 615 FYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIA 673
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
FGLI T TT++I KNLRVCNDCH+A K I + REI++RD RFHHFK G CSC DY
Sbjct: 674 FGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDY 733
Query: 785 W 785
W
Sbjct: 734 W 734
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 216/478 (45%), Gaps = 70/478 (14%)
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ FV M P T TS+L C A GDL+ G+ VH+ + G+ +L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK R AR FD+M RD V WN++
Sbjct: 103 MYAKCR-------------------------------RPADARRVFDRMPVRDRVAWNAL 131
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
+AGY++NG A+ M M ++ +PD TL S L ACAN L ++ HA+ IR+
Sbjct: 132 VAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSG 191
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ V A++ Y K G DI AR +
Sbjct: 192 LEELVNVATAILDAYCKCG---------------------------------DIRAARVV 218
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
FD + ++ V+W AM+ GY QNG +++A+ LF MV EG + ++ A L L L
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
D G ++H +R G S++SV NALITMYSK ++ A VF+ + R+ VSW +MI+
Sbjct: 279 DEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-RRTQVSWNAMILG 337
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQ+G E+A++LF RM +KPD T V V+ A Q + + +H +
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQ 396
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+++D+ + G + A + N E V+ W +++ H GK A E
Sbjct: 397 DVYVLTALIDMYAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSHG---FGKAAVE 450
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/713 (36%), Positives = 410/713 (57%), Gaps = 70/713 (9%)
Query: 79 LCSWNTILSAYAK-QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+C +++ + K + + A +VF+ M + V+WT +I ++G + AIR F++MV
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+FT++SV ++C L +LS GK++HS+ +++GL +V SL++MYAK +
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSAD- 318
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN-G 256
G +D R FD+M + V++W ++I GY +N
Sbjct: 319 ---------------------------GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
EA+ +F+ M+ ++P+ FT +S AC NL ++GKQ+ + + V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N++IS + K +E AQ R F+SL +++
Sbjct: 412 NSVISMFVKSDRMEDAQ---------------------------------RAFESLSEKN 438
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+V++ L G +N + A +L + + +T +++LS +++ S+ G+QIH+
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
++ G + + V NALI+MYSK G+I+ A RVFN + R +SWTSMI A+HG
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN-VISWTSMITGFAKHGFAI 557
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
++ F +M+E G+KP+ +TYV +L+AC+H GLV +G R++N M HKIKP H+A M
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAGLL +A+ FI MP + DV+ W + L ACRVH N +LGK+AA K+L ++P+
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
AY L N+Y+ GKWE++ +R+ MK + K G SW+++ +K+H F V D HP
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDV----EEDVKEQMLRHHSEKLAIAFGLISTPE 732
IY+++ ++ EIK G+VPDT VLH + +E KE++L HSEK+A+AFGLIST +
Sbjct: 738 QIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK 797
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +R+ KNLRVC DCH+A+K+I + REIV+RD RFHHFK G CSC DYW
Sbjct: 798 SRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 159/595 (26%), Positives = 277/595 (46%), Gaps = 107/595 (17%)
Query: 10 ISPLE--FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
I P++ ++ LL+S +++R+ +GKLVHAR+I+ + L NSL++ Y+K+ + A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+ VF E RD VSW+ ++ Y GR
Sbjct: 117 EDVF----------------------------ETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSL 186
+AI++FVE ++ ++P + T+V+ +C+ + G+ F++KTG V V SL
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 187 LNMYAKVGDEMMAKA--VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
++M+ K G+ A VFD M E +VVT
Sbjct: 209 IDMFVK-GENSFENAYKVFDKMS-------------------------------ELNVVT 236
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W MI Q G+ EA+ F +M+ S + DKFTL+S SACA LE L LGKQ+H++
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
IR+ V +L+ YAK DG +
Sbjct: 296 IRSGL--VDDVECSLVDMYAKCSA-------------------------DG-----SVDD 323
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQN-GLNKDAVELFRSMVREGP-KPNNYTLSAMLSVS 422
R++FD + D V++WTA++ GY +N L +A+ LF M+ +G +PN++T S+
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+L+ GKQ+ A + G AS+ SV+N++I+M+ K+ + A+R F + + VS+
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSY 442
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+ + ++ E+A +L + E + T+ +L+ + G + +G++ ++ +
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 543 VHKI--KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ +P + SM G +NF+EN +V++W S+++ H
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKH 553
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 227/487 (46%), Gaps = 76/487 (15%)
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ-FTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I+ + G + A+ M +D + P T +S+L SC D GK VH+ +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+ + NSL+++Y+K GD A+ VF+ MR
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR--------------------------- 124
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
+ +RDVV+W++M+A Y NG + +A+ +F L + L P+ + + + AC+N + +
Sbjct: 125 -RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDFV 182
Query: 295 KLGKQIHAYIIRT-EFDATGPVGNALISCYAK-VGGVEIAQKIVEQSGISYLNVIAFTTL 352
+G+ ++++T F++ VG +LI + K E A K+ ++ +S LNV
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK--MSELNV------ 234
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
V WT M+ Q G ++A+ F MV G + +
Sbjct: 235 -------------------------VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRV 469
+TLS++ S + L +L GKQ+H+ A+RSG + S L+ MY+K G+++ R+V
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKV 327
Query: 470 FNLIHWRQETVSWTSMIVALAQH-GLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHG 527
F+ + +SWT++I ++ L EAI LF M+ G ++P+H T+ AC +
Sbjct: 328 FDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G++ + S S++ + ++ +++A E++ E ++V++ +
Sbjct: 387 SDPRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNT 444
Query: 588 LLSA-CR 593
L CR
Sbjct: 445 FLDGTCR 451
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 48/376 (12%)
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D D T +S L +C +LGK +HA +I + + + N+LIS Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR---DRDVVAWTAML 384
D A +F+++R RDVV+W+AM+
Sbjct: 112 ---------------------------------DSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE- 443
Y NG DA+++F + G PN+Y +A++ S+ + G+ +++G
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 444 ASSLSVSNALITMYSKAGN-INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + V +LI M+ K N A +VF+ + V+WT MI Q G EAI+ F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M+ G + D T V +AC + G++ ++ + M
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSA 317
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL----IEPDNSGA 618
G + + + M + V++W +L++ + NL I ++ +EP++
Sbjct: 318 DGSVDDCRKVFDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 619 YSALCNLYSSCGKWED 634
SA + +CG D
Sbjct: 377 SSA----FKACGNLSD 388
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 35/253 (13%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P VGK V + K GL + + NS+++ + K++ + A++ F+ + K L S+NT
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF-- 445
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
LD C N F+ A ++ E+ + ++ + FT
Sbjct: 446 -------LDGTCRNLN----------------------FEQAFKLLSEITERELGVSAFT 476
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
S+L+ +G + G+++HS VVK GLS V N+L++MY+K G A VF+ M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALG 263
+NV SW +++ G F+QMIE V VT+ ++++ S G E
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 264 MFANMLKDSSLKP 276
F +M +D +KP
Sbjct: 597 HFNSMYEDHKIKP 609
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 28/145 (19%)
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IE 612
S +DL+ R G+ P+ D V + SLL +C ++ LGK+ +L+ IE
Sbjct: 47 SALDLMARDGI----------RPM--DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE 94
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
PD S Y++L +LYS G A ++ ++M+ G K SW + G E
Sbjct: 95 PD-SVLYNSLISLYSKSGDSAKAEDVFETMRRFG--KRDVVSWSAMMACYGNNGRE---- 147
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPD 697
DAI K++ E E+G VP+
Sbjct: 148 --LDAI-----KVFVEFLELGLVPN 165
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/679 (39%), Positives = 391/679 (57%), Gaps = 58/679 (8%)
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSV---LASCTALGDLSAGKKV 167
SW I G F +AI +F+ M D +TS+ L SC ALG + G +
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H+ +++G N+LLN+Y K+ DG + VV L
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDG---------SAVV--------L 123
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+ R FD+M E+DVV+WN+++ G +++G EALG+ M +D KPD FTL+S L
Sbjct: 124 ESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGC-KPDSFTLSSVLPI 182
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
A ++ G ++H + R F VG++LI YA + + K+
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKV------------ 230
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
FD+L RD + W +ML G QNG +A+ LFR M+ G
Sbjct: 231 ---------------------FDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSG 269
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
KP T S+++ +LASL GKQ+HA +R G ++ +S++LI MY K GN++ AR
Sbjct: 270 IKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIAR 329
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTH 526
R+F+ I + VSWT+MI+ A HG EA+ LF+RM ELG +KP+HIT++ VLTAC+H
Sbjct: 330 RIFDRIQ-SPDIVSWTAMIMGHALHGPAREALVLFDRM-ELGNLKPNHITFLAVLTACSH 387
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
GLV++G +Y+N M + + I P+ H A++ D LGR G L+EAYNFI M ++P W
Sbjct: 388 AGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWS 447
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LL AC+VHKN L + A+K+ +EP + G++ L N YSS G+W +AA++RKSM+ G
Sbjct: 448 TLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKG 507
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
++K SW++++NK HVF D HP + I + + +++ G+VP+T V D+E
Sbjct: 508 MQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIE 567
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E+ K +L HSEKLAI FG+ISTP TT+R+MKNLRVC DCH+ KFI K+V REIV+R
Sbjct: 568 EEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIVGREIVMR 627
Query: 767 DATRFHHFKKGLCSCRDYW 785
DA RFHHFK G+CSC D+W
Sbjct: 628 DANRFHHFKDGICSCGDFW 646
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 210/478 (43%), Gaps = 87/478 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G +HA ++ G F N+L+N Y K + D V +L +
Sbjct: 76 LGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAV--------VLESVR 127
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K VF+ MP +D VSW T+++ E GR A+ + EM +D P FT++S
Sbjct: 128 K---------VFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSS 178
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL D+ G ++H F + G V V +SL++MYA + VFD + +++
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
W NSM+AG +QNG EALG+F ML
Sbjct: 239 AILW-------------------------------NSMLAGCAQNGSVDEALGLFRRMLH 267
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S +KP T +S + AC NL L LGKQ+HAY+IR FD + ++LI Y K G V
Sbjct: 268 -SGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVS 326
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
IA+ RIFD ++ D+V+WTAM++G+ +
Sbjct: 327 IAR---------------------------------RIFDRIQSPDIVSWTAMIMGHALH 353
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSV 449
G ++A+ LF M KPN+ T A+L+ S +D G K ++ + G SL
Sbjct: 354 GPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEH 413
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE-AIQLFE 503
AL + G + A + + + W++++ A H L EE A ++F+
Sbjct: 414 HAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFD 471
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 45/333 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++++ YA R D + +VF+ +P RD++ W +++ + G A+ +F M+ +
Sbjct: 212 SSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIK 271
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T +S++ +C L L GK++H++V++ G G V +++SL++MY K G+ +A+ +
Sbjct: 272 PMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRI 331
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD ++ ++ SW +MI G++ +G EAL
Sbjct: 332 FDRIQSPDIVSW-------------------------------TAMIMGHALHGPAREAL 360
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN----- 317
+F M + +LKP+ T + L+AC++ + G + + D G V +
Sbjct: 361 VLFDRM-ELGNLKPNHITFLAVLTACSHAGLVDKGWK----YFNSMSDHYGIVPSLEHHA 415
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI---GPARRIFDSLRD 374
AL + G +E A + I + T L + + A++IFD L
Sbjct: 416 ALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFD-LEP 474
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
R + + + Y +G +A L +SM ++G
Sbjct: 475 RSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKG 507
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 15/211 (7%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+GK +HA +I+ G +VF+ +SL++ Y K ++S A+++FD + + SW ++ +
Sbjct: 291 LLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGH 350
Query: 90 AKQGRLDLACEVF------NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
A G A +F NL PN +++ ++ + G + F M +
Sbjct: 351 ALHGPAREALVLFDRMELGNLKPNH--ITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIV 408
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA----KVGDEMMA 199
+ LA LG ++ ++F+ + +V ++LL V E +A
Sbjct: 409 PSLEHHAALAD--TLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVA 466
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
K +FD + +++ S ++ + + SGR + A
Sbjct: 467 KKIFD-LEPRSMGSHIILSNTYSSSGRWNEA 496
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/676 (39%), Positives = 389/676 (57%), Gaps = 51/676 (7%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF--TVTSVLASCTALGDLSAGKKVHSF 170
W I G F +A+ +F+ M + ++ + L SC ALG + G +H+
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
+++G N+LLN+Y KV + S+ +V + S +
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLD------------STGVAIVDVPGSSTAFESV 123
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD+MIERDVV+WN+++ G ++ G EALG M ++ +PD FTL++ L A
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREG-FRPDSFTLSTVLPIFAE 182
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+K G ++H + R FD+ VG++LI YA + + K+
Sbjct: 183 CADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKV--------------- 227
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
FD+L RD + W ++L G QNG ++A+ +FR M++ G +P
Sbjct: 228 ------------------FDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRP 269
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
T S+++ V +LASL GKQ+HA + G ++ +S++LI MY K G I+ A +F
Sbjct: 270 VPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIF 329
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGL 529
+ + + VSWT+MI+ A HG EA+ LFERM ELG KP+HIT++ VLTAC+H GL
Sbjct: 330 DKMS-SPDVVSWTAMIMGYALHGPAREALVLFERM-ELGNAKPNHITFLAVLTACSHAGL 387
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
V++G +Y+ M N + I PT HFA++ D LGRAG L EAYNFI M ++P W +LL
Sbjct: 388 VDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLL 447
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
ACRVHKN L + A+K++ +EP + G++ L N+YS+ G+W +AA++R+SM+ G+KK
Sbjct: 448 RACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKK 507
Query: 650 TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
SW+++++K+HVF D HP D I + + +++ G VP+T V D+EE+
Sbjct: 508 DPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEH 567
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
K +L HSEKLAI FG+ISTP T +R+MKNLRVC DCH+ KFI KL DREIVVRDA
Sbjct: 568 KSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDAN 627
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHFK G CSC D+W
Sbjct: 628 RFHHFKDGNCSCGDFW 643
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 218/504 (43%), Gaps = 85/504 (16%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
P SL + L+ A L S L G +HA I+ G F N+L+N Y K S
Sbjct: 50 PASLPAALKSCAALGLSAL-------GASLHALAIRSGAFADRFTANALLNLYCKV-PCS 101
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
Y D V I+ + +VF+ M RD VSW T+++ E GR
Sbjct: 102 Y----LDSTGV-------AIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGR 150
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
A+ +M ++ P FT+++VL D+ G +VH F + G V V +S
Sbjct: 151 HHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSS 210
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYA R D + FD + RD + W
Sbjct: 211 LIDMYANC-------------------------------TRTDYSVKVFDNLPVRDHILW 239
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
NS++AG +QNG EALG+F ML+ + ++P T +S + C NL L+ GKQ+HAY+I
Sbjct: 240 NSLLAGCAQNGSVEEALGIFRRMLQ-AGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVI 298
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
F+ + ++LI Y K G + IA I ++ +S +V+++
Sbjct: 299 CGGFEDNVFISSSLIDMYCKCGEISIAHCIFDK--MSSPDVVSW---------------- 340
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
TAM++GY +G ++A+ LF M KPN+ T A+L+ S
Sbjct: 341 ---------------TAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHA 385
Query: 426 ASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+D G K + + G +L AL +AG ++ A + + + W++
Sbjct: 386 GLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWST 445
Query: 485 MIVALAQHGLGEEAIQLFERMLEL 508
++ A H A ++ ++++EL
Sbjct: 446 LLRACRVHKNTMLAEEVAKKIMEL 469
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA +I G +VF+ +SL++ Y K IS A +FD+M + SW ++ YA
Sbjct: 290 GKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYAL 349
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPT 144
G A +F M PN +++ ++ + G + F M ++P
Sbjct: 350 HGPAREALVLFERMELGNAKPNH--ITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVP- 406
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T+ A LG + ++F+ K + +V ++LL + M+A+ V
Sbjct: 407 --TLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAK 464
Query: 205 G---MRLKNVSSWNVVVSLHIHSGRLDLA 230
+ +++ S V+ +++ SGR + A
Sbjct: 465 KIMELEPRSIGSHVVLSNMYSASGRWNEA 493
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/710 (37%), Positives = 405/710 (57%), Gaps = 72/710 (10%)
Query: 81 SWNT-----ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
SWN +++ YAK +++ A +F+ MP RD V W T+I Y + G K A+ + +
Sbjct: 62 SWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLR 121
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++ P T+ S+L + L G VH +V++ G VNV+ +L++MY+K G
Sbjct: 122 MSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGS 181
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +AR FD M R VV+WNSMI GY Q+
Sbjct: 182 -------------------------------VSIARVIFDGMDHRTVVSWNSMIDGYVQS 210
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G A+ +F ML D ++P T+ L ACA+L L+ GK +H + + + D+ V
Sbjct: 211 GDAEGAMLIFQKML-DEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LIS Y+K V+IA I F +LR++
Sbjct: 270 MNSLISMYSKCKRVDIAADI---------------------------------FKNLRNK 296
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+V+W AM++GY QNG +A+ F M KP+++T+ +++ + L+ K IH
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+R ++ V AL+ MY+K G I+ AR++F++++ R ++W +MI HGLG
Sbjct: 357 GLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARH-VITWNAMIDGYGTHGLG 415
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+ +++LF+ M + IKP+ IT++ L+AC+H GLVE+G ++ MK + I+PT H+ +
Sbjct: 416 KTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGA 475
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDLLGRAG L +A++FI+ MP++P + +G++L AC++HKN+DLG+ AA ++ + PD+
Sbjct: 476 MVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDD 535
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G + L N+Y++ W A +R M+ G++KT G S V+I N+VH F HPQ
Sbjct: 536 GGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQS 595
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY+ + + DEI+ G+VPDT S+ HDVE+DVK Q+L HSEKLAIAFGL++T T
Sbjct: 596 KKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTP 654
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ I KNLRVC DCH+A K+I + REI+VRD RFH FK G+CSC DYW
Sbjct: 655 IHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 201/472 (42%), Gaps = 100/472 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G VH +++ G V + +L++ Y+K S+S A+ +FD M +T+ SWN+++ Y
Sbjct: 149 IGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYV 208
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + A+ +F +M+ + V PT TV
Sbjct: 209 QSGDAE-------------------------------GAMLIFQKMLDEGVQPTNVTVMG 237
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L +C LGDL GK VH V + L V+V NSL++MY+K +A +F +R K
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT 297
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ SW N+MI GY+QNG EAL F M +
Sbjct: 298 LVSW-------------------------------NAMILGYAQNGCVNEALNAFCEM-Q 325
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
++KPD FT+ S + A A L + K IH +IR D V AL+ YAK G +
Sbjct: 326 SRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIH 385
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A+K +FD + R V+ W AM+ GY +
Sbjct: 386 TARK---------------------------------LFDMMNARHVITWNAMIDGYGTH 412
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
GL K +VELF+ M + KPN+ T LS S ++ G S + G ++
Sbjct: 413 GLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDH 472
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEA 498
A++ + +AG +N A + + + +M+ A H LGE+A
Sbjct: 473 YGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKA 524
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 39/297 (13%)
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
ML GY ++ A+ F M + +P Y + +L + + L GK+IH S + SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ +L ++ MY+K IN A +F+ + R + V W +MI AQ+G + A+ L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPER-DLVCWNTMISGYAQNGFAKVALMLV 119
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
RM E G +PD IT V +L A L+ G + + + + ++VD+ +
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRA-GFESLVNVSTALVDMYSK 178
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSL---------------------------------- 588
G + A + M VV+W S+
Sbjct: 179 CGSVSIARVIFDGMD-HRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMG 237
Query: 589 -LSACRVHKNLDLGKIAAEKLLLIEPDNS-GAYSALCNLYSSCGKWEDAANIRKSMK 643
L AC +L+ GK + + ++ D+ ++L ++YS C + + AA+I K+++
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR 294
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 31/136 (22%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P K +H +I+ L +VF+ +L++ YAK +I A+K+FD M + + +WN ++
Sbjct: 349 PRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDG 408
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y G +G K ++ +F EM + + P T
Sbjct: 409 YGTHG-----------------------------LG--KTSVELFKEMKKGTIKPNDITF 437
Query: 149 TSVLASCTALGDLSAG 164
L++C+ G + G
Sbjct: 438 LCALSACSHSGLVEEG 453
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/767 (35%), Positives = 430/767 (56%), Gaps = 96/767 (12%)
Query: 20 LQSNLKSRNPFVGKLVHARIIKCGLHL-SVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LQS ++ + +G+ +HAR++ G S FL N L+ Y+ + A ++FD
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDA----- 78
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
MP + VSWTT++ + ++A+ F M +
Sbjct: 79 --------------------------MPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCR 112
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
++PTQF ++S + AL AG ++H V+ G + V ++L +MY+K G
Sbjct: 113 AGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSG---- 168
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
L + + R+ FDQM ++D V W +MI GY++NG
Sbjct: 169 ---------------------LLVEACRV------FDQMPQKDAVAWTAMIDGYAKNGNL 201
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
A+ F +M ++ + D+ L S LSA L+ L + IH+ ++++ F+ V NA
Sbjct: 202 EAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNA 261
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L YAK ++ A ++V+ S LNV++ T+L+DGYI+ I
Sbjct: 262 LTDMYAKAADMDNAARVVKIDQGS-LNVVSATSLIDGYIETDCI---------------- 304
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+ A+ +F + R+G +PN +T S+M+ + A L+ G Q+HA
Sbjct: 305 ---------------EKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEV 349
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+++ S VS+ L+ MY K G I+ + ++F I + + ++W + I LAQHG G EA
Sbjct: 350 IKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTD-IAWNAAINVLAQHGHGREA 408
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
I+ F+RM GI+P+HIT+V +LTAC+H GLV++G +Y+ MK+ H I+P H++ ++D
Sbjct: 409 IRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIID 468
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+ GRAG L EA FI MP++P+ W SLL ACR+ N +LG+IAA+ ++ +EPDN+G
Sbjct: 469 MYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGV 528
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
+ +L +Y+S G+WED +RK M+ +KK GFSWV K HVFG EDW HPQ++ I
Sbjct: 529 HVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKI 588
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y K+ ++++ IKE G+VPDT + ++E+ K+++LR+HSE++A+AF LIS P + +
Sbjct: 589 YEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPIIV 648
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLR+C DCHSA+KFI K+ +R+I+VRD +RFHHF KG CSC DYW
Sbjct: 649 KKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 144/326 (44%), Gaps = 67/326 (20%)
Query: 18 HLLQSNLKS----RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
H+L S L + ++ ++ + +H+ ++K G V ++N+L + YAK + A +V
Sbjct: 222 HVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARV--- 278
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
VK QG L++ VS T++I Y E + A+ MF
Sbjct: 279 --VKI------------DQGSLNV-------------VSATSLIDGYIETDCIEKALLMF 311
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+E+ + V P +FT +S++ C L G ++H+ V+KT L V+++LL+MY K
Sbjct: 312 IELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKC 371
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G ++SL I F ++ + WN+ I +
Sbjct: 372 G----------------------LISLSIQ---------LFKEIEYHTDIAWNAAINVLA 400
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG-KQIHAYIIRTEFDAT 312
Q+G+ EA+ F M S ++P+ T S L+AC++ + G K ++ +
Sbjct: 401 QHGHGREAIRAFDRM-TSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPK 459
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQ 338
G + +I Y + G ++ A+K + +
Sbjct: 460 GEHYSCIIDMYGRAGRLDEAEKFIGE 485
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/783 (35%), Positives = 420/783 (53%), Gaps = 100/783 (12%)
Query: 5 NPPSLISP-LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
+P S P L + LL+ + G+ VHA++ GL +L N YAK
Sbjct: 216 SPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRR 275
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
A++VFD MP RD V+W ++ Y
Sbjct: 276 PGDARRVFDR-------------------------------MPARDRVAWNALVAGYARN 304
Query: 124 GRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G + A+ M V M + D P T+ SVL +C L A ++VH+F V+ G VNV
Sbjct: 305 GLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNV 364
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ ++L++Y K G +D AR FD M +R+
Sbjct: 365 STAILDVYCKCG-------------------------------AVDSARKVFDGMQDRNS 393
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V+WN+MI GY++NG EAL +F M+ + D LA+ L AC L L G+++H
Sbjct: 394 VSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAA-LHACGELGFLDEGRRVHE 452
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++R ++ V NALI+ Y K ++A ++
Sbjct: 453 LLVRIGLESNVNVMNALITMYCKCKRTDLAAQV--------------------------- 485
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
FD L + V+W AM++G QNG ++DAV LF M E KP+++TL +++
Sbjct: 486 ------FDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPAL 539
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ ++ + IH ++R + V ALI MY+K G ++ AR +FN R ++W
Sbjct: 540 ADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRH-VITW 598
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+MI HG G+ A++LFE M G P+ T++ VL+AC+H GLV++GQ Y++ MK
Sbjct: 599 NAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKE 658
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ ++P H+ +MVDLLGRAG L EA++FI+ MP+EP + +G++L AC++HKN++L +
Sbjct: 659 DYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAE 718
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+A+++ +EP+ + L N+Y++ W+D A +R +M+ G++KT G+S VQ++N++
Sbjct: 719 ESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEI 778
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F H Q IY ++AK+ +EIK +G+VPDT S+ HDVE+DVK Q+L HSEKLA
Sbjct: 779 HTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLA 837
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
IA+GLI T TT++I KNLRVC DCH+A K I + REI++RD RFHHFK G CSC
Sbjct: 838 IAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCG 897
Query: 783 DYW 785
DYW
Sbjct: 898 DYW 900
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 35/284 (12%)
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL FA M S P T S L CA L G+ +HA + A G AL
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHA-----QLAARGLSPEAL- 261
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
A T L + Y K G ARR+FD + RD VAW
Sbjct: 262 ---------------------------AATALANMYAKCRRPGDARRVFDRMPARDRVAW 294
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
A++ GY +NGL + AV + M E G +P+ TL ++L + +L +++HA A+
Sbjct: 295 NALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAV 354
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
R G ++VS A++ +Y K G +++AR+VF+ + R +VSW +MI A++G EA+
Sbjct: 355 RGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRN-SVSWNAMIKGYAENGDATEAL 413
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
LF+RM+ G+ ++ + L AC G +++G+R + ++ +
Sbjct: 414 ALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI 457
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/757 (35%), Positives = 414/757 (54%), Gaps = 102/757 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H + K G VF+ SL++ Y++ + A+ +FD+
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDD------------------ 232
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
MP RD SW +I + G A+ + EM + + TV S+
Sbjct: 233 -------------MPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASI 279
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C LGD+S +H +V+K GL + V+N+L+NMYAK G+
Sbjct: 280 LPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGN---------------- 323
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
L A+ F QM RDVV+WNS+IA Y QN A G F M +
Sbjct: 324 ---------------LGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKM-QL 367
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV-GNALISCYAKVGGVE 330
+ L+PD TL S S A K + +H +I+R + V GNA++ YAK
Sbjct: 368 NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAK----- 422
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+G I A ++F+ + +DVV+W ++ GY QN
Sbjct: 423 ----------------------------LGVIDSAHKVFNLIPVKDVVSWNTLISGYTQN 454
Query: 391 GLNKDAVELFRSM--VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
GL +A+E++R M RE K N T ++L+ + + +L G +IH +++ +
Sbjct: 455 GLASEAIEVYRMMEECRE-IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVF 513
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V LI +Y K G + A +F + R+ +V W ++I HG GE+A++LF M +
Sbjct: 514 VGTCLIDLYGKCGRLVDAMCLFYQVP-RESSVPWNAIISCHGIHGHGEKALKLFREMQDE 572
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+KPDH+T++ +L+AC+H GLV++G+ ++++M+ + IKP+ H+ MVDLLGRAG L+
Sbjct: 573 GVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEM 631
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
AY+FI++MPL PD WG+LL ACR+H N++LGK A+++L ++ +N G Y L N+Y++
Sbjct: 632 AYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYAN 691
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
GKWE +R + G+KKT G+S +++ +V +F + HP+ IY ++ + +
Sbjct: 692 VGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAK 751
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+K +G++PD + VL DVEED KE +L HSE+LAIAFG+ISTP + +RI KNLRVC DC
Sbjct: 752 MKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDC 811
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+A KFI ++ +REIVVRD+ RFHHFK G+CSC DYW
Sbjct: 812 HNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 173/641 (26%), Positives = 283/641 (44%), Gaps = 137/641 (21%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ K +HA ++ G S F+ L+N YA +S ++ FD++ K + +WN+++SAY
Sbjct: 90 LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAY 149
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF-TV 148
+ G F+ AI F +++ F T
Sbjct: 150 VRN-------------------------------GHFREAIDCFYQLLLVTKFQADFYTF 178
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
VL +C L D G+K+H +V K G V V SL++MY++ G +A+++FD M
Sbjct: 179 PPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPF 235
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+++ SW N+MI+G QNG +AL + M
Sbjct: 236 RDMGSW-------------------------------NAMISGLIQNGNAAQALDVLDEM 264
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + D T+AS L CA L + IH Y+I+ + V NALI+ YAK G
Sbjct: 265 -RLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGN 323
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ AQK+ +Q + RDVV+W +++ YE
Sbjct: 324 LGDAQKVFQQMFL---------------------------------RDVVSWNSIIAAYE 350
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSL 447
QN A F M G +P+ TL ++ S+++ + + +H +R G ++
Sbjct: 351 QNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAV 410
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ NA++ MY+K G I++A +VFNLI ++ VSW ++I Q+GL EAI+++ M E
Sbjct: 411 VIGNAVMDMYAKLGVIDSAHKVFNLIP-VKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469
Query: 508 L-GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF-----ASMVDLLG 561
IK + T+V +L A H G ++QG R + H IK T H ++DL G
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHG-----HLIK-TNLHLDVFVGTCLIDLYG 523
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDLGKIAAEKLLLIEPDNSG 617
+ G L +A +P E V W +++S +H K L L + ++ ++PD
Sbjct: 524 KCGRLVDAMCLFYQVPRESS-VPWNAIISCHGIHGHGEKALKLFREMQDE--GVKPD--- 577
Query: 618 AYSALCNLYSSC--------GKW----EDAANIRKSMKYVG 646
+ +L S+C GKW I+ S+K+ G
Sbjct: 578 -HVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYG 617
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 199/454 (43%), Gaps = 86/454 (18%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ S+ SCT K++H+ +V +G ++ L+N+YA +GD
Sbjct: 76 EIDFNSLFDSCTKT---LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGD--------- 123
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ L+R FDQ+ +DV TWNSMI+ Y +NG+ EA+
Sbjct: 124 ----------------------VSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDC 161
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F +L + + D +T L AC L G++IH ++ + F V +LI Y+
Sbjct: 162 FYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYS 218
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ G V G AR +FD + RD+ +W AM+
Sbjct: 219 RFGFV---------------------------------GIARSLFDDMPFRDMGSWNAMI 245
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G QNG A+++ M EG ++ T++++L V + L + IH ++ G
Sbjct: 246 SGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLE 305
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
L VSNALI MY+K GN+ A++VF + R + VSW S+I A Q+ A F +
Sbjct: 306 FELFVSNALINMYAKFGNLGDAQKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTARGFFFK 364
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV------- 557
M G++PD +T V + + + R Y ++VH V
Sbjct: 365 MQLNGLEPDLLTLVSLAS-------IAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVM 417
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
D+ + G++ A+ +P++ DVV+W +L+S
Sbjct: 418 DMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISG 450
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 45/241 (18%)
Query: 5 NPPSLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
N + +S L YAH+ LQ ++ +H +IK LHL VF+ L++ Y K
Sbjct: 476 NQGTWVSILAAYAHVGALQQGMR---------IHGHLIKTNLHLDVFVGTCLIDLYGKCG 526
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ A +F ++P ++ WN I+S + G +
Sbjct: 527 RLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGE-------------------------- 560
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
A+++F EM + V P T S+L++C+ G + GK + + G+ +
Sbjct: 561 -----KALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKH 615
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRL-KNVSSWNVVV-SLHIHSGRLDLARAQFDQMIER 240
++++ + G MA M L + S W ++ + IH G ++L + D++ E
Sbjct: 616 YGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIH-GNIELGKFASDRLFEV 674
Query: 241 D 241
D
Sbjct: 675 D 675
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/770 (36%), Positives = 416/770 (54%), Gaps = 101/770 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+++ Y K G + EVF MP ++ V+WT+++ + +F M + +
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT SVL++ + G L G++VH+ VK G V V NSL+NMYAK G AK+V
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M ++ +V+WN+++AG N + EAL
Sbjct: 259 FNWMETRD-------------------------------MVSWNTLMAGLQLNECELEAL 287
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F + + K + T A+ + CANL++L L +Q+H+ +++ F TG V AL
Sbjct: 288 QLFHES-RATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADA 346
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV---- 378
Y+K G + A I + S NV+++T ++ G I+ GDI A +F +R+ V+
Sbjct: 347 YSKCGELADALNIFSMTTGSR-NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEF 405
Query: 379 -------------------------------AWTAMLVGYEQNGLNKDAVELFR------ 401
TA+L Y + G +DA+ +F+
Sbjct: 406 TYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKD 465
Query: 402 -------------------------SMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIH 435
M +G KPN +T+S+++ + + A +D G+Q H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A +++ ++ VS+AL++MYS+ GNI++A+ VF ++ VSW SMI AQHG
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFER-QTDRDLVSWNSMISGYAQHGYS 584
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+AI+ F +M GI+ D +T++ V+ CTH GLV +GQ+Y++ M HKI PT H+A
Sbjct: 585 MKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYAC 644
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDL RAG L E + I +MP + W +LL ACRVHKN++LGK +A+KLL +EP +
Sbjct: 645 MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHD 704
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
S Y L N+Y++ GKW++ +RK M Y VKK G SW+QI+NKVH F D HP
Sbjct: 705 SSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMS 764
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
D IY K+ I +K+ G+ P+T+ VLHD+ ED KE ML HSE+LA+AFGLI+TP T
Sbjct: 765 DQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTP 824
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+I+KNLRVC DCH +K + + DREI++RD +RFHHF G CSC D+W
Sbjct: 825 LQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 212/495 (42%), Gaps = 87/495 (17%)
Query: 105 MPNRDS-VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSA 163
+P RD+ V ++ Y G + F + VL T++ VL +C ++ D
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVL 117
Query: 164 GKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI 222
G+++H VK G G V+ SL++MY K G VF+GM KNV
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNV----------- 166
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
VTW S++ G + E + +F M + + P+ FT A
Sbjct: 167 --------------------VTWTSLLTGCAHAQMHSEVMALFFRM-RAEGIWPNPFTFA 205
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
S LSA A+ L LG+++HA ++ ++ V N+L++ YAK G +VE
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG-------LVED---- 254
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
A+ +F+ + RD+V+W ++ G + N +A++LF
Sbjct: 255 ----------------------AKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE 292
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
K T + ++ + ++L L +Q+H+ L+ G + +V AL YSK G
Sbjct: 293 SRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGE 352
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A +F++ + VSWT++I Q+G A+ LF RM E + P+ TY +L
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK 412
Query: 523 AC-------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
A H +++ ++ + + + S F S D L + IE
Sbjct: 413 ASLSILPPQIHAQVIKTNYQHIPFVGTA--LLASYSKFGSTEDAL-------SIFKMIE- 462
Query: 576 MPLEPDVVAWGSLLS 590
+ DVVAW ++LS
Sbjct: 463 ---QKDVVAWSAMLS 474
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 175/375 (46%), Gaps = 36/375 (9%)
Query: 230 ARAQFDQMIERDV-VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AR D++ RD V N ++ Y++ G E L F+ + + + D TL+ L AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFS-VARRGGVLVDSATLSCVLKAC 109
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
++ LG+Q+H ++ D V A
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRG--------------------------------EVSA 137
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
T+L+D Y+K G + +F+ + ++VV WT++L G ++ + + LF M EG
Sbjct: 138 GTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGI 197
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN +T +++LS +S +LD G+++HA +++ G SS+ V N+L+ MY+K G + A+
Sbjct: 198 WPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKS 257
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VFN + R + VSW +++ L + EA+QLF K TY V+ C +
Sbjct: 258 VFNWMETR-DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLK 316
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+ ++ ++ + H T + ++ D + G L +A N +VV+W ++
Sbjct: 317 QLALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAI 375
Query: 589 LSACRVHKNLDLGKI 603
+S C + ++ L +
Sbjct: 376 ISGCIQNGDIPLAVV 390
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 128/273 (46%), Gaps = 41/273 (15%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF Y+ +L+++L P +HA++IK F+ +L+ Y+K S A
Sbjct: 400 VMPNEFTYSAMLKASLSILPP----QIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDAL 455
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+F + K + +W+ +LS +A+ G + A +FN
Sbjct: 456 SIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFN------------------------- 490
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+M + P +FT++SV+ +C + G++ H+ +K + V+++L+
Sbjct: 491 ------KMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALV 544
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVV 243
+MY++ G+ A+ VF+ +++ SWN ++S + G A F QM I+ D V
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
T+ ++I G + NG E F +M++D + P
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINP 637
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/770 (36%), Positives = 416/770 (54%), Gaps = 101/770 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+++ Y K G + EVF MP ++ V+WT+++ + +F M + +
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT SVL++ + G L G++VH+ VK G V V NSL+NMYAK G AK+V
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M ++ +V+WN+++AG N + EAL
Sbjct: 259 FNWMETRD-------------------------------MVSWNTLMAGLQLNECELEAL 287
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F + + K + T A+ + CANL++L L +Q+H+ +++ F TG V AL
Sbjct: 288 QLFHES-RATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADA 346
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV---- 378
Y+K G + A I + S NV+++T ++ G I+ GDI A +F +R+ V+
Sbjct: 347 YSKCGELADALNIFSMTTGSR-NVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEF 405
Query: 379 -------------------------------AWTAMLVGYEQNGLNKDAVELFR------ 401
TA+L Y + G +DA+ +F+
Sbjct: 406 TYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKD 465
Query: 402 -------------------------SMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIH 435
M +G KPN +T+S+++ + + A +D G+Q H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A +++ ++ VS+AL++MYS+ GNI++A+ VF ++ VSW SMI AQHG
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFER-QTDRDLVSWNSMISGYAQHGYS 584
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+AI+ F +M GI+ D +T++ V+ CTH GLV +GQ+Y++ M HKI PT H+A
Sbjct: 585 MKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYAC 644
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDL RAG L E + I +MP + W +LL ACRVHKN++LGK +A+KLL +EP +
Sbjct: 645 MVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHD 704
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
S Y L N+Y++ GKW++ +RK M Y VKK G SW+QI+NKVH F D HP
Sbjct: 705 SSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMS 764
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
D IY K+ I +K+ G+ P+T+ VLHD+ ED KE ML HSE+LA+AFGLI+TP T
Sbjct: 765 DQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTP 824
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+I+KNLRVC DCH +K + + DREI++RD +RFHHF G CSC D+W
Sbjct: 825 LQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 216/488 (44%), Gaps = 73/488 (14%)
Query: 105 MPNRDS-VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSA 163
+P RD+ V ++ Y G + F + VL T++ VL +C ++ D
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVL 117
Query: 164 GKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI 222
G+++H VK G G V+ SL++MY K G VF+GM KNV
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNV----------- 166
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
VTW S++ G + E + +F M + + P+ FT A
Sbjct: 167 --------------------VTWTSLLTGCAHAQMHSEVMALFFRM-RAEGIWPNPFTFA 205
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
S LSA A+ L LG+++HA ++ ++ V N+L++ YAK G +VE
Sbjct: 206 SVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCG-------LVED---- 254
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
A+ +F+ + RD+V+W ++ G + N +A++LF
Sbjct: 255 ----------------------AKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHE 292
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
K T + ++ + ++L L +Q+H+ L+ G + +V AL YSK G
Sbjct: 293 SRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGE 352
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A +F++ + VSWT++I Q+G A+ LF RM E + P+ TY +L
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLK 412
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
A + Q + ++K + + PS +++ + G ++A + I M + DV
Sbjct: 413 ASLS---ILPPQIHAQVIKTNY--QHIPSVGTALLASYSKFGSTEDALS-IFKMIEQKDV 466
Query: 583 VAWGSLLS 590
VAW ++LS
Sbjct: 467 VAWSAMLS 474
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 175/375 (46%), Gaps = 36/375 (9%)
Query: 230 ARAQFDQMIERDV-VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AR D++ RD V N ++ Y++ G E L F+ + + + D TL+ L AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFS-VARRGGVLVDSATLSCVLKAC 109
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
++ LG+Q+H ++ D V A
Sbjct: 110 RSVPDRVLGEQLHCLCVKCGHDRG--------------------------------EVSA 137
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
T+L+D Y+K G + +F+ + ++VV WT++L G ++ + + LF M EG
Sbjct: 138 GTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGI 197
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN +T +++LS +S +LD G+++HA +++ G SS+ V N+L+ MY+K G + A+
Sbjct: 198 WPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKS 257
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VFN + R + VSW +++ L + EA+QLF K TY V+ C +
Sbjct: 258 VFNWMETR-DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLK 316
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+ ++ ++ + H T + ++ D + G L +A N +VV+W ++
Sbjct: 317 QLALARQLHSCVLK-HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAI 375
Query: 589 LSACRVHKNLDLGKI 603
+S C + ++ L +
Sbjct: 376 ISGCIQNGDIPLAVV 390
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 127/273 (46%), Gaps = 41/273 (15%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF Y+ +L+++L P +HA++IK + +L+ Y+K S A
Sbjct: 400 VMPNEFTYSAMLKASLSILPP----QIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDAL 455
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+F + K + +W+ +LS +A+ G + A +FN
Sbjct: 456 SIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFN------------------------- 490
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+M + P +FT++SV+ +C + G++ H+ +K + V+++L+
Sbjct: 491 ------KMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALV 544
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVV 243
+MY++ G+ A+ VF+ +++ SWN ++S + G A F QM I+ D V
Sbjct: 545 SMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
T+ ++I G + NG E F +M++D + P
Sbjct: 605 TFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINP 637
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/716 (36%), Positives = 405/716 (56%), Gaps = 78/716 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G+L + + RD V+W T++ + + +F A+ EMV + V
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVE 295
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKA 201
P FT++SVL +C+ L L GK++H++ +K G L V ++L++MY K
Sbjct: 296 PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN------CKQ 349
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
V G R+ FD M +R + WN+MI GY+QN YD EA
Sbjct: 350 VLSGCRV-------------------------FDGMFDRKIGLWNAMITGYAQNEYDEEA 384
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + L + T+A + AC + IH ++++ D V NAL+
Sbjct: 385 LLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMD 444
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+++G ++IA +RIF + DRD+V W
Sbjct: 445 MYSRLGKIDIA---------------------------------KRIFGKMEDRDLVTWN 471
Query: 382 AMLVGYEQNGLNKDAVELFRSM-----------VREGPKPNNYTLSAMLSVSSSLASLDH 430
++ GY + ++DA+ + M R KPN+ TL +L ++L++L
Sbjct: 472 TIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAK 531
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GK+IHA A+++ A+ ++V +AL+ MY+K G + +R+VF+ I R ++W +++A
Sbjct: 532 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRN-VITWNVIVMAYG 590
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG ++AI + M+ G+KP+ +T++ V AC+H G+V +G + + MK + ++P+
Sbjct: 591 MHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSS 650
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV-AWGSLLSACRVHKNLDLGKIAAEKLL 609
H+A +VDLLGRAG ++EAY I +P D AW SLL ACR+H NL++G+IAA+ L+
Sbjct: 651 DHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLI 710
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP+ + Y L N+YSS G W A +R++MK GV+K G SW++ ++VH F D
Sbjct: 711 QLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGD 770
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HPQ + + + +W+ +++ G++PDT+ VLH+VEED KE +L HSEKLAIAFG+++
Sbjct: 771 SSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 830
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T T +R+ KNLRVCNDCH A KFI K+VDREI++RD RFHHFK G CSC DYW
Sbjct: 831 TSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/610 (23%), Positives = 269/610 (44%), Gaps = 95/610 (15%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
SP E++ LL+S ++S L + +I G+ F +L+ A + + K++
Sbjct: 57 SP-EWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQI 115
Query: 71 FDEM-----PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+ V ++ NT+++ Y K G +VF+ + R+ VSW ++I + +
Sbjct: 116 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 175
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG---DLSAGKKVHSFVVKTGLSGCVNV 182
++ A+ F M+ + V P+ FT+ SV +C+ L GK+VH++ ++ G +
Sbjct: 176 WEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSF-I 234
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N+L+ MY K+G +K + +++ +WN V+S
Sbjct: 235 INTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLS----------------------- 271
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
QN EAL M+ + ++PD FT++S L AC++LE L+ GK++HA
Sbjct: 272 --------SLCQNEQFLEALEYLREMVLE-GVEPDGFTISSVLPACSHLEMLRTGKELHA 322
Query: 303 YIIRT-EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y ++ D VG+AL+ D Y
Sbjct: 323 YALKNGSLDENSFVGSALV---------------------------------DMYCNCKQ 349
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLS 420
+ R+FD + DR + W AM+ GY QN +++A+ LF M G N+ T++ ++
Sbjct: 350 VLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVP 409
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ + IH ++ G V NAL+ MYS+ G I+ A+R+F + R + V
Sbjct: 410 ACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDR-DLV 468
Query: 481 SWTSMIVALAQHGLGEEAIQLF-----------ERMLELGIKPDHITYVGVLTACTHGGL 529
+W ++I E+A+ + ER + +KP+ IT + +L +C
Sbjct: 469 TWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSA 528
Query: 530 VEQGQRY--YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
+ +G+ Y + N+ S ++VD+ + G LQ + + +P+ +V+ W
Sbjct: 529 LAKGKEIHAYAIKNNLATDVAVGS---ALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNV 584
Query: 588 LLSACRVHKN 597
++ A +H N
Sbjct: 585 IVMAYGMHGN 594
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 25/292 (8%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H ++K GL F++N+LM+ Y++ I AK++F +M + L +WNTI++ Y R
Sbjct: 423 IHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSER 482
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ A + + M +I K + R + + P T+ ++L S
Sbjct: 483 HEDALLMLHKM----------------QILERKASER----ASRVSLKPNSITLMTILPS 522
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C AL L+ GK++H++ +K L+ V V ++L++MYAK G M++ VFD + ++NV +W
Sbjct: 523 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITW 582
Query: 215 NVVVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
NV+V + G +D+ R Q ++ + VT+ S+ A S +G E L +F NM K
Sbjct: 583 NVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKK 642
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
D ++P A + ++K Q+ I R FD G + L +C
Sbjct: 643 DYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRN-FDKAGAWSSLLGAC 693
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 14/243 (5%)
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W +L ++ L ++AV + M+ G KP+N+ A+L + L +D GKQIHA
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 440 RSGEA-SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+ G S++V+N L+ +Y K G+ A +VF+ I R + VSW S+I +L E A
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ-VSWNSLISSLCSFEKWEMA 179
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS--- 555
++ F ML+ ++P T V V AC++ + E M K VH S
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEG----LLMGKQVHAYGLRKGELNSFII 235
Query: 556 --MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CRVHKNLDLGKIAAEKLLL-I 611
+V + G+ G L + + + D+V W ++LS+ C+ + L+ + E +L +
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGR-DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGV 294
Query: 612 EPD 614
EPD
Sbjct: 295 EPD 297
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA IK L V + ++L++ YAK + ++KVFD++P++ + +WN I+ AY
Sbjct: 532 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGM 591
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G A ++ +M PN V++ ++ + G +++F M +D
Sbjct: 592 HGNSQDAIDMLRMMMVQGVKPNE--VTFISVFAACSHSGMVNEGLKIFYNMKKD 643
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/776 (35%), Positives = 413/776 (53%), Gaps = 98/776 (12%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P EF ++ ++ + SR+ G+ VH +++ G VF N+L++ Y+K
Sbjct: 203 PNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKL--------- 253
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
G +++A VF MP D VSW I G A+
Sbjct: 254 ----------------------GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRAL 291
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+ ++M ++P FT++SVL +C G + G+++H F+VK V L++MY
Sbjct: 292 ELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMY 351
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
AK G A+ VFD M +++ WN ++I+
Sbjct: 352 AKHGFLDDARKVFDFMPRRDLILWN-------------------------------ALIS 380
Query: 251 GYSQNGYDFEALGMFANMLKDS-SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
G S +G E L +F M K+ L ++ TLAS L + A+ E + +Q+HA +
Sbjct: 381 GCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGL 440
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+ V N LI Y K G ++ A K+ ++S
Sbjct: 441 LSDSHVINGLIDSYWKCGQLDYAIKVFKES------------------------------ 470
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
R D+++ T M+ Q +DA++LF M+R+G +P+++ LS++L+ +SL++ +
Sbjct: 471 ---RSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYE 527
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
GKQ+HA ++ S + NAL+ Y+K G+I A F+ + R VSW++MI L
Sbjct: 528 QGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERG-IVSWSAMIGGL 586
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQHG G+ A+ LF RML+ G+ P+HIT VL+AC H GLV+ ++Y+ MK I T
Sbjct: 587 AQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRT 646
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H+A M+D+LGRAG L++A + NMP + + WG+LL A RVH++ +LG++AAEKL
Sbjct: 647 EEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLF 706
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP+ SG + L N Y+S G W++ A +RK MK VKK SWV+I++KVH F V D
Sbjct: 707 TLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGD 766
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP IY K+A++ D + + G+VP+ LHDV+ KE +L HHSE+LA+AF LIS
Sbjct: 767 KSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALIS 826
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TP +R+ KNLR+C DCH A K+I K+V REI++RD RFHHF G CSC DYW
Sbjct: 827 TPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 198/743 (26%), Positives = 315/743 (42%), Gaps = 159/743 (21%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
SR+ F G +H+ ++K GL L+ F N L+ Y++ S A+ VFDE+P SW+++
Sbjct: 17 SRSLFAGAHLHSHLLKSGL-LAGF-SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSL 74
Query: 86 LSAYAKQGRLDLACEVFNLMPNR------------------------------------D 109
++AY+ G A F M R D
Sbjct: 75 VTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRFGAQVHALAVATRLVHD 134
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMF-----------------------------------V 134
++ Y G A RMF
Sbjct: 135 VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFR 194
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EMV P +F + V+ +CT DL AG++VH VV+TG V N+L++MY+K+G
Sbjct: 195 EMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLG 254
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
D MA VF+ M +V SW N+ I+G
Sbjct: 255 DIEMAATVFEKMPAADVVSW-------------------------------NAFISGCVT 283
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G+D AL + M K S L P+ FTL+S L ACA LG+QIH ++++ D
Sbjct: 284 HGHDHRALELLLQM-KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEF 342
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V L+ YAK G LD AR++FD +
Sbjct: 343 VAVGLVDMYAKHG------------------------FLD---------DARKVFDFMPR 369
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG--PKPNNYTLSAMLSVSSSLASLDHGK 432
RD++ W A++ G +G + + + LF M +EG N TL+++L ++S ++ H +
Sbjct: 370 RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTR 429
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
Q+HA A + G S V N LI Y K G ++ A +VF + +S T+M+ AL+Q
Sbjct: 430 QVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESR-SDDIISSTTMMTALSQC 488
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP--TP 550
GE+AI+LF +ML G++PD +L ACT EQG++ + H IK T
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVH-----AHLIKRQFTS 543
Query: 551 SHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
FA ++V + G +++A +P E +V+W +++ H + GK A +
Sbjct: 544 DVFAGNALVYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMIGGLAQHGH---GKRALDLF 599
Query: 609 -LLIEPDNSGAYSALCNLYSSC---GKWEDAANIRKSMKYV-GVKKTQGFSWVQIQNKVH 663
+++ + + L ++ S+C G +DA +SMK G+ +T+ I
Sbjct: 600 HRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGR 659
Query: 664 VFGVEDWLHPQRDAIYNKMAKIW 686
+ED + + + A +W
Sbjct: 660 AGKLEDAMELVNNMPFQANAAVW 682
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/755 (36%), Positives = 427/755 (56%), Gaps = 99/755 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA ++K +++VF+ N+L ++ YA+
Sbjct: 337 GMFIHATVLKSSYYINVFVANAL-------------------------------IAMYAR 365
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G++ A +F M + D++SW +++ + + G + A++ + EM P V S+
Sbjct: 366 FGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 425
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+A+ G+ G ++H++ +K GL + V NSL++MYAK F M+ +
Sbjct: 426 IAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK----------FCSMKYMDC 475
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
FD+M ++DVV+W ++IAG++QNG AL +F ++
Sbjct: 476 I---------------------FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE-VQL 513
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ D ++S L AC+ L+ + K+IH+YIIR
Sbjct: 514 EGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL---------------------- 551
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+V Q+GI +D Y + G++ A R+F+ + +DVV+WT+M+ Y NG
Sbjct: 552 -SDLVLQNGI-----------VDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 599
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L +A+ELF M G +P++ +L ++LS ++SL++L GK+IH +R G S+++
Sbjct: 600 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS 659
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
L+ MY++ G + +R VFN I ++ V WTSMI A HG G AI LF RM + I
Sbjct: 660 TLVDMYARCGTLEKSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 718
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PDHI +V VL AC+H GL+ +G+R+ MK ++++P P H+ +VDLLGRA L+EAY
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQ 778
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
F++ M +EP W +LL AC++H N +LG+IAA+KLL ++P+N G Y + N+Y++ +
Sbjct: 779 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERR 838
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI-K 690
W+D +R MK G+KK G SW+++ NKVH F D HPQ IY+K+++I +++ K
Sbjct: 839 WKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 898
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+V T VLH+ +E+ K QML HSE+LAIA+G+++TPE +LRI KNLRVC DCH+
Sbjct: 899 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHN 958
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K +RE+V+RDA RFHHFK G+CSC D W
Sbjct: 959 FCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 272/624 (43%), Gaps = 126/624 (20%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESIS 65
PS S E Y+ +L+ + G+ VHA +I L SVFL L+ Y K +
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A+K+FD M P++ +W +I Y G
Sbjct: 168 DAEKLFDGM-------------------------------PHKTIFTWNAMIGAYVTNGE 196
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
++ ++ EM + T +L +C L D G +VH +K G V V NS
Sbjct: 197 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANS 256
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
++ MY K D A+ +FD M K +V SW
Sbjct: 257 IVGMYTKCNDLNGARQLFDRMPEKEDVVSW------------------------------ 286
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
NSMI+ YS NG EAL +F M K +SL P+ +T + L AC + +K G IHA +
Sbjct: 287 -NSMISAYSSNGQSIEALRLFGEMQK-ASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 344
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+++ + V NALI+ YA + G +G
Sbjct: 345 LKSSYYINVFVANALIAMYA---------------------------------RFGKMGE 371
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A IF ++ D D ++W +ML G+ QNGL +A++ + M G KP+ + ++++ S+
Sbjct: 372 AANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASAR 431
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+ +G QIHA A+++G S L V N+L+ MY+K ++ +F+ + ++ VSWT+
Sbjct: 432 SGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DKDVVSWTT 490
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
+I AQ+G A++LF + GI D + +L AC+ G + + +K +H
Sbjct: 491 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVKEIH 543
Query: 545 K--IKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
I+ S +VD+ G G + A E + + DVV+W S++S C VH L
Sbjct: 544 SYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS-CYVHNGL- 600
Query: 600 LGKIAAEKLLL--------IEPDN 615
A E L L +EPD+
Sbjct: 601 ----ANEALELFHLMKETGVEPDS 620
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 163/337 (48%), Gaps = 42/337 (12%)
Query: 260 EALGMFANMLKDSSLKPDKFTL----ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EA ++ + S P +F+L +S L C + + L G+Q+HA++I +
Sbjct: 94 EAFQSLTDLFANQS--PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITS-------- 143
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL + +V T L+ Y K G + A ++FD + +
Sbjct: 144 -NALFN-----------------------SVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 179
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ W AM+ Y NG ++EL+R M G + T +L L G ++H
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A++ G S + V+N+++ MY+K ++N AR++F+ + +++ VSW SMI A + +G
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFA 554
EA++LF M + + P+ T+V L AC ++QG + ++K+ + I ++
Sbjct: 300 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN-- 357
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++ + R G + EA N NM + D ++W S+LS
Sbjct: 358 ALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSG 393
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/647 (39%), Positives = 375/647 (57%), Gaps = 69/647 (10%)
Query: 142 LPTQFT-VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
L T F +VL C + G++VH+ ++KT CV + L+ Y K
Sbjct: 54 LDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKC------- 106
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
D +R AR FD M ER+VV+W +MI+ YSQ GY +
Sbjct: 107 ---DSLRD---------------------ARHVFDVMPERNVVSWTAMISAYSQRGYASQ 142
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL +F ML+ S +P++FT A+ L++C LG+QIH++II+ ++A VG
Sbjct: 143 ALSLFVQMLR-SGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVG---- 197
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
++LLD Y K G I AR IF L +RDVV+
Sbjct: 198 -----------------------------SSLLDMYAKDGKIHEARGIFQCLPERDVVSC 228
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TA++ GY Q GL+++A+ELFR + REG + N T +++L+ S LA+LDHGKQ+H LR
Sbjct: 229 TAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLR 288
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
S S + + N+LI MYSK GN+ ARR+F+ +H R +SW +M+V ++HG G E ++
Sbjct: 289 SEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERT-VISWNAMLVGYSKHGEGREVLE 347
Query: 501 LFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQR-YYNMMKNVHKIKPTPSHFASMVD 558
LF M+ E +KPD +T + VL+ C+HGGL ++G +Y+M ++P H+ +VD
Sbjct: 348 LFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVD 407
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+LGRAG ++ A+ F++ MP EP WG LL AC VH NLD+G+ +LL IEP+N+G
Sbjct: 408 MLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGN 467
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L NLY+S G+WED ++R M V K G SW+++ +H F D HP+R+ +
Sbjct: 468 YVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEV 527
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
K+ ++ KE G+VPD + VLHDV+E+ KE++L HSEKLA+ FGLI+TPE+ +R+
Sbjct: 528 SAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRV 587
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLR+C DCH+ K+ K+ RE+ +RD RFH G CSC DYW
Sbjct: 588 IKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 217/481 (45%), Gaps = 101/481 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L L+ R G+ VHA +IK V+L+ L+ FY K +S+ A+ VFD
Sbjct: 61 YNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFD--- 117
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+MP R+ VSWT +I Y++ G A+ +FV+
Sbjct: 118 ----------------------------VMPERNVVSWTAMISAYSQRGYASQALSLFVQ 149
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ P +FT +VL SC G+++HS ++K V V +SLL+MYAK G
Sbjct: 150 MLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGK 209
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
IH AR F + ERDVV+ ++I+GY+Q
Sbjct: 210 --------------------------IHE-----ARGIFQCLPERDVVSCTAIISGYAQL 238
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL +F + ++ ++ + T S L+A + L L GKQ+H +++R+E + +
Sbjct: 239 GLDEEALELFRRLQRE-GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVL 297
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI Y+K G + A++ IFD+L +R
Sbjct: 298 QNSLIDMYSKCGNLTYARR---------------------------------IFDTLHER 324
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
V++W AMLVGY ++G ++ +ELF M+ E KP++ T+ A+LS S D G I
Sbjct: 325 TVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDI 384
Query: 435 HASALRSGEASSLSVSN---ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ SG+ S S ++ M +AG + AA + + W ++ A +
Sbjct: 385 FYD-MTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSV 443
Query: 492 H 492
H
Sbjct: 444 H 444
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 63/280 (22%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P EF +A +L S + S +G+ +H+ IIK V++ +SL++ YAK
Sbjct: 157 PNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAK---------- 206
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
G++ A +F +P RD VS T II Y ++G + A+
Sbjct: 207 ---------------------DGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEAL 245
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+F + ++ + T TSVL + + L L GK+VH+ ++++ + V + NSL++MY
Sbjct: 246 ELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMY 305
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K G+ A+ +FD +LH ER V++WN+M+
Sbjct: 306 SKCGNLTYARRIFD--------------TLH-----------------ERTVISWNAMLV 334
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
GYS++G E L +F M+ ++ +KPD T+ + LS C++
Sbjct: 335 GYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSH 374
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/637 (39%), Positives = 381/637 (59%), Gaps = 67/637 (10%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L CT L G+ VH+ ++++ + + N+LLNMYAK G
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS------------- 110
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
L+ AR F++M +RD VTW ++I+GYSQ+ +AL F M
Sbjct: 111 ------------------LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L+ P++FTL+S + A A + G Q+H + ++ FD+ VG+AL
Sbjct: 153 LR-FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL--------- 202
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
LD Y + G + A+ +FD+L R+ V+W A++ G+
Sbjct: 203 ------------------------LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+ + A+ELF+ M+R+G +P++++ +++ SS L+ GK +HA ++SGE
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
N L+ MY+K+G+I+ AR++F+ + +++ VSW S++ A AQHG G+EA+ FE M +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
GI+P+ I+++ VLTAC+H GL+++G YY +MK I P H+ ++VDLLGRAG L
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FIE MP+EP W +LL+ACR+HKN +LG AAE + ++PD+ G + L N+Y+S
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W DAA +RK MK GVKK SWV+I+N +H+F D HPQR+ I K ++ +
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 536
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IKE+G+VPDT+ V+ V++ +E L++HSEK+A+AF L++TP +T+ I KN+RVC DC
Sbjct: 537 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 596
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+AIK K+V REI+VRD RFHHFK G CSC+DYW
Sbjct: 597 HTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 196/431 (45%), Gaps = 67/431 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+L+ YAK G L+ A +VF MP RD V+WTT+I Y++ R +A+ F +M++
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT++SV+ + A G ++H F VK G V+V ++LL++Y + G A+ V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + +N SW N++IAG+++ +AL
Sbjct: 219 FDALESRNDVSW-------------------------------NALIAGHARRSGTEKAL 247
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ML+D +P F+ AS AC++ L+ GK +HAY+I++ GN L+
Sbjct: 248 ELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+KI FD L RDVV+W +
Sbjct: 307 YAKSGSIHDARKI---------------------------------FDRLAKRDVVSWNS 333
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+L Y Q+G K+AV F M R G +PN + ++L+ S LD G + + G
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ + +AG++N A R + W +++ A H E
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 503 ERMLELGIKPD 513
E + EL PD
Sbjct: 454 EHVFEL--DPD 462
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 171/331 (51%), Gaps = 38/331 (11%)
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+N L+ S + D+ + L C + L G+ +HA+I+++ F +GN L++ YAK
Sbjct: 48 SNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK 107
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A+K+ E+ + RD V WT ++
Sbjct: 108 CGSLEEARKVFEK---------------------------------MPQRDFVTWTTLIS 134
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY Q+ DA+ F M+R G PN +TLS+++ +++ G Q+H ++ G S
Sbjct: 135 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
++ V +AL+ +Y++ G ++ A+ VF+ + R + VSW ++I A+ E+A++LF+ M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAGHARRSGTEKALELFQGM 253
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAG 564
L G +P H +Y + AC+ G +EQG+ + M+K+ K+ + +++D+ ++G
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSG 311
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ +A + + + DVV+W SLL+A H
Sbjct: 312 SIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 64/281 (22%)
Query: 11 SPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
SP EF + ++++ R G +H +KCG +V + ++L++ Y + + A+
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFD + + SWN +++ +A++ + A E+F
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQ-------------------------- 251
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
M++D P+ F+ S+ +C++ G L GK VH++++K+G N+LL+M
Sbjct: 252 -----GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YAK G A+ +FD + ++V SW NS++
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSW-------------------------------NSLL 335
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
Y+Q+G+ EA+ F M + ++P++ + S L+AC++
Sbjct: 336 TAYAQHGFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSH 375
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +IK G L F N+L++ YAK+ SI A+K+FD + + + SWN++L+AYA+
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
G A F M PN +S+ +++ + G + M +D ++P
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPN--EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+ +V+ GDL+ + F+ + + + +LLN
Sbjct: 399 WHYVTVVDLLGRAGDLNRALR---FIEEMPIEPTAAIWKALLN 438
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/641 (39%), Positives = 384/641 (59%), Gaps = 74/641 (11%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---VGDEMMAKAVFDGM 206
++L C + + G++VH+ ++KT V + L+ +Y K +GD
Sbjct: 95 TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGD----------- 143
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
AR FD+M +++VV+W +MI+ YSQ G+ FEAL +F
Sbjct: 144 -----------------------AREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFV 180
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML+ S +P+ FT A+ L++C + G+QIH+ I+ +++ VG
Sbjct: 181 EMLR-SDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVG---------- 229
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
++LLD Y K G I A +F L +RDVVA TA++ G
Sbjct: 230 -----------------------SSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISG 266
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q GL+++A++LFR + EG N+ T +++L+ S LA+L+HGKQ+H+ LRSG+ S
Sbjct: 267 YAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 326
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ + N+LI MYSK GN+ ARR+F+ + R +SW +M+V ++HG+ E ++LF+ M
Sbjct: 327 VVLLNSLIDMYSKCGNVCYARRIFDSMPERT-CISWNAMLVGYSKHGMAREVLELFKLMR 385
Query: 507 ELG-IKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
E +KPD ITY+ VL+ C+HG L + G + +YNM+ I+P H+ +VDLLGRAG
Sbjct: 386 EENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAG 445
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++EA++FI+ MP P WGSLL +CRVH ++++G I +KLL +EP+N+G Y L N
Sbjct: 446 RVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSN 505
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY+S GKWED NIR M+ V K G SWV++ VH F D HP+R+ + K+ +
Sbjct: 506 LYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKE 565
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ + KE G+VPD + VL+DV+E+ KE++L HSEKLA+AFGLI+TPE TT+R++KNLR+
Sbjct: 566 LSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRI 625
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCHS KF+ +L R +++RD RFH+ G+CSC DYW
Sbjct: 626 CVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 219/499 (43%), Gaps = 99/499 (19%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
E Y +L + R G+ VH +IK SV+L+ L+ Y K + + A+++FD
Sbjct: 90 FEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFD 149
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
EM P ++ VSWT +I Y++ G A+ +
Sbjct: 150 EM-------------------------------PQKNVVSWTAMISAYSQRGFAFEALNL 178
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
FVEM++ P FT ++L SC G+++HS +K + V +SLL+MYAK
Sbjct: 179 FVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAK 238
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
SGR+ A F + ERDVV ++I+GY
Sbjct: 239 -------------------------------SGRICDAHGVFHCLPERDVVACTAIISGY 267
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+Q G D EAL +F L+ + + T AS L+A + L L GKQ+H++++R+ +
Sbjct: 268 AQMGLDEEALKLF-RQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 326
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+ N+LI Y+K G V A RRIFDS+
Sbjct: 327 VVLLNSLIDMYSKCGNVCYA---------------------------------RRIFDSM 353
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHG 431
+R ++W AMLVGY ++G+ ++ +ELF+ M E KP++ T A+LS S D G
Sbjct: 354 PERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMG 413
Query: 432 KQIHASAL--RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
+I + + + G + ++ + +AG + A + + W S++ +
Sbjct: 414 LEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSC 473
Query: 490 AQHGLGEEAIQLFERMLEL 508
H E I + +++LEL
Sbjct: 474 RVHSDVEIGIIVGQKLLEL 492
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/763 (35%), Positives = 423/763 (55%), Gaps = 68/763 (8%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES--ISYAKKVFDEMPVKTLCSW 82
K ++ + K +H+ IK GL + ++ F ES + YA++VFD +P TL W
Sbjct: 16 KCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIW 75
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT++ Y++ I +N + M++ M+ +
Sbjct: 76 NTMIKGYSR-------------------------------INHPQNGVSMYLLMLASNIK 104
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT +L T L GK + + VK G + V + ++M++ +A+ V
Sbjct: 105 PDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKV 164
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD +W +VVTWN M++GY++ F+
Sbjct: 165 FD-----MGDAW--------------------------EVVTWNIMLSGYNRVK-QFKKS 192
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
M ++ + P+ TL LSAC+ L+ L+ GK I+ YI + + N LI
Sbjct: 193 KMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDM 252
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+A G ++ AQ + + + +VI++T+++ G+ IG I AR+ FD + +RD V+WTA
Sbjct: 253 FAACGEMDEAQSVFDN--MKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTA 310
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY + +A+ LFR M KP+ +T+ ++L+ + L +L+ G+ + ++
Sbjct: 311 MIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNS 370
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V NALI MY K GN+ A++VF +H ++ +WT+MIV LA +G GEEA+ +F
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGEEALAMF 429
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M+E I PD ITY+GVL ACTH G+VE+GQ ++ M H IKP +H+ MVDLLGR
Sbjct: 430 SNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGR 489
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA+ I NMP++P+ + WGSLL ACRVHKN+ L ++AA+++L +EP+N Y L
Sbjct: 490 AGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLL 549
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
CN+Y++C +WE+ +RK M G+KKT G S +++ V+ F D HPQ IY K+
Sbjct: 550 CNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 609
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ ++ + G+ PDT+ V D+ E+ KE L HSEKLAIA+ LIS+ T+RI+KNL
Sbjct: 610 ENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNL 669
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+C DCH K + + +RE++VRD TRFHHF+ G CSC ++W
Sbjct: 670 RMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 145/560 (25%), Positives = 266/560 (47%), Gaps = 79/560 (14%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P F + LL+ ++ GK++ +K G ++F++ + ++ ++ +
Sbjct: 101 SNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDL 160
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
A+KVFD + +WN +LS YN + +F
Sbjct: 161 ARKVFDMGDAWEVVTWNIMLSG-------------------------------YNRVKQF 189
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
K + +F+EM + V P T+ +L++C+ L DL GK ++ ++ + + + N L
Sbjct: 190 KKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVL 249
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++M+A G+ A++VFD M+ ++V SW +V+ + G++DLAR FDQ+ ERD V+W
Sbjct: 250 IDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWT 309
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MI GY + EAL +F M + S++KPD+FT+ S L+ACA+L L+LG+ + YI +
Sbjct: 310 AMIDGYLRMNRFIEALALFREM-QMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
VGNALI Y K G++G A+
Sbjct: 369 NSIKNDTFVGNALIDMYFKC---------------------------------GNVGKAK 395
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
++F + +D WTAM+VG NG ++A+ +F +M+ P+ T +L +
Sbjct: 396 KVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAG 455
Query: 427 SLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
++ G+ S ++ G +++ ++ + +AG + A V + + ++ W S+
Sbjct: 456 MVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSL 515
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPD----HITYVGVLTACTHGGLVEQGQRYYNMMK 541
+ A H + A +++LEL +P+ ++ + AC + Q ++ MM+
Sbjct: 516 LGACRVHKNVQLAEMAAKQILEL--EPENGAVYVLLCNIYAACKRWENLRQVRKL--MME 571
Query: 542 NVHKIKPTPSHFASMVDLLG 561
IK TP S+++L G
Sbjct: 572 R--GIKKTPG--CSLMELNG 587
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 40/238 (16%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +++S L AHL L G+ V I K + F+ N+L++ Y K +
Sbjct: 338 PDEFTMVSILTACAHLGALEL-------GEWVKTYIDKNSIKNDTFVGNALIDMYFKCGN 390
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ AKKVF E M ++D +WT +IV
Sbjct: 391 VGKAKKVFKE-------------------------------MHHKDKFTWTAMIVGLAIN 419
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH-SFVVKTGLSGCVNV 182
G + A+ MF M++ + P + T VL +CT G + G+ S ++ G+ V
Sbjct: 420 GHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTH 479
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
++++ + G A V M +K N W ++ + LA Q++E
Sbjct: 480 YGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILE 537
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 274/763 (35%), Positives = 413/763 (54%), Gaps = 106/763 (13%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
RN G +H +K G V++ SL++ Y + ++ A+ +FDEM
Sbjct: 164 RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEM------------ 211
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQ 145
P RD SW +I Y + G K A+ + + D V
Sbjct: 212 -------------------PTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSV---- 248
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
TV S+L++CT GD + G +HS+ +K GL + V+N L+++YA+ G
Sbjct: 249 -TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGS---------- 297
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
L + FD+M RD+++WNS+I Y N A+ +F
Sbjct: 298 ---------------------LKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLF 336
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYA 324
M + S ++PD TL S S + L +++ + + + +R F +GNA++ YA
Sbjct: 337 QEM-RLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K+G V+ AR +F+ L ++DV++W ++
Sbjct: 396 KLGLVD---------------------------------SARAVFNWLPNKDVISWNTII 422
Query: 385 VGYEQNGLNKDAVELFRSMVREGPK--PNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
GY QNG +A+E++ M EG + N T ++L S +L G ++H L++G
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 482
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V +L MY K G ++ A +F I R +V W ++I HG GE+A+ LF
Sbjct: 483 LYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLF 541
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ ML+ G+KPDHIT+V +L+AC+H GLV++G+ + MM+ + I P+ H+ MVDL GR
Sbjct: 542 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGR 601
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+ A NFI++MPL+PD WG+LLSACRVH N+DLGKIA+E L +EP++ G + L
Sbjct: 602 AGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 661
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+S GKWE IR G++KT G+S +++ NKV VF + HP + +Y ++
Sbjct: 662 SNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYREL 721
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ +++K +G+VPD VL DVE+D KE +L HSE+LA+AF LI+TP TT+RI KNL
Sbjct: 722 TALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNL 781
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHS KFI K+ +REI+VRD+ RFHHFK G+CSC DYW
Sbjct: 782 RVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 159/609 (26%), Positives = 262/609 (43%), Gaps = 118/609 (19%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF-V 134
++ +C +++ Y G + LA F+ + NRD +W +I Y G IR F +
Sbjct: 83 IQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSL 142
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M+ + P T SVL +C + D G K+H +K G V V SL+++Y + G
Sbjct: 143 FMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYG 199
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ A+ +FD M +++ SWN +MI+GY Q
Sbjct: 200 AVVNARILFDEMPTRDMGSWN-------------------------------AMISGYCQ 228
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G EAL L D D T+ S LSAC G IH+Y I+ ++
Sbjct: 229 SGNAKEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N LI YA+ G ++ QK +FD +
Sbjct: 284 VSNKLIDLYAEFGSLKDCQK---------------------------------VFDRMYV 310
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD+++W +++ YE N A+ LF+ M +P+ TL ++ S+ S L + + +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSV 370
Query: 435 HASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
LR G +++ NA++ MY+K G +++AR VFN + ++ +SW ++I AQ+G
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NKDVISWNTIISGYAQNG 429
Query: 494 LGEEAIQLFERMLELG--IKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTP 550
EAI+++ M E G I + T+V VL AC+ G + QG + + ++KN +
Sbjct: 430 FASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 489
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMP--------------------------------- 577
S+ D+ G+ G L +A + +P
Sbjct: 490 G--TSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 547
Query: 578 -LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IEPDNSGAYSALCNLYSSCGKWE 633
++PD + + +LLSAC +D G+ E + I P + Y + +LY G+ E
Sbjct: 548 GVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITP-SLKHYGCMVDLYGRAGQLE 606
Query: 634 DAANIRKSM 642
A N KSM
Sbjct: 607 IALNFIKSM 615
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+L K +HA + S ++ +S L+ +Y GN+ AR F+ IH R + +W MI
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR-DVYAWNLMI 124
Query: 487 VALAQHGLGEEAIQLFER-MLELGIKPDHITYVGVLTAC---THGGLVEQGQRYYNMMKN 542
+ G E I+ F ML G++PD+ T+ VL AC T G + + M +
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFMWD 184
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
V+ AS++ L R G + A + MP D+ +W +++S
Sbjct: 185 VYVA-------ASLIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISG 225
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/717 (37%), Positives = 422/717 (58%), Gaps = 22/717 (3%)
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY-NEIGRFKNA 129
F + ++ L S N +L+ Y K LD A ++F+ + ++++ +WT +I + G +
Sbjct: 59 FKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELV 118
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+F EM D P Q+T++SVL C+ ++ GK +H+++++ G+ G V + NS+L++
Sbjct: 119 FSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDL 178
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K + A++ F+ M K+V SWN+++ ++ G ++ + F +DVV+WN++I
Sbjct: 179 YLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTII 238
Query: 250 AGYSQNGYDFEALGMFANML-KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
G Q GY+ AL M+ + P F++A L ++L +++G+Q+H ++
Sbjct: 239 DGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALIL--VSSLSLVEVGRQLHGRVLTFG 296
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
++ G + ++L+ Y K G ++ A I++ +++L G + P R+
Sbjct: 297 LNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLR--------KGNFGVTCKEPKARM 348
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
V+W++M+ GY NG +D ++ FRSMV E + T++ ++S ++ L
Sbjct: 349 ---------VSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGIL 399
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ GKQIHA + G V ++LI MYSK+G+++ A +F I V WTSMI
Sbjct: 400 EFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISG 458
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
A HG G+EAI LFE ML LGI P+ +T+VGVL AC+H GL+E+G RY+ MMK+ + I P
Sbjct: 459 CALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINP 518
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ SMV+L GRAG L EA NFI + W S LS+CR+HKN ++GK +E L
Sbjct: 519 EVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEML 578
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L P + AY L N+ SS +W++AA +R M GVKK G SWVQ+++++H F V
Sbjct: 579 LQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVG 638
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D HPQ IY+ + + +KE+G+ D V+ DVEE+ E ++ HHSEKLA+ F +I
Sbjct: 639 DRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFSII 698
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T T +RIMKNLR+CNDCH+ K+ +L++REI+VRD RFHHFK+ CSC +YW
Sbjct: 699 NTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 224/478 (46%), Gaps = 56/478 (11%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L+ + N GK +HA I++ G+ V L+NS+++ Y K + YA+ F+ M K
Sbjct: 140 VLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKD 199
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ SWN ++ AY ++G ++ + E+F PN+D VSW TII + G + A+ MV
Sbjct: 200 VVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVA 259
Query: 139 --DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ P F++ +L S +L + G+++H V+ GL+ + +SL+ MY K G
Sbjct: 260 HGTEFSPVTFSIALILVSSLSL--VEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRM 317
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A + + L + N V+ R+ V+W+SM++GY NG
Sbjct: 318 DKASTILKDVPLNFLRKGNFGVTCKEPKARM---------------VSWSSMVSGYVWNG 362
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+ + F +M+ + + D T+A+ +SACAN L+ GKQIHAYI + VG
Sbjct: 363 KYEDGMKTFRSMVCE-LIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVG 421
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
++LI Y+K G ++ A I EQ +++ +
Sbjct: 422 SSLIDMYSKSGSLDDALMIFEQ---------------------------------IKEPN 448
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV WT+M+ G +G K+A+ LF M+ G PN T +L+ S + ++ G + +
Sbjct: 449 VVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCR-YF 507
Query: 437 SALRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++ + V + +++ +Y +AG++ A+ T W S + + H
Sbjct: 508 RMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLH 565
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 217/461 (47%), Gaps = 50/461 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S L S T++G + + +H K G +N N LL +Y K + A +FD + K
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
N +W +++S ARA AG S+ +F M
Sbjct: 97 NTQTWTILIS--------GFARA-----------------AGSSE-----LVFSLFREMQ 126
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
D + P+++TL+S L C+ ++ GK IHA+I+R + N+++ Y K
Sbjct: 127 ADGAC-PNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEF 185
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E A+ E + +V+++ ++ Y++ GD+ + +F + ++DVV+W ++ G Q
Sbjct: 186 EYAESFFEL--MIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQ 243
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G + A+E MV G + + T S L + SSL+ ++ G+Q+H L G S +
Sbjct: 244 CGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYI 303
Query: 450 SNALITMYSKAGNINAARRVFNLI---------------HWRQETVSWTSMIVALAQHGL 494
++L+ MY K G ++ A + + + VSW+SM+ +G
Sbjct: 304 RSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGK 363
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
E+ ++ F M+ I D T +++AC + G++E G++ + ++ + ++ +
Sbjct: 364 YEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKI-GLRIDAYVGS 422
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
S++D+ ++G L +A E + EP+VV W S++S C +H
Sbjct: 423 SLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALH 462
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/738 (36%), Positives = 403/738 (54%), Gaps = 75/738 (10%)
Query: 54 LMNFYAKTESISYAKKVFDEMPVK----TLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
L+N AK +S+ +A ++ ++ +L + NT+L YAK G + +FN P+
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 110 S--VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+ V+WTT+I + + A+ F M + P FT +++L +C LS G+++
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H+ + K V +LL+MYAK G ++A+ VFD
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFD----------------------- 259
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+M R++V+WNSMI G+ +N A+G+F +L SL PD+ +++S LSA
Sbjct: 260 --------EMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVL---SLGPDQVSISSVLSA 308
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
CA L +L GKQ+H I++ G VG +
Sbjct: 309 CAGLVELDFGKQVHGSIVKR-----GLVGLVYVK-------------------------- 337
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
+L+D Y K G A ++F DRDVV W M++G + + A F++M+REG
Sbjct: 338 --NSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREG 395
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
+P+ + S++ S+S+A+L G IH+ L++G + +S++L+TMY K G++ A
Sbjct: 396 VEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAY 455
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+VF V WT+MI QHG EAI+LFE ML G+ P++IT+V VL+AC+H
Sbjct: 456 QVFRETK-EHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHT 514
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G ++ G +Y+N M NVH IKP H+A MVDLLGR G L+EA FIE+MP EPD + WG+
Sbjct: 515 GKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGA 574
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LL AC H N+++G+ AE+L +EPDN G Y L N+Y G E+A +R+ M GV
Sbjct: 575 LLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGV 634
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
+K G SW+ ++N+ VF D H + IY + K+ + IK G+V +T + VE
Sbjct: 635 RKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEG 694
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
+EQ L HSEKLA+AFGL+ P + +RI KNLR C DCH+ +KF ++ REI+VRD
Sbjct: 695 S-EEQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRD 753
Query: 768 ATRFHHFKKGLCSCRDYW 785
RFH F G CSC DYW
Sbjct: 754 INRFHRFTNGSCSCMDYW 771
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 223/497 (44%), Gaps = 78/497 (15%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWN- 83
+S PF R+ G++ + F ++++ A +S +++ + C N
Sbjct: 177 RSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI--HALIHKHCFLND 234
Query: 84 -----TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+L YAK G + LA VF+ MP+R+ VSW ++IV + + + AI +F E++
Sbjct: 235 PFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLS 294
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P Q +++SVL++C L +L GK+VH +VK GL G V V NSL++MY K G
Sbjct: 295 --LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFED 352
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A +F G ++V +WNV++ + A F MI V
Sbjct: 353 ATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGV---------------- 396
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
+PD+ + +S A A++ L G IH+++++T + ++
Sbjct: 397 ----------------EPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSS 440
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L++ Y K G ++LD Y ++F ++ +VV
Sbjct: 441 LVTMYGKCG-----------------------SMLDAY----------QVFRETKEHNVV 467
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHAS 437
WTAM+ + Q+G +A++LF M+ EG P T ++LS S +D G K ++
Sbjct: 468 CWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSM 527
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A L ++ + + G + A R + + +++ W +++ A +H E
Sbjct: 528 ANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEM 587
Query: 498 AIQLFERMLELGIKPDH 514
++ ER+ +L +PD+
Sbjct: 588 GREVAERLFKL--EPDN 602
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 49/285 (17%)
Query: 397 VELFRSMVREGPKPNNYT----LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
++LF S PK + ++ L +L+ ++ L SL H QIH+ + + +SL+ N
Sbjct: 78 LQLFTSYQSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINT 137
Query: 453 LITMYSKAGNINAARRVFNLI-HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
L+ +Y+K G+I+ +FN H V+WT++I L++ +A+ F RM GI
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIY 197
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+H T+ +L AC H L+ +GQ+ + ++ H P +++D+ + G + A N
Sbjct: 198 PNHFTFSAILPACAHAALLSEGQQIHALIHK-HCFLNDPFVATALLDMYAKCGSMLLAEN 256
Query: 572 FIENMP--------------------------------LEPDVVAWGSLLSACRVHKNLD 599
+ MP L PD V+ S+LSAC LD
Sbjct: 257 VFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELD 316
Query: 600 LGK-----IAAEKLL-LIEPDNSGAYSALCNLYSSCGKWEDAANI 638
GK I L+ L+ NS L ++Y CG +EDA +
Sbjct: 317 FGKQVHGSIVKRGLVGLVYVKNS-----LVDMYCKCGLFEDATKL 356
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/755 (36%), Positives = 431/755 (57%), Gaps = 52/755 (6%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+L R + +V N+ + + + +I A+ FD MP++T S+N +++ Y +
Sbjct: 2 RLPSVRFLPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRN 61
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
D A +F+ MP+RD S+ +I + R + + P+ + TS+L
Sbjct: 62 HLPDAALGLFHRMPSRDLGSYNALIAGLSL--RRHTLPDAAAALASIPLPPSVVSFTSLL 119
Query: 153 ASCTALGDLS-AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
G L+ A + H + ++ V LL + G A+ +FD M K+V
Sbjct: 120 RGYVRHGLLADAIRLFHQMPERNHVTYTV-----LLGGFLDAGRVNEARKLFDEMPDKDV 174
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+ ++S + +GR+ ARA FD+M +R+VV+W +MI+GY+QNG A +F M
Sbjct: 175 VARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVM--- 231
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
PD+ ++ T A++ Y + G VE
Sbjct: 232 ----PDRNEVSWT---------------------------------AMLVGYIQAGHVED 254
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+ + + + V A ++ G+ + G + A+ +F+ + RD W+AM+ YEQN
Sbjct: 255 AEDLF--NAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNE 312
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+A+ FR M+ G +PN + ++L+V ++LA+ D+G+++HA+ LR + + +
Sbjct: 313 FLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVS 372
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
ALITMY K GN++ A+RVFN+ ++ V W SMI AQHGLGEEA+ +F+ + +
Sbjct: 373 ALITMYIKCGNLDKAKRVFNMFE-PKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMA 431
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD ITY+GVLTAC++ G V++G+ +N M I+ +H++ MVDLLGRAGL+ EA +
Sbjct: 432 PDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALD 491
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I NMP+EPD + WG+L+ ACR+HKN ++ ++AA+KLL +EP ++G Y L ++Y+S G+
Sbjct: 492 LINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGR 551
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL-HPQRDAIYNKMAKIWDEIK 690
WEDA+++RK + + K+ G SW++ VH+F D L HP+ I N + ++ +
Sbjct: 552 WEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLM 611
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+ D + VLHDV+E+ K Q LR+HSE+ A+A+GL+ P +R+MKNLRVC DCHS
Sbjct: 612 ESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHS 671
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
AIK I K+ REI++RDA RFHHFK GLCSCRDYW
Sbjct: 672 AIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN S IS L A L ++ G+ +HA +++C VF ++L+ Y K +
Sbjct: 331 PNYTSFISILTVCAALATADY-------GRELHAAMLRCSFDTDVFAVSALITMYIKCGN 383
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN------LMPNRDSVSWTTII 117
+ AK+VF+ K + WN++++ YA+ G + A +F+ + P D +++ ++
Sbjct: 384 LDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAP--DGITYIGVL 441
Query: 118 VTYNEIGRFKNAIRMFVEM 136
+ G+ K +F M
Sbjct: 442 TACSYTGKVKEGREIFNSM 460
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 260/687 (37%), Positives = 406/687 (59%), Gaps = 37/687 (5%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A VF + + +SW T+I + +A+ ++V M+ + P +T + S
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C GK++H+ ++K GL+ ++V SL++MYA+ G A VFD ++V S+
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+++ + G +D A+ FD++ +DVV+WN+MI+GY++ G EAL +F M+K +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK-MDV 206
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
KPD+ T+A+ LS C + ++LG+QIH++I F + + NALI Y+
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYS---------- 256
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
K G++ A +F+ L+ +DV++W ++ GY +K
Sbjct: 257 -----------------------KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHK 293
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS--GEASSLSVSNA 452
+A+ +F+ M++ G PN+ T+ ++L + L ++D G+ IH + G ++ S+ +
Sbjct: 294 EALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTS 353
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MY+K GNI AA +VF+ I + S +MI A HG + A L RM + GI+P
Sbjct: 354 LIDMYAKCGNIEAANQVFDTI-LNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEP 412
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D IT+VG+L+AC+H GL + G++ + M ++I+P H+ M+DLLGR+GL +EA
Sbjct: 413 DDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEEL 472
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I +M +EPD V WGSLL AC++HKNL+LG++ A+KL+ IEP N G+Y L N+Y++ +W
Sbjct: 473 INSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARW 532
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+D A +R + G+KK G S ++I + VH F + D HPQ IY + +I + E
Sbjct: 533 DDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAET 592
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
GFV DT+ VL ++EE++KE L +HSEKLAIAFGLIST T LRI+KNLRVC +CH A
Sbjct: 593 GFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHEAT 652
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLC 779
K I K+ REI+ RD +RFHHFK G+C
Sbjct: 653 KLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 237/490 (48%), Gaps = 75/490 (15%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+SP + + L +S KS+ GK +HA+I+K GL + + + SL++ YA+ + A
Sbjct: 74 LSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAH 133
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
KVFD + + S+ +++ YA +G +D A ++F+ +P +D VSW +I Y EIGR+K
Sbjct: 134 KVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKE 193
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ +F EM++ V P + T+ +VL++CT G++ G+++HS++ G + + N+L++
Sbjct: 194 ALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALID 253
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+Y+K G+ A +F+G++ K+V SW N++
Sbjct: 254 LYSKCGEMERAHGLFEGLQYKDVISW-------------------------------NTL 282
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I GY+ + EAL +F MLK P+ T+ S L ACA+L + +G+ IH YI +
Sbjct: 283 IGGYAYINHHKEALLVFQEMLKLGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK- 340
Query: 309 FDATGPVGN-----ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
G + N +LI YAK G +E
Sbjct: 341 --LKGIITNTSLQTSLIDMYAKCGNIE--------------------------------- 365
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A ++FD++ ++ + + AM+ G+ +G A +L M ++G +P++ T +LS S
Sbjct: 366 AANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACS 425
Query: 424 SLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
D G++I S L L +I + ++G A + N + + V W
Sbjct: 426 HAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIW 485
Query: 483 TSMIVALAQH 492
S++ A H
Sbjct: 486 GSLLKACKIH 495
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 40/168 (23%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIK--CGLHLSVFLKNSLMNFYA 59
ETPN +++S L AHL + +G+ +H I K G+ + L+ SL++ YA
Sbjct: 307 ETPNDVTMLSILPACAHLGAID-------IGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
K +I A +VFD + K+L S N ++ +A GR D A F+L+
Sbjct: 360 KCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAA---FDLLS------------- 403
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
M +D + P T +L++C+ G G+K+
Sbjct: 404 ---------------RMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/711 (36%), Positives = 409/711 (57%), Gaps = 55/711 (7%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YA+ GR++ A +F + +D VSW T+I + ++ RF+ A+ M+ D V
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKA 201
P T+ SVL +C+ L L G+++H + ++ G L V +L++MY +
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFDG+ + R V WN+++AGY++N +D +A
Sbjct: 592 VFDGV-------------------------------VRRTVAVWNALLAGYARNEFDDQA 620
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M+ +S P+ T AS L AC + + IH YI++ F V NAL+
Sbjct: 621 LRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMD 680
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+++G VEI++ I + ++ +++++ T++ G I G A + ++ R +
Sbjct: 681 MYSRMGRVEISKTIFGR--MNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGS 738
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
V YE +G V KPN+ TL +L ++LA+L GK+IHA A++
Sbjct: 739 DTFVDYEDDG----GVPF---------KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQ 785
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
A ++V +AL+ MY+K G +N A RVF+ + R ++W +I+A HG GEEA++L
Sbjct: 786 KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRN-VITWNVLIMAYGMHGKGEEALEL 844
Query: 502 FERMLELG------IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
F M G I+P+ +TY+ + AC+H G+V++G ++ MK H ++P H+A
Sbjct: 845 FRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYAC 904
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVV-AWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGR+G ++EAY I MP + V AW SLL ACR+H++++ G+IAA+ L ++EP+
Sbjct: 905 LVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPN 964
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+ Y + N+YSS G W+ A +RK MK +GV+K G SW++ ++VH F D HPQ
Sbjct: 965 VASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQ 1024
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
++ + + +++ G+VPD + VLH+V+++ KE ML HSE+LAIAFGL++TP T
Sbjct: 1025 SKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGT 1084
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLRVCNDCH A K I K+VDREI++RD RFHHF G CSC DYW
Sbjct: 1085 TIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 245/546 (44%), Gaps = 90/546 (16%)
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
F P ++ N++++ Y K G L A +VF+ +P+RD VSW ++I T ++ ++
Sbjct: 359 FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSL 418
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTG-LSGCVNVTNSLLN 188
+F M+ + V PT FT+ SV +C+ + G + GK+VH++ ++ G L N N+L+
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTN--NALVT 476
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYA++G AKA+F K++ SWN V+S
Sbjct: 477 MYARLGRVNDAKALFGVFDGKDLVSWNTVIS----------------------------- 507
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
SQN EAL M+ ++ ++PD TLAS L AC+ LE+L++G++IH Y +R
Sbjct: 508 --SLSQNDRFEEAL-MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRN- 563
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
++E S + T L+D Y R +
Sbjct: 564 ------------------------GDLIENSFVG-------TALVDMYCNCKQPKKGRLV 592
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLAS 427
FD + R V W A+L GY +N + A+ LF M+ E PN T +++L
Sbjct: 593 FDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKV 652
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ IH ++ G V NAL+ MYS+ G + ++ +F ++ +++ VSW +MI
Sbjct: 653 FSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN-KRDIVSWNTMIT 711
Query: 488 ALAQHGLGEEAIQLFERMLE------------------LGIKPDHITYVGVLTACTHGGL 529
G ++A+ L M + KP+ +T + VL C
Sbjct: 712 GCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAA 771
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ +G+ + K+ + +++VD+ + G L A + MP+ +V+ W L+
Sbjct: 772 LGKGKEIHAYAVK-QKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLI 829
Query: 590 SACRVH 595
A +H
Sbjct: 830 MAYGMH 835
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 224/503 (44%), Gaps = 86/503 (17%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
R W ++ + F++AI + M+ P F +VL + A+ DL GK++
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 168 HSFVVKTGLS--GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
H+ V K G + V V NSL+NMY K GD A+ VFD
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFD--------------------- 391
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE----ALGMFANMLKDSSLKPDKFTL 281
+ +RD V+WNSMIA + FE +L +F ML + ++ P FTL
Sbjct: 392 ----------DIPDRDHVSWNSMIATLCR----FEEWELSLHLFRLMLSE-NVDPTSFTL 436
Query: 282 ASTLSACANLE-KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
S AC+++ ++LGKQ+HAY +R D NAL++ YA++G V A+
Sbjct: 437 VSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAK------- 488
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
A + DG +D+V+W ++ QN ++A+
Sbjct: 489 -------ALFGVFDG-------------------KDLVSWNTVISSLSQNDRFEEALMYV 522
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS-VSNALITMYSK 459
M+ +G +P+ TL+++L S L L G++IH ALR+G+ S V AL+ MY
Sbjct: 523 YLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCN 582
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-ELGIKPDHITYV 518
R VF+ + R+ W +++ A++ ++A++LF M+ E P+ T+
Sbjct: 583 CKQPKKGRLVFDGV-VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFA 641
Query: 519 GVLTACTHGGLV--EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
VL AC + ++G Y + + K K + M +GR + + + +
Sbjct: 642 SVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKR 701
Query: 577 PLEPDVVAWGSLLSACRVHKNLD 599
D+V+W ++++ C V D
Sbjct: 702 ----DIVSWNTMITGCIVCGRYD 720
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 27/254 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H I+K G +++N+LM+ Y++ + +K +F M + + SWNT+++ GR
Sbjct: 659 IHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGR 718
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIG--RFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
D A + + M R + V Y + G FK P T+ +VL
Sbjct: 719 YDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFK---------------PNSVTLMTVL 763
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
C AL L GK++H++ VK L+ V V ++L++MYAK G +A VFD M ++NV
Sbjct: 764 PGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVI 823
Query: 213 SWNVVVSLHIHSGRLDLARAQF----------DQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+WNV++ + G+ + A F ++I + VT+ ++ A S +G E L
Sbjct: 824 TWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGL 883
Query: 263 GMFANMLKDSSLKP 276
+F M ++P
Sbjct: 884 HLFHTMKASHGVEP 897
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA +K L + V + ++L++ YAK ++ A +VFD+MP++ + +WN ++ AY
Sbjct: 775 GKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGM 834
Query: 92 QGRLDLACEVFNLM-----PNRD-----SVSWTTIIVTYNEIGRFKNAIRMFVEM 136
G+ + A E+F +M NR+ V++ I + G + +F M
Sbjct: 835 HGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTM 889
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 276/768 (35%), Positives = 428/768 (55%), Gaps = 99/768 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + +K + +G+ VH +K GL L + + NSL+N Y K +A+ V
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV-------- 372
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
F+ M RD +SW ++I + G A+ +F+++++
Sbjct: 373 -----------------------FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 139 DQVLPTQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+ P Q+T+TSVL + ++L + LS K+VH +K V+ +L++ Y++
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ +F+ R FD +V WN+M+AGY+Q+
Sbjct: 470 EAEILFE--------------------------RHNFD------LVAWNAMMAGYTQSHD 497
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+ L +FA M K + D FTLA+ C L + GKQ+HAY I++ +D
Sbjct: 498 GHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD------- 549
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
L++ + +LD Y+K GD+ A+ FDS+ D
Sbjct: 550 --------------------------LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
VAWT M+ G +NG + A +F M G P+ +T++ + SS L +L+ G+QIHA+
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
AL+ + V +L+ MY+K G+I+ A +F I T +W +M+V LAQHG G+E
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT-AWNAMLVGLAQHGEGKE 702
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
+QLF++M LGIKPD +T++GVL+AC+H GLV + ++ M + IKP H++ +
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
D LGRAGL+++A N IE+M +E + +LL+ACRV + + GK A KLL +EP +S
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY L N+Y++ KW++ R MK VKK GFSW++++NK+H+F V+D + Q +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ + +IK+ G+VP+T L DVEE+ KE+ L +HSEKLA+AFGL+STP +T +R
Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++KNLRVC DCH+A+K+I K+ +REIV+RDA RFH FK G+CSC DYW
Sbjct: 943 VIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 176/641 (27%), Positives = 296/641 (46%), Gaps = 118/641 (18%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L+ L S + + H K GL F+ +L+N Y K + K +F+EMP +
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 79 LCSWNTILSAYAKQG----RLDLACEVFN--LMPNR------------------------ 108
+ WN +L AY + G +DL+ + L PN
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFAN 270
Query: 109 --DSVSWTTIIV------TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
D+ S + II Y G++ ++ F +MV+ V Q T +LA+ +
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
L+ G++VH +K GL + V+NSL+NMY K+
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR-------------------------- 364
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
+ AR FD M ERD+++WNS+IAG +QNG + EA+ +F +L+ LKPD++T
Sbjct: 365 -----KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYT 418
Query: 281 LASTLSACANL-EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
+ S L A ++L E L L KQ+H + I+ + V ALI Y++ ++ A+ + E+
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
D+VAW AM+ GY Q+ ++L
Sbjct: 479 NF----------------------------------DLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M ++G + +++TL+ + L +++ GKQ+HA A++SG L VS+ ++ MY K
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVK 564
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G+++AA+ F+ I + V+WT+MI ++G E A +F +M +G+ PD T
Sbjct: 565 CGDMSAAQFAFDSIP-VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMP 577
+ A + +EQG++ + N K+ T F S+VD+ + G + +AY + +
Sbjct: 624 LAKASSCLTALEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 578 LEPDVVAWGSLLSACRVH----KNLDLGKIAAEKLLLIEPD 614
+ ++ AW ++L H + L L K K L I+PD
Sbjct: 681 M-MNITAWNAMLVGLAQHGEGKETLQLFK--QMKSLGIKPD 718
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 159/614 (25%), Positives = 287/614 (46%), Gaps = 105/614 (17%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
L++ + S + +GK HARI+ + FL N+L++ Y+K S++YA++VFD+MP +
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
L SWN+IL+AYA+ C V N+ + A +F + Q
Sbjct: 105 LVSWNSILAAYAQSSE----CVVENI----------------------QQAFLLFRILRQ 138
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
D V ++ T++ +L C G + A + H + K GL G V +L+N+Y K G
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSG----RLDLARAQFD----------QMIER---- 240
K +F+ M ++V WN+++ ++ G +DL+ A +++ R
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD 258
Query: 241 --------------------DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
+++ N ++ Y +G L FA+M+ +S ++ D+ T
Sbjct: 259 DSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVECDQVT 317
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L+ ++ L LG+Q+H ++ D V N+LI+ Y
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC---------------- 361
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
K+ G AR +FD++ +RD+++W +++ G QNGL +AV LF
Sbjct: 362 -----------------KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLAS-LDHGKQIHASALRSGEASSLSVSNALITMYSK 459
++R G KP+ YT++++L +SSL L KQ+H A++ S VS ALI YS+
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+ A +F ++ + V+W +M+ Q G + ++LF M + G + D T
Sbjct: 465 NRCMKEAEILFERHNF--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 520 VLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
V C + QG++ + +K+ + + S + ++D+ + G + A +++P+
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 579 EPDVVAWGSLLSAC 592
PD VAW +++S C
Sbjct: 581 -PDDVAWTTMISGC 593
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/758 (35%), Positives = 425/758 (56%), Gaps = 71/758 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMN---FYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ + + YA VFD + L WNT+ +
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A++++V MV +LP +T
Sbjct: 79 AL---------------SSDPVS----------------ALKLYVCMVSLGLLPNSYTFP 107
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L SC G+++H V+K G + + SL++MY + G A+ V D +
Sbjct: 108 FLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHR 167
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ +++ + G ++ A FD++ +DVV+WN+ I+GY++ G EAL +F M+
Sbjct: 168 DVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMM 227
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K ++++PD+ T+ + LSACA ++LG+Q+H++I F + NALI Y+K
Sbjct: 228 K-TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKC--- 283
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
G++ A +F L ++DV++W ++ GY
Sbjct: 284 ------------------------------GELETACGLFQGLSNKDVISWNTLIGGYTH 313
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G KPN+ T+ ++LS + L ++D G+ IH + G ++
Sbjct: 314 MNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNAS 373
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S+ +LI MY+K G+I AA++VF+ + R + SW +MI A HG A +F RM +
Sbjct: 374 SLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS-SWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI+PD IT+VG+L+AC+H G+++ G+ + M +K+ P H+ M+DL G +GL +
Sbjct: 433 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFK 492
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I M +EPD V W SLL AC++H N++LG+ A+ L+ IEP+N G+Y L N+Y+
Sbjct: 493 EAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYA 552
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ +W + A R + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 553 TAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++E GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 613 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 672
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH A K I K+ REI+ RD TRFHHF+ G CSC DYW
Sbjct: 673 CHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 235/491 (47%), Gaps = 71/491 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS G+ +H +++K G L +++ SL++ Y + + A+KV D+
Sbjct: 106 FPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSS 165
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G ++ A ++F+ +P +D VSW I Y E G +K A+ +F +
Sbjct: 166 HRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKK 225
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +VL++C G + G++VHS++ G + + N+L+++Y+K G+
Sbjct: 226 MMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGE 285
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F G+ K+V SW N++I GY+
Sbjct: 286 LETACGLFQGLSNKDVISW-------------------------------NTLIGGYTHM 314
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT--G 313
EAL +F +ML+ S KP+ T+ S LSACA+L + +G+ IH YI + T
Sbjct: 315 NLYKEALLLFQDMLR-SGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNAS 373
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +LI YAK G +E AQ+ +FDS+
Sbjct: 374 SLRTSLIDMYAKCGDIEAAQQ---------------------------------VFDSML 400
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+R + +W AM+ G+ +G A ++F M + G +P++ T +LS S LD G+
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRH 460
Query: 434 IHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
I S R + L +I + +G A ++ N + + V W S++ A H
Sbjct: 461 IFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMH 520
Query: 493 G---LGEEAIQ 500
G LGE Q
Sbjct: 521 GNVELGESYAQ 531
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 237/488 (48%), Gaps = 70/488 (14%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L C L L + +H+ ++KTGL TN L +K+ + + FDG
Sbjct: 7 SLLHXCKTLQSL---RIIHAQMIKTGLHN----TNYAL---SKLLEXCVLSPHFDG---- 52
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
L A + FD + E ++ WN+M G++ + AL ++ M+
Sbjct: 53 -----------------LPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMV 95
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
L P+ +T L +CA K G+Q+H +++ FD + +LIS Y + G +
Sbjct: 96 -SLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRL 154
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E AQK+ ++S S+ +V+++T L+ GY G I A ++FD + +DVV+W A + GY +
Sbjct: 155 EDAQKVXDKS--SHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAE 212
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G K+A+ELF+ M++ +P+ T+ +LS + S++ G+Q+H+ G +L +
Sbjct: 213 TGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKI 272
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI +YSK G + A +F + ++ +SW ++I L +EA+ LF+ ML G
Sbjct: 273 VNALIDLYSKCGELETACGLFQGLS-NKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSG 331
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQE 568
KP+ +T + +L+AC H G ++ G+ + + K + + S S++D+ + G ++
Sbjct: 332 EKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 391
Query: 569 AYNFIENM----------------------------------PLEPDVVAWGSLLSACRV 594
A ++M +EPD + + LLSAC
Sbjct: 392 AQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH 451
Query: 595 HKNLDLGK 602
LDLG+
Sbjct: 452 SGMLDLGR 459
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 274/756 (36%), Positives = 416/756 (55%), Gaps = 98/756 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H +++ GL V + N L+N Y KT S+S A+
Sbjct: 924 LGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRART--------------------- 962
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VF M D VSW T+I G + ++ MFV++++ +LP QFTV S
Sbjct: 963 ----------VFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVAS 1012
Query: 151 VLASCTAL-GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL +C++L G ++H+ +K G+ V+ +L+++Y+K
Sbjct: 1013 VLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSK----------------- 1055
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
SG+++ A F D+ +WN+M+ GY +G +AL ++ ++
Sbjct: 1056 --------------SGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYI-LM 1100
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++S + ++ TLA+ A L LK GKQI A +++ F+
Sbjct: 1101 QESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFN------------------- 1141
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
L++ + +LD Y+K G++ ARRIF+ + D VAWT M+ G +
Sbjct: 1142 --------------LDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVE 1187
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG + A+ + M +P+ YT + ++ S L +L+ G+QIHA+ ++ A V
Sbjct: 1188 NGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV 1247
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+L+ MY+K GNI AR +F + SW +MIV LAQHG EEA+Q FE M G
Sbjct: 1248 MTSLVDMYAKCGNIEDARGLFKRTN-TSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRG 1306
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+ PD +T++GVL+AC+H GLV + + M+ ++ I+P H++ +VD L RAG ++EA
Sbjct: 1307 VTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREA 1366
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
I +MP E + +LL+ACRV + + GK AEKLL +EP +S AY L N+Y++
Sbjct: 1367 EKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAA 1426
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
+WE+ A+ R M+ VKK GFSWV ++NKVH+F D H + D IYNK+ I I
Sbjct: 1427 NQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRI 1486
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+E G++PDT L DVEE+ KE L +HSEKLAIA+GL+ TP +TTLR++KNLRVC DCH
Sbjct: 1487 REEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCH 1546
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+AIK+I K+ +RE+V+RDA RFHHF+ G+CSC DYW
Sbjct: 1547 NAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 196/721 (27%), Positives = 315/721 (43%), Gaps = 156/721 (21%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
P LI + + +L+ + + + +GK HARI+ G H FL N+L+ Y+K S+S
Sbjct: 619 PAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLS 678
Query: 66 YAKKVFDEMP--VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
A+K+FD P + L +WN ILSA+A + R + F+L
Sbjct: 679 SARKLFDTTPDTSRDLVTWNAILSAHADKAR-----DGFHL------------------- 714
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F+ R FV T+ T+ V C SA + +H + VK GL V V
Sbjct: 715 --FRLLRRSFVS-------ATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVA 765
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG-----------------R 226
+L+N+YAK G A+ +FDGM L++V WNV++ ++ +G R
Sbjct: 766 GALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLR 825
Query: 227 LD------LARA----------QFDQM--------------IERDVVTWNSMIAGYSQNG 256
D LAR Q Q+ DV+ WN ++ + Q G
Sbjct: 826 PDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRG 885
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+EA+ F +M+ +S + D T LS A L L+LGKQIH ++R+ D VG
Sbjct: 886 ETWEAVDCFVDMI-NSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVG 944
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI+ Y K G V AR +F + + D
Sbjct: 945 NCLINMYVKTGSVS---------------------------------RARTVFWQMNEVD 971
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH-GKQIH 435
+V+W M+ G +GL + +V +F ++R G P+ +T++++L SSL H QIH
Sbjct: 972 LVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIH 1031
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A A+++G VS LI +YSK+G + A +F + + SW +M+ G
Sbjct: 1032 ACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLF-VNQDGFDLASWNAMMHGYIVSGDF 1090
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV--EQG--------QRYYNM------ 539
+A++L+ M E G + + IT A GGLV +QG +R +N+
Sbjct: 1091 PKALRLYILMQESGERANQITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLDLFVIS 1148
Query: 540 -----------MKNVHKI---KPTPSHFA--SMVDLLGRAGLLQEA---YNFIENMPLEP 580
M++ +I P+P A +M+ G + A Y+ + ++P
Sbjct: 1149 GVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQP 1208
Query: 581 DVVAWGSLLSACRVHKNLDLGK-IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
D + +L+ AC + L+ G+ I A + L + ++L ++Y+ CG EDA +
Sbjct: 1209 DEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1268
Query: 640 K 640
K
Sbjct: 1269 K 1269
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 261/711 (36%), Positives = 417/711 (58%), Gaps = 21/711 (2%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++TL N +L+ YAK + A ++F+ +P R++ +WT +I + G + +F E
Sbjct: 321 LQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFRE 380
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M P Q+T++SVL C+ +L GK VH+++++ G+ V + NS+L++Y K
Sbjct: 381 MQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKV 440
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +F+ M +V SWN+++ ++ +G ++ + F ++ +DVV+WN+++ G Q
Sbjct: 441 FEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQC 500
Query: 256 GYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
GY+ AL M++ + F++A L++ +L ++LG+Q+H +++ FD+ G
Sbjct: 501 GYERHALEQLYCMVECGTEFSAVTFSIALILAS--SLSHVELGRQLHGMVLKFGFDSDGF 558
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ ++L+ Y K G ++ A I+ + L G ++ P I
Sbjct: 559 IRSSLVEMYCKCGRMDKASIILRD--------VPLDVLRKGNARVSYKEPKAGI------ 604
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
V+W +M+ GY NG +D ++ FR MVRE + T++ ++S ++ L+ G+ +
Sbjct: 605 ---VSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHV 661
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA + G V ++LI MYSK+G+++ A VF + V WTSMI A HG
Sbjct: 662 HAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSN-EPNIVMWTSMISGYALHGQ 720
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G AI LFE ML GI P+ +T++GVL AC+H GL+E+G RY+ MMK+ + I P H
Sbjct: 721 GMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCT 780
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
SMVDL GRAG L + NFI + W S LS+CR+HKN+++GK +E LL + P
Sbjct: 781 SMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPS 840
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+ GAY L N+ +S +W++AA +R M GVKK G SW+Q+++++H F + D HPQ
Sbjct: 841 DPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQ 900
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
D IY+ + + +KE+G+ D V+ DVEE+ E ++ HHSEKLA+ FG+I+T T
Sbjct: 901 DDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRT 960
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLR+C DCH+ IK+ +L+DREI+VRD RFHHFK G CSC DYW
Sbjct: 961 PIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/553 (24%), Positives = 250/553 (45%), Gaps = 65/553 (11%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L+ + L +NL+ +GK VHA +++ G+ + V L NS+++ Y K +
Sbjct: 388 PNQYTLSSVLKCCS--LDNNLQ-----LGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKV 440
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
YA+++F+ M + SWN ++ AY + G ++ + ++F +P +D VSW TI+ +
Sbjct: 441 FEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQC 500
Query: 124 GRFKNAIRMFVEMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
G ++A+ MV+ + F++ +LAS +L + G+++H V+K G
Sbjct: 501 GYERHALEQLYCMVECGTEFSAVTFSIALILAS--SLSHVELGRQLHGMVLKFGFDSDGF 558
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ +SL+ MY K G A + + L + N AR + + +
Sbjct: 559 IRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGN--------------ARVSYKEP-KAG 603
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+W SM++GY NG + L F M+++ + D T+ + +SACAN L+ G+ +H
Sbjct: 604 IVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVV-VDIRTVTTIISACANAGILEFGRHVH 662
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
AY+ + VG++LI Y+K G ++ A + QS
Sbjct: 663 AYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQS---------------------- 700
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ ++V WT+M+ GY +G A+ LF M+ +G PN T +L+
Sbjct: 701 -----------NEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNA 749
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQET 479
S ++ G + + ++ + V + +++ +Y +AG++ + T
Sbjct: 750 CSHAGLIEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLT 808
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
W S + + H E + E +L++ D YV + C ++ R ++
Sbjct: 809 SVWKSFLSSCRLHKNVEMGKWVSEMLLQVA-PSDPGAYVLLSNMCASNHRWDEAARVRSL 867
Query: 540 MKNVHKIKPTPSH 552
M +K P
Sbjct: 868 MHQ-RGVKKQPGQ 879
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/771 (34%), Positives = 419/771 (54%), Gaps = 99/771 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LQ+ S +G +HA I+K G L V++ N+L+ Y + F +MP
Sbjct: 163 FAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVR----------FGKMP 212
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ +F + +D V+W +++ + + G + A+ F +
Sbjct: 213 EAAV---------------------IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYD 251
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ + P Q ++ S++ + LG L GK++H++ +K G + V N+L++MYAK
Sbjct: 252 LQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKC-- 309
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ GR FD M +D+++W + AGY+QN
Sbjct: 310 -----------------------CCMSYGGR------AFDLMAHKDLISWTTAAAGYAQN 340
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+AL + L+ + D + S L AC L L K+IH Y IR
Sbjct: 341 KCYLQALELL-RQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIR--------- 390
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GG+ + + T++D Y + G I A RIF+S+ +
Sbjct: 391 -----------GGLS--------------DPVLQNTIIDVYGECGIIDYAVRIFESIECK 425
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVV+WT+M+ Y NGL A+E+F SM G +P+ TL ++LS SL++L GK+IH
Sbjct: 426 DVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIH 485
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+R G S+SN L+ MY++ G++ A ++F R + WT+MI A HG G
Sbjct: 486 GFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRN-LILWTAMISAYGMHGYG 544
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
E A++LF RM + I PDHIT++ +L AC+H GLV +G+ + +MK ++++P P H+
Sbjct: 545 EAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTC 604
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VDLLGR L+EAY +++M EP W +LL ACR+H N ++G++AAEKLL ++ DN
Sbjct: 605 LVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDN 664
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G Y + N++++ G+W+D +R MK G+ K G SW+++ NK+H F D LHP+
Sbjct: 665 PGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPEC 724
Query: 676 DAIYNKMAKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
D IY K+A++ +++K E G+V T VLH+V E+ K QML HSE+LAIA+GL++T E T
Sbjct: 725 DKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGT 784
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCHS + + +RE++VRDA+RFHHFK G+CSC D+W
Sbjct: 785 PIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 152/578 (26%), Positives = 256/578 (44%), Gaps = 109/578 (18%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y K G + A +F+ M R +W ++ Y G A+ M+ EM V +T
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+L +C + DL G ++H +K G V V NSL+ +YAK D A+ +FD M +
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 209 KN-VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT----------------------- 244
+N V SWN ++S + +G A F +M++ VVT
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 245 ----------------WNSMIAGYSQNGYDFEALGMFANM-------------------- 268
N+++A Y + G EA +F N+
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241
Query: 269 ----------LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
L+++ LKPD+ ++ S + A L L GK+IHAY I+ FD+ VGN
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNT 301
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI YAK +SY R FD + +D++
Sbjct: 302 LIDMYAKC------------CCMSY---------------------GGRAFDLMAHKDLI 328
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+WT GY QN A+EL R + EG + + ++L L L K+IH
Sbjct: 329 SWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYT 388
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+R G + + + N +I +Y + G I+ A R+F I + + VSWTSMI +GL +A
Sbjct: 389 IRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECK-DVVSWTSMISCYVHNGLANKA 446
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMV 557
+++F M E G++PD++T V +L+A +++G+ + +++ ++ + S+ ++V
Sbjct: 447 LEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLV 504
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
D+ R G +++AY I +++ W +++SA +H
Sbjct: 505 DMYARCGSVEDAYK-IFTCTKNRNLILWTAMISAYGMH 541
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 227/551 (41%), Gaps = 122/551 (22%)
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY K G + A+ +FD M +++ +W N+M
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTW-------------------------------NAM 29
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
+ GY NG AL M+ M + + D +T L AC +E L G +IH I+
Sbjct: 30 MGGYVSNGEALGALEMYREM-RHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYG 88
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
D+ V N+L++ YAK DI AR++
Sbjct: 89 CDSFVFVVNSLVALYAKC---------------------------------NDINGARKL 115
Query: 369 FDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
FD + R DVV+W +++ Y NG+ +A+ LF M++ G N YT +A L +
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ G QIHA+ L+SG + V+NAL+ MY + G + A +F + + + V+W SM+
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK-DIVTWNSMLT 234
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY---------- 537
Q+GL EA++ F + +KPD ++ + ++ A G + G+ +
Sbjct: 235 GFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDS 294
Query: 538 -----NMMKNVHKIKPTPSHFASMVDLLGRAGLLQ---------------EAYNFIENMP 577
N + +++ S+ DL+ L+ +A + +
Sbjct: 295 NILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQ 354
Query: 578 LEP---DVVAWGSLLSACRVHKNLD-LGKIAAEKLLLIEPDNSGAY--SALCNLYSSCGK 631
+E D GS+L ACR L+ LGKI I S + + ++Y CG
Sbjct: 355 MEGMDVDATMIGSILLACR---GLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGI 411
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
+ A I +S++ V SW + + ++H + + NK +++ +KE
Sbjct: 412 IDYAVRIFESIECKDV-----VSWTSM--------ISCYVH---NGLANKALEVFSSMKE 455
Query: 692 MGFVPDTASVL 702
G PD +++
Sbjct: 456 TGLEPDYVTLV 466
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/754 (36%), Positives = 421/754 (55%), Gaps = 97/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H+ IK G+ + L+ SL++ Y+K + A K F
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF-------------------- 420
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
L E N+ V W ++V Y ++ ++ +F +M + ++P QFT S+
Sbjct: 421 -----LXTETENI------VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT+LG L G+++H+ V+KTG V V + L++MYAK G
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYG----------------- 512
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+L LA ++ E DVV+W +MIAGY Q+ EAL +F M +
Sbjct: 513 --------------QLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEM-EY 557
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ D AS +SACA + L+ G+QIHA F A + NALIS YA+ G ++
Sbjct: 558 RGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQE 617
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A YL F+ + D++ ++W +++ G Q+G
Sbjct: 618 A----------YL-----------------------AFEKIGDKNNISWNSLVSGLAQSG 644
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++A+++F M+R + N +T + +S ++SLA++ G+QIH+ L++G S VSN
Sbjct: 645 YFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSN 704
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+LI++Y+K+G+I+ A R FN + R +SW +MI +QHG G EA++LFE M GI
Sbjct: 705 SLISLYAKSGSISDAWREFNDMSERN-VISWNAMITGYSQHGCGMEALRLFEEMKVCGIM 763
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+H+T+VGVL+AC+H GLV++G Y+ M +H + P H+ +VDLLGRAG L A
Sbjct: 764 PNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAME 823
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+I+ MP+ D + W +LLSAC +HKN+++G+ AA LL +EP++S Y + N+Y+ +
Sbjct: 824 YIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQ 883
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W RK MK GVKK G SW++++N VH F D LHP + IY + + E
Sbjct: 884 WIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSE 943
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+V D+ S+L++ E+ K+ + HSEKLAIAFGL+S N +R+MKNLRVCNDCH+
Sbjct: 944 IGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNW 1003
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK++ K+ +R I+VRDA RFHHF G+CSC+D+W
Sbjct: 1004 IKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 244/521 (46%), Gaps = 72/521 (13%)
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD P+ N ++ Y+K G ++ A +VFN + +D V+W +I ++ G + AI
Sbjct: 191 FDSSPLVA----NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAI 246
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+F +M ++ PT + ++SVL++ T + G+++H V+K G V N L+ +Y
Sbjct: 247 LLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALY 306
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
++ + A+ +F M ++ S+N S+I+
Sbjct: 307 SRSRKLISAERIFSTMNSRDGVSYN-------------------------------SLIS 335
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G Q G+ AL +F M +D LKPD T+AS LSACA++ L G Q+H++ I+
Sbjct: 336 GLVQQGFSDRALELFTKMQRD-CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
A + +L+ Y+K VE A K F
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHK---------------------------------FFL 421
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
++V W MLV Y Q D+ E+FR M EG PN +T ++L +SL +L
Sbjct: 422 XTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
G+QIH +++G ++ V + LI MY+K G + A R+ + + VSWT+MI
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYV 540
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
QH + EA+QLFE M GI+ D+I + ++AC + QGQ+ +
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIH-AQSYAAGFGADL 599
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
S +++ L R G +QEAY E + + + ++W SL+S
Sbjct: 600 SINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSG 639
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 155/613 (25%), Positives = 281/613 (45%), Gaps = 108/613 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL+ L S + F +H RI K G L +SL++ Y + A KVFDE
Sbjct: 61 YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120
Query: 76 VKTLCSWNTILSAY-AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+++ SWN ++ + A++ + C +F
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFC--------------------------------LFR 148
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
M+ + + P +T VL +C GD++ K+VHS G V N L+++Y+K
Sbjct: 149 RMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK 207
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G AK VF+ + +K D+VTW +MI+G
Sbjct: 208 NGYIESAKKVFNCICMK-------------------------------DIVTWVAMISGL 236
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
SQNG + EA+ +F +M S + P + L+S LSA ++ +LG+Q+H +I+ F +
Sbjct: 237 SQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V N L++ Y++ ++K++ A RIF ++
Sbjct: 296 TYVCNGLVALYSR------SRKLI---------------------------SAERIFSTM 322
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
RD V++ +++ G Q G + A+ELF M R+ KP+ T++++LS +S+ +L G
Sbjct: 323 NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
Q+H+ A+++G ++ + + +L+ +YSK ++ A + F L + V W M+VA Q
Sbjct: 383 QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF-LXTETENIVLWNVMLVAYGQL 441
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPS 551
++ ++F +M G+ P+ TY +L CT G + G++ + +++K ++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL- 610
+ ++D+ + G L A + +P E DVV+W ++++ H E++
Sbjct: 502 --SVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYR 558
Query: 611 -IEPDNSGAYSAL 622
I+ DN G SA+
Sbjct: 559 GIQFDNIGFASAI 571
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 191/411 (46%), Gaps = 73/411 (17%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P +F Y +L++ ++G+ +H +IK G L+V++ + L++ YAK ++ A ++
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
+P + SW +++ Y + A ++F M R + ++ IG
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG--------IQFDNIG------ 566
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
S +++C + L G+++H+ G +++ N+L+++Y
Sbjct: 567 -----------------FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLY 609
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
A+ G A F+ + KN SWN S+++
Sbjct: 610 ARCGRIQEAYLAFEKIGDKNNISWN-------------------------------SLVS 638
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G +Q+GY EAL +F ML+ + + + FT S +SA A+L +K G+QIH+ +++T +D
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEA-EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYD 697
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ V N+LIS YAK G + A + E + +S NVI++ ++ GY + G A R+F+
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWR--EFNDMSERNVISWNAMITGYSQHGCGMEALRLFE 755
Query: 371 SLRDRDV----VAWTAMLVGYEQNGLNKDAVELFRSMVREG---PKPNNYT 414
++ + V + +L GL K+ ++ F SM + PK +Y
Sbjct: 756 EMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++L M G + N +L + SL ++H +SG + ++L+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y + G+ + A +VF+ + + SW MI + LF RML GI P+ T
Sbjct: 103 YFRHGDQHGAVKVFDE-NSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYT 161
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHK------IKPTPSHFASMVDLLGRAGLLQEAY 570
+ GVL AC G + +N +K VH +P ++DL + G ++ A
Sbjct: 162 FAGVLKACVGGDIA------FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215
Query: 571 NFIENMPLEPDVVAWGSLLSA 591
+ N D+V W +++S
Sbjct: 216 K-VFNCICMKDIVTWVAMISG 235
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 266/704 (37%), Positives = 407/704 (57%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQV 141
N+++ Y+K G L A +F+ +++VSW T+I G A +F EM +Q+ +
Sbjct: 173 NSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDI 232
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+ TV ++L +C + L + K++H + ++ G V N + YAK G + A+
Sbjct: 233 EVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAER 292
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VF M K V+S WN++I G +QNG +A
Sbjct: 293 VFYSMETKTVNS-------------------------------WNALIGGCAQNGDPRKA 321
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L ++ M S L PD FT+ S L A A+L+ L+ GK++H +++R
Sbjct: 322 LNLYIQMTY-SGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRH-------------- 366
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
G+EI I GIS L++ YI G+ AR +FD + ++ V+W
Sbjct: 367 ------GLEIDSFI----GISLLSL---------YIHCGESSSARLLFDGMEEKSSVSWN 407
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY QNGL +DA+ LFR +V +G +P++ + ++L S ++L GK+ H AL++
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ V+ + I MY+K+G I +R VF+ + ++ SW ++I A HG GEE+I+L
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIEL 526
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FERM ++G PD T++G+LT C+H GLVE+G +Y+N M+N H I+P H+A ++D+LG
Sbjct: 527 FERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLG 586
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L +A + MP +PD W SLLS CR L++G+I AEKLL +EP N Y +
Sbjct: 587 RAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVS 646
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY+ G+W+D +R+ +K +G++K G SW+++ KVH F D L PQ +
Sbjct: 647 LSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMT 706
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
K+ ++ ++G+ P+T++VLHDV+E+ K + LR HSEKLAI FGL++T + TTLRI KN
Sbjct: 707 WRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKN 766
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C DCH+A KF+ ++ REI++RD RFHHFK GLCSC DYW
Sbjct: 767 LRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/603 (27%), Positives = 281/603 (46%), Gaps = 118/603 (19%)
Query: 9 LISPLEFYAH------LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
LI+ EF A ++++ S + +G+++H +IK GL L VF+ N+L
Sbjct: 21 LITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL-------- 72
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
++ Y K G +D A +VF+ MP R+ VSW +II ++E
Sbjct: 73 -----------------------IAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSE 109
Query: 123 IGRFKNAIRMFVEMV--QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
G K+ M VEM+ ++ +LP T+ +VL C D+ G ++H VK GLS V
Sbjct: 110 NGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDV 169
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V NSL++MY+K G A+ +FD KN
Sbjct: 170 RVNNSLVDMYSKCGYLTEAQMLFDKNNRKN------------------------------ 199
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
V+WN+MI G GY FEA +F M ++ ++ T+ + L AC + +L+ K++
Sbjct: 200 -AVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKEL 258
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H Y IR F V N ++ YAK G + A+
Sbjct: 259 HGYSIRHGFQYDELVANGFVAAYAKCGMLICAE--------------------------- 291
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
R+F S+ + V +W A++ G QNG + A+ L+ M G P+ +T+ ++L
Sbjct: 292 ------RVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLL 345
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S+ L SL +GK++H LR G + +L+++Y G ++AR +F+ + + +V
Sbjct: 346 ASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGME-EKSSV 404
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-- 538
SW +MI +Q+GL E+A+ LF +++ G +P I V VL AC+ + G+ +
Sbjct: 405 SWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYA 464
Query: 539 ----MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+M++V S +D+ ++G ++E+ + + + D+ +W ++++A V
Sbjct: 465 LKALLMEDVFVA-------CSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGV 516
Query: 595 HKN 597
H +
Sbjct: 517 HGD 519
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 204/479 (42%), Gaps = 72/479 (15%)
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+ V NE+ + +AI MFV+++ D + FT V+ +CT D G+ +H V+K
Sbjct: 3 VAVHRNEL--YSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKM 60
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
GL V V N+L+ MY K G A VF M ++N+ SW
Sbjct: 61 GLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSW-------------------- 100
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEK 293
NS+I+G+S+NG+ + M M+ + L PD TL + L CA
Sbjct: 101 -----------NSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD 149
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
+++G +IH ++ V N+L+ Y+K G YL
Sbjct: 150 VQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCG---------------YLT-------- 186
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPKPNN 412
A+ +FD ++ V+W M+ G G +A LFR M ++E + N
Sbjct: 187 ----------EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNE 236
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
T+ +L ++ L K++H ++R G V+N + Y+K G + A RVF
Sbjct: 237 VTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYS 296
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ + SW ++I AQ+G +A+ L+ +M G+ PD T +L A H +
Sbjct: 297 METKTVN-SWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRY 355
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G+ + + H ++ S++ L G A + M E V+W +++S
Sbjct: 356 GKEVHGFVLR-HGLEIDSFIGISLLSLYIHCGESSSARLLFDGME-EKSSVSWNAMISG 412
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 175/448 (39%), Gaps = 142/448 (31%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH +++ GL + F+ SL++ Y S A+ +FD M K+ SWN ++S Y++
Sbjct: 356 GKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQ 415
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +P ++A+ +F ++V D P+ V SV
Sbjct: 416 NG-----------LP--------------------EDALILFRKLVSDGFQPSDIAVVSV 444
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C+ L GK+ H + +K L V V S ++MYAK G +++VFDG++ K++
Sbjct: 445 LGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDL 504
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+SWN + IA Y +G E++ +F M K
Sbjct: 505 ASWNAI-------------------------------IAAYGVHGDGEESIELFERMRKV 533
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ PD FT L+ C+ HA ++
Sbjct: 534 GQM-PDGFTFIGILTVCS-----------HAGLV-------------------------- 555
Query: 332 AQKIVEQSGISYLNVI----AFTTLLDGYIKIGD-IGPARRIFDSLRDRDVVAWTAMLVG 386
+ G+ Y N + L+ Y + D +G A R+ D+LR
Sbjct: 556 ------EEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALR------------- 596
Query: 387 YEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
+V E P +P++ S++LS + L+ G QI A L E
Sbjct: 597 ----------------LVHEMPEQPDSRVWSSLLSFCRNFGELEIG-QIVAEKLLELEPK 639
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLI 473
++ +L +Y+ +G + RRV +I
Sbjct: 640 NVENYVSLSNLYAGSGRWDDVRRVRQMI 667
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK H +K L VF+ S ++ YAK+ I ++ VFD + K L SWN I++AY
Sbjct: 456 LGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYG 515
Query: 91 KQGRLDLACEVFNLMPN----RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ----DQVL 142
G + + E+F M D ++ I+ + G + ++ F EM + L
Sbjct: 516 VHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKL 575
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD----EMM 198
V +L L D A + VH + V +SLL+ G+ +++
Sbjct: 576 EHYACVMDMLGRAGRLDD--ALRLVHEMPEQPD----SRVWSSLLSFCRNFGELEIGQIV 629
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
A+ + + + KNV ++ + +L+ SGR D R + QMI+
Sbjct: 630 AEKLLE-LEPKNVENYVSLSNLYAGSGRWDDVR-RVRQMIK 668
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 278/771 (36%), Positives = 417/771 (54%), Gaps = 101/771 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
F++ LL ++ R+ +HA+++ GL S FL +N I YA+KVFDE
Sbjct: 73 FFSSLLDHSVHKRHL---NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEF 129
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P ++ W II Y+ F +AI M+
Sbjct: 130 PEPSV-------------------------------FLWNAIIRGYSSHNFFGDAIEMYS 158
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M V P FT+ VL +C+ + L GK+VH + + G V V N L+ +YAK G
Sbjct: 159 RMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCG 218
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
R++ AR F+ + +R++V+W SMI+GY Q
Sbjct: 219 -------------------------------RVEQARIVFEGLDDRNIVSWTSMISGYGQ 247
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG EAL +F M + ++KPD L S L A ++E L+ GK IH +++
Sbjct: 248 NGLPMEALRIFGQM-RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKM------- 299
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
G+E ++ I+ T + Y K G + AR FD +
Sbjct: 300 -------------GLEFEPDLL----------ISLTAM---YAKCGQVMVARSFFDQMEI 333
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+V+ W AM+ GY +NG +AV LF+ M+ + + ++ T+ + + + + SLD K +
Sbjct: 334 PNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWM 393
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
++ + + V+ ALI M++K G+++ AR VF+ ++ V W++MIV HG
Sbjct: 394 GDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRT-LDKDVVVWSAMIVGYGLHGR 452
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G++AI LF M + G+ P+ +T+VG+LTAC H GLVE+G ++ MK + I+ H+A
Sbjct: 453 GQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMK-YYGIEARHQHYA 511
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGR+G L EAY+FI MP+EP V WG+LL AC++++++ LG+ AAE+L ++P
Sbjct: 512 CVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPF 571
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L NLY+S W+ A +R M+ G+ K G+S ++I K+ F V D HP+
Sbjct: 572 NTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPR 631
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
I+ ++ + +KE GF+P SVLHD+ ++ KE+ L +HSE+LAIA+GLIST T
Sbjct: 632 FKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGT 691
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TLRI KNLR C +CHSA K I KLV+REIVVRDA RFHHFK G+CSCRDYW
Sbjct: 692 TLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/706 (35%), Positives = 409/706 (57%), Gaps = 40/706 (5%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQVLP 143
+ Y+ G L A +F+ +P D +WT +I + GR AI+ + + ++ V P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+ + SV +C +L D+ K+VH ++ G V + N+L++MY K A+ VF
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+GM RDV++W SM + Y G EALG
Sbjct: 137 EGMPF-------------------------------RDVISWTSMASCYVNCGLLREALG 165
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F M + +P+ T++S L AC +L+ LK G+++H +++R V +AL++ Y
Sbjct: 166 AFRKMGLNGE-RPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMY 224
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV----VA 379
A + AQ + + +S + +++ L+ Y + +F + V +
Sbjct: 225 ASCLSIRQAQLVFDS--MSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYAS 282
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G QNG + A+E+ M G KPN T++++L ++L SL GKQIH
Sbjct: 283 WNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIF 342
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
R L+ + AL+ MY+K G++ +RRVF+++ +++TVSW +MI+A + HG GEEA+
Sbjct: 343 RHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMT-KRDTVSWNTMIIATSMHGNGEEAL 401
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF M++ G++P+ +T+ GVL+ C+H LV++G ++ M H ++P H + MVD+
Sbjct: 402 LLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDV 461
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
L RAG L+EAY FI+ MP+EP AWG+LL CRV+KN++LG+IAA +L IE DN G Y
Sbjct: 462 LSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNY 521
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+ S W +A+ RK M+ GV K G SW+Q++N+VH F V D + Q D IY
Sbjct: 522 VLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIY 581
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+ + ++++ G++P+T VL DV+++ KE++L +HSEKLA+AFG+++ +++R+
Sbjct: 582 RFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVF 641
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLR+C DCH+AIKF+ K+V +I+VRD+ RFHHF+ GLCSC+D+W
Sbjct: 642 KNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 213/465 (45%), Gaps = 70/465 (15%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ K VH I+ G V L N+L++ Y K A+ VF+ MP
Sbjct: 92 RDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPF---------- 141
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
RD +SWT++ Y G + A+ F +M + P
Sbjct: 142 ---------------------RDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSV 180
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
TV+S+L +CT L DL +G++VH FVV+ G+ G V V+++L+NMYA A+ VFD M
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEAL 262
++ SWNV+++ + + + + F +M+ V +WN++I G QNG +AL
Sbjct: 241 SRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKAL 300
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ + M ++S KP++ T+ S L AC NLE L+ GKQIH YI R F AL+
Sbjct: 301 EVLSRM-QNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFM 359
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +E+ +RR+F + RD V+W
Sbjct: 360 YAKCGDLEL---------------------------------SRRVFSMMTKRDTVSWNT 386
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M++ +G ++A+ LFR MV G +PN+ T + +LS S +D G I S R
Sbjct: 387 MIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDH 446
Query: 443 EAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ ++ + S+AG + A + +W +++
Sbjct: 447 SVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALL 491
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 163/343 (47%), Gaps = 24/343 (6%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E PN ++ S L L +LKS G+ VH +++ G+ +VF+ ++L+N YA
Sbjct: 175 ERPNSVTVSSILPACTDL--KDLKS-----GREVHGFVVRNGMGGNVFVSSALVNMYASC 227
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTII 117
SI A+ VFD M + SWN +++AY + VF M + + SW +I
Sbjct: 228 LSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVI 287
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ GR + A+ + M P Q T+TSVL +CT L L GK++H ++ +
Sbjct: 288 GGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFF 347
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV---SLHIHSGR-LDLARAQ 233
+ T +L+ MYAK GD +++ VF M ++ SWN ++ S+H + L L R
Sbjct: 348 QDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREM 407
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK---FTLASTLSACAN 290
D + + VT+ +++G S + E L +F +M +D S++PD + LS
Sbjct: 408 VDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGR 467
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
LE + + +I + + T AL+ VE+ +
Sbjct: 468 LE------EAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGR 504
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/754 (36%), Positives = 421/754 (55%), Gaps = 97/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H+ IK G+ + L+ SL++ Y+K + A K F
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF-------------------- 420
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
L E N+ V W ++V Y ++ ++ +F +M + ++P QFT S+
Sbjct: 421 -----LTTETENI------VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT+LG L G+++H+ V+KTG V V + L++MYAK G
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYG----------------- 512
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+L LA ++ E DVV+W +MIAGY Q+ EAL +F M +
Sbjct: 513 --------------QLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEM-EY 557
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ D AS +SACA + L+ G+QIHA F A + NALIS YA+ G ++
Sbjct: 558 RGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQE 617
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A YL F+ + D++ ++W +++ G Q+G
Sbjct: 618 A----------YL-----------------------AFEKIGDKNNISWNSLVSGLAQSG 644
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++A+++F M+R + N +T + +S ++SLA++ G+QIH+ L++G S VSN
Sbjct: 645 YFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSN 704
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+LI++Y+K+G+I+ A R FN + R +SW +MI +QHG G EA++LFE M GI
Sbjct: 705 SLISLYAKSGSISDAWREFNDMSERN-VISWNAMITGYSQHGCGMEALRLFEEMKVCGIM 763
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+H+T+VGVL+AC+H GLV++G Y+ M +H + P H+ +VDLLGRAG L A
Sbjct: 764 PNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAME 823
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+I+ MP+ D + W +LLSAC +HKN+++G+ AA LL +EP++S Y + N+Y+ +
Sbjct: 824 YIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQ 883
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W RK MK GVKK G SW++++N VH F D LHP + IY + + E
Sbjct: 884 WIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSE 943
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+V D+ S+L++ E+ K+ + HSEKLAIAFGL+S N +R+MKNLRVCNDCH+
Sbjct: 944 IGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNW 1003
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK++ K+ +R I+VRDA RFHHF G+CSC+D+W
Sbjct: 1004 IKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 245/521 (47%), Gaps = 72/521 (13%)
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD P+ N ++ Y+K G ++ A +VFN + +D V+W +I ++ G + AI
Sbjct: 191 FDSSPLVA----NLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAI 246
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+F +M ++ PT + ++SVL++ T + G+++H V+K G V N L+ +Y
Sbjct: 247 LLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALY 306
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
++ + A+ +F M ++ S+N S+I+
Sbjct: 307 SRSRKLISAERIFSTMNSRDGVSYN-------------------------------SLIS 335
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G Q G+ AL +F M +D LKPD T+AS LSACA++ L G Q+H++ I+
Sbjct: 336 GLVQQGFSDRALELFTKMQRD-CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
A + +L+ Y+K VE A K F
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHK---------------------------------FFL 421
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+ ++V W MLV Y Q D+ E+FR M EG PN +T ++L +SL +L
Sbjct: 422 TTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
G+QIH +++G ++ V + LI MY+K G + A R+ + + VSWT+MI
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYV 540
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
QH + EA+QLFE M GI+ D+I + ++AC + QGQ+ +
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIH-AQSYAAGFGADL 599
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
S +++ L R G +QEAY E + + + ++W SL+S
Sbjct: 600 SINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLVSG 639
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 155/613 (25%), Positives = 281/613 (45%), Gaps = 108/613 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL+ L S + F +H RI K G L +SL++ Y + A KVFDE
Sbjct: 61 YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120
Query: 76 VKTLCSWNTILSAY-AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+++ SWN ++ + A++ + C +F
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFC--------------------------------LFR 148
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
M+ + + P +T VL +C GD++ K+VHS G V N L+++Y+K
Sbjct: 149 RMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK 207
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G AK VF+ + +K D+VTW +MI+G
Sbjct: 208 NGYIESAKKVFNCICMK-------------------------------DIVTWVAMISGL 236
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
SQNG + EA+ +F +M S + P + L+S LSA ++ +LG+Q+H +I+ F +
Sbjct: 237 SQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V N L++ Y++ ++K++ A RIF ++
Sbjct: 296 TYVCNGLVALYSR------SRKLI---------------------------SAERIFSTM 322
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
RD V++ +++ G Q G + A+ELF M R+ KP+ T++++LS +S+ +L G
Sbjct: 323 NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
Q+H+ A+++G ++ + + +L+ +YSK ++ A + F L + V W M+VA Q
Sbjct: 383 QLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF-LTTETENIVLWNVMLVAYGQL 441
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPS 551
++ ++F +M G+ P+ TY +L CT G + G++ + +++K ++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVC 501
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL- 610
+ ++D+ + G L A + +P E DVV+W ++++ H E++
Sbjct: 502 --SVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYR 558
Query: 611 -IEPDNSGAYSAL 622
I+ DN G SA+
Sbjct: 559 GIQFDNIGFASAI 571
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 191/411 (46%), Gaps = 73/411 (17%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P +F Y +L++ ++G+ +H +IK G L+V++ + L++ YAK ++ A ++
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
+P + SW +++ Y + A ++F M R + ++ IG
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG--------IQFDNIG------ 566
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
S +++C + L G+++H+ G +++ N+L+++Y
Sbjct: 567 -----------------FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLY 609
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
A+ G A F+ + KN SW NS+++
Sbjct: 610 ARCGRIQEAYLAFEKIGDKNNISW-------------------------------NSLVS 638
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G +Q+GY EAL +F ML+ + + + FT S +SA A+L +K G+QIH+ +++T +D
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEA-EVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYD 697
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ V N+LIS YAK G + A + E + +S NVI++ ++ GY + G A R+F+
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWR--EFNDMSERNVISWNAMITGYSQHGCGMEALRLFE 755
Query: 371 SLRDRDV----VAWTAMLVGYEQNGLNKDAVELFRSMVREG---PKPNNYT 414
++ + V + +L GL K+ ++ F SM + PK +Y
Sbjct: 756 EMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++L M G + N +L + SL ++H +SG + ++L+
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y + G+ + A +VF+ + + SW MI + LF RML GI P+ T
Sbjct: 103 YFRHGDQHGAVKVFDE-NSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYT 161
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHK------IKPTPSHFASMVDLLGRAGLLQEAY 570
+ GVL AC G + +N +K VH +P ++DL + G ++ A
Sbjct: 162 FAGVLKACVGGDIA------FNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215
Query: 571 NFIENMPLEPDVVAWGSLLSA 591
+ N D+V W +++S
Sbjct: 216 K-VFNCICMKDIVTWVAMISG 235
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/786 (34%), Positives = 421/786 (53%), Gaps = 109/786 (13%)
Query: 15 FYAHLLQSNLKSRN---PFV------------GKLVHARIIKCGLHLSVFLKNSLMNFYA 59
Y H+LQ + N PF+ G+L+H GL + +++ +L++ YA
Sbjct: 94 LYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYA 153
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
K + A+ +F+ + + +RD V+W +I
Sbjct: 154 KCGHLYQAQTLFNSISHQ-----------------------------DRDIVAWNAMIAA 184
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
++ I +M Q V P T+ S+L + L GK +H++ ++
Sbjct: 185 FSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDN 244
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V + +LL+MYAK A+ +F+ + KN
Sbjct: 245 VVLQTALLDMYAKCHLLFYARKIFNTVNKKND---------------------------- 276
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
V W++MI GY + +AL ++ +ML L P TLA+ L ACA L LK GK+
Sbjct: 277 ---VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKK 333
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H ++I++ D VGN+LIS YAK G ++ N + F
Sbjct: 334 LHCHMIKSGMDLDTTVGNSLISMYAKCGIMD--------------NAVGF---------- 369
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
D + +D V+++A++ G QNG + A+ +FR M G P T+ A+L
Sbjct: 370 ---------LDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALL 420
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S LA+L HG H + G + S+ NA+I MYSK G I +R +F+ + R +
Sbjct: 421 PACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNR-DI 479
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
+SW +MI+ HGL EA+ LF+ + LG+KPD +T + VL+AC+H GLV +G+ +++
Sbjct: 480 ISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSS 539
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M IKP +H+ MVDLL RAG L EAY FI+ MP P+V WG+LL+ACR HKN++
Sbjct: 540 MSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIE 599
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
+G+ ++K+ L+ P+ +G + + N+YSS G+W+DAA IR ++ G KK+ G SWV+I
Sbjct: 600 MGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEIS 659
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+HVF HPQ +I K+ ++ ++K++G+ D++ VLHDVEE+ KEQ+L +HSE
Sbjct: 660 GVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSE 719
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
K+AIAFG+++T ++ + + KNLR+C DCHSAIKFI L +REI VRDA+RFHHFK G+C
Sbjct: 720 KVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGIC 779
Query: 780 SCRDYW 785
+C+D+W
Sbjct: 780 NCQDFW 785
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 238/510 (46%), Gaps = 71/510 (13%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
+ + + LA VF+ +P V W +I TY G F+ +I +++ M+Q V PT FT
Sbjct: 51 HISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTF 110
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+L +C++L L G+ +H+ GLS + V+ +LL+MYAK G A+ +F+ +
Sbjct: 111 PFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISH 170
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+ +RD+V WN+MIA +S + + + A M
Sbjct: 171 Q-----------------------------DRDIVAWNAMIAAFSFHALHAQTIHSVAQM 201
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + + P+ TL S L L GK IHAY IR F
Sbjct: 202 -QQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFF------------------- 241
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ NV+ T LLD Y K + AR+IF+++ ++ V W+AM+ GY
Sbjct: 242 --------------FDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYV 287
Query: 389 QNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+ DA+ L+ M+ G P TL+ ML + L L GK++H ++SG
Sbjct: 288 LHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDT 347
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+V N+LI+MY+K G ++ A + + ++TVS++++I Q+G E+A+ +F +M
Sbjct: 348 TVGNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS 406
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQ--RYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
GI P T + +L AC+H ++ G Y +++ + M G+ +
Sbjct: 407 SGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITI 466
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+E ++ ++N D+++W +++ +H
Sbjct: 467 SREIFDRMQNR----DIISWNTMIIGYGIH 492
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 228/509 (44%), Gaps = 105/509 (20%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
TPN +L+S L Q+N + GK +HA I+ +V L+ +L++ YAK
Sbjct: 207 TPNSSTLVSILPTIG---QANALHQ----GKAIHAYYIRNFFFDNVVLQTALLDMYAKCH 259
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ YA+K+F+ + K W+ ++ Y DS+S
Sbjct: 260 LLFYARKIFNTVNKKNDVCWSAMIGGYVLH----------------DSIS---------- 293
Query: 123 IGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+A+ ++ +M+ L PT T+ ++L +C L DL GKK+H ++K+G+
Sbjct: 294 -----DALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTT 348
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V NSL++MYAK G +D A D+MI +D
Sbjct: 349 VGNSLISMYAKCGI-------------------------------MDNAVGFLDEMIAKD 377
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V+++++I+G QNGY +AL +F M + S + P T+ + L AC++L L+ G H
Sbjct: 378 TVSYSAIISGCVQNGYAEKALLIFRQM-QSSGIAPYLETMIALLPACSHLAALQHGTCCH 436
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y + F + NA+I Y+K G + I
Sbjct: 437 GYTVVRGFTNDTSICNAIIDMYSKCGKITI------------------------------ 466
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+R IFD +++RD+++W M++GY +GL +A+ LF+ + G KP++ TL A+LS
Sbjct: 467 ---SREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSA 523
Query: 422 SSSLASLDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S + GK +S ++ ++ ++ + ++AGN++ A + +
Sbjct: 524 CSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVR 583
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELG 509
W +++ A H E Q+ +++ LG
Sbjct: 584 IWGALLAACRTHKNIEMGEQVSKKIQLLG 612
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 197/395 (49%), Gaps = 49/395 (12%)
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
HI + LAR FDQ+ + VV WN MI Y+ +G +++ ++ +ML+ + P FT
Sbjct: 51 HISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQ-LGVTPTNFT 109
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L AC++L+ L+LG+ IH + A + G+
Sbjct: 110 FPFLLKACSSLQALQLGRLIHTH--------------------AHILGLS---------- 139
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAMLVGYEQNGLNKDAVE 398
+++ T LL Y K G + A+ +F+S+ +DRD+VAW AM+ + + L+ +
Sbjct: 140 ---MDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIH 196
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
M + G PN+ TL ++L +L GK IHA +R+ ++ + AL+ MY+
Sbjct: 197 SVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYA 256
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITY 517
K + AR++FN ++ ++ V W++MI H +A+ L++ ML + G+ P T
Sbjct: 257 KCHLLFYARKIFNTVN-KKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATL 315
Query: 518 VGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+L AC +++G++ + +M+K+ + T + S++ + + G++ A F++ M
Sbjct: 316 ATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGN--SLISMYAKCGIMDNAVGFLDEM 373
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
+ D V++ +++S C + AEK LLI
Sbjct: 374 -IAKDTVSYSAIISGC-------VQNGYAEKALLI 400
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 16/300 (5%)
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
A T L +I +I AR +FD + VV W M+ Y +G + ++ L+ M++ G
Sbjct: 43 AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P N+T +L SSL +L G+ IH A G + L VS AL+ MY+K G++ A+
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQ 162
Query: 468 RVFNLI-HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+FN I H ++ V+W +MI A + H L + I +M + G+ P+ T V +L
Sbjct: 163 TLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQ 222
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHF------ASMVDLLGRAGLLQEAYNFIENMPLEP 580
+ QG K +H F +++D+ + LL A + +
Sbjct: 223 ANALHQG-------KAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN 275
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
D V W +++ +H ++ + +L I N + L + +C + D +K
Sbjct: 276 D-VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTP-ATLATMLRACAQLTDLKRGKK 333
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/771 (34%), Positives = 419/771 (54%), Gaps = 99/771 (12%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FYA L+ S K +HAR++ GL S FL L++ + I++A++VFD++
Sbjct: 23 FYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P W II Y+ F++A+ M+
Sbjct: 80 -------------------------------PRPQIFPWNAIIRGYSRNNHFQDALLMYS 108
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M +V P FT +L +C+ L L G+ VH+ V + G V V N L+ +YAK
Sbjct: 109 NMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR 168
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ VF+G+ L ER +V+W ++++ Y+Q
Sbjct: 169 RLGSARTVFEGLPLP-----------------------------ERTIVSWTAIVSAYAQ 199
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG EAL +F++M K +KPD L S L+A L+ LK G+ IHA +++
Sbjct: 200 NGEPMEALEIFSHMRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM------- 251
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
G+EI ++ I+ T+ Y K G + A+ +FD ++
Sbjct: 252 -------------GLEIEPDLL----------ISLNTM---YAKCGQVATAKILFDKMKS 285
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+++ W AM+ GY +NG ++A+++F M+ + +P+ ++++ +S + + SL+ + +
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+ RS + +S+ALI M++K G++ AR VF+ R + V W++MIV HG
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGR 404
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EAI L+ M G+ P+ +T++G+L AC H G+V +G ++N+M + HKI P H+A
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYA 463
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
++DLLGRAG L +AY I+ MP++P V WG+LLSAC+ H++++LG+ AA++L I+P
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L NLY++ W+ A +R MK G+ K G SWV+++ ++ F V D HP+
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+ I ++ I +KE GFV + + LHD+ ++ E+ L HSE++AIA+GLISTP+ T
Sbjct: 584 YEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGT 643
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRI KNLR C +CH+A K I KLVDREIVVRD RFHHFK G+CSC DYW
Sbjct: 644 PLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/675 (38%), Positives = 390/675 (57%), Gaps = 51/675 (7%)
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
+W++II Y + F M V P + S+L + T L +H+
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
V+ GL + + N+L+N YAK + A VFD + S +D +
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHN---AGKVFDVFPKRGESG-------------IDCVK 180
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD M RDVV+WN++IAG++QNG EAL M M K+ LKPD FTL+S L A
Sbjct: 181 KVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEH 240
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
+ GK+IH Y +R FD +G++LI YAK +E +
Sbjct: 241 VDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSL------------------ 282
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
R F L +D ++W +++ G QNG + FR M++E KP
Sbjct: 283 ---------------RAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPM 327
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+ S+++ + L +L G+Q+H +R G + ++++L+ MY+K GNI AR VF+
Sbjct: 328 AVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFD 387
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
I +++ V+WT++I+ A HG +A+ LFE MLE G++P ++ ++ VLTAC+H GLV+
Sbjct: 388 RID-KRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVD 446
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM-PLEPDVVAWGSLLS 590
+G RY+N M+ I P H+A++ DLLGRAG L+EAY+FI NM ++P W LL+
Sbjct: 447 EGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLA 506
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
ACR HK+++L + +KLL ++ +N GAY + N+YS+ +W+DAA +R M+ G+KKT
Sbjct: 507 ACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKT 566
Query: 651 QGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVK 710
SW+++ N+VH F D HP D I + + +++++ G+V DT VLHDV+E++K
Sbjct: 567 PACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELK 626
Query: 711 EQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATR 770
++L +HSE+LAIA+G+IST TT+R++KN+RVC DCH+AIKFI K+V REI VRD +R
Sbjct: 627 RELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSR 686
Query: 771 FHHFKKGLCSCRDYW 785
FHHFK G CSC DYW
Sbjct: 687 FHHFKNGSCSCGDYW 701
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 223/511 (43%), Gaps = 114/511 (22%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK--------------- 60
+ LL+++ ++ + +HA ++ GL +++ N+L+N YAK
Sbjct: 113 FPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRG 172
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
I KKVFD MPV+ + SWNT+++ +A+
Sbjct: 173 ESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQN---------------------------- 204
Query: 121 NEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
G + A+ M EM ++ L P FT++S+L D++ GK++H + V+ G G
Sbjct: 205 ---GMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGD 261
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V + +SL++MYAK + F + K+ SWN ++
Sbjct: 262 VFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSII--------------------- 300
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
AG QNG LG F MLK+ ++KP + +S + ACA+L L LG+Q
Sbjct: 301 ----------AGCVQNGEFDRGLGFFRRMLKE-NVKPMAVSFSSVIPACAHLTALSLGRQ 349
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H I+R FD + ++L+ YAK G +++
Sbjct: 350 LHGCIVRLGFDDNEFIASSLVDMYAKCGNIKM---------------------------- 381
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
AR +FD + RD+VAWTA+++G +G DAV LF +M+ +G +P A+L
Sbjct: 382 -----ARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436
Query: 420 SVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
+ S +D G + S R G A L A+ + +AG + A + + Q
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496
Query: 479 TVS-WTSMIVALAQHGLGEEAIQLFERMLEL 508
T S W+ ++ A H E A ++ +++L +
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSV 527
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 43/242 (17%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P S S + AHL +L G+ +H I++ G + F+ +SL++ YAK +
Sbjct: 326 PMAVSFSSVIPACAHLTALSL-------GRQLHGCIVRLGFDDNEFIASSLVDMYAKCGN 378
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGR-LDLACEVFNLMPNRDSVSWTTIIVTYNE 122
I A+ VFD + + + +W I+ A G LD
Sbjct: 379 IKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALD-------------------------- 412
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG-KKVHSFVVKTGLSGCVN 181
A+ +F M++D V P +VL +C+ G + G + +S G++ +
Sbjct: 413 ------AVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLE 466
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMR--LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
++ ++ + G A MR S W+++++ ++LA D+++
Sbjct: 467 HYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLS 526
Query: 240 RD 241
D
Sbjct: 527 VD 528
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/762 (35%), Positives = 409/762 (53%), Gaps = 105/762 (13%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R G +H +K G V++ SL++ Y++ +++ A+ +FDEMPV
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV---------- 213
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQ 145
RD SW +I Y + G K A+ + + D V
Sbjct: 214 ---------------------RDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV---- 248
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
TV S+L++CT GD + G +HS+ +K GL + V+N L+++YA+ G
Sbjct: 249 -TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG----------- 296
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
RL + FD+M RD+++WNS+I Y N A+ +F
Sbjct: 297 --------------------RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 336
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYA 324
M + S ++PD TL S S + L ++ + + + +R F +GNA++ YA
Sbjct: 337 QEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K+G V+ AR +F+ L + DV++W ++
Sbjct: 396 KLGLVD---------------------------------SARAVFNWLPNTDVISWNTII 422
Query: 385 VGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
GY QNG +A+E++ M EG N T ++L S +L G ++H L++G
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V +L MY K G + A +F I R +V W ++I HG GE+A+ LF+
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
ML+ G+KPDHIT+V +L+AC+H GLV++GQ + MM+ + I P+ H+ MVD+ GRA
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L+ A FI++M L+PD WG+LLSACRVH N+DLGKIA+E L +EP++ G + L
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+S GKWE IR G++KT G+S +++ NKV VF + HP + +Y ++
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ ++K +G+VPD VL DVE+D KE +L HSE+LAIAF LI+TP TT+RI KNLR
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 781
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCHS KFI K+ +REI+VRD+ RFHHFK G+CSC DYW
Sbjct: 782 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 156/608 (25%), Positives = 263/608 (43%), Gaps = 117/608 (19%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF-V 134
++ +C +++ Y G + LA F+ + NRD +W +I Y G IR F +
Sbjct: 83 IQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL 142
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M+ + P T SVL +C + D G K+H +K G V V SL+++Y++
Sbjct: 143 FMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ +FD M ++++ SW N+MI+GY Q
Sbjct: 200 AVGNARILFDEMPVRDMGSW-------------------------------NAMISGYCQ 228
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G EAL + +N L+ D T+ S LSAC G IH+Y I+ ++
Sbjct: 229 SGNAKEALTL-SNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N LI YA+ G + QK +FD +
Sbjct: 284 VSNKLIDLYAEFGRLRDCQK---------------------------------VFDRMYV 310
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD+++W +++ YE N A+ LF+ M +P+ TL ++ S+ S L + + +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 435 HASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
LR G +++ NA++ MY+K G +++AR VFN + + +SW ++I AQ+G
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNG 429
Query: 494 LGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPS 551
EAI+++ M E G I + T+V VL AC+ G + QG + + ++KN +
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVF 487
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMP---------------------------------- 577
S+ D+ G+ G L++A + +P
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 578 LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IEPDNSGAYSALCNLYSSCGKWED 634
++PD + + +LLSAC +D G+ E + I P + Y + ++Y G+ E
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP-SLKHYGCMVDMYGRAGQLET 606
Query: 635 AANIRKSM 642
A KSM
Sbjct: 607 ALKFIKSM 614
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+L K +HA + S + ++ +S L+ +Y GN+ AR F+ I R + +W MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR-DVYAWNLMI 124
Query: 487 VALAQHGLGEEAIQLFER-MLELGIKPDHITYVGVLTAC---THGGLVEQGQRYYNMMKN 542
+ G E I+ F ML G+ PD+ T+ VL AC G + + M +
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWD 184
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
V+ AS++ L R + A + MP+ D+ +W +++S
Sbjct: 185 VYVA-------ASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISG 225
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/700 (37%), Positives = 405/700 (57%), Gaps = 42/700 (6%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
++ LL +SR+ VHA IIK F++N L++ Y K + A+K+FD M
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + SWN+I+ A+ K G LD A +F MP D SW ++I + + GRF A+ F +
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M L +++ S L++C L DL G ++HS V ++ V + ++L++MY+K G
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCG- 200
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
R++ A++ FD+M R V+WNS+I Y QN
Sbjct: 201 ------------------------------RVEYAQSVFDEMTVRSRVSWNSLITCYEQN 230
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGP 314
G EAL +F M+K ++PD+ TLAS +SACA + +K G+QIHA +++ EF
Sbjct: 231 GPVDEALKIFVEMIK-CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLI 289
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+GNAL+ YAK + A+ I + I +V++ T+++ GY K + AR +F ++
Sbjct: 290 LGNALLDMYAKCNRINEARIIFDMMPIR--SVVSETSMVSGYAKASKVKVARYMFSNMMV 347
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+DV+ W A++ G QNG N++A+ LFR + RE P +YT +L+ ++LA L G+Q
Sbjct: 348 KDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQA 407
Query: 435 HASALRSG------EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
H+ L+ G E S + V N+LI MY K G++ RVF + ++ VSW +MIV
Sbjct: 408 HSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM-LEKDCVSWNAMIVG 466
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQ+G G +A+++F +MLE G PDH+T +GVL AC+H GL+++G+ Y+ M H + P
Sbjct: 467 YAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMP 526
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ MVDLLGRAG L+EA N IE M ++PD + WGSLL+AC+VH+N+ LG+ +KL
Sbjct: 527 LKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKL 586
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L ++P+NSG Y L N+Y+ W++ +RK M+ GV K G SW++IQ +++VF V+
Sbjct: 587 LEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVK 646
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
D H ++ IY + I ++K+ G+VP S D +E+
Sbjct: 647 DKRHARKKEIYMVLRTILQQMKQAGYVPYVGSNEFDEDEE 686
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
LK L D + L+ CA + ++HA II++ F + + N LI Y K G
Sbjct: 10 LKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGC 69
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
V++A+K+ ++ + N+ ++ +++ + K G + A IF+ + D +W +M+ G+E
Sbjct: 70 VDVARKLFDR--MLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFE 127
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q+G +A+ F M G N Y+ + LS + L L G QIH+ RS S +
Sbjct: 128 QHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVY 187
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ +AL+ MYSK G + A+ VF+ + R VSW S+I Q+G +EA+++F M++
Sbjct: 188 MGSALVDMYSKCGRVEYAQSVFDEMTVRSR-VSWNSLITCYEQNGPVDEALKIFVEMIKC 246
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G++PD +T V++AC +++GQ+ + + + + +++D+ + + E
Sbjct: 247 GVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINE 306
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A + MP+ VV+ S++S
Sbjct: 307 ARIIFDMMPIRS-VVSETSMVSG 328
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 277/777 (35%), Positives = 408/777 (52%), Gaps = 97/777 (12%)
Query: 9 LISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
LI+ Y +L+ LK ++ K VH IIK + + + N+L++ Y +
Sbjct: 24 LITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIEC------- 76
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
GRL A VF+ + + SW +I Y E ++
Sbjct: 77 ------------------------GRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAED 112
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+R+F EM + V P T +L +C +L L GK+VH+ + GL V V +LL
Sbjct: 113 AMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLR 172
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY K G A+ +FD + ++ SW V M
Sbjct: 173 MYGKCGSINEARRIFDNLMNHDIISWTV-------------------------------M 201
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I Y+Q+G EA + M + KP+ T S L+ACA+ LK K++H + +
Sbjct: 202 IGAYAQSGNGKEAYRLMLQM-EQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAG 260
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ VG AL+ YAK G ++ AR +
Sbjct: 261 LELDVRVGTALVQMYAKSGSID---------------------------------DARVV 287
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
FD ++ RDVV+W M+ + ++G +A +LF M EG KP+ ++L+ +S +L
Sbjct: 288 FDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGAL 347
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ K+IH AL SG + V AL+ MYSK+G+I+ AR VF+ + R VSW +MI
Sbjct: 348 EWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRN-VVSWNAMISG 406
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
LAQHGLG++A+++F RM G+KPD +T+V VL+AC+H GLV++G+ Y M V+ I+P
Sbjct: 407 LAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEP 466
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
SH MVDLLGRAG L EA FI+NM ++PD WG+LL +CR + N++LG++ A++
Sbjct: 467 DVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKER 526
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L ++P N+ Y L N+Y+ GKW+ + +R M+ G++K G SW+++ NK+H F V
Sbjct: 527 LKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVA 586
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D HP+ I K+ ++IK G++PDT VL + KE + HSEKLAI +GL+
Sbjct: 587 DSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLM 646
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TP +R+ KNLRVC DCH A K I K+ REI+VRDA RFHHFK G+CSC DYW
Sbjct: 647 HTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 43/346 (12%)
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EA+ + N L+ L D F L C + L KQ+H II++ + V N L
Sbjct: 11 EAIVVLMNRLQ-RGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ Y I+ G + AR +FD+L + +
Sbjct: 70 LHVY---------------------------------IECGRLQEARCVFDALVKKSGAS 96
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W AM+ GY ++ +DA+ LFR M EG +PN T +L +SL++L GK++HA
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR 156
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQETVSWTSMIVALAQHGLGEEA 498
G S + V AL+ MY K G+IN ARR+F NL++ + +SWT MI A AQ G G+EA
Sbjct: 157 HGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMN--HDIISWTVMIGAYAQSGNGKEA 214
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+L +M + G KP+ ITYV +L AC G ++ +R + + ++ ++V
Sbjct: 215 YRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDA-GLELDVRVGTALVQ 273
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA----CRVHKNLDL 600
+ ++G + +A + M + DVV+W ++ A R H+ DL
Sbjct: 274 MYAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFAEHGRGHEAYDL 318
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/786 (35%), Positives = 431/786 (54%), Gaps = 77/786 (9%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+P ++ L + L +LKS GK +H +K G+ +VF+ N+L+N Y
Sbjct: 240 PDPVTVSCILSACSDL--QDLKS-----GKAIHGFALKHGMVENVFVSNALVNLYESCLC 292
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ VFD LMP+R+ ++W ++ Y
Sbjct: 293 VREAQAVFD-------------------------------LMPHRNVITWNSLASCYVNC 321
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G + + +F EM + V P ++S+L +C+ L DL +GK +H F VK G+ V V
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVC 381
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+L+N+YA A+ VFD M R+VV
Sbjct: 382 TALVNLYANCLCVREAQTVFD-------------------------------LMPHRNVV 410
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TWNS+ + Y G+ + L +F M+ + +KPD T+ S L AC++L+ LK GK IH +
Sbjct: 411 TWNSLSSCYVNCGFPQKGLNVFREMVLNG-VKPDLVTMLSILHACSDLQDLKSGKVIHGF 469
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+R V NAL+S YAK V AQ + + I + V ++ +L Y +
Sbjct: 470 AVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDL--IPHREVASWNGILTAYFTNKEYE 527
Query: 364 PARRIFDSL-RDR---DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
+F + RD D + W+ ++ G +N ++A+E+FR M G KP+ T+ ++L
Sbjct: 528 KGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSIL 587
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S L GK+IH R + L+ +NAL+ MY+K G ++ +R VF+++ + +
Sbjct: 588 RACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-DV 646
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
SW +MI A HG G+EA+ LFE+ML +KPD T+ VL+AC+H LVE+G + +N
Sbjct: 647 FSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNS 706
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M H ++P H+ +VD+ RAG L+EAY FI+ MP+EP +AW + L+ CRV+KN++
Sbjct: 707 MSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVE 766
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
L KI+A+KL I+P+ S Y L N+ + W +A+ IRK MK G+ KT G SW +
Sbjct: 767 LAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVG 826
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
N+VH F D + + D IYN + +++ +IK G+ PDT VLHD++++ K + L +HSE
Sbjct: 827 NRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSE 886
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLA+AFG+++ +T+R+ KNLR+C DCH+AIK++ +V IVVRD+ RFHHFK G C
Sbjct: 887 KLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNC 946
Query: 780 SCRDYW 785
SC+D+W
Sbjct: 947 SCKDFW 952
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 169/648 (26%), Positives = 287/648 (44%), Gaps = 137/648 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H +++ G+ VF+ ++ +NFYAK + A+ VFD MP + + +WN++ S Y
Sbjct: 160 GKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVN 219
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G P + + +F EMV D V P TV+ +
Sbjct: 220 CG-----------FPQK--------------------GLNVFREMVLDGVKPDPVTVSCI 248
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C+ L DL +GK +H F +K G+ V V+N+L+N+Y A+AVFD M +NV
Sbjct: 249 LSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNV 308
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEALGMFANMLK 270
+WN + S +++ G+ Q G + F +G+
Sbjct: 309 ITWNSLASCYVN--------------------------CGFPQKGLNVFREMGL------ 336
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ +KPD ++S L AC+ L+ LK GK IH + + K G VE
Sbjct: 337 -NGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV-------------------KHGMVE 376
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+V T L++ Y + A+ +FD + R+VV W ++ Y
Sbjct: 377 --------------DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNC 422
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G + + +FR MV G KP+ T+ ++L S L L GK IH A+R G + V
Sbjct: 423 GFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVC 482
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQ--------------------------------- 477
NAL+++Y+K + A+ VF+LI R+
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 478 -ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ ++W+ +I ++ EEA+++F +M +G KPD T +L AC+ + G+
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
+ + H + ++VD+ + G L + N + MP++ DV +W +++ A +H
Sbjct: 603 HCYVFR-HWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHG 660
Query: 597 NLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
N EK+LL ++PD S ++ + + S E+ I SM
Sbjct: 661 NGKEALSLFEKMLLSMVKPD-SATFTCVLSACSHSMLVEEGVQIFNSM 707
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 238/530 (44%), Gaps = 90/530 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N + AY K ++ A VF+ + RD V+W ++ Y G + + +F +M ++V
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
TV+S+L C+ L DL +GK++H FVV+ G+ V V+++ +N YAK A+ V
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M RDVVTWNS+ + Y G+ + L
Sbjct: 199 FD-------------------------------LMPHRDVVTWNSLSSCYVNCGFPQKGL 227
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M+ D +KPD T++ LSAC++L+ LK GK IH + ++ V NAL++
Sbjct: 228 NVFREMVLDG-VKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNL 286
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y V AQ + FD + R+V+ W +
Sbjct: 287 YESCLCVREAQAV---------------------------------FDLMPHRNVITWNS 313
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+ Y G + + +FR M G KP+ +S++L S L L GK IH A++ G
Sbjct: 314 LASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHG 373
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V AL+ +Y+ + A+ VF+L+ R V+W S+ G ++ + +F
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRN-VVTWNSLSSCYVNCGFPQKGLNVF 432
Query: 503 ERMLELGIKPDHITYVGVLTACT-----------HGGLVEQGQRYYNMMKNVHKIKPTPS 551
M+ G+KPD +T + +L AC+ HG V G M+++V
Sbjct: 433 REMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHG-----MVEDVFVCN---- 483
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
+++ L + ++EA + +P +V +W +L+A +K + G
Sbjct: 484 ---ALLSLYAKCVCVREAQVVFDLIP-HREVASWNGILTAYFTNKEYEKG 529
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 152/628 (24%), Positives = 256/628 (40%), Gaps = 123/628 (19%)
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
AI+++ + P + +V +C A D K+ H + G+ V++ N+ ++
Sbjct: 24 AIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIH 83
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y K K V + AR FD ++ RDVVTWNS+
Sbjct: 84 AYGK------CKCV-------------------------EGARRVFDDLVARDVVTWNSL 112
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
A Y G+ + L +F M + +K + T++S L C++L+ LK GK+IH +++R
Sbjct: 113 SACYVNCGFPQQGLNVFRKM-GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHG 171
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
V +A ++ YAK V AQ +
Sbjct: 172 MVEDVFVSSAFVNFYAKCLCVREAQT---------------------------------V 198
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
FD + RDVV W ++ Y G + + +FR MV +G KP+ T+S +LS S L L
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDL 258
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
GK IH AL+ G ++ VSNAL+ +Y + A+ VF+L+ R ++W S+
Sbjct: 259 KSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN-VITWNSLASC 317
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVEQGQ--- 534
G ++ + +F M G+KPD + +L AC+ HG V+ G
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVED 377
Query: 535 -----RYYNMMKNVHKIKPTPSHF-----------ASMVDLLGRAGLLQEAYNFIENMPL 578
N+ N ++ + F S+ G Q+ N M L
Sbjct: 378 VFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVL 437
Query: 579 ---EPDVVAWGSLLSACRVHKNLDLGKIA---AEKLLLIEPDNSGAYSALCNLYSSCGKW 632
+PD+V S+L AC ++L GK+ A + ++E + +AL +LY+ C
Sbjct: 438 NGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE--DVFVCNALLSLYAKCVCV 495
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI-------------- 678
+A + + + V G NK + G+ + RD +
Sbjct: 496 REAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGC 555
Query: 679 -----YNKMAKIWDEIKEMGFVPDTASV 701
+ +I+ +++ MGF PD ++
Sbjct: 556 VKNSRIEEAMEIFRKMQTMGFKPDETTI 583
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 39/276 (14%)
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+GL +A++++ S G KP+ A+ ++ KQ H A R G S +S+
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NA I Y K + ARRVF+ + R + V+W S+ G ++ + +F +M
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVAR-DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNK 136
Query: 510 IKPDHITYVGVLTACT-----------HGGLVEQG--------QRYYNMMKNVHKIKPTP 550
+K + +T +L C+ HG +V G + N ++
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196
Query: 551 SHF-----------ASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHK 596
+ F S+ G Q+ N M L+ PD V +LSAC +
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256
Query: 597 NLDLGKIA---AEKLLLIEPDNSGAYSALCNLYSSC 629
+L GK A K ++E N +AL NLY SC
Sbjct: 257 DLKSGKAIHGFALKHGMVE--NVFVSNALVNLYESC 290
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/704 (35%), Positives = 401/704 (56%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+ ++ Y K G ++ A +F M D +SW T+I G + ++R+F+++++ +L
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 143 PTQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P QFT+TSVL +C++L + G++VH+ +K G+ V+ +L+++Y+K
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSK--------- 446
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
G+++ A F D+ +WN+M+ G++ + EA
Sbjct: 447 ----------------------GGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREA 484
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F+ ++ + K D+ T A+ A L +L+ GKQIHA +I+ F
Sbjct: 485 LRLFS-LMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRF------------ 531
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
+ ++ + +LD Y+K G++ AR++F+ + D VAWT
Sbjct: 532 ---------------------HYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ G +NG + A+ + M G +P+ YT + ++ S L +L+ GKQIHA+ ++
Sbjct: 571 TVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKL 630
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
A V +L+ MY+K GNI A +F ++ R + W +MIV LAQHG EEA+
Sbjct: 631 NCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVAL-WNAMIVGLAQHGNAEEALNF 689
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F M G+ PD +T++GVL+AC+H GL + ++ M+ + ++P H++ +VD L
Sbjct: 690 FNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALS 749
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG +QEA + +MP E + +LL+ACRV + + G+ AEKL ++P +S AY
Sbjct: 750 RAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVL 809
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y++ +WE+A + R MK V VKK GFSW+ ++NKVH+F D H + D IYNK
Sbjct: 810 LSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNK 869
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + IKE G+VPDT L D+EE+ KE L +HSEKLAIA+GL+ TP +TTLR++KN
Sbjct: 870 VEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKN 929
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+AIK+I + REIV+RDA RFHHF+ G+CSC DYW
Sbjct: 930 LRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 181/703 (25%), Positives = 306/703 (43%), Gaps = 159/703 (22%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P + + +K GL VF+ +L+N YAK + I A+ +FD MPV+ + WN ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 88 AYAKQGRLD-------------------------------------------LACEVFNL 104
AY + G D A ++F
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVC 256
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
+ D W + +Y + G A+ F +M++ +V T +L+ +L L G
Sbjct: 257 DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELG 316
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
K++H VV+ G V+V NS +NMY K +
Sbjct: 317 KQIHGAVVRFGWDQFVSVANSAINMYVK-------------------------------A 345
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G ++ AR F QM E D+++WN++I+G +++G + +L +F ++L+ S L PD+FT+ S
Sbjct: 346 GSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR-SGLLPDQFTITSV 404
Query: 285 LSACANLEK-LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L AC++LE+ +G+Q+H +C K G IV S +S
Sbjct: 405 LRACSSLEESYCVGRQVH-------------------TCALKAG-------IVLDSFVS- 437
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
T L+D Y K G + A +F + D+ +W AM+ G+ + ++A+ LF M
Sbjct: 438 ------TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLM 491
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
G K + T + + L L GKQIHA ++ L V + ++ MY K G +
Sbjct: 492 HERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEM 551
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
+AR+VFN I + V+WT++I ++G E+A+ + +M G++PD T+ ++ A
Sbjct: 552 KSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKA 610
Query: 524 CTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY------------ 570
C+ +EQG++ + N+MK P S+VD+ + G +++AY
Sbjct: 611 CSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSVA 668
Query: 571 -------------------NFIENMP---LEPDVVAWGSLLSACR-------VHKNLDLG 601
NF M + PD V + +LSAC +KN D
Sbjct: 669 LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFD-- 726
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
+ +K +EP+ YS L + S G ++A + SM +
Sbjct: 727 --SMQKTYGVEPEIE-HYSCLVDALSRAGHIQEAEKVVSSMPF 766
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/636 (26%), Positives = 288/636 (45%), Gaps = 118/636 (18%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
PS + P F +L+ + + +GK HA I+ GL+ ++ N+L+ YAK S+
Sbjct: 9 PSSLLPQWF--SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFS 66
Query: 67 AKKVFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
A+K+FD P + L ++N IL+AYA G L +++
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGEL-------------------------HDVE 101
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
+ A +F + Q +L T+ T++ + C G SA + + + VK GL V V
Sbjct: 102 KTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAG 161
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA-------------- 230
+L+N+YAK A+ +FD M +++V WNV++ ++ G D
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221
Query: 231 --------------RAQFDQMIER---------------DVVTWNSMIAGYSQNGYDFEA 261
+ F++ +E+ DV WN ++ Y Q G +EA
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEA 281
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ F +M+K S + D T LS A+L L+LGKQIH ++R +D V N+ I+
Sbjct: 282 VDCFRDMIK-SRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAIN 340
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K G V A RR+F +++ D+++W
Sbjct: 341 MYVKAGSVNYA---------------------------------RRMFGQMKEVDLISWN 367
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL-ASLDHGKQIHASALR 440
++ G ++GL + ++ LF ++R G P+ +T++++L SSL S G+Q+H AL+
Sbjct: 368 TVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALK 427
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ--ETVSWTSMIVALAQHGLGEEA 498
+G VS ALI +YSK G + A +F H + + SW +M+ EA
Sbjct: 428 AGIVLDSFVSTALIDVYSKGGKMEEAELLF---HNQDGFDLASWNAMMHGFTVSDNYREA 484
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASM 556
++LF M E G K D IT+ A ++QG++ + + V K++ F + +
Sbjct: 485 LRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV---VIKMRFHYDLFVISGI 541
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
+D+ + G ++ A +P PD VAW +++S C
Sbjct: 542 LDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC 576
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 148/355 (41%), Gaps = 83/355 (23%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA +IK H +F+ + +++ Y K + A+KVF+++P +W T++S +
Sbjct: 519 GKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVE 578
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A + TY+ +M V P ++T ++
Sbjct: 579 NGEEEQA------------------LFTYH-------------QMRLAGVQPDEYTFATL 607
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C+ L L GK++H+ ++K + V SL++MYAK G+ A +F M ++V
Sbjct: 608 VKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+ W N+MI G +Q+G EAL F N +K
Sbjct: 668 ALW-------------------------------NAMIVGLAQHGNAEEALNFF-NEMKS 695
Query: 272 SSLKPDKFTLASTLSACA----------NLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ PD+ T LSAC+ N + ++ Y + E + + +AL
Sbjct: 696 RGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ-----KTYGVEPEIEHYSCLVDAL-- 748
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
++ G ++ A+K+V + + TLL+ GD R+ + L D
Sbjct: 749 --SRAGHIQEAEKVVSSMPFE-ASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/758 (35%), Positives = 422/758 (55%), Gaps = 80/758 (10%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA-----YAK 91
++ +C S F ++++ A T S+ K V + +++ C + L Y+K
Sbjct: 40 CKMKECETKFSKFTLSTVLKGCANTGSLREGK-VLHALALRSGCEIDEFLGCSLVDMYSK 98
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A +VF + N D V+W+ +I ++ G + A +F M + P QFT++S+
Sbjct: 99 CGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSL 158
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++ T +GDL G+ +H + K G V+N L+ MY M ++ V DG ++
Sbjct: 159 VSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMY------MKSRCVEDGNKV--- 209
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG----MFAN 267
F+ M D+V+WN++++G+ YD + G +F
Sbjct: 210 ----------------------FEAMTNPDLVSWNALLSGF----YDSQTCGRGPRIFYQ 243
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML + KP+ FT S L +C++L + GKQ+HA+II+ D VG AL+ YAK
Sbjct: 244 MLLEG-FKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA- 301
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ +E +G++ FD L +RD+ +WT ++ GY
Sbjct: 302 ------RCLEDAGVA--------------------------FDRLVNRDIFSWTVIISGY 329
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q + AV+ FR M REG KPN YTL++ LS S +A+L++G+Q+HA A+++G +
Sbjct: 330 AQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDI 389
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V +AL+ +Y K G + A +F + R + VSW ++I +QHG GE+A++ F ML
Sbjct: 390 FVGSALVDLYGKCGCMEHAEAIFKGLISR-DIVSWNTIISGYSQHGQGEKALEAFRMMLS 448
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI PD T++GVL+AC+ GLVE+G++ ++ M ++ I P+ H+A MVD+LGRAG
Sbjct: 449 EGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFN 508
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
E FIE M L P + W ++L AC++H N+D G+ AA+KL +EP +Y L N+++
Sbjct: 509 EVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFA 568
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G+W+D NIR M G+KK G SWV++ +VHVF +D HP+ IY K+ K+
Sbjct: 569 SKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQ 628
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+ +G+VP T VLH+V K + L +HSE+LA++F L+ST +RI KNLR+C D
Sbjct: 629 SLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICED 688
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH +K I + ++EIVVRD RFHHFK+G CSC+D W
Sbjct: 689 CHDFMKLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 243/507 (47%), Gaps = 80/507 (15%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
++LA +F MP ++ VSW ++ Y ++G K +++F +M + + ++FT+++VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C G L GK +H+ +++G + SL++MY+K G V+D +++
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCG------TVYDALKV------ 108
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
F ++ DVV W++MI G Q G+ EA +F ++++
Sbjct: 109 -------------------FTKIRNPDVVAWSAMITGLDQQGHGQEAAELF-HLMRRKGA 148
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+P++FTL+S +S N+ L+ G+ IH I + F++ V N LI Y K VE
Sbjct: 149 RPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVE---- 204
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
DG ++F+++ + D+V+W A+L G+ +
Sbjct: 205 -------------------DG----------NKVFEAMTNPDLVSWNALLSGFYDSQTCG 235
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+F M+ EG KPN +T ++L SSL + GKQ+HA +++ V AL+
Sbjct: 236 RGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALV 295
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+KA + A F+ + R + SWT +I AQ E+A++ F +M GIKP+
Sbjct: 296 DMYAKARCLEDAGVAFDRLVNR-DIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNE 354
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF------ASMVDLLGRAGLLQE 568
T L+ C+H +E G + +H + HF +++VDL G+ G ++
Sbjct: 355 YTLASCLSGCSHMATLENG-------RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEH 407
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVH 595
A + + + D+V+W +++S H
Sbjct: 408 AEAIFKGL-ISRDIVSWNTIISGYSQH 433
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 204/477 (42%), Gaps = 101/477 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H I K G + N L+ Y K+ + KVF+ M L SWN +LS +
Sbjct: 171 GQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGF-- 228
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
DS + GR R+F +M+ + P FT SV
Sbjct: 229 ----------------YDSQT----------CGR---GPRIFYQMLLEGFKPNMFTFISV 259
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L SC++L D GK+VH+ ++K V +L++MYAK A FD + +++
Sbjct: 260 LRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDI 319
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW V++S GY+Q +A+ F M ++
Sbjct: 320 FSWTVIIS-------------------------------GYAQTDQAEKAVKYFRQMQRE 348
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+KP+++TLAS LS C+++ L+ G+Q+HA ++ VG+AL+ Y K G +E
Sbjct: 349 -GIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEH 407
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+ I F L RD+V+W ++ GY Q+G
Sbjct: 408 AEAI---------------------------------FKGLISRDIVSWNTIISGYSQHG 434
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVS 450
+ A+E FR M+ EG P+ T +LS S + ++ GK+ S + G S+
Sbjct: 435 QGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHY 494
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAI-QLFE 503
++ + +AG N + ++ ++ W +++ A HG GE+A +LFE
Sbjct: 495 ACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFE 551
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 132/296 (44%), Gaps = 70/296 (23%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN + IS L + LL +P GK VHA IIK F+ +L++ YAK
Sbjct: 251 PNMFTFISVLRSCSSLL-------DPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A FD + + + SW I+S YA+ + +
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAE--------------------------- 336
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
A++ F +M ++ + P ++T+ S L+ C+ + L G+++H+ VK G G + V
Sbjct: 337 ----KAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVG 392
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
++L+++Y K G A+A+F G+ +++ SWN ++S
Sbjct: 393 SALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIIS------------------------ 428
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
GYSQ+G +AL F ML + + PD+ T LSAC+ + ++ GK+
Sbjct: 429 -------GYSQHGQGEKALEAFRMMLSE-GIMPDEATFIGVLSACSFMGLVEEGKK 476
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 108/248 (43%), Gaps = 40/248 (16%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L +H+ + L++ G+ +HA +K G +F+ ++L++ Y K
Sbjct: 352 PNEYTLASCLSGCSHM--ATLEN-----GRQLHAVAVKAGHFGDIFVGSALVDLYGKCGC 404
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ +A+ +F + + + SWNTI+S Y++ G+ + A E F +
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRM------------------- 445
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNV 182
M+ + ++P + T VL++C+ +G + GKK + K G++ +
Sbjct: 446 ------------MLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEH 493
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVS-SWNVVVSLHIHSGRLDLARAQFDQMIERD 241
++++ + G K + M L S W V+ G +D ++ E +
Sbjct: 494 YACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEME 553
Query: 242 VVTWNSMI 249
+ +S I
Sbjct: 554 PMMDSSYI 561
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/555 (43%), Positives = 368/555 (66%), Gaps = 8/555 (1%)
Query: 234 FDQMIER-DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
F++ +++ +V +WNS+IA +++G EAL F++M K SLKP++ T + +C+ L
Sbjct: 32 FNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK-LSLKPNRSTFPCAIKSCSALL 90
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L G+Q H + F+ V +AL+ Y+K G + A+ + ++ IS+ N++++T++
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDE--ISHRNIVSWTSM 148
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPN 411
+ GY++ D A R+FD + +RDV++W +++ Y QNG++ +++E+F MV++G N
Sbjct: 149 ITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYN 208
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
TLSA+L + S GK IH ++ G S++ V ++I MY K G + AR+ F+
Sbjct: 209 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268
Query: 472 LIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ R++ V SW++M+ HG +EA+++F M G+KP++IT+V VL AC+H GL+
Sbjct: 269 RM--REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 326
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
E+G ++ M + ++P H+ MVDLLGRAG L+EA++ I+ M L PD V WG+LL
Sbjct: 327 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLG 386
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
ACR+HKN+DLG+I+A KL ++P N G Y L N+Y+ G+WED +R MK G+ K
Sbjct: 387 ACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP 446
Query: 651 QGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVK 710
GFS V I+ +VHVF V D HPQ + IY + K+ +++E+G+VPD SVLHDV + K
Sbjct: 447 PGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEK 506
Query: 711 EQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATR 770
E +LR HSEKLA+AFG+++T TT+ I+KNLRVC DCH+AIKFI K+VDREIVVRD+ R
Sbjct: 507 EMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKR 566
Query: 771 FHHFKKGLCSCRDYW 785
FHHF+ GLCSC DYW
Sbjct: 567 FHHFRDGLCSCGDYW 581
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 251/534 (47%), Gaps = 62/534 (11%)
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV-SWTTIIVTYNEIGRFK 127
K+ + V SW Y+ L +FN ++ +V SW ++I G
Sbjct: 2 KISNSTSVVITFSWKIYRRRYSNNPNL---TTLFNKYVDKTNVFSWNSVIAELARSGDSV 58
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+R F M + + P + T + SC+AL DL +G++ H + G + V+++L+
Sbjct: 59 EALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALV 118
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+MY+K G+ A+ +FD + +N+ SW +++ ++ + A FD M ERDV++WNS
Sbjct: 119 DMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNS 178
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+IA Y+QNG E++ +F M+KD + + TL++ L ACA+ +LGK IH +I+
Sbjct: 179 IIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM 238
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
++ VG ++I Y K G VE+ AR+
Sbjct: 239 GLESNVFVGTSIIDMYCKCGKVEM---------------------------------ARK 265
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
FD +R+++V +W+AM+ GY +G K+A+E+F M G KPN T ++L+ S
Sbjct: 266 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 325
Query: 428 LDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
L+ G A + + ++ + +AG + A + + R + V W +++
Sbjct: 326 LEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 385
Query: 487 VALAQH---GLGE-EAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMK 541
A H LGE A +LFE + P + Y +L+ G E +R +MK
Sbjct: 386 GACRMHKNVDLGEISARKLFE------LDPKNCGYYVLLSNIYADAGRWEDVERMRILMK 439
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLL----------QEAYNFIENMPLEPDVVAW 585
N +KP P S+VD+ GR + ++ Y ++E + ++ V +
Sbjct: 440 NSGLVKP-PGF--SLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 490
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 133/267 (49%), Gaps = 33/267 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ H + + G +F+ ++L++ Y+K + A+ +FDE+ + + SW ++++ Y +
Sbjct: 95 GRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 154
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTS 150
A VF+ M RD +SW +II Y + G ++ +F MV+D ++ T+++
Sbjct: 155 NDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSA 214
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL +C G GK +H V+K GL V V S+++MY K G MA+ FD MR KN
Sbjct: 215 VLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN 274
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V S W++M+AGY +G+ EAL +F M
Sbjct: 275 VKS-------------------------------WSAMVAGYGMHGHAKEALEVFYEM-N 302
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLG 297
+ +KP+ T S L+AC++ L+ G
Sbjct: 303 MAGVKPNYITFVSVLAACSHAGLLEEG 329
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 48/262 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H ++IK GL +VF+ S+++ Y K + A+K FD M K + SW+ +++ Y
Sbjct: 227 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 286
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G K A+ +F EM V P T S
Sbjct: 287 MHGHA-------------------------------KEALEVFYEMNMAGVKPNYITFVS 315
Query: 151 VLASCTALGDLSAG-----KKVHSFVVKTGLS--GCVNVTNSLLNMYAKVGDEMMAKAVF 203
VLA+C+ G L G H F V+ G+ GC ++++ + G A +
Sbjct: 316 VLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC------MVDLLGRAGYLKEAFDLI 369
Query: 204 DGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV--VTWNSMIAGYSQNGYDFE 260
GM+L+ + W ++ +DL ++ E D + +++ + +E
Sbjct: 370 KGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWE 429
Query: 261 ALGMFANMLKDSSL-KPDKFTL 281
+ ++K+S L KP F+L
Sbjct: 430 DVERMRILMKNSGLVKPPGFSL 451
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 270/749 (36%), Positives = 411/749 (54%), Gaps = 75/749 (10%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLD 96
A I + +++ SL N + K + + A+ +FD++P L + +++ Y + RL
Sbjct: 2 AHITRYTRTITLSYTTSLAN-HLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLC 60
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
A ++F+ M RD VSW ++I + G A R+F EM + V+
Sbjct: 61 DALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISW------------ 108
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
+++N Y K G +A+ +F M +K+V++WN
Sbjct: 109 ---------------------------TTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNA 141
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+V + +GR++ F++M RDV++W SMI G NG EAL +F ML+ S ++P
Sbjct: 142 MVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLR-SGVEP 200
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
T A LSACAN + LG Q+H ++++ + +LI+ YA +E A KI
Sbjct: 201 TWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKI- 259
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
F+ ++VV WTA+L Y N ++DA
Sbjct: 260 --------------------------------FNETLTKNVVKWTALLTAYVWNNKHQDA 287
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ +F M + G PN T S L L +LD GK+IH A++ G + + V N+L+ M
Sbjct: 288 LRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVM 347
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y++ GN+N+A VF I+ ++ VSW S+IV AQHG G A+ F +M+ G+ P+ IT
Sbjct: 348 YTECGNVNSAVAVFRNIN-EKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEIT 406
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+ G+L+AC+ G++ +G+ ++ + P H+A MVD+LGR G L EA + M
Sbjct: 407 FTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYM 466
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P++ + + W +LLSACRVH NL++ + AA+ +L +EP+ S AY L N+Y+S G+W D +
Sbjct: 467 PVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVS 526
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
+R MK G+ K G SWV ++ K H F D HP + IY K+ + ++KE G+VP
Sbjct: 527 RMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVP 586
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
D LHDVE++ KE+ML HSE+LAIAFGL+ST E +T+ +MKNLRVC DCHS IK +
Sbjct: 587 DQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMS 646
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+V R+IVVRD+ RFHHFK G+CSC DYW
Sbjct: 647 KIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 237/538 (44%), Gaps = 96/538 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L ++LK++ +L+ +I LHL ++ Y + + + A K+FD M
Sbjct: 15 YTTSLANHLKNQRLDQARLIFDKIPSPNLHLY----TKMIAGYTRNDRLCDALKLFDRMS 70
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
V+ + SWN+++ G L +A +F+ MP ++ +SWTT++ Y + GR + A R+F++
Sbjct: 71 VRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLD 130
Query: 136 M--------------------VQDQV-LPTQFTVTSVLASCTALGDLSAGKK------VH 168
M V++ V L + V V++ + +G L K V
Sbjct: 131 MHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVF 190
Query: 169 SFVVKTG-----------LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
++++G LS C N N+ +V ++ F +VS +
Sbjct: 191 KKMLRSGVEPTWSTFACVLSACANAVE--FNLGVQVHGHVVKLGCF-FHEFISVS----L 243
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
++ + + +++ A F++ + ++VV W +++ Y N +AL +F +M K +L P+
Sbjct: 244 ITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGAL-PN 302
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+ T + TL AC LE L GK+IH I+ + VGN+L+ Y +
Sbjct: 303 QSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTEC----------- 351
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
G++ A +F ++ ++D+V+W +++VG Q+G A+
Sbjct: 352 ----------------------GNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWAL 389
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK-------QIHASALRSGEASSLSVS 450
F M+R G PN T + +LS S L G+ + ++ LR +
Sbjct: 390 IFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYA----- 444
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ + + G ++ A + + + ++ W +++ A H E A + + +L+L
Sbjct: 445 -CMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDL 501
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/657 (39%), Positives = 389/657 (59%), Gaps = 23/657 (3%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
+LPT F SC L + +H+ +GL+ V +SLL+ Y ++G A
Sbjct: 21 HLLPTAFK------SCPTL---PLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNA 71
Query: 200 KAVFDGMRL--KNVSSWNVVVSLHIHSGRLDLARAQFDQM-----IERDVVTWNSMIAGY 252
+A+FDGM + V W+ +V+ H G + A ++M +E +V+TWN +++G
Sbjct: 72 RALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGL 131
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+++G +A+ A M + L+PD ++ LSA ++ + +G+Q+H Y ++ A
Sbjct: 132 NRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRAD 191
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V ALI Y K G ++ ++S S+++V + L+ G + + A R+F
Sbjct: 192 ACVVTALIDMYGKCGQAAEVVRVFDES--SHMDVASCNALIAGLSRNAQVCEALRLFKEF 249
Query: 373 RDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
DR +VV+WT+++ QNG + +AVE FR M +G +PN+ T+ +L +++A+L
Sbjct: 250 VDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAAL 309
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
HG+ H ALR G + VS+AL+ MY+K G + AR +F+ + R VSW +MI
Sbjct: 310 MHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRN-VVSWNAMIGG 368
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
A +G A+ +F ML+ KPD +T+ +L ACT GL E+G+ Y+ M N + + P
Sbjct: 369 YAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSP 428
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+A MV LLGRAG L EAY+ I +MP EPD WGSLL +CRVH N+DL ++AAEKL
Sbjct: 429 RMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKL 488
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+EP+N+G Y L N+Y+S W+ +R+ MK VG+KK +G SW++I+NKVH+
Sbjct: 489 FHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAG 548
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D HP AI K+ ++ +++++GFVP T VLHDVEE K+ +L HSEKLA+A GLI
Sbjct: 549 DDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLI 608
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ST TTLR++KNLR+C DCH A+KFI REI VRD RFHHF G CSC D+W
Sbjct: 609 STSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/545 (25%), Positives = 251/545 (46%), Gaps = 59/545 (10%)
Query: 18 HLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM-- 74
HLL + KS + + +HA GL F+ +SL++ Y + + A+ +FD M
Sbjct: 21 HLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPR 80
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS------VSWTTIIVTYNEIGRFKN 128
P +T+ W+ +++A+A +G + A + M RD ++W ++ N GR ++
Sbjct: 81 PQRTVVGWSALVAAHAARGDAEGAWRLLEEM-RRDGGVEPNVITWNGLVSGLNRSGRARD 139
Query: 129 AIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+ M + +L P V+ L++ +G +S G+++H + VK G V +L+
Sbjct: 140 AVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALI 199
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR----LDLARAQFDQMIERDVV 243
+MY K G VFD +V+S N +++ + + L L + D+ +E +VV
Sbjct: 200 DMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVV 259
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W S++A QNG D EA+ F M + +P+ T+ L A AN+ L G+ H +
Sbjct: 260 SWTSIVACCVQNGKDLEAVEFFREM-QAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCF 318
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+R F V +AL+ YAK G V+ A
Sbjct: 319 ALRKGFLHDVYVSSALVDMYAKCGRVKDA------------------------------- 347
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
R IFD++ R+VV+W AM+ GY G +AV +F SM++ KP+ T + +L+ +
Sbjct: 348 --RIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACT 405
Query: 424 SLASLDHG----KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
+ G K++H G + + ++T+ +AG ++ A + + + + +
Sbjct: 406 QAGLTEEGRHYFKEMHN---EYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDA 462
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYN 538
W S++ + HG + A E++ L +P++ YV + + ++ R
Sbjct: 463 YIWGSLLGSCRVHGNVDLAEVAAEKLFHL--EPENAGNYVLLSNIYASKKMWDRVNRVRE 520
Query: 539 MMKNV 543
MMK+V
Sbjct: 521 MMKDV 525
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/770 (34%), Positives = 417/770 (54%), Gaps = 101/770 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y + LD A +VF MP RD VSW ++I YN G + A+ ++ V+
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +T++SVL +C LG + G +H + K G+ V V N LL+MY K +
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF------NGL 267
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
DG R+ FD+M+ RD V+WN+MI GYSQ G E++
Sbjct: 268 IDGRRI-------------------------FDKMVLRDAVSWNTMICGYSQVGLYEESI 302
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN----- 317
+F M+ + KPD T+ S L AC +L L+ GK +H Y+I + ++ N
Sbjct: 303 KLFMEMV--NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINM 360
Query: 318 --------------------------ALISCYAKVGGVEIAQKI-------VEQSGISYL 344
++I+ Y + G + A K+ V+ ++Y+
Sbjct: 361 YAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYV 420
Query: 345 -----------------------------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N++ TL+D Y K G++G + ++F++++ R
Sbjct: 421 MLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR 480
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D++ W ++ + + + M EG P+ T+ ++L V S LA+ GK+IH
Sbjct: 481 DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH 540
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ G S + V N LI MYSK G++ + +VF L+ ++ V+WT++I A +G G
Sbjct: 541 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGEG 599
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
++A++ F M GI PDH+ +V ++ AC+H GLVE+G Y++ MK +KI+P H+A
Sbjct: 600 KKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC 659
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VDLL R+ LL +A +FI +MPL+PD WG+LLSACR+ + ++ + +E+++ + PD+
Sbjct: 660 VVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDD 719
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+G Y + N+Y++ GKW+ +IRKS+K G+KK G SW++IQNKV+VFG Q
Sbjct: 720 TGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQF 779
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ + + + + + G++ + VLHD++ED K +L HSE+LAIAFGL++T T
Sbjct: 780 EEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTP 839
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L++MKNLRVC DCH+ K+I K+V RE++VRDA RFH FK G CSC DYW
Sbjct: 840 LQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 169/601 (28%), Positives = 281/601 (46%), Gaps = 110/601 (18%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD-EMPVKTLCSWNTILSAYAKQG 93
+H+ II GLH SV L+ YA + + VF P + WN+I+ A
Sbjct: 35 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRA----- 89
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+T+N G F A+ ++ E + ++ P +T SV+
Sbjct: 90 ------------------------LTHN--GLFSEALSLYSETQRIRLQPDTYTFPSVIN 123
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+C L D K +H V+ G + + N+L++MY + D A+ VF+ M L++V S
Sbjct: 124 ACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS 183
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
WNS+I+GY+ NGY EAL ++ ++
Sbjct: 184 -------------------------------WNSLISGYNANGYWNEALEIYYR-FRNLG 211
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+ PD +T++S L AC L ++ G IH I + V N L+S Y K
Sbjct: 212 VVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK-------- 263
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
F L+DG RRIFD + RD V+W M+ GY Q GL
Sbjct: 264 ---------------FNGLIDG----------RRIFDKMVLRDAVSWNTMICGYSQVGLY 298
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+++++LF MV + KP+ T++++L L L+ GK +H + SG + SN L
Sbjct: 299 EESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 357
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K GN+ A++ VF+ + + ++VSW SMI Q+G +EA++LF +M++ +KPD
Sbjct: 358 INMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPD 415
Query: 514 HITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+TYV +L+ T G + G+ + ++ K S+ ++VD+ + G + ++
Sbjct: 416 SVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSN--TLVDMYAKCGEMGDSLKV 473
Query: 573 IENMPLEPDVVAWGSLLSACRVHK---NLDLGKIAAEKLLLIEPDNSGAYSAL--CNLYS 627
ENM D++ W +++++C VH NL L I+ + + PD + S L C+L +
Sbjct: 474 FENMKAR-DIITWNTIIASC-VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLA 531
Query: 628 S 628
+
Sbjct: 532 A 532
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 145/342 (42%), Gaps = 42/342 (12%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
M+T P ++ Y LL + + + +GK +H + K G + ++ + N+L++ YAK
Sbjct: 408 MKTDVKPDSVT----YVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAK 463
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ + KVF+ M + + +WNTI+++ +L
Sbjct: 464 CGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL----------------------- 500
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+RM M + V P T+ S+L C+ L GK++H + K GL V
Sbjct: 501 --------GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 552
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM--- 237
V N L+ MY+K G + VF M+ K+V +W ++S G A F +M
Sbjct: 553 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 612
Query: 238 -IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
I D V + ++I S +G E L F M KD ++P A + L + L
Sbjct: 613 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL---LSRSAL 669
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+ +I+ + AL+S G EIA+++ E+
Sbjct: 670 LDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSER 711
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 420 SVSSSLASLDHGKQIH---ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
S+S +LAS Q+H + + G S+ S LI Y+ + ++ VF L
Sbjct: 18 SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 77
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
W S+I AL +GL EA+ L+ + ++PD T+ V+ AC GL++
Sbjct: 78 NNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLD----- 130
Query: 537 YNMMKNVHKIKPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ M K++H + F S ++D+ R L +A E MPL DVV+W SL+
Sbjct: 131 FEMAKSIHD-RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLI 188
Query: 590 SA 591
S
Sbjct: 189 SG 190
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/727 (37%), Positives = 409/727 (56%), Gaps = 70/727 (9%)
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
E + YA VF+ + L WNT+ +A L P D VS
Sbjct: 11 EGLPYAISVFETIQEPNLLIWNTMFRGHA-------------LSP--DPVS--------- 46
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
A++++V M+ +LP +T +L SC L G ++H V+K G +
Sbjct: 47 -------ALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLY 99
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V SL++MY + A VFD ++V S+ +V+ + G ++ AR FD++ +D
Sbjct: 100 VHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKD 159
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
VV+WN+MI+GY + G EAL +F M+K ++++PD+ T+ + +SA A ++LG+Q+H
Sbjct: 160 VVSWNAMISGYVETGNYKEALELFKEMMK-TNVRPDESTMVTVISASARSGSIELGRQVH 218
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
++I F + + NALI D Y K G+
Sbjct: 219 SWIADHGFGSNLKIVNALI---------------------------------DFYSKCGE 245
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A +F L +DV++W ++ GY L K+A+ LF+ M+R G PN+ T+ ++L
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305
Query: 422 SSSLASLDHGKQIHASALR--SGEASSLSVSNALITMYSKAGNINAARRVFN-LIHWRQE 478
+ L ++D G+ IH + G ++ S+ +LI MYSK G+I AA +VFN ++H +
Sbjct: 306 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLH--KS 363
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+W +MI A HG A +F RM + IKPD IT+VG+L+AC+H G+++ G+ +
Sbjct: 364 LPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFR 423
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M + +KI P H+ M+DLLG +GL +EA I M +EPD V W SLL AC++H N+
Sbjct: 424 SMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNV 483
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+LG+ A+ L IEP+N G+Y L N+Y++ G+W + A IR + G+KK G S ++I
Sbjct: 484 ELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEI 543
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
+ VH F + D HP+ IY + ++ ++E GFVPDT+ VL ++EE+ KE LRHHS
Sbjct: 544 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHS 603
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLAIAFGLIST T L I+KNLRVC +CH A K I K+ REI+ RD TRFHHF+ G+
Sbjct: 604 EKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGV 663
Query: 779 CSCRDYW 785
CSC DYW
Sbjct: 664 CSCNDYW 670
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 252/554 (45%), Gaps = 101/554 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S K + G +H ++K G L +++ SL++ Y + E + A KVFD
Sbjct: 66 FPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSS 125
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G ++ A +F+ +P +D VSW +I Y E G +K A+ +F E
Sbjct: 126 HRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +V+++ G + G++VHS++ G + + N+L++ Y+K G+
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE 245
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F G+ K+V SWN+ +I GY+
Sbjct: 246 METACGLFLGLSYKDVISWNI-------------------------------LIGGYTHL 274
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI +
Sbjct: 275 NLYKEALLLFQEMLR-SGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDK--------- 324
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
++ GV A + T+L+D Y K GDI A ++F+S+ +
Sbjct: 325 ---------RLKGVTNASSLR-------------TSLIDMYSKCGDIEAAHQVFNSMLHK 362
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ AW AM+ G+ +G A ++F M + KP++ T +LS S LD G+ I
Sbjct: 363 SLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIF 422
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
S N IT + + MI L GL
Sbjct: 423 RSM----------THNYKIT---------------------PKLEHYGCMIDLLGHSGLF 451
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP-TPSHFA 554
+EA ++ M ++PD + + +L AC G VE G+++ +N+ KI+P P +
Sbjct: 452 KEAEEMISTMT---MEPDGVIWCSLLKACKMHGNVELGEKF---AQNLFKIEPNNPGSYV 505
Query: 555 SMVDLLGRAGLLQE 568
+ ++ AG E
Sbjct: 506 LLSNIYATAGRWNE 519
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 225/425 (52%), Gaps = 9/425 (2%)
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
H L A + F+ + E +++ WN+M G++ + AL ++ M+ L P+ +T
Sbjct: 9 HFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMI-SLGLLPNSYTFP 67
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
L +CA L+ K G QIH ++++ ++ V +LIS Y + +E A K+ ++S S
Sbjct: 68 FLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRS--S 125
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
+ +V+++T L+ GY G I AR +FD + +DVV+W AM+ GY + G K+A+ELF+
Sbjct: 126 HRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKE 185
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M++ +P+ T+ ++S S+ S++ G+Q+H+ G S+L + NALI YSK G
Sbjct: 186 MMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE 245
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A +F + ++ + +SW +I L +EA+ LF+ ML G P+ +T + +L
Sbjct: 246 METACGLFLGLSYK-DVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILH 304
Query: 523 ACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC H G ++ G+ + + K + + S S++D+ + G ++ A+ +M L
Sbjct: 305 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKS 363
Query: 582 VVAWGSLLSACRVH--KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
+ AW +++ +H N + + I+PD+ + L + S G + +I
Sbjct: 364 LPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDI-TFVGLLSACSHAGMLDLGRHIF 422
Query: 640 KSMKY 644
+SM +
Sbjct: 423 RSMTH 427
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/771 (34%), Positives = 417/771 (54%), Gaps = 99/771 (12%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FYA L+ S K +HAR++ GL S FL L++ + I++A++VFD++
Sbjct: 23 FYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P W II Y+ F++A+ M+
Sbjct: 80 -------------------------------PRPQIFPWNAIIRGYSRNNHFQDALLMYS 108
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M +V P FT +L +C+ L L G+ VH+ V + G V V N L+ +YAK
Sbjct: 109 NMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR 168
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ VF+G+ L ER +V+W ++++ Y+Q
Sbjct: 169 RLGSARTVFEGLPLP-----------------------------ERTIVSWTAIVSAYAQ 199
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG EAL +F+ M K +KPD L S L+A L+ LK G+ IHA +++
Sbjct: 200 NGEPMEALEIFSQMRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM------- 251
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
G+EI ++ I+ T+ Y K G + A+ +FD ++
Sbjct: 252 -------------GLEIEPDLL----------ISLNTM---YAKCGQVATAKILFDKMKS 285
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+++ W AM+ GY +NG ++A+++F M+ + +P+ ++++ +S + + SL+ + +
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+ RS + +S+ALI M++K G++ AR VF+ R + V W++MIV HG
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGR 404
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EAI L+ M G+ P+ +T++G+L AC H G+V +G ++N M + HKI P H+A
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYA 463
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
++DLLGRAG L +AY I+ MP++P V WG+LLSAC+ H++++LG+ AA++L I+P
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L NLY++ W+ A +R MK G+ K G SWV+++ ++ F V D HP+
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+ I ++ I +KE GFV + + LHD+ ++ E+ L HSE++AIA+GLISTP+ T
Sbjct: 584 YEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGT 643
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRI KNLR C +CH+A K I KLVDREIVVRD RFHHFK G+CSC DYW
Sbjct: 644 PLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/704 (35%), Positives = 412/704 (58%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK GR++ A VF M RD VSW T++ + + +A+ F +M
Sbjct: 287 NALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQK 346
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P Q +V +++A+ G+L GK+VH++ ++ GL + + N+L++MYAK
Sbjct: 347 PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKC--------- 397
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
V H+ F+ M E+D+++W ++IAGY+QN + EA+
Sbjct: 398 -------------CCVKYMGHA---------FECMHEKDLISWTTIIAGYAQNEFHLEAI 435
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ++ + D + S L AC+ L+ ++IH Y+ + + A + NA+++
Sbjct: 436 NLFRK-VQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNV 493
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y +VG ++ A RR F+S+R +D+V+WT+
Sbjct: 494 YGEVGHIDYA---------------------------------RRAFESIRSKDIVSWTS 520
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ NGL +A+ELF S+ + +P++ + + LS +++L+SL GK+IH +R G
Sbjct: 521 MITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKG 580
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++++L+ MY+ G + +R++F+ + R + + WTSMI A HG G +AI LF
Sbjct: 581 FFLEGPIASSLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMINANGMHGCGNKAIALF 639
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + + PDHIT++ +L AC+H GL+ +G+R++ +MK ++++P P H+A MVDLL R
Sbjct: 640 KKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSR 699
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+ L+EAY+F+ NMP++P W +LL AC +H N +LG++AA++LL + +NSG Y+ +
Sbjct: 700 SNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALI 759
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N++++ G+W D +R MK G+KK G SW+++ NK+H F D HPQ D IY K+
Sbjct: 760 SNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKL 819
Query: 683 AKIWDEI-KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
A+ + K+ G++ T V H+V E+ K QML HSE+LA+ +GL+ TP+ T +RI KN
Sbjct: 820 AQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKN 879
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C+DCH+ K ++ R +VVRDA RFHHF++GLCSC D+W
Sbjct: 880 LRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 172/632 (27%), Positives = 281/632 (44%), Gaps = 121/632 (19%)
Query: 3 TPNPPSLISPLEFYAH--LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+ +P + S LE +AH LL + ++ G+ +HA ++K HLS FL L+ Y K
Sbjct: 35 STHPLATPSRLE-HAHSLLLDLCVAAKALPQGQQLHALLLKS--HLSAFLATKLVLMYGK 91
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
S+ A KVFDEM +T+ SWN ++ A+
Sbjct: 92 CGSLRDAVKVFDEMSERTIFSWNALMGAFVSS---------------------------- 123
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
G++ AI ++ +M V T SVL +C ALG+ G ++H VK G V
Sbjct: 124 ---GKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFV 180
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDG--MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
V N+L+ MY K GD A+ +FDG M ++ SWN ++S H+ G
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC----------- 229
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
EAL +F M ++ + + +T + L + +KLG
Sbjct: 230 --------------------LEALSLFRRM-QEVGVASNTYTFVAALQGVEDPSFVKLGM 268
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
IH ++++ A V NALI+ YAK G +E A ++
Sbjct: 269 GIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRV----------------------- 305
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
F+S+ RD V+W +L G QN L DA+ FR M G KP+ ++ +
Sbjct: 306 ----------FESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNL 355
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
++ S +L GK++HA A+R+G S++ + N L+ MY+K + F +H ++
Sbjct: 356 IAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMH-EKD 414
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+SWT++I AQ+ EAI LF ++ G+ D + VL AC+ G + N
Sbjct: 415 LISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS-------GLKSRN 467
Query: 539 MMKNVHK--IKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
++ +H K + ++V++ G G + A E++ D+V+W S+++ C
Sbjct: 468 FIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIR-SKDIVSWTSMITCC- 525
Query: 594 VHKNLDLGKIA---AEKLLLIEPDNSGAYSAL 622
VH L + + + K I+PD+ SAL
Sbjct: 526 VHNGLPVEALELFYSLKQTNIQPDSIAIISAL 557
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/798 (33%), Positives = 435/798 (54%), Gaps = 75/798 (9%)
Query: 30 FVGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
F+G +H +IK GL S + ++ M FY + S+ +A K+FDEM
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEM-------------- 49
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
P RD ++W I++ G ++ A+ +F EM T+
Sbjct: 50 -----------------PKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+L C+ + G+++H +V++ GL V++ NSL+ MY++ G +++ VF+ M+
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGM 264
+N+SSWN ++S + G +D A D+M ++ D+VTWNS+++GY+ G +A+ +
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
M + + LKP +++S L A A LKLGK IH YI+R + V LI Y
Sbjct: 213 LKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 325 KVGGVEIAQKIVEQ-------------SGISYL--------------------NVIAFTT 351
K G + A+ + + SG+SY + I + +
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 352 LLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
L GY +G A + ++++ +VV+WTA+ G +NG ++A+++F M EG
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
PN T+S +L + L+ L GK++H LR V+ AL+ MY K+G++ +A
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+F I + SW M++ A G GEE I F MLE G++PD IT+ VL+ C +
Sbjct: 452 EIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV++G +Y+++M++ + I PT H + MVDLLGR+G L EA++FI+ M L+PD WG+
Sbjct: 511 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGA 570
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LS+C++H++L+L +IA ++L ++EP NS Y + NLYS+ +WED IR M+ V
Sbjct: 571 FLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV 630
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
+ +SW+QI VH+F E HP IY ++ K+ E+K+ G+VPDT+ + D+ +
Sbjct: 631 RVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISD 690
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
KE++L H+EKLA+ +GLI +R++KN +C+D H+ K++ L +REIV+++
Sbjct: 691 SEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQE 750
Query: 768 ATRFHHFKKGLCSCRDYW 785
R HHF+ G CSC D W
Sbjct: 751 GARVHHFRDGKCSCNDSW 768
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 71/313 (22%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
+ LLQ+ + + +GK +H I++ L V+++ +L++ Y KT + YA+ VFD M
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 77 KTLCSWNTIL-----------------------------------SAYAKQGRLDLACEV 101
K + +WN+++ S YA G+ + A +V
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 102 FNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
M + + VSWT I ++ G F+NA+++F++M ++ V P T++++L
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Query: 158 LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
L L +GK+VH F ++ L V +L++MY K GD A +F G++ K+++SWN
Sbjct: 409 LSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC- 467
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
M+ GY+ G E + F+ ML ++ ++PD
Sbjct: 468 ------------------------------MLMGYAMFGRGEEGIAAFSVML-EAGMEPD 496
Query: 278 KFTLASTLSACAN 290
T S LS C N
Sbjct: 497 AITFTSVLSVCKN 509
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 283/822 (34%), Positives = 434/822 (52%), Gaps = 106/822 (12%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V ARI+K G + N + + I+ A+++FDEMP + S N ++S Y K
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A E+F M +R+ VSWT +I Y++ + K A ++ EM + V P T ++L+
Sbjct: 93 LFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG 152
Query: 155 CTALGDLSAGKKVHSFVVKTGLSG----------------CVNVT--------------- 183
L ++HS +++ G S C+++
Sbjct: 153 FDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSF 212
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMR----------------------------------LK 209
N ++ Y K G A +F MR +K
Sbjct: 213 NVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIK 272
Query: 210 NVSSWNVVVS---LHIHSGR--LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
W++ V+ L +S +DLA+ FD+M E D V++N +I GY+ NG ++ +
Sbjct: 273 TSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDL 332
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F L+ +S F A+ LS A L +G+Q HA + T + VGNAL+ YA
Sbjct: 333 FKR-LQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYA 391
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K E A RIF +L R+ V WTA++
Sbjct: 392 KCEKFE---------------------------------DANRIFANLAYRNSVPWTAII 418
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y Q G +++A+++F+ M RE + T ++ L S++LAS+ GKQ+H+S +R G
Sbjct: 419 SIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLL 478
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
SS+ + L+ MY+ G++ A VF + R V W ++I A +Q+G E F
Sbjct: 479 SSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRN-IVCWNALISAYSQNGDAEATFSSFAD 537
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M+E G+ PD ++++ VLTAC+H GLVE+ Y+N M V+K+ P H+A+M+D+L R+G
Sbjct: 538 MIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSG 597
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSALC 623
EA N I MP EPD V W S+L++CR+HKN DL K AA++L ++ ++ AY +
Sbjct: 598 RFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMS 657
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ GKWE+AA ++K+M+ GVKK +SWV+I ++VHVF D HPQ + I K+
Sbjct: 658 NIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKIN 717
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ + + + G+ PDT+ L +V+E++K + L++HSE+LAIAF LI+TPE + + IMKNLR
Sbjct: 718 SLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLR 777
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+AIK I K+V REI VRD++RFHHF+ G CSC DYW
Sbjct: 778 ACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 186/443 (41%), Gaps = 79/443 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L ++ S + G+ +H IK +F+ N+L++FY+K + I AK +FDEMP
Sbjct: 247 FAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTI--------------- 116
S+N I++ YA G+ + + ++F + +R + + T+
Sbjct: 307 ELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQ 366
Query: 117 -----IVT---------------YNEIGRFKNAIRMFV---------------------- 134
+VT Y + +F++A R+F
Sbjct: 367 THAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGF 426
Query: 135 ---------EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
EM ++ V Q T S L + L +S GK++HS V++ GL V +
Sbjct: 427 HEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSV 486
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----D 241
L++MYA G A VF M +N+ WN ++S + +G + + F MIE D
Sbjct: 487 LVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPD 546
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V++ S++ S G +AL F +M + L P + A+ + + + +
Sbjct: 547 SVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENL- 605
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ--SGISYLNVIAFTTLLDGYIKI 359
I F+ + +++++ ++A+K +Q + + A+ + + Y +
Sbjct: 606 --ISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEA 663
Query: 360 GDIGPARRIFDSLRDRDVVAWTA 382
G A ++ ++R+R V TA
Sbjct: 664 GKWENAAKVKKAMRERGVKKVTA 686
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/712 (37%), Positives = 402/712 (56%), Gaps = 76/712 (10%)
Query: 82 WNTILSA-----YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
WN ++A Y++ G +A +F+ MP RD SW +I + G A+ + EM
Sbjct: 248 WNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM 307
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ + TV S+L C LGD+S +H +V+K GL + V+N+L+NMYAK G+
Sbjct: 308 RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN- 366
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
L+ AR F QM DVV+WNS+IA Y QN
Sbjct: 367 ------------------------------LEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV- 315
A G F M + + +PD TL S S A K + +H +I+R + V
Sbjct: 397 DPVTAHGFFVKM-QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVI 455
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNA++ YAK+G LLD A ++F+ + +
Sbjct: 456 GNAVVDMYAKLG------------------------LLDS---------AHKVFEIIPVK 482
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK--PNNYTLSAMLSVSSSLASLDHGKQ 433
DV++W ++ GY QNGL +A+E+++ M+ E + PN T ++L + + +L G +
Sbjct: 483 DVISWNTLITGYAQNGLASEAIEVYK-MMEECKEIIPNQGTWVSILPAYAHVGALQQGMK 541
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IH +++ + V+ LI +Y K G + A +F + ++ +V+W ++I HG
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHG 600
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
E+ ++LF ML+ G+KPDH+T+V +L+AC+H G VE+G+ + +M+ + IKP+ H+
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHY 659
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
MVDLLGRAG L+ AY+FI++MPL+PD WG+LL ACR+H N++LGK A+++L ++
Sbjct: 660 GCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDS 719
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
N G Y L N+Y++ GKWE +R + G+KKT G+S +++ KV VF + HP
Sbjct: 720 KNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHP 779
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ IY ++ + ++K +G++PD + VL DVEED KE +L HSE+LAIAFG+ISTP
Sbjct: 780 KCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPK 839
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +RI KNLRVC DCH+A KFI ++ REIVVRD+ RFHHFK G+CSC DYW
Sbjct: 840 SPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/646 (25%), Positives = 284/646 (43%), Gaps = 140/646 (21%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
++ PF K +HA ++ G S+F+ L+N YA +S ++ FD++
Sbjct: 130 TKTPF-AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQI----------- 177
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPT 144
P +D +W ++I Y G F AI F +++ ++ P
Sbjct: 178 --------------------PQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 217
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C L D G+K+H + K G V V SL++MY++ G +A+++FD
Sbjct: 218 FYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +++ SW N+MI+G QNG +AL +
Sbjct: 275 DMPFRDMGSW-------------------------------NAMISGLIQNGNAAQALDV 303
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
M + +K + T+ S L C L + IH Y+I+ + V NALI+ YA
Sbjct: 304 LDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA 362
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G +E A+K +Q I+ DVV+W +++
Sbjct: 363 KFGNLEDARKAFQQMFIT---------------------------------DVVSWNSII 389
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-E 443
YEQN A F M G +P+ TL ++ S+ + + + +H +R G
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ + NA++ MY+K G +++A +VF +I + + +SW ++I AQ+GL EAI++++
Sbjct: 450 MEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGYAQNGLASEAIEVYK 508
Query: 504 RMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF-----ASMV 557
M E I P+ T+V +L A H G ++QG + + ++ T H ++
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG------RVIKTNLHLDVFVATCLI 562
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDL-GKIAAEKLLLIE 612
D+ G+ G L +A + +P E V W +++S +H K L L G++ E ++
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIHGHAEKTLKLFGEMLDEG---VK 618
Query: 613 PDNSGAYSALCNLYSSC--------GKW----EDAANIRKSMKYVG 646
PD + +L S+C GKW I+ S+K+ G
Sbjct: 619 PD----HVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG 660
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 49/304 (16%)
Query: 4 PNPPSLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
PN + +S L YAH+ LQ +K +H R+IK LHL VF+ L++ Y K
Sbjct: 518 PNQGTWVSILPAYAHVGALQQGMK---------IHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ A +F ++P ++ +WN I+S + G +
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE------------------------- 603
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+++F EM+ + V P T S+L++C+ G + GK + + G+ +
Sbjct: 604 ------KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK 657
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVV-SLHIHSGRLDLARAQFDQMIE 239
++++ + G MA M L+ + S W ++ + IH G ++L + D++ E
Sbjct: 658 HYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH-GNIELGKFASDRLFE 716
Query: 240 RDV--VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
D V + +++ N +E + ++ ++ LK K ST+ ++ G
Sbjct: 717 VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK--KTPGWSTIEVNRKVDVFYTG 774
Query: 298 KQIH 301
Q H
Sbjct: 775 NQSH 778
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/695 (36%), Positives = 396/695 (56%), Gaps = 75/695 (10%)
Query: 101 VFNLMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
+FN +R D SW ++I G ++R F M + + P + T + SC+AL
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
DL++GK+ H + G + V+++L++MY+K G
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCG------------------------- 131
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS------ 273
+L AR FD++ R++VTW S+I GY QN EAL +F L + S
Sbjct: 132 ------KLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEE 185
Query: 274 --LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
D + S LSAC+ + + + +H I+ D KV GVE
Sbjct: 186 VGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLD--------------KVMGVE- 230
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
TLLD Y K G++ +R++FD + ++DVV+W +M+ Y QNG
Sbjct: 231 ------------------NTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNG 272
Query: 392 LNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
L+ DA E+F M++ G K N TLS +L + +L G +H ++ G +++ ++
Sbjct: 273 LSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMA 332
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
++I MY K G AR F+ + + SWT+MI HG EA+ +F +M+ G+
Sbjct: 333 TSIIDMYCKCGQAEMARNAFDGMK-EKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGV 391
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP++IT++ VL AC+H G +E+G R++N M + + ++P H+ MVDLLGRAG ++EAY
Sbjct: 392 KPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAY 451
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
N I++M + D V WGSLL+ACR+HK+++L +I+A +L ++P N G Y L N+Y+ G
Sbjct: 452 NLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAG 511
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+W+D +R +K G+ K G+S V+++ +VHVF V D HPQ + IY + ++ +++
Sbjct: 512 RWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQ 571
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+VP+ ASVLHDV+E+ KE ++R HSEKLA+AFG++++ +T+ ++KNLRVC DCH+
Sbjct: 572 EAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHT 631
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK I K+V REI+VRDA RFHHFK GLCSC DYW
Sbjct: 632 VIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 239/533 (44%), Gaps = 93/533 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK H + + G +F+ ++L++ Y+K +S A+ +FDE+P + + +W ++++ Y +
Sbjct: 101 GKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQ 160
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
A VF S E+G +++ M SV
Sbjct: 161 NDDAHEALMVFKEFLFEKSEG------NGEEVGTSVDSVAMI----------------SV 198
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C+ + + + + VH +K GL + V N+LL+ YAK G+ +++ VFD M K+V
Sbjct: 199 LSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDV 258
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW NSMIA Y+QNG +A +F MLK
Sbjct: 259 VSW-------------------------------NSMIAVYAQNGLSTDAFEVFHGMLKA 287
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
K ++ TL++ L ACA+ L++G +H +I+ G V N
Sbjct: 288 GGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIK-----MGYVNN-------------- 328
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
VI T+++D Y K G AR FD +++++V +WTAM+ GY +G
Sbjct: 329 --------------VIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHG 374
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSVS 450
++A+++F M+ G KPN T ++L+ S L+ G + +A + +
Sbjct: 375 FAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHY 434
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
++ + +AG I A + + R++ V W S++ A H E A ++ R L +
Sbjct: 435 GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELA-EISAREL-FKL 492
Query: 511 KPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
P + Y +L G + +R ++K+ +KP P + S+V+L GR
Sbjct: 493 DPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKP-PGY--SLVELKGR 542
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 62/279 (22%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + + N V + VH IK GL + ++N+L++ YAK +S ++KVFD+M K
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKD 257
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ SWN++++ YA+ G A EVF+ M YNE+
Sbjct: 258 VVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGK-------YNEV--------------- 295
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
T++++L +C G L G +H V+K G V + S+++MY K G M
Sbjct: 296 --------TLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEM 347
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ FDGM+ KNV S W +MIAGY +G+
Sbjct: 348 ARNAFDGMKEKNVRS-------------------------------WTAMIAGYGMHGFA 376
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
EAL +F M+ + +KP+ T S L+AC++ L+ G
Sbjct: 377 REALDVFYQMIW-AGVKPNYITFISVLAACSHAGFLEEG 414
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/749 (36%), Positives = 432/749 (57%), Gaps = 26/749 (3%)
Query: 43 GLHLSVFLKNSLMNFYAK-TESISYA-KKVFDEMPVKTLC---SWNTILSAYAKQGRLDL 97
G LS + L F + ++S++Y +V +K C N +L+ YAK L+
Sbjct: 280 GFSLSSYFYPPLXYFSSTFSDSMNYPNSEVLHAKLIKNGCVGIRGNHLLNLYAKSQNLEQ 339
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
A ++F +P D SWT +I + IG + + +F +M V P QFT++ VL SC++
Sbjct: 340 AHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSS 399
Query: 158 -LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
+ D GK +H ++++ GL + NS+L+ Y K A+ +F M K+ SWN+
Sbjct: 400 NVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNI 459
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++S ++ G + + F Q+ +D +WN+MI G +NG + AL + M+ +
Sbjct: 460 MMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVA-AGPAF 518
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+K T + L ++L L LGKQIH +++ G V N+LI Y K G +E A I
Sbjct: 519 NKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVI- 577
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+ ++ +++++ D + +S V+W++M+ GY QNG +DA
Sbjct: 578 ------FKHLPQESSMMNSEESCDD-----AVVES------VSWSSMVSGYVQNGRFEDA 620
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++ F M+ + + +TL++++S +S L+ G+Q+H + G + + +++I M
Sbjct: 621 LKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDM 680
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y K G++N A +FN R V WTSMI A HG G EA++LFE M+ GI P+ ++
Sbjct: 681 YVKCGSLNDAWLIFNQAKDRN-VVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVS 739
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+VGVLTAC+H GL+E+G +Y+ +M+ V+ I+P HF MVDL GRAG L E FI N
Sbjct: 740 FVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNN 799
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
+ W S LS+CRVHKN+++G +KLL +EP ++G Y ++ ++ +WE+AA
Sbjct: 800 AISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAA 859
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
IR M+ GVKK SW+Q++N+VH F + D HPQ IY+ + ++ +KE+G+
Sbjct: 860 KIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYST 919
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
D V+ DVE++ ++ +L +HSEKLAIA+G+IST T +R+MKNLRVC DCH+ IK+
Sbjct: 920 DVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYAS 979
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+L+ REI++RD RFHHFK G CSC DYW
Sbjct: 980 ELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/528 (27%), Positives = 252/528 (47%), Gaps = 63/528 (11%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H I++ GL L L NS++++Y K YA+K+F M K SWN ++S+Y
Sbjct: 406 IGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYL 465
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + + ++F +P +D+ SW T+I G + A+ + +MV + T +
Sbjct: 466 QIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSI 525
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L ++L L GK++H+ V+K G+ V NSL++MY K G+ A +F
Sbjct: 526 ALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFK------ 579
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
L S ++ + D ++E V+W+SM++GY QNG +AL F+ M+
Sbjct: 580 --------HLPQESSMMNSEESCDDAVVES--VSWSSMVSGYVQNGRFEDALKTFSFMIC 629
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S ++ DKFTL S +SACA+ L+LG+Q+H YI + +G+ L
Sbjct: 630 -SQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQK--------IGHGL----------- 669
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+V ++++D Y+K G + A IF+ +DR+VV WT+M+ G +
Sbjct: 670 --------------DVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALH 715
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-----HASALRSGEAS 445
G ++AV LF M+ EG PN + +L+ S L+ G + +R G
Sbjct: 716 GQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEH 775
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
++ +Y +AG +N + + + + W S + + H E I + +++
Sbjct: 776 ----FTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKL 831
Query: 506 LELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
LEL +P D Y+ + C E+ + ++M+ +K PS
Sbjct: 832 LEL--EPFDAGPYILFSSICATEHRWEEAAKIRSLMQQ-RGVKKNPSQ 876
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/709 (35%), Positives = 411/709 (57%), Gaps = 12/709 (1%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++++Y+ + A + +P+ S++++I + F +I +F M ++P
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ ++ C L AGK++H +GL V SL +MY + G A+ VFD
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFD 175
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
M K+V + + ++ + G L+ +M IE ++V+WN +++G++++GY E
Sbjct: 176 RMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKE 235
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ MF M PD+ T++S L + + E L +G+QIH Y+I+ V +A++
Sbjct: 236 AVIMFQKM-HHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAML 294
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----D 376
Y K G V K+ ++ + + G + G + A +F +++ +
Sbjct: 295 DMYGKSGHVYGIIKLFDE--FEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELN 352
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+WT+++ G QNG + +A+ELFR M G KPN T+ +ML ++A+L HG+ H
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHG 412
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+R + V +ALI MY+K G I ++ VFN++ + V W S++ + HG +
Sbjct: 413 FAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKN-LVCWNSLMNGYSMHGKAK 471
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
E + +FE ++ +KPD I++ +L+AC GL ++G +Y+NMM + IKP H++ M
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCM 531
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
V+LLGRAG LQEAY+ I+ +P EPD WG+LL++CR+ N+DL +IAA+KL +EP+N
Sbjct: 532 VNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENP 591
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y + N+Y++ G W + +IR M+ +G+KK G SW+Q++NKV+ D HPQ D
Sbjct: 592 GTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQID 651
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I KM +I +E+++ G P+ L DVEE +EQML HSEKLA+ FGL++TP+ T L
Sbjct: 652 QITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPL 711
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++KNLR+C DCH+ IKFI REI +RD RFHHFK G+CSC D+W
Sbjct: 712 QVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 223/464 (48%), Gaps = 43/464 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H GL + F++ SL + Y + + A+KVFD M K + + + +L YA+
Sbjct: 135 GKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYAR 194
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+G L+ + + M + VSW I+ +N G K A+ MF +M P Q T
Sbjct: 195 KGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVT 254
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
V+SVL S +L+ G+++H +V+K GL V +++L+MY K G +FD
Sbjct: 255 VSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFE 314
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQF----DQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+ N ++ +G +D A F +Q +E +VV+W S+IAG +QNG D EAL
Sbjct: 315 MMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALE 374
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M + + +KP++ T+ S L AC N+ L G+ H + +R VG+ALI Y
Sbjct: 375 LFREM-QVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMY 433
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G ++++Q +F+ + +++V W ++
Sbjct: 434 AKCGRIKMSQI---------------------------------VFNMMPTKNLVCWNSL 460
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSG 442
+ GY +G K+ + +F S++R KP+ + +++LS + D G K + + G
Sbjct: 461 MNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYG 520
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
L + ++ + +AG + A + I + ++ W +++
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALL 564
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 36/277 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L S S N +G+ +H +IK GL + +++++ Y K+ + K+FDE +
Sbjct: 258 VLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMME 317
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFV 134
N ++ ++ G +D A E+F L + + VSWT+II + G+ A+ +F
Sbjct: 318 TGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFR 377
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM V P + T+ S+L +C + L G+ H F V+ L V+V ++L++MYAK G
Sbjct: 378 EMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCG 437
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
M++ VF+ M KN +V WNS++ GYS
Sbjct: 438 RIKMSQIVFNMMPTKN-------------------------------LVCWNSLMNGYSM 466
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
+G E + +F ++++ + LKPD + S LSAC +
Sbjct: 467 HGKAKEVMSIFESLMR-TRLKPDFISFTSLLSACGQV 502
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/706 (37%), Positives = 410/706 (58%), Gaps = 69/706 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK G +D A VF LM ++DSVSW ++I ++ F++A++ + M + ++
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P+ F + S L+SC +LG + G++ H +K GL V+V+N+LL +YA+
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAE---------- 251
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EA 261
+ RL + F M+ERD V+WN++I + +G EA
Sbjct: 252 ---------------------TSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEA 290
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F M++ + P++ T + L+ ++L KL QIHA I++ + NAL++
Sbjct: 291 IEVFLEMMR-AGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLA 349
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
CY K G +E ++I + RD V+W
Sbjct: 350 CYGKSGEMENCEEIFSRMS--------------------------------ERRDEVSWN 377
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+M+ GY N L A++L M++ G + + +T + +LS +++A+L+ G ++HA A+R+
Sbjct: 378 SMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRA 437
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S + + +AL+ MYSK G I+ A R FNL+ R SW SMI A+HG G+ A++L
Sbjct: 438 CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRN-LYSWNSMISGYARHGHGDNALRL 496
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F RM G PDHIT+VGVL+AC+H GLV++G Y+ M V+ + P H++ MVDLLG
Sbjct: 497 FTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLG 556
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSAC--RVHKNLDLGKIAAEKLLLIEPDNSGAY 619
RAG L + NFI MP++P+++ W ++L AC + +LG+ AAE L ++P N+ Y
Sbjct: 557 RAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNY 616
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S GKWED A R++M+ VKK G SWV +++ VHVF D HP++ IY
Sbjct: 617 VLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIY 676
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
K+ ++ +I++ G+VP L+D+E + KE++L +HSEKLA+AF +++ +RIM
Sbjct: 677 AKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIM 735
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCHSA K+I K+VDR IV+RD+ RFHHF+ G CSCRDYW
Sbjct: 736 KNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/569 (26%), Positives = 253/569 (44%), Gaps = 101/569 (17%)
Query: 34 LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
L H ++K G +FL N+L+N Y + A+K+FDEMP + +W ++S Y + G
Sbjct: 21 LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+ AC V EM+ + LP +F S +
Sbjct: 81 MPEDACGVLK-------------------------------EMIFEGFLPNRFAFGSAIR 109
Query: 154 SCT-ALGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+C ++ G++VH + ++TGL+ V V N L+NMYAK GD A++VF G+
Sbjct: 110 ACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVF-GL----- 163
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
M+++D V+WNSMI G QN +A+ + N ++
Sbjct: 164 -------------------------MVDKDSVSWNSMITGLDQNKCFEDAVKSY-NSMRK 197
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ L P F L S LS+CA+L + LG+Q H I+ D V N L++ YA+ +
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
QK +F + +RD V+W ++ +G
Sbjct: 258 CQK---------------------------------VFSWMLERDQVSWNTVIGALADSG 284
Query: 392 LN-KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ +A+E+F M+R G PN T +L+ SSL++ QIHA L+ ++
Sbjct: 285 ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIE 344
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+ Y K+G + +F+ + R++ VSW SMI + L +A+ L M++ G
Sbjct: 345 NALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQ 404
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+ D T+ VL+AC +E G + ++ +++VD+ + G + A
Sbjct: 405 RLDCFTFATVLSACATVATLECGMEVHACAIRAC-LESDVVIGSALVDMYSKCGRIDYAS 463
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLD 599
F MP+ ++ +W S++S H + D
Sbjct: 464 RFFNLMPVR-NLYSWNSMISGYARHGHGD 491
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 121/534 (22%), Positives = 217/534 (40%), Gaps = 102/534 (19%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G+ H IK GL + V + N+L+ YA+T ++ +KVF M + SWNT++ A
Sbjct: 221 LLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGAL 280
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A G SVS AI +F+EM++ P + T
Sbjct: 281 ADSGA---------------SVS---------------EAIEVFLEMMRAGWSPNRVTFI 310
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RL 208
++LA+ ++L ++H+ ++K + + N+LL Y K G+ + +F M
Sbjct: 311 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER 370
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++ SWN ++S +IH+ L A M++R
Sbjct: 371 RDEVSWNSMISGYIHNELLCKAMDLVWLMMQR---------------------------- 402
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ D FT A+ LSACA + L+ G ++HA IR ++ +G+AL+ Y+K G
Sbjct: 403 ----GQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGR 458
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ A R F+ + R++ +W +M+ GY
Sbjct: 459 IDYAS---------------------------------RFFNLMPVRNLYSWNSMISGYA 485
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSL 447
++G +A+ LF M G P++ T +LS S + +D G + S G +
Sbjct: 486 RHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRV 545
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ ++ + +AG ++ N + + + W +++ A + G G + +L R E
Sbjct: 546 EHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCR-GNGRKT-ELGRRAAE 603
Query: 508 LGIKPD---HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ D + YV + GG E R M+ K + +M D
Sbjct: 604 MLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKD 657
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 265/712 (37%), Positives = 401/712 (56%), Gaps = 76/712 (10%)
Query: 82 WNTILSA-----YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
WN ++A Y++ G +A +F+ MP RD SW +I + G A+ + EM
Sbjct: 248 WNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM 307
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ + TV S+L C LGD+S +H +V+K GL + V+N+L+NMYAK G+
Sbjct: 308 RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN- 366
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
L+ AR F QM DVV+WNS+IA Y QN
Sbjct: 367 ------------------------------LEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV- 315
A G F M + + +PD TL S S A K + +H +I+R + V
Sbjct: 397 DPVTAHGFFVKM-QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVI 455
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNA++ YAK+G LLD A ++F+ + +
Sbjct: 456 GNAVVDMYAKLG------------------------LLDS---------AHKVFEIILVK 482
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK--PNNYTLSAMLSVSSSLASLDHGKQ 433
DV++W ++ GY QNGL +A+E+++ M+ E + PN T ++L + + +L G +
Sbjct: 483 DVISWNTLITGYAQNGLASEAIEVYK-MMEECKEIIPNQGTWVSILPAYAHVGALQQGMR 541
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IH +++ + V+ LI +Y K G + A +F + ++ +V+W ++I HG
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHG 600
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
E+ ++LF ML+ G+KPDH+T+V +L+AC+H G VE+G+ + +M+ + IKP+ H+
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHY 659
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
MVDLLGRAG L+ AY FI++MPL+PD WG+LL ACR+H N++LGK A+++L ++
Sbjct: 660 GCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDS 719
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
N G Y L N+Y++ GKWE +R + G+KKT G+S +++ KV VF + HP
Sbjct: 720 KNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHP 779
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ IY ++ + ++K +G++PD + VL DVEED KE +L HSE+LAIAFG+ISTP
Sbjct: 780 KCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPK 839
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +RI KNLRVC DCH+A KFI ++ REIVVRD+ RFHHFK G+CSC DYW
Sbjct: 840 SPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/646 (25%), Positives = 284/646 (43%), Gaps = 140/646 (21%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
++ PF K +HA ++ G S+F+ L+N YA +S ++ FD++
Sbjct: 130 TKTPF-AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQI----------- 177
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPT 144
P +D +W ++I Y G F AI F +++ ++ P
Sbjct: 178 --------------------PQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 217
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C L D G+++H + K G V V SL++MY++ G +A+++FD
Sbjct: 218 FYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +++ SW N+MI+G QNG +AL +
Sbjct: 275 DMPFRDMGSW-------------------------------NAMISGLIQNGNAAQALDV 303
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
M + +K + T+ S L C L + IH Y+I+ + V NALI+ YA
Sbjct: 304 LDEM-RLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA 362
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G +E A+K +Q I+ DVV+W +++
Sbjct: 363 KFGNLEDARKAFQQMFIT---------------------------------DVVSWNSII 389
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-E 443
YEQN A F M G +P+ TL ++ S+ + + + +H +R G
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ + NA++ MY+K G +++A +VF +I ++ +SW ++I AQ+GL EAI++++
Sbjct: 450 MEDVVIGNAVVDMYAKLGLLDSAHKVFEII-LVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 504 RMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF-----ASMV 557
M E I P+ T+V +L A H G ++QG R + ++ T H ++
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHG------RVIKTNLHLDVFVATCLI 562
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDL-GKIAAEKLLLIE 612
D+ G+ G L +A + +P E V W +++S +H K L L G++ E ++
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIHGHAEKTLKLFGEMLDEG---VK 618
Query: 613 PDNSGAYSALCNLYSSC--------GKW----EDAANIRKSMKYVG 646
PD + +L S+C GKW I+ S+K+ G
Sbjct: 619 PD----HVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYG 660
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 129/304 (42%), Gaps = 49/304 (16%)
Query: 4 PNPPSLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
PN + +S L YAH+ LQ ++ +H R+IK LHL VF+ L++ Y K
Sbjct: 518 PNQGTWVSILPAYAHVGALQQGMR---------IHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ A +F ++P ++ +WN I+S + G +
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE------------------------- 603
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+++F EM+ + V P T S+L++C+ G + GK + + G+ +
Sbjct: 604 ------KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK 657
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVV-SLHIHSGRLDLARAQFDQMIE 239
++++ + G MA M L+ + S W ++ + IH G ++L + D++ E
Sbjct: 658 HYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIH-GNIELGKFASDRLFE 716
Query: 240 RDV--VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
D V + +++ N +E + ++ ++ LK K ST+ ++ G
Sbjct: 717 VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK--KTPGWSTIEVNRKVDVFYTG 774
Query: 298 KQIH 301
Q H
Sbjct: 775 NQSH 778
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/662 (36%), Positives = 398/662 (60%), Gaps = 39/662 (5%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G K A F + + P+ F+ +L SC + LS GK++HS ++ +G S ++
Sbjct: 35 GHLKQAFDRFSSHIWSE--PSLFS--HLLQSCISENSLSLGKQLHSLIITSGCSSDKFIS 90
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N LLN+Y+K G A +F M KN+ S N++++ + SG AR FD+M ER+V
Sbjct: 91 NHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVA 150
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TWN+M+AG Q ++ E LG+F+ M + PD+F L S L CA L L G+Q+H Y
Sbjct: 151 TWNAMVAGLIQFEFNEEGLGLFSRM-NELGFLPDEFALGSVLRGCAGLRALVAGRQVHGY 209
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ + F+ N++ ++L Y+K G +G
Sbjct: 210 VRKCGFE---------------------------------FNLVVVSSLAHMYMKCGSLG 236
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
R+ ++ ++VVAW ++ G QNG ++ ++ + M G +P+ T +++S S
Sbjct: 237 EGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCS 296
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
LA+L G+QIHA +++G + +SV ++LI+MYS+ G + + +VF L + V W+
Sbjct: 297 ELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVF-LECENGDVVCWS 355
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI A HG G EAI LF +M + ++ + +T++ +L AC+H GL E+G +++++M
Sbjct: 356 SMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEK 415
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+ +KP H+ MVDLLGR G ++EA I +MP++ DV+ W +LLSAC++HK ++ +
Sbjct: 416 YGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARR 475
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
+E++ ++P + Y L N+++S +W+D +++RK+M+ +KK G SW++++N++H
Sbjct: 476 ISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIH 535
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAI 723
F + D HP+ I + + ++ E+K+ G+VPD SVLHD++ + KE L HHSEKLAI
Sbjct: 536 QFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAI 595
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
AF L+ TP T +R++KNLRVC+DCH AIK+I ++ +REI+VRD++RFHHFK G CSC D
Sbjct: 596 AFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGD 655
Query: 784 YW 785
YW
Sbjct: 656 YW 657
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 226/505 (44%), Gaps = 67/505 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
++HLLQS + + +GK +H+ II G F+ N L+N Y+K + A +F M
Sbjct: 54 LFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVM 113
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P K + S N +++ Y + G A ++F+ MP R+ +W ++ + + + +F
Sbjct: 114 PRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFS 173
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M + LP +F + SVL C L L AG++VH +V K G + V +SL +MY K G
Sbjct: 174 RMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCG 233
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ + M +NV +W N++IAG +Q
Sbjct: 234 SLGEGERLIRAMPSQNVVAW-------------------------------NTLIAGRAQ 262
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NGY E L + NM+K + +PDK T S +S+C+ L L G+QIHA +I+
Sbjct: 263 NGYPEEVLDQY-NMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVS 321
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V ++LIS Y++ G +E + K +F +
Sbjct: 322 VISSLISMYSRCGCLEYSLK---------------------------------VFLECEN 348
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQ 433
DVV W++M+ Y +G +A++LF M +E + N+ T ++L S + G K
Sbjct: 349 GDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKF 408
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ G L ++ + + G++ A + + + + ++W +++ A H
Sbjct: 409 FDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHK 468
Query: 494 LGEEAIQLFERMLELGIKPDHITYV 518
E A ++ E + L + D + YV
Sbjct: 469 KTEMARRISEEVFRLDPR-DPVPYV 492
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/738 (36%), Positives = 425/738 (57%), Gaps = 57/738 (7%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
S ++ Y + I A+KVFD P+ +T+ SWN ++SAY + + A +F+ MP R+
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
+VS+ +I Y + G +A ++F V+P + V+
Sbjct: 83 TVSFNGMISGYVKNGMVADARKVF------DVMPERNVVS-------------------- 116
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
S++ Y + G A+ +F M +NV SW V++ + R+D
Sbjct: 117 -------------WTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDD 163
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
A+ FD + E+DVV +MI GY Q G EA +F D + FT + +S A
Sbjct: 164 AKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELF-----DEMKVRNVFTWTTMVSGYA 218
Query: 290 NLEKLKLGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
++ + +++ + R E T A++ Y + G ++ A ++ E + + ++A
Sbjct: 219 KNGRVDVARKLFEVMPERNEVSWT-----AMLMGYTQSGRMKEAFELFEAMPVKW--IVA 271
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
++ + G++ AR +F+ +++RD W AM+ +E+ GL+ +A+ LF M REG
Sbjct: 272 CNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGV 331
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
N ++ ++LSV +SLASLDHG+Q+HA +RS L V++ LITMY K G++ A+
Sbjct: 332 ALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKG 391
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+FN ++ + V W SMI +QHGLGEEA+ +F M G++PD +T++GVL+AC++ G
Sbjct: 392 IFNRFLFK-DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSG 450
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
V++G + MK ++++P H+A MVDLLGRAG + EA +E MP+EPD + WG+L
Sbjct: 451 KVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGAL 510
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L ACR H LDL ++A EKL +EP N+G Y L ++Y++ G+W D +RK + V
Sbjct: 511 LGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINR-RVI 569
Query: 649 KTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
K G SW++++ KVH+F G + HP++ I + K+ ++E G+ PD + VLHDV+E
Sbjct: 570 KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDE 629
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
+ K L +HSE+LA+A+GL+ PE +R+MKNLRVC DCHSAIK I K+ REI++RD
Sbjct: 630 EEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRD 689
Query: 768 ATRFHHFKKGLCSCRDYW 785
A RFHHFK G CSC+D+W
Sbjct: 690 ANRFHHFKDGSCSCKDFW 707
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 205/463 (44%), Gaps = 110/463 (23%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
V + +++ Y + + A+++FDEM V+ + +W T++S YAK GR+D+A ++F +MP
Sbjct: 176 VVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPE 235
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
R+ VSWT +++ Y + GR K A +F + +P ++ V
Sbjct: 236 RNEVSWTAMLMGYTQSGRMKEAFELF------EAMPVKWIVA------------------ 271
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
N ++ + G+ A+ +F+GM+ ++ +W
Sbjct: 272 ---------------CNEMILQFGLAGEMHRARMMFEGMKERDEGTW------------- 303
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
N+MI + + G D EALG+FA M ++ + + ++ S LS
Sbjct: 304 ------------------NAMIKVFERKGLDLEALGLFARMQRE-GVALNFPSMISVLSV 344
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
CA+L L G+Q+HA ++R+EFD V + LI+
Sbjct: 345 CASLASLDHGRQVHARLVRSEFDQDLYVASVLITM------------------------- 379
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
Y+K GD+ A+ IF+ +DVV W +M+ GY Q+GL ++A+ +F M G
Sbjct: 380 --------YVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSG 431
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINA 465
+P+ T +LS S + G +I A++ + + ++ + +AG ++
Sbjct: 432 VQPDEVTFIGVLSACSYSGKVKEGFEIF-EAMKCTYQVEPGIEHYACMVDLLGRAGRVDE 490
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERM 505
A + + + + W +++ A H L E A++ ++
Sbjct: 491 AMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKL 533
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 152/341 (44%), Gaps = 65/341 (19%)
Query: 31 VGKLVHARIIKCGLHL-SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
VG+L AR + + + +VF ++++ YAK + A+K+F+ MP + SW +L Y
Sbjct: 189 VGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGY 248
Query: 90 AKQGRLDLACEVFNLMP-------------------------------NRDSVSWTTIIV 118
+ GR+ A E+F MP RD +W +I
Sbjct: 249 TQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIK 308
Query: 119 TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG 178
+ G A+ +F M ++ V ++ SVL+ C +L L G++VH+ +V++
Sbjct: 309 VFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQ 368
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
+ V + L+ MY K GD + AK +F+ K+
Sbjct: 369 DLYVASVLITMYVKCGDLVRAKGIFNRFLFKD---------------------------- 400
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
VV WNSMI GYSQ+G EAL +F +M S ++PD+ T LSAC+ K+K G
Sbjct: 401 ---VVMWNSMITGYSQHGLGEEALNVFHDMC-SSGVQPDEVTFIGVLSACSYSGKVKEGF 456
Query: 299 QIHAYIIRTEFDATGPVGNA-LISCYAKVGGVEIAQKIVEQ 338
+I + T G A ++ + G V+ A ++VE+
Sbjct: 457 EIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEK 497
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 29/231 (12%)
Query: 435 HASALRSG--EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQ 491
+A+ LR +A SL + + I+ Y + G+I+ AR+VF+ Q T+ SW +M+ A +
Sbjct: 5 YAATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFE 64
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
+A+ LF++M + + +++ G+++ G+V ++ +++M + + T
Sbjct: 65 SHKPRDALLLFDQMPQ----RNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWT-- 118
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW----GSLLSACRVHKNLDLGKIAAEK 607
SMV + G+++EA MP +VV+W G LL R+ L + EK
Sbjct: 119 ---SMVRGYVQEGMVEEAEKLFWEMP-RRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEK 174
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+++ + G Y C + G+ ++A + MK V F+W +
Sbjct: 175 DVVVVTNMIGGY---CQV----GRLDEARELFDEMKVRNV-----FTWTTM 213
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/770 (34%), Positives = 416/770 (54%), Gaps = 101/770 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y + LD A +VF MP RD VSW ++I YN G + A+ ++ V+
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +T++SVL +C LG + G +H + K G+ V V N LL+MY K +
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF------NGL 326
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
DG R+ FD+M+ RD V+WN+MI GYSQ G E++
Sbjct: 327 IDGRRI-------------------------FDKMVLRDAVSWNTMICGYSQVGLYEESI 361
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN----- 317
+F M+ + KPD T+ S L AC +L L+ GK +H Y+I + ++ N
Sbjct: 362 KLFMEMV--NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINM 419
Query: 318 --------------------------ALISCYAKVGGVEIAQKI-------VEQSGISYL 344
++I+ Y + G + A K+ V+ ++Y+
Sbjct: 420 YAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYV 479
Query: 345 -----------------------------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N++ TL+D Y K G++G + ++F++++ R
Sbjct: 480 MLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR 539
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D++ W ++ + + + M EG P+ T+ ++L V S LA+ GK+IH
Sbjct: 540 DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH 599
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ G S + V N LI MYSK G++ + +VF L+ ++ V+WT++I A +G G
Sbjct: 600 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGEG 658
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
++A++ F M GI PDH+ +V ++ AC+H GLVE+G Y++ MK +KI+P H+A
Sbjct: 659 KKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC 718
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VDLL R+ LL +A +FI +MPL+PD WG+LLSACR+ + ++ + +E+++ + PD+
Sbjct: 719 VVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDD 778
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+G Y + N+Y++ GKW+ +IRKS+K G+KK G SW++IQNKV+VFG Q
Sbjct: 779 TGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQF 838
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ + + + + + G++ + VLHD++ED K +L HSE+LAIAFGL++T T
Sbjct: 839 EEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTP 898
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L++MKNLRVC DCH+ K+I K+ RE++VRDA RFH FK G CSC DYW
Sbjct: 899 LQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 169/601 (28%), Positives = 281/601 (46%), Gaps = 110/601 (18%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD-EMPVKTLCSWNTILSAYAKQG 93
+H+ II GLH SV L+ YA + + VF P + WN+I+ A
Sbjct: 94 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRA----- 148
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+T+N G F A+ ++ E + ++ P +T SV+
Sbjct: 149 ------------------------LTHN--GLFSEALSLYSETQRIRLQPDTYTFPSVIN 182
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+C L D K +H V+ G + + N+L++MY + D A+ VF+ M L++V S
Sbjct: 183 ACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS 242
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
WNS+I+GY+ NGY EAL ++ ++
Sbjct: 243 -------------------------------WNSLISGYNANGYWNEALEIYYR-FRNLG 270
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+ PD +T++S L AC L ++ G IH I + V N L+S Y K
Sbjct: 271 VVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK-------- 322
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
F L+DG RRIFD + RD V+W M+ GY Q GL
Sbjct: 323 ---------------FNGLIDG----------RRIFDKMVLRDAVSWNTMICGYSQVGLY 357
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+++++LF MV + KP+ T++++L L L+ GK +H + SG + SN L
Sbjct: 358 EESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 416
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K GN+ A++ VF+ + + ++VSW SMI Q+G +EA++LF +M++ +KPD
Sbjct: 417 INMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPD 474
Query: 514 HITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+TYV +L+ T G + G+ + ++ K S+ ++VD+ + G + ++
Sbjct: 475 SVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSN--TLVDMYAKCGEMGDSLKV 532
Query: 573 IENMPLEPDVVAWGSLLSACRVHK---NLDLGKIAAEKLLLIEPDNSGAYSAL--CNLYS 627
ENM D++ W +++++C VH NL L I+ + + PD + S L C+L +
Sbjct: 533 FENMKAR-DIITWNTIIASC-VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLA 590
Query: 628 S 628
+
Sbjct: 591 A 591
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 42/342 (12%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
M+T P ++ Y LL + + + +GK +H + K G + ++ + N+L++ YAK
Sbjct: 467 MKTDVKPDSVT----YVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAK 522
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ + KVF+ M + + +WNTI+++ +L
Sbjct: 523 CGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL----------------------- 559
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+RM M + V P T+ S+L C+ L GK++H + K GL V
Sbjct: 560 --------GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 611
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM--- 237
V N L+ MY+K G + VF M+ K+V +W ++S G A F +M
Sbjct: 612 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 671
Query: 238 -IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
I D V + ++I S +G E L F M KD ++P A + L + L
Sbjct: 672 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL---LSRSAL 728
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+ +I+ + AL+S G EIAQ++ E+
Sbjct: 729 LDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSER 770
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 420 SVSSSLASLDHGKQIH---ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
S+S +LAS Q+H + + G S+ S LI Y+ + ++ VF L
Sbjct: 77 SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 136
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
W S+I AL +GL EA+ L+ + ++PD T+ V+ AC GL++
Sbjct: 137 NNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLD----- 189
Query: 537 YNMMKNVHKIKPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ M K++H + F S ++D+ R L +A E MPL DVV+W SL+
Sbjct: 190 FEMAKSIHD-RVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLI 247
Query: 590 SA 591
S
Sbjct: 248 SG 249
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 294/798 (36%), Positives = 435/798 (54%), Gaps = 106/798 (13%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
P P F A SN + +G +H +I+ G +VF+ N++++ Y K +++
Sbjct: 124 PDHYTFPFVFKACGEISNFE-----LGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVV 178
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+A+KVFDE+ + +C DSV+W +I+ Y+
Sbjct: 179 HARKVFDELCYRGIC----------------------------DSVTWNSIVSVYSHCFV 210
Query: 126 FKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
A+ +F EM V +LP V ++L C LG G++VH F V++GL V V N
Sbjct: 211 PNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGN 270
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IER 240
+L++MYAK G A VF+ MR K+V +WN +V+ + +GR + A + F +M IE
Sbjct: 271 ALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIES 330
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
DVVTW+S+I+GY+Q G+ EA+ +F M +P+ TL S LSACA++ L GK+
Sbjct: 331 DVVTWSSVISGYAQRGFGCEAMDVFRQMC-GCRCRPNVVTLMSLLSACASVGALLHGKET 389
Query: 301 HAY----IIRTEF-DATGPVG--NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
H Y I++ E D T + NALI YAK +E+A
Sbjct: 390 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA--------------------- 428
Query: 354 DGYIKIGDIGPARRIFDSL--RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR--EGPK 409
R +FD + +DRDVV WT M+ GY Q+G A++LF M +
Sbjct: 429 ------------RAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIV 476
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS--LSVSNALITMYSKAGNINAAR 467
PN++T+S +L + LA+L GKQIHA LR S L V+N LI MYSK+G+++ A+
Sbjct: 477 PNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQ 536
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
VF+ + ++ VSWTS++ HG E+A ++F+ M + + D IT++ VL AC+H
Sbjct: 537 VVFDSMS-KRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHS 595
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G+ + G + P H+A MVDLLGRAG L EA I +MP+EP V W +
Sbjct: 596 GM-DFG------------VDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIA 642
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LLSACR+H N +L + AA+KLL ++ DN G Y+ L N+Y++ +W+D A I MK G+
Sbjct: 643 LLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGI 702
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
KK G+SWV+ + + F V D H Q IY +A + IK LHDV++
Sbjct: 703 KKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK-------ANFSLHDVDD 755
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
+ K L HSEKLA+A+ +++ P +RI KNLR+C D HSAI +I +V+ EI++RD
Sbjct: 756 EEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRD 815
Query: 768 ATRFHHFKKGLCSCRDYW 785
++RFH FK G CSC+ YW
Sbjct: 816 SSRFHQFKNGSCSCKGYW 833
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 246/512 (48%), Gaps = 53/512 (10%)
Query: 103 NLMPNRDSVSWTTIIVTYN-EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL 161
N+ P+ SV W ++ + A+R+F M P +T V +C + +
Sbjct: 83 NVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNF 142
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS---SWNVVV 218
G +H V++ G V V N++++MY K + A+ VFD + + + +WN +V
Sbjct: 143 ELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIV 202
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
S++ H ++A + F + M GY + PD
Sbjct: 203 SVYSHCFVPNVAVSLFRE-----------MTVGY--------------------GILPDT 231
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+ + L C L G+Q+H + +R+ VGNAL+ YAK G +E A K+ E+
Sbjct: 232 VGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFER 291
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNK 394
+ + +V+ + ++ GY + G A +F +R+ DVV W++++ GY Q G
Sbjct: 292 --MRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGC 349
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-------SGEASSL 447
+A+++FR M +PN TL ++LS +S+ +L HGK+ H +++ + + L
Sbjct: 350 EAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDL 409
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQLFERML 506
+V NALI MY+K ++ AR +F+ I + ++ V+WT MI AQHG A+QLF M
Sbjct: 410 AVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMF 469
Query: 507 ELG--IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS-MVDLLGRA 563
++ I P+ T VL AC ++ G++ + + +I A+ ++D+ ++
Sbjct: 470 KIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKS 529
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
G + A ++M + + V+W SLL+ +H
Sbjct: 530 GDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMH 560
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
A+ LFR M P++YT + +++ + G IH +R G S++ V NA+I+
Sbjct: 110 ALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVIS 169
Query: 456 MYSKAGNINAARRVFNLIHWRQ--ETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKP 512
MY K + AR+VF+ + +R ++V+W S++ + + A+ LF M + GI P
Sbjct: 170 MYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILP 229
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D + V +L C + GL G++ + ++ A +VD+ + G +++A
Sbjct: 230 DTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA-LVDMYAKCGKMEDANKV 288
Query: 573 IENMPLEPDVVAWGSLLSAC----RVHKNLDL-GKIAAEKLLLIEPDNSGAYSALCNLYS 627
E M + DVV W ++++ R L L GK+ EK IE D +S++ + Y+
Sbjct: 289 FERMRFK-DVVTWNAMVTGYSQNGRFEDALSLFGKMREEK---IESDVV-TWSSVISGYA 343
Query: 628 SCGKWEDAANIRKSM 642
G +A ++ + M
Sbjct: 344 QRGFGCEAMDVFRQM 358
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/606 (40%), Positives = 371/606 (61%), Gaps = 20/606 (3%)
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N +L Y + G A+ +F+ +V SWN ++S ++ G++ AR FD+M RDVV
Sbjct: 41 NGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVV 100
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+WN M++GY++ G EA +F D++ D FT + +S A L+ +++
Sbjct: 101 SWNIMVSGYARRGDMVEARRLF-----DAAPVRDVFTWTAVVSGYAQNGMLEEARRV--- 152
Query: 304 IIRTEFDATGPVG----NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
FDA NA+++ Y + ++ A+++ + NV ++ T+L GY +
Sbjct: 153 -----FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNM--MPCRNVASWNTMLTGYAQA 205
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
G + A+ +FD++ +D V+W AML Y Q G +++ ++LF M R G N + +L
Sbjct: 206 GMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVL 265
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S + +A+L+ G Q+H +R+G V NAL+ MY K GN+ AR F + R +
Sbjct: 266 STCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEER-DV 324
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSW +MI A+HG G+EA+++F+ M KPD IT VGVL AC+H GLVE+G Y+
Sbjct: 325 VSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYS 384
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M + + P H+ M+DLLGRAG L EA++ +++MP EPD WG+LL A R+H+N +
Sbjct: 385 MHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPE 444
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ AAEK+ +EP+N+G Y L N+Y+S GKW DA +R M+ GVKK GFSW+++Q
Sbjct: 445 LGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQ 504
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
NKVH F D +HP+++ IY + + +K+ G+V T VLHDVEE+ KE ML++HSE
Sbjct: 505 NKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSE 564
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLA+A+G+++ P +R++KNLRVC DCH+A K+I + R I++RD+ RFHHF+ G C
Sbjct: 565 KLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSC 624
Query: 780 SCRDYW 785
SC DYW
Sbjct: 625 SCGDYW 630
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 189/405 (46%), Gaps = 57/405 (14%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLD--------------- 96
N +++ +A +S A+ FD P K SWN +L+AY + GR++
Sbjct: 10 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 69
Query: 97 ----------------LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
A E+F+ MP RD VSW ++ Y G A R+F
Sbjct: 70 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF------D 123
Query: 141 VLPTQ--FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
P + FT T+V++ G L ++V + + N + + A + MM
Sbjct: 124 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER------NAVSWNAMVAAYIQRRMM 177
Query: 199 --AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
AK +F+ M +NV+SWN +++ + +G L+ A+A FD M ++D V+W +M+A YSQ G
Sbjct: 178 DEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGG 237
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
E L +F M + ++ A LS CA++ L+ G Q+H +IR + VG
Sbjct: 238 CSEETLQLFIEMGRCGEW-VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVG 296
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR- 375
NAL++ Y K G +E A+ E+ + +V+++ T++ GY + G A IFD +R
Sbjct: 297 NALLAMYFKCGNMEDARNAFEE--MEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTS 354
Query: 376 ---DVVAWTAMLVGYEQNGLNKDAVELFRSMVRE---GPKPNNYT 414
D + +L +GL + + F SM + KP +YT
Sbjct: 355 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT 399
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 66/292 (22%)
Query: 32 GKLVHAR-IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G +V AR + VF ++++ YA+ + A++VFD MP + SWN +++AY
Sbjct: 113 GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYI 172
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA--------------------- 129
++ +D A E+FN+MP R+ SW T++ Y + G + A
Sbjct: 173 QRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 232
Query: 130 ----------IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS-G 178
+++F+EM + + VL++C + L G ++H +++ G G
Sbjct: 233 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 292
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
C V N+LL MY K G+ A+ F+ M ++V SW
Sbjct: 293 CF-VGNALLAMYFKCGNMEDARNAFEEMEERDVVSW------------------------ 327
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
N+MIAGY+++G+ EAL +F +M++ +S KPD TL L+AC++
Sbjct: 328 -------NTMIAGYARHGFGKEALEIF-DMMRTTSTKPDDITLVGVLAACSH 371
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H R+I+ G + F+ N+L+ Y K ++ A+ F+EM + + SWNT+++ YA+
Sbjct: 277 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 336
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G A E+F++M D ++ ++ + G + I F M D F
Sbjct: 337 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD------FG 390
Query: 148 VTSVLASCTALGDL 161
VT+ T + DL
Sbjct: 391 VTAKPEHYTCMIDL 404
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/561 (42%), Positives = 354/561 (63%), Gaps = 37/561 (6%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
L AR FD+M ER+VV+W +MI+GYSQ G+ EAL +F ML+ S +P++FT A+ LS
Sbjct: 61 LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLR-SDTEPNEFTFATVLS 119
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
+C +LG+QIH++I + ++ VG
Sbjct: 120 SCTGFSGFELGRQIHSHIFKRNYENHIFVG------------------------------ 149
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
++LLD Y K G I AR +F+ L +RDVV+ TA++ GY Q GL+++A+ELF + RE
Sbjct: 150 ---SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQRE 206
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G N T +++L+ S LA+LDHGKQ+H+ LR + + N+LI MYSK GN+N A
Sbjct: 207 GMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYA 266
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACT 525
R++FN + R +SW +M+V ++HG G E ++LF+ M E +KPD +T++ VL+ C+
Sbjct: 267 RKIFNNMPVRT-VISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCS 325
Query: 526 HGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
HGGL ++G ++ MM +I+ H+ ++DLLGRAG ++EA+ I+ MP EP
Sbjct: 326 HGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAI 385
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
WGSLL ACRVH N ++G+ +LL IEP+N+G Y L NLY+S G+WED N+R+ M
Sbjct: 386 WGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMME 445
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
V K G SW+++ +H F D HP+R+ ++ K+ ++ + KE G+VPD + VL+D
Sbjct: 446 KAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYD 505
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
V+E+ KE++L HSEKLA+AFGLIST E LR++KNLR+C DCH+ KF+ K+ R++
Sbjct: 506 VDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVS 565
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
+RD RFHH G+CSC DYW
Sbjct: 566 IRDKNRFHHVAGGICSCGDYW 586
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 209/480 (43%), Gaps = 99/480 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL + R G+ VHA +IK V+L L+ Y K E + A+ VFDEM
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
R+ VSWT +I Y++ G A+ +FV+
Sbjct: 73 -------------------------------ERNVVSWTAMISGYSQRGFASEALHLFVQ 101
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ P +FT +VL+SCT G+++HS + K + V +SLL+MYAK G
Sbjct: 102 MLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAG- 160
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
IH R F+ + ERDVV+ ++I+GY+Q
Sbjct: 161 -------------------------RIHEAR-----GVFECLPERDVVSCTAIISGYAQL 190
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL +F + ++ + + T AS L+A + L L GKQ+H++++R E +
Sbjct: 191 GLDEEALELFCRLQRE-GMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVL 249
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI Y+K G + A+K IF+++ R
Sbjct: 250 QNSLIDMYSKCGNLNYARK---------------------------------IFNNMPVR 276
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
V++W AMLVGY ++G + V+LF+ M E KP++ T A+LS S D G ++
Sbjct: 277 TVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEM 336
Query: 435 HASALRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ G+ + + +I + +AG + A + + + W S++ A H
Sbjct: 337 FDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 167/325 (51%), Gaps = 46/325 (14%)
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ +K D + + L+ C N ++ G+++HA++I+T CY
Sbjct: 3 IQGPEIKFDGYNM--LLNECVNKRAVREGQRVHAHMIKT--------------CYLP--- 43
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
V T L+ Y K +G AR +FD +R+R+VV+WTAM+ GY
Sbjct: 44 ----------------PVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYS 87
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q G +A+ LF M+R +PN +T + +LS + + + G+QIH+ + + +
Sbjct: 88 QRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIF 147
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V ++L+ MY+KAG I+ AR VF + R + VS T++I AQ GL EEA++LF R+
Sbjct: 148 VGSSLLDMYAKAGRIHEARGVFECLPER-DVVSCTAIISGYAQLGLDEEALELFCRLQRE 206
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA----SMVDLLGRAG 564
G+ +++TY +LTA + ++ G++ ++ H ++ + S++D+ + G
Sbjct: 207 GMSSNYVTYASLLTALSGLAALDHGKQVHS-----HVLRCELPFYVVLQNSLIDMYSKCG 261
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLL 589
L A NMP+ V++W ++L
Sbjct: 262 NLNYARKIFNNMPVRT-VISWNAML 285
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 45/279 (16%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M +GP+ + +L+ + ++ G+++HA +++ + +S LI +Y+K
Sbjct: 1 MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ AR VF+ + R VSWT+MI +Q G EA+ LF +ML +P+ T+ VL+
Sbjct: 61 LGCARHVFDEMRERN-VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLS 119
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF---ASMVDLLGRAGLLQEAYNFIENMPLE 579
+CT E G++ ++ + + +H +S++D+ +AG + EA E +P E
Sbjct: 120 SCTGFSGFELGRQIHSHIFK----RNYENHIFVGSSLLDMYAKAGRIHEARGVFECLP-E 174
Query: 580 PDVVAWGSLLSA--------------CRVHKN---------------------LDLGKIA 604
DVV+ +++S CR+ + LD GK
Sbjct: 175 RDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQV 234
Query: 605 AEKLLLIE-PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+L E P ++L ++YS CG A I +M
Sbjct: 235 HSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNM 273
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH+ +++C L V L+NSL++ Y+K +++YA+K+F+ MPV+T+ SWN +L Y+K
Sbjct: 231 GKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSK 290
Query: 92 QGRLDLACEVFNLMPNR-----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ--DQVLPT 144
G+ ++F LM DSV++ ++ + G + MF EM+ D++
Sbjct: 291 HGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEI--- 347
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ + LG ++ + K + SLL + + + F
Sbjct: 348 EAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGE--FV 405
Query: 205 GMRL-----KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
G RL +N ++ ++ +L+ +GR + R + M+E+ V+
Sbjct: 406 GCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVI 449
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/706 (36%), Positives = 406/706 (57%), Gaps = 39/706 (5%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQVL 142
++L + ++ R A VF+ P R + WT I GR+ + +R F EM+ + +
Sbjct: 50 SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P F + +V+ C +GD+ +GK+VH ++++ G+ V + N++L+MYAK G A+ V
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRV 169
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M ++ SWN+ + I SG + + FD+ RD +WN++I+G ++G+ +AL
Sbjct: 170 FGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADAL 229
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
M + + + + +T ++ L LG+Q+H ++ + G+A +
Sbjct: 230 SHLRRMAQ-AGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALE-----GDAFVR- 282
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD--SLRDRDV-VA 379
++L+D Y K G + A +FD S RD+ A
Sbjct: 283 ---------------------------SSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFA 315
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W+ M+ GY QNG ++A++LFR M+REG + +TL+++ + +++ ++ G+Q+H
Sbjct: 316 WSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVE 375
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+ +++A++ MY+K GN+ AR +F+ + V WTSM+ + A HG G AI
Sbjct: 376 KLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAV-WTSMLCSYASHGQGRIAI 434
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
+LFERM + P+ IT VGVL+AC+H GLV +G+ Y+ M+ + I P+ H+ +VDL
Sbjct: 435 ELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDL 494
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
GR+GLL +A NFIE + + + W +LLSACR+H++ + K+A+EKL+ +E ++G+Y
Sbjct: 495 YGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSY 554
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y++ KW D +R SM+ V+K G SW+ ++N VH F D HPQ IY
Sbjct: 555 VMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIY 614
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+ K+ + +KE+G+ T V+HDVE++ +E L+ HSEKLAIAFG+ISTP T LRI
Sbjct: 615 AYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIF 674
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH AIK+I REIVVRD RFHHFK CSC D+W
Sbjct: 675 KNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 224/484 (46%), Gaps = 75/484 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH +++ G+HL V L N++++ YAK A++VF M + SWN + A +
Sbjct: 131 GKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQ 190
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS- 150
G + + ++F+ P RD+ SW TII G +A+ M Q V+ +T ++
Sbjct: 191 SGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTA 250
Query: 151 -VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VLA L DL G+++H V+ L G V +SL++MY K G A +VFD
Sbjct: 251 FVLAGMLLLPDL--GRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFD----- 303
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV-VTWNSMIAGYSQNGYDFEALGMFANM 268
W+ + RD+ W++M+AGY QNG + EAL +F M
Sbjct: 304 ---HWSPLT---------------------RDMNFAWSTMVAGYVQNGREEEALDLFRRM 339
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L++ + D+FTL S +ACAN+ ++ G+Q+H + + + P+ +A++ YAK G
Sbjct: 340 LRE-GVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGN 398
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+E AR IFD +++ WT+ML Y
Sbjct: 399 LE---------------------------------DARSIFDRACTKNIAVWTSMLCSYA 425
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG----KQIHASALRSGEA 444
+G + A+ELF M E PN TL +LS S + + G KQ+ G
Sbjct: 426 SHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEE---YGIV 482
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S+ N ++ +Y ++G ++ A+ + E + W +++ A H E A E+
Sbjct: 483 PSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEK 542
Query: 505 MLEL 508
+++L
Sbjct: 543 LVQL 546
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 148/330 (44%), Gaps = 70/330 (21%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTL---CSWNTI 85
P +G+ +H R++ L F+++SLM+ Y K + A VFD T +W+T+
Sbjct: 260 PDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTM 319
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
++ Y + GR + A+ +F M+++ V +
Sbjct: 320 VAGYVQNGREE-------------------------------EALDLFRRMLREGVAADR 348
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT+TSV A+C +G + G++VH V K + +++++MYAK G+ A+++FD
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR 408
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
KN++ W SM+ Y+ +G A+ +F
Sbjct: 409 ACTKNIA-------------------------------VWTSMLCSYASHGQGRIAIELF 437
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG--NALISCY 323
M + + P++ TL LSAC+++ + G +++ ++ E+ + N ++ Y
Sbjct: 438 ERMTAE-KMTPNEITLVGVLSACSHVGLVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLY 495
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
+ G ++ A+ +E++ I++ I + TLL
Sbjct: 496 GRSGLLDKAKNFIEENNINH-EAIVWKTLL 524
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ I+ YAK G L+ A +F+ ++ WT+++ +Y G+ + AI +F M +++
Sbjct: 387 SAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMT 446
Query: 143 PTQFTVTSVLASCTALGDLSAGK-KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P + T+ VL++C+ +G +S G+ + G+ + N ++++Y + G AK
Sbjct: 447 PNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKN 506
Query: 202 VFDGMRLKNVS-SWNVVVS---LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ + + + W ++S LH H+ LA + Q+ + D ++ + Y+ N
Sbjct: 507 FIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATN 564
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/771 (34%), Positives = 415/771 (53%), Gaps = 99/771 (12%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FYA L+ S+ + +HAR++ GL S FL L++ + I++A++VFD++
Sbjct: 23 FYASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDL 79
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P W II Y+ F++A+ M+
Sbjct: 80 -------------------------------PRPQVFPWNAIIRGYSRNNHFQDALLMYS 108
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+M +V P FT +L +C L L G+ VH+ V + G V V N L+ +YAK
Sbjct: 109 KMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCR 168
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ VF+G+ L ER +V+W ++++ Y+Q
Sbjct: 169 RLGCARTVFEGLPLP-----------------------------ERTIVSWTAIVSAYAQ 199
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG EAL +F+ M K +KPD L S L+A L+ L+ G+ IHA +++
Sbjct: 200 NGEPVEALEIFSQMRK-MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM------- 251
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
G+E ++ I+ T+ Y K G + A+ +FD ++
Sbjct: 252 -------------GLETEPDLL----------ISLNTM---YAKCGQVATAKILFDKMKS 285
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+++ W AM+ GY +NG KDA++LF M+ + +P+ ++++ +S + + SL+ + +
Sbjct: 286 PNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWM 345
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
RS + +S+ALI M++K G++ AR VF+ R + V W++MIV HG
Sbjct: 346 DEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDR-DVVVWSAMIVGYGLHGQ 404
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EAI L+ M G+ P+ +T++G+L AC H G+V +G ++N M + HKI P H+A
Sbjct: 405 AREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYA 463
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
++DLLGRAG L +AY I+ MP++P V WG+LLSAC+ H++++LGK AA++L I+P
Sbjct: 464 CIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPS 523
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L NLY++ W+ A +R MK G+ K G SWV+++ ++ F V D HP+
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPR 583
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+ I ++ I +KE GFV + + LHD+ ++ E+ L HSE++ IA+GLISTP+ T
Sbjct: 584 YEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGT 643
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TLRI KNLR C +CH+A K I KLV REIVVRD RFHHFK G+CSC DYW
Sbjct: 644 TLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 271/804 (33%), Positives = 428/804 (53%), Gaps = 92/804 (11%)
Query: 2 ETPNPPSLISPLEFYAHLLQ--SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
++P P L Y +LQ ++LKS G+ +H+ I + + L + L+ Y
Sbjct: 93 QSPKPDL---ELRTYCSVLQLCADLKSIQD--GRRIHSIIQSNDVEVDGVLGSKLVFMYV 147
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG------------------RLDLACEV 101
+ +++FD++ + + WN +++ YAK G R++ A ++
Sbjct: 148 TCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKL 207
Query: 102 FNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL 161
F+ + +RD +SW ++I Y G + + +F +M+ + T+ SV+A C+ G L
Sbjct: 208 FDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGML 267
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
G+ +H + +K + + N LL+MY+K
Sbjct: 268 LLGRALHGYAIKASFGKELTLNNCLLDMYSK----------------------------- 298
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
SG L+ A F+ M ER VV+W SMIAGY++ G ++ +F M K+ + PD FT+
Sbjct: 299 --SGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG-ISPDIFTI 355
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+ L ACA L+ GK +H YI + + V NAL
Sbjct: 356 TTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNAL---------------------- 393
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
+D Y K G +G A +F ++ +D+V+W M+ GY +N L +A+ LF
Sbjct: 394 -----------MDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFV 442
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M + KPN+ T++ +L +SLA+L+ G++IH LR+G + V+NAL+ MY K G
Sbjct: 443 EM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCG 501
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
+ AR +F++I ++ VSWT MI HG G EAI F M GI+PD ++++ +L
Sbjct: 502 ALGLARLLFDMIP-EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 560
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC+H GL+++G ++NMM+N I+P H+A +VDLL RAG L +AY FI+ MP+EPD
Sbjct: 561 YACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPD 620
Query: 582 VVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
WG+LL CR++ ++ L + AE + +EP+N+G Y L N+Y+ KWE+ +R+
Sbjct: 621 ATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRER 680
Query: 642 MKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
+ G++K G SW++I+ KVH+F D HP + I + K +KE G P
Sbjct: 681 IGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYA 740
Query: 702 LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDR 761
L ++ KE L HSEK+A+AFG++S P T+R+ KNLRVC DCH KF+ K+V R
Sbjct: 741 LIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKR 800
Query: 762 EIVVRDATRFHHFKKGLCSCRDYW 785
+I++RD+ RFHHFK G CSCR +W
Sbjct: 801 DIILRDSNRFHHFKDGSCSCRGHW 824
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 190/343 (55%), Gaps = 25/343 (7%)
Query: 269 LKDSSLKPDK--FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
L + S KPD T S L CA+L+ ++ G++IH+ I + + G +G+ L+ Y
Sbjct: 90 LINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTC 149
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD------------------IGPARRI 368
G + ++I ++ ++ V + L++GY KIG+ + AR++
Sbjct: 150 GDLREGRRIFDK--VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKL 207
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
FD L DRDV++W +M+ GY NGL++ ++LF M+ G + T+ ++++ S+ L
Sbjct: 208 FDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGML 267
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+ +H A+++ L+++N L+ MYSK+GN+N+A +VF + R VSWTSMI
Sbjct: 268 LLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS-VVSWTSMIAG 326
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
A+ GL + +++LF M + GI PD T +L AC GL+E G+ +N +K +K++
Sbjct: 327 YAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKE-NKMQS 385
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++D+ + G + +A++ M ++ D+V+W +++
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGG 427
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/702 (36%), Positives = 400/702 (56%), Gaps = 66/702 (9%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
++ AYA G ++ A + F+ + +D VSWT ++ Y E RF++++++F EM P
Sbjct: 81 ALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNP 140
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
FT VL +C L S GK VH V+KT + V LL++Y K GD
Sbjct: 141 NHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDAN------ 194
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
D +R+ F++M + DV+ W+ MI+ Y+Q+ EA+
Sbjct: 195 DVLRV-------------------------FEEMPKHDVIPWSFMISRYAQSNQSREAVE 229
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M + L P++FT AS L +CA++E L+LGKQ+H ++++ D GN +S
Sbjct: 230 LFGQMRRAFVL-PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLD-----GNVFVS-- 281
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
L+D Y K G + + ++F L +R+ V W M
Sbjct: 282 --------------------------NALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTM 315
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+VGY Q+G A+ L+++M+ + + T S++L +SLA+++ G QIH+ +L++
Sbjct: 316 IVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIY 375
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V NALI MY+K G+I AR VF+++ R E +SW +MI + HGL EA++ F+
Sbjct: 376 DKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDE-ISWNAMISGYSMHGLVGEALKAFQ 434
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M E P+ +T+V +L+AC++ GL++ GQ Y+ M + I+P H+ MV LLGR+
Sbjct: 435 MMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRS 494
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L +A IE +PLEP+V W +LL AC +H ++DLG ++A+++L I+P + + L
Sbjct: 495 GHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLS 554
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ +W A++RK MK GVKK G SW++ Q VH F V D HP I +
Sbjct: 555 NIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLE 614
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ + ++ G+VPD +VL DVE+D K++ L HSE+LA+AFGLI TP +RI+KNLR
Sbjct: 615 WLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLR 674
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+C DCHSAIK I K+V R+I++RD RFHHF+ G+CSC DYW
Sbjct: 675 ICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 233/505 (46%), Gaps = 100/505 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L++ + VGK VH ++K + +++ L++ Y K + +VF+EMP
Sbjct: 145 FAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ W+ ++S YA+ + + A+ +F +
Sbjct: 205 KHDVIPWSFMISRYAQS-------------------------------NQSREAVELFGQ 233
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + VLP QFT SVL SC ++ +L GK+VH V+K GL G V V+N+L+++YAK
Sbjct: 234 MRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAK--- 290
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
GRLD + F ++ R+ VTWN+MI GY Q+
Sbjct: 291 ----------------------------CGRLDNSMKLFMELPNRNEVTWNTMIVGYVQS 322
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +AL ++ NML + ++ + T +S L ACA+L ++LG QIH+ ++T +D V
Sbjct: 323 GDGDKALSLYKNML-ECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVV 381
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNALI YAK G ++ AR +FD L +R
Sbjct: 382 GNALIDMYAKCGSIK---------------------------------NARLVFDMLSER 408
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D ++W AM+ GY +GL +A++ F+ M PN T ++LS S+ LD G+
Sbjct: 409 DEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYF 468
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
S ++ G + ++ + ++G+++ A ++ I W +++ A H
Sbjct: 469 KSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHND 528
Query: 495 GEEAIQLFERMLELGIKP-DHITYV 518
+ I +++L+ I P D T+V
Sbjct: 529 VDLGIMSAQQILQ--IDPQDEATHV 551
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 230/492 (46%), Gaps = 70/492 (14%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
MP+R++VS+ T+I Y + + + +F + ++ F T++L ++
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
+H+ + K G V +L++ YA G A+ FD + K++ S
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVS----------- 109
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
W M+A Y++N ++L +FA M + P+ FT A
Sbjct: 110 --------------------WTGMVACYAENDRFQDSLQLFAEM-RMVGFNPNHFTFAGV 148
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L AC LE +GK +H +++T ++ VG L+
Sbjct: 149 LKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLL------------------------ 184
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
D Y K GD R+F+ + DV+ W+ M+ Y Q+ +++AVELF M
Sbjct: 185 ---------DLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
R PN +T +++L +S+ +L GKQ+H L+ G ++ VSNAL+ +Y+K G ++
Sbjct: 236 RAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLD 295
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+ ++F + R E V+W +MIV Q G G++A+ L++ MLE ++ +TY VL AC
Sbjct: 296 NSMKLFMELPNRNE-VTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRAC 354
Query: 525 THGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
+E G + +++ +K ++ + +++D+ + G ++ A + +M E D +
Sbjct: 355 ASLAAMELGTQIHSLSLKTIYDKDVVVGN--ALIDMYAKCGSIKNA-RLVFDMLSERDEI 411
Query: 584 AWGSLLSACRVH 595
+W +++S +H
Sbjct: 412 SWNAMISGYSMH 423
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 142/292 (48%), Gaps = 64/292 (21%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
+ + P +F +A +LQS N +GK VH ++K GL +VF+ N+LM+ YAK
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKC----- 291
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
GRLD + ++F +PNR+ V+W T+IV Y + G
Sbjct: 292 --------------------------GRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDG 325
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
A+ ++ M++ QV ++ T +SVL +C +L + G ++HS +KT V V N+L
Sbjct: 326 DKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNAL 385
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK G A+ VFD + ++ SW N
Sbjct: 386 IDMYAKCGSIKNARLVFDMLSERDEISW-------------------------------N 414
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
+MI+GYS +G EAL F M++++ P+K T S LSAC+N L +G+
Sbjct: 415 AMISGYSMHGLVGEALKAF-QMMQETECVPNKLTFVSILSACSNAGLLDIGQ 465
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 77/437 (17%)
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS-SLKPDKFTLASTLSACANLEKLK 295
M +R+ V++ ++I GY Q+ E + +F+ + ++ L P F + L ++E +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNP--FVFTTILKLLVSVECAE 58
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
L +HA I + ++ VG ALI D
Sbjct: 59 LAYSLHACIYKLGHESNAFVGTALI---------------------------------DA 85
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y G + AR+ FD++ +D+V+WT M+ Y +N +D+++LF M G PN++T
Sbjct: 86 YAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTF 145
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+ +L L + GK +H L++ L V L+ +Y+K G+ N RVF +
Sbjct: 146 AGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP- 204
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ + + W+ MI AQ EA++LF +M + P+ T+ VL +C +E Q
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCAS---IENLQL 261
Query: 536 YYNMMKNVHKIKPTPSHFAS--MVDLLGRAGLLQEAYNFIENMP---------------- 577
+ +V K+ + F S ++D+ + G L + +P
Sbjct: 262 GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQ 321
Query: 578 --------------LEPDV----VAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGA 618
LE V V + S+L AC ++LG +I + L I +
Sbjct: 322 SGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVV 381
Query: 619 YSALCNLYSSCGKWEDA 635
+AL ++Y+ CG ++A
Sbjct: 382 GNALIDMYAKCGSIKNA 398
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/640 (39%), Positives = 382/640 (59%), Gaps = 40/640 (6%)
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ N LLN+YAK G+ A+ +FD M ++ SWN ++SL+ SG ++ R FD M RD
Sbjct: 60 IHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRD 119
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V++N++I+G++ NG ALG+F M K+ LKP ++T S L+AC L L+ GKQIH
Sbjct: 120 SVSYNTVISGFAGNGRGGPALGVFLRMQKEG-LKPTEYTHVSVLNACTQLLDLRRGKQIH 178
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK--- 358
II V NAL YA+ G ++ A+++ ++ I NV+ + ++ GY+K
Sbjct: 179 GRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR--NVVTWNLMISGYLKNRQ 236
Query: 359 --------------------------------IGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G I AR++F +R++D V WT M+VG
Sbjct: 237 PEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVG 296
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
QNG +DA+ LF M+ E +P+ YT+S+++S + LASL HG+ +H A G
Sbjct: 297 CAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDD 356
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L VS+AL+ MY K G A +F+ + R VSW SMI A +G EA+ L+E ML
Sbjct: 357 LLVSSALVDMYCKCGVTRDAWTIFSTMQTRN-VVSWNSMIGGYALNGQDLEALSLYENML 415
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
E +KPD +T+VGVL+AC H GLVE+G+ Y+ M + H ++PTP H+A MV+L GR+G +
Sbjct: 416 EENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHM 475
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+A + I +M EP+ + W ++LS C + ++ G++AA L+ + P N+ Y L N+Y
Sbjct: 476 DKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMY 535
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G+W+D A+IR MK VKK +SW++I N+VH F +D HP I+ ++ ++
Sbjct: 536 AARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLI 595
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT-LRIMKNLRVC 745
+++E GF P+T VLHD ED K + + +HSEKLA+A+GLI P T +RI+KN+R C
Sbjct: 596 RKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTC 655
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH +KF+ + R +++RD+ RFHHF +G CSC+DYW
Sbjct: 656 ADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 259/500 (51%), Gaps = 76/500 (15%)
Query: 36 HARIIKCGLHLSVF------LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
A+ +K +HL +F + N L+N YAK+ IS+A+K+FDEM + SWN +LS Y
Sbjct: 40 QAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLY 99
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
AK G ++ +F+ MP+RDSVS+ T+I + GR A+ +F+ M ++ + PT++T
Sbjct: 100 AKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHV 159
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL +CT L DL GK++H ++ L G V V N+L ++YA+ G+ A+ +FD M ++
Sbjct: 160 SVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR 219
Query: 210 NVSSWNVVVS-----------------------------------LHIHSGRLDLARAQF 234
NV +WN+++S +I +G +D AR F
Sbjct: 220 NVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVF 279
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
++ E+D V W MI G +QNG + +AL +F+ ML +++ +PD +T++S +S+CA L L
Sbjct: 280 GEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENA-RPDGYTISSVVSSCAKLASL 338
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
G+ +H G A + GV +++ + L+D
Sbjct: 339 YHGQVVH--------------GKAFLM------GVND-------------DLLVSSALVD 365
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
Y K G A IF +++ R+VV+W +M+ GY NG + +A+ L+ +M+ E KP++ T
Sbjct: 366 MYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVT 425
Query: 415 LSAMLSVSSSLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
+LS ++ GK+ S + + G + ++ ++ ++G+++ A + + +
Sbjct: 426 FVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSM 485
Query: 474 HWRQETVSWTSMIVALAQHG 493
++ WT+++ G
Sbjct: 486 SQEPNSLIWTTVLSVCVMKG 505
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 190/413 (46%), Gaps = 73/413 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWN-------- 83
GK +H RII C L +VF+ N+L + YA+ I A+++FD M ++ + +WN
Sbjct: 174 GKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLK 233
Query: 84 ---------------------------TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTI 116
++L AY + G +D A +VF + +D V WT +
Sbjct: 234 NRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIM 293
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
IV + G+ ++A+ +F EM+ + P +T++SV++SC L L G+ VH G+
Sbjct: 294 IVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
+ + V+++L++MY K G A +F M+ +NV SW
Sbjct: 354 NDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSW---------------------- 391
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
NSMI GY+ NG D EAL ++ NML++ +LKPD T LSAC + ++
Sbjct: 392 ---------NSMIGGYALNGQDLEALSLYENMLEE-NLKPDSVTFVGVLSACVHAGLVEE 441
Query: 297 GKQIHAYIIRTE-FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
GK+ + + T +++ + + G ++ A ++ S N + +TT+L
Sbjct: 442 GKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLI-SSMSQEPNSLIWTTVLSV 500
Query: 356 YIKIGDIGP---ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
+ GDI A R L + V + + Y G KD + RS+++
Sbjct: 501 CVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASI-RSLMK 552
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 174/356 (48%), Gaps = 17/356 (4%)
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
++LK +H + F + N L++ YAK G + A+K+ ++ ++ + ++
Sbjct: 42 KRLKSHMHLHLFKPNDTF-----IHNRLLNLYAKSGEISHARKLFDE--MTQRDNFSWNA 94
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
+L Y K G + R IFD++ RD V++ ++ G+ NG A+ +F M +EG KP
Sbjct: 95 MLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPT 154
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
YT ++L+ + L L GKQIH + ++ V NAL +Y++ G I+ ARR+F+
Sbjct: 155 EYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFD 214
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ R V+W MI ++ E+ I LF M +KPD +T VL A G ++
Sbjct: 215 RMVIRN-VVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYID 273
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSL 588
+ ++ + ++ ++ T M+ + G ++A M LE PD S+
Sbjct: 274 EARKVFGEIREKDEVCWTI-----MIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSV 328
Query: 589 LSACRVHKNLDLGKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
+S+C +L G++ K L+ D+ SAL ++Y CG DA I +M+
Sbjct: 329 VSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQ 384
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 82/198 (41%), Gaps = 33/198 (16%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ G++VH + G++ + + ++L++ Y K A +F M + + SWN+++ Y
Sbjct: 339 YHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGY 398
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A G+ DL A+ ++ M+++ + P T
Sbjct: 399 ALNGQ-DL------------------------------EALSLYENMLEENLKPDSVTFV 427
Query: 150 SVLASCTALGDLSAGKKVH-SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
VL++C G + GK+ S + GL + ++N++ + G A + M
Sbjct: 428 GVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQ 487
Query: 209 K-NVSSWNVVVSLHIHSG 225
+ N W V+S+ + G
Sbjct: 488 EPNSLIWTTVLSVCVMKG 505
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/703 (37%), Positives = 392/703 (55%), Gaps = 67/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G +D A VF+ M +RD +SW +I + G A +F++M Q+ +
Sbjct: 273 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV 332
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T S+L + + G K+VH V+ GL + V ++ ++MY
Sbjct: 333 PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMY------------ 380
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
I G +D A+ FD++ R+V TWN+MI G +Q EAL
Sbjct: 381 -------------------IRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREAL 421
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ PD T + LSA E L+ K++H+Y I VGNAL+
Sbjct: 422 SLFLQMRREGFF-PDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHM 479
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G A +++FD + +R+V WT
Sbjct: 480 YAKCGNTMYA---------------------------------KQVFDDMVERNVTTWTV 506
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G Q+G +A LF M+REG P+ T ++LS +S +L+ K++H+ A+ +G
Sbjct: 507 MISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAG 566
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S L V NAL+ MY+K G+++ ARRVF+ + R + SWT MI LAQHG G +A+ LF
Sbjct: 567 LVSDLRVGNALVHMYAKCGSVDDARRVFDDMLER-DVYSWTVMIGGLAQHGRGLDALDLF 625
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M G KP+ ++V VL+AC+H GLV++G+R + + + I+PT H+ MVDLLGR
Sbjct: 626 VKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGR 685
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA +FI NMP+EP WG+LL AC + NL++ + AA++ L ++P ++ Y L
Sbjct: 686 AGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLL 745
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y++ G WE +R M+ G++K G SW+++ N++H F V D HP+ IY K+
Sbjct: 746 SNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKL 805
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ +K G+VPDT VL + +++ KEQ L HSEKLAI +GL+ TP +R+ KNL
Sbjct: 806 KDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNL 865
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC+DCH+A KFI K+ REIV RDA RFHHFK G+CSC DYW
Sbjct: 866 RVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 245/520 (47%), Gaps = 72/520 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G +D A VF+ M RD SWT +I + GR + A +F++M + L
Sbjct: 170 NALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL 229
Query: 143 PTQFTVTSVL--ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
P T S+L ++ T+ G L K+VH K G + V N+L++MYAK G
Sbjct: 230 PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGS----- 284
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+D AR FD M +RDV++WN+MI G +QNG E
Sbjct: 285 --------------------------IDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHE 318
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A +F M ++ + PD T S L+ + + K++H + + + VG+A +
Sbjct: 319 AFTIFLKMQQEGFV-PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFV 377
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
Y + G ++ AQ IFD L R+V W
Sbjct: 378 HMYIRCGSIDDAQ---------------------------------LIFDKLAVRNVTTW 404
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
AM+ G Q ++A+ LF M REG P+ T +LS + +L+ K++H+ A+
Sbjct: 405 NAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAID 464
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+G L V NAL+ MY+K GN A++VF+ + R T +WT MI LAQHG G EA
Sbjct: 465 AGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVT-TWTVMISGLAQHGCGHEAFS 522
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF +ML GI PD TYV +L+AC G +E + ++ N + A +V +
Sbjct: 523 LFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNA-LVHMY 581
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH-KNLD 599
+ G + +A ++M LE DV +W ++ H + LD
Sbjct: 582 AKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHGRGLD 620
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 177/651 (27%), Positives = 278/651 (42%), Gaps = 142/651 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA II+ G V ++ +L+N Y K
Sbjct: 49 GKKIHAHIIQSGFQSDVRVETALVNMYVKC------------------------------ 78
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +D A +F+ M R+ +SWT +I GR + A F++M ++ +P +T S+
Sbjct: 79 -GSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSI 137
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + + G L K+VHS V GL+ + V N+L++MYAK G A+ VFDGM +++
Sbjct: 138 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDI 197
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW V MI G +Q+G EA +F M +
Sbjct: 198 FSWTV-------------------------------MIGGLAQHGRGQEAFSLFLQMERG 226
Query: 272 SSLKPDKFTLASTLSACA--NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
L P+ T S L+A A + L+ K++H + + F + VGNALI YAK G +
Sbjct: 227 GCL-PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSI 285
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ AR +FD + DRDV++W AM+ G Q
Sbjct: 286 D---------------------------------DARLVFDGMCDRDVISWNAMIGGLAQ 312
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG +A +F M +EG P++ T ++L+ S + + K++H A+ G S L V
Sbjct: 313 NGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRV 372
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+A + MY + G+I+ A+ +F+ + R T +W +MI +AQ G EA+ LF +M G
Sbjct: 373 GSAFVHMYIRCGSIDDAQLIFDKLAVRNVT-TWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 510 IKPDHITYVGVLTA----------------CTHGGLVEQ-------------GQRYYNMM 540
PD T+V +L+A GLV+ G Y
Sbjct: 432 FFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQ 491
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKN 597
++ + + M+ L + G EA++ M E PD + S+LSAC
Sbjct: 492 VFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSAC----- 546
Query: 598 LDLGKIAAEKLLLIEPDNSGAYS------ALCNLYSSCGKWEDAANIRKSM 642
G + K + N+G S AL ++Y+ CG +DA + M
Sbjct: 547 ASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM 597
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 210/432 (48%), Gaps = 75/432 (17%)
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+I Y E G ++A++++ +M ++ P + T S+L +C + L GKK+H+ ++++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
V V +L+NMY K G A+ +FD M +NV SW V
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTV------------------- 101
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
MI G + G EA F M ++ + P+ +T S L+A A+ L+
Sbjct: 102 ------------MIGGLAHYGRGQEAFHRFLQMQREGFI-PNSYTYVSILNANASAGALE 148
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
K++H++ + VGNAL+ YAK G ++
Sbjct: 149 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSID------------------------- 183
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
AR +FD + +RD+ +WT M+ G Q+G ++A LF M R G PN T
Sbjct: 184 --------DARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTY 235
Query: 416 SAMLSVS--SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
++L+ S +S +L+ K++H A ++G S L V NALI MY+K G+I+ AR VF+ +
Sbjct: 236 LSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM 295
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
R + +SW +MI LAQ+G G EA +F +M + G PD TY+ +L TH V G
Sbjct: 296 CDR-DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLN--TH---VSTG 349
Query: 534 QRYYNMMKNVHK 545
+ +K VHK
Sbjct: 350 A--WEWVKEVHK 359
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 257/550 (46%), Gaps = 83/550 (15%)
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
MI GY++ GY +A+ +++ M ++ +P++ T S L AC + LK GK+IHA+II++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
F + +V T L++ Y+K G I A+
Sbjct: 60 GFQS---------------------------------DVRVETALVNMYVKCGSIDDAQL 86
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
IFD + +R+V++WT M+ G G ++A F M REG PN+YT ++L+ ++S +
Sbjct: 87 IFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGA 146
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ K++H+ A+ +G A L V NAL+ MY+K+G+I+ AR VF+ + R + SWT MI
Sbjct: 147 LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVER-DIFSWTVMIG 205
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL--TACTHGGLVEQGQRYYNMMKNVHK 545
LAQHG G+EA LF +M G P+ TY+ +L +A T G +E +K VHK
Sbjct: 206 GLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALE-------WVKEVHK 258
Query: 546 IKPTPSHFA------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL-----SACRV 594
+ +++ + + G + +A + M + DV++W +++ + C
Sbjct: 259 HAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMIGGLAQNGCGH 317
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG----VKKT 650
K+ E + PD++ Y +L N + S G WE + K VG ++
Sbjct: 318 EAFTIFLKMQQEGFV---PDST-TYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVG 373
Query: 651 QGFSWVQIQ-----------NKVHVFGVEDWLHPQRDAIYNKMAK----IWDEIKEMGFV 695
F + I+ +K+ V V W K + ++ +++ GF
Sbjct: 374 SAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFF 433
Query: 696 PDTASVLHDVEEDVKEQMLRHHSE--KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIK 753
PD + ++ + +V E+ L E AI GL+ L M C + A +
Sbjct: 434 PDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHM--YAKCGNTMYAKQ 491
Query: 754 FICKLVDREI 763
+V+R +
Sbjct: 492 VFDDMVERNV 501
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 52/294 (17%)
Query: 23 NLKSRNPFVGKLVHARIIKCGLH-LSVFLKNSLMNFYAKT-------------ESISYAK 68
N+ + N +G + KCG LS+FL+ F+ E++ + K
Sbjct: 400 NVTTWNAMIGGVAQQ---KCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVK 456
Query: 69 KVFD---EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+V + + L N ++ YAK G A +VF+ M R+ +WT +I + G
Sbjct: 457 EVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGC 516
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
A +F++M+++ ++P T S+L++C + G L K+VHS V GL + V N+
Sbjct: 517 GHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNA 576
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYAK G A+ VFD M ++V SW V
Sbjct: 577 LVHMYAKCGSVDDARRVFDDMLERDVYSWTV----------------------------- 607
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
MI G +Q+G +AL +F M K KP+ ++ + LSAC++ + G++
Sbjct: 608 --MIGGLAQHGRGLDALDLFVKM-KLEGFKPNGYSFVAVLSACSHAGLVDEGRR 658
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/692 (37%), Positives = 406/692 (58%), Gaps = 36/692 (5%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
LD A +F+ +PN + ++ ++ +N + +++ + ++ +F+ +L +
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 155 CTALGDLSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+ L L+ G ++H K G + ++L+ MYA G
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACG------------------- 165
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
R+ AR FD+M RDVVTWN MI GYSQN + L ++ M K S
Sbjct: 166 ------------RIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEM-KTSG 212
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+PD L + LSACA+ L GK IH +I F + +L++ YA G + +A+
Sbjct: 213 TEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAR 272
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
++ +Q + +++ T +L GY K+G + AR IFD + ++D+V W+AM+ GY ++
Sbjct: 273 EVYDQ--LPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQP 330
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+A++LF M R P+ T+ +++S +++ +L K IH A ++G +L ++NAL
Sbjct: 331 LEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNAL 390
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K GN+ AR VF + R+ +SW+SMI A A HG + AI LF RM E I+P+
Sbjct: 391 IDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPN 449
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
+T++GVL AC+H GLVE+GQ++++ M N H+I P H+ MVDL RA L++A I
Sbjct: 450 GVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELI 509
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
E MP P+V+ WGSL+SAC+ H ++LG+ AA +LL +EPD+ GA L N+Y+ +W+
Sbjct: 510 ETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWD 569
Query: 634 DAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMG 693
D +RK MK+ GV K + S +++ N+VHVF + D H Q D IY K+ + ++K +G
Sbjct: 570 DVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVG 629
Query: 694 FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIK 753
+ P T+ +L D+EE+ K++++ HSEKLA+ +GLI + + +RI+KNLR+C DCHS +K
Sbjct: 630 YTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMK 689
Query: 754 FICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K+ EIV+RD TRFHHF G+CSCRDYW
Sbjct: 690 LVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 254/538 (47%), Gaps = 73/538 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNPP+ F LL+ + P ++ + + G L F L+ +K +
Sbjct: 76 PNPPT-----RFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSA 130
Query: 64 ISYAKKV---------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
++ ++ F P + +++ YA GR+ A +F+ M +RD V+W
Sbjct: 131 LNLGLEIHGLASKFGFFHADPFIQ----SALIAMYAACGRIMDARFLFDKMSHRDVVTWN 186
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I Y++ + + ++++ EM P + +VL++C G+LS GK +H F+
Sbjct: 187 IMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDN 246
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
G ++ SL+NMYA G +A+ V+D + K++ ++S + G + AR F
Sbjct: 247 GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIF 306
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D+M+E+D+V W++MI+GY+++ EAL +F N ++ + PD+ T+ S +SACAN+ L
Sbjct: 307 DRMVEKDLVCWSAMISGYAESYQPLEALQLF-NEMQRRRIVPDQITMLSVISACANVGAL 365
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
K IH Y + F T P+ NALI YAK G + A+++ E + NVI+++++++
Sbjct: 366 VQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFEN--MPRKNVISWSSMIN 423
Query: 355 GYIKIGDIGPARRIFDSLRDRDV----VAWTAMLVGYEQNGLNKDAVELFRSMVRE---G 407
+ GD A +F ++++++ V + +L GL ++ + F SM+ E
Sbjct: 424 AFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRIS 483
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P+ +Y ++ +Y +A ++ A
Sbjct: 484 PQREHY-------------------------------------GCMVDLYCRANHLRKAM 506
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ + + + W S++ A HG LGE A R+LEL +PDH + VL+
Sbjct: 507 ELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAAT---RLLEL--EPDHDGALVVLS 559
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/694 (37%), Positives = 403/694 (58%), Gaps = 39/694 (5%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A VF + + + W T+I + +++ ++V MV +LP +T +L S
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C + G+++H V+K G + V SL++MY + A VFD ++V S+
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+++ + G + A+ FD++ +DVV+WN+MI+GY++ G EAL +F M+K ++
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMK-MNV 192
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PD+ T + LSACA+ ++LG+Q+H+++ FD+ + NALI
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALI-------------- 238
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
D Y K G++ A +F L +DV++W ++ GY L K
Sbjct: 239 -------------------DLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYK 279
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSLSVSNA 452
+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH + G ++ S+ +
Sbjct: 280 EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 339
Query: 453 LITMYSKAGNINAARRVFN-LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI MY+K G+I AA +VFN ++H + SW +MI A HG + + LF RM ++GI+
Sbjct: 340 LIDMYAKCGDIEAAHQVFNSMLH--KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIE 397
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD IT+VG+L+AC+H G+++ G+ + M +K+ P H+ M+DLLG +GL +EA
Sbjct: 398 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 457
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I M +EPD V W SLL AC++H N++L + A+ L+ IEP+N +Y L N+Y+S G+
Sbjct: 458 MINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGR 517
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
WED A IR + +KK G S +++ + V F V D HPQ IY + ++ ++E
Sbjct: 518 WEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEE 577
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +CH A
Sbjct: 578 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 637
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + K+ REIV RD TRFHHF+ G+CSC DYW
Sbjct: 638 TKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 236/502 (47%), Gaps = 70/502 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H +++K G L +++ SL++ Y + + A KVFD
Sbjct: 67 FPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSS 126
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G + A ++F+ +P +D VSW +I Y E G +K A+ +F E
Sbjct: 127 HRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEE 186
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T +VL++C G + G++VHS+V G + + N+L+++Y+K G+
Sbjct: 187 MMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE 246
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F G+ K+V SW N++I GY+
Sbjct: 247 VETACGLFQGLSYKDVISW-------------------------------NTLIGGYTHM 275
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT--G 313
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI + T
Sbjct: 276 NLYKEALLLFQEMLR-SGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 334
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +LI YAK G DI A ++F+S+
Sbjct: 335 SLRTSLIDMYAKCG---------------------------------DIEAAHQVFNSML 361
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+ + +W AM+ G+ +G + +LF M + G +P++ T +LS S LD G+
Sbjct: 362 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRH 421
Query: 434 IHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
I S + + + L +I + +G A + N + + V W S++ A H
Sbjct: 422 IFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMH 481
Query: 493 GLGEEAIQLFERMLELGIKPDH 514
G E A + +++ I+P++
Sbjct: 482 GNVELAESFAQNLIK--IEPEN 501
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 224/423 (52%), Gaps = 9/423 (2%)
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
H L A + F+ + E + + WN+MI G++ + +L ++ M+ L P+ +T
Sbjct: 10 HFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVS-LGLLPNSYTFP 68
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
L +CA + G+QIH +++ FD V +LIS Y + +E A K+ ++S S
Sbjct: 69 FLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRS--S 126
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
+ +V+++T L+ GY GDI A+++FD + +DVV+W AM+ GY + G K+A+ELF
Sbjct: 127 HRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEE 186
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M++ +P+ T +LS + S++ G+Q+H+ G S+L + NALI +YSK G
Sbjct: 187 MMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE 246
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A +F + ++ + +SW ++I L +EA+ LF+ ML G P+ +T + VL
Sbjct: 247 VETACGLFQGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLP 305
Query: 523 ACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC H G ++ G+ + + K + + S S++D+ + G ++ A+ +M L
Sbjct: 306 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKS 364
Query: 582 VVAWGSLLSACRVHKNLD--LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
+ +W +++ +H D + + + IEPD+ + L + S G + +I
Sbjct: 365 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDI-TFVGLLSACSHSGMLDLGRHIF 423
Query: 640 KSM 642
+SM
Sbjct: 424 RSM 426
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIK--CGLHLSVFLKNSLMNFYA 59
ETPN +++S L AHL + +G+ +H I K G+ + L+ SL++ YA
Sbjct: 293 ETPNDVTMLSVLPACAHLGAID-------IGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 345
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTT 115
K I A +VF+ M K+L SWN ++ +A GR D + ++F+ M D +++
Sbjct: 346 KCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVG 405
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQD 139
++ + G +F M QD
Sbjct: 406 LLSACSHSGMLDLGRHIFRSMTQD 429
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/737 (36%), Positives = 407/737 (55%), Gaps = 70/737 (9%)
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKT----LCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
S+++ E++ + K V + + + L +++ YA+ + A +VF M
Sbjct: 266 SILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQT 325
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
+ ++W+ II + + G A+R F M Q+ +LP + T S+L T L ++H
Sbjct: 326 NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIH 385
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+ + GL + N+L+N+Y + D
Sbjct: 386 LLITEHGLDDTTTMRNALVNVYGRCESP-------------------------------D 414
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AR FDQ+ ++++WNSMI Y Q +AL +F M + ++PD+ + L AC
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTM-QQQGIQPDRVNFMTILGAC 473
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
+ K +H + VE+SG+ ++
Sbjct: 474 TIGSHGRTRKLVH--------------------------------QCVEESGLGGSPLVQ 501
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
T+L++ Y K G++ A I + ++ + AW ++ GY +G +++A+E ++ + E
Sbjct: 502 -TSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAI 560
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
+ T ++L+ +S SL GK IH++A+ G S + V NAL MYSK G++ ARR
Sbjct: 561 PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARR 620
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F+ + R VSW M+ A AQHG EE ++L +M + G+K + IT+V VL++C+H G
Sbjct: 621 IFDSMPIRS-AVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 679
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L+ +G +Y++ + + I+ H+ +VDLLGRAG LQEA +I MPLEP +V W SL
Sbjct: 680 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASL 739
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L ACRV K+LD GK+AA KLL ++P NS A L N+YS G W++AA +R++M VK
Sbjct: 740 LGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVK 799
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G S +Q++NKVH F V D HP+ IY+K+ ++ ++E G+VPDT VLHDV+E+
Sbjct: 800 KVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEE 859
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE +L +HSEKLAIAFGLISTPE ++L I KNLRVC DCH+A KFI K+ REIVVRD
Sbjct: 860 QKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDN 919
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHF+ G CSC+DYW
Sbjct: 920 HRFHHFRDGSCSCKDYW 936
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 174/681 (25%), Positives = 281/681 (41%), Gaps = 153/681 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L++ +L S R G LVHA ++ G + + +L+N Y K +
Sbjct: 56 PNAITLVA-------VLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGT 108
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ VF+EM K + +WN +L Y+ QG W
Sbjct: 109 LLDAQSVFEEMAEKNVVTWNAMLGVYSLQG-----------------CCW---------- 141
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
K A+ +F M+ + V T +VL S L GK +HS V ++ S V V
Sbjct: 142 ---KLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVN 198
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+L+N Y K G A+ VFDGM ++V +W
Sbjct: 199 TALVNTYTKCGSLTDARKVFDGMPCRSVGTW----------------------------- 229
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
NSMI+ YS + EA +F M ++ + D+ T S L AC N E L+ GK +
Sbjct: 230 --NSMISAYSISERSGEAFFIFQRMQQEGE-RCDRVTFLSILDACVNPETLQHGKHVRES 286
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I T F+ VG ALI+ YA+ E
Sbjct: 287 ISETSFELDLFVGTALITMYARCRSPE--------------------------------- 313
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A ++F ++ +++ W+A++ + +G +A+ FR M +EG PN T ++L+ +
Sbjct: 314 DAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 373
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ + L+ +IH G + ++ NAL+ +Y + + + AR VF+ + +SW
Sbjct: 374 TPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWN 432
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI Q ++A+QLF M + GI+PD + ++ +L ACT G + K V
Sbjct: 433 SMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGS-------HGRTRKLV 485
Query: 544 HK------IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH-- 595
H+ + +P S+V++ +AG L A ++ M E + AW L++ +H
Sbjct: 486 HQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHGR 544
Query: 596 --------KNLDLGKIAAEKLLLIEPDNSGAYS--------------------------A 621
+ L L I +K+ I N+ S A
Sbjct: 545 SREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA 604
Query: 622 LCNLYSSCGKWEDAANIRKSM 642
L N+YS CG E+A I SM
Sbjct: 605 LTNMYSKCGSMENARRIFDSM 625
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 245/531 (46%), Gaps = 75/531 (14%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y++ G L A F + R+ VSW +I Y+ F+ A+ +F M+ + V P T+
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+VL SC + +L G VH+ ++ G V +LLNMY K G + A++VF+ M
Sbjct: 62 VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE-ALGMFAN 267
KNV VTWN+M+ YS G ++ A+ +F
Sbjct: 122 KNV-------------------------------VTWNAMLGVYSLQGCCWKLAVELFTR 150
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML + +K + T + L++ + + L+ GK IH+ + +E V AL++ Y K G
Sbjct: 151 MLLE-GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCG 209
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+L D AR++FD + R V W +M+ Y
Sbjct: 210 -----------------------SLTD----------ARKVFDGMPCRSVGTWNSMISAY 236
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+ + +A +F+ M +EG + + T ++L + +L HGK + S + L
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL 296
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V ALITMY++ + A +VF + + ++W+++I A A HG EA++ F M +
Sbjct: 297 FVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGHCGEALRYFRMMQQ 355
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI P+ +T++ +L T +E+ R + ++ H + T + ++V++ GR
Sbjct: 356 EGILPNRVTFISLLNGFTTPSGLEELSRIH-LLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 568 EAYNFIENMPLEPDVVAWGSLLS---ACRVHKN-LDLGKIAAEKLLLIEPD 614
+A + + L P++++W S++ C H + L L + ++ I+PD
Sbjct: 415 DARTVFDQLEL-PNLISWNSMIGIYVQCERHDDALQLFRTMQQQ--GIQPD 462
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 200/461 (43%), Gaps = 84/461 (18%)
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ G L A A F ++ R+VV+WN MI+ YS EAL +F ML + + P+
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLE-GVAPNAI 59
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
TL + L++C + +L+ G +HA + F V AL++ Y K G
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCG------------ 107
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN-KDAVE 398
TLLD A+ +F+ + +++VV W AML Y G K AVE
Sbjct: 108 -----------TLLD----------AQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVE 146
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
LF M+ EG K N T +L+ +L GK IH+ S + + V+ AL+ Y+
Sbjct: 147 LFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYT 206
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K G++ AR+VF+ + R +W SMI A + EA +F+RM + G + D +T++
Sbjct: 207 KCGSLTDARKVFDGMPCRS-VGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFL 265
Query: 519 GVLTACT------HGGLV-----------------------------EQGQRYYNMMKNV 543
+L AC HG V E + + MK
Sbjct: 266 SILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQT 325
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDL 600
+ I +++++ G EA + M E P+ V + SLL+ L+
Sbjct: 326 NLIT-----WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE- 379
Query: 601 GKIAAEKLLLIE---PDNSGAYSALCNLYSSCGKWEDAANI 638
+++ LL+ E D + +AL N+Y C +DA +
Sbjct: 380 -ELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTV 419
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 159/380 (41%), Gaps = 78/380 (20%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
KLVH + + GL S ++ SL+N YAK + A+ + EM + + +WN +++ YA
Sbjct: 483 KLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALH 542
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT-QFTVTSV 151
GR A E + + +Q + +P + T SV
Sbjct: 543 GRSREALEAY--------------------------------QKLQLEAIPVDKVTFISV 570
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT+ L+ GK +HS V+ GL V V N+L NMY+K G A+ +FD M +++
Sbjct: 571 LNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRS- 629
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
V+WN M+ Y+Q+G E L + M +
Sbjct: 630 ------------------------------AVSWNGMLQAYAQHGESEEVLKLIRKM-EQ 658
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQI-----HAYIIRTEFDATGPVGNALISCYAKV 326
+K + T S LS+C++ + G Q H I + + G L+ +
Sbjct: 659 EGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYG----CLVDLLGRA 714
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G ++ A+K + + + ++ + +LL D+ + L + D +A +V
Sbjct: 715 GKLQEAEKYISKMPLEP-GIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVL 773
Query: 387 ---YEQNGLNKDAVELFRSM 403
Y + G K+A +L R+M
Sbjct: 774 SNIYSERGDWKNAAKLRRAM 793
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK++H+ ++CGL V +KN+L N Y+K S+ A+++FD MP+++ SWN +L AYA+
Sbjct: 583 GKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ 642
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + +++ +M Q+ V T SV
Sbjct: 643 HGESE-------------------------------EVLKLIRKMEQEGVKLNGITFVSV 671
Query: 152 LASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L+SC+ G ++ G + HS G+ L+++ + G A+ M L+
Sbjct: 672 LSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEP 731
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ +W ++ LD + +++E D
Sbjct: 732 GIVTWASLLGACRVQKDLDRGKLAAGKLLELD 763
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/703 (37%), Positives = 391/703 (55%), Gaps = 65/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++ YAK G L A +F+ M +RD V+W +I + G +A+++ ++M ++ +
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+ VL + L GK +H + V+ V V LL+MYAK + A+ +
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M + R+ V+W++MI GY + EAL
Sbjct: 268 FDVMGV-------------------------------RNEVSWSAMIGGYVASDCMKEAL 296
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M+ ++ P TL S L ACA L L G+++H YII
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYII----------------- 339
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
K+G V L+++ TLL Y K G I A R FD + +D V+++A
Sbjct: 340 --KLGSV--------------LDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSA 383
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G QNG A+ +FR M G P+ T+ +L S LA+L HG H + G
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 443
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
A+ + NALI MYSK G I+ AR VFN + R + VSW +MI+ HGLG EA+ LF
Sbjct: 444 FATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHGLGMEALGLF 502
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+L LG+KPD IT++ +L++C+H GLV +G+ +++ M I P H MVD+LGR
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR 562
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AGL+ EA++FI NMP EPDV W +LLSACR+HKN++LG+ ++K+ + P+++G + L
Sbjct: 563 AGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLL 622
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+YS+ G+W+DAA+IR + K G+KK G SW++I VH F D H Q I K+
Sbjct: 623 SNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKL 682
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ E+K +G+ + + V DVEE+ KEQ+L +HSEKLAIAFG+++ + + KNL
Sbjct: 683 EELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNL 742
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCH+AIKF+ + REI VRDA RFHHFK G C+C D+W
Sbjct: 743 RVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 204/470 (43%), Gaps = 99/470 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++ V + L++ YAK + + YA+K+FD M V+ SW+ ++ Y
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVA 288
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ A E+F+ M +++D + PT T+ SV
Sbjct: 289 SDCMKEALELFDQM------------------------------ILKDAMDPTPVTLGSV 318
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L DLS G+K+H +++K G + + N+LL+MYAK G + D +R
Sbjct: 319 LRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCG------VIDDAIRF--- 369
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
FD+M +D V+++++++G QNG AL +F M++
Sbjct: 370 ----------------------FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQL 406
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S + PD T+ L AC++L L+ G H Y+I F + NALI Y+K G +
Sbjct: 407 SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISF 466
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AR +F+ + D+V+W AM++GY +G
Sbjct: 467 ---------------------------------AREVFNRMDRHDIVSWNAMIIGYGIHG 493
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVS 450
L +A+ LF ++ G KP++ T +LS S + G+ + R +
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE 497
++ + +AG I+ A + + + W++++ A H LGEE
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEE 603
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 203/415 (48%), Gaps = 45/415 (10%)
Query: 208 LKNVSSWNVVV-----SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LKN S+ + V L++ ++ LAR FD++ V+ WN +I Y+ NG A+
Sbjct: 35 LKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAI 94
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ +ML ++P+K+T L AC+ L ++ G +IH++
Sbjct: 95 DLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH------------------- 134
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
AK+ G+E +V T L+D Y K G + A+R+F S+ RDVVAW A
Sbjct: 135 -AKMFGLES-------------DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G GL DAV+L M EG PN+ T+ +L +L HGK +H +R
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + V L+ MY+K + AR++F+++ R E VSW++MI +EA++LF
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE-VSWSAMIGGYVASDCMKEALELF 299
Query: 503 ERM-LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
++M L+ + P +T VL AC + +G++ + + + + +++ +
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLG-NTLLSMYA 358
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN--LDLGKIAAEKLLLIEPD 614
+ G++ +A F + M D V++ +++S C + N + L +L I+PD
Sbjct: 359 KCGVIDDAIRFFDEMN-PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
NNY +L SL K+IH L++ + SV + L +Y + ARR+F
Sbjct: 9 NNYL--HLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ I + W +I A A +G + AI L+ ML LG++P+ TY VL AC+ +
Sbjct: 67 DEIP-NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
E G ++ K + ++ ++VD + G+L EA +M DVVAW ++++
Sbjct: 126 EDGVEIHSHAK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIA 183
Query: 591 ACRVHKNLD 599
C ++ D
Sbjct: 184 GCSLYGLCD 192
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/691 (38%), Positives = 388/691 (56%), Gaps = 78/691 (11%)
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP---TQFTVTSVLASCTALGDLSAGKKVH 168
SW I G+F +AI +F++M + V P ++ + L SC LG + +H
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKV-------------GDEMMAKAVFDGMRLKNVSSWN 215
+ +++G N+LLN+ K+ G+ + A ++ MR
Sbjct: 73 ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMR-------- 124
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
FD+M+ERD V+WN++I G +++ EAL M M +D +
Sbjct: 125 ----------------KVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFM- 167
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
PD FTL++ L A +K G +H Y I+ FD VG++LI YA ++ + K+
Sbjct: 168 PDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKV 227
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
FDS D D V W +ML GY QNG ++
Sbjct: 228 ---------------------------------FDSFSDCDAVLWNSMLAGYAQNGSVEE 254
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
A+ +FR M++ G +P T S+++ +L+ L GKQ+HA +R+ ++ +S++LI
Sbjct: 255 ALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLID 314
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDH 514
MY K GN++ ARRVFN I + VSWT+MI+ A HG EA LFERM ELG +KP+H
Sbjct: 315 MYCKCGNVDIARRVFNGIQ-SPDIVSWTAMIMGYALHGPTTEAFVLFERM-ELGNVKPNH 372
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
IT++ VLTAC+H GLV+ G +Y+N M N + P+ H A++ D LGRAG L EAYNFI
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFIS 432
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
M ++P W +LL ACRVHKN L + A+K+ +EP + G++ L N+YS+ G+W +
Sbjct: 433 EMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 492
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
AA +RKSM+ G+KK SW++++NK+HVF D HP D I + + +++ G+
Sbjct: 493 AAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGY 552
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VP+ VL D+EE+ K ++L HSEKLAI FG+ISTP TT+R+MKNLRVC DCH A KF
Sbjct: 553 VPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKF 612
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I K+V REIVVRD RFH FK G CSC D+W
Sbjct: 613 ISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 221/479 (46%), Gaps = 91/479 (18%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA I+ G F N+L+N K + P T + + +G
Sbjct: 71 LHALAIRSGSFADRFTANALLNLCIKLPGFHH--------PFGT--------NGPSGEGG 114
Query: 95 LDLAC-----EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
L+ A +VF+ M RD+VSW T+I+ E R + A+ M EM +D +P FT++
Sbjct: 115 LESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLS 174
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+VL D+ G VH + +K G V V +SL++MYA
Sbjct: 175 TVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYA------------------ 216
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+ ++D + FD + D V WNSM+AGY+QNG EALG+F ML
Sbjct: 217 -------------NCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRML 263
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + ++P T +S + A NL L+LGKQ+HAY+IR F+ + ++LI Y K G V
Sbjct: 264 Q-AGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNV 322
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+IA+++ F+ ++ D+V+WTAM++GY
Sbjct: 323 DIARRV---------------------------------FNGIQSPDIVSWTAMIMGYAL 349
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLS 448
+G +A LF M KPN+ T A+L+ S +D+G K ++ + + G SL
Sbjct: 350 HGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLE 409
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE-AIQLFE 503
AL +AG+++ A + + + + W++++ A H L EE A ++FE
Sbjct: 410 HCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFE 468
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 63/259 (24%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +VH IK G VF+ +SL++ YA + Y+ KVFD WN++L+ YA+
Sbjct: 189 GMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQ 248
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++ A+ +F M+Q V P T +S+
Sbjct: 249 NGSVE-------------------------------EALGIFRRMLQAGVRPVPVTFSSL 277
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ + L L GK++H+++++ + + +++SL++MY K G+ +A+ VF+G++
Sbjct: 278 IPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQ---- 333
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
D+V+W +MI GY+ +G EA +F M +
Sbjct: 334 ---------------------------SPDIVSWTAMIMGYALHGPTTEAFVLFERM-EL 365
Query: 272 SSLKPDKFTLASTLSACAN 290
++KP+ T + L+AC++
Sbjct: 366 GNVKPNHITFLAVLTACSH 384
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +HA +I+ + ++F+ +SL++ Y K ++ A++VF+ + + SW ++ YA
Sbjct: 289 LGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA 348
Query: 91 KQGRLDLACEVF------NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
G A +F N+ PN +++ ++ + G N + F M
Sbjct: 349 LHGPTTEAFVLFERMELGNVKPNH--ITFLAVLTACSHAGLVDNGWKYFNSM------SN 400
Query: 145 QFTVTSVLASCTALGDL--SAG--KKVHSFVVKTGLSGCVNVTNSLLNMYA----KVGDE 196
Q+ L C AL D AG + ++F+ + + +V ++LL V E
Sbjct: 401 QYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAE 460
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
+AK +F+ + K++ S ++ +++ SGR + A
Sbjct: 461 EVAKKIFE-LEPKSMGSHVILSNMYSASGRWNEA 493
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/694 (38%), Positives = 396/694 (57%), Gaps = 69/694 (9%)
Query: 95 LDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTVTSV 151
L A +F L P+ R + S+ +I ++ G ++A+ +FVEM+ D V P Q TV +
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ SC+ + DLS G+ V ++ K G V NSL++MYA GD + A +F +++K V
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGV 237
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+ WN+MIAGY +NG E + MF ML+
Sbjct: 238 -------------------------------IAWNAMIAGYVKNGDWKEVVEMFKGMLEV 266
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ D+ TL S +AC L LG+ I Y
Sbjct: 267 RA-PFDEVTLLSVATACGRLGDANLGQWIAEY---------------------------- 297
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
E+ G+ +A T L+D Y K G++ ARR+FD + RDVVAW+AM+ GY Q+
Sbjct: 298 ----AEEKGMLRSRNLA-TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSD 352
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++A+ +F M PN+ T+ ++LS + L +L+ GK +H+ R ++ +
Sbjct: 353 RCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGT 412
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ Y+K G I A + F + R T +WT++I +A +G EA++LF MLE I+
Sbjct: 413 ALVDFYAKCGCIKDAVKAFESMPVRN-TWTWTALIKGMASNGRSREALELFSSMLEANIE 471
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P +T++GVL AC+HG LVE+G+R++ M + I P H+ MVDLLGRAGL+ EAY
Sbjct: 472 PTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQ 531
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI NMP+EP+ V W +LLSAC VHKN+++G+ A ++++ ++P +SG Y L N Y+S G+
Sbjct: 532 FIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQ 591
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W++AA +RK MK GV+K G S ++++ + F ED HPQ IY K+ ++ + IK
Sbjct: 592 WKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKM 651
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G++P+TA DV+E K+ + HHSEKLAIAFGL+ + T+R+ KNLRVC DCHSA
Sbjct: 652 VGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSA 711
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+ +REI+VRD RFHHFK GLCSC DYW
Sbjct: 712 TKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 205/474 (43%), Gaps = 100/474 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ V A K G + F+ NSL++ YA + A +F + VK + +WN +++ Y
Sbjct: 189 VGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYV 248
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G +K + MF M++ + + T+ S
Sbjct: 249 KN-------------------------------GDWKEVVEMFKGMLEVRAPFDEVTLLS 277
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V +C LGD + G+ + + + G+ N+ +L++MYAK G+ A+ +FD M ++
Sbjct: 278 VATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRD 337
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +W+ ++S GY+Q+ EAL +F N ++
Sbjct: 338 VVAWSAMIS-------------------------------GYTQSDRCREALAIF-NEMQ 365
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ + P+ T+ S LSACA L L+ GK +H+YI R + T +G AL+ YAK G ++
Sbjct: 366 GTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIK 425
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A K F+S+ R+ WTA++ G N
Sbjct: 426 DAVK---------------------------------AFESMPVRNTWTWTALIKGMASN 452
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
G +++A+ELF SM+ +P + T +L S ++ G++ S + G +
Sbjct: 453 GRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEH 512
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
++ + +AG I+ A + + V W +++ A H +GEEA++
Sbjct: 513 YGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALK 566
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++ YAK G LD A +F+ M +RD V+W+ +I Y + R + A+ +F EM +V
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+ SVL++C LG L GK VHS++ + L V + +L++ YAK G A
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYD 258
F+ M ++N +W ++ +GR A F M+E ++ VT+ ++ S
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E F +M +D + P + L + L + + +I + V A
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDL---LGRAGLIDEAYQFIRNMPIEPNAVVWRA 547
Query: 319 LISCYAKVGGVEIAQKIVEQ 338
L+S VEI ++ ++Q
Sbjct: 548 LLSACTVHKNVEIGEEALKQ 567
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/707 (36%), Positives = 394/707 (55%), Gaps = 68/707 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y K R+DLAC VF+ M R+ VSWT ++ Y + G K ++ + EM V
Sbjct: 43 NDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVK 102
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT ++ L +C ALG + G ++H VK+G V N+ ++MY+K G
Sbjct: 103 PNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCG-------- 154
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
R+ +A F++M R++V+WN+MIAG++ G ++L
Sbjct: 155 -----------------------RIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSL 191
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + PD+FT STL AC L ++ G QIHA +I F
Sbjct: 192 VLFQRMQGQGEV-PDEFTFTSTLKACGALGAIRGGTQIHASLITRGFP------------ 238
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
IS N+IA + ++D Y K G + A+++FD + +++++W+A
Sbjct: 239 ------------------ISIRNIIA-SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSA 279
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ Q G +A++LFR + + + LS M+ V + LA ++ GKQ+H L+
Sbjct: 280 LIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVP 339
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+SV+N++I MY K G A R+F+ + R VSWT MI +HGLGE+AI LF
Sbjct: 340 SGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRN-VVSWTVMITGYGKHGLGEKAIHLF 398
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
RM GI+ D + Y+ +L+AC+H GL+ + Q Y++ + N H++KP H+A MVD+LGR
Sbjct: 399 NRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGR 458
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA N IENM L+P+ W +LLSACRVH NL++G+ E L ++ DN Y +
Sbjct: 459 AGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMM 518
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ G W++ +RK +K G+KK G SWV+I ++H F D HP + I+ +
Sbjct: 519 SNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEML 578
Query: 683 AKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS---TPENTTLRI 738
++ +K E+G+ LHDVEE+ KE+ LR HSEKLAI L+ + +R+
Sbjct: 579 KEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRV 638
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH IK + K++ + VVRDA RFH F+ GLCSC DYW
Sbjct: 639 FKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 213/456 (46%), Gaps = 55/456 (12%)
Query: 74 MPVKTLCSW-----NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
M VK+ W N + Y+K GR+ +A +VFN MP R+ VSW +I + G +
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VTNSL 186
++ +F M +P +FT TS L +C ALG + G ++H+ ++ G + + +++
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
+++YAK G A+ VFD + KN+ SW +
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIEQKNLISW-------------------------------S 278
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
++I G++Q G EA+ +F L++S D F L+ + A+L ++ GKQ+H YI++
Sbjct: 279 ALIQGFAQEGNLLEAMDLF-RQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILK 337
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
V N++I Y K G E A+++ + + NV+++T ++ GY K G A
Sbjct: 338 VPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVR--NVVSWTVMITGYGKHGLGEKAI 395
Query: 367 RIFDSLR----DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSV 421
+F+ ++ + D VA+ A+L +GL +++ E F + KPN + M+ +
Sbjct: 396 HLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDI 455
Query: 422 SSSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET- 479
L K I L+ E + L++ GN+ R V ++ +R +T
Sbjct: 456 LGRAGQLKEAKNLIENMKLKPNEG----IWQTLLSACRVHGNLEIGREVGEIL-FRMDTD 510
Query: 480 --VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
V++ M A+ G +E ++ + + G+K +
Sbjct: 511 NPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKE 546
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 130/256 (50%), Gaps = 3/256 (1%)
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
++I L+D Y K + A +FD + +R+VV+WTA++ GY Q G K ++ L M
Sbjct: 37 FDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEM 96
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
G KPN +T S L +L +++G QIH ++SG V NA I MYSK G I
Sbjct: 97 GYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRI 156
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A +VFN + +R VSW +MI G G +++ LF+RM G PD T+ L A
Sbjct: 157 GMAEQVFNKMPFRN-LVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKA 215
Query: 524 CTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
C G + G Q + +++ I +++VDL + G L EA + + + ++
Sbjct: 216 CGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIE-QKNL 274
Query: 583 VAWGSLLSACRVHKNL 598
++W +L+ NL
Sbjct: 275 ISWSALIQGFAQEGNL 290
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 38/200 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H I+K L + + NS+++ Y K A+++F EM V+ + SW +++ Y K
Sbjct: 328 GKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGK 387
Query: 92 QGRLDLACEVFNLMP----NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL----- 142
G + A +FN M D V++ ++ + G + + F + + +
Sbjct: 388 HGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIE 447
Query: 143 ----------------------------PTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
P + ++L++C G+L G++V + +
Sbjct: 448 HYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRM 507
Query: 175 GLSGCVNVTNSLLNMYAKVG 194
VN + N+YA+ G
Sbjct: 508 DTDNPVNYV-MMSNIYAEAG 526
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/704 (35%), Positives = 406/704 (57%), Gaps = 39/704 (5%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV--QDQVLP 143
++A + L+ A +VF+ +P +S +W T+I Y +I F++MV + Q P
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
++T ++ + + LS G+ +H +K+ + V V NSL++ Y GD
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGD-------- 183
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
LD A F + E+DVV+WNSMI G+ Q G +AL
Sbjct: 184 -----------------------LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 220
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M + +K T+ LSACA + L+ G+++ +YI + + NA++ Y
Sbjct: 221 LFKKM-ESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMY 279
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
K G +E A+++ + + + + +TT+LDGY D AR + +++ +D+VAW A+
Sbjct: 280 TKCGSIEDAKRLFD--AMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNAL 337
Query: 384 LVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+ YEQNG +A+ +F + +++ K N TL + LS + + +L+ G+ IH+ ++G
Sbjct: 338 ISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNG 397
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V++ALI MYSK G++ AR VFN + +++ W++MI LA HG G EA+ +F
Sbjct: 398 IKMNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHGCGSEAVDMF 456
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M E +KP+ +T+ V AC+H GLV++ + + M++ + I P H+A +VD+LGR
Sbjct: 457 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGR 516
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+G L++A FIE MP+ P WG+LL AC++H NL L ++A +LL +EP N GA+ L
Sbjct: 517 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLL 576
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ GKW++ + +RK M+ G+KK G S ++I +H F D HP + +Y K+
Sbjct: 577 SNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 636
Query: 683 AKIWDEIKEMGFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
++ +++K G+ P+ + VL + EE++KEQ L HSEKLAI +GLIST +R++KN
Sbjct: 637 HEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKN 696
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C DCH+ K I +L +REI+VRD RFHHF+ G CSC D+W
Sbjct: 697 LRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 205/432 (47%), Gaps = 34/432 (7%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++ Y G LD AC+VF + +D VSW ++I + + G A+ +F +M + V
Sbjct: 172 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 231
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ T+ VL++C + DL G++V S++ + ++ + + N++L+MY K G AK +
Sbjct: 232 ASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 291
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M K+ +W ++ + S + AR + M ++D+V WN++I+ Y QNG EAL
Sbjct: 292 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEAL 351
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F + ++K ++ TL STLSACA + L+LG+ IH+YI + V +ALI
Sbjct: 352 LVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHM 411
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+K GD+ AR +F+S+ RDV W+A
Sbjct: 412 YSKC---------------------------------GDLEKAREVFNSVEKRDVFVWSA 438
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS- 441
M+ G +G +AV++F M KPN T + + S +D + + S
Sbjct: 439 MIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSY 498
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G ++ + ++G + A + + T W +++ A H A
Sbjct: 499 GIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMA 558
Query: 502 FERMLELGIKPD 513
R+LEL + D
Sbjct: 559 CTRLLELEPRND 570
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 142/273 (52%), Gaps = 33/273 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + K R+ G+ V + I + +++++ L N++++ Y K SI AK++FD M K
Sbjct: 240 VLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 299
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-V 137
+W T+L YA + A EV N MP +D V+W +I Y + G+ A+ +F E+ +
Sbjct: 300 NVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQL 359
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
Q + Q T+ S L++C +G L G+ +HS++ K G+ VT++L++MY+K GD
Sbjct: 360 QKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLE 419
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ VF+ + +RDV W++MI G + +G
Sbjct: 420 KAREVFNSVE-------------------------------KRDVFVWSAMIGGLAMHGC 448
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
EA+ MF M +++++KP+ T + AC++
Sbjct: 449 GSEAVDMFYKM-QEANVKPNGVTFTNVFCACSH 480
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/713 (35%), Positives = 398/713 (55%), Gaps = 69/713 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
CS + +L R +L + D SW ++I G A+R F M +
Sbjct: 10 FCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRK 69
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ PT+ + + +C++L D+ +GK+ H G + V+++L+ MY+ G
Sbjct: 70 LSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG---- 125
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+L+ AR FD++ +R++V+W SMI GY NG
Sbjct: 126 ---------------------------KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 259 FEALGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+A+ +F ++L D+++ D + S +SAC+ + L + IH+++I+ FD
Sbjct: 159 LDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGV 218
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VGN L+ YAK G G + AR+IFD +
Sbjct: 219 SVGNTLLDAYAKGGE-------------------------------GGVAVARKIFDQIV 247
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP-NNYTLSAMLSVSSSLASLDHGK 432
D+D V++ +++ Y Q+G++ +A ++FR +++E N TLS +L S +L GK
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGK 307
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IH +R G + V ++I MY K G + AR F+ + + SWT+MI H
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G +A++LF M++ G++P++IT+V VL AC+H GL + G ++N MK ++P H
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEH 426
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+ MVDLLGRAG LQ+AY+ I+ M +EPD + W SLL+ACR+HKN++L +I+ +L ++
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P N G Y L ++Y+ G+W+D +R +MK G+ K GFS +++ +VHVF + D H
Sbjct: 487 PSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQR+ IY +A++ ++ E G+V +T+SV HDV+E+ KE LR HSEKLAIAFG+++T
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVP 606
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T+ ++KNLRVC+DCH+ IK I K+VDRE VVRDA RFHHFK G CSC DYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 226/523 (43%), Gaps = 95/523 (18%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F GK H + G +F+ ++L+ Y+ + A+KVFDE+P + + SW +++ Y
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G A +F +++ N+ + MF++ +
Sbjct: 153 DLNGNALDAVSLFK-----------DLLIEEND-----DDATMFLD---------SMGMV 187
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE--MMAKAVFDGMR 207
SV+++C+ + + +HSFV+K G V+V N+LL+ YAK G+ +A+ +FD +
Sbjct: 188 SVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K+ S+N ++S++ SG + A F ++I+ VVT+N +
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCI------------------- 288
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
TL++ L A ++ L++GK IH +IR + VG ++I Y K G
Sbjct: 289 ------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
VE AR FD +++++V +WTAM+ GY
Sbjct: 337 RVE---------------------------------TARLAFDRMKNKNVRSWTAMIAGY 363
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASS 446
+G A+ELF +M+ G +PN T ++L+ S D G +A R G
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPG 423
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L ++ + +AG + A + + +++ W+S++ A H E A R+
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 507 ELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKP 548
EL P + Y +L+ G + +R MKN +KP
Sbjct: 484 EL--DPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKP 524
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/646 (38%), Positives = 384/646 (59%), Gaps = 67/646 (10%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++ PT S++A+C +L+ + +H+ + ++ L+G + NSL++MY K G
Sbjct: 55 ELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCG----- 109
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
AV D AR FD+M RDVV+W +IAGY+QN
Sbjct: 110 -AVSD-------------------------ARHVFDKMPSRDVVSWTYLIAGYAQNYMPA 143
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EA+G+ +ML+ + +P+ FT S L A +G+Q+HA ++ +D VG+AL
Sbjct: 144 EAIGLLPDMLR-ARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSAL 202
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ YA+ EQ ++ + +FD L ++ V+
Sbjct: 203 LDMYARC----------EQMDMAIM-----------------------VFDRLVSKNEVS 229
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + + + F M R G ++T S+M S + + +L+ G+ +HA +
Sbjct: 230 WNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLI 289
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+SG+ + V N ++ MY+K+G++ AR+VF+ + +++ V+W +M+ ALAQ+GLG+EA+
Sbjct: 290 KSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALAQYGLGKEAV 348
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
FE + + GI+ + IT++ VLTAC+HGGLV++G+ Y++MMK+ + ++P H+ S VDL
Sbjct: 349 AHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDL 407
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGRAGLL+EA F+ MP+EP WG+LL ACR+HKN +G+ AA+ + ++PD++G
Sbjct: 408 LGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPP 467
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S GKW DAA +RK MK GVKK SWVQI+N VH+F +D HP+ IY
Sbjct: 468 VLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIY 527
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+I IK+ G+VP+TA VL + E +E L++HSEK+A+AF LI+ P ++RIM
Sbjct: 528 RMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIM 587
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KN+R+C DCHSA K++ K+ REIVVRD RFHHF +G CSC DYW
Sbjct: 588 KNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 180/420 (42%), Gaps = 96/420 (22%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
Y ++ + + +N + +HA + + L FL NSL++ Y K ++S A+ VFD+
Sbjct: 61 RLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDK 120
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
MP + + SW +++ YA+ N MP AI +
Sbjct: 121 MPSRDVVSWTYLIAGYAQ-----------NYMP--------------------AEAIGLL 149
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+M++ + P FT TS+L + A G S G+++H+ VK V V ++LL+MYA+
Sbjct: 150 PDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARC 209
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
MA VFD + KN S WN++IAG++
Sbjct: 210 EQMDMAIMVFDRLVSKNEVS-------------------------------WNALIAGFA 238
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+ L FA M ++ FT +S SA A + L+ G+ +HA++I++ T
Sbjct: 239 RKADGETTLMKFAEMQRN-GFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTA 297
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VGN ++ YAK G +++D AR++FD +
Sbjct: 298 FVGNTMLGMYAKSG-----------------------SMVD----------ARKVFDRMD 324
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
RD+V W ML Q GL K+AV F + + G + N T ++L+ S + GK
Sbjct: 325 KRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKH 384
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 38/326 (11%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++L L P S ++ACA + L + IHA++ R+ + N+LI Y K
Sbjct: 49 DLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKC 108
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G V A+ +FD + RDVV+WT ++ G
Sbjct: 109 GAVSDAR---------------------------------HVFDKMPSRDVVSWTYLIAG 135
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QN + +A+ L M+R +PN +T +++L + + G+Q+HA A++
Sbjct: 136 YAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDED 195
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V +AL+ MY++ ++ A VF+ + + E VSW ++I A+ GE + F M
Sbjct: 196 VYVGSALLDMYARCEQMDMAIMVFDRLVSKNE-VSWNALIAGFARKADGETTLMKFAEMQ 254
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G H TY + +A G +EQG+ + +++K+ K+ + +M+ + ++G
Sbjct: 255 RNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGN--TMLGMYAKSGS 312
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSA 591
+ +A + M + D+V W ++L+A
Sbjct: 313 MVDARKVFDRMD-KRDLVTWNTMLTA 337
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 141/294 (47%), Gaps = 39/294 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +K V++ ++L++ YA+ E + A VFD + K SWN +++ +A
Sbjct: 179 IGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFA 238
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
++ + TT++ F EM ++ T FT +S
Sbjct: 239 RKADGE-----------------TTLM--------------KFAEMQRNGFGATHFTYSS 267
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ ++ +G L G+ VH+ ++K+G V N++L MYAK G + A+ VFD M ++
Sbjct: 268 MFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRD 327
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+ +WN +++ G A A F+++ I+ + +T+ S++ S G E F
Sbjct: 328 LVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF- 386
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
+M+KD +++P+ + +S L + L K+ ++ + + T V AL+
Sbjct: 387 DMMKDYNVQPE---IDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 437
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/694 (37%), Positives = 406/694 (58%), Gaps = 43/694 (6%)
Query: 16 YAHLLQSNLKSRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
+A LL S +K + + + VHA +IK G VF++N L++ YAK S+ +++FD+M
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + +WN++++ K G LD A +F MP RD +W +++ + + R + A+ F
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M ++ + ++T S L++C+ L D++ G ++HS + K+ V + ++L++MY+K G
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCG 201
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ ++ A+ FD+M +R+VV+WNS+I Y Q
Sbjct: 202 N-------------------------------VNDAQQVFDEMGDRNVVSWNSLITCYEQ 230
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATG 313
NG EAL +F ML +S ++PD+ TLAS +SACA+L +K+G+++HA +++ +
Sbjct: 231 NGPAVEALKVFQVML-ESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDI 289
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ NA + YAK ++ A+ I + I NVIA T+++ GY AR +F +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIR--NVIAETSMVSGYAMAASTKAARLMFTKMA 347
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+R+VV+W A++ GY QNG N++A+ LF + RE P +YT + +L + LA L G Q
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQ 407
Query: 434 IHASALR------SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
H L+ SGE + V N+LI MY K G + VF + R + VSW +MI+
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMII 466
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQ+G G EA++LF ML+ G KPDHIT +GVL+AC H G VE+G+ Y++ M +
Sbjct: 467 GFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ MVDLLGRAG L+EA + IE MP++PD V WGSLL+AC+VH+N+ LGK AEK
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEK 586
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L +E NSG Y L N+Y+ GKW DA N+RK M+ GV K G SW++I HVF V
Sbjct: 587 LFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMV 646
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
+D HP++ I++ + + E+++ +T S+
Sbjct: 647 KDKSHPRKKQIHSLLDILIAEMRQKQDHAETGSL 680
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 261/751 (34%), Positives = 418/751 (55%), Gaps = 78/751 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA +IK L ++NSL++ Y K +I+ A+ VF + +L WN+++ Y++
Sbjct: 164 LHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYG 223
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
A VF MP RD VSW T+I +++ G + FVEM P T SVL++
Sbjct: 224 PYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSA 283
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C ++ DL G +H+ +++ S + + L++MYAK G
Sbjct: 284 CASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCG-------------------- 323
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
L LAR F+ + E++ V+W +I+G +Q G +AL +F N ++ +S+
Sbjct: 324 -----------CLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALF-NQMRQASV 371
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
D+FTLA+ L C+ G+ +H Y I++ D+ PVGNA+I+ YA+ G E A
Sbjct: 372 VLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASL 431
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + I++T ++ + + GDI AR+ FD + +R+V+ W +ML Y Q+G ++
Sbjct: 432 AFRSMPLR--DTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSE 489
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+ ++L+ M + KP+ T + + + LA++ G Q+ + + G +S +SV+N+++
Sbjct: 490 EGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIV 549
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
TMYS+ G I AR+VF+ IH + +SW +M+ A AQ+GLG +AI+ +E ML KPDH
Sbjct: 550 TMYSRCGQIKEARKVFDSIHVKN-LISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDH 608
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
I+YV VL+ DLLGRAGLL +A N I+
Sbjct: 609 ISYVAVLS-----------------------------------DLLGRAGLLDQAKNLID 633
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
MP +P+ WG+LL ACR+H + L + AA+KL+ + ++SG Y L N+Y+ G+ E+
Sbjct: 634 GMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELEN 693
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A++RK MK G++K+ G SW+++ N+VHVF V++ HPQ + +Y K+ ++ +I++ G
Sbjct: 694 VADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTGR 753
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
S H + ++HSEKLA AFGL+S P +++ KNLRVCNDCH IK
Sbjct: 754 YVSIVSCAHRSQ--------KYHSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVIKL 805
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + RE+++RD RFHHFK G CSCRDYW
Sbjct: 806 LSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 187/660 (28%), Positives = 319/660 (48%), Gaps = 84/660 (12%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P + + +HA++I GL S+FL N+L++ Y+ + A +VF E + +WNT+L
Sbjct: 19 SPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLH 78
Query: 88 AYAKQGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
A+ GR+ A +F+ MP+ RDSVSWTT+I Y + G ++I+ F+ M++D Q
Sbjct: 79 AFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQ 138
Query: 146 ----FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
F+ T + +C L ++H+ V+K L + NSL++MY K G +A+
Sbjct: 139 NCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAET 198
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VF + ++ WN ++ + A F +M ERD V+WN++I+ +SQ G+
Sbjct: 199 VFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRC 258
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L F M + KP+ T S LSACA++ LK G +HA I+R E +G+ LI
Sbjct: 259 LSTFVEMC-NLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLID 317
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G + +A+ R+F+SL +++ V+WT
Sbjct: 318 MYAKCGCLALAR---------------------------------RVFNSLGEQNQVSWT 344
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ G Q GL DA+ LF M + + +TL+ +L V S G+ +H A++S
Sbjct: 345 CLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKS 404
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S + V NA+ITMY++ G+ A F + R +T+SWT+MI A +Q+G + A Q
Sbjct: 405 GMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLR-DTISWTAMITAFSQNGDIDRARQC 463
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA------- 554
F+ M E + IT+ +L+ G E+G + Y +M++ +KP FA
Sbjct: 464 FDMMPERNV----ITWNSMLSTYIQHGFSEEGMKLYVLMRS-KAVKPDWVTFATSIRACA 518
Query: 555 ----------------------------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
S+V + R G ++EA +++ ++ ++++W
Sbjct: 519 DLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK-NLISWN 577
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIE--PDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
++++A + + E +L E PD+ + L +L G + A N+ M +
Sbjct: 578 AMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDLLGRAGLLDQAKNLIDGMPF 637
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 228/455 (50%), Gaps = 22/455 (4%)
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G +K+H+ ++ +GL + + N+LL+MY+ G A VF N+ +WN ++
Sbjct: 18 GSPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTML 77
Query: 219 SLHIHSGRLDLARAQFDQM--IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS--- 273
SGR+ A FD+M I RD V+W +MI+GY QNG ++ F +ML+DS+
Sbjct: 78 HAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDI 137
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
D F+ T+ AC L + Q+HA++I+ A + N+L+ Y K G + +A+
Sbjct: 138 QNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAE 197
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ I ++ + +++ GY ++ A +F + +RD V+W ++ + Q G
Sbjct: 198 TVFLN--IESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHG 255
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+ F M G KPN T ++LS +S++ L G +HA LR + + + L
Sbjct: 256 IRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGL 315
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K G + ARRVFN + Q VSWT +I +AQ GL ++A+ LF +M + + D
Sbjct: 316 IDMYAKCGCLALARRVFNSLG-EQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLD 374
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVH--KIKPTPSHFA----SMVDLLGRAGLLQ 567
T +L C+ GQ Y + +H IK F +++ + R G +
Sbjct: 375 EFTLATILGVCS-------GQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTE 427
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+A +MPL D ++W ++++A + ++D +
Sbjct: 428 KASLAFRSMPLR-DTISWTAMITAFSQNGDIDRAR 461
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/710 (36%), Positives = 420/710 (59%), Gaps = 19/710 (2%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++TL S N +L+ Y K +D A ++F+ +P R++ +WT +I ++ G + ++F E
Sbjct: 321 LQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFRE 380
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M P Q+T++S+ C+ +L GK VH+++++ G+ V + NS+L++Y K
Sbjct: 381 MRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKV 440
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF+ M +V SWN+++S ++ +G ++ + F ++ +DVV+WN+++ G Q
Sbjct: 441 FEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQF 500
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
GY+ +AL M+ + + T + L ++L ++LG+Q+H +++ F G +
Sbjct: 501 GYERQALEQLYCMV-ECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFI 559
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
++L+ Y K G ++ A +++ + +L K G+ G + +
Sbjct: 560 RSSLVEMYCKCGRMDNASIVLKDVPLDFL-------------KNGNAGVTCKELKA---- 602
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+V+W M+ GY NG +D ++ FR MVRE + T++ ++S ++ L+ G+ +H
Sbjct: 603 GIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVH 662
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A + G V ++LI MYSK+G+++ A +F + V WTSMI A HG G
Sbjct: 663 AYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTN-EPNIVFWTSMISGCALHGQG 721
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
++AI LFE ML GI P+ +T++GVL AC H GL+E+G RY+ MMK+ + I P H S
Sbjct: 722 KQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTS 781
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDL GRAG L E NFI + W S LS+CR+HKN+++GK +E LL + P +
Sbjct: 782 MVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSD 841
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
GAY L N+ +S +W++AA +R M G+KK G SW+Q+++++H F + D HPQ
Sbjct: 842 PGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQD 901
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ IY+ + + +KE+G+ D V+ DVEE+ E ++ HHSEKLA+ FG+I+T T
Sbjct: 902 EEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTP 961
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLR+C DCH+ IK+ +L+DREI++RD RFHHFK G CSC DYW
Sbjct: 962 IRIIKNLRICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 209/445 (46%), Gaps = 53/445 (11%)
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+H+ VK G +N N LL +Y K + A+ +FD + +N +W +++S
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILIS------- 363
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
G+S+ G +F M + P+++TL+S
Sbjct: 364 ------------------------GFSRAGSSEVVFKLFREMRAKGAC-PNQYTLSSLFK 398
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
C+ L+LGK +HA+++R DA +GN+++ Y K E A+++ E ++ +V
Sbjct: 399 CCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFEL--MNEGDV 456
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+++ ++ Y++ GD+ + +F L +DVV+W ++ G Q G + A+E MV
Sbjct: 457 VSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVEC 516
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G + + T S L +SSSL+ ++ G+Q+H L+ G + ++L+ MY K G ++ A
Sbjct: 517 GTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNA 576
Query: 467 RRVFNLI---------------HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
V + + VSW M+ +G E+ ++ F M+ +
Sbjct: 577 SIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVV 636
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNV-HKIKPTPSHFASMVDLLGRAGLLQEAY 570
D T +++AC + G++E G+ + + H+I +S++D+ ++G L +A+
Sbjct: 637 VDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVG--SSLIDMYSKSGSLDDAW 694
Query: 571 NFIENMPLEPDVVAWGSLLSACRVH 595
EP++V W S++S C +H
Sbjct: 695 TIFRQTN-EPNIVFWTSMISGCALH 718
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 231/524 (44%), Gaps = 54/524 (10%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VHA +++ G+ V L NS+++ Y K + YA++VF+ M + SWN ++SAY
Sbjct: 408 LGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYL 467
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G ++ + ++F +P +D VSW TI+ + G + A+ MV+ + T +
Sbjct: 468 RAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSI 527
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L ++L + G+++H V+K G + +SL+ MY K G A V + L
Sbjct: 528 ALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDF 587
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ + N V+ + ++ +V+W M++GY NG + L F M++
Sbjct: 588 LKNGNAGVTC---------------KELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVR 632
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ + D T+ + +SACAN L+ G+ +HAY + VG++LI Y+K G ++
Sbjct: 633 ELVV-VDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLD 691
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A I Q+ + ++V WT+M+ G +
Sbjct: 692 DAWTIFRQT---------------------------------NEPNIVFWTSMISGCALH 718
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G K A+ LF M+ +G PN T +L+ L+ G + + ++ + V
Sbjct: 719 GQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCR-YFRMMKDAYCINPGVE 777
Query: 451 N--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ +++ +Y +AG++ + T W S + + H E + E +L++
Sbjct: 778 HCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQV 837
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
D YV + C ++ R ++M IK P
Sbjct: 838 A-PSDPGAYVLLSNMCASNHRWDEAARVRSLMHQ-RGIKKQPGQ 879
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/703 (37%), Positives = 391/703 (55%), Gaps = 65/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++ YAK G L A +F+ M +RD V+W +I + G +A+++ ++M ++ +
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+ VL + L GK +H + V+ V V LL+MYAK + A+ +
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M + R+ V+W++MI GY + EAL
Sbjct: 268 FDVMGV-------------------------------RNEVSWSAMIGGYVXSDCMKEAL 296
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M+ ++ P TL S L ACA L L G+++H YII
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYII----------------- 339
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
K+G V L+++ TLL Y K G I A R FD + +D V+++A
Sbjct: 340 --KLGXV--------------LDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSA 383
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G QNG A+ +FR M G P+ T+ +L S LA+L HG H + G
Sbjct: 384 IVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG 443
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
A+ + NALI MYSK G I+ AR VFN + R + VSW +MI+ HGLG EA+ LF
Sbjct: 444 FATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHGLGMEALGLF 502
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+L LG+KPD IT++ +L++C+H GLV +G+ +++ M I P H MVD+LGR
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR 562
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AGL+ EA++FI NMP EPDV W +LLSACR+HKN++LG+ ++K+ + P+++G + L
Sbjct: 563 AGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLL 622
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+YS+ G+W+DAA+IR + K G+KK G SW++I VH F D H Q I K+
Sbjct: 623 SNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKL 682
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ E+K +G+ + + V DVEE+ KEQ+L +HSEKLAIAFG+++ + + KNL
Sbjct: 683 EELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNL 742
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCH+AIKF+ + REI VRDA RFHHFK G C+C D+W
Sbjct: 743 RVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 203/470 (43%), Gaps = 99/470 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++ V + L++ YAK + + YA+K+FD M V+ SW+ ++ Y
Sbjct: 229 GKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVX 288
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ A E+F+ M +++D + PT T+ SV
Sbjct: 289 SDCMKEALELFDQM------------------------------ILKDAMDPTPVTLGSV 318
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L DLS G+K+H +++K G + + N+LL+MYAK G + D +R
Sbjct: 319 LRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCG------VIDDAIRF--- 369
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
FD M +D V+++++++G QNG AL +F M++
Sbjct: 370 ----------------------FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF-RMMQL 406
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S + PD T+ L AC++L L+ G H Y+I F + NALI Y+K G +
Sbjct: 407 SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISF 466
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AR +F+ + D+V+W AM++GY +G
Sbjct: 467 ---------------------------------AREVFNRMDRHDIVSWNAMIIGYGIHG 493
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVS 450
L +A+ LF ++ G KP++ T +LS S + G+ + R +
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 553
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE 497
++ + +AG I+ A + + + W++++ A H LGEE
Sbjct: 554 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEE 603
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 203/415 (48%), Gaps = 45/415 (10%)
Query: 208 LKNVSSWNVVV-----SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LKN S+ + V L++ ++ LAR FD++ V+ WN +I Y+ NG A+
Sbjct: 35 LKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAI 94
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ +ML ++P+K+T L AC+ L ++ G +IH++
Sbjct: 95 DLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH------------------- 134
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
AK+ G+E +V T L+D Y K G + A+R+F S+ RDVVAW A
Sbjct: 135 -AKMFGLES-------------DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G GL DAV+L M EG PN+ T+ +L +L HGK +H +R
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + V L+ MY+K + AR++F+++ R E VSW++MI +EA++LF
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNE-VSWSAMIGGYVXSDCMKEALELF 299
Query: 503 ERM-LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
++M L+ + P +T VL AC + +G++ + + + + +++ +
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLG-NTLLSMYA 358
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN--LDLGKIAAEKLLLIEPD 614
+ G++ +A F + M D V++ +++S C + N + L +L I+PD
Sbjct: 359 KCGVIDDAIRFFDXMN-PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
NNY +L SL K+IH L++ + SV + L +Y + ARR+F
Sbjct: 9 NNYL--HLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ I + W +I A A +G + AI L+ ML LG++P+ TY VL AC+ +
Sbjct: 67 DEIP-NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
E G ++ K + ++ ++VD + G+L EA +M DVVAW ++++
Sbjct: 126 EDGVEIHSHAK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIA 183
Query: 591 ACRVHKNLD 599
C ++ D
Sbjct: 184 GCSLYGLCD 192
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/703 (37%), Positives = 392/703 (55%), Gaps = 67/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G +D A VF+ M +RD +SW ++ + G A +F++M Q+ ++
Sbjct: 462 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLV 521
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T S+L + + L +VH V+TGL V ++ ++MY
Sbjct: 522 PDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMY------------ 569
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
I G +D AR FD++ R V TWN+MI G +Q EAL
Sbjct: 570 -------------------IRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREAL 610
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + PD T + LSA + E L+ K++H++ VGNAL+
Sbjct: 611 SLFLQMQREGFI-PDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHT 668
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+K G V+ A +++FD + +R+V WT
Sbjct: 669 YSKCGNVKYA---------------------------------KQVFDDMVERNVTTWTM 695
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G Q+G DA F M+REG P+ T ++LS +S +L+ K++H A+ +G
Sbjct: 696 MIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAG 755
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S L V NAL+ MY+K G+I+ AR VF+ + R + SWT MI LAQHG G EA+ F
Sbjct: 756 LVSDLRVGNALVHMYAKCGSIDDARSVFDDMVER-DVFSWTVMIGGLAQHGRGLEALDFF 814
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M G KP+ +YV VLTAC+H GLV++G+R + M + I+PT H+ MVDLLGR
Sbjct: 815 VKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGR 874
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AGLL+EA FI NMP+EPD WG+LL AC + NL++ + AA++ L ++P ++ Y L
Sbjct: 875 AGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLL 934
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y++ GKWE +R M+ G++K G SW+++ N++H F V D HP+ IY ++
Sbjct: 935 SNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQL 994
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ + +K G+VPDT VL + +++ KEQ L HSEKLAI +GL+ T +R+ KNL
Sbjct: 995 NDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNL 1054
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC+DCH+A KFI K+ REIV RDA RFHHFK G+CSC DYW
Sbjct: 1055 RVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 244/514 (47%), Gaps = 101/514 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y ++LQ LK + + K VH IIK G+ ++++ N L+ Y +
Sbjct: 121 YVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRC-------------- 166
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
GRL A +VF+ + ++ WTT+I Y E G ++A+R++ +
Sbjct: 167 -----------------GRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK 209
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M Q+ P + T S+L +C +L GKK+H+ ++++G V V +L+NMY K G
Sbjct: 210 MRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS 269
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD M +NV SW V MI G +
Sbjct: 270 IEDAQLIFDKMVERNVISWTV-------------------------------MIGGLAHY 298
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA +F M ++ + P+ +T S L+A A+ L+ K++H++ + V
Sbjct: 299 GRGQEAFHLFLQMQREGFI-PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRV 357
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNAL+ YAK G ++ AR +FD + +R
Sbjct: 358 GNALVHMYAKSGSID---------------------------------DARVVFDGMTER 384
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS--SSLASLDHGKQ 433
D+ +WT M+ G Q+G ++A LF M R G PN T ++L+ S +S ++L+ K
Sbjct: 385 DIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKV 444
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H A +G S L + NALI MY+K G+I+ AR VF+ + R + +SW +M+ LAQ+G
Sbjct: 445 VHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDR-DVISWNAMMGGLAQNG 503
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
G EA +F +M + G+ PD TY+ +L THG
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLN--THG 535
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 183/661 (27%), Positives = 284/661 (42%), Gaps = 141/661 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA II+ G V ++ +L+N Y K SI A+ +FD+
Sbjct: 238 GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK------------------ 279
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
M R+ +SWT +I GR + A +F++M ++ +P +T S+
Sbjct: 280 -------------MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSI 326
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + + G L K+VHS V GL+ + V N+L++MYAK G A+ VFDGM +++
Sbjct: 327 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDI 386
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW V MI G +Q+G EA +F M ++
Sbjct: 387 FSWTV-------------------------------MIGGLAQHGRGQEAFSLFLQMQRN 415
Query: 272 SSLKPDKFTLASTL--SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
L P+ T S L SA A+ L+ K +H + F + +GNALI YAK G +
Sbjct: 416 GCL-PNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSI 474
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ AR +FD + DRDV++W AM+ G Q
Sbjct: 475 D---------------------------------DARLVFDGMCDRDVISWNAMMGGLAQ 501
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG +A +F M +EG P++ T ++L+ S +L+ ++H A+ +G S V
Sbjct: 502 NGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRV 561
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+A I MY + G+I+ AR +F+ + R T +W +MI AQ G EA+ LF +M G
Sbjct: 562 GSAFIHMYIRCGSIDDARLLFDKLSVRHVT-TWNAMIGGAAQQRCGREALSLFLQMQREG 620
Query: 510 IKPDHITYVGVLTA----------------CTHGGLVEQ--GQRYYNMMKNVHKIKPTPS 551
PD T++ +L+A T GLV+ G + +K
Sbjct: 621 FIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQ 680
Query: 552 HFASMVDL-----------LGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKN 597
F MV+ L + G +A++ M E PD + S+LSAC
Sbjct: 681 VFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGA 740
Query: 598 LDLGKIAAEKLL---LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
L+ K + L+ G +AL ++Y+ CG +DA ++ M V FS
Sbjct: 741 LEWVKEVHNHAVSAGLVSDLRVG--NALVHMYAKCGSIDDARSVFDDMVERDV-----FS 793
Query: 655 W 655
W
Sbjct: 794 W 794
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 162/618 (26%), Positives = 278/618 (44%), Gaps = 106/618 (17%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
K+A+ M VQ + F+ ++L C D+ K+VH ++K+G+ + V N L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
L +Y + G A+ VFD + KN+ W
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIW-------------------------------T 188
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MI GY++ G+ +A+ ++ M ++ +P++ T S L AC LK GK+IHA+II+
Sbjct: 189 TMIGGYAEYGHAEDAMRVYDKMRQECG-QPNEITYLSILKACCCPVNLKWGKKIHAHIIQ 247
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ F + V AL++ Y K G +E AQ
Sbjct: 248 SGFQSDVRVETALVNMYVKCGSIEDAQ--------------------------------- 274
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
IFD + +R+V++WT M+ G G ++A LF M REG PN+YT ++L+ ++S
Sbjct: 275 LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAG 334
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+L+ K++H+ A+ +G A L V NAL+ MY+K+G+I+ AR VF+ + R + SWT MI
Sbjct: 335 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTER-DIFSWTVMI 393
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
LAQHG G+EA LF +M G P+ TY+ +L A +K VHK
Sbjct: 394 GGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIA-----STSALEWVKVVHKH 448
Query: 547 KPTPSHFA------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL-----SACRVH 595
+ +++ + + G + +A + M + DV++W +++ + C
Sbjct: 449 AEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMMGGLAQNGCGHE 507
Query: 596 KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV----KKTQ 651
++ E L+ PD S Y +L N + S E + K G+ +
Sbjct: 508 AFTVFLQMQQEGLV---PD-STTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGS 563
Query: 652 GFSWVQIQ-----------NKVHVFGVEDWLHPQRDAIYNKMAK----IWDEIKEMGFVP 696
F + I+ +K+ V V W A + + ++ +++ GF+P
Sbjct: 564 AFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIP 623
Query: 697 DTASVLHDVEEDVKEQML 714
D + ++ + +V E+ L
Sbjct: 624 DATTFINILSANVDEEAL 641
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VH + GL + + N+L++ YAK SI A+ VFD+M + + SW ++ A+
Sbjct: 745 KEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQH 804
Query: 93 GRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPT 144
GR A + F M + + S+ ++ + G R F+ M QD + PT
Sbjct: 805 GRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPT 861
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/707 (35%), Positives = 416/707 (58%), Gaps = 71/707 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK G ++ AC VF LM N+DSV+W ++I ++ +F A++ F EM + ++
Sbjct: 428 NGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELY 487
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P+ FT+ S L+SC +LG +S G+++H +K GL V+V+N+LL +Y +
Sbjct: 488 PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGEC--------- 538
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEA 261
G + + F M++ D V+WNS+I + + EA
Sbjct: 539 ----------------------GYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEA 576
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ F M++ + P++ T + L+A ++L +LGKQIHA +++ A + NAL++
Sbjct: 577 VESFLVMMR-AGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLA 635
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAW 380
CY K GD+G IF + DR D V+W
Sbjct: 636 CYGKC---------------------------------GDMGYCENIFSRMSDRQDEVSW 662
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+M+ GY N L A+++ M+++G + + +T + +LS +++A+L+ G ++H ++R
Sbjct: 663 NSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVR 722
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+ S + + +AL+ MY+K G I+ A R F ++ R SW SMI A+HG G +++
Sbjct: 723 ACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARN-LYSWNSMISGYARHGHGTKSLD 781
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF +M G PDH+T+VGVL+AC+H GLV +G +++ M ++ + P HF+ MVDLL
Sbjct: 782 LFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLL 841
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CRVH-KNLDLGKIAAEKLLLIEPDNSGA 618
GR G L + +F+ MP++P+V+ W ++L A CR + +N LG+ AAE LL +EP N+
Sbjct: 842 GRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVN 901
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N+Y+S GKW+D A R +M+ VKK G SWV +++ VHVF D HP++D I
Sbjct: 902 YILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLI 961
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y K+ ++ +++ G++P+T L+D+E + KE++L +HSEK+A+AF +++ P +RI
Sbjct: 962 YEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRI 1020
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLRVC DCHSA K+I ++V+R+IV+RD+ RFHHF+ G CSC D+W
Sbjct: 1021 LKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 172/691 (24%), Positives = 288/691 (41%), Gaps = 157/691 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPF-----VGKLVHARIIKCG------LHLSVFLKN 52
P PPS I PL+ L +S+ NP + L CG LHL +F KN
Sbjct: 45 PLPPSSI-PLQVLVDLYKSSQLHHNPVQHDEKIESLAQRYRYSCGSKDAEELHLQLF-KN 102
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+N +F LC NT+++ YA+ G L +VF+ MP R+ VS
Sbjct: 103 GFVN------------DLF-------LC--NTLINIYARVGDLGSGRKVFDEMPLRNLVS 141
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD--LSAGKKVHSF 170
W+ +I Y A +F +MV D +P + SV+ +C G+ L G ++H
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGL 201
Query: 171 VVKTGLSGCVNVTN--------------------------------SLLNMYAKVGDEMM 198
+ KT V +N S++++Y + GD +
Sbjct: 202 MSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS 261
Query: 199 AKAVF---------DGMR------------------------------------LKNVSS 213
A +F DG++ L ++
Sbjct: 262 AFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYV 321
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
+ +VS +G + A+ F +M R+VV+ N +I G + EA+ +F M
Sbjct: 322 GSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVE 381
Query: 274 LKPDKFTLASTLSACANLEKLKLGK----QIHAYIIRTEF-DATGPVGNALISCYAKVGG 328
L P+ + + L+A L+ GK ++HA++IR+ +A +GN LI+ YAK G
Sbjct: 382 LNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGA 439
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
I A +F + ++D V W +M+ G +
Sbjct: 440 ---------------------------------INDACVVFRLMDNKDSVTWNSMITGLD 466
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QN +AV+ F+ M R P+N+T+ + LS +SL + G+Q+H L+ G +S
Sbjct: 467 QNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVS 526
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE-EAIQLFERMLE 507
VSNAL+ +Y + G + ++ F+L+ + VSW S+I ALA EA++ F M+
Sbjct: 527 VSNALLALYGECGYVKECQKAFSLM-LDYDHVSWNSLIGALADSEPSMLEAVESFLVMMR 585
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G P+ +T++ +L A + L E G++ + ++ + T A ++ G+ G +
Sbjct: 586 AGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENA-LLACYGKCGDMG 644
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
N M D V+W S++S +H L
Sbjct: 645 YCENIFSRMSDRQDEVSWNSMISG-YIHNEL 674
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 62/260 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +HA ++K + ++N+L+ Y K + Y + +F M +
Sbjct: 610 LGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDR------------- 656
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+D VSW ++I Y A+ M M+Q FT +
Sbjct: 657 -----------------QDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFAT 699
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C + L G +VH V+ L + + ++L++MYAK G A F+ M +N
Sbjct: 700 VLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARN 759
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ SW NSMI+GY+++G+ ++L +FA M
Sbjct: 760 LYSW-------------------------------NSMISGYARHGHGTKSLDLFAQMKL 788
Query: 271 DSSLKPDKFTLASTLSACAN 290
L PD T LSAC++
Sbjct: 789 QGPL-PDHVTFVGVLSACSH 807
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++ L + + ++L++ YAK I YA + F+ MP + L SWN+++S YA+
Sbjct: 713 GMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYAR 772
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++ +F +M LP T V
Sbjct: 773 H-------------------------------GHGTKSLDLFAQMKLQGPLPDHVTFVGV 801
Query: 152 LASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L++C+ G ++ G S GL+ + + ++++ +VG+ + + M +K
Sbjct: 802 LSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKP 861
Query: 210 NVSSWNVVV 218
NV W V+
Sbjct: 862 NVLIWRTVL 870
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/704 (36%), Positives = 404/704 (57%), Gaps = 74/704 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ ++ A+ G L A +VF+ + + V WT +I Y + + A+ +F++ ++D
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFE 251
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++T++S++++CT LG + G ++HS ++ G + V+ L++MYAK E
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQA---- 307
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY-DFEA 261
+D A F++M + DV++W ++I+GY Q+G + +
Sbjct: 308 ------------------------MDYANKVFERMRKNDVISWTALISGYVQSGVQENKV 343
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F ML +S +KP+ T +S L ACAN+ G+Q+HA++I++ A VGNAL+S
Sbjct: 344 MVLFGEMLNES-IKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVS 402
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YA+ G +E ARR+F+ L +R +++
Sbjct: 403 MYAESGCME---------------------------------EARRVFNQLYERSMISCI 429
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+DA L + R ++ T ++++S ++S+ L G+Q+HA L++
Sbjct: 430 TE---------GRDA-PLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKA 479
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S VSN+L++MYS+ G + A R FN + R +SWTSMI LA+HG E A+ L
Sbjct: 480 GFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRN-VISWTSMISGLAKHGYAERALSL 538
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F M+ G+KP+ +TY+ VL+AC+H GLV +G+ Y+ M+ H + P H+A MVDLL
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R+GL++EA FI MPL+ D + W +LL ACR H N+++G+IAA+ ++ +EP + Y
Sbjct: 599 RSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVL 658
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY+ G W++ A IR +M+ + K G SW++++N H F D HP+ IY K
Sbjct: 659 LSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGK 718
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + EIK MG+VPDT+ VLHD+ +++KEQ L HSEK+A+AFGLI+T +RI KN
Sbjct: 719 LDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKN 778
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCHSAIK++ K REI++RD+ RFH K G CSC +YW
Sbjct: 779 LRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 255/548 (46%), Gaps = 112/548 (20%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPN-RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
N++L+ Y++ G + A VF+ M RD VSWT + G + ++ + EM++ +
Sbjct: 88 NSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGL 147
Query: 142 LPTQFTVTSVLASC-----TALGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGD 195
LP +T+ +V +C L VH K GL G + V ++L++M A+ GD
Sbjct: 148 LPNAYTLCAVAHACFPHELYCLVGGVVLGLVH----KMGLWGTDIAVGSALIDMLARNGD 203
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
L AR FD +IE+ VV W +I+ Y Q
Sbjct: 204 -------------------------------LASARKVFDGLIEKTVVVWTLLISRYVQG 232
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EA+ +F + L+D +PD++T++S +SAC L ++LG Q+H+ +R F + V
Sbjct: 233 ECAEEAVEIFLDFLED-GFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACV 291
Query: 316 GNALISCYAKVG---GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
L+ YAK ++ A K+ E+ + +VI++T L+ GY+
Sbjct: 292 SCGLVDMYAKSNIEQAMDYANKVFER--MRKNDVISWTALISGYV--------------- 334
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVE-LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
Q+G+ ++ V LF M+ E KPN+ T S++L ++++ D G
Sbjct: 335 ----------------QSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSG 378
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ-------------- 477
+Q+HA ++S +A++ +V NAL++MY+++G + ARRVFN ++ R
Sbjct: 379 RQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLD 438
Query: 478 ----------ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+ ++ S+I A A G+ + QL L+ G D +++ +
Sbjct: 439 HRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRC 498
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL---EPDVVA 584
G +E R +N +K+ + I T SM+ L + G + A + +M L +P+ V
Sbjct: 499 GYLEDACRSFNELKDRNVISWT-----SMISGLAKHGYAERALSLFHDMILTGVKPNDVT 553
Query: 585 WGSLLSAC 592
+ ++LSAC
Sbjct: 554 YIAVLSAC 561
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 199/418 (47%), Gaps = 73/418 (17%)
Query: 159 GDLSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
GDL G+ +H +++ L V NSLL +Y++ G A+ VFDGMR
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGL-------- 113
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
RD+V+W +M + ++NG + E+L + ML +S L P+
Sbjct: 114 ----------------------RDIVSWTAMASCLARNGAERESLLLIGEML-ESGLLPN 150
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+TL + AC E + C + + K+
Sbjct: 151 AYTLCAVAHACFPHE---------------------------LYCLVGGVVLGLVHKM-- 181
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
G+ ++ + L+D + GD+ AR++FD L ++ VV WT ++ Y Q ++AV
Sbjct: 182 --GLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
E+F + +G +P+ YT+S+M+S + L S+ G Q+H+ ALR G AS VS L+ MY
Sbjct: 240 EIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMY 299
Query: 458 SKAG---NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ-LFERMLELGIKPD 513
+K+ ++ A +VF + + + +SWT++I Q G+ E + LF ML IKP+
Sbjct: 300 AKSNIEQAMDYANKVFERMR-KNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPN 358
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEA 569
HITY +L AC + + G++ + +V K +H ++V + +G ++EA
Sbjct: 359 HITYSSILKACANISDHDSGRQVH---AHVIKSNQAAAHTVGNALVSMYAESGCMEEA 413
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 129/542 (23%), Positives = 228/542 (42%), Gaps = 146/542 (26%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILS 87
+G +H+ ++ G + L++ YAK+ +++ YA KVF+ M + SW ++S
Sbjct: 272 LGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALIS 331
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
Y + G V N++ + +F EM+ + + P T
Sbjct: 332 GYVQSG------------------------VQENKV------MVLFGEMLNESIKPNHIT 361
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S+L +C + D +G++VH+ V+K+ + V N+L++MYA+
Sbjct: 362 YSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAE--------------- 406
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
SG ++ AR F+Q+ ER SMI+ ++ G D
Sbjct: 407 ----------------SGCMEEARRVFNQLYER------SMISCITE-GRDAPLDHRIGR 443
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + T AS +SA A++ L G+Q+HA ++ F + V N+L+S Y++ G
Sbjct: 444 M----DMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCG 499
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A + + L+DR+V++WT+M+ G
Sbjct: 500 YLEDACRSFNE---------------------------------LKDRNVISWTSMISGL 526
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
++G + A+ LF M+ G KPN+ T A+LS S + + GK+ S R
Sbjct: 527 AKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR------- 579
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ LI R E + M+ LA+ GL +EA++ E
Sbjct: 580 --DHGLIP--------------------RME--HYACMVDLLARSGLVKEALEFIN---E 612
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP-TPSHFASMVDLLGRAGLL 566
+ +K D + + +L AC +E G+ KNV +++P P+ + + +L AGL
Sbjct: 613 MPLKADALVWKTLLGACRSHDNIEVGE---IAAKNVIELEPRDPAPYVLLSNLYADAGLW 669
Query: 567 QE 568
E
Sbjct: 670 DE 671
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/779 (35%), Positives = 433/779 (55%), Gaps = 104/779 (13%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
I + Y+ L+Q + ++ + + +K G H S L N L++ Y K S+ YA+K
Sbjct: 74 IQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARK 131
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFDE+P + + +WN+++++Y + GR K A
Sbjct: 132 VFDEVPHRHIVAWNSMIASYIRN-------------------------------GRSKEA 160
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH--SFVVKTGLSGCVNVTNSLL 187
I ++ MV D +LP +FT +SV + + LG + G++ H S V+ G+S V V ++L+
Sbjct: 161 IDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSN-VFVGSALV 219
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+MYAK G++ AR DQ++ +DVV + +
Sbjct: 220 DMYAKF-------------------------------GKMRDARLVSDQVVGKDVVLFTA 248
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+I GYS +G D E+L +F NM K ++ +++TL+S L C NLE L G+ IH I++
Sbjct: 249 LIVGYSHHGEDGESLQVFRNMTK-KGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKA 307
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
++ +L++ Y + G V+ + K+ +Q I P +
Sbjct: 308 GLESAVASQTSLLTMYYRCGLVDDSLKVFKQF----------------------INPNQ- 344
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
V WT+++VG QNG + A+ FR M+R PN++TLS++L SSLA
Sbjct: 345 ----------VTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAM 394
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ GKQIHA ++ G V ALI Y K G+ AR VFN + + VS SMI
Sbjct: 395 LEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL-LEVDVVSVNSMIY 453
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
+ AQ+G G EA+QLF M + G++P+++T++GVL+AC + GL+E+G ++ +N I+
Sbjct: 454 SYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIE 513
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
T H+A MVDLLGRAG L+EA I + + DVV W +LLSACR+H ++++ K +
Sbjct: 514 LTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNR 572
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
++ + P++ G + L NLY+S G W ++ +M+ + +KK SWV ++ ++H F
Sbjct: 573 VIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMA 632
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
DW HP I K+ ++ +++KE+G+VPDT VL D++E+ K + L +HSEKLA+AF L
Sbjct: 633 GDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFAL 692
Query: 728 -ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
S +NTT+RI+KNLRVC DCH+ +KF+ K+V R+I+ RD RFHHF+ GLCSC DYW
Sbjct: 693 WRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/704 (35%), Positives = 410/704 (58%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK GR++ A VF M RD VSW T++ + +++A+ F +M
Sbjct: 287 NALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQK 346
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P Q +V +++A+ G+L GK+VH++ ++ GL + + N+L++MYAK
Sbjct: 347 PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKC--------- 397
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
V H G F+ M E+D+++W ++IAGY+QN EA+
Sbjct: 398 -------------CCVK---HMGY------AFECMHEKDLISWTTIIAGYAQNECHLEAI 435
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ++ + D + S L AC+ L+ ++IH Y+ + + A + NA+++
Sbjct: 436 NLFRK-VQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNV 493
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y +VG + A RR F+S+R +D+V+WT+
Sbjct: 494 YGEVGHRDYA---------------------------------RRAFESIRSKDIVSWTS 520
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ NGL +A+ELF S+ + +P++ + + LS +++L+SL GK+IH +R G
Sbjct: 521 MITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKG 580
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++++L+ MY+ G + +R++F+ + R + + WTSMI A HG G EAI LF
Sbjct: 581 FFLEGPIASSLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMINANGMHGCGNEAIALF 639
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + + PDHIT++ +L AC+H GL+ +G+R++ +MK ++++P P H+A MVDLL R
Sbjct: 640 KKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSR 699
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+ L+EAY F+ +MP++P W +LL AC +H N +LG++AA++LL + NSG Y+ +
Sbjct: 700 SNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALI 759
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N++++ G+W D +R MK G+KK G SW+++ NK+H F D HPQ D IY K+
Sbjct: 760 SNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKL 819
Query: 683 AKIWDEI-KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
A+ + K+ G++ T V H+V E+ K QML HSE+LA+ +GL+ TP+ T++RI KN
Sbjct: 820 AQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKN 879
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C+DCH+ K ++ R +VVRDA RFHHF++GLCSC D+W
Sbjct: 880 LRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 163/599 (27%), Positives = 263/599 (43%), Gaps = 114/599 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HAR++K HLS FL L++ Y K
Sbjct: 65 GQQLHARLLKS--HLSAFLATKLLHMYEKC------------------------------ 92
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L A +VF+ M R +W ++ + G++ AI ++ EM V T SV
Sbjct: 93 -GSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSV 151
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C ALG+ G ++H VK G V V N+L+ MY K GD A+ +FDG+
Sbjct: 152 LKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGI----- 206
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
M + D V+WNS+I+ + G EAL +F M ++
Sbjct: 207 ------------------------MMEKEDTVSWNSIISAHVTEGKCLEALSLFRRM-QE 241
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ + +T + L + +KLG IH +++ A V NALI+ YAK G +E
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRME- 300
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A R+F S+ RD V+W +L G QN
Sbjct: 301 --------------------------------DAERVFASMLCRDYVSWNTLLSGLVQNE 328
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L +DA+ FR M KP+ ++ +++ S +L +GK++HA A+R+G S++ + N
Sbjct: 329 LYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGN 388
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI MY+K + F +H ++ +SWT++I AQ+ EAI LF ++ G+
Sbjct: 389 TLIDMYAKCCCVKHMGYAFECMH-EKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMD 447
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK--IKPTPSHFA---SMVDLLGRAGLL 566
D + VL AC+ G + N ++ +H K + ++V++ G G
Sbjct: 448 VDPMMIGSVLRACS-------GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHR 500
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA---AEKLLLIEPDNSGAYSAL 622
A E++ D+V+W S+++ C VH L + + + K I+PD+ SAL
Sbjct: 501 DYARRAFESIR-SKDIVSWTSMITCC-VHNGLPVEALELFYSLKQTNIQPDSIAIISAL 557
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 191/432 (44%), Gaps = 101/432 (23%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
+ P +S L +L+ ++ +S N GK VHA I+ GL ++ + N+L++ YAK
Sbjct: 343 SAQKPDQVSVL----NLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCC 398
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ + F+ M K L SW TI++ YA+ C +
Sbjct: 399 CVKHMGYAFECMHEKDLISWTTIIAGYAQN-----ECHL--------------------- 432
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
AI +F ++ + + SVL +C+ L + +++H +V K L+ + +
Sbjct: 433 -----EAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD-IML 486
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N+++N+Y +VG A+ F+ +R K++ SW +++ +H
Sbjct: 487 QNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVH------------------- 527
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
NG EAL +F + LK ++++PD + S LSA ANL LK GK+IH
Sbjct: 528 ------------NGLPVEALELFYS-LKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++IR F GP+ ++L+ YA G VE
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVE-------------------------------- 602
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
+R++F S++ RD++ WT+M+ +G +A+ LF+ M E P++ T A+L
Sbjct: 603 -NSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYAC 661
Query: 423 SSLASLDHGKQI 434
S + GK+
Sbjct: 662 SHSGLMVEGKRF 673
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 13/189 (6%)
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P + S +L + ++ +L G+Q+HA L+S ++ L+ L+ MY K G++ A
Sbjct: 42 PSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSAFLATK--LLHMYEKCGSLKDAV 99
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+VF+ + R +W +M+ A G EAI+L++ M LG+ D T+ VL AC
Sbjct: 100 KVFDEMTERT-IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGAL 158
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFA----SMVDLLGRAGLLQEAYNFIENMPLE-PDV 582
G G + + +K F +++ + G+ G L A + + +E D
Sbjct: 159 GESRLGAEIHGV-----AVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDT 213
Query: 583 VAWGSLLSA 591
V+W S++SA
Sbjct: 214 VSWNSIISA 222
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 280/760 (36%), Positives = 412/760 (54%), Gaps = 103/760 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +IK V + NSLMN Y+K + A+K
Sbjct: 912 LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT-------------------- 951
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
F P D +SW T+I +Y + AI F ++++D + P QFT+ S
Sbjct: 952 -----------FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLAS 1000
Query: 151 VLASCTALGD----LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
VL +C+ GD + G +VH + +K G+ V+ +L+++Y+K G M +A F
Sbjct: 1001 VLRACST-GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK--MDEAEF--- 1054
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
LH G+ D D+ +WN+++ GY ++ +AL F+
Sbjct: 1055 ------------LLH---GKYDF-----------DLASWNAIMFGYIKSNKSRKALEHFS 1088
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++ + + D+ TLA+ + A L LK GKQI AY I+ F+
Sbjct: 1089 -LMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN---------------- 1131
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+ SG+ LD YIK GD+ A +F + D VAWT M+ G
Sbjct: 1132 ------NDLWVSSGV-----------LDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y +NG A+ ++ M G +P+ YT + ++ SS L +L+ GKQIHA+ ++ +
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V +L+ MY K G++ A RVF + R+ V W +M++ LAQHG +EA+ LF M
Sbjct: 1235 HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
GI+PD +T++GVL+AC+H GL + +Y++ M + I P H++ +VD LGRAG +
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
QEA N I +MP + + +LL ACR + + K A+KLL ++P +S AY L N+Y
Sbjct: 1354 QEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIY 1413
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ +W+D + R MK VKK GFSW+ ++NKVH+F V+D HPQ IY K+ +
Sbjct: 1414 AASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLM 1473
Query: 687 DEIKEMG-FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
I+E G +VPDT L DVEE+ KE+ L +HSEKLAIAFGLISTP + T+R++KNLRVC
Sbjct: 1474 KRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVC 1533
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHSAIK I KL REIV+RDA RFHHF+ G CSC DYW
Sbjct: 1534 GDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 157/620 (25%), Positives = 266/620 (42%), Gaps = 133/620 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK HARI+ G +L N+L+ Y+K S+ A++VFD+ + L +WN+IL+AYA
Sbjct: 629 LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ DS S+ ++ R+F + + T+ T+
Sbjct: 689 QFA---------------DS-SYENVL----------EGFRLFGLLREFGFSITRLTLAP 722
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L C G + + VH + VK G + V+ +L+N+Y K G A+ +FD M ++
Sbjct: 723 LLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFD----------------------------------- 235
WNV++ ++ + D A F
Sbjct: 783 AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQ 842
Query: 236 ------QMIERD----VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
+M D + WN + + G A+ F +L+ S++ D TL L
Sbjct: 843 VKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR-STIGHDSVTLVIIL 901
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SA + L LG+QIHA +I++ F PV N+L++ Y+K G V A+K
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK----------- 950
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
F + + D+++W M+ Y QN L +A+ FR ++R
Sbjct: 951 ----------------------TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDH---GKQIHASALRSGEASSLSVSNALITMYSKAGN 462
+G KP+ +TL+++L S+ ++ G Q+H A++ G + VS ALI +YSK G
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 463 INAARRVFNLIHWRQ--ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
++ A L+H + + SW +++ + +A++ F M E+GI D IT
Sbjct: 1049 MDEAEF---LLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATA 1105
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP--L 578
+ A G L+ +K +I+ DL +G+L + Y +MP L
Sbjct: 1106 IKAS--GCLIN--------LKQGKQIQAYAIKLGFNNDLWVSSGVL-DMYIKCGDMPNAL 1154
Query: 579 E-------PDVVAWGSLLSA 591
E PD VAW +++S
Sbjct: 1155 ELFGEISRPDEVAWTTMISG 1174
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 221/492 (44%), Gaps = 96/492 (19%)
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
S A+ DL GK+ H+ +V +G +TN+L+ MY+K G
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGS------------------ 661
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ---NGYD--FEALGMFANM 268
L AR FD+ +RD+VTWNS++A Y+Q + Y+ E +F +
Sbjct: 662 -------------LCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFG-L 707
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L++ + TLA L C +++ + +H Y ++ F+ V AL++ Y K G
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIK-----------------------------I 359
V A+ + ++ + + + + +L Y++ I
Sbjct: 768 VGQARLLFDK--MPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVI 825
Query: 360 GDIGP----------------ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
G + A ++F + ++ AW L + G A++ F+++
Sbjct: 826 GGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
+R ++ TL +LS + LD G+QIHA ++S A + VSN+L+ MYSKAG +
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
AA + F + + +SW +MI + AQ+ L EAI F +L G+KPD T VL A
Sbjct: 946 YAAEKTF-INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Query: 524 CTHGGLVEQGQRYYNMMKNVH----KIKPTPSHFAS--MVDLLGRAGLLQEAYNFIENMP 577
C+ G ++G+ Y+ + VH K F S ++DL + G + EA F+ +
Sbjct: 1005 CSTG---DEGE-YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGK 1059
Query: 578 LEPDVVAWGSLL 589
+ D+ +W +++
Sbjct: 1060 YDFDLASWNAIM 1071
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
++A L GK+ HA + SG+ ++N LITMYSK G++ +AR+VF+ R + V+W
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR-DLVTWN 681
Query: 484 SMIVALAQHGLGE-----EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
S++ A AQ E +LF + E G +T +L C G V+ + +
Sbjct: 682 SILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHG 741
Query: 539 MMKNVHKIKPTPSHFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
KI F S +V++ + GL+ +A + MP E D V W +L A
Sbjct: 742 YAV---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/512 (45%), Positives = 342/512 (66%), Gaps = 3/512 (0%)
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+KP++FTL++ + ACA++ L+ GKQ H YII+ F++ V AL+ YA+ G +E A
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ ++ +S + + ++ G+ + D+ A ++F + +RDVV+WTA++ GY QNG
Sbjct: 66 HVFDK--MSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+++ +F M + G K + + + ++LS + LA+L+ G+Q HA ++SG A + V +AL
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ MY+K+G++ A +VF+ + R E VSW S+I AQHG G +A+ LFE+ML+ GIKP+
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNE-VSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
I++VGVL+AC+H GLV +G+ Y+N+M + I P SH+ M+DLLGRAG L EA NFI
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
MP+EPDV WG+LL ACR+H N +L K AE LL +E +G Y L N+Y++ G+W+
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWD 362
Query: 634 DAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMG 693
DAA +RK MK GV K G+SW++++ +H F + HPQ I+ + + ++K G
Sbjct: 363 DAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAG 422
Query: 694 FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIK 753
+VP+ VL DVE+D KE L HHSEKLAIAFG+I+T TT+R+ KNLRVC DCH+ IK
Sbjct: 423 YVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIK 482
Query: 754 FICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
FI R+IVVRDA RFHHFK G CSC DYW
Sbjct: 483 FISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 197/377 (52%), Gaps = 35/377 (9%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
MV V P QFT+++V+ +C ++ L GK+ H++++K G V V +L++MYA+ G
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A VFD M ++ +WN +++ H + + A F +M ERDVV+W ++IAGY+QN
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
GY E+L +F N ++ + +K D+F + S LSACA+L L+LG+Q HAY++++ F V
Sbjct: 121 GYGDESLNVF-NQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G+AL+ YAK G +E A ++FD + R
Sbjct: 180 GSALVDMYAKSGSME---------------------------------DACQVFDKMPQR 206
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK-QI 434
+ V+W +++ G Q+G DAV LF M++ G KPN + +LS S ++ G+
Sbjct: 207 NEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYF 266
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+ G +S +I + +AG ++ A N + + W +++ A HG
Sbjct: 267 NLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGN 326
Query: 495 GEEAIQLFERMLELGIK 511
E A ++ E +L + ++
Sbjct: 327 TELAKRIAEHLLGMEVQ 343
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 173/354 (48%), Gaps = 12/354 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK H IIK G V ++ +L++ YA+ S+ A VFD+M ++ +WN +++ +A+
Sbjct: 29 GKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQ 88
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ A ++F M RD VSWT +I Y + G ++ +F +M + + +F + SV
Sbjct: 89 NRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSV 148
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C L L G++ H++VV++G + + V ++L++MYAK G A VFD M +N
Sbjct: 149 LSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNE 208
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
SWN +++ GR + A F+QM++ + +++ +++ S G E G F
Sbjct: 209 VSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNL 268
Query: 268 MLKDSSLKPD--KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M ++ + PD +T L L + + +I + V AL+
Sbjct: 269 MTQNYGIVPDVSHYTCMIDL-----LGRAGCLDEAENFINGMPVEPDVSVWGALLGACRI 323
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDG-YIKIGDIGPARRIFDSLRDRDVV 378
G E+A++I E + + LL Y G A ++ ++DR V+
Sbjct: 324 HGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVM 377
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ HA +++ G L + + ++L++ YAK+ S+ A +VFD+MP + SWN+I++ A
Sbjct: 160 LGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCA 219
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ GR + +A+ +F +M+Q + P + +
Sbjct: 220 QHGRGN-------------------------------DAVLLFEQMLQAGIKPNEISFVG 248
Query: 151 VLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL++C+ G ++ G+ + + + G+ V+ ++++ + G A+ +GM ++
Sbjct: 249 VLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVE 308
Query: 210 -NVSSWNVVV-SLHIHSGRLDLARAQFDQMIERDV 242
+VS W ++ + IH G +LA+ + ++ +V
Sbjct: 309 PDVSVWGALLGACRIH-GNTELAKRIAEHLLGMEV 342
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 280/760 (36%), Positives = 412/760 (54%), Gaps = 103/760 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +IK V + NSLMN Y+K + A+K
Sbjct: 912 LGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKT-------------------- 951
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
F P D +SW T+I +Y + AI F ++++D + P QFT+ S
Sbjct: 952 -----------FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLAS 1000
Query: 151 VLASCTALGD----LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
VL +C+ GD + G +VH + +K G+ V+ +L+++Y+K G M +A F
Sbjct: 1001 VLRACST-GDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK--MDEAEF--- 1054
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
LH G+ D D+ +WN+++ GY ++ +AL F+
Sbjct: 1055 ------------LLH---GKYDF-----------DLASWNAIMFGYIKSNKSRKALEHFS 1088
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++ + + D+ TLA+ + A L LK GKQI AY I+ F+
Sbjct: 1089 -LMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN---------------- 1131
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+ SG+ LD YIK GD+ A +F + D VAWT M+ G
Sbjct: 1132 ------NDLWVSSGV-----------LDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y +NG A+ ++ M G +P+ YT + ++ SS L +L+ GKQIHA+ ++ +
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLD 1234
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V +L+ MY K G++ A RVF + R+ V W +M++ LAQHG +EA+ LF M
Sbjct: 1235 HFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
GI+PD +T++GVL+AC+H GL + +Y++ M + I P H++ +VD LGRAG +
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRI 1353
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
QEA N I +MP + + +LL ACR + + K A+KLL ++P +S AY L N+Y
Sbjct: 1354 QEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIY 1413
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ +W+D + R MK VKK GFSW+ ++NKVH+F V+D HPQ IY K+ +
Sbjct: 1414 AASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLM 1473
Query: 687 DEIKEMG-FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
I+E G +VPDT L DVEE+ KE+ L +HSEKLAIAFGLISTP + T+R++KNLRVC
Sbjct: 1474 KRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVC 1533
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHSAIK I KL REIV+RDA RFHHF+ G CSC DYW
Sbjct: 1534 GDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 158/620 (25%), Positives = 268/620 (43%), Gaps = 133/620 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK HARI+ G +L N+L+ Y+K S+ A++VFD+ + L +WN+IL+AYA
Sbjct: 629 LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ DS S+ ++ R+F + + T+ T+
Sbjct: 689 QFA---------------DS-SYENVL----------EGFRLFGLLREFGFSITRLTLAP 722
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L C G + + VH + VK G + V+ +L+N+Y K G A+ +FD M ++
Sbjct: 723 LLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERD 782
Query: 211 VSSWNVVVSLHIHSGRLDLA--------RAQFD--------------------------- 235
WNV++ ++ + D A R+ F
Sbjct: 783 AVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQ 842
Query: 236 ------QMIERD----VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
+M D + WN + + G A+ F +L+ S++ D TL L
Sbjct: 843 VKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLR-STIGHDSVTLVIIL 901
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SA + L LG+QIHA +I++ F PV N+L++ Y+K G V A+K
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK----------- 950
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
F + + D+++W M+ Y QN L +A+ FR ++R
Sbjct: 951 ----------------------TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDH---GKQIHASALRSGEASSLSVSNALITMYSKAGN 462
+G KP+ +TL+++L S+ ++ G Q+H A++ G + VS ALI +YSK G
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 463 INAARRVFNLIHWRQ--ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
++ A L+H + + SW +++ + +A++ F M E+GI D IT
Sbjct: 1049 MDEAEF---LLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATA 1105
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP--L 578
+ A G L+ +K +I+ DL +G+L + Y +MP L
Sbjct: 1106 IKAS--GCLIN--------LKQGKQIQAYAIKLGFNNDLWVSSGVL-DMYIKCGDMPNAL 1154
Query: 579 E-------PDVVAWGSLLSA 591
E PD VAW +++S
Sbjct: 1155 ELFGEISRPDEVAWTTMISG 1174
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 221/492 (44%), Gaps = 96/492 (19%)
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
S A+ DL GK+ H+ +V +G +TN+L+ MY+K G
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGS------------------ 661
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ---NGYD--FEALGMFANM 268
L AR FD+ +RD+VTWNS++A Y+Q + Y+ E +F +
Sbjct: 662 -------------LCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFG-L 707
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L++ + TLA L C +++ + +H Y ++ F+ V AL++ Y K G
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIK-----------------------------I 359
V A+ + ++ + + + + +L Y++ I
Sbjct: 768 VGQARLLFDK--MPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVI 825
Query: 360 GDIGP----------------ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
G + A ++F + ++ AW L + G A++ F+++
Sbjct: 826 GGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
+R ++ TL +LS + LD G+QIHA ++S A + VSN+L+ MYSKAG +
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
AA + F + + +SW +MI + AQ+ L EAI F +L G+KPD T VL A
Sbjct: 946 YAAEKTF-INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Query: 524 CTHGGLVEQGQRYYNMMKNVH----KIKPTPSHFAS--MVDLLGRAGLLQEAYNFIENMP 577
C+ G ++G+ Y+ + VH K F S ++DL + G + EA F+ +
Sbjct: 1005 CSTG---DEGE-YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGK 1059
Query: 578 LEPDVVAWGSLL 589
+ D+ +W +++
Sbjct: 1060 YDFDLASWNAIM 1071
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
++A L GK+ HA + SG+ ++N LITMYSK G++ +AR+VF+ R + V+W
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR-DLVTWN 681
Query: 484 SMIVALAQHGLGE-----EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
S++ A AQ E +LF + E G +T +L C G V+ + +
Sbjct: 682 SILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHG 741
Query: 539 MMKNVHKIKPTPSHFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
KI F S +V++ + GL+ +A + MP E D V W +L A
Sbjct: 742 YAV---KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/697 (36%), Positives = 392/697 (56%), Gaps = 77/697 (11%)
Query: 101 VFNLMPNRDSV-SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
+F ++ SV SW +II + G A+ F M + + P + T + SC++L
Sbjct: 41 MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
DL AGK++H G + V ++L++MY+K G
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCG------------------------- 135
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML---------- 269
L+ AR FD++ ER+VV+W SMI+GY QN EA+ +F L
Sbjct: 136 ------YLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEI 189
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ D L +SACA + + + +H ++ F+ VGN
Sbjct: 190 VGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGN------------ 237
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
TL+D Y K G+I +R++FD + + DV +W +++ Y Q
Sbjct: 238 ---------------------TLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ 276
Query: 390 NGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
NGL+ +A LF MV+ G + N TLSA+L + +L GK IH ++ +L
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLV 336
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V +++ MY K G + AR+ F+ + R+ SWT M+ HG G+EA+++F M+
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC 395
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
GIKP++IT+V VL AC+H GL+++G ++N MK ++P H++ MVDLLGRAG L+E
Sbjct: 396 GIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKE 455
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
AY I+ M ++PD + WGSLL ACR+HKN++LG+I+A KL ++P N G Y L N+Y+
Sbjct: 456 AYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYAD 515
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W+D +R MK G+ KT G+S V+ + +VHVF V D HPQ + IY + ++ +
Sbjct: 516 AGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVK 575
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
++E+G++P+ SVL+DV+ + K +LR HSEKLA+AFG++++ + ++I+KNLR+C DC
Sbjct: 576 LQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDC 635
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H AIK I K+V+REIV+RD+ RFHHFK GLCSC DYW
Sbjct: 636 HFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 242/537 (45%), Gaps = 99/537 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H + G +F+ ++L++ Y+K ++ A+K+FDE+P + + SW +++S Y +
Sbjct: 105 GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R A +F D Y+EI + V + D VL + V
Sbjct: 165 NERAREAVFLFKEFLLVDETD-------YDEI--------VGVGVGVDSVL-----LGCV 204
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++C + S + VH VK G GC+ V N+L++ YAK G+ +++ VFDGM +V
Sbjct: 205 ISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDV 264
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SWN +++++ +G EA +F++M+K
Sbjct: 265 CSWNSLIAVYAQNG-------------------------------LSVEAFSLFSDMVKR 293
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ + TL++ L ACA+ L++GK IH +++ E + VG +++ Y K G VE+
Sbjct: 294 GEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEM 353
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A R+ FD L+ ++V +WT M+ GY +G
Sbjct: 354 A---------------------------------RKAFDRLKRKNVKSWTVMVAGYGMHG 380
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVS 450
K+A+++F M+R G KPN T ++L+ S L G + +
Sbjct: 381 HGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY 440
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGE-EAIQLFERML 506
+ ++ + +AG + A + + + + + W S++ A H LGE A +LF+
Sbjct: 441 SCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFK--- 497
Query: 507 ELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ P + Y +L+ G + +R +MKN H + TP + S+V+ GR
Sbjct: 498 ---LDPSNCGYYVLLSNIYADAGRWDDVERMRILMKN-HGLLKTPGY--SIVEHKGR 548
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 186/378 (49%), Gaps = 50/378 (13%)
Query: 231 RAQFDQMIER-DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
R+ F + +++ V +WNS+IA ++++G +AL F++M K SL P++ T T+ +C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRK-LSLHPNRSTFPCTIKSCS 97
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+L L GKQIH + + V +ALI Y+K G + A+K+ ++ I NV+++
Sbjct: 98 SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDE--IPERNVVSW 155
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS--MVREG 407
T+++ GY+ QN ++AV LF+ +V E
Sbjct: 156 TSMISGYV-------------------------------QNERAREAVFLFKEFLLVDET 184
Query: 408 P---------KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
++ L ++S + + + +H A++ G L+V N L+ Y+
Sbjct: 185 DYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYA 244
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITY 517
K G I+ +R+VF+ + + SW S+I AQ+GL EA LF M++ G ++ + +T
Sbjct: 245 KCGEISVSRKVFDGME-ETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTL 303
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
VL AC H G ++ G+ ++ + + +++ S+VD+ + G ++ A + +
Sbjct: 304 SAVLLACAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK 362
Query: 578 LEPDVVAWGSLLSACRVH 595
+V +W +++ +H
Sbjct: 363 -RKNVKSWTVMVAGYGMH 379
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 76/348 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
V + VH +K G + + N+LM+ YAK IS ++KVFD M +CSWN++++ YA
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVT 149
+ G L+ E F+L F +MV+ +V T++
Sbjct: 276 QNG---LSVEAFSL----------------------------FSDMVKRGEVRYNAVTLS 304
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+VL +C G L GK +H VVK L + V S+++MY K G MA+ FD ++ K
Sbjct: 305 AVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRK 364
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
NV SW V M+AGY +G+ EA+ +F M+
Sbjct: 365 NVKSWTV-------------------------------MVAGYGMHGHGKEAMKVFYEMI 393
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY-IIRTEFDATGPVGN--ALISCYAKV 326
+ +KP+ T S L+AC++ LK G H + ++ EFD + + ++ +
Sbjct: 394 R-CGIKPNYITFVSVLAACSHAGLLKEG--WHWFNKMKCEFDVEPGIEHYSCMVDLLGRA 450
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGY-----IKIGDIGPARRIF 369
G ++ A ++++ + + I + +LL +++G+I AR++F
Sbjct: 451 GYLKEAYGLIQEMKVK-PDFIVWGSLLGACRIHKNVELGEI-SARKLF 496
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 366 RRIFDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
R +F D+ V +W +++ + ++G + A+ F SM + PN T + SS
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L L GKQIH A G S + V++ALI MYSK G +N AR++F+ I R VSWTS
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERN-VVSWTS 157
Query: 485 MIVALAQHGLGEEAIQLFERML--------------------ELGIKPDHITYVGV--LT 522
MI Q+ EA+ LF+ L LG V V +T
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217
Query: 523 ACTHG--------GLVEQGQRYYNMMKNVHKIKPTPSHFA-----------SMVDLLGRA 563
C HG G + G + +I + F S++ + +
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277
Query: 564 GLLQEAYNFIENMPLEPDV----VAWGSLLSACRVHKNLDLGKIAAEKLLLIE-PDNSGA 618
GL EA++ +M +V V ++L AC L +GK ++++ +E DN
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVV 337
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
+++ ++Y CG+ E A +K VK
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVK 367
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/771 (35%), Positives = 415/771 (53%), Gaps = 101/771 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FYA L+ ++ R+ +H R++ GL + FL L+N + I YA+K+FDE
Sbjct: 58 FYASLIDNSTHKRHL---DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEF 114
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
D W II +Y+ +++ + M+
Sbjct: 115 CYP-------------------------------DVFMWNAIIRSYSRNNMYRDTVEMYR 143
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M V P FT VL +CT L D +H ++K G V V N L+ +YAK G
Sbjct: 144 WMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCG 203
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+AK V FD + R +V+W S+I+GY+Q
Sbjct: 204 HIGVAKVV-------------------------------FDGLYHRTIVSWTSIISGYAQ 232
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG EAL MF+ M +++ +KPD L S L A +++ L+ G+ IH ++I+ +
Sbjct: 233 NGKAVEALRMFSQM-RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ +L + YAK G V +A + FD ++
Sbjct: 292 LLISLTAFYAKCGLVTVA---------------------------------KSFFDQMKT 318
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+V+ W AM+ GY +NG ++AV LF M+ KP++ T+ + + S+ + SL+ + +
Sbjct: 319 TNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWM 378
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+S S + V+ +LI MY+K G++ ARRVF+ + ++ V W++MI+ HG
Sbjct: 379 DDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDR-NSDKDVVMWSAMIMGYGLHGQ 437
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G EAI L+ M + G+ P+ +T++G+LTAC H GLV++G ++ MK+ +I P H++
Sbjct: 438 GWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDF-EIVPRNEHYS 496
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGRAG L EA FI +P+EP V WG+LLSAC++++ + LG+ AA KL ++P
Sbjct: 497 CVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPY 556
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L NLY+S W+ A++R M+ G+ K G+S ++I K+ F V D HP
Sbjct: 557 NTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPM 616
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
I++++ ++ +KE+GFVP T SVLHD+ + KE+ L HSE++A+A+GLIST T
Sbjct: 617 AKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGT 676
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TLRI KNLR C +CHSAIK I KLV+REI+VRDA RFHHFK GLCSC DYW
Sbjct: 677 TLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/703 (35%), Positives = 402/703 (57%), Gaps = 70/703 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ +AK G L VF+ + R V WT +I Y + G A+ +F++M+++ P
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPD 254
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
Q+T++S+L++CT LG G+++HS ++ GL V+ L++MYAK +
Sbjct: 255 QYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKS---------HN 305
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG-YDFEALG 263
G L N AR F++M + +V+ W ++++GY Q G D + +
Sbjct: 306 GQSLHN-------------------AREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMI 346
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F ML + ++P+ T +S L ACANL G+QIH + +++ VGNAL+S Y
Sbjct: 347 LFCKMLNEG-IRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMY 405
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
A+ G I AR FD L ++++V+++
Sbjct: 406 AES---------------------------------GSIEEARHAFDQLYEKNMVSFSGN 432
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
L G ++ +D + R + +T +++S ++S+ L G+++HA +L++G
Sbjct: 433 LDGDGRSNTYQD-----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGF 487
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
S ++ N+L++MYS+ G + A +VF+ ++ +SWTSMI LA+HG A++LF
Sbjct: 488 GSDRAIGNSLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLAKHGYAARALELFH 546
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M+ G+KP+ +TY+ VL+AC+H GLV++G+ ++ MM+ H + P H+A MVDLLGR+
Sbjct: 547 DMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRS 606
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
GL+++A +FI MP + D + W +LL AC+ H N+D+G+IAA ++ +EP + Y L
Sbjct: 607 GLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLS 666
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
NLY+ G W+ A IR M+ + K +G SW+ + N +H F D HPQ + IY K+
Sbjct: 667 NLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLE 726
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS-TPENTTLRIMKNL 742
+ EIK MG+VPDT+ VLHD+ +++KE L HSEK+A+AFGLIS T +RI KNL
Sbjct: 727 TLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNL 786
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHSA+K++ K REI++RD+ RFH K G CSC +YW
Sbjct: 787 RVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 254/519 (48%), Gaps = 77/519 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
N++L+ Y+K + A VF+ MP RD VSWT + + G A+R+F E +++
Sbjct: 88 NSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEG 147
Query: 141 VLPTQFTVTSVLASCTA--LGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGDEM 197
+LP FT+ + +C A L L AG V V K G G V+V +L++M+AK GD +
Sbjct: 148 LLPNAFTLCAATQACFASELFHL-AGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLV 206
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+ VFDG+ ER VV W +I Y+Q+GY
Sbjct: 207 AMRRVFDGL-------------------------------FERTVVVWTLLITRYAQSGY 235
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EA+ +F +ML++ +PD++TL+S LSAC L +LG+Q+H+ +R ++ V
Sbjct: 236 SDEAVELFLDMLENG-FQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSC 294
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
L+ YAK +G S N AR +F+ + +V
Sbjct: 295 GLVDMYAK-----------SHNGQSLHN-------------------AREVFNRMPKHNV 324
Query: 378 VAWTAMLVGYEQNGLNKDAVE-LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+AWTA+L GY Q G + V LF M+ EG +PN+ T S+ML ++L D G+QIH
Sbjct: 325 MAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHT 384
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
++S A V NAL++MY+++G+I AR F+ + + + VS++ + + +
Sbjct: 385 HCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL-YEKNMVSFSGNLDGDGRSNTYQ 443
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
+ ERM ELGI T+ +++A G++ +GQR + + + S+
Sbjct: 444 D--YQIERM-ELGIST--FTFGSLISAAASVGMLTKGQRLHALSLKA-GFGSDRAIGNSL 497
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
V + R G L +A + M + +V++W S++S H
Sbjct: 498 VSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLAKH 535
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 236/525 (44%), Gaps = 111/525 (21%)
Query: 160 DLSAGKKVHSFVVKTG--LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
D+ G+ + +++TG L V NSLL +Y+K A++VFDGM
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMP---------- 111
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
V L RD+V+W +M + S+NG + EAL +F L++ L P+
Sbjct: 112 VGL-------------------RDLVSWTAMASCLSRNGAEAEALRLFGETLEE-GLLPN 151
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG--GVEIAQKI 335
FTL + AC E L G A++ K+G G +++
Sbjct: 152 AFTLCAATQACFASELFHL------------------AGGAVLGLVFKLGFWGTDVS--- 190
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
L+D + K GD+ RR+FD L +R VV WT ++ Y Q+G + +
Sbjct: 191 ------------VGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDE 238
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
AVELF M+ G +P+ YTLS+MLS + L S G+Q+H+ ALR G S VS L+
Sbjct: 239 AVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVD 298
Query: 456 MYSKAGN---INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ-LFERMLELGIK 511
MY+K+ N ++ AR VFN + + ++WT+++ Q G + + LF +ML GI+
Sbjct: 299 MYAKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIR 357
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF----ASMVDLLGRAGLLQ 567
P+HITY +L AC + G + G++ + H +K + ++V + +G ++
Sbjct: 358 PNHITYSSMLKACANLGDQDSGRQIH-----THCVKSNLADLNVVGNALVSMYAESGSIE 412
Query: 568 EAYNF-----------------------------IENMPLEPDVVAWGSLLSACRVHKNL 598
EA + IE M L +GSL+SA L
Sbjct: 413 EARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGML 472
Query: 599 DLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
G ++ A L + ++L ++YS CG DA + M
Sbjct: 473 TKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 188/457 (41%), Gaps = 123/457 (26%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILS 87
+G+ +H+ ++ GL + L++ YAK+ +S+ A++VF+ MP + +W +LS
Sbjct: 273 LGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLS 332
Query: 88 AYAKQGRLD-----LACEVFN--LMPN----------------RDS-------------- 110
Y ++G D L C++ N + PN +DS
Sbjct: 333 GYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLA 392
Query: 111 ---VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP------------------------ 143
V ++ Y E G + A F ++ + ++
Sbjct: 393 DLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMEL 452
Query: 144 --TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+ FT S++++ ++G L+ G+++H+ +K G + NSL++MY++ G + A
Sbjct: 453 GISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQ 512
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFD M NV ++W SMI+G +++GY A
Sbjct: 513 VFDEMNDHNV-------------------------------ISWTSMISGLAKHGYAARA 541
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ-------IHAYIIRTEFDATGP 314
L +F +M+ + +KP+ T + LSAC++ +K GK+ H I R E A
Sbjct: 542 LELFHDMIA-AGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYA--- 597
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY-----IKIGDIGPARRIF 369
++ + G VE A + + ++ + + TLL + IG+I I
Sbjct: 598 ---CMVDLLGRSGLVEDALDFINEMPCQ-VDALVWKTLLGACKTHNNMDIGEIAANHVI- 652
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
L +D + + Y + GL D V RS++R+
Sbjct: 653 -QLEPQDPAPYVLLSNLYAEAGL-WDQVARIRSLMRD 687
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/707 (36%), Positives = 410/707 (57%), Gaps = 74/707 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YA G+++ A VF M +D VSW T++ + + +AI F +M
Sbjct: 290 NALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P Q +V +++A+ +L AG +VH++ +K G+ +++ NSL++MY K
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKC--------- 400
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+K + S F+ M E+D+++W ++IAGY+QN +AL
Sbjct: 401 ---CCVKYMGS-------------------AFEYMPEKDLISWTTIIAGYAQNECHLDAL 438
Query: 263 GMFANMLKDSSLKP---DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
N+L+ L+ D + S L AC+ L+ KL K+IH Y+++ A + NA+
Sbjct: 439 ----NLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAI 493
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
++ Y ++ V+ A R +F+S+ +D+V+
Sbjct: 494 VNVYGELALVDYA---------------------------------RHVFESINSKDIVS 520
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
WT+M+ NGL +A+ELF S++ +P+ TL ++L +++L+SL GK+IH +
Sbjct: 521 WTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLI 580
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
R G ++N+L+ MY++ G + AR +FN + R + + WTSMI A HG G++AI
Sbjct: 581 RKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQR-DLILWTSMINANGMHGCGKDAI 639
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF +M + + PDHIT++ +L AC+H GLV +G++++ +MKN +K++P P H+A +VDL
Sbjct: 640 DLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDL 699
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
L R+ L+EAY+F+ NMP+EP W +LL ACR+H N DLG++AA+KLL + +NSG Y
Sbjct: 700 LARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNY 759
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
+ N +++ G+W D +R MK +KK G SW++++NK+H F D HPQ + IY
Sbjct: 760 VLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIY 819
Query: 680 NKMAKIWDEIKEM-GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
K+A+ +KE G+ T V HDV E+ K QML HSE+LA+ +GL+ T + T LRI
Sbjct: 820 LKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRI 879
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLR+C+DCH+ K ++ R +VVRDA+RFHHF++GLCSC D+W
Sbjct: 880 TKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 157/620 (25%), Positives = 267/620 (43%), Gaps = 97/620 (15%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIK-CGLHLSVFLKNSLMNFYAKTESI 64
P SL + H L + F + +++ ++ C H ++ L + KT++
Sbjct: 19 PISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQN- 77
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
Y VF + + Y K G A +VF+ M R +W +I G
Sbjct: 78 -YLDSVFLD---------TKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAG 127
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
R+ AI ++ EM V FT VL +C A + G ++H VK G G V V N
Sbjct: 128 RYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCN 187
Query: 185 SLLNMYAKVGDEMMAKAVFDG--MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+L+ MYAK GD A+ +FD M + SWN ++S H+ G
Sbjct: 188 ALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGE---------------- 231
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
EAL +F M ++ ++ + +T S L AC +K+G+ IHA
Sbjct: 232 ---------------SLEALSLFRRM-QEVGVESNTYTFVSALQACEGPTFIKIGRGIHA 275
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
I+++ V NALI+ YA G +E A+
Sbjct: 276 VILKSNHFTDVYVSNALIAMYANCGQMEDAE----------------------------- 306
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
R+F S+ +D V+W +L G QN + DA+ F+ M G KP+ ++ M++ S
Sbjct: 307 ----RVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAAS 362
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
A+L G ++HA A++ G S++ + N+LI MY K + F + ++ +SW
Sbjct: 363 GRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP-EKDLISW 421
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
T++I AQ+ +A+ L ++ + D + +L AC+ G + ++K
Sbjct: 422 TTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS-------GLKSEKLIKE 474
Query: 543 VHK--IKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+H +K + ++V++ G L+ A + E++ D+V+W S+++ C VH
Sbjct: 475 IHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESIN-SKDIVSWTSMITCC-VHNG 532
Query: 598 LDLGKIAAEKLLL---IEPD 614
L + + L+ IEPD
Sbjct: 533 LAIEALELFNSLIETNIEPD 552
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 133/332 (40%), Gaps = 56/332 (16%)
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARR 468
P S L + +S +L G+Q+HA L++ S+ + + MY K G+ A +
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC---- 524
VF+ + R +W +MI A G EAI+L++ M LG+ D T+ VL AC
Sbjct: 104 VFDKMSERT-IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162
Query: 525 -------THGGLVEQGQRYYNMMKNVHKI---------------------KPTPSHFASM 556
HG V+ G + + N K P + S+
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSI 222
Query: 557 VDLLGRAGLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
+ G EA + M +E + + S L AC + +G+ ++L
Sbjct: 223 ISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGR-GIHAVILKSN 281
Query: 614 DNSGAY--SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
+ Y +AL +Y++CG+ EDA + KSM + +QN ++
Sbjct: 282 HFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY-------- 333
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
DAI + + ++++ G PD SVL+
Sbjct: 334 ---SDAINH-----FQDMQDSGQKPDQVSVLN 357
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 37/167 (22%)
Query: 1 METPNPPSLISPLE-FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
+ET P LI+ + YA S+LK GK +H +I+ G L + NSL++ YA
Sbjct: 545 IETNIEPDLITLVSVLYAAAALSSLKK-----GKEIHGFLIRKGFFLEGLIANSLVDMYA 599
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
+ ++ A+ +F+ Y KQ RD + WT++I
Sbjct: 600 RCGTMENARNIFN----------------YVKQ---------------RDLILWTSMINA 628
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
G K+AI +F +M + VLP T ++L +C+ G + GK+
Sbjct: 629 NGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ 675
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/740 (35%), Positives = 410/740 (55%), Gaps = 71/740 (9%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCS----WNTILSAYAKQGRLDLACEVFNLMPN 107
N L+N +T S+ +A ++ ++ + S +N +++ YAK G L+ A +F++ +
Sbjct: 146 NHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHH 205
Query: 108 --RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
+ V+WT++I + A+ +F +M P QFT +S+L++ A + G+
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
++HS + K G + V +L++MYAK D +HS
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCAD--------------------------MHS- 298
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
A FDQM ER++V+WNSMI G+ N A+G+F ++L++ ++ P++ +++S L
Sbjct: 299 ----AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVL 354
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SACAN+ L G+Q+H ++ K G V +
Sbjct: 355 SACANMGGLNFGRQVHGVVV-------------------KYGLVPL-------------- 381
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
+L+D Y K ++F + DRDVV W +++G+ QN ++A F M R
Sbjct: 382 TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRR 441
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
EG P+ + S +L S+SLA+L G IH ++ G ++ + +LITMY+K G++
Sbjct: 442 EGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 501
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A +VF I +SWT+MI A HG + I+LFE ML GI+P H+T+V VL+AC+
Sbjct: 502 AYQVFEGIE-DHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS 560
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
H G VE+G ++N MK +H + P P H+A MVDLLGRAG L EA FIE+MP++P W
Sbjct: 561 HTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVW 620
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
G+LL ACR + NL +G+ AAE+L +EP N G Y L N+ + G+ E+A +R+ M
Sbjct: 621 GALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVN 680
Query: 646 GVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDV 705
GV+K G SW+ ++N VF D H D IY + K+ +K+ G+V +T V + +
Sbjct: 681 GVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHL 740
Query: 706 EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
EE+ +EQ L +HSEKLA+AFGL++ P ++ +RI KNLR C CH+ +K K+ DREI+V
Sbjct: 741 EENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIV 800
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RD RFH F G CSC DYW
Sbjct: 801 RDINRFHRFADGFCSCGDYW 820
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 249/551 (45%), Gaps = 119/551 (21%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P +F ++ +L ++ + G+ +H+ I K G ++F+ +L++ YAK + A +V
Sbjct: 243 PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 302
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD+MP + L SWN+++ + D A +G FK+ +
Sbjct: 303 FDQMPERNLVSWNSMIVGFFHNNLYDRA------------------------VGVFKDVL 338
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
R + V+P + +V+SVL++C +G L+ G++VH VVK GL V NSL++MY
Sbjct: 339 R------EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMY 392
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
K + +G++L F + +RDVVTWN ++
Sbjct: 393 FK------CRFFDEGVKL-------------------------FQCVGDRDVVTWNVLVM 421
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G+ QN EA F M ++ L PD+ + ++ L + A+L L G IH II+ +
Sbjct: 422 GFVQNDKFEEACNYFWVMRREGIL-PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYV 480
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ +LI+ YAK G +L+D Y ++F+
Sbjct: 481 KNMCILGSLITMYAKCG-----------------------SLVDAY----------QVFE 507
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+ D +V++WTAM+ Y+ +G +ELF M+ EG +P++ T +LS S ++
Sbjct: 508 GIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEE 567
Query: 431 G-------KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
G K+IH + G ++ + +AG ++ A+R + + W
Sbjct: 568 GLAHFNSMKKIH--DMNPGPEHYA----CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWG 621
Query: 484 SMIVALAQHG---LGEEAIQLFERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNM 539
+++ A ++G +G EA ER+ E+ +P + YV + CT G +E+ +
Sbjct: 622 ALLGACRKYGNLKMGREAA---ERLFEM--EPYNPGNYVLLANMCTRSGRLEEANEVRRL 676
Query: 540 MKNVHKIKPTP 550
M V+ ++ P
Sbjct: 677 M-GVNGVRKEP 686
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/743 (36%), Positives = 433/743 (58%), Gaps = 61/743 (8%)
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN-LMPNRDSVS 112
++ Y + I A+ +FD MP +WN +++AYA+ RLD A E+F+ ++ RD VS
Sbjct: 79 IIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRDVVS 138
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++ Y R + A +F M L T TSVL G L+ +++
Sbjct: 139 WAILVAGYARHDRLEEASALFRRMP----LWDTVTCTSVLQGYAHNGHLAEAQELFD--- 191
Query: 173 KTGLSGCVNVT--NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
+ G +G + T N+++ Y K +A+ +F ++L+N +SW++++ + +G LDLA
Sbjct: 192 RIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLA 251
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
+ FD+M +RD + + +M A S G
Sbjct: 252 KKSFDRMPQRDSIAFTAMTAVLSDQG---------------------------------- 277
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV---I 347
+L+ +++ Y+ + A NAL+ Y++ G ++ +++ S + + V +
Sbjct: 278 --ELRGAREMLRYLSAVDVIAW----NALLEGYSRTGDLDEVRRLF--SAMEHRTVATTV 329
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
TL++ Y K G + ARR+ D++ R V+WTAM+ Y QNG +A+ LF+ M EG
Sbjct: 330 VAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEG 389
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE--ASSLSVSNALITMYSKAGNINA 465
+P++ TL +++ + L +L GK+IHA +RS + SL + NA+ITMY K GN+
Sbjct: 390 AEPSDITLISVVDSCAVLGTLSLGKRIHAR-IRSSPLFSQSLMLLNAVITMYGKCGNLEL 448
Query: 466 ARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTA 523
AR VF + R + V+WT+MI A AQ+G+GEEAI+LF+ M ++ G +P+ +T++ VL+A
Sbjct: 449 AREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSA 508
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI-ENMPLEPDV 582
C+H G +EQ ++ M + P H+ +VDLLGRAG L EA + + E DV
Sbjct: 509 CSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADV 568
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
V W + LSAC+++ +L+ + AA+++ +EP+N L N+Y++ G+ D A IR M
Sbjct: 569 VCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEM 628
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
K GVKK G SW++I N+VH F V D HP++ IY+++ ++ EIKE G+VPDT VL
Sbjct: 629 KSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVL 688
Query: 703 HDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDRE 762
DV+E+ K Q+L +HSE+LA+A G+ISTP TTLR++KNLRVC+DCH+A KFI ++V R+
Sbjct: 689 RDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQ 748
Query: 763 IVVRDATRFHHFKKGLCSCRDYW 785
I+VRD +RFHHFK G+CSC DYW
Sbjct: 749 IIVRDTSRFHHFKDGVCSCGDYW 771
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 220/466 (47%), Gaps = 37/466 (7%)
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+C L K +H + ++ +TN L++++ K GD A+AVF+ +RL N S
Sbjct: 16 ACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNEYS 75
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
W+ ++ ++ S R+ ARA FD M D TWN MIA Y++ +A +F M+
Sbjct: 76 WSCIIQAYVSSSRIHDARALFDSMPGFDAFTWNIMIAAYARINRLDDARELFHGMISGRD 135
Query: 274 L-----------KPDKFTLASTL---------SACANLEKLKLGKQIHAYIIRTEFDATG 313
+ + D+ AS L C ++ + H + FD G
Sbjct: 136 VVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQ-GYAHNGHLAEAQELFDRIG 194
Query: 314 PVG-------NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
G NA+I+ Y K V++A+ + Q I N +++ LL Y + G + A+
Sbjct: 195 GAGDRDATACNAMIAAYGKNARVDLAEGLFAQ--IKLRNAASWSLLLLTYAQNGHLDLAK 252
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+ FD + RD +A+TAM G + A E+ R + + +A+L S
Sbjct: 253 KSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYL----SAVDVIAWNALLEGYSRTG 308
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
LD +++ SA+ ++ V+ L+ +Y K G ++ ARRV + + R +VSWT+MI
Sbjct: 309 DLDEVRRLF-SAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRT-SVSWTAMI 366
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A AQ+G EAI LF+ M G +P IT + V+ +C G + G+R + +++
Sbjct: 367 AAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLF 426
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP-DVVAWGSLLSA 591
+ +++ + G+ G L+ A E++PL VV W +++ A
Sbjct: 427 SQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRA 472
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 280/844 (33%), Positives = 445/844 (52%), Gaps = 107/844 (12%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
M P PS P + YA + + P + A + G + + N +
Sbjct: 213 MPVPATPSTSPPWKEYAPAAPGVVPLKQP-SSQAAPAGVT--GFDVLTYRLNLGLRSLLS 269
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ + A+ +FD+MP K + S N ILSAY+ G L A +F P+R++ +WT ++ +
Sbjct: 270 SGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAH 329
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV--LASCTALGDLSAGKKVHSFVVKTGLSG 178
GR +A+ +F M+ + V+P + TVT+V L CT +H F +K GL
Sbjct: 330 AAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDT 382
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV------SLHIHSGRL----- 227
V V N+LL+ Y K G A+ VF M K+ ++N ++ LH + +L
Sbjct: 383 HVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 442
Query: 228 -------------------------------------------DLARAQFDQMIERDVVT 244
D R FD+M ERD V+
Sbjct: 443 RAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVS 502
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLK---DSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+N +IA Y+ N L +F M K D + P A+ LS +L + +GKQIH
Sbjct: 503 YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIH 558
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
A ++ + +GNALI Y+K G ++ A+ S S + I++T L+ GY+
Sbjct: 559 AQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS--NFSNRSEKSAISWTALITGYV---- 612
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
QNG +++A++LF M R G +P+ T S+++
Sbjct: 613 ---------------------------QNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 645
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
SSSLA + G+Q+H+ +RSG SS+ + L+ MY+K G ++ A R F+ + R ++S
Sbjct: 646 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN-SIS 704
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W ++I A A +G + AI++FE ML G PD +T++ VL AC+H GL ++ +Y+++MK
Sbjct: 705 WNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMK 764
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
+ + I P H+A ++D LGR G + + MP + D + W S+L +CR+H N +L
Sbjct: 765 HQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELA 824
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
++AA+KL +EP ++ Y L N+Y+ G+WEDAA ++K M+ GV+K G+SWV+I+ K
Sbjct: 825 RVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 884
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
++ F D P D I +++ +++ E+ + G+ PD LH V+ ++K + L++HSE+L
Sbjct: 885 IYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERL 944
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AIAF L++TP T +RIMKNL C DCH+ IK I K+V+R+I+VRD+ RFHHFK G+CSC
Sbjct: 945 AIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSC 1004
Query: 782 RDYW 785
DYW
Sbjct: 1005 GDYW 1008
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/707 (37%), Positives = 394/707 (55%), Gaps = 68/707 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y K GRL +AC+VF+ M R+ VSWT ++ + + G ++ +F +M V
Sbjct: 11 NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVK 70
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT ++ L +C L L G+++H VKTG V NS+++MY+K
Sbjct: 71 PNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK---------- 120
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
GR++ A F+ M R++++WN+MIAGY+ G+ +AL
Sbjct: 121 ---------------------CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKAL 159
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + D+FT STL AC++L +K G QIHA++I G L S
Sbjct: 160 VLFQKMQEVGGF-LDEFTFTSTLKACSDLGAIKEGNQIHAFLI---------TGGFLYSV 209
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
V G L+D Y+K G + ARR+F + ++ V++WTA
Sbjct: 210 NTAVAG----------------------ALIDLYVKCGKLFMARRVFSHIEEKHVISWTA 247
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+++GY Q G +++ELFR + + + + LS+M+ V + A + GKQ+HA A++
Sbjct: 248 LILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVP 307
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+SV N+++ MY K G IN A R+F+ + R +SWT MI +HGLG+EAI+LF
Sbjct: 308 SGVDISVCNSILDMYLKCGMINEAERLFSEMPARN-VISWTVMITGYGKHGLGKEAIRLF 366
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M +PD +TY+ VL C+H GLVE+GQ Y++ + + H IK H+A MVDLLGR
Sbjct: 367 DEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGR 426
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA N +++MPLE +V W +LLSACRVH +L+LGK LL ++ +N Y +
Sbjct: 427 AGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMM 486
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ G W++ IR+ +K +KK G SWV+I +VH F D HP + I+ +
Sbjct: 487 SNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEIL 546
Query: 683 AKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS---TPENTTLRI 738
++ +K E+G+V LHDVEE+ K LR HSEKLAI L+ +R+
Sbjct: 547 KEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRV 606
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH IK + K++ VVRDA RFH F+ GLCSCRDYW
Sbjct: 607 FKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 216/482 (44%), Gaps = 104/482 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H +K G + + NS+++ Y+K I+ A +F+ MPV+ L SWN +++ Y
Sbjct: 91 IGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYT 150
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G + A +F M E+G F + +FT TS
Sbjct: 151 VAGFCEKALVLFQKM---------------QEVGGFLD----------------EFTFTS 179
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VTNSLLNMYAKVGDEMMAKAVFDGMRL 208
L +C+ LG + G ++H+F++ G VN V +L+++Y K G MA+ VF +
Sbjct: 180 TLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K+V SW ++I GY+Q G E++ +F
Sbjct: 240 KHVISW-------------------------------TALILGYAQEGNLAESMELF-RQ 267
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L++SS++ D F L+S + A+ ++ GKQ+HA+ I+ P G + C
Sbjct: 268 LRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKV------PSGVDISVC------ 315
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++LD Y+K G I A R+F + R+V++WT M+ GY
Sbjct: 316 ---------------------NSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYG 354
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
++GL K+A+ LF M + +P++ T A+L S ++ G++ + S L S
Sbjct: 355 KHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQE-YFSRLCSYHGIKAR 413
Query: 449 VSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFE 503
V + ++ + +AG + A+ + + + W +++ A HG LG+E +
Sbjct: 414 VEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILL 473
Query: 504 RM 505
R+
Sbjct: 474 RL 475
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G L +SN LI MY K G + A VF+ + ++ VSWT+++ Q+G E++ L
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRM-LKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLL 560
F +M G+KP+ T+ L AC ++ G++ +++ +K + + S++D+
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGN--SIIDMY 118
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ G + EA E MP+ ++++W ++++
Sbjct: 119 SKCGRINEAACMFEVMPVR-NLISWNAMIAG 148
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/659 (37%), Positives = 388/659 (58%), Gaps = 44/659 (6%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+ A+ + M + + F + SVL +C+ + GK++H F VK GL V V N+L
Sbjct: 91 RYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNAL 150
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
+ MY++ G + A+ +FD M ++V SW+ ++ +I F +R +V+W
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI---------TLFYGFSQRSIVSWT 201
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MIAGY + E +F M++++ P+ T+ S + +C + ++LGK++HAYI+R
Sbjct: 202 AMIAGYIRCNDLEEGERLFVRMIEENVF-PNDITMLSLIISCGFVGAVQLGKRLHAYILR 260
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F G+ +A T L+D Y K G+I AR
Sbjct: 261 NGF------------------GMSLALA---------------TALVDMYGKCGEIRSAR 287
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
IFDS++++DV+ WTAM+ Y Q A +LF M G +PN T+ ++LS+ +
Sbjct: 288 AIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNG 347
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+LD GK HA + G + + ALI MY+K G+I+ A+R+F+ R + +W M+
Sbjct: 348 ALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDR-DICTWNVMM 406
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
HG GE+A++LF M LG+KP+ IT++G L AC+H GLV +G+ + M + +
Sbjct: 407 AGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGL 466
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
P H+ MVDLLGRAGLL EAY IE+MP+ P++ WG++L+AC++HKN ++G++AA
Sbjct: 467 VPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAAR 526
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
+LL +EP N G + N+Y++ +W D A +RK++K G+KK G S +++ VH F
Sbjct: 527 ELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFK 586
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
+ D HP + I +A++ ++KE G++PDT+ VLH+++E+ KE L +HSEKLA+AFG
Sbjct: 587 MGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFG 646
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LIST T +R++KNLR+C+DCH+ K + K+ R I+VRD RFHHF++G CSC YW
Sbjct: 647 LISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 83/491 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H +K GL VF+ N+LM Y++ S+ A+ +FD+M + + SW+T++ AY
Sbjct: 127 MGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYI 186
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+F R VSWT +I Y + R+FV M+++ V P T+ S
Sbjct: 187 T---------LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLS 237
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ SC +G + GK++H+++++ G + + +L++MY K G+ A+A+FD M+ K+
Sbjct: 238 LIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKD 297
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +W ++S + + +D A F QM +
Sbjct: 298 VMTWTAMISAYAQANCIDYAFQLFVQM--------------------------------R 325
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D+ ++P++ T+ S LS CA L +GK HAYI + + + ALI YAK
Sbjct: 326 DNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKC---- 381
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
GDI A+R+F DRD+ W M+ GY +
Sbjct: 382 -----------------------------GDISGAQRLFSEAIDRDICTWNVMMAGYGMH 412
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
G + A++LF M G KPN+ T L S + GK + + G +
Sbjct: 413 GYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEH 472
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERML 506
++ + +AG ++ A ++ + W +M+ A H +GE A +
Sbjct: 473 YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAAREL---- 528
Query: 507 ELGIKPDHITY 517
L ++P + Y
Sbjct: 529 -LALEPQNCGY 538
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/656 (37%), Positives = 388/656 (59%), Gaps = 34/656 (5%)
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+R V+++ P T +++ C+ L GKKVH + +G + + N +L M
Sbjct: 72 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGM 131
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YAK G + A+ VFD M ++V SWNV+V+ + G L+ AR FD+M ERD +W +M+
Sbjct: 132 YAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMV 191
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GY + EAL +++ M + + KP+ FT++S ++A A ++ ++ GK+IH +I+R
Sbjct: 192 TGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGL 251
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
D+ + + +++L+D Y K G I AR IF
Sbjct: 252 DS---------------------------------DEVLWSSLMDMYGKCGCIDEARNIF 278
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
D + D+DVV+WT+M+ Y ++ ++ LF ++ +PN YT S +L+ + L + +
Sbjct: 279 DKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEE 338
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G+Q+H R G S++LI MY+K GNI +AR V + + + VS TS+I
Sbjct: 339 LGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCP-KPDLVSLTSLIGGY 397
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQ+G +EA++ F+ +L+ G KPDH+T+V VL+ACTH GLVE+G ++ + H + T
Sbjct: 398 AQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHT 457
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H+ +VDLL R+G ++ + + MP++P W S+L C + N+DL + AA++L
Sbjct: 458 SDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 517
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
IEP+N Y + N+Y++ GKWE+ +RK M+ +G+ K G SW +I+ K HVF D
Sbjct: 518 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAAD 577
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP + I + ++ ++KE G+VP T+ VLHDVE++ KE+ L +HSEKLA+AF ++S
Sbjct: 578 TSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILS 637
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T E T +++ KNLR C DCHSAIKFI K+ R+I +RD+TRFH F+ G CSCRDYW
Sbjct: 638 TEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 253/539 (46%), Gaps = 78/539 (14%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
P Y +L+Q ++R GK VH I G + + N ++ YAK S+ A+KVF
Sbjct: 86 PASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVF 145
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
DEMP + +CSWN +++ YA+ G L+ A +F+ MP RDS SWT ++ Y + + + A+
Sbjct: 146 DEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALV 205
Query: 132 MFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++ M + P FTV+S +A+ A+ + GK++H +V+ GL + +SL++MY
Sbjct: 206 LYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 265
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
K G A+ +FD + K+V SW ++ + S R W
Sbjct: 266 GKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSR------------------WR---- 303
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
E +F+ ++ S +P+++T + L+ACA+L +LG+Q+H Y+ R FD
Sbjct: 304 ---------EGFSLFSELI-GSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFD 353
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
++LI Y K G +E A+ +V+ G ++++ T+L+ GY
Sbjct: 354 PYSFASSSLIDMYTKCGNIESARHVVD--GCPKPDLVSLTSLIGGYA------------- 398
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
QNG +A++ F +++ G KP++ T +LS + ++
Sbjct: 399 ------------------QNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 440
Query: 431 GKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G + S + + S L+ + +++G + V + + + W S++
Sbjct: 441 GLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGC 500
Query: 490 AQHG---LGEEAIQ-LFERMLELGIKPDH-ITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+ +G L EEA Q LF+ I+P++ +TYV + G E+ + M+ +
Sbjct: 501 STYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 553
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/770 (33%), Positives = 422/770 (54%), Gaps = 133/770 (17%)
Query: 24 LKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWN 83
L+SR+ GK VH+++I CG F+ N+L++ YAK + KVFDE
Sbjct: 188 LRSRDG--GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDE---------- 235
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM--VQDQV 141
M R+ V+W +II + G F +A+ +F+ M +D +
Sbjct: 236 ---------------------MGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGI 274
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P QFT T++L C + + G+++H+ +++ ++ + V L++MY++ G
Sbjct: 275 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECG------- 327
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
RL+ A+ F++M ER+ +WNSMI GY QNG EA
Sbjct: 328 ------------------------RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 363
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + +KPD F+L+S LS+C +L + G+++H +I+R
Sbjct: 364 LRLFKQM-QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN-------------- 408
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVA 379
+E+ GI L V+ L+D Y K G + A +++D +DR+
Sbjct: 409 -------------TMEEEGI--LQVV----LVDMYAKCGSMDYAWKVYDQTIKKDRNTAL 449
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W ++L GY GL K++ F M+ + + T+ ++++
Sbjct: 450 WNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL------------------ 491
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
L + AL+ MYSK G I AR VF+ ++ + VSW +MI ++HG +EA+
Sbjct: 492 -------LVLETALVDMYSKCGAITKARTVFDNMNGKN-IVSWNAMISGYSKHGCSKEAL 543
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
L+E M + G+ P+ +T++ +L+AC+H GLVE+G R + M+ + I+ H+ MVDL
Sbjct: 544 ILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDL 603
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGRAG L++A F+E MP+EP+V WG+LL ACRVHK++D+G++AA++L ++P N G Y
Sbjct: 604 LGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPY 663
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
+ N+Y++ G+W++ +IR+ MK GVKK G SW++I +++ +F HP+ + IY
Sbjct: 664 VIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIY 723
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM----LRHHSEKLAIAFGLISTPENTT 735
N + + + K +G++PDT+ +L +V +D+KE+ L HSE+LA++ GLIS P+ +T
Sbjct: 724 NNLRHLTLQSKGLGYIPDTSFILQNV-KDIKEEEEEEYLLQHSERLALSLGLISLPKKST 782
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLR+C DCH+A KFI K+ R I+ RD RFHHF+ G CSC DYW
Sbjct: 783 IRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 170/656 (25%), Positives = 295/656 (44%), Gaps = 119/656 (18%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
P S ++PL Y+ L+Q + S + GK +H ++I G + +L ++ YA++ +
Sbjct: 65 PASDVNPLP-YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLD 123
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
LC YA++ +F MP R+ +W T+I+ Y +
Sbjct: 124 ------------DLC--------YARK--------LFEEMPERNLTAWNTMILAYARVDD 155
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
+ A +F M++ V P FT S L C AL GK+VHS ++ G G V N+
Sbjct: 156 YMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNA 215
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYAK DE VFD M +N +WN ++S A AQF
Sbjct: 216 LIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS----------AEAQF----------- 254
Query: 246 NSMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
G+ +AL +F M + + ++PD+FT + L+ CAN G+QIHA++
Sbjct: 255 ----------GHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
IR I + I+ + T L+ Y + G +
Sbjct: 305 IR----------------------ANITKNIIVE-----------TELVHMYSECGRLNY 331
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A+ IF+ + +R+ +W +M+ GY+QNG ++A+ LF+ M G KP+ ++LS+MLS S
Sbjct: 332 AKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 391
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN-LIHWRQETVSWT 483
L+ G+++H +R+ + L+ MY+K G+++ A +V++ I + T W
Sbjct: 392 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWN 451
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC----------THGGLVEQG 533
S++ A GL +E+ F MLE I+ D +T V ++ + G + +
Sbjct: 452 SILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKA 511
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP---LEPDVVAWGSLLS 590
+ ++ M + + + +M+ + G +EA E MP + P+ V + ++LS
Sbjct: 512 RTVFDNMNGKNIVS-----WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 566
Query: 591 ACR----VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
AC V + L + E + + Y+ + +L G+ EDA + M
Sbjct: 567 ACSHTGLVEEGLRIFTSMQEDYNI--EAKAEHYTCMVDLLGRAGRLEDAKEFVEKM 620
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 172/383 (44%), Gaps = 85/383 (22%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P +F + LL RN G+ +HA +I+ + ++ ++ L++ Y++ ++YAK
Sbjct: 274 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 333
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
++F+ M + SWN+++ Y + G +
Sbjct: 334 EIFNRMAERNAYSWNSMIEGYQQNGET-------------------------------QE 362
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL--SGCVNVTNSL 186
A+R+F +M + + P F+++S+L+SC +L D G+++H+F+V+ + G + V L
Sbjct: 363 ALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV--L 420
Query: 187 LNMYAKVGDEMMAKAVFDGM--RLKNVSSWNVV--------------------------- 217
++MYAK G A V+D + +N + WN +
Sbjct: 421 VDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY 480
Query: 218 ------------------VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
V ++ G + AR FD M +++V+WN+MI+GYS++G
Sbjct: 481 DVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSK 540
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNA 318
EAL ++ M K + P++ T + LSAC++ ++ G +I + +A
Sbjct: 541 EALILYEEMPK-KGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC 599
Query: 319 LISCYAKVGGVEIAQKIVEQSGI 341
++ + G +E A++ VE+ I
Sbjct: 600 MVDLLGRAGRLEDAKEFVEKMPI 622
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/777 (35%), Positives = 420/777 (54%), Gaps = 100/777 (12%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARII--KCGLHLSVFLKNSLMNFYAKTESISYAKK 69
PLE LL+ + ++N GK++HA +I ++ NSL+N YAK + I A+
Sbjct: 24 PLEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARI 83
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
+ F+ M R+ VSW ++ Y G
Sbjct: 84 L-------------------------------FDGMRKRNVVSWGALMAGYFHNGLVLEV 112
Query: 130 IRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+R+F M+ D + P ++ ++++SC+ G + G + H + +K+GL V N+L+
Sbjct: 113 LRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALIC 172
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY++ D A +V W V L DV ++N +
Sbjct: 173 MYSRRSDVKGAMSV-----------WYEVPGL--------------------DVFSYNII 201
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I G +NGY EAL + M+ D + D T + C++L+ L+LG Q+H + RT
Sbjct: 202 INGLLENGYPSEALEVLDRMV-DECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTG 260
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ V +A+I D Y K G+I AR++
Sbjct: 261 AEYDSFVSSAII---------------------------------DMYGKCGNILNARKV 287
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+ L+ ++VV+WTA+L Y QNG ++A+ F M +G PN YT + +L+ + +++L
Sbjct: 288 FNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISAL 347
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
HGK +H +SG + V NALI MYSK+G+I AA +VF + R ++++W++MI
Sbjct: 348 GHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICR-DSITWSAMICG 406
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
L+ HGLG EA+ +F+ ML P ++T+VGVL+AC H G V++G Y N + I+P
Sbjct: 407 LSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEP 466
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ +V LL +AG L EA NF+++ P++ DVVAW +LLSAC VH+N LGK AE +
Sbjct: 467 GVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELV 526
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L ++P + G Y L N+Y+ +W+ IRK M+ VKK G SW++I+N +HVF E
Sbjct: 527 LQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSE 586
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
HP+ + IY K+ ++ I+ MG+VPD A+V HDVE++ K + + +HSEKLAIA+GL+
Sbjct: 587 GKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLM 646
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TP +R++KNLR+C DCHSA+K I K+ +R I+VRDA RFH F G CSC DYW
Sbjct: 647 KTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 47/331 (14%)
Query: 268 MLKDSSL-KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+LK S++ P + T+ L A+ + LK GK IHA++I T AT
Sbjct: 15 LLKSSTVGHPLEHTI-QLLKVSADTKNLKFGKMIHAHLIITN-QATKD------------ 60
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
N++ +L++ Y K I AR +FD +R R+VV+W A++ G
Sbjct: 61 ------------------NIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAG 102
Query: 387 YEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Y NGL + + LF++M+ + +PN Y + ++S S + G Q H AL+SG
Sbjct: 103 YFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVF 162
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQ----ETVSWTSMIVALAQHGLGEEAIQL 501
V NALI MYS+ ++ A V W + + S+ +I L ++G EA+++
Sbjct: 163 HQYVKNALICMYSRRSDVKGAMSV-----WYEVPGLDVFSYNIIINGLLENGYPSEALEV 217
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLL 560
+RM++ I D++TYV C+H + G Q + M + + S ++++D+
Sbjct: 218 LDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVS--SAIIDMY 275
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G+ G + A + + +VV+W ++L+A
Sbjct: 276 GKCGNILNARKVFNRLQTK-NVVSWTAILAA 305
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/708 (36%), Positives = 392/708 (55%), Gaps = 67/708 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C NT+L YA GR + A VF MP +D +SW +++ ++ GR +A+ + M++
Sbjct: 397 VCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIR 456
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
T TS LA+C + G+ +H VV +GL + N+L++MY K+G
Sbjct: 457 TGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGG--- 513
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+ +R QM RDVV WN++I GY++N
Sbjct: 514 ----------------------------MSTSRRVLLQMPRRDVVAWNALIGGYAENEDP 545
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+AL F L+ + + T+ S LSAC + L+ GK +HAYI+ F++ V N
Sbjct: 546 DKALAAF-QTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKN 604
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YAK G D+ ++ +F+ L +R +
Sbjct: 605 SLITMYAKCG---------------------------------DLSSSQDLFNGLDNRSI 631
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+ W A+L +G ++ ++L M G + ++ S LS ++ LA L+ G+Q+H
Sbjct: 632 ITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 691
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A++ G + NA MYSK G I ++ + SW +I AL +HG EE
Sbjct: 692 AVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLP-PSVNRSLPSWNILISALGRHGYFEE 750
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
+ F MLE+GIKP H+T+V +LTAC+HGGLV+QG YY+M+ ++P H ++
Sbjct: 751 VCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVI 810
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGR+G L EA FI MP++P+ + W SLL++C++H++LD G+ AAE L +EP++
Sbjct: 811 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDS 870
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
+ N++++ G+WED N+RK M + +KK Q SWV++++KV FG+ D HPQ
Sbjct: 871 VFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 930
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ I IKE G+V DT+ L D +E+ KE L +HSE+LA+A+ L+STPE +T+R
Sbjct: 931 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 990
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLR+C+DCHS KF+ +++ R IV+RD RFHHF+ GLCSC+DYW
Sbjct: 991 IFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 147/588 (25%), Positives = 283/588 (48%), Gaps = 94/588 (15%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKN-SLMNFYAKTESISYAK 68
+ +EF+ + +K + + LV A CG S+F + + F AK+ +S
Sbjct: 141 LEGMEFFQKMCDLGIKPSSFVIASLVTA----CGRSGSMFREGVQVHGFVAKSGLLS--- 193
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
++ V T IL Y G + + +VF MP+R+ VSWT+++V Y++ G +
Sbjct: 194 ----DVYVST-----AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 244
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
I ++ M + V + +++ V++SC L D S G+++ V+K+GL + V NSL++
Sbjct: 245 VIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLIS 304
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
M+ +G+ +D A F+Q+ ERD ++WNS+
Sbjct: 305 MFGNMGN-------------------------------VDYANYIFNQISERDTISWNSI 333
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
+A Y+QNG+ E+ +F N+++ + + T+++ LS +++ K G+ IH +++
Sbjct: 334 VAAYAQNGHIEESSRIF-NLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMG 392
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
FD+ V N L+ YA G E A +
Sbjct: 393 FDSVVCVCNTLLRMYAGAGRSE---------------------------------EADLV 419
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +D+++W +++ + +G + DA+ + SM+R G N T ++ L+ S
Sbjct: 420 FKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFF 479
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
D G+ +H + SG + + NAL++MY K G ++ +RRV L R++ V+W ++I
Sbjct: 480 DKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVL-LQMPRRDVVAWNALIGG 538
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIK 547
A++ ++A+ F+ + G+ ++IT V VL+AC G L+E+G+ + + V
Sbjct: 539 YAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYI--VSAGF 596
Query: 548 PTPSHFA-SMVDLLGRAGLL---QEAYNFIENMPLEPDVVAWGSLLSA 591
+ H S++ + + G L Q+ +N ++N ++ W ++L+A
Sbjct: 597 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRS----IITWNAILAA 640
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 205/431 (47%), Gaps = 69/431 (16%)
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
+ G+ +H+ VK + V TN+L+NMY K G
Sbjct: 75 TTGRALHALCVKGLVRLSVLHTNTLINMYTKFG--------------------------- 107
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
R+ AR FD+M R+ V+WN+M++G + G E + F M D +KP F +
Sbjct: 108 ----RVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMC-DLGIKPSSFVI 162
Query: 282 ASTLSACANLEKL-KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
AS ++AC + + G Q+H ++ ++ L+S
Sbjct: 163 ASLVTACGRSGSMFREGVQVHGFVAKS----------GLLS------------------- 193
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+V T +L Y G + +R++F+ + DR+VV+WT+++VGY G ++ ++++
Sbjct: 194 ----DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 249
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
+SM EG + N ++S ++S L G+QI ++SG S L+V N+LI+M+
Sbjct: 250 KSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNM 309
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
GN++ A +FN I R +T+SW S++ A AQ+G EE+ ++F M + + T +
Sbjct: 310 GNVDYANYIFNQISER-DTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTL 368
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L+ + G+ + ++ + +++ + AG +EA + MP +
Sbjct: 369 LSVLGDVDHQKWGRGIHGLVVKM-GFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTK- 426
Query: 581 DVVAWGSLLSA 591
D+++W SL+++
Sbjct: 427 DLISWNSLMAS 437
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I+ G +KNSL+ YAK +S ++ +F+ + +++ +WN IL+A A
Sbjct: 584 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAH 643
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + EV L+ S + QF+ +
Sbjct: 644 HGHGE---EVLKLVSKMRSFGLSL----------------------------DQFSFSEG 672
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++ L L G+++H VK G + N+ +MY+K G+ + +++
Sbjct: 673 LSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 732
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
SWN+++S G + F +M+E + VT+ S++ S G + L +
Sbjct: 733 PSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDM 792
Query: 268 MLKDSSLKP 276
+ KD L+P
Sbjct: 793 IAKDFGLEP 801
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/757 (34%), Positives = 422/757 (55%), Gaps = 71/757 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD-EMPVKTLCSWNTILSAYAKQG 93
+H+ II GLH SV L+ YA + + VF P + WN+I+ A
Sbjct: 35 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRA----- 89
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+T+N G F A+ ++ E + ++ P +T SV+
Sbjct: 90 ------------------------LTHN--GLFSEALSLYSETQRIRLQPDTYTFPSVIN 123
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+C L D K +H V+ G + + N+L++MY + D A+ VF+ M L++V S
Sbjct: 124 ACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS 183
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK--- 270
W NS+I+GY+ NGY EAL ++ +K
Sbjct: 184 W-------------------------------NSLISGYNANGYWNEALEIYYQSIKLFM 212
Query: 271 --DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ KPD T+ S L AC +L L+ GK +H Y+I + ++ N LI+ YAK G
Sbjct: 213 EMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 272
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ +Q++ SG+ + +++ ++++ YI+ G +G + ++F++++ RD++ W ++
Sbjct: 273 LLASQEVF--SGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCV 330
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+ + + M EG P+ T+ ++L V S LA+ GK+IH + G S +
Sbjct: 331 HSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 390
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V N LI MYSK G++ + +VF L+ ++ V+WT++I A +G G++A++ F M
Sbjct: 391 VGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 449
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
GI PDH+ +V ++ AC+H GLVE+G Y++ MK +KI+P H+A +VDLL R+ LL +
Sbjct: 450 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 509
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A +FI +MPL+PD WG+LLSACR+ + ++ + +E+++ + PD++G Y + N+Y++
Sbjct: 510 AEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAA 569
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
GKW+ +IRKS+K G+KK G SW++IQNKV+VFG Q + + + +
Sbjct: 570 LGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGL 629
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+ + G++ + VLHD++ED K +L HSE+LAIAFGL++T T L++MKNLRVC DC
Sbjct: 630 MAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDC 689
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+ K+I K+V RE++VRDA RFH FK G CSC DYW
Sbjct: 690 HTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 230/488 (47%), Gaps = 62/488 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ K +H R++ G +++ N+L++ Y + + A+KVF+EMP++ + SWN+++S Y
Sbjct: 133 MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYN 192
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G + A E+ + +I++F+EMV +Q P T+TS
Sbjct: 193 ANGYWNEALEI------------------------YYQSIKLFMEMV-NQFKPDLLTITS 227
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C LGDL GK VH +++ +G +N L+NMYAK G+ + ++ VF GM+ K+
Sbjct: 228 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 287
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
SWN +++++I +G++ + F+ M RD++TWN++IA + L M + M +
Sbjct: 288 SVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRM-R 346
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ PD T+ S L C+ L + GK+IH I + ++ PVGN LI Y+K G +
Sbjct: 347 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLR 406
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+ ++F ++ +DVV WTA++
Sbjct: 407 ---------------------------------NSFQVFKLMKTKDVVTWTALISACGMY 433
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSV 449
G K AV F M G P++ A++ S ++ G H +
Sbjct: 434 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 493
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
++ + S++ ++ A + + ++ W +++ A G E A ++ ER++EL
Sbjct: 494 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIEL- 552
Query: 510 IKPDHITY 517
PD Y
Sbjct: 553 -NPDDTGY 559
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 420 SVSSSLASLDHGKQIH---ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
S+S +LAS Q+H + + G S+ S LI Y+ + ++ VF L
Sbjct: 18 SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 77
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
W S+I AL +GL EA+ L+ + ++PD T+ V+ AC GL++
Sbjct: 78 NNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLD----- 130
Query: 537 YNMMKNVHKIKPTPSHFAS-------MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ M K++H + F S ++D+ R L +A E MPL DVV+W SL+
Sbjct: 131 FEMAKSIHD-RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLI 188
Query: 590 SA 591
S
Sbjct: 189 SG 190
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/711 (37%), Positives = 405/711 (56%), Gaps = 51/711 (7%)
Query: 82 WNTILSAYAKQGRLDLACEVF--NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
+N +LS YA+ G +D A +F + D V+W T+I + GR + A+++ +MV
Sbjct: 195 FNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVAL 254
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMM 198
V P T S L +C+ L L G++VH+FV+K L+ V ++L++MYA
Sbjct: 255 GVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSH 314
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG-Y 257
A+ VFD +V H R + WN+MI GY+Q+G
Sbjct: 315 ARRVFD------------MVPEH-----------------GRQLGMWNAMICGYAQHGGM 345
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
D EA+ +F+ M ++ P + T+A L ACA E + +H Y+++ + + V N
Sbjct: 346 DEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQN 405
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR-DRD 376
AL+ YA++G ++ A I I +++++ TL+ G I G I A ++ ++
Sbjct: 406 ALMDMYARLGRMDEAHTIFAM--IDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSS 463
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+ ML G + +V+ R M PNN TL +L + LA+ GK+IH
Sbjct: 464 AASGETMLEG------DDTSVDGQRCM------PNNITLMTLLPGCAVLAAPARGKEIHG 511
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+R S L+V +AL+ MY+K G + AR VF+ + R+ ++W +I+A HGLG+
Sbjct: 512 YAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP-RRNVITWNVLIMAYGMHGLGD 570
Query: 497 EAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA+ LF+RM+ G P+ +T++ L AC+H GLV++G + MK + +PTP A
Sbjct: 571 EALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHAC 630
Query: 556 MVDLLGRAGLLQEAYNFIENM-PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VD+LGRAG L EAY I +M P E V AW ++L ACR+H+N+ LG+IAAE+L +EPD
Sbjct: 631 VVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPD 690
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+ Y LCN+YS+ G WE++ +R M+ GV K G SW+++ +H F + HP+
Sbjct: 691 EASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPE 750
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
++ M +W+ ++ G+VPDT+ VLHDV+E K MLR+HSEKLAIAFGL+ P
Sbjct: 751 SAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGA 810
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLRVCNDCH A KFI ++V REIV+RD RFHHF+ G CSC DYW
Sbjct: 811 TIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 247/544 (45%), Gaps = 97/544 (17%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
N +L+AYA+ G LD A +F P RD+VS+ ++I R+ +A+ +M+ D
Sbjct: 89 NALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH 148
Query: 141 VLPTQFTVTSVLASCTALGDLS--AGKKVHSFVVKTGL--SGCVNVT-NSLLNMYAKVGD 195
+ + FT+ SVL +C+ L D G++ H+F +K G G N+LL+MYA++G
Sbjct: 149 EV-SSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLG- 206
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
V D RL S V D+VTWN+MI+ Q
Sbjct: 207 -----LVDDAQRLFFSSGAGV-----------------------GDLVTWNTMISLLVQG 238
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA+ + +M+ ++PD T AS L AC+ LE L +G+++HA++++ + A
Sbjct: 239 GRCEEAVQVLYDMVA-LGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAA--- 294
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD- 374
N + L+D Y + ARR+FD + +
Sbjct: 295 -----------------------------NSFVASALVDMYASNEQVSHARRVFDMVPEH 325
Query: 375 -RDVVAWTAMLVGYEQN-GLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHG 431
R + W AM+ GY Q+ G++++A+ELF M E G P+ T++ +L +
Sbjct: 326 GRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGK 385
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ +H ++ AS+ V NAL+ MY++ G ++ A +F +I R + VSW ++I
Sbjct: 386 EAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLR-DIVSWNTLITGCIV 444
Query: 492 HGLGEEAIQLF------------ERMLE--------LGIKPDHITYVGVLTACTHGGLVE 531
GL EA QL E MLE P++IT + +L C
Sbjct: 445 QGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPA 504
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+G+ + H ++ + +++VD+ + G L A + +P +V+ W L+ A
Sbjct: 505 RGKEIHGYAVR-HALESDLAVGSALVDMYAKCGCLALARAVFDRLPRR-NVITWNVLIMA 562
Query: 592 CRVH 595
+H
Sbjct: 563 YGMH 566
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 227/524 (43%), Gaps = 93/524 (17%)
Query: 31 VGKLVHARIIKCG-LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV--KTLCSWNTILS 87
VG+ VHA ++K L + F+ ++L++ YA E +S+A++VFD +P + L WN ++
Sbjct: 278 VGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMIC 337
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQF 146
YA+ G +D + AI +F M + P++
Sbjct: 338 GYAQHGGMD------------------------------EEAIELFSRMEAEAGCAPSET 367
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T+ VL +C + + VH +VVK ++ V N+L++MYA++G A +F +
Sbjct: 368 TMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMI 427
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQM-IERDVVTWNSMIAGYSQNGYDFEALGMF 265
L+++ SWN +++ I G + A +M + + +M+ G +
Sbjct: 428 DLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTS---------- 477
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+ P+ TL + L CA L GK+IH Y +R ++ VG+AL+ YAK
Sbjct: 478 ---VDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAK 534
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G + + AR +FD L R+V+ W +++
Sbjct: 535 CGCLAL---------------------------------ARAVFDRLPRRNVITWNVLIM 561
Query: 386 GYEQNGLNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GE 443
Y +GL +A+ LF MV G PN T A L+ S +D G ++ R G
Sbjct: 562 AYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGF 621
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQH---GLGEEAI 499
+ + ++ + +AG ++ A + + + + VS W++M+ A H LG A
Sbjct: 622 EPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAA 681
Query: 500 QLFERMLELGIKPDHIT-YVGVLTACTHGGLVEQGQRYYNMMKN 542
ER+ EL +PD + YV + + GL E MM+
Sbjct: 682 ---ERLFEL--EPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQ 720
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 22/282 (7%)
Query: 30 FVGK-LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
F GK VH ++K + + F++N+LM+ YA+ + A +F + ++ + SWNT+++
Sbjct: 382 FTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITG 441
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
QG + A ++ M S + ++ ++ + + +P T+
Sbjct: 442 CIVQGLISEAFQLVREMQLPSSAASGETMLEGDD-----------TSVDGQRCMPNNITL 490
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L C L + GK++H + V+ L + V ++L++MYAK G +A+AVFD +
Sbjct: 491 MTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPR 550
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIER-----DVVTWNSMIAGYSQNGYDFEALG 263
+NV +WNV++ + G D A A FD+M+ + VT+ + +A S +G L
Sbjct: 551 RNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLE 610
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
+F M +D +P + L AC + G+ AY I
Sbjct: 611 LFQGMKRDYGFEPTPY-----LHACVVDVLGRAGRLDEAYGI 647
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 168/397 (42%), Gaps = 41/397 (10%)
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
+S I + G+ AL +++ S D F L + + A L + + IH +
Sbjct: 16 SSSIRSLTAAGHHAAALRALSSLAASPSSALDHFALPPAIKSAAALRDSRSTRAIHGASL 75
Query: 306 RTEF--DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
R T V NAL++ YA+ G ++ A + + + +++ +L+ G
Sbjct: 76 RRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWG 135
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A D+LRD ML +E + ++TL ++L S
Sbjct: 136 HA---LDALRD--------MLADHEVS---------------------SFTLVSVLLACS 163
Query: 424 SLASLDH--GKQIHASALRSG---EASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQ 477
LA H G++ HA AL+ G + NAL++MY++ G ++ A+R+F +
Sbjct: 164 HLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVG 223
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+ V+W +MI L Q G EEA+Q+ M+ LG++PD +T+ L AC+ L+ G+ +
Sbjct: 224 DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVH 283
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA-WGSLLSACRVHK 596
+ + +++VD+ + A + +P + W +++ H
Sbjct: 284 AFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG 343
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
+D I + E + + + + + +C + E
Sbjct: 344 GMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSE 380
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P GK +H ++ L + + ++L++ YAK ++ A+ VFD +P + + +WN ++ A
Sbjct: 503 PARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMA 562
Query: 89 YAKQGRLDLACEVFNLM-------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
Y G D A +F+ M PN V++ + + G + +F M +D
Sbjct: 563 YGMHGLGDEALALFDRMVANGEATPN--EVTFIAALAACSHSGLVDRGLELFQGMKRDY- 619
Query: 142 LPTQFTVTSVLASC 155
F T L +C
Sbjct: 620 ---GFEPTPYLHAC 630
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/787 (35%), Positives = 418/787 (53%), Gaps = 104/787 (13%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+ +P P LE + L + L N K +HAR+++ L +L N ++
Sbjct: 4 LTSPTSPVFSKALEI-KNYLSNGLNFFNQL--KHIHARLLRLHLDQDNYLLNLILCCALD 60
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
S +Y+K VF ++ + WNT++ +G + C
Sbjct: 61 FGSTNYSKLVFSQVKEPNIFLWNTMI-----RGLVSKDC--------------------- 94
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
F +AI ++ M LP FT+ VL +C D+ G K+HS +VK G V
Sbjct: 95 -----FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V SLL++Y K + D A FD + ++
Sbjct: 150 FVKTSLLSLYVKCDN-------------------------------FDDALKVFDDIPDK 178
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+VV+W ++I GY +G+ EA+G F +L + LKPD F+L L+ACA L G+ I
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLL-EMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
YI SG+ NV T+LLD Y+K G
Sbjct: 238 DRYI--------------------------------SDSGMGR-NVFVATSLLDMYVKCG 264
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
++ A IF ++ ++D+V+W+ M+ GY NGL + A++LF M E KP+ YT+ +LS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 421 VSSSLASLDHGKQIHASAL--RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
++L +LD G I AS+L R+ S+ + ALI MYSK G++ A +F + R++
Sbjct: 325 ACATLGALDLG--IWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-RKD 381
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
V W +M+V L+ +G + LF + + GI+PD T++G+L CTHGG V +G++++N
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
MK V + P+ H+ MVDLLGRAGLL EA+ I NMP++P+ V WG+LL C++HK+
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
L + +KL+ +EP NSG Y L N+YS +WE+A IR +MK ++K + SW++I
Sbjct: 502 HLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEI 561
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
VH F V D H + IY K+ ++ E+K +G VP T VL D+EE+ KE L +HS
Sbjct: 562 DGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHS 621
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLA+AFGLI++P N +R++KNLRVC DCH AIK I K+ REI++RD RFH F G
Sbjct: 622 EKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGS 681
Query: 779 CSCRDYW 785
CSCRDYW
Sbjct: 682 CSCRDYW 688
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/701 (37%), Positives = 399/701 (56%), Gaps = 67/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ +YA+ G ++ A +VF+ P +W +I+ Y+ G A+ ++ M + V P
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T T VL +CT DL +G++ V G V V ++LN+YAK G
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCG---------- 154
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
++D A FD+M RD+V W +MI G +QNG EA+ +
Sbjct: 155 ---------------------KMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDI 193
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
+ M K ++ D + + AC L K+G IH Y+IR +
Sbjct: 194 YRQMHK-KRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDI--------------- 237
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
++VI T+L+D Y K G + A +F + ++V++W+A++
Sbjct: 238 ------------------IMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALI 279
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G+ QNG +A++L M G KP++ +L ++L S + L GK +H +R
Sbjct: 280 SGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHF 339
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+S S A+I MYSK G+++ AR VF+ I +R +++SW ++I + HG GEEA+ LF +
Sbjct: 340 DCVS-STAVIDMYSKCGSLSFARTVFDQISFR-DSISWNAIIASYGIHGSGEEALSLFLQ 397
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M E +KPDH T+ +L+A +H GLVE+G+ ++++M N +KI+P+ H+A MVDLL RAG
Sbjct: 398 MRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAG 457
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
++EA IE+M EP + W +LLS C H +G++AA+K+L + PD+ G YS + N
Sbjct: 458 RVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSN 517
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+++ +W++ A +RK MK G+KK G+S +++ K+H F +ED H Q + I + K
Sbjct: 518 FFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGK 577
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ E+K MG+VP T VLH++EE+VKE+ML +HSE+LAIAFGL++T T L I KNLRV
Sbjct: 578 LDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRV 637
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH A KFI K+V+REIVVRD RFHHFK G+CSC DYW
Sbjct: 638 CGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 211/475 (44%), Gaps = 88/475 (18%)
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
K+H+ ++ TG+ G N L+ YA++G HI S
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLG--------------------------HIES- 57
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
AR FD+ + V WN+MI YS+ G FEAL ++ M + ++PD T L
Sbjct: 58 ----ARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASE-GVRPDSSTYTVVL 112
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
AC L+ G++ + + VG A+++ YAK G ++
Sbjct: 113 KACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMD--------------- 157
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
A R+FD + RD+V WT M+ G QNG ++AV+++R M +
Sbjct: 158 ------------------EAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHK 199
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
+ + + + ++ ++L G IH +R + V +L+ MY+K G++
Sbjct: 200 KRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLEL 259
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A VF + ++ +SW+++I AQ+G A+QL M G KPD ++ V VL AC+
Sbjct: 260 ASCVFRRMLYKN-VISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACS 318
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHF-----ASMVDLLGRAGLLQEAYNFIENMPLEP 580
G ++ G K+VH HF +++D+ + G L A + +
Sbjct: 319 QVGFLKLG-------KSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFR- 370
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLL-----IEPDNSGAYSALCNLYSSCG 630
D ++W +++++ +H + G+ A L ++PD++ +++L + +S G
Sbjct: 371 DSISWNAIIASYGIHGS---GEEALSLFLQMRETNVKPDHA-TFASLLSAFSHSG 421
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 215/503 (42%), Gaps = 108/503 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L++ +S + G+ + + G VF+ +++N YAK + A +VFD+M
Sbjct: 108 YTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKM- 166
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
GR DL C WTT+I + G+ + A+ ++ +
Sbjct: 167 -----------------GRRDLVC-------------WTTMITGLAQNGQAREAVDIYRQ 196
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + +V + ++ +CT LG G +H ++++ + V V SL++MYAK G
Sbjct: 197 MHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGH 256
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A VF M KNV ++W+++I+G++QN
Sbjct: 257 LELASCVFRRMLYKNV-------------------------------ISWSALISGFAQN 285
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGP 314
G+ AL + +M + KPD +L S L AC+ + LKLGK +H YI+R FD
Sbjct: 286 GFAGNALQLVVDM-QSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSS 344
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
A+I Y+K G + A R +FD +
Sbjct: 345 --TAVIDMYSKCGSLSFA---------------------------------RTVFDQISF 369
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD ++W A++ Y +G ++A+ LF M KP++ T +++LS S ++ G+
Sbjct: 370 RDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYW 429
Query: 435 HASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ + + A ++ + S+AG + A+ + + W +++ HG
Sbjct: 430 FSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHG 489
Query: 494 ---LGEEAIQLFERMLELGIKPD 513
+GE A + ++LEL PD
Sbjct: 490 KFLIGEMAAK---KVLEL--NPD 507
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 266/755 (35%), Positives = 401/755 (53%), Gaps = 99/755 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH I K G + + NSL++FY + A+K+FDE+
Sbjct: 270 GRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELT---------------- 313
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+RD +SW ++I Y + G I +F++M+ V T+ +V
Sbjct: 314 ---------------DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNV 358
Query: 152 LASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+C +G L GK +HS+ +K L V N+LL+MY+K GD
Sbjct: 359 FVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGD--------------- 403
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
L+ A F++M E+ VV+W SMI GY + G A+ +F M K
Sbjct: 404 ----------------LNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEM-K 446
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ PD + + S L+ACA LK GK +H YI + V NAL YAK
Sbjct: 447 SRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC---- 502
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
G + A +F ++ +DV++W M+ GY +N
Sbjct: 503 -----------------------------GSMKDAHDVFSHMKKKDVISWNTMIGGYTKN 533
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
L +A+ LF M RE KP+ T++ +L +SLA+LD G++IH ALR+G + V+
Sbjct: 534 SLPNEALTLFAEMQRE-SKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVT 592
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NA++ MY K G + AR +F++I ++ VSWT MI HG G EAI F +M GI
Sbjct: 593 NAVVDMYVKCGLLVLARSLFDMIP-NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGI 651
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+PD ++++ +L AC+H GL+++G + +N+MK +I+P H+A MVDLL R G L +A+
Sbjct: 652 EPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAH 711
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
FI+ MP++PD WG+LL CR+H ++ L + AE++ +EP+N+G Y L N+Y+
Sbjct: 712 KFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAE 771
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KWE+ +RK + G+KK G SW++I+ K+++F D PQ I + ++ ++K
Sbjct: 772 KWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMK 831
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+ P TA L + +E KE L HSEKLA+AFG+++ P T+R+ KNLRVC DCH
Sbjct: 832 EEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHE 891
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KF+ K REI++RD++RFHHFK G CSCR YW
Sbjct: 892 MAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/824 (33%), Positives = 435/824 (52%), Gaps = 120/824 (14%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLD 96
AR++K G + + N + + + A+ +FD+MP K + S N ILSAY+ G L
Sbjct: 32 ARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLP 91
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL--AS 154
A +F P+R++ +WT ++ + GR +A+ +F M+ + V+P + TVT+VL
Sbjct: 92 AAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG 151
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVT------------------------------- 183
CT +H F +K GL V V
Sbjct: 152 CTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMR----------------------------------LK 209
N+++ +K G A +F MR L+
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR 264
Query: 210 NVSSWNVVVS-----LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ S NV V+ + LD R FD+M ERD V++N +IA Y+ N L +
Sbjct: 265 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324
Query: 265 FANMLK---DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
F M K D + P A+ LS +L + +GKQIHA ++ + +GNALI
Sbjct: 325 FREMQKLGFDRQVLP----YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 380
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+K G +LD A+ F + ++ ++WT
Sbjct: 381 MYSKCG------------------------MLDA---------AKSNFSNRSEKSAISWT 407
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
A++ GY QNG +++A++LF M R G +P+ T S+++ SSSLA + G+Q+H+ +RS
Sbjct: 408 ALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 467
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G SS+ + L+ MY+K G ++ A R F+ + R ++SW ++I A A +G + AI++
Sbjct: 468 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN-SISWNAVISAYAHYGEAKNAIKM 526
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FE ML G PD +T++ VL AC+H GL ++ +Y+++MK+ + I P H+A ++D LG
Sbjct: 527 FEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 586
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G + + MP + D + W S+L +CR+H N +L ++AA+KL +EP ++ Y
Sbjct: 587 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVI 646
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ G+WEDAA ++K M+ GV+K G+SWV+I+ K++ F D P D I ++
Sbjct: 647 LSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDE 706
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ +++ E+ + G+ PD LH V+ ++K + L++HSE+LAIAF L++TP T +RIMKN
Sbjct: 707 LDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKN 766
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L C DCH+ IK I K+V+R+I+VRD+ RFHHFK G+CSC DYW
Sbjct: 767 LTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 223/498 (44%), Gaps = 107/498 (21%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G VHA +++ L+VF+ NSL++FY+K + + +++FDEMP + S+N I++AY
Sbjct: 253 LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 312
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM----VQDQVLPTQ 145
A W T +R+F EM QVLP
Sbjct: 313 A----------------------WNQCAAT---------VLRLFREMQKLGFDRQVLP-- 339
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
++L+ +L D+ GK++H+ +V GL+ + N+L++MY+K G AK+ F
Sbjct: 340 --YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 397
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
K+ SW ++I GY QNG EAL +F
Sbjct: 398 RSEKSAISW-------------------------------TALITGYVQNGQHEEALQLF 426
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
++M + + L+PD+ T +S + A ++L + LG+Q+H+Y+IR+ + ++ G+ L+ YAK
Sbjct: 427 SDM-RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G ++ A R FD + +R+ ++W A++
Sbjct: 486 CGCLD---------------------------------EALRTFDEMPERNSISWNAVIS 512
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEA 444
Y G K+A+++F M+ G P++ T ++L+ S D K H + +
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+I + G + +++ + ++ + + WTS++ + HG E A ++
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 632
Query: 505 MLELGIKPDHITYVGVLT 522
+ G++P T +L+
Sbjct: 633 L--FGMEPTDATPYVILS 648
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 180/417 (43%), Gaps = 55/417 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA +L + +GK +HA+++ GL L N+L++ Y+K + AK F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K+ SW +++ Y + G+ + A+++F +
Sbjct: 400 EKSAISWTALITGYVQN-------------------------------GQHEEALQLFSD 428
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + P + T +S++ + ++L + G+++HS+++++G V + L++MYAK G
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE----RDVVTWNSMIAG 251
A FD M +N SWN V+S + H G A F+ M+ D VT+ S++A
Sbjct: 489 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
S NG E + F M S+ P K A + L ++ Q+ ++ F A
Sbjct: 549 CSHNGLADECMKYFHLMKHQYSISPWKEHYACVID---TLGRVGCFSQVQKMLVEMPFKA 605
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ +++ G E+A+ ++ G+ + + L + Y + G A +
Sbjct: 606 DPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKK 665
Query: 371 SLRDRDV-----VAWTAM---LVGYEQNGLNKDAVE--------LFRSMVREGPKPN 411
+RDR V +W + + + N L ++ L++ M ++G KP+
Sbjct: 666 IMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 22/298 (7%)
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+ A +++T FD N + G + A+ + +Q + + N+ + +L Y
Sbjct: 30 LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQ--MPHKNIFSLNLILSAYSSS 87
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
GD+ A+ +F S R+ WT M+ + G DA+ LFR+M+ EG P+ T++ +L
Sbjct: 88 GDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVL 147
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
++ +H A++ G + + V N L+ Y K G + AARRVF +H ++
Sbjct: 148 NLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH-DKDA 201
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
V++ +M++ ++ GL +A+QLF M GI H T+ +LT V G + +
Sbjct: 202 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT-------VAAGMAHLLL 254
Query: 540 MKNVHKIKPTPSHFA------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
VH + + S++D + L + + MP E D V++ +++A
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP-ERDNVSYNVIIAA 311
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/783 (34%), Positives = 422/783 (53%), Gaps = 96/783 (12%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCG-LHLSVFLKNSLMNFYAKTE 62
P+ S L+ LLQS S++ +HA + G L + +L L YA
Sbjct: 14 PSSTSTFDSLQC-GTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCG 72
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ YA+ +FD++ +K WN+++ YA N P+R
Sbjct: 73 HMPYAQHIFDQIVLKNSFLWNSMIRGYA-----------CNNSPSR-------------- 107
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
A+ ++++M+ P FT VL +C L G+KVH+ VV GL V V
Sbjct: 108 ------ALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYV 161
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
NS+L+MY K GD ++ AR FD+M+ RD+
Sbjct: 162 GNSILSMYFKFGD-------------------------------VEAARVVFDRMLVRDL 190
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
+WN+M++G+ +NG A +F +M +D + D+ TL + LSAC ++ LK+GK+IH
Sbjct: 191 TSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVG-DRTTLLALLSACGDVMDLKVGKEIHG 249
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
Y++R +G V N + +++D Y +
Sbjct: 250 YVVRN--GESGRVCNGFL----------------------------MNSIIDMYCNCESV 279
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
AR++F+ LR +DVV+W +++ GYE+ G A+ELF MV G P+ T+ ++L+
Sbjct: 280 SCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAAC 339
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ +++L G + + ++ G ++ V ALI MY+ G++ A RVF+ + + +
Sbjct: 340 NQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMP-EKNLPAC 398
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
T M+ HG G EAI +F ML G+ PD + VL+AC+H GLV++G+ + M
Sbjct: 399 TVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTR 458
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ ++P P+H++ +VDLLGRAG L EAY IENM L+P+ W +LLSACR+H+N+ L
Sbjct: 459 DYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAV 518
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
I+A+KL + PD Y L N+Y++ +WED N+R + ++K +S+V++ V
Sbjct: 519 ISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMV 578
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F V D H Q D IY K+ + +++K+ G+ PDT+ VL+DVEE++KE+ML HSE+LA
Sbjct: 579 HQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLA 638
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
+AF LI+T TT+RI KNLRVC DCH+ IK I KL +REI++RD RFHHF+ GLCSC
Sbjct: 639 LAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCG 698
Query: 783 DYW 785
YW
Sbjct: 699 GYW 701
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/659 (37%), Positives = 401/659 (60%), Gaps = 35/659 (5%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
K IR E ++ +++L +C L +S GK++HS + +G S ++N L
Sbjct: 51 KGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHL 110
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
LN+Y+K G+ A A+FD M +N+ S N+++ ++ G L+ A+ FD+M +R+V TWN
Sbjct: 111 LNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWN 170
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+M+ G ++ + EAL +F+ M + S PD+++L S L CA+L L G+Q+HAY+++
Sbjct: 171 AMVTGLTKFEMNEEALLLFSRM-NELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMK 229
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F+ N++ +L Y+K G +
Sbjct: 230 CGFEC---------------------------------NLVVGCSLAHMYMKAGSMHDGE 256
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+ + + D +VAW ++ G Q G + ++ + M G +P+ T +++S S LA
Sbjct: 257 RVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELA 316
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
L GKQIHA A+++G +S +SV ++L++MYS+ G + + + F L ++ V W+SMI
Sbjct: 317 ILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTF-LECKERDVVLWSSMI 375
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A HG GEEAI+LF M + + + IT++ +L AC+H GL ++G ++MM + +
Sbjct: 376 AAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGL 435
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
K H+ +VDLLGR+G L+EA I +MP++ D + W +LLSAC++HKN ++ + A+
Sbjct: 436 KARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVAD 495
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
++L I+P +S +Y L N+YSS +W++ + +R++MK VKK G SWV+++N+VH F
Sbjct: 496 EVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFH 555
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
+ D HP+ I + ++ EIK G+VPDT+SVLHD++ + KEQ+LRHHSEKLAIAF
Sbjct: 556 MGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFA 615
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L++TPE +R+MKNLRVC+DCH AIK+I ++ EI+VRD++RFHHFK G CSC DYW
Sbjct: 616 LMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 230/505 (45%), Gaps = 67/505 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
+++LLQ+ + ++ +GK +H+ I G F+ N L+N Y+K + A +FD M
Sbjct: 71 LFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRM 130
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + S N ++ AY G L+ A +F+ MP+R+ +W ++ + + A+ +F
Sbjct: 131 PRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFS 190
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M + +P ++++ SVL C LG L AG++VH++V+K G + V SL +MY K G
Sbjct: 191 RMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAG 250
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
++ DG R+ N W M + +V WN++++G +Q
Sbjct: 251 ------SMHDGERVIN---W----------------------MPDCSLVAWNTLMSGKAQ 279
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
GY FE + M+K + +PDK T S +S+C+ L L GKQIHA +
Sbjct: 280 KGY-FEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAV--------- 329
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
K G + + + G + + + F ++
Sbjct: 330 ----------KAGASSEVSVVSSLVSMY--------------SRCGCLQDSIKTFLECKE 365
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RDVV W++M+ Y +G ++A++LF M +E N T ++L S D G +
Sbjct: 366 RDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGL 425
Query: 435 HASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ G + L L+ + ++G + A + + + + + W +++ A H
Sbjct: 426 FDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHK 485
Query: 494 LGEEAIQLFERMLELGIKPDHITYV 518
E A ++ + +L + + D +YV
Sbjct: 486 NAEIARRVADEVLRIDPQ-DSASYV 509
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 274/823 (33%), Positives = 436/823 (52%), Gaps = 118/823 (14%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLD 96
AR++K G + + N + + + A+ +FD+MP K + S N ILSAY+ G L
Sbjct: 32 ARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLP 91
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL--AS 154
A +F P+R++ +WT ++ + GR +A+ +F M+ + V+P + TVT+VL
Sbjct: 92 AAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG 151
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVT------------------------------- 183
CT +H F +K GL V V
Sbjct: 152 CTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTY 204
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMR----------------------------------LK 209
N+++ +K G A +F MR L+
Sbjct: 205 NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLR 264
Query: 210 NVSSWNVVVS-----LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ S NV V+ + LD R FD+M ERD V++N +IA Y+ N L +
Sbjct: 265 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRL 324
Query: 265 FANMLKDSSLKPDKFTL--ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M K L D+ L A+ LS +L + +GKQIHA ++ + +GNALI
Sbjct: 325 FREMQK---LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDM 381
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+K G +LD A+ F + ++ ++WTA
Sbjct: 382 YSKCG------------------------MLDA---------AKSNFSNRSEKSAISWTA 408
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY QNG +++A++LF M R G +P+ T S+++ SSSLA + G+Q+H+ +RSG
Sbjct: 409 LITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSG 468
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
SS+ + L+ MY+K G ++ A R F+ + R ++SW ++I A A +G + AI++F
Sbjct: 469 YKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN-SISWNAVISAYAHYGEAKNAIKMF 527
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E ML G PD +T++ VL AC+H GL ++ +Y+++MK+ + I P H+A ++D LGR
Sbjct: 528 EGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGR 587
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
G + + MP + D + W S+L +CR+H N +L ++AA+KL +EP ++ Y L
Sbjct: 588 VGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVIL 647
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ G+WEDAA ++K M+ GV+K G+SWV+I+ K++ F D P D I +++
Sbjct: 648 SNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDEL 707
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+++ E+ + G+ PD LH V+ ++K + L++HSE+LAIAF L++TP T +RIMKNL
Sbjct: 708 DRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNL 767
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ IK I K+V+R+I+VRD+ RFHHFK G+CSC DYW
Sbjct: 768 TACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 223/498 (44%), Gaps = 107/498 (21%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G VHA +++ L+VF+ NSL++FY+K + + +++FDEMP + S+N I++AY
Sbjct: 253 LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 312
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM----VQDQVLPTQ 145
A W T +R+F EM QVLP
Sbjct: 313 A----------------------WNQCAAT---------VLRLFREMQKLGFDRQVLP-- 339
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
++L+ +L D+ GK++H+ +V GL+ + N+L++MY+K G AK+ F
Sbjct: 340 --YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 397
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
K+ SW ++I GY QNG EAL +F
Sbjct: 398 RSEKSAISW-------------------------------TALITGYVQNGQHEEALQLF 426
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
++M + + L+PD+ T +S + A ++L + LG+Q+H+Y+IR+ + ++ G+ L+ YAK
Sbjct: 427 SDM-RRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G ++ A R FD + +R+ ++W A++
Sbjct: 486 CGCLD---------------------------------EALRTFDEMPERNSISWNAVIS 512
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEA 444
Y G K+A+++F M+ G P++ T ++L+ S D K H + +
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+I + G + +++ + ++ + + WTS++ + HG E A ++
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 632
Query: 505 MLELGIKPDHITYVGVLT 522
+ G++P T +L+
Sbjct: 633 L--FGMEPTDATPYVILS 648
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 182/417 (43%), Gaps = 55/417 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA +L + +GK +HA+++ GL L N+L++ Y+K + AK F
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K+ SW +++ Y + G+ + A+++F +
Sbjct: 400 EKSAISWTALITGYVQN-------------------------------GQHEEALQLFSD 428
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + P + T +S++ + ++L + G+++HS+++++G V + L++MYAK G
Sbjct: 429 MRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGC 488
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE----RDVVTWNSMIAG 251
A FD M +N SWN V+S + H G A F+ M+ D VT+ S++A
Sbjct: 489 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
S NG E + F M S+ P K A + L ++ Q+ ++ F A
Sbjct: 549 CSHNGLADECMKYFHLMKHQYSISPWKEHYACVID---TLGRVGCFSQVQKMLVEMPFKA 605
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ +++ G E+A+ ++ G+ + + L + Y + G A +
Sbjct: 606 DPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKK 665
Query: 371 SLRDRDV-----VAWTAM---LVGYEQNGLN-------KDAVE-LFRSMVREGPKPN 411
+RDR V +W + + + N L KD ++ L++ M ++G KP+
Sbjct: 666 IMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 22/298 (7%)
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+ A +++T FD N + G + A+ + +Q + + N+ + +L Y
Sbjct: 30 LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQ--MPHKNIFSLNLILSAYSSS 87
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
GD+ A+ +F S R+ WT M+ + G DA+ LFR+M+ EG P+ T++ +L
Sbjct: 88 GDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVL 147
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
++ +H A++ G + + V N L+ Y K G + AARRVF +H ++
Sbjct: 148 NLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH-DKDA 201
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
V++ +M++ ++ GL +A+QLF M GI H T+ +LT V G + +
Sbjct: 202 VTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT-------VAAGMAHLLL 254
Query: 540 MKNVHKIKPTPSHFA------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
VH + + S++D + L + + MP E D V++ +++A
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMP-ERDNVSYNVIIAA 311
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/752 (35%), Positives = 406/752 (53%), Gaps = 99/752 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH + K G VF+ SL++ Y++ + A KVF +MPVK + SWN ++S + +
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A V N M + V TI TV S+
Sbjct: 200 NGNAAGALGVLNRMKG-EGVKMDTI------------------------------TVASI 228
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C D+ G +H V+K GL V V+N+L+NMY+K G A+ VFD M ++++
Sbjct: 229 LPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S WNS+IA Y QN AL F M +
Sbjct: 289 VS-------------------------------WNSIIAAYEQNNDPSTALRFFKGM-QL 316
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYAKVGGVE 330
++PD T+ S S + L ++ + I ++IR E D +GNAL++ YAK+G +
Sbjct: 317 GGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMN 376
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A + +Q L +D ++W ++ GY QN
Sbjct: 377 CAHTVFDQ---------------------------------LPRKDTISWNTLVTGYTQN 403
Query: 391 GLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
GL +A++ + M PN T +++ S + +L G +IHA +++ + V
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+ LI +Y K G + A +F I R +V W ++I +L HG GEEA+QLF+ ML
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAER 522
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+K DHIT+V +L+AC+H GLV++GQ+ +++M+ + IKP+ H+ MVDLLGRAG L++A
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKA 582
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y + NMP++PD WG+LLSAC+++ N +LG +A+++LL ++ +N G Y L N+Y++
Sbjct: 583 YELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANT 642
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KWE +R + G++KT G+S V + +K VF + HP+ IY ++ + ++
Sbjct: 643 EKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKM 702
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K +G+VPD + V D+EED KEQ+L HSE+LAIAFG+ISTP + +RI KNLRVC DCH
Sbjct: 703 KSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCH 762
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
+A K+I ++ +REIVVRD+ RFHHFK G+CSC
Sbjct: 763 NATKYISRISEREIVVRDSNRFHHFKDGICSC 794
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 159/628 (25%), Positives = 282/628 (44%), Gaps = 113/628 (17%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +HA ++ G ++ L L+N Y IS ++ FD + K + SWN+I+SAY +
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G+ A N ++F + P +T +L
Sbjct: 99 GKYHEAMNCVN---------------------------QLFSMCGGGHLRPDFYTFPPIL 131
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C +L D GKKVH V K G V V SL+++Y++ G +A VF M +K+V
Sbjct: 132 KACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SW N+MI+G+ QNG ALG+ N +K
Sbjct: 189 SW-------------------------------NAMISGFCQNGNAAGALGVL-NRMKGE 216
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+K D T+AS L CA + + G IH ++++ D+ V NALI+ Y+K G ++ A
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
Q +FD + RD+V+W +++ YEQN
Sbjct: 277 Q---------------------------------MVFDQMEVRDLVSWNSIIAAYEQNND 303
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EASSLSVSN 451
A+ F+ M G +P+ T+ ++ S+ S L+ + I +R + + N
Sbjct: 304 PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGN 363
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GI 510
AL+ MY+K G +N A VF+ + R++T+SW +++ Q+GL EAI + M E
Sbjct: 364 ALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDT 422
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
P+ T+V ++ A +H G ++QG + + ++KN + + ++DL G+ G L++A
Sbjct: 423 IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDA 480
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVH----------KNLDLGKIAAEKLLLIEPDNSGAY 619
+ +P + V W +++++ +H K++ ++ A+ + + ++ ++
Sbjct: 481 MSLFYEIPRDTS-VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 620 SALCNLYSSCGK-WEDAANIRKSMKYVG 646
S L + C + I+ S+K+ G
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYG 567
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 205/494 (41%), Gaps = 97/494 (19%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A +L +S + G L+H ++K GL VF+ N+L+N Y+K + A+ VFD+M V
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ L SWN+I++AY + N D A+R F M
Sbjct: 286 RDLVSWNSIIAAYEQ---------------NNDP----------------STALRFFKGM 314
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGD 195
+ P TV S+ + + L D + + FV++ L V + N+L+NMYAK+G
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGY 374
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A VFD + K+ SW N+++ GY+QN
Sbjct: 375 MNCAHTVFDQLPRKDTISW-------------------------------NTLVTGYTQN 403
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA+ + M + P++ T S + A +++ L+ G +IHA +I+ V
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
LI Y K G +E A + ++ RD
Sbjct: 464 ATCLIDLYGKCGRLEDAMSL--------------------------------FYEIPRDT 491
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
V W A++ +G ++A++LF+ M+ E K ++ T ++LS S +D G++
Sbjct: 492 S-VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCF 550
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+ G SL ++ + +AG + A + + + + W +++ A +G
Sbjct: 551 DIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610
Query: 495 GEEAIQLFERMLEL 508
E +R+LE+
Sbjct: 611 AELGTLASDRLLEV 624
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+S +++ K++HA L G++ ++ +S LI +Y G+I+ +R F+ IH ++ SW
Sbjct: 30 NSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH-KKNIFSW 88
Query: 483 TSMIVALAQHGLGEEAI----QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
S+I A + G EA+ QLF ++PD T+ +L AC LV+ G++ +
Sbjct: 89 NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV--SLVD-GKKVHC 145
Query: 539 MMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
V K+ F AS+V L R G+L A+ +MP++ DV +W +++S
Sbjct: 146 C---VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISG 196
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/775 (34%), Positives = 412/775 (53%), Gaps = 99/775 (12%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L + LL+ + G+ VHA++ GL +L N Y K + A++VFD
Sbjct: 16 LRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFD 75
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
M P+RD V+W ++ Y G +A+
Sbjct: 76 RM-------------------------------PSRDRVAWNAVVAGYARNGLPSSAMEA 104
Query: 133 FVEMVQDQ--VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
V M ++ P T+ SVL +C L A ++VH+F ++ GL VNV+ ++L+ Y
Sbjct: 105 VVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAY 164
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
K G ++ ARA FD M R+ V+WN+MI
Sbjct: 165 CKCG-------------------------------AVEAARAVFDCMPVRNSVSWNAMID 193
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GY+ NG EA+ +F M+++ D LA+ L AC L L +++H ++R
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAA-LQACGELGYLDEVRRVHELLVRVGLS 252
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ V NALI+ YAK ++A ++ + G
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELG------------------------------ 282
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+ ++W AM++G+ QN +DA LF M E +P+++TL +++ + ++
Sbjct: 283 --NKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQ 340
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
+ IH ++R + V ALI MYSK G ++ ARR+F+ R ++W +MI
Sbjct: 341 ARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRH-VITWNAMIHGYG 399
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG G+ A++LFE M G P+ T++ VL AC+H GLV++GQ+Y+ MK + ++P
Sbjct: 400 SHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGM 459
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+ +MVDLLGRAG L EA++FI+NMP+EP + +G++L AC++HKN++L + +A+ +
Sbjct: 460 EHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFE 519
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+ P+ + L N+Y++ W+D A +R +M+ G++KT G+S +Q++N+VH F
Sbjct: 520 LGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGST 579
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
H IY ++AK+ +EIK+MG+VPDT S+ HDVE+DVK Q+L HSEKLAIA+GLI T
Sbjct: 580 NHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRT 638
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TT++I KNLRVCNDCH+A K I L REI++RD RFHHFK G CSC DYW
Sbjct: 639 APGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/709 (36%), Positives = 390/709 (55%), Gaps = 67/709 (9%)
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+C NT+L YA GR A VF MP +D +SW +++ ++ GR +A+ + M+
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
T TS LA+C G+ +H VV +GL + N+L++MY K+G+
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE-- 412
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+ +R QM RDVV WN++I GY+++
Sbjct: 413 -----------------------------MSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKLGKQIHAYIIRTEFDATGPVG 316
+AL F M + + + T+ S LSAC + L+ GK +HAYI+ F++ V
Sbjct: 444 PDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N+LI+ YAK G D+ ++ +F+ L +R+
Sbjct: 503 NSLITMYAKCG---------------------------------DLSSSQDLFNGLDNRN 529
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
++ W AML +G ++ ++L M G + ++ S LS ++ LA L+ G+Q+H
Sbjct: 530 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG 589
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A++ G + NA MYSK G I ++ + SW +I AL +HG E
Sbjct: 590 LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP-PSVNRSLPSWNILISALGRHGYFE 648
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
E F MLE+GIKP H+T+V +LTAC+HGGLV++G YY+M+ ++P H +
Sbjct: 649 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICV 708
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
+DLLGR+G L EA FI MP++P+ + W SLL++C++H NLD G+ AAE L +EP++
Sbjct: 709 IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDD 768
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
Y N++++ G+WED N+RK M + +KK Q SWV++++KV FG+ D HPQ
Sbjct: 769 SVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTM 828
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
IY K+ I IKE G+V DT+ L D +E+ KE L +HSE+LA+A+ L+STPE +T+
Sbjct: 829 EIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTV 888
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RI KNLR+C+DCHS KF+ +++ R IV+RD RFHHF++GLCSC+DYW
Sbjct: 889 RIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 145/588 (24%), Positives = 278/588 (47%), Gaps = 94/588 (15%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKN-SLMNFYAKTESISYAK 68
+ +EF+ + +K + + LV A CG S+F + + F AK+ +S
Sbjct: 40 LEGMEFFRKMCDLGIKPSSFVIASLVTA----CGRSGSMFREGVQVHGFVAKSGLLS--- 92
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
++ V T IL Y G + + +VF MP+R+ VSWT+++V Y++ G +
Sbjct: 93 ----DVYVST-----AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
I ++ M + V + +++ V++SC L D S G+++ VVK+GL + V NSL++
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
M +G+ A +FD M ++ SW NS+
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISW-------------------------------NSI 232
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
A Y+QNG+ E+ +F+ +++ + + T+++ LS +++ K G+ IH +++
Sbjct: 233 AAAYAQNGHIEESFRIFS-LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
FD+ V N L+ YA G + VE A +
Sbjct: 292 FDSVVCVCNTLLRMYAGAG------RSVE---------------------------ANLV 318
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +D+++W +++ + +G + DA+ L SM+ G N T ++ L+ +
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ G+ +H + SG + + NAL++MY K G ++ +RRV L R++ V+W ++I
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL-LQMPRRDVVAWNALIGG 437
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIK 547
A+ ++A+ F+ M G+ ++IT V VL+AC G L+E+G+ + + V
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI--VSAGF 495
Query: 548 PTPSHFA-SMVDLLGRAGLL---QEAYNFIENMPLEPDVVAWGSLLSA 591
+ H S++ + + G L Q+ +N ++N +++ W ++L+A
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN----RNIITWNAMLAA 539
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/587 (23%), Positives = 253/587 (43%), Gaps = 130/587 (22%)
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
Y K + A+ +FD MPV+ SWNT++S +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR-------------------------- 35
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL-SAGKKVHSFVVKTGL 176
+G + + F +M + P+ F + S++ +C G + G +VH FV K+GL
Sbjct: 36 -----VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 90
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
V V+ ++L++Y G ++ VF+ +
Sbjct: 91 LSDVYVSTAILHLYGVYGLVSCSRKVFE-------------------------------E 119
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
M +R+VV+W S++ GYS G E + ++ M + + ++ +++ +S+C L+ L
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
G+QI ++++ ++ V N+LIS +G V+ A
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN----------------------- 215
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
IFD + +RD ++W ++ Y QNG +++ +F M R + N+ T+S
Sbjct: 216 ----------YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 265
Query: 417 AMLSVSSSLASLDH---GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
+LSV L +DH G+ IH ++ G S + V N L+ MY+ AG A VF +
Sbjct: 266 TLLSV---LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 322
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC--------- 524
++ +SW S++ + G +A+ L M+ G +++T+ L AC
Sbjct: 323 P-TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 525 --THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
HG +V G Y ++ N ++V + G+ G + E+ + MP DV
Sbjct: 382 RILHGLVVVSGLFYNQIIGN------------ALVSMYGKIGEMSESRRVLLQMP-RRDV 428
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
VAW +L+ ++ D +AA + + +E +S Y + ++ S+C
Sbjct: 429 VAWNALIGGYAEDEDPD-KALAAFQTMRVEGVSSN-YITVVSVLSAC 473
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/556 (19%), Positives = 215/556 (38%), Gaps = 137/556 (24%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H ++K G V + N+L+ YA A VF +MP K L SWN++++++
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 92 QGR----LDLACEVFNLMPNRDSVSWTT-------------------------------- 115
GR L L C + + + + V++T+
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 116 ---IIVTYNEIGRFKNAIRMFVEMVQDQVLP----------------------------- 143
++ Y +IG + R+ ++M + V+
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 144 --TQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
TV SVL++C GD L GK +H+++V G +V NSL+ MYAK GD ++
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+F+G+ +N+ +W N+M+A + +G+ E
Sbjct: 520 DLFNGLDNRNIITW-------------------------------NAMLAANAHHGHGEE 548
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
L + + M + + D+F+ + LSA A L L+ G+Q+H ++ F+
Sbjct: 549 VLKLVSKM-RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH--------- 598
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ F D Y K G+IG ++ +R + +W
Sbjct: 599 ------------------------DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 634
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
++ ++G ++ F M+ G KP + T ++L+ S +D G + R
Sbjct: 635 NILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 694
Query: 441 S-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
G ++ +I + ++G + A + + + + W S++ + HG +
Sbjct: 695 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGR 754
Query: 500 QLFERMLELGIKPDHI 515
+ E + +L + D +
Sbjct: 755 KAAENLSKLEPEDDSV 770
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 178/404 (44%), Gaps = 69/404 (17%)
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY K G A+ +FD M ++N SW N+M
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSW-------------------------------NTM 29
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL-KLGKQIHAYIIRT 307
++G + G E + F M D +KP F +AS ++AC + + G Q+H ++ ++
Sbjct: 30 MSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS 88
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ V A++ Y G V ++K+ E+ + NV+++T+L
Sbjct: 89 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEE--MPDRNVVSWTSL--------------- 131
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+VGY G ++ +++++ M EG N ++S ++S L
Sbjct: 132 ----------------MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G+QI ++SG S L+V N+LI+M GN++ A +F+ + R +T+SW S+
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAA 234
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A AQ+G EE+ ++F M + + T +L+ H + G+ + ++ +
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM-GFD 293
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++ + AG EA + MP + D+++W SL+++
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 279/773 (36%), Positives = 423/773 (54%), Gaps = 105/773 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPN-RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
N +++ YAK G LD A VF LM + RD SW ++I + G F A+ +F M + +
Sbjct: 203 NALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVL 262
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV-TNSLLNMYAKVGDEMMAK 200
+T VL CT L L+ G+++H+ ++K+G VN+ N+LL MY K G
Sbjct: 263 SMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSE--VNIQCNALLVMYTKCG------ 314
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
R+D A F ++ E+D ++WNSM++ Y QNG E
Sbjct: 315 -------------------------RVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAE 349
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL- 319
A+ + ML+ +PD + S SA +L L GK++HAY I+ D+ VGN L
Sbjct: 350 AIEFISEMLR-GGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLM 408
Query: 320 ------------------------------ISCYAK----VGGVEI---AQK-------- 334
I+CYA+ + +EI AQK
Sbjct: 409 DMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468
Query: 335 ----IVEQ-SGI----------------SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
I+E SG+ L+++ ++D Y + G++ + ++F+++
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVE 528
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+D+V WT+M+ Y +GL +A+ LF M +P++ L ++L L+SL GK+
Sbjct: 529 QKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKE 588
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H +R ++ ++L+ MYS G+++ A +VFN + + + V WT+MI A HG
Sbjct: 589 VHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMHG 647
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G++AI LF+RML+ G+ PDH++++ +L AC+H LV +G+ Y +MM + ++++P H+
Sbjct: 648 HGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHY 707
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
A +VDLLGR+G +EAY FI++MPL+P V W SLL ACRVHKN +L +AA +LL +EP
Sbjct: 708 ACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEP 767
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
DN G Y + N+++ GKW +A +R + G++K SW++I N VH F D H
Sbjct: 768 DNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHR 827
Query: 674 QRDAIYNKMAKIWDEI-KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
+ I K+A+I + + KE G+ DT SVLHDV E+ K +L HSE+LAI+FGLI+T
Sbjct: 828 DAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRP 887
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRI KNLRVC DCH K + KL DR+IVVRDA RFHHF G CSC D+W
Sbjct: 888 GMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 181/680 (26%), Positives = 282/680 (41%), Gaps = 137/680 (20%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGL--HLSVFLKNSLMNFYAK 60
T P P E Y +L + G VHA + G FL L+ Y K
Sbjct: 48 TSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGK 107
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
++ A+ +FD M +T+ SWN ++ AY G ACE +
Sbjct: 108 CGRVADARLLFDGMSSRTVFSWNALIGAYLSSGS---ACEALGVY--------------- 149
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
A+R+ V P T+ SVL + GD G +VH VK GL
Sbjct: 150 -------RAMRL---SAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST 199
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V N+L+ MYAK G A VF+ M H GR
Sbjct: 200 FVANALIAMYAKCGILDSAMRVFELM----------------HDGR-------------- 229
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
DV +WNSMI+G QNG +AL +F M + + L + +T L C L +L LG+++
Sbjct: 230 DVASWNSMISGCLQNGMFLQALDLFRGMQR-AVLSMNSYTTVGVLQVCTELAQLNLGREL 288
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA ++++ G E+ I LL Y K G
Sbjct: 289 HAALLKS--------------------GSEVN--------------IQCNALLVMYTKCG 314
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
+ A R+F + ++D ++W +ML Y QNGL +A+E M+R G +P++ + ++ S
Sbjct: 315 RVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSS 374
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
L L +GK++HA A++ S V N L+ MY K I + VF+ + + + +
Sbjct: 375 AVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIK-DHI 433
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT--------------- 525
SWT++I AQ EA+++F + GIK D + +L AC+
Sbjct: 434 SWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYA 493
Query: 526 -HGGLV-------------EQGQRYYN--MMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
GL+ E G+ Y++ M + V + + SM++ +GLL EA
Sbjct: 494 IRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVT--WTSMINCYANSGLLNEA 551
Query: 570 ---YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD---NSGAYSALC 623
+ +++ ++PD VA S+L A +L GK LI + S+L
Sbjct: 552 LVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHG--FLIRRNFHMEEAIVSSLV 609
Query: 624 NLYSSCGKWEDAANIRKSMK 643
++YS CG A + ++K
Sbjct: 610 DMYSGCGSLSGALKVFNAVK 629
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 64/269 (23%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ K +H I+ GL L + +KN +++ Y + + ++ K+F+ + K + +W ++++ Y
Sbjct: 484 LLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCY 542
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A G L+ A+ +F EM V P +
Sbjct: 543 ANSGLLN-------------------------------EALVLFAEMQSTDVQPDSVALV 571
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L + L L+ GK+VH F+++ + +SL++MY+ G A VF+ ++ K
Sbjct: 572 SILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK 631
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
D+V W +MI +G+ +A+ +F ML
Sbjct: 632 -------------------------------DMVLWTAMINATGMHGHGKQAIDLFKRML 660
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGK 298
+ + + PD + + L AC++ + + GK
Sbjct: 661 Q-TGVTPDHVSFLALLYACSHSKLVNEGK 688
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/708 (36%), Positives = 390/708 (55%), Gaps = 67/708 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C NT+L YA GR A VF MP +D +SW +++ ++ GR +A+ + M+
Sbjct: 386 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 445
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
T TS LA+C G+ +H VV +GL + N+L++MY K+G+
Sbjct: 446 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE--- 502
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+ +R QM RDVV WN++I GY+++
Sbjct: 503 ----------------------------MSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 534
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+AL F M + + + T+ S LSAC + L+ GK +HAYI+ F++ V N
Sbjct: 535 DKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 593
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YAK G D+ ++ +F+ L +R++
Sbjct: 594 SLITMYAKCG---------------------------------DLSSSQDLFNGLDNRNI 620
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+ W AML +G ++ ++L M G + ++ S LS ++ LA L+ G+Q+H
Sbjct: 621 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 680
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A++ G + NA MYSK G I ++ + SW +I AL +HG EE
Sbjct: 681 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP-PSVNRSLPSWNILISALGRHGYFEE 739
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
F MLE+GIKP H+T+V +LTAC+HGGLV++G YY+M+ ++P H ++
Sbjct: 740 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 799
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGR+G L EA FI MP++P+ + W SLL++C++H NLD G+ AAE L +EP++
Sbjct: 800 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 859
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y N++++ G+WED N+RK M + +KK Q SWV++++KV FG+ D HPQ
Sbjct: 860 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 919
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ I IKE G+V DT+ L D +E+ KE L +HSE+LA+A+ L+STPE +T+R
Sbjct: 920 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 979
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLR+C+DCHS KF+ +++ R IV+RD RFHHF++GLCSC+DYW
Sbjct: 980 IFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/611 (24%), Positives = 278/611 (45%), Gaps = 123/611 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +K + LSV N+L+N Y K + A+ +FD MPV+ SWNT++S +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+G + + F +M + P+ F + S+
Sbjct: 151 -------------------------------VGLYLEGMEFFRKMCDLGIKPSSFVIASL 179
Query: 152 LASCTALGDL-SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ +C G + G +VH FV K+GL V V+ ++L++Y G ++ VF+ M +N
Sbjct: 180 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 239
Query: 211 VSSW---------------------------------------------NVVVSLHIHSG 225
V SW N ++S+ G
Sbjct: 240 VVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 299
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
+D A FDQM ERD ++WNS+ A Y+QNG+ E+ +F+ +++ + + T+++ L
Sbjct: 300 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS-LMRRFHDEVNSTTVSTLL 358
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
S +++ K G+ IH +++ FD+ V N L+ YA G + VE
Sbjct: 359 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG------RSVE-------- 404
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
A +F + +D+++W +++ + +G + DA+ L SM+
Sbjct: 405 -------------------ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 445
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G N T ++ L+ + + G+ +H + SG + + NAL++MY K G ++
Sbjct: 446 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 505
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC- 524
+RRV L R++ V+W ++I A+ ++A+ F+ M G+ ++IT V VL+AC
Sbjct: 506 SRRVL-LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 564
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFA-SMVDLLGRAGLL---QEAYNFIENMPLEP 580
G L+E+G+ + + V + H S++ + + G L Q+ +N ++N
Sbjct: 565 LPGDLLERGKPLHAYI--VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR---- 618
Query: 581 DVVAWGSLLSA 591
+++ W ++L+A
Sbjct: 619 NIITWNAMLAA 629
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 138/573 (24%), Positives = 244/573 (42%), Gaps = 126/573 (21%)
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
I + + GR KN + DQ+ +Q T+ + G+ VH+ VK +
Sbjct: 57 IAMFEKSGRKKNHWNPEISCF-DQIGFSQITIETT------------GRAVHALCVKGLV 103
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
V TN+L+NMY K G A+ +FD M ++N S
Sbjct: 104 RLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVS----------------------- 140
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL-K 295
WN+M++G + G E + F M D +KP F +AS ++AC + +
Sbjct: 141 --------WNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTACGRSGSMFR 191
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
G Q+H ++ ++ + V A++ Y G V ++K+ E+ + NV+++T+L+ G
Sbjct: 192 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE--MPDRNVVSWTSLMVG 249
Query: 356 YI---------------------------------------------KIGDIGPARRIFD 370
Y +G++ A IFD
Sbjct: 250 YSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 309
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+ +RD ++W ++ Y QNG +++ +F M R + N+ T+S +LSV L +DH
Sbjct: 310 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV---LGHVDH 366
Query: 431 ---GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G+ IH ++ G S + V N L+ MY+ AG A VF + ++ +SW S++
Sbjct: 367 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMA 425
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-----------THGGLVEQGQRY 536
+ G +A+ L M+ G +++T+ L AC HG +V G Y
Sbjct: 426 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 485
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
++ N ++V + G+ G + E+ + MP DVVAW +L+ +
Sbjct: 486 NQIIGN------------ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDE 532
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ D +AA + + +E +S Y + ++ S+C
Sbjct: 533 DPD-KALAAFQTMRVEGVSSN-YITVVSVLSAC 563
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 35/203 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H +K G F+ N+ + Y+K I K+ ++L SWN ++SA +
Sbjct: 674 GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 733
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + C F+ EM++ + P T S+
Sbjct: 734 HGYFEEVCATFH-------------------------------EMLEMGIKPGHVTFVSL 762
Query: 152 LASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L +C+ G + G + + + GL + ++++ + G A+ M +K
Sbjct: 763 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 822
Query: 210 NVSSW-NVVVSLHIHSGRLDLAR 231
N W +++ S IH G LD R
Sbjct: 823 NDLVWRSLLASCKIH-GNLDRGR 844
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/713 (35%), Positives = 395/713 (55%), Gaps = 69/713 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
CS + +L R +L + D SW ++I G A+ F M +
Sbjct: 10 FCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK 69
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ PT+ + + +C++L D+ +GK+ H G + V+++L+ MY+ G
Sbjct: 70 LSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG---- 125
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+L+ AR FD++ +RD+V+W SMI GY NG
Sbjct: 126 ---------------------------KLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNA 158
Query: 259 FEALGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+A+ +F ++L D ++ D L S +SAC+ + L + IH+++I+ FD
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VGN L+ YAK G G + AR+IFD +
Sbjct: 219 SVGNTLLDAYAKGGE-------------------------------GGVAVARKIFDQIV 247
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP-NNYTLSAMLSVSSSLASLDHGK 432
D+D V++ +++ Y Q+G++ +A E+FR +V+ N TLS +L S +L GK
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IH +R G + V ++I MY K G + AR+ F+ + + SWT+MI H
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G +A++LF M++ G++P++IT+V VL AC+H GL +G R++N MK ++P H
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+ MVDLLGRAG LQ+AY+ I+ M ++PD + W SLL+ACR+HKN++L +I+ +L ++
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
N G Y L ++Y+ G+W+D +R MK G+ K GFS +++ +VHVF + D H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQR+ IY +A++ ++ E G+V +T+SV HDV+E+ KE LR HSEKLAIAFG+++T
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVP 606
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T+ ++KNLRVC+DCH+ IK I K+VDRE VVRDA RFHHFK G CSC DYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 226/523 (43%), Gaps = 95/523 (18%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F GK H + G +F+ ++L+ Y+ + A+KVFDE+P + + SW +++ Y
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGY 152
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G A +F ++V N+ D + +
Sbjct: 153 DLNGNALDAVSLFK-----------DLLVDENDD--------------DDAMFLDSMGLV 187
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE--MMAKAVFDGMR 207
SV+++C+ + + +HSFV+K G V+V N+LL+ YAK G+ +A+ +FD +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K+ S+N ++S++ SG + A F ++++ VVT+N++
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI------------------- 288
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
TL++ L A ++ L++GK IH +IR + VG ++I Y K G
Sbjct: 289 ------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
VE A R+ FD +++++V +WTAM+ GY
Sbjct: 337 RVETA---------------------------------RKAFDRMKNKNVRSWTAMIAGY 363
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASS 446
+G A+ELF +M+ G +PN T ++L+ S G + +A R G
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L ++ + +AG + A + + + +++ W+S++ A H E A R+
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 507 ELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKP 548
EL + Y +L+ G + +R +MKN +KP
Sbjct: 484 EL--DSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKP 524
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 68/270 (25%)
Query: 26 SRNPFVG--KLVHARIIKCGLHLSVFLKNSLMNFYAK--TESISYAKKVFDEMPVKTLCS 81
SR P G + +H+ +IK G V + N+L++ YAK ++ A+K+FD++ K S
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 82 WNTILSAYAKQGRLDLACEVF-NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
+N+I+S YA+ G + A EVF L+ N+ +VT+N I
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNK--------VVTFNAI----------------- 288
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
T+++VL + + G L GK +H V++ GL V V S+++MY K G A+
Sbjct: 289 ------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR 342
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
FD M+ KNV S W +MIAGY +G+ +
Sbjct: 343 KAFDRMKNKNVRS-------------------------------WTAMIAGYGMHGHAAK 371
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACAN 290
AL +F M+ DS ++P+ T S L+AC++
Sbjct: 372 ALELFPAMI-DSGVRPNYITFVSVLAACSH 400
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/717 (36%), Positives = 407/717 (56%), Gaps = 35/717 (4%)
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
++F+ + N + T++ Y + AI ++ M++ V +T + SC+
Sbjct: 81 QIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRL 140
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
GK + V+K G V + N+L+NMYA G+ A+ VFDG + ++ SWN +++
Sbjct: 141 AEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLA 200
Query: 220 LHIHSGRLDLARAQFDQMIER-------------------------------DVVTWNSM 248
++ G ++ A+ +D+M ER D+V+W+++
Sbjct: 201 GYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSAL 260
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+ Y QN EAL +F M + + D+ + S LSAC+ L + GK +H +++
Sbjct: 261 ISCYEQNEMYEEALILFKEM-NANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVG 319
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ + NALI Y+ V AQK+ +S L+ I++ +++ GY+K G+I AR +
Sbjct: 320 IETYVNLQNALIHMYSSCEEVVTAQKLFSES--CCLDQISWNSMISGYVKCGEIEKARAL 377
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
FDS+ D+D V+W+AM+ GY Q + + LF+ M EG KP+ L +++S + LA+L
Sbjct: 378 FDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAAL 437
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
D GK IHA ++G ++ + LI MY K G + A VF + + +W ++I+
Sbjct: 438 DQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE-EKGVSTWNALILG 496
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
LA +GL +++++ F M E G+ P+ IT+V VL AC H GLV++G R++N M HKI P
Sbjct: 497 LAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGP 556
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ MVDLLGRAG+L+EA IE+MP+ PDV WG+LL AC+ + + + G+ KL
Sbjct: 557 NIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKL 616
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+ + PD+ G L N+Y+S G W D +R M+ GV KT G S ++ +VH F
Sbjct: 617 VELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAG 676
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D HPQ + I + + ++ ++K G+ PDT V D++E+ KE L HSEKLAIAFGLI
Sbjct: 677 DKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLI 736
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ T +RI+KNLR+CNDCH+A K I K +REIVVRD RFHHFK+G CSC DYW
Sbjct: 737 AIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/739 (36%), Positives = 413/739 (55%), Gaps = 82/739 (11%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
V + N L+N + A++VFD++P + + ++S Y + RL A +F+ MP
Sbjct: 40 VLICNHLLN-----RRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPL 94
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
RD VSW ++I E G A++MF EM + V+ S TA+
Sbjct: 95 RDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVV-----------SWTAM--------- 134
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
++GC + G A+ +F M +K++++WN +V ++ G++
Sbjct: 135 --------VNGCF-----------RFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQFGKV 175
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
D A F QM ++V++W +MI G QN EAL +F NML+ +K T ++A
Sbjct: 176 DDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLR-CCIKSTSRTFTCVITA 234
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
CAN +G Q+H +II++ F V +LI+ YA E
Sbjct: 235 CANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTE----------------- 277
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
+R++F + V WTA+L GY N ++DA+ +F M+R
Sbjct: 278 ----------------DSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNS 321
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
PN T ++ L+ S+L +LD GK+IH A++ G + V N+L+ MYS +GN+N A
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAV 381
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
VF I +++ VSW S+IV AQHG G+ A +F +M+ L +PD IT+ G+L+AC+H
Sbjct: 382 SVFIEI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 528 GLVEQGQR-YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
G +++G++ +Y + ++ I H+ MVD+LGR G L+EA IE+M ++P+ + W
Sbjct: 441 GFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWL 500
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LLSACR+H ++D G+ AA + ++ +S AY L N+Y+S G+W + +R MK G
Sbjct: 501 ALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKG 560
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+ K G SWV I+ K H F D H R I+ K+ + +++KE+G+VPD S LHDVE
Sbjct: 561 IMKKPGSSWVVIRGKKHEFFSGDRPHCLR--IFEKLEFLREKLKELGYVPDYRSALHDVE 618
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
++ KE+ML +HSE+LAIAFGLI+T E +T+ +MKNLRVC DCH+ IK I ++V +IV+R
Sbjct: 619 DEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLR 678
Query: 767 DATRFHHFKKGLCSCRDYW 785
D TRFHHFK G+CSC DYW
Sbjct: 679 DPTRFHHFKNGMCSCGDYW 697
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 136/309 (44%), Gaps = 65/309 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G VH IIK G ++ SL+ YA + ++KVF EM + + W +LS Y+
Sbjct: 243 MGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYS 302
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
NR + ++A+ +F EM+++ +LP Q T S
Sbjct: 303 ---------------LNR----------------KHEDALNVFSEMIRNSILPNQSTFAS 331
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L SC+ALG L GK++H VK GL V NSL+ MY+ G+ A +VF + K+
Sbjct: 332 GLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKS 391
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ SWN S+I G +Q+G A +F M++
Sbjct: 392 IVSWN-------------------------------SIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR--TEFDATGPVGNALISCYAKVGG 328
+ +PD+ T LSAC++ L+ G+++ YI D ++ + G
Sbjct: 421 LNK-EPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGE 479
Query: 329 VEIAQKIVE 337
++ A+K++E
Sbjct: 480 LKEAEKLIE 488
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H +K GL F+ NSL+ Y+ + +++ A VF E+ K++ SWN+I+ A+
Sbjct: 345 GKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQ 404
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR W +I F +M++ P + T T +
Sbjct: 405 HGR----------------GKWAFVI---------------FGQMIRLNKEPDEITFTGL 433
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGC---VNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
L++C+ G L G+K+ + + +GL+ + ++++ + G+ A+ + + M +
Sbjct: 434 LSACSHCGFLQKGRKLF-YYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVV 492
Query: 209 K 209
K
Sbjct: 493 K 493
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/702 (35%), Positives = 400/702 (56%), Gaps = 68/702 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ +A+ G L A +VFN + R V WT +I Y + G A+ +F+ M++D P
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T++S++++C G G+++HS V++ GL V+ L++MY K+ E
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ------- 301
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEALG 263
++ AR F +M +V++W ++I+GY Q G + A+
Sbjct: 302 ---------------------SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVE 340
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+ ML +S ++P+ T +S L ACANL G+QIHA +++T VGNAL+S Y
Sbjct: 341 LLCEMLNES-IEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMY 399
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
A+ G +E A+K +Q + LL IG+ G R +W++
Sbjct: 400 AESGCMEEARKAFDQ--------LYERNLLSTSSDIGETG-----------RSNASWSSQ 440
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ + + +T +++LS ++++ G+Q+HA ++++G
Sbjct: 441 IESMDVG-------------------VSTFTFASLLSAAATVGLPTKGQQLHALSIKTGF 481
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
S +SN+L++MYS+ G ++ A R F+ + +SWTS+I ALA+HG E A+ LF
Sbjct: 482 ESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFH 541
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M+ G+KP+ +TY+ VL+AC+H GLV++G+ Y+ M+ H++ P H+A MVDLL R+
Sbjct: 542 DMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARS 601
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
GL+QEA FI MP + D + W +LL ACR ++N+++G+IAA ++ +EP + Y L
Sbjct: 602 GLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLS 661
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
NLY+ G W++ A IR M++ + K G SW+ + N +H F D HP+ IY K+A
Sbjct: 662 NLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLA 721
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ EIK++G+VPDT+ VLHD+ + +KEQ L HSEK+A+AFGLI+T +RI KNLR
Sbjct: 722 VLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLR 781
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCHSAIK+I K REI++RD+ RFH K G CSC +YW
Sbjct: 782 VCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 227/520 (43%), Gaps = 109/520 (20%)
Query: 164 GKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI 222
G+ +H ++ T L V NSLL MY+K G A+ VFDGMR
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGL------------- 108
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
RD+V+W +M ++NG + EAL + ML +S L+P+ FTL
Sbjct: 109 -----------------RDLVSWTAMAFCLTRNGAEQEALVLLGEML-ESGLRPNAFTLC 150
Query: 283 STLSACANLEKLKL-GKQIHAYIIRTEFDATG-PVGNALISCYAKVGGVEIAQKIVEQSG 340
+ AC E + G + + I+T F T VG ALI
Sbjct: 151 AAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALI-------------------- 190
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
D + + GD+ AR++F+ L +R VV WT M+ Y Q G AVELF
Sbjct: 191 -------------DMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELF 237
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK- 459
M+ +G +P+ YT+S+M+S + S G+Q+H+ LR G S VS L+ MY+K
Sbjct: 238 LGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKL 297
Query: 460 --AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE--AIQLFERMLELGIKPDHI 515
++ AR+VF + +SWT++I Q G G+E A++L ML I+P+H+
Sbjct: 298 QMEQSMECARKVFKRMP-THNVMSWTALISGYVQCG-GQENNAVELLCEMLNESIEPNHL 355
Query: 516 TYVGVLTACTHGGLVEQGQRYYN--MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF- 572
TY +L AC + + G++ + M ++ + + ++V + +G ++EA
Sbjct: 356 TYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGN---ALVSMYAESGCMEEARKAF 412
Query: 573 ----------------------------IENMPLEPDVVAWGSLLSACRVHKNLDLG-KI 603
IE+M + + SLLSA G ++
Sbjct: 413 DQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQL 472
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
A + + G ++L ++YS CG +DA M+
Sbjct: 473 HALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEME 512
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/527 (22%), Positives = 232/527 (44%), Gaps = 112/527 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAK---TESISYAKKVFDEMPVKTLCSWNTILS 87
+G+ +H+ +++ GL + L++ Y K +S+ A+KVF MP + SW ++S
Sbjct: 267 LGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALIS 326
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
Y + G G+ NA+ + EM+ + + P T
Sbjct: 327 GYVQCG------------------------------GQENNAVELLCEMLNESIEPNHLT 356
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S+L +C L D +G+++H+ V+KT + V N+L++MYA+
Sbjct: 357 YSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAE--------------- 401
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
SG ++ AR FDQ+ ER++++ +S I G + +++
Sbjct: 402 ----------------SGCMEEARKAFDQLYERNLLSTSSDI------GETGRSNASWSS 439
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
++ + FT AS LSA A + G+Q+HA I+T F++ + N+L+S Y++ G
Sbjct: 440 QIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCG 499
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR-DRDVVAWTAMLVG 386
YL+ A R FD + D +V++WT+++
Sbjct: 500 ---------------YLD------------------DACRAFDEMEDDHNVISWTSIISA 526
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-AS 445
++G + A+ LF M+ G KPN+ T A+LS S + + GK+ S +
Sbjct: 527 LAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIP 586
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ ++ + +++G + A N + + + + W +++ A + E I++ E
Sbjct: 587 RMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTY----ENIEIGEIA 642
Query: 506 LE--LGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
+ ++P D YV + HGGL ++ R ++M++ + K T
Sbjct: 643 ARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKET 689
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 144/303 (47%), Gaps = 43/303 (14%)
Query: 296 LGKQIHAYIIRTE-FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
LG+ +H ++ TE DA V N+L++ Y+K G V
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVR------------------------ 96
Query: 355 GYIKIGDIGPARRIFDSLRD-RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
ARR+FD +R RD+V+WTAM +NG ++A+ L M+ G +PN +
Sbjct: 97 ---------AARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAF 147
Query: 414 TLSAMLSVSSSLASL-DHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFN 471
TL A G + A+++G + +SV ALI M+++ G++ AAR+VFN
Sbjct: 148 TLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFN 207
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ R V WT MI Q G +A++LF MLE G +PD T +++AC G
Sbjct: 208 GLVERT-VVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAG 266
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE---AYNFIENMPLEPDVVAWGSL 588
GQ+ ++++ + + T +VD+ + + Q A + MP +V++W +L
Sbjct: 267 LGQQLHSLVLRLGLVSDTCVS-CGLVDMYTKLQMEQSMECARKVFKRMPTH-NVMSWTAL 324
Query: 589 LSA 591
+S
Sbjct: 325 ISG 327
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 26/229 (11%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL + P G+ +HA IK G + NSL++ Y++ + A + FDEM
Sbjct: 453 FASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEME 512
Query: 76 VK-TLCSWNTILSAYAKQGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKN 128
+ SW +I+SA AK G + A +F+ M PN V++ ++ + +G K
Sbjct: 513 DDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPN--DVTYIAVLSACSHVGLVKE 570
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK---------KVHSFVVKTGLSGC 179
F M +D L + + + A L K + V KT L C
Sbjct: 571 GKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGAC 630
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
N ++G E+ A+ V D + ++ + + ++ +L+ H G D
Sbjct: 631 RTYEN------IEIG-EIAARHVID-LEPQDPAPYVLLSNLYAHGGLWD 671
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/787 (35%), Positives = 418/787 (53%), Gaps = 104/787 (13%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+ P+ P LE + L + L N K +HAR+++ L +L N ++
Sbjct: 4 LTNPSSPVFSKALEI-KNYLSNGLNFFNQL--KHIHARLLRLHLDQDNYLLNLILCCALD 60
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
S +Y+K VF ++ + WNT++ +G + C
Sbjct: 61 FGSTNYSKLVFSQVKEPNIFLWNTMI-----RGLVSKDC--------------------- 94
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
F +AI ++ M LP FT+ VL +C D+ G K+HS +VK G V
Sbjct: 95 -----FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V SLL++Y K + D A FD + ++
Sbjct: 150 FVKTSLLSLYVKCDN-------------------------------FDDALKVFDDIPDK 178
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+VV+W ++I GY +G+ EA+G F +L + LKPD F+L L+ACA L G+ I
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLL-EMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
YI SG+ NV T+LLD Y+K G
Sbjct: 238 DRYI--------------------------------SDSGMGR-NVFVATSLLDMYVKCG 264
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
++ A IF ++ ++D+V+W+ M+ GY NGL + A++LF M E KP+ YT+ +LS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 421 VSSSLASLDHGKQIHASAL--RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
++L +LD G I AS+L R+ S+ + ALI MYSK G++ A +F + +++
Sbjct: 325 ACATLGALDLG--IWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKD 381
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
V W +M+V L+ +G + LF + + GI+PD T++G+L CTHGG V +G++++N
Sbjct: 382 RVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
MK V + P+ H+ MVDLLGRAGLL EA+ I NMP++P+ V WG+LL C++HK+
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
L + +KL+ +EP NSG Y L N+YS +WE+A IR +MK ++K + SW++I
Sbjct: 502 HLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEI 561
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
VH F V D H + IY K+ ++ E+K +G VP T VL D+EE+ KE L +HS
Sbjct: 562 DGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHS 621
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLA+AFGLI++P N +R++KNLRVC DCH AIK I K+ REI++RD RFH F G
Sbjct: 622 EKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGS 681
Query: 779 CSCRDYW 785
CSCRDYW
Sbjct: 682 CSCRDYW 688
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/737 (35%), Positives = 416/737 (56%), Gaps = 35/737 (4%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
FL ++ A +E + V VK L N+++ YA G++DL +VF+ M R
Sbjct: 127 FLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLER 186
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
+ VSWT++I Y+ + K A+ +F EMV+ V P T+ +++C L DL GKKV
Sbjct: 187 NVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVC 246
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+ + + G+ V N+LL+MY K GD M A
Sbjct: 247 NLMTELGVKSNTLVVNALLDMYMKCGD-MYA----------------------------- 276
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
R FD+ ++++V +N++++ Y Q+G E L + ML+ +PDK T+ ST++AC
Sbjct: 277 -VREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ-RPDKVTMLSTIAAC 334
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
A L L +GK HAY+ R + + NA+I Y K G E A K+ + +S V+
Sbjct: 335 AQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDS--MSNKTVVT 392
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
+ +L+ G ++ G++ A RIF + + ++V+W M+ Q + ++A++L R M +G
Sbjct: 393 WNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGI 452
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
K + T+ + S L +LD K I+ ++ + + AL+ M+S+ G+ A R
Sbjct: 453 KGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMR 512
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF + +++ +WT+ I A G + AI+LF+ ML+ +K D +V +LTA +HGG
Sbjct: 513 VFENME-KRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGG 571
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
V+QG++ + M+ +H + P H+ MVDLLGRAGLL+EA++ +++MP++P+ V WGS
Sbjct: 572 YVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSF 631
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L+ACR HKN++ A EK+ + P+ G + L N+Y+S GKW D A +R MK G +
Sbjct: 632 LAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQ 691
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G S +++ + F D H + I + +I I ++G+VPDT +VL DV+E
Sbjct: 692 KVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQ 751
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE +L HSEKLA+A+GLI+T + +R++KNLR+C+DCHS K + KL REI VRD
Sbjct: 752 EKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDN 811
Query: 769 TRFHHFKKGLCSCRDYW 785
R+H FK+G CSCRD+W
Sbjct: 812 NRYHFFKEGFCSCRDFW 828
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 229/532 (43%), Gaps = 105/532 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY-- 89
G VH ++K GL +F+ NSL++FYA + +KVFDEM + + SW ++++ Y
Sbjct: 141 GVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSV 200
Query: 90 ---------------------------------AKQGRLDLACEVFNLMPNRDSVSWTTI 116
AK L+L +V NLM S T +
Sbjct: 201 VNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLV 260
Query: 117 I----------------------------VTYNEI-------GRFKNAIRMFVEMVQDQV 141
+ V YN I G + + EM+Q
Sbjct: 261 VNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ 320
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P + T+ S +A+C LGDLS GK H++V + GL N++N++++MY K G A
Sbjct: 321 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACK 380
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFD M K V +WN +++ + G L+LA F +M E ++V+WN+MI Q EA
Sbjct: 381 VFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEA 440
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ + M ++ +K D+ T+ SAC L L L K I+ YI + + +G AL+
Sbjct: 441 IDLLREM-QNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALV- 498
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
D + + GD A R+F+++ RDV AWT
Sbjct: 499 --------------------------------DMFSRCGDPLNAMRVFENMEKRDVSAWT 526
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR- 440
A + G K A+ELF M+++ K +++ A+L+ S +D G+Q+ + +
Sbjct: 527 AAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKI 586
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
G + + ++ + +AG + A + + + V W S + A +H
Sbjct: 587 HGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKH 638
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 226/514 (43%), Gaps = 98/514 (19%)
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
T+I Y G K AI +++ M+ ++P FT +L++C+ + S G +VH VVK
Sbjct: 91 TLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVK 150
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
GL + V NSL++ YA G + + VFD M
Sbjct: 151 MGLVKDLFVANSLIHFYAACGKVDLGRKVFDEM--------------------------- 183
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+ER+VV+W S+I GYS EA+ +F M+ + ++P+ T+ +SACA L+
Sbjct: 184 ----LERNVVSWTSLINGYSVVNMAKEAVCLFFEMV-EVGVEPNPVTMVCAISACAKLKD 238
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L+LGK++ + + V NAL+ Y K G
Sbjct: 239 LELGKKVCNLMTELGVKSNTLVVNALLDMYMKCG-------------------------- 272
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
D+ R IFD D+++V + ++ Y Q+GL + + + M+++G +P+
Sbjct: 273 -------DMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKV 325
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN-- 471
T+ + ++ + L L GK HA R+G ++SNA+I MY K G AA +VF+
Sbjct: 326 TMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSM 385
Query: 472 ----LIHW------------------------RQETVSWTSMIVALAQHGLGEEAIQLFE 503
++ W VSW +MI A+ Q + EEAI L
Sbjct: 386 SNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLR 445
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M GIK D +T VG+ +AC + G ++ + Y ++ + I ++VD+ R
Sbjct: 446 EMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEK-NDIHIDMQLGTALVDMFSRC 504
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
G A ENM + DV AW + + V N
Sbjct: 505 GDPLNAMRVFENME-KRDVSAWTAAIRVKAVEGN 537
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 194/420 (46%), Gaps = 51/420 (12%)
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D+ + + T N++I GY+ +G EA+ ++ +M+ + PD FT LSAC+ +
Sbjct: 79 DEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAF 138
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
G Q+H +++ V N+LI YA G V++ +K+ ++ + NV+++T+L++
Sbjct: 139 SEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDE--MLERNVVSWTSLIN 196
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
GY + + K+AV LF MV G +PN T
Sbjct: 197 GYSVV-------------------------------NMAKEAVCLFFEMVEVGVEPNPVT 225
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+ +S + L L+ GK++ G S+ V NAL+ MY K G++ A R +F+
Sbjct: 226 MVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFS 285
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
+ V + +++ QHGL E + + + ML+ G +PD +T + + AC G + G+
Sbjct: 286 -DKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGK 344
Query: 535 R-----YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ N ++ + I +++D+ + G + A ++M VV W SL+
Sbjct: 345 SSHAYVFRNGLERLDNISN------AIIDMYMKCGKREAACKVFDSMS-NKTVVTWNSLI 397
Query: 590 SACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
+ L+L +I E + N +++ + +E+A ++ + M+ G+K
Sbjct: 398 AGLVRDGELELALRIFGE----MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIK 453
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 129/250 (51%), Gaps = 4/250 (1%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK HA + + GL + N++++ Y K A KVFD M KT+ +WN++++
Sbjct: 342 VGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLV 401
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G L+LA +F MP + VSW T+I + F+ AI + EM + + T+
Sbjct: 402 RDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVG 461
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ ++C LG L K +++++ K + + + +L++M+++ GD + A VF+ M ++
Sbjct: 462 IASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRD 521
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFA 266
VS+W + + G A FD+M+++DV + +++ +S GY + +F
Sbjct: 522 VSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFW 581
Query: 267 NMLKDSSLKP 276
M K + P
Sbjct: 582 AMEKIHGVSP 591
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/704 (35%), Positives = 412/704 (58%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ + + G++ A +F+ + +D+++W ++I + + G + A++ F + +
Sbjct: 151 NALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLK 210
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + ++ S+LA+ LG L GK++H++ +K L + + N+L++MY+K A V
Sbjct: 211 PDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLV 270
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD +MI +D+++W ++IA Y+QN EAL
Sbjct: 271 FD-------------------------------KMINKDLISWTTVIAAYAQNNCHTEAL 299
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ ++ + D + STL AC+ L L K++H Y ++
Sbjct: 300 KLLRK-VQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLK---------------- 342
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
G+S +++ ++D Y G+I A R+F+S++ +DVV+WT+
Sbjct: 343 ----------------RGLS--DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTS 384
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y NGL +A+ +F M +P++ TL ++LS ++SL++L+ GK+IH R G
Sbjct: 385 MISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKG 444
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S N+L+ MY+ G++ A +VF + + V WT+MI A HG G+ A++LF
Sbjct: 445 FMLEGSTVNSLVDMYACCGSLENAYKVF-ICTRSKSLVLWTTMINAYGMHGRGKAAVELF 503
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M + + PDHIT++ +L AC+H GL+ +G+R MK ++++P P H+A +VDLLGR
Sbjct: 504 SIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGR 563
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
A L+EAY+F+++M +EP W + L ACR+H N LG+IAA+KLL ++PD+ G+Y +
Sbjct: 564 ANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLI 623
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N++++ G+W+D +R MK G+KK G SW+++ NKVH F V D HP+ IY K+
Sbjct: 624 SNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKL 683
Query: 683 AKIWDEI-KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
A+I +++ KE G+VP T VLH+V ++ K QML HSE+LAIA+GL+ST E T +RI KN
Sbjct: 684 AQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKN 743
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+ K + K +RE++VRDA+RFHHF+ G+CSC D+W
Sbjct: 744 LRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 226/479 (47%), Gaps = 84/479 (17%)
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT VL +C + D+ G ++H ++K G V V NSL++MYAK D + A+ +FD
Sbjct: 11 FTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDR 70
Query: 206 MRLKN-VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +N V SW NS+I+ YS NG EALG+
Sbjct: 71 MNERNDVVSW-------------------------------NSIISAYSLNGQCMEALGL 99
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M K + + + +TL + L AC + KLG +IHA I+++ V NAL++
Sbjct: 100 FREMQK-AGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAM-- 156
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+++ G + A RIFD L ++D + W +M+
Sbjct: 157 -------------------------------HVRFGKMSYAARIFDELDEKDNITWNSMI 185
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G+ QNGL +A++ F + KP+ +L ++L+ S L L +GK+IHA A+++
Sbjct: 186 AGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLD 245
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S+L + N LI MYSK + A VF+ + ++ +SWT++I A AQ+ EA++L +
Sbjct: 246 SNLRIGNTLIDMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAAYAQNNCHTEALKLLRK 304
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH--KIKPTPSHFA---SMVDL 559
+ G+ D + L AC+ G R + K VH +K S ++D+
Sbjct: 305 VQTKGMDVDTMMIGSTLLACS-------GLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDV 357
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL---DLGKIAAEKLLLIEPDN 615
G + A E++ + DVV+W S++S C VH L LG K +EPD+
Sbjct: 358 YADCGNINYATRMFESIKCK-DVVSWTSMIS-CYVHNGLANEALGVFYLMKETSVEPDS 414
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 39/317 (12%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D FT L AC +E + G +IH II+ +D+ V N+L+S YAK
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKC---------- 58
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAMLVGYEQNGLNKD 395
DI AR++FD + +R DVV+W +++ Y NG +
Sbjct: 59 -----------------------NDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCME 95
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
A+ LFR M + G N YTL A L + G +IHA+ L+S + + V+NAL+
Sbjct: 96 ALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVA 155
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
M+ + G ++ A R+F+ + ++ ++W SMI Q+GL EA+Q F + + +KPD +
Sbjct: 156 MHVRFGKMSYAARIFDELD-EKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEV 214
Query: 516 TYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+ + +L A G + G+ + MKN + +++D+ + + A +
Sbjct: 215 SLISILAASGRLGYLLNGKEIHAYAMKNW--LDSNLRIGNTLIDMYSKCCCVAYAGLVFD 272
Query: 575 NMPLEPDVVAWGSLLSA 591
M + D+++W ++++A
Sbjct: 273 KM-INKDLISWTTVIAA 288
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 179/403 (44%), Gaps = 97/403 (24%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA +K L ++ + N+L++ Y+K ++YA VFD+M K L SW T+++AYA+
Sbjct: 232 GKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQ 291
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
C A+++ ++ + + S
Sbjct: 292 NN-----CHT--------------------------EALKLLRKVQTKGMDVDTMMIGST 320
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C+ L LS K+VH + +K GLS + + N ++++YA G+ A +F+ ++ K+V
Sbjct: 321 LLACSGLRCLSHAKEVHGYTLKRGLSD-LMMQNMIIDVYADCGNINYATRMFESIKCKDV 379
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW ++S ++H NG EALG+F ++K+
Sbjct: 380 VSWTSMISCYVH-------------------------------NGLANEALGVFY-LMKE 407
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+S++PD TL S LSA A+L L GK+IH +I R F G N+L+ YA G +E
Sbjct: 408 TSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLEN 467
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A K +F R + +V WT M+ Y +G
Sbjct: 468 AYK---------------------------------VFICTRSKSLVLWTTMINAYGMHG 494
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
K AVELF M + P++ T A+L S ++ GK++
Sbjct: 495 RGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G +++T +L + + G +IH ++ G S + V+N+L++MY+K +I A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
R++F+ ++ R + VSW S+I A + +G EA+ LF M + G+ + T V L AC
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G + + +++ A +V + R G + A + + E D + W
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANA-LVAMHVRFGKMSYAARIFDELD-EKDNITWN 182
Query: 587 SLLSA 591
S+++
Sbjct: 183 SMIAG 187
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H I + G L NSL++ YA S+ A KVF K+L W T+++AY
Sbjct: 433 GKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGM 492
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
GR A E+F++M ++ D +++ ++ + G R+ M
Sbjct: 493 HGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETM 541
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/767 (34%), Positives = 409/767 (53%), Gaps = 97/767 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L+ S+N G+++H+ IIKCG + F+ L++ Y+K
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC----------------- 362
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G A VF + D V W+ +I ++ G+ + +I++F M
Sbjct: 363 --------------GLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRL 408
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
LP Q+T+ S+L++ T G+L G+ +H+ V K G V V+N+L+ MY K G
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG---- 464
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
V DG +L ++ M++RD+++WN+ ++G G
Sbjct: 465 --CVHDGTKL-------------------------YESMVDRDLISWNAYLSGLHDCGMY 497
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
L +F +ML++ + P+ +T S L +C+ L + G+Q+HA+II+ + D V A
Sbjct: 498 DRPLTIFYHMLEEGFI-PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTA 556
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI YAK Y++ D+ F+ L RD+
Sbjct: 557 LIDMYAKCM----------------------------YLEDADVA-----FNRLSVRDLF 583
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
WT ++ Y Q + A+ FR M +EG KPN +TL+ LS SSLASL+ G+Q+H+
Sbjct: 584 TWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMV 643
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+SG S + V +AL+ MY+K G + A +F + R++T++W ++I AQ+G G +A
Sbjct: 644 FKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQGNKA 702
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ F ML+ GI PD +T+ G+L+AC+H GLVE+G+ ++N M I PT H A MVD
Sbjct: 703 LTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVD 762
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+LGR G E +FI+ M L + + W ++L A ++H NL LG+ AA KL ++P+ +
Sbjct: 763 ILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESS 822
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N++++ G+W+D +R M GVKK G SWV+ +VH F D+ HPQ I
Sbjct: 823 YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEI 882
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+ K+ ++ E+ + +VP T VLH+V E K++ LR HSE+LA+ F LIST +RI
Sbjct: 883 HLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRI 942
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLR+C DCH +K I + ++EIVVRD RFHHFK G CSC D+W
Sbjct: 943 FKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 174/677 (25%), Positives = 299/677 (44%), Gaps = 146/677 (21%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L++Y+ +L+ R+ V K +H I+K ++ L SL+N YAK +YA+ V
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
+MP +RD VSWT +I G ++I +
Sbjct: 172 KMP-------------------------------DRDVVSWTALIQGLVAEGFANDSIYL 200
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F EM + ++P +FT+ + L +C+ L GK++H+ K GL + V ++L+++YAK
Sbjct: 201 FQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAK 260
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSM 248
G+ +A +F GM +N +WNV+++ + G + F M+E DV T ++
Sbjct: 261 CGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 249 IAG-----------------------------------YSQNGYDFEALGMFANMLK--- 270
+ G YS+ G +A+G+F + K
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380
Query: 271 ----------------DSSLK-----------PDKFTLASTLSACANLEKLKLGKQIHAY 303
+ S+K P+++T+ S LSA N L+ G+ IHA
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHAC 440
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ + F+ V NAL++ Y K G V K+
Sbjct: 441 VWKYGFETDVAVSNALVTMYMKNGCVHDGTKL---------------------------- 472
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
++S+ DRD+++W A L G G+ + +F M+ EG PN YT ++L S
Sbjct: 473 -----YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
L + +G+Q+HA +++ + V ALI MY+K + A FN + R + +WT
Sbjct: 528 CLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWT 586
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+I AQ GE+A+ F +M + G+KP+ T G L+ C+ +E GQ+ ++M V
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSM---V 643
Query: 544 HKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
K F +++VD+ + G ++EA E + + D +AW +++ C +N
Sbjct: 644 FKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII--CGYAQNGQGN 700
Query: 602 K-IAAEKLLL---IEPD 614
K + A +++L I PD
Sbjct: 701 KALTAFRMMLDEGISPD 717
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 222/522 (42%), Gaps = 102/522 (19%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+S+L C + L K +H +VK ++ ++ SL+N+YAK A
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYA--------- 166
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
RL LA+ M +RDVV+W ++I G G+ +++ +F M
Sbjct: 167 -----------------RLVLAK-----MPDRDVVSWTALIQGLVAEGFANDSIYLFQEM 204
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ + P++FTLA+ L AC+ L LGKQ+HA + VG+AL+ YA
Sbjct: 205 -QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA---- 259
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
K G+I A ++F + +++ V W +L GY
Sbjct: 260 -----------------------------KCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q G ++LF SM+ K N +TL+ +L ++ +L G+ IH+ ++ G +
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ L+ MYSK G A VF I + + V W+++I L Q G EE+I+LF M
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFHLMRLG 409
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNM--------------------MKNVHKIKP 548
P+ T +L+A T+ G ++ GQ + MKN +
Sbjct: 410 DTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKN-GCVHD 468
Query: 549 TPSHFASMVDL-----------LGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRV 594
+ SMVD L G+ +M E P++ + S+L +C
Sbjct: 469 GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528
Query: 595 HKNLDLGKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWEDA 635
++ G+ ++ + DN+ +AL ++Y+ C EDA
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 150/322 (46%), Gaps = 41/322 (12%)
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
SS K K+ +S L CA+ L + K IH I++ D P + +S
Sbjct: 107 SSKKKLKY-YSSMLRECASKRSLGVAKAIHGLIVK---DVINPDSHLWVS---------- 152
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
L++ Y K AR + + DRDVV+WTA++ G G
Sbjct: 153 --------------------LVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEG 192
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
D++ LF+ M EG PN +TL+ L S +LD GKQ+HA A + G L V +
Sbjct: 193 FANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGS 252
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ +Y+K G I A ++F + Q V+W ++ AQ G ++LF M+EL +K
Sbjct: 253 ALVDLYAKCGEIELASKMF-IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEA 569
+ T VL C + ++QGQ +++ + K + F +VD+ + GL +A
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSL---IIKCGYEGNEFIGCGLVDMYSKCGLAIDA 368
Query: 570 YNFIENMPLEPDVVAWGSLLSA 591
+ + +PD+V W +L++
Sbjct: 369 IGVFKTIK-KPDIVVWSALITC 389
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/731 (36%), Positives = 396/731 (54%), Gaps = 92/731 (12%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMP------NRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+N +LS YA+ G +D A +F D V+W T+I + GR A+ + +
Sbjct: 213 FNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYD 272
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVG 194
MV V P T S L +C+ L L+ G+++H+ V+K L+ V ++L++MYA G
Sbjct: 273 MVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYA--G 330
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE--RDVVTWNSMIAGY 252
+E +A A R FD + E R + WN+MI GY
Sbjct: 331 NEKVASA-----------------------------RRVFDMVPEPSRQLGMWNAMICGY 361
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+Q G D EAL +F+ M ++ P + T++ L ACA E + +H Y+++
Sbjct: 362 AQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGN 421
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V NAL+ YA++G +++A+ RIF +
Sbjct: 422 RFVQNALMDMYARLGEMDVAR---------------------------------RIFAMI 448
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSM------------VREGPK----PNNYTLS 416
RDVV+W ++ G G +A +L M EG PNN TL
Sbjct: 449 DPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLM 508
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L ++LA+ GK+IH A+R S ++V +AL+ MY+K G + A+R VF+ + R
Sbjct: 509 TLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLP-R 567
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQR 535
+ ++W +I+A HGLG+EA+ LF+ M G P+ +T++ L AC+H GLV++G
Sbjct: 568 RNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLE 627
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM-PLEPDVVAWGSLLSACRV 594
++ M+ H +KPTP A +VD+LGRAG L EAY+ I +M P E V AW SLL ACR+
Sbjct: 628 LFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRL 687
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H+N++LG++AAE+L +EP + Y LCN+YS+ G W+ + +R M+ GV K G S
Sbjct: 688 HRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCS 747
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQML 714
W+++ +H F + HP ++ M +W+ ++ G+ PDT+ VLHDV+ED K ML
Sbjct: 748 WIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAML 807
Query: 715 RHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
R+HSEKLAIAFGL+ P +R+ KNLRVCNDCH A KF+ K+V R+IV+RD RFHHF
Sbjct: 808 RYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHF 867
Query: 775 KKGLCSCRDYW 785
+ G CSC DYW
Sbjct: 868 RDGSCSCGDYW 878
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 215/487 (44%), Gaps = 91/487 (18%)
Query: 31 VGKLVHARIIK-CGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM--PVKTLCSWNTILS 87
+G+ +HA ++K L + F+ ++L++ YA E ++ A++VFD + P + L WN ++
Sbjct: 300 LGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMIC 359
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
YA+ G + A E+F+ M + P++ T
Sbjct: 360 GYAQAGMDEEALELFSRME------------------------------AEAGCAPSETT 389
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
++ VL +C + + +H +VVK G++G V N+L++MYA++G+ +A+ +F +
Sbjct: 390 MSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMID 449
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++V SWN +++ + G A F + E + + + + ++ G +
Sbjct: 450 PRDVVSWNTLITGCVVQGH---AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCM----- 501
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
P+ TL + L CA L GK+IH Y +R ++ VG+AL+ YAK G
Sbjct: 502 --------PNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCG 553
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ +R +FD L R+V+ W +++ Y
Sbjct: 554 C---------------------------------LAASRAVFDRLPRRNVITWNVLIMAY 580
Query: 388 EQNGLNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRSGEAS 445
+GL +AV LF M G PN T A L+ S +D G ++ H G
Sbjct: 581 GMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKP 640
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQH---GLGEEAIQL 501
+ + ++ + +AG ++ A + + ++ VS W+S++ A H LGE A
Sbjct: 641 TPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAA-- 698
Query: 502 FERMLEL 508
ER+ EL
Sbjct: 699 -ERLFEL 704
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 182/394 (46%), Gaps = 70/394 (17%)
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL---EKLKL 296
RD V++NS+I+ AL +ML + FTL S L AC++L + +L
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190
Query: 297 GKQIHAYIIRTEFDATG----PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
G++ HA+ ++ F G P NAL+S YA++G V+ AQ + + ++
Sbjct: 191 GREAHAFALKRGFLDEGRERFPF-NALLSMYARLGLVDDAQSLFRTTAAAF--------- 240
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
S DVV W M+ Q G +AVE+ MV G +P+
Sbjct: 241 ------------------SPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDG 282
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS-VSNALITMYSKAGNINAARRVFN 471
T ++ L S L L G+++HA L+ + ++ S V++AL+ MY+ + +ARRVF+
Sbjct: 283 VTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFD 342
Query: 472 LIHWRQETVS-WTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACT---- 525
++ + W +MI AQ G+ EEA++LF RM E G P T GVL AC
Sbjct: 343 MVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEG 402
Query: 526 -------HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
HG +V++G ++N +++D+ R G + A +
Sbjct: 403 FAGKEAMHGYVVKRGMAGNRFVQN------------ALMDMYARLGEMDVARRIFAM--I 448
Query: 579 EP-DVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
+P DVV+W +L++ C V + AAE L+
Sbjct: 449 DPRDVVSWNTLITGCVVQGH------AAEAFQLV 476
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 26/287 (9%)
Query: 30 FVGK-LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
F GK +H ++K G+ + F++N+LM+ YA+ + A+++F + + + SWNT+++
Sbjct: 403 FAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITG 462
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
QG A E F L+ S + + E G + +P T+
Sbjct: 463 CVVQGH---AAEAFQLVTEMQLPSPSPSSSSTTEEGE------------AHRCMPNNITL 507
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L C AL + GK++H + V+ L + V ++L++MYAK G ++AVFD +
Sbjct: 508 MTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPR 567
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIE-----RDVVTWNSMIAGYSQNGYDFEALG 263
+NV +WNV++ + G D A A FD+M + VT+ + +A S +G L
Sbjct: 568 RNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLE 627
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
+F M +D +KP L AC + G+ AY I T +
Sbjct: 628 LFHGMERDHGVKP-----TPDLHACVVDVLGRAGRLDEAYSIITSME 669
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P GK +H ++ L + + ++L++ YAK ++ ++ VFD +P + + +WN ++ A
Sbjct: 520 PARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMA 579
Query: 89 YAKQGRLDLACEVFNLM-------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ- 140
Y G D A +F+ M PN V++ + + G + +F M +D
Sbjct: 580 YGMHGLGDEAVALFDEMAAGGEATPN--EVTFIAALAACSHSGLVDRGLELFHGMERDHG 637
Query: 141 VLPT 144
V PT
Sbjct: 638 VKPT 641
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 115/274 (41%), Gaps = 56/274 (20%)
Query: 434 IHASALRSG--EASSLSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALA 490
+HA+ALR S +V NAL+T Y++ G+++AA +F ++ VS+ S+I AL
Sbjct: 85 LHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALC 144
Query: 491 QHGLGEEAIQLFERMLELGIKP-DHITYVGVLTACTH--------------------GGL 529
E A+ ML G T V VL AC+H G L
Sbjct: 145 LFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFL 204
Query: 530 VEQGQRY-YNMMKNVHK-----------IKPTPSHFA----------SMVDLLGRAGLLQ 567
E +R+ +N + +++ + T + F+ +M+ LL + G
Sbjct: 205 DEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCA 264
Query: 568 EAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD---NSGAYSA 621
EA + +M + PD V + S L AC + L LG+ ++L + D NS SA
Sbjct: 265 EAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGR-EMHAVVLKDADLAANSFVASA 323
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
L ++Y+ E A+ R+ V Q W
Sbjct: 324 LVDMYAGN---EKVASARRVFDMVPEPSRQLGMW 354
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/599 (41%), Positives = 361/599 (60%), Gaps = 57/599 (9%)
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ +FD M N SWN +VS ++ +G + AR FD+M ER+VV+W +MI GY Q G
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
EA +F M P++ ++ T+ +E
Sbjct: 73 EEAELLFWRM-------PERNVVSWTVMLGGLIED------------------------- 100
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
G V+ A+++ + + +V+A T ++DG G + AR IFD + R+VV
Sbjct: 101 --------GRVDEARQLFDMMPVK--DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVV 150
Query: 379 AWTAMLVG-------------YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
AWT+M+ G YE+ G +A+ LF M REG +P+ ++ ++LSV SL
Sbjct: 151 AWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSL 210
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
ASLDHG+Q+H+ +RS + VS+ LITMY K G++ A+RVF+ ++ V W S+
Sbjct: 211 ASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFS-SKDIVMWNSI 269
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I AQHG GE+A+++F M I PD IT++GVL+AC++ G V++G + MK+ ++
Sbjct: 270 IAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQ 329
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
+ P H+A MVDLLGRAG L EA N IENMP+E D + WG+LL ACR HKNLDL +IAA
Sbjct: 330 VDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAA 389
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
+KLL +EP+N+G Y L NLYSS +W+D +RK+M+ ++K+ G SW+++ KVH+F
Sbjct: 390 KKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIF 449
Query: 666 -GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
G HP+ + I K+ K+ ++E G+ PD + V+HDV+E+ K LR HSEKLA+A
Sbjct: 450 SGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVA 509
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+GL+ PE +R+MKNLRVC D HS IK I ++ REI++RD RFHHFK GLCSC D
Sbjct: 510 YGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 201/452 (44%), Gaps = 87/452 (19%)
Query: 55 MNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
M Y + + A+K+FD+MP SWN ++S Y + G + A +VF+ MP R+ VSWT
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I Y + G + A +F M + V+ +TV LG L +V
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVV--SWTVM--------LGGLIEDGRV------- 103
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
DE A+ +FD M +K+V + ++ GRL AR F
Sbjct: 104 --------------------DE--ARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIF 141
Query: 235 DQMIERDVVTWNSMIAG-------------YSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
D+M +R+VV W SMI+G Y + G++ EAL +F+ M ++ ++P ++
Sbjct: 142 DEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQRE-GVRPSFPSV 200
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
S LS C +L L G+Q+H+ ++R++FD V + LI+ Y K G
Sbjct: 201 ISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCG-------------- 246
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
D+ A+R+FD +D+V W +++ GY Q+G + A+E+F
Sbjct: 247 -------------------DLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 287
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKA 460
M P+ T +LS S + G +I S + + A ++ + +A
Sbjct: 288 DMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRA 347
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
G +N A + + + + W +++ A H
Sbjct: 348 GKLNEAMNLIENMPVEADAIVWGALLGACRTH 379
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 62/291 (21%)
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
GY + AR++FD + + + ++W ++ GY QNG+ +A ++F M P+ N +
Sbjct: 3 GYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM----PERNVVS 58
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+AM I Y + G I A +F
Sbjct: 59 WTAM-----------------------------------IRGYVQEGLIEEAELLF---- 79
Query: 475 WR---QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA-CTHGGLV 530
WR + VSWT M+ L + G +EA QLF+ M +K D + ++ C+ G L+
Sbjct: 80 WRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMM---PVK-DVVASTNMIDGLCSEGRLI 135
Query: 531 EQGQRYYNM-MKNVHKIKPTPS------HFASMVDLLGRAGLLQEA---YNFIENMPLEP 580
E + + M +NV S +++M+ + R G EA ++ ++ + P
Sbjct: 136 EAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRP 195
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCG 630
+ S+LS C +LD G+ +L+ + D + S L +Y CG
Sbjct: 196 SFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCG 246
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ PS+IS L L + G+ VH+++++ + +++ + L+ Y K
Sbjct: 195 PSFPSVISVLSVCGSLASLDH-------GRQVHSQLVRSQFDIDIYVSSVLITMYIKCGD 247
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ AK+VFD K + WN+I++ YA+ G + A EVF+ M + D +++ ++
Sbjct: 248 LVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSA 307
Query: 120 YNEIGRFKNAIRMFVEM 136
+ G+ K + +F M
Sbjct: 308 CSYTGKVKEGLEIFESM 324
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 267/786 (33%), Positives = 432/786 (54%), Gaps = 103/786 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKC--GLHLSVFLKNSLMNFYAKT 61
PN S SPL+ LL+ + ++N VGK +H+ +I S+ NSL+NFYAK
Sbjct: 21 PNAVSPSSPLDLIK-LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKV 79
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+S A +FD MP + + SW+ +++ Y G F+L
Sbjct: 80 NQVSIAHNLFDRMPERNVVSWSALMTGYLLNG--------FSL----------------- 114
Query: 122 EIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
IR+ +M+ + V P ++ + ++SC G + G++ H ++KTG S
Sbjct: 115 ------KVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHN 168
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V N+L++MY+K V D M + WN ++
Sbjct: 169 YVRNALVSMYSK------CSIVQDAMGV-----WN--------------------EVPVN 197
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
D+V +NS+++ +NGY E L + +M+ + S+K DK T + S CA+L+ L+LG +
Sbjct: 198 DIVAYNSILSSLVENGYLREGLEVLRSMVSE-SVKWDKVTFVNAFSLCASLKDLRLGLHV 256
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H ++ ++ + V +A+I+ Y K G +L+
Sbjct: 257 HGKMLTSDVECDAYVSSAIINMYGKCG----------------------KSLM------- 287
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
AR +FD L+ R+VV WTA++ QNG ++A+ LF M +E K N +T + +L+
Sbjct: 288 ----ARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLN 343
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQET 479
+ L++ +G +H + +SG + V NALI MY+K+G+I AA++VF +++H ++
Sbjct: 344 ACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMH--RDI 401
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
++W +MI + HGLG++A+ +F+ ML P+++T+ GVL+AC H GLV++G Y +
Sbjct: 402 ITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHH 461
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+ ++P H+ +V LL + G L EA NF+ P++ DVVAW +LL+AC VH+N
Sbjct: 462 LMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYG 521
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ AE +L ++P++ G Y+ L N+Y+ +W+ +RK M+ +KK G SW++I
Sbjct: 522 LGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIG 581
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
N H+F ED HP Y K+ ++ IK +G+ PD +VLHDVE++ KE L +HSE
Sbjct: 582 NVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSE 641
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIA+GL+ P ++ ++KNLR+C+DCHSA++ I K+ +R IVVRDA RFHHF+ G C
Sbjct: 642 KLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRC 701
Query: 780 SCRDYW 785
SC DYW
Sbjct: 702 SCLDYW 707
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 153/329 (46%), Gaps = 40/329 (12%)
Query: 268 MLKDSSLKPDK-FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV--GNALISCYA 324
+L+ +++ P L L A+ + LK+GK IH+++I T + N+LI+ YA
Sbjct: 18 LLRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYA 77
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
KV V IA + ++ + +R+VV+W+A++
Sbjct: 78 KVNQVSIAHNLFDR---------------------------------MPERNVVSWSALM 104
Query: 385 VGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
GY NG + + L + M+ EG PN Y L+ +S ++ G+Q H L++G
Sbjct: 105 TGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGF 164
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V NAL++MYSK + A V+N + + V++ S++ +L ++G E +++
Sbjct: 165 SFHNYVRNALVSMYSKCSIVQDAMGVWNEVP-VNDIVAYNSILSSLVENGYLREGLEVLR 223
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M+ +K D +T+V + C + G + M ++ ++++++ G+
Sbjct: 224 SMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKML-TSDVECDAYVSSAIINMYGKC 282
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G A + + +VV W +++++C
Sbjct: 283 GKSLMARGVFDGLQ-SRNVVLWTAVMASC 310
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 266/726 (36%), Positives = 411/726 (56%), Gaps = 68/726 (9%)
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ +SYA +F+ + L WNT+ +A N DSV+
Sbjct: 13 DGLSYAISIFETIQEPNLLIWNTMFRGHA---------------LNSDSVT--------- 48
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
A++++V M+ +LP ++ +L SC L G+++H V+K G +
Sbjct: 49 -------ALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMY 101
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V SL++MYA+ G A VFD ++V S+ +++ + G ++ AR FD++ +D
Sbjct: 102 VNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKD 161
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
VV+WN+MI+GY + EAL ++ +M+K +++KPD+ T+ + +SACA ++LG+Q+H
Sbjct: 162 VVSWNAMISGYVETCNFKEALELYKDMMK-TNVKPDESTMVTVVSACAQSGSIELGRQLH 220
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
++I F S I +NV L+D Y K G+
Sbjct: 221 SWIEDHGFG----------------------------SNIKIVNV-----LIDLYSKCGE 247
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A +F L +DV++W ++ G+ L K+A+ LF+ M+R G PN+ T+ ++L
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307
Query: 422 SSSLASLDHGKQIHASALR--SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
+ L ++D G+ IH + G ++ S+ +LI MY+K G+I AA++VF+ + R +
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 367
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
SW +MI A HG A LF +M + GI PD IT+VG+L+AC+H G+++ G+ +
Sbjct: 368 -SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRS 426
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M +KI P H+ M+DLLG GL +EA I MP+EPD V W SLL AC++H N++
Sbjct: 427 MSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVE 486
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ A+ L+ IEP+N G+Y L N+Y++ G+W+ A IR + G+KK G S ++I
Sbjct: 487 LGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEID 546
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+ VH F + D HP+ IY + ++ ++E GFVPDT+ VL ++EE+ KE LRHHSE
Sbjct: 547 SVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSE 606
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGLIST T L I+KNLRVC +CH A K I K+ REI+ RD TR H K G+
Sbjct: 607 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVW 666
Query: 780 SCRDYW 785
SC DYW
Sbjct: 667 SCHDYW 672
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 254/550 (46%), Gaps = 101/550 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G L +++ SL++ YA+ + A KVFD
Sbjct: 68 FPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSS 127
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G ++ A ++F+ + +D VSW +I Y E FK A+ ++ +
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +V+++C G + G+++HS++ G + + N L+++Y+K G+
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F G+ K+V SWN ++ H H N
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTH------------------------------MN 277
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
Y EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI +
Sbjct: 278 LYK-EALLLFQEMLR-SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINK--------- 326
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
++ GV A ++ T+L+D Y K GDI A+++FDS+ R
Sbjct: 327 ---------RLKGVTNASSLL-------------TSLIDMYAKCGDIEAAKQVFDSMLTR 364
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ +W AM+ G+ +G A +LF M + G P++ T +LS S LD G+ I
Sbjct: 365 SLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIF 424
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
S + + + L H + MI L GL
Sbjct: 425 RSMSQDYKITP------------------------KLEH-------YGCMIDLLGHCGLF 453
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP-TPSHFA 554
+EA ++ M ++PD + + +L AC VE G+ Y +N+ KI+P P +
Sbjct: 454 KEAKEMIRTM---PMEPDGVIWCSLLKACKMHNNVELGESY---AQNLIKIEPENPGSYV 507
Query: 555 SMVDLLGRAG 564
+ ++ AG
Sbjct: 508 LLSNIYATAG 517
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 231/458 (50%), Gaps = 43/458 (9%)
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
H L A + F+ + E +++ WN+M G++ N AL ++ M+ L P+ ++
Sbjct: 11 HFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMI-SLGLLPNSYSFP 69
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
L +CA + L G+QIH ++++ +D V +LIS YA+ G +E A K+ ++S S
Sbjct: 70 FLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRS--S 127
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
+ +V+++T L+ GY G I AR++FD + +DVV+W AM+ GY + K+A+EL++
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M++ KP+ T+ ++S + S++ G+Q+H+ G S++ + N LI +YSK G
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A +F + +++ +SW ++I L +EA+ LF+ ML G P+ +T + VL
Sbjct: 248 VETACGLFQGLA-KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 306
Query: 523 ACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM----- 576
AC H G ++ G+ + + K + + S S++D+ + G ++ A ++M
Sbjct: 307 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366
Query: 577 -----------------------------PLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
++PD + + LLSAC LDLG+
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRS 426
Query: 608 L---LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+ I P Y + +L CG +++A + ++M
Sbjct: 427 MSQDYKITPKLE-HYGCMIDLLGHCGLFKEAKEMIRTM 463
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/702 (37%), Positives = 399/702 (56%), Gaps = 66/702 (9%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
++ Y+ G + A +VF+ + +D VSWT ++ Y E F+ ++++F M P
Sbjct: 185 ALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKP 244
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
FT SVL +C L + GK VH GC T+ L ++ VG E+
Sbjct: 245 NNFTFASVLKACVGLEVFNVGKAVH---------GCAFKTSYLEELF--VGVEL------ 287
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+ L+I SG +D A F++M + DV+ W+ MIA Y+Q+ EA+
Sbjct: 288 --------------IDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIE 333
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
MF M + L P++FTLAS L ACA+L L+LG QIH ++++ D
Sbjct: 334 MFCRMRRGLVL-PNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLD------------- 379
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+NV L+D Y K G + + ++F + V+W +
Sbjct: 380 --------------------MNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTV 419
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+VGY Q G + A+ LF+ M+ + T S++L + +A+L+ G QIH+ ++++
Sbjct: 420 IVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIY 479
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V NALI MY+K GNI AR VF+++ + VSW +MI + HGL EA++ FE
Sbjct: 480 DKNTVVGNALIDMYAKCGNIKDARLVFDMLR-EHDQVSWNAMISGYSVHGLYGEALKTFE 538
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
MLE KPD +T+VG+L+AC++ GL+++GQ Y+ M + I+P H+ MV LLGR+
Sbjct: 539 SMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRS 598
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L +A + +P EP V+ W +LLSAC +H +++LG+I+A+++L IEP++ + L
Sbjct: 599 GHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLS 658
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y++ +W + A+IR SMK G++K G SW++ Q +VH F V D HP I +
Sbjct: 659 NIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLE 718
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ + + G+VPD +SVL DVE+ KEQ L HSE+LA+A+GLI TP + LRI+KNLR
Sbjct: 719 WLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLR 778
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+C DCH+AIK I K+V R+I++RD RFHHF +G+CSC DYW
Sbjct: 779 ICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 265/581 (45%), Gaps = 101/581 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LLQS +++ + GK +H IIK G L +F N L+NFY K +S+ A K+
Sbjct: 47 YGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKL----- 101
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
F+ MP+R++VS+ T+I Y++ RF AI +F
Sbjct: 102 --------------------------FDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSR 135
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ + F ++VL + G VH+ V K G V +L++ Y+ G
Sbjct: 136 LQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGY 195
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD + K++ V+W M+A Y +N
Sbjct: 196 AECARQVFDAIEYKDM-------------------------------VSWTGMVACYVEN 224
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
E+L +F+ M + KP+ FT AS L AC LE +GK +H +T + V
Sbjct: 225 ECFEESLKLFSRM-RIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G LI Y K GD+ A ++F+ +
Sbjct: 284 GVELIDLYIKS---------------------------------GDVDDALQVFEEMPKD 310
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DV+ W+ M+ Y Q+ +++A+E+F M R PN +TL+++L +SL L G QIH
Sbjct: 311 DVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIH 370
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
++ G ++ VSNAL+ MY+K G + + ++F+ VSW ++IV Q G G
Sbjct: 371 CHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP-NCTDVSWNTVIVGYVQAGNG 429
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFA 554
E+A+ LF+ MLE ++ +TY VL AC +E G + +++ +K ++ +
Sbjct: 430 EKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN-- 487
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+++D+ + G +++A + +M E D V+W +++S VH
Sbjct: 488 ALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVH 527
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 65/303 (21%)
Query: 9 LISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
L+ P +F A LLQ+ + +G +H ++K GL ++VF+ N+LM+ YAK
Sbjct: 342 LVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKC------ 395
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
GR++ + ++F+ PN VSW T+IV Y + G +
Sbjct: 396 -------------------------GRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGE 430
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+ +F +M++ QV T+ T +SVL +C + L G ++HS VKT V N+L+
Sbjct: 431 KALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALI 490
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+MYAK G+ A+ VFD +R + SWN +
Sbjct: 491 DMYAKCGNIKDARLVFDMLREHDQVSWN-------------------------------A 519
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
MI+GYS +G EAL F +ML ++ KPDK T LSAC+N L G+ ++
Sbjct: 520 MISGYSVHGLYGEALKTFESML-ETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVE- 577
Query: 308 EFD 310
E+D
Sbjct: 578 EYD 580
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 152/337 (45%), Gaps = 51/337 (15%)
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
L++ A LL+ Y+K + A ++FD + DR+ V++ ++ GY Q +A+ LF +
Sbjct: 77 LDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRL 136
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
EG + N + S +L + S G +HA + G S V ALI YS G
Sbjct: 137 QGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYA 196
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
AR+VF+ I ++ + VSWT M+ ++ EE+++LF RM +G KP++ T+ VL A
Sbjct: 197 ECARQVFDAIEYK-DMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKA 255
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHF------ASMVDLLGRAGLLQEAYNFIENMP 577
C G +N+ K VH S+ ++DL ++G + +A E MP
Sbjct: 256 CV-------GLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP 308
Query: 578 LEPDVVAW-----------------------------------GSLLSACRVHKNLDLGK 602
+ DV+ W SLL AC +L LG
Sbjct: 309 -KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGN 367
Query: 603 IAAEKLLLIEPD-NSGAYSALCNLYSSCGKWEDAANI 638
++ + D N +AL ++Y+ CG+ E++ +
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQL 404
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 281/761 (36%), Positives = 426/761 (55%), Gaps = 56/761 (7%)
Query: 29 PFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF--DEMPVKTLCSWNTI 85
P VG KL+ +I+ LSV + + T S+ +F ++ + T N +
Sbjct: 4 PIVGAKLLTTKILPFSFQLSVSIVRT-------TSSLISYICLFGTKKLSILTTPPSNYL 56
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPT 144
LS + + GR+D A +FN M + +T +I Y + GR ++A+++F EM V+D +
Sbjct: 57 LSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLI--- 113
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ S+L C GDL+ + + + + + N LL + G +A+ +F
Sbjct: 114 --SWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLL----EFGRVEVAECLFR 167
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M K+V++WN +V +GR++ A F++M R+V++W S+I G NG FEAL +
Sbjct: 168 VMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVV 227
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F ML +S K TLA L+ACAN+ +G QIH I++T + + +LIS YA
Sbjct: 228 FHKML--ASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYA 285
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K+++ A IF+ R+VV WTA+L
Sbjct: 286 NC-------KLIDN--------------------------ASSIFNDNVSRNVVVWTALL 312
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY N + DA+++F+ M+R PN +L++ L+ L ++D G+++HA A + G
Sbjct: 313 TGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLE 372
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S + VSN+L+ MY+K G+IN VF + R+ VSW S+IV AQHG G A+ LF +
Sbjct: 373 SDIFVSNSLVVMYTKCGHINDGIAVFTRMS-RKNVVSWNSIIVGCAQHGFGRWALTLFAQ 431
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M+ + PD IT G+L+AC H G++ +G+ ++ I+ T H++SMVDLLGR G
Sbjct: 432 MIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYG 491
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L+EA I MP + + + W +LLS+ H N+ + + AA+ +L ++P+ S AY+ L N
Sbjct: 492 QLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSN 551
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY+S GKW + + IRK MK G+ K G SW+ I+ H F D HP IY K+
Sbjct: 552 LYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEW 611
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++KE+G+VPD HDVE + KE+ML +HSE+LAI FGLIST E +T+ +MKNLR+
Sbjct: 612 LGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRI 671
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+A+K K+V REIVVRD +RFHHF G CSC DYW
Sbjct: 672 CGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/722 (36%), Positives = 395/722 (54%), Gaps = 48/722 (6%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+D+V W + E + AI +F EM V +T VL +C G L G+ V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H++ +K L V L MYA+ D A V D M +V WN VV+ G +
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 238
Query: 228 D----LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
D LA E +V TWN++++G S++G D EALG+ A+MLK L+PD T++S
Sbjct: 239 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK-QGLRPDATTVSS 297
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L + AN L+ G +IH + +R + + G AL+ YAK G ++ AQK+++ + +
Sbjct: 298 LLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLD--ALEH 355
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLNKDAVEL 399
N+ + +L+ GY G A + + ++ D D+ W ++ GY NG + AV L
Sbjct: 356 RNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLL 415
Query: 400 FRS-----------------------------------MVREGPKPNNYTLSAMLSVSSS 424
R M ++G +P+ T+S +L +
Sbjct: 416 LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAG 475
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
LA GK++H ALR + VS ALI MYSK G++ +A+ +F I ++ V +
Sbjct: 476 LALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQ-QKNLVLCNA 534
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
M+ LA HG G EAI+LF M G+KPD IT+ +LTAC GLV +G Y++ M+ +
Sbjct: 535 MLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKY 594
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+KPT ++A MVDLL R G L EA +FIE P++P WG+LL+ C +H NL L ++A
Sbjct: 595 GVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVA 654
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
A L ++EP NS Y + NLY +++A +++ +MK GV G+SW+QI+ +HV
Sbjct: 655 ARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHV 714
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V+ HP+ IY ++ ++ +IK+ G+VPDT+ + ++V+E+ KE++L H+EKLAI
Sbjct: 715 FEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAIT 774
Query: 725 FGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+GLI S +R+MKN R+CNDCH K I L DR+I++RDA RFHHF G CSC D
Sbjct: 775 YGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCND 834
Query: 784 YW 785
YW
Sbjct: 835 YW 836
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 236/541 (43%), Gaps = 110/541 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +K L + L YA+ ++ A +V D M ++ WN +++ A+
Sbjct: 175 GRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCAR 234
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G +D A E+ M P + +W T++ + GR + A+ + M++ + P T
Sbjct: 235 LGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATT 294
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
V+S+L S G L G ++H F ++ L V +L++MYAK G A+ V D +
Sbjct: 295 VSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALE 354
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALG 263
+N+++WN +V+ + ++GR D+A + M ++ D+ TWN +I GYS NG +A+
Sbjct: 355 HRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVL 414
Query: 264 M----------------------------------FANMLKDSSLKPDKFTLASTLSACA 289
+ F + ++ ++P T++ L ACA
Sbjct: 415 LLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACA 474
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L K GK++H + +R +D V ALI Y+K GG ++ K+
Sbjct: 475 GLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSK-GGSLVSAKV-------------- 519
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
IF+S++ +++V AML G +G ++A+ELF M G K
Sbjct: 520 ------------------IFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLK 561
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P++ T +A+L+ S+ + G + S M +K G
Sbjct: 562 PDSITFTALLTACRSMGLVTEGWEYFDS------------------METKYGV------- 596
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-HGG 528
+ T ++ M+ LA+ G +EA+ ER I P + +LT C+ HG
Sbjct: 597 ------KPTTENYACMVDLLARCGYLDEAMDFIERS---PIDPGASHWGALLTGCSIHGN 647
Query: 529 L 529
L
Sbjct: 648 L 648
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 60/274 (21%)
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASL-----DH------GKQIHASALRSGEASSLSVS 450
+ +R G P Y+ ++S+ A L DH Q+H+ A+R+G + V+
Sbjct: 33 AALRTGVPP--YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVT 90
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQE-----TVSWTSMIVALAQHGLGEEAIQLFERM 505
AL+ + ++ G + R L+H E V W + LA+ +EAI +F M
Sbjct: 91 CALVDLLARLGRGPSCAR---LLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREM 147
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYY----NMMKNVHKIKPTPSHFASM----- 556
G+ D T VL AC G + +G+ + + + H + P A M
Sbjct: 148 QARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPL--VPGFLAGMYAENA 205
Query: 557 --------VDLLG---------------RAGLLQEAYNFIENMPL---EPDVVAWGSLLS 590
+D +G R GL+ +A M EP+V W ++LS
Sbjct: 206 DVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLS 265
Query: 591 ACRVH--KNLDLGKIAAEKLLLIEPDNSGAYSAL 622
C H LG +A+ + PD + S L
Sbjct: 266 GCSRHGRDREALGVVASMLKQGLRPDATTVSSLL 299
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/651 (39%), Positives = 379/651 (58%), Gaps = 15/651 (2%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + S L SC A + +H+ V +GL+ V +SLL+ Y ++G A++V
Sbjct: 18 PDPHLLPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYD 258
FD M KNV W+ +++ + G + A +QM +E +V+TWN +++G +++G
Sbjct: 75 FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA 134
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
+A+ M + PD ++ LSA +++++ +GKQ+H Y+++ V A
Sbjct: 135 LDAVTALVRMHSEGFF-PDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTA 193
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR--- 375
LI Y K G + ++ +S S+++V + L+ G + + A +F R
Sbjct: 194 LIDMYGKCGRADEIVRVFHES--SHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVE 251
Query: 376 -DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+VV+WT+++ QNG + +AV+LFR+M G +PN+ T+ +L +++A+L HG+
Sbjct: 252 LNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSA 311
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +LR G + V +AL+ MY+K G AR +F+ + R VSW +MI A HG
Sbjct: 312 HCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRN-VVSWNAMIGGYAMHGD 370
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
A+QLF M + KPD +T+ VL AC+ GL E+G+RY+N M+ H I P H+A
Sbjct: 371 AANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYA 430
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MV LLGR+G L EAY+ I MP EPD WGSLL +CRV+ N+ L ++AAEKL +EP
Sbjct: 431 CMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPG 490
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L N+Y+S W+ +R MK +G+KK +G SW++I+NKVH+ D HP
Sbjct: 491 NAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPM 550
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
AI K+ ++ E+ +GF P VLHDVEE K+ +L HSEKLA+A GLIST T
Sbjct: 551 MTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGT 610
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR++KNLR+C DCH A+KFI REI VRD RFHHFK G CSC DYW
Sbjct: 611 PLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 207/429 (48%), Gaps = 23/429 (5%)
Query: 18 HLLQSNLKS--RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
HLL S LKS P + + +HA + GL F+ +SL++ Y + + A+ VFD MP
Sbjct: 21 HLLPSALKSCPAQP-LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMP 79
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNA 129
K + W+ +++ Y+ +G + A + M PN ++W ++ N GR +A
Sbjct: 80 EKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPN--VITWNGLVSGLNRSGRALDA 137
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ V M + P V+ L++ + ++S GK+VH +VVK G V +L++M
Sbjct: 138 VTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDM 197
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTW 245
Y K G VF +V+S N +V+ + ++ A F + I E +VV+W
Sbjct: 198 YGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSW 257
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
S++A QNG D EA+ +F M + ++P+ T+ L A AN+ L G+ H + +
Sbjct: 258 TSIVACCVQNGRDLEAVDLFRTM-QSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSL 316
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R F VG+AL+ YAK G A+ I + + NV+++ ++ GY GD A
Sbjct: 317 RKGFLHDVYVGSALVDMYAKCGKARHARTIFD--AMPSRNVVSWNAMIGGYAMHGDAANA 374
Query: 366 RRIFDSL----RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLS 420
++F S+ + D+V +T +L Q GL ++ F M + G P + M++
Sbjct: 375 VQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVT 434
Query: 421 VSSSLASLD 429
+ LD
Sbjct: 435 LLGRSGKLD 443
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/713 (35%), Positives = 395/713 (55%), Gaps = 69/713 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
CS + +L R +L + D SW ++I G A+ F M +
Sbjct: 10 FCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK 69
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ PT+ + + +C++L D+ +GK+ H G + V+++L+ MY+ G
Sbjct: 70 LSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG---- 125
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+L+ AR FD++ +R++V+W SMI GY NG
Sbjct: 126 ---------------------------KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 259 FEALGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+A+ +F ++L D ++ D L S +SAC+ + L + IH+++I+ FD
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VGN L+ YAK G G + AR+IFD +
Sbjct: 219 SVGNTLLDAYAKGGE-------------------------------GGVAVARKIFDQIV 247
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP-NNYTLSAMLSVSSSLASLDHGK 432
D+D V++ +++ Y Q+G++ +A E+FR +V+ N TLS +L S +L GK
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IH +R G + V ++I MY K G + AR+ F+ + + SWT+MI H
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G +A++LF M++ G++P++IT+V VL AC+H GL +G R++N MK ++P H
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+ MVDLLGRAG LQ+AY+ I+ M ++PD + W SLL+ACR+HKN++L +I+ +L ++
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
N G Y L ++Y+ G+W+D +R MK G+ K GFS +++ +VHVF + D H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQR+ IY +A++ ++ E G+V +T+SV HDV+E+ KE LR HSEKLAIAFG+++T
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVP 606
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T+ ++KNLRVC+DCH+ IK I K+VDRE VVRDA RFHHFK G CSC DYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 226/523 (43%), Gaps = 95/523 (18%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F GK H + G +F+ ++L+ Y+ + A+KVFDE+P + + SW +++ Y
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G A +F ++V N+ D + +
Sbjct: 153 DLNGNALDAVSLFK-----------DLLVDENDD--------------DDAMFLDSMGLV 187
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE--MMAKAVFDGMR 207
SV+++C+ + + +HSFV+K G V+V N+LL+ YAK G+ +A+ +FD +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K+ S+N ++S++ SG + A F ++++ VVT+N++
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI------------------- 288
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
TL++ L A ++ L++GK IH +IR + VG ++I Y K G
Sbjct: 289 ------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
VE A R+ FD +++++V +WTAM+ GY
Sbjct: 337 RVETA---------------------------------RKAFDRMKNKNVRSWTAMIAGY 363
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASS 446
+G A+ELF +M+ G +PN T ++L+ S G + +A R G
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L ++ + +AG + A + + + +++ W+S++ A H E A R+
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 507 ELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKP 548
EL + Y +L+ G + +R +MKN +KP
Sbjct: 484 EL--DSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKP 524
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 68/270 (25%)
Query: 26 SRNPFVG--KLVHARIIKCGLHLSVFLKNSLMNFYAK--TESISYAKKVFDEMPVKTLCS 81
SR P G + +H+ +IK G V + N+L++ YAK ++ A+K+FD++ K S
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 82 WNTILSAYAKQGRLDLACEVF-NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
+N+I+S YA+ G + A EVF L+ N+ +VT+N I
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNK--------VVTFNAI----------------- 288
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
T+++VL + + G L GK +H V++ GL V V S+++MY K G A+
Sbjct: 289 ------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR 342
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
FD M+ KNV S W +MIAGY +G+ +
Sbjct: 343 KAFDRMKNKNVRS-------------------------------WTAMIAGYGMHGHAAK 371
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACAN 290
AL +F M+ DS ++P+ T S L+AC++
Sbjct: 372 ALELFPAMI-DSGVRPNYITFVSVLAACSH 400
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/724 (36%), Positives = 417/724 (57%), Gaps = 36/724 (4%)
Query: 44 LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN 103
L V N + + + ++ A+++F MP ++ ++N +L+ Y+ GRL LA +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 104 LMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLS 162
+P D+ S+ T++ +A +F EM V+D V T +++S G +S
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLVS 148
Query: 163 AGKKVHSFVV---KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
+ H F + K +S N +L Y + G A+ +F+ +V SWN ++S
Sbjct: 149 LAR--HYFDLAPEKDAVS-----WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMS 201
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ G++ AR FD+M RDVV+WN M++GY++ G EA +F D++ D F
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRDVF 256
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG----NALISCYAKVGGVEIAQKI 335
T + +S A L+ +++ FDA NA+++ Y + ++ A+++
Sbjct: 257 TWTAVVSGYAQNGMLEEARRV--------FDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
+ NV ++ T+L GY + G + A+ +FD++ +D V+W AML Y Q G +++
Sbjct: 309 FNM--MPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEE 366
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
++LF M R G N + +LS + +A+L+ G Q+H +R+G V NAL+
Sbjct: 367 TLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLA 426
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MY K GN+ AR F + R + VSW +MI A+HG G+EA+++F+ M KPD I
Sbjct: 427 MYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 485
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T VGVL AC+H GLVE+G Y+ M + + P H+ M+DLLGRAG L EA++ +++
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 545
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EPD WG+LL A R+H+N +LG+ AAEK+ +EP+N+G Y L N+Y+S GKW DA
Sbjct: 546 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 605
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+R M+ GVKK GFSW+++QNKVH F D +HP+++ IY + + +K+ G+V
Sbjct: 606 RKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 665
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
T VLHDVEE+ KE ML++HSEKLA+A+G+++ P +R++KNLRVC DCH+A K
Sbjct: 666 SATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKAW 725
Query: 756 CKLV 759
+L+
Sbjct: 726 IELM 729
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H R+I+ G + F+ N+L+ Y K ++ A+ F+EM + + SWNT+++ YA+
Sbjct: 402 GMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYAR 461
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G A E+F++M D ++ ++ + G + I F M D F
Sbjct: 462 HGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD------FG 515
Query: 148 VTSVLASCTALGDL 161
VT+ T + DL
Sbjct: 516 VTAKPEHYTCMIDL 529
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/701 (36%), Positives = 394/701 (56%), Gaps = 66/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AY+ G + +A EVF+ + ++D VSWT +I +Y E F A+ F +M P
Sbjct: 87 LIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPN 146
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT VL +C L + AGK VH V+KT + V LL +Y + GD
Sbjct: 147 NFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGD--------- 197
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
N +W F M + DV+ W+ MI+ ++Q+G +AL +
Sbjct: 198 -----NDDAWRA-----------------FGDMPKNDVIPWSFMISRFAQSGQSEKALEI 235
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + + + P++FT +S L A A++E L L K IH + ++ V NAL++CYA
Sbjct: 236 FCQM-RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYA 294
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G +E + +F++L DR+ V+W ++
Sbjct: 295 KCGCIE---------------------------------QSMELFEALSDRNDVSWNTII 321
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
V Y Q G + A+ LF +M+R + T S++L ++LA+L+ G Q+H ++
Sbjct: 322 VSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYG 381
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
++V NALI MY+K G+I AR +F+++ R + VSW ++I + HGLG EAI++F
Sbjct: 382 QDVAVGNALIDMYAKCGSIKDARFMFDMLDLR-DKVSWNAIICGYSMHGLGVEAIKMFNL 440
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M E KPD +T+VGVL+AC++ G +++G++Y+ MK + I+P H+ MV L+GR+G
Sbjct: 441 MKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSG 500
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L +A FIE++P EP V+ W +LL AC +H +++LG+I+A+++L +EP + ++ L N
Sbjct: 501 NLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSN 560
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+ +W + A +RK MK GVKK G SW++ Q VH F V D H I +
Sbjct: 561 IYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEF 620
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ + ++ G+ P +VL DVE+D KE++L HSE+LA+AFGL+ P +RI+KNLR+
Sbjct: 621 LNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRI 680
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCHS IK I K+V R+I+VRD RFHHF+ G CSC DYW
Sbjct: 681 CVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 234/496 (47%), Gaps = 70/496 (14%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
VF+ MP R++VS+ T+I Y + +F A +F + + F T+VL ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
G+ VH V+K G + +L++ Y+ G MA+ VF
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVF----------------- 104
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
D++ +D+V+W MIA Y++N EAL F+ M + + KP+ FT
Sbjct: 105 --------------DEISSKDMVSWTGMIASYAENDCFSEALEFFSQM-RVAGFKPNNFT 149
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
A L AC L+ GK +H +++T ++ VG VG
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVG---------VG------------- 187
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
LL+ Y + GD A R F + DV+ W+ M+ + Q+G ++ A+E+F
Sbjct: 188 -----------LLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIF 236
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M R PN +T S++L S+ + SLD K IH AL++G ++ + VSNAL+ Y+K
Sbjct: 237 CQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKC 296
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G I + +F + R + VSW ++IV+ Q G GE A+ LF ML ++ +TY +
Sbjct: 297 GCIEQSMELFEALSDRND-VSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSI 355
Query: 521 LTACTHGGLVEQGQRYYNMM-KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
L AC +E G + + + K ++ + +++D+ + G +++A F+ +M
Sbjct: 356 LRACATLAALELGLQVHCLTAKTIYGQDVAVGN--ALIDMYAKCGSIKDA-RFMFDMLDL 412
Query: 580 PDVVAWGSLLSACRVH 595
D V+W +++ +H
Sbjct: 413 RDKVSWNAIICGYSMH 428
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 208/494 (42%), Gaps = 97/494 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L++ L +N GK VH ++K +++ L+ Y + A + F +MP
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ W+ ++S +A+ G+ + A E+ F +
Sbjct: 210 KNDVIPWSFMISRFAQSGQSEKALEI-------------------------------FCQ 238
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V+P QFT +SVL + + L K +H +K GLS V V+N+L+ YAK G
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +F+ + +N SWN + I Y Q
Sbjct: 299 IEQSMELFEALSDRNDVSWNTI-------------------------------IVSYVQL 327
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G AL +F+NML+ ++ + T +S L ACA L L+LG Q+H +T + V
Sbjct: 328 GDGERALSLFSNMLR-YQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAV 386
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GNALI YAK G ++ AR +FD L R
Sbjct: 387 GNALIDMYAKCGSIK---------------------------------DARFMFDMLDLR 413
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V+W A++ GY +GL +A+++F M KP+ T +LS S+ LD GKQ
Sbjct: 414 DKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYF 473
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
S + G + ++ + ++GN++ A + I + + W +++ A H
Sbjct: 474 TSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHND 533
Query: 495 GEEAIQLFERMLEL 508
E +R+LEL
Sbjct: 534 VELGRISAQRVLEL 547
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 190/442 (42%), Gaps = 81/442 (18%)
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS-SLKPDKFTLASTLSACANLE 292
FD+M ER+ V++ ++I GY+Q+ EA +FA + + L P F + L ++E
Sbjct: 3 FDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNP--FVFTTVLKLLVSME 60
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
+LG+ +H +++ + + +G ALI
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALI-------------------------------- 88
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
D Y G + AR +FD + +D+V+WT M+ Y +N +A+E F M G KPNN
Sbjct: 89 -DAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNN 147
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
+T + +L L + D GK +H S L++ L V L+ +Y++ G+ + A R F
Sbjct: 148 FTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGD 207
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT------- 525
+ + + + W+ MI AQ G E+A+++F +M + P+ T+ VL A
Sbjct: 208 MP-KNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDL 266
Query: 526 ----HG------------------------GLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
HG G +EQ + + + + + + S V
Sbjct: 267 SKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWN-TIIVSYV 325
Query: 558 DLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEP 613
L G + A + NM ++ V + S+L AC L+LG ++ I
Sbjct: 326 QL----GDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYG 381
Query: 614 DNSGAYSALCNLYSSCGKWEDA 635
+ +AL ++Y+ CG +DA
Sbjct: 382 QDVAVGNALIDMYAKCGSIKDA 403
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 64/293 (21%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
+ + P +F ++ +LQ++ + + K +H +K GL VF+ N+LM
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALM----------- 290
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
+ YAK G ++ + E+F + +R+ VSW TIIV+Y ++G
Sbjct: 291 --------------------ACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDG 330
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+ A+ +F M++ QV T+ T +S+L +C L L G +VH KT V V N+L
Sbjct: 331 ERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNAL 390
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK G A+ +FD + L++ SWN +
Sbjct: 391 IDMYAKCGSIKDARFMFDMLDLRDKVSWNAI----------------------------- 421
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
I GYS +G EA+ MF N++K++ KPD+ T LSAC+N +L GKQ
Sbjct: 422 --ICGYSMHGLGVEAIKMF-NLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/706 (35%), Positives = 405/706 (57%), Gaps = 78/706 (11%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ ++ A+ G L A +VF+ + + V WT +I Y + + A+ +F++ ++D
Sbjct: 192 SALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFE 251
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK--VGDEMMAK 200
P ++T++S++++CT LG + G ++HS ++ GL+ V+ L++MYAK +G M
Sbjct: 252 PDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAM--- 308
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY-DF 259
D A F++M + DV++W ++I+GY Q+G +
Sbjct: 309 ---------------------------DYANKVFERMPKNDVISWTALISGYVQSGVQEN 341
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+ + +F ML +S +KP+ T +S L +CA++ G+Q+HA++I++ + VGNAL
Sbjct: 342 KVMALFGEMLNES-IKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNAL 400
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+S YA+ G +E ARR+F+ L +R ++
Sbjct: 401 VSMYAESGCME---------------------------------EARRVFNQLYERSMIP 427
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
+D L +VR ++ T ++++S ++S+ L G+Q+HA +L
Sbjct: 428 CITE---------GRD-FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSL 477
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
++G S VSN+L++MYS+ G + A R FN + R +SWTSMI LA+HG E A+
Sbjct: 478 KAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRN-VISWTSMISGLAKHGYAERAL 536
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF M+ G+KP+ +TY+ VL+AC+H GLV +G+ Y+ M+ H + P H+A MVDL
Sbjct: 537 SLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDL 596
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
L R+G+++EA FI MPL+ D + W +LL ACR H N+++G+I A+ ++ +EP + Y
Sbjct: 597 LARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPY 656
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L NLY+ G W++ A IR +M+ + K G SW++++N H F D HP+ IY
Sbjct: 657 VLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIY 716
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
K+ + +IK MG+VPDT+ VLHD+ +++KEQ L HSEK+A+AFGLI+T +RI
Sbjct: 717 GKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIF 776
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCHSAIK++ K REI++RD+ RFH K G CSC +YW
Sbjct: 777 KNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/548 (26%), Positives = 255/548 (46%), Gaps = 112/548 (20%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPN-RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
N++L+ Y++ G + A VF+ M RD VSWT + G + ++ + EM++ +
Sbjct: 88 NSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGL 147
Query: 142 LPTQFTVTSVLASC-----TALGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGD 195
LP +T+ + +C L VH K GL G V V ++L++M A+ GD
Sbjct: 148 LPNAYTLCAAAHACFPHELYCLVGGVVLGLVH----KMGLWGTDVAVGSALIDMLARNGD 203
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
L AR FD +IE+ VV W +I+ Y Q
Sbjct: 204 -------------------------------LASARKVFDGLIEKTVVVWTLLISRYVQG 232
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EA+ +F + L+D +PD++T++S +SAC L ++LG Q+H+ +R + V
Sbjct: 233 ECAEEAVELFLDFLED-GFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACV 291
Query: 316 GNALISCYAK--VG-GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
L+ YAK +G ++ A K+ E+ + +VI++T L+ GY+
Sbjct: 292 SCGLVDMYAKSNIGQAMDYANKVFER--MPKNDVISWTALISGYV--------------- 334
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAV-ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
Q+G+ ++ V LF M+ E KPN+ T S++L +S++ D G
Sbjct: 335 ----------------QSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSG 378
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ-------------- 477
+Q+HA ++S +AS+ +V NAL++MY+++G + ARRVFN ++ R
Sbjct: 379 RQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLD 438
Query: 478 ----------ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+ ++ S+I A A G+ + QL L+ G D +++ +
Sbjct: 439 HRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRC 498
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL---EPDVVA 584
G +E R +N +K+ + I T SM+ L + G + A + +M L +P+ V
Sbjct: 499 GYLEDACRSFNELKDRNVISWT-----SMISGLAKHGYAERALSLFHDMILTGVKPNDVT 553
Query: 585 WGSLLSAC 592
+ ++LSAC
Sbjct: 554 YIAVLSAC 561
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 228/517 (44%), Gaps = 98/517 (18%)
Query: 159 GDLSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
GDL G+ +H +++ L V NSLL +Y++ G A+ VFDGMR
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGL-------- 113
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
RD+V+W +M + ++NG + +L + ML +S L P+
Sbjct: 114 ----------------------RDIVSWTAMASCLARNGAERGSLLLIGEML-ESGLLPN 150
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+TL + AC E + C + + K+
Sbjct: 151 AYTLCAAAHACFPHE---------------------------LYCLVGGVVLGLVHKM-- 181
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
G+ +V + L+D + GD+ AR++FD L ++ VV WT ++ Y Q ++AV
Sbjct: 182 --GLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
ELF + +G +P+ YT+S+M+S + L S+ G Q+H+ ALR G AS VS L+ MY
Sbjct: 240 ELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMY 299
Query: 458 SKAGNINAARRVFNLIHWR---QETVSWTSMIVALAQHGLGEEAIQ-LFERMLELGIKPD 513
+K+ NI A N + R + +SWT++I Q G+ E + LF ML IKP+
Sbjct: 300 AKS-NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPN 358
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYN 571
HITY +L +C + G++ + +V K +H ++V + +G ++EA
Sbjct: 359 HITYSSILKSCASISDHDSGRQVH---AHVIKSNQASAHTVGNALVSMYAESGCMEEARR 415
Query: 572 FI---------------ENMPLEPDVV---------AWGSLLSACRVHKNLDLG-KIAAE 606
+ PL+ +V + SL+SA L G ++ A
Sbjct: 416 VFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAM 475
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
L + ++L ++YS CG EDA +K
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELK 512
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/583 (24%), Positives = 254/583 (43%), Gaps = 161/583 (27%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
V + ++L++ A+ ++ A+KVFD + KT+ W ++S Y QG C
Sbjct: 188 VAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYV-QGE----CA------- 235
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+ A+ +F++ ++D P ++T++S++++CT LG + G ++
Sbjct: 236 -------------------EEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQL 276
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAK--VGDEM-MAKAVFDGMRLKNVSSWNVVVSLHIHS 224
HS ++ GL+ V+ L++MYAK +G M A VF+ M +V SW ++S ++ S
Sbjct: 277 HSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQS 336
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G V N ++A +F ML + S+KP+ T +S
Sbjct: 337 G-----------------VQENKVMA-------------LFGEMLNE-SIKPNHITYSSI 365
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ------ 338
L +CA++ G+Q+HA++I++ + VGNAL+S YA+ G +E A+++ Q
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 339 -----SGISY------------LNVIAFTTLLDGYIKIG---------------DIGPAR 366
G + ++ F +L+ +G G R
Sbjct: 426 IPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDR 485
Query: 367 RIFDSL--------------------RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+ +SL +DR+V++WT+M+ G ++G + A+ LF M+
Sbjct: 486 FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILT 545
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G KPN+ T A+LS S + + GK+ S R + LI
Sbjct: 546 GVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR---------DHGLIP----------- 585
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
R E + M+ LA+ G+ +EA++ E+ +K D + + +L AC
Sbjct: 586 ---------RME--HYACMVDLLARSGIVKEALEFIN---EMPLKADALVWKTLLGACRS 631
Query: 527 GGLVEQGQRYYNMMKNVHKIKP-TPSHFASMVDLLGRAGLLQE 568
+E G+ KNV +++P P+ + + +L AGL E
Sbjct: 632 HDNIEVGE---ITAKNVVELEPRDPAPYVLLSNLYADAGLWDE 671
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA +K G F+ NSL++ Y++ + A + F+E+ + + SW +++S AK
Sbjct: 469 GQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAK 528
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
G + A +F+ M PN V++ ++ + +G + F M +D L
Sbjct: 529 HGYAERALSLFHDMILTGVKPN--DVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL 583
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 270/780 (34%), Positives = 441/780 (56%), Gaps = 69/780 (8%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S ISP ++ + L KSR+ G +H IIK +F++NSL++FYA+
Sbjct: 127 SGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAEC----- 181
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
G LD A +VF+ M R+ VSWT++I Y
Sbjct: 182 --------------------------GELDCARKVFDEMSERNVVSWTSMICGYARREFA 215
Query: 127 KNAIRMFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
K+A+ +F MV+D+ V+P T+ V+++C L DL G+KV+ F+ +G+
Sbjct: 216 KDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGI--------- 266
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
+V D M++ +V +++ +D+A+ FD+ ++
Sbjct: 267 ------EVNDLMIS----------------ALVDMYMKCNAIDIAKRLFDEYGASNLDLC 304
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N+M + Y + G EALG+ N++ DS ++PD+ ++ S +S+C+ L + GK H Y++
Sbjct: 305 NAMASNYVRQGLTKEALGVL-NLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVL 363
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R F++ + NALI Y K + A +I ++ +S V+ + +++ GYI+ G++ A
Sbjct: 364 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDR--MSNKTVVTWNSIVAGYIENGEVDAA 421
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSS 424
F+++ ++++V+W ++ Q + ++A+E+F M +E + T+ ++ S
Sbjct: 422 WETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGH 481
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +LD K I+ ++ + + L+ M+S+ G+ +A +FN + R + +WT+
Sbjct: 482 LGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTA 540
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
I A+A G E AI+LF M+E G+KPD + ++G LTAC HGGLV+QG+ +N M+ +H
Sbjct: 541 AIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLH 600
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+ MVDLLGRAGLL+EA I++MP EP+ V W SLL+ACRV N+++ A
Sbjct: 601 GVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFA 660
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AEK+ ++ P+ +G+Y L N+Y+S G+W D A +R SMK G++K G S +QI+ K H
Sbjct: 661 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHE 720
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F D HP+ I + ++ ++G VPD ++VL DV+E K ML HSEKLA+A
Sbjct: 721 FTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMA 780
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
FGLIS+ + TT+RI+KNLRVC+ CHS KF K+ +REI++RD RFH ++G CSC D+
Sbjct: 781 FGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 62/360 (17%)
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+NS+I GY+ +G EA+ +F M+ +S + PDK+T LS CA G QIH I
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMM-NSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLI 159
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
I+ ++ V N+L+ YA+ G ++ A+K+ ++ +S NV+++T+++ GY
Sbjct: 160 IKMDYAKDLFVQNSLVHFYAECGELDCARKVFDE--MSERNVVSWTSMICGY-------- 209
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSS 423
ARR F KDAV+LF MVR E PN+ T+ ++S +
Sbjct: 210 ARREF-----------------------AKDAVDLFFRMVRDEDVIPNSVTMVCVISACA 246
Query: 424 SLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
L L+ G++++ SG E + L +S AL+ MY K I+ A+R+F+ +
Sbjct: 247 KLEDLETGEKVYDFIRDSGIEVNDLMIS-ALVDMYMKCNAIDIAKRLFDEYGASNLDLC- 304
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVE 531
+M + GL +EA+ + M++ GI+PD I+ + +++C+ HG ++
Sbjct: 305 NAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 364
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G ++ + N +++D+ + A+ + M VV W S+++
Sbjct: 365 NGFESWDNICN------------ALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAG 411
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 42/301 (13%)
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
+ +++ GY +GL K+A+ LF M+ G P+ YT LSV + +G QIH +
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+ A L V N+L+ Y++ G ++ AR+VF+ + R VSWTSMI A+ ++A+
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERN-VVSWTSMICGYARREFAKDAV 219
Query: 500 QLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN---------------- 542
LF RM+ + + P+ +T V V++AC +E G++ Y+ +++
Sbjct: 220 DLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDM 279
Query: 543 ---VHKIKPTPSHF----ASMVDLLG-------RAGLLQEA---YNFIENMPLEPDVVAW 585
+ I F AS +DL R GL +EA N + + + PD ++
Sbjct: 280 YMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISM 339
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN----LYSSCGKWEDAANIRKS 641
S +S+C +N+ GK +L + ++ +CN +Y C + + A I
Sbjct: 340 LSAISSCSQLRNILWGKSCHGYVL---RNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 396
Query: 642 M 642
M
Sbjct: 397 M 397
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/620 (40%), Positives = 380/620 (61%), Gaps = 4/620 (0%)
Query: 167 VHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
+H+ ++T L S V N L++MYA +G A+ FD + K+ W V+ + G
Sbjct: 126 LHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWG 185
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
LD AR Q ER+VV+W S+IAGYS+ G +A+ F ML D + PD+ + L
Sbjct: 186 LLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDG-VAPDEVAVIGAL 244
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SAC+ L+ L LG+ +H + + T + ALI YAK G + AQ + + G
Sbjct: 245 SACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQ-K 303
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
+ ++DGY K+G + AR +FD + RDV+ + +M+ GY +G +DA++LF M R
Sbjct: 304 PEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRR 363
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G + +N+T+ ++L+ +SL +L HG+ +HAS + + + AL+ MY K G ++
Sbjct: 364 HGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDE 423
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A VF+ + R + +WT+MI LA +G+G++A++ F +M G +P +TY+ VLTAC+
Sbjct: 424 ATAVFHRMGER-DVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACS 482
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
H L+++G+ ++N M+++HK+ P H+ M+DLL R+GLL EA + ++ MP++P+ V W
Sbjct: 483 HSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIW 542
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
GS+LSACRVHKN+DL + AAE LL + P+ Y L N+Y +W DA +R M+
Sbjct: 543 GSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEER 602
Query: 646 GVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDV 705
GVKKT G+S + + +VH F D HP I M +I +K +G+ P T+ + DV
Sbjct: 603 GVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDV 662
Query: 706 EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
+E+ KEQ L HSEK+AIAFGLIS P + + I+KNLRVC DCHSAIK + +L +REI+V
Sbjct: 663 DEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIV 722
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RD +RFHHF+ G CSC D+W
Sbjct: 723 RDRSRFHHFRDGACSCNDFW 742
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 241/470 (51%), Gaps = 38/470 (8%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
+ N L++ YA A++ FDE+P K W T++ + G LD A + P R
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
+ VSWT++I Y+ GR +A+ F M+ D V P + V L++C+ L +L G+ +H
Sbjct: 201 NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLH 260
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RLKNVSSWNVVVSLHIHSGRL 227
V + + N+ +L++MYAK GD A+AVFD + R + WN ++ + G +
Sbjct: 261 LLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHV 320
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
D+AR+ FDQM RDV+T+NSMI GY +G +AL +F M + ++ D FT+ S L+A
Sbjct: 321 DVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQM-RRHGMRADNFTVVSLLTA 379
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
CA+L L G+ +HA I Q+IVE+ +V
Sbjct: 380 CASLGALPHGRALHA---------------------------SIEQRIVEE------DVY 406
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
T LLD Y+K G + A +F + +RDV WTAM+ G NG+ KDA+E F M R+G
Sbjct: 407 LGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDG 466
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINA 465
+P + T A+L+ S + LD G+ +H + +RS V + +I + +++G ++
Sbjct: 467 FQPTSVTYIAVLTACSHSSLLDEGR-LHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDE 525
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
A + + + V W S++ A H + A E +L+L + D +
Sbjct: 526 AMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAV 575
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/722 (36%), Positives = 395/722 (54%), Gaps = 48/722 (6%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+D+V W + E + AI +F EM V +T VL +C G L G+ V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAV 178
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H++ +K L V L MYA+ D A V D M +V WN VV+ G +
Sbjct: 179 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 238
Query: 228 D----LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
D LA E +V TWN++++G S++G D EALG+ A+MLK L+PD T++S
Sbjct: 239 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK-QGLRPDATTVSS 297
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L + AN L+ G +IH + +R + + G AL+ YAK G ++ AQK+++ + +
Sbjct: 298 LLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLD--ALEH 355
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLNKDAVEL 399
N+ + +L+ GY G A + + ++ D D+ W ++ GY NG + AV L
Sbjct: 356 RNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLL 415
Query: 400 FR-----------------------------------SMVREGPKPNNYTLSAMLSVSSS 424
R M ++G +P+ T+S +L +
Sbjct: 416 LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAG 475
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
LA GK++H ALR + VS ALI MYSK G++ +A+ +F I ++ V +
Sbjct: 476 LALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQ-QKNLVLCNA 534
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
M+ LA HG G EAI+LF M G+KPD IT+ +LTAC GLV +G Y++ M+ +
Sbjct: 535 MLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKY 594
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+KPT ++A MVDLL R G L EA +FIE P++P WG+LL+ C +H NL L ++A
Sbjct: 595 GVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVA 654
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
A L ++EP NS Y + NLY +++A +++ +MK GV G+SW+QI+ +HV
Sbjct: 655 ARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHV 714
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V+ HP+ IY ++ ++ +IK+ G+VPDT+ + ++V+E+ KE++L H+EKLAI
Sbjct: 715 FEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAIT 774
Query: 725 FGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+GLI S +R+MKN R+CNDCH K I L DR+I++RDA RFHHF G CSC D
Sbjct: 775 YGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCND 834
Query: 784 YW 785
YW
Sbjct: 835 YW 836
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 236/541 (43%), Gaps = 110/541 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +K L + L YA+ ++ A +V D M ++ WN +++ A+
Sbjct: 175 GRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCAR 234
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G +D A E+ M P + +W T++ + GR + A+ + M++ + P T
Sbjct: 235 LGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATT 294
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
V+S+L S G L G ++H F ++ L V +L++MYAK G A+ V D +
Sbjct: 295 VSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALE 354
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALG 263
+N+++WN +V+ + ++GR D+A + M ++ D+ TWN +I GYS NG +A+
Sbjct: 355 HRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVL 414
Query: 264 M----------------------------------FANMLKDSSLKPDKFTLASTLSACA 289
+ F + ++ ++P T++ L ACA
Sbjct: 415 LLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACA 474
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L K GK++H + +R +D V ALI Y+K GG ++ K+
Sbjct: 475 GLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSK-GGSLVSAKV-------------- 519
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
IF+S++ +++V AML G +G ++A+ELF M G K
Sbjct: 520 ------------------IFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLK 561
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P++ T +A+L+ S+ + G + S M +K G
Sbjct: 562 PDSITFTALLTACRSMGLVTEGWEYFDS------------------METKYGV------- 596
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-HGG 528
+ T ++ M+ LA+ G +EA+ ER I P + +LT C+ HG
Sbjct: 597 ------KPTTENYACMVDLLARCGYLDEAMDFIERS---PIDPGASHWGALLTGCSIHGN 647
Query: 529 L 529
L
Sbjct: 648 L 648
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 60/274 (21%)
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASL-----DH------GKQIHASALRSGEASSLSVS 450
+ +R G P Y+ ++S+ A L DH Q+H+ A+R+G + V+
Sbjct: 33 AALRTGVPP--YSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVT 90
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQE-----TVSWTSMIVALAQHGLGEEAIQLFERM 505
AL+ + ++ G + R L+H E V W + LA+ +EAI +F M
Sbjct: 91 CALVDLLARLGRGPSCAR---LLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREM 147
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYY----NMMKNVHKIKPTPSHFASM----- 556
G+ D T VL AC G + +G+ + + + H + P A M
Sbjct: 148 QARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPL--VPGFLAGMYAENA 205
Query: 557 --------VDLLG---------------RAGLLQEAYNFIENMPL---EPDVVAWGSLLS 590
+D +G R GL+ +A M EP+V W ++LS
Sbjct: 206 DVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLS 265
Query: 591 ACRVH--KNLDLGKIAAEKLLLIEPDNSGAYSAL 622
C H LG +A+ + PD + S L
Sbjct: 266 GCSRHGRDREALGVVASMLKQGLRPDATTVSSLL 299
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 276/813 (33%), Positives = 427/813 (52%), Gaps = 136/813 (16%)
Query: 10 ISPLEF----YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
+SP EF YA+ LQ ++ P GK +H I+K G L +F
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLF---------------- 74
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+WN +L+ Y K L A ++F+ MP R+++S+ T+I Y E R
Sbjct: 75 ---------------AWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119
Query: 126 FKNAIRMFVEMVQD--QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F AI +FV + ++ ++ P FT L T G+L G +H+ + K G V
Sbjct: 120 FLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWG--IHACIFKLGHESNAFVG 177
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+L++ Y+ G R+D+AR FD ++ +D+V
Sbjct: 178 TALIDAYSVCG-------------------------------RVDVAREVFDGILYKDMV 206
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W M+ +++N EAL +F+ M + KP+ FT AS AC LE +GK +H
Sbjct: 207 SWTGMVTCFAENDCFKEALKLFSQM-RMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGC 265
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+++ ++ VG AL LD Y K GDI
Sbjct: 266 ALKSRYELDLYVGVAL---------------------------------LDLYTKSGDID 292
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
ARR F+ + +DV+ W+ M+ Y Q+ +K+AVE+F M + PN +T +++L +
Sbjct: 293 DARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACA 352
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
++ L+ G QIH ++ G S + VSNAL+ +Y+K G + + +F R + V+W
Sbjct: 353 TMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRND-VTWN 411
Query: 484 SMIVALAQHGLGEEAIQLFERMLE-------------------------------LGIKP 512
++IV Q G GE+A++LF MLE L +KP
Sbjct: 412 TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKP 471
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D +T+VGVL+AC + GL++QGQ Y+ M H I+P H+ MV LLGR G L +A
Sbjct: 472 DKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL 531
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I+ +P +P V+ W +LL AC +H +++LG+I+A+++L +EP + + L N+Y++ +W
Sbjct: 532 IDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRW 591
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
++ A++RK+MK GVKK G SW++ Q VH F V D HP+ I + + + K+
Sbjct: 592 DNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKA 651
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G++P+ VL DVE++ KE++L HSE+LA++FG+I TP + +RIMKNLR+C DCH+AI
Sbjct: 652 GYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAI 711
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+V REIVVRD RFHHF++GLCSC DYW
Sbjct: 712 KCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/656 (36%), Positives = 386/656 (58%), Gaps = 34/656 (5%)
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+R V+++ P T +++ C+ L GKKVH + +G + + N LL M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YAK G + A+ VFD M +++ SWNV+V+ + G L+ AR FD+M E+D +W +M+
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GY + EAL +++ M + + +P+ FT++ ++A A ++ ++ GK+IH +I+R
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
D+ + + +++L+D Y K G I AR IF
Sbjct: 250 DS---------------------------------DEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
D + ++DVV+WT+M+ Y ++ ++ LF +V +PN YT + +L+ + L + +
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE 336
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
GKQ+H R G S++L+ MY+K GNI +A+ V + + + VSWTS+I
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQ+G +EA++ F+ +L+ G KPDH+T+V VL+ACTH GLVE+G ++ + H++ T
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H+ +VDLL R+G ++ + I MP++P W S+L C + N+DL + AA++L
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
IEP+N Y + N+Y++ GKWE+ +RK M+ +GV K G SW +I+ K HVF D
Sbjct: 516 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAAD 575
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP + I + ++ ++KE G+VP T+ VLHDVE++ KE+ L +HSEKLA+AF ++S
Sbjct: 576 TSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILS 635
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T E T +++ KNLR C DCH AIKFI + R+I VRD+TRFH F+ G CSC DYW
Sbjct: 636 TEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 251/539 (46%), Gaps = 78/539 (14%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
P Y +L+Q ++R GK VH I G + + N L+ YAK S+ A+KVF
Sbjct: 84 PASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVF 143
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
DEMP + LCSWN +++ YA+ G L+ A ++F+ M +DS SWT ++ Y + + + A+
Sbjct: 144 DEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALV 203
Query: 132 MFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++ M + P FTV+ +A+ A+ + GK++H +V+ GL + +SL++MY
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
K G A+ +FD + K+V SW ++ + S R W
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR------------------WR---- 301
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
E +F+ ++ S +P+++T A L+ACA+L +LGKQ+H Y+ R FD
Sbjct: 302 ---------EGFSLFSELV-GSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
++L+ Y K G +E A+ +V+ G +++++T+L+ G
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVD--GCPKPDLVSWTSLIGGCA------------- 396
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
QNG +A++ F +++ G KP++ T +LS + ++
Sbjct: 397 ------------------QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 431 GKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G + S S S L+ + +++G + V + + + W S++
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Query: 490 AQHG---LGEEAIQ-LFERMLELGIKPDH-ITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+ +G L EEA Q LF+ I+P++ +TYV + G E+ + M+ +
Sbjct: 499 STYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 43/260 (16%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E PN + L A L L GK VH + + G F +SL++ Y K
Sbjct: 315 ERPNEYTFAGVLNACADLTTEEL-------GKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+I AK V D P L SW +++ A+ G+ D A + F+L
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL----------------- 410
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK-VHSFVVKTGLSGCV 180
+++ P T +VL++CT G + G + +S K LS
Sbjct: 411 --------------LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTS 456
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS-WNVVVSLHIHSGRLDLARAQFDQMIE 239
+ L+++ A+ G K+V M +K W V+ G +DLA ++ +
Sbjct: 457 DHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK 516
Query: 240 ---RDVVTWNSMIAGYSQNG 256
+ VT+ +M Y+ G
Sbjct: 517 IEPENPVTYVTMANIYAAAG 536
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/739 (35%), Positives = 415/739 (56%), Gaps = 90/739 (12%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
NS++ Y A+K+FDEMP + + SWN ++S Y K G +D A +VF+LMP R+ V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SWT ++ Y G+ A +F +M + + + T +L G + K++ +
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 172 VKTGLSGCVNVT-NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
N+ S+++ K G A+ +FD M ++V +W +V+ + + R+D A
Sbjct: 168 PDKD-----NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDA 222
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD M E+ V+W SM+ GY QNG +A +F M +KP + AC
Sbjct: 223 RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKP--------VIAC-- 268
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
NA+IS + G + A++
Sbjct: 269 --------------------------NAMISGLGQKGEIAKARR---------------- 286
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
+FDS+++R+ +W ++ +E+NG +A++LF M ++G +P
Sbjct: 287 -----------------VFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
TL ++LSV +SLASL HGKQ+HA +R + V++ L+TMY K G + ++ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGL 529
+ ++ + W S+I A HGLGEEA+++F M L KP+ +T+V L+AC++ G+
Sbjct: 390 DRFP-SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
VE+G + Y M++V +KP +H+A MVD+LGRAG EA I++M +EPD WGSLL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
ACR H LD+ + A+KL+ IEP+NSG Y L N+Y+S G+W D A +RK MK V+K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 650 TQGFSWVQIQNKVHVF---GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+ G SW +++NKVH F G+ HP++++I + ++ ++E G+ PD + LHDV+
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINS--HPEQESILKILDELDGLLREAGYNPDCSYALHDVD 626
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E+ K L++HSE+LA+A+ L+ E +R+MKNLRVC+DCH+AIK I K+ +REI++R
Sbjct: 627 EEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILR 686
Query: 767 DATRFHHFKKGLCSCRDYW 785
DA RFHHF+ G CSC+DYW
Sbjct: 687 DANRFHHFRNGECSCKDYW 705
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 62/286 (21%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV +++ Y + + A+K+FD MP KT SW ++L Y + GR++ A E+F +MP
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP 261
Query: 107 -------------------------------NRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
R+ SW T+I + G A+ +F+
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V PT T+ S+L+ C +L L GK+VH+ +V+ V V + L+ MY K G+
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +K +FD K++ + WNS+I+GY+ +
Sbjct: 382 LVKSKLIFDRFPSKDI-------------------------------IMWNSIISGYASH 410
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
G EAL +F M S KP++ T +TLSAC+ ++ G +I+
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 39/238 (16%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P P+LIS L A L + GK VHA++++C + V++ + LM Y K
Sbjct: 329 PTFPTLISILSVCASLASLHH-------GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ +K +FD P K + WN+I+S YA G + A +VF MP S
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK----------- 430
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNV 182
P + T + L++C+ G + G K++ + G+
Sbjct: 431 -------------------PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH 471
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+++M + G A + D M ++ + + W ++ +LD+A ++IE
Sbjct: 472 YACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE 529
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/800 (32%), Positives = 426/800 (53%), Gaps = 80/800 (10%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
++G VHA ++K G + V L +L+N Y K I A +VFDE
Sbjct: 148 WLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDET--------------- 192
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
P ++ W TI++ R+++A+ + M T T+
Sbjct: 193 ----------------PLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIV 236
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L +C L L+ GK++H +V++ G ++ NS+++MY++ +A+AVFD
Sbjct: 237 KLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDH 296
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMF 265
N++SWN ++S + +G L+ A F +M I+ D++TWNS+++G+ G +E +
Sbjct: 297 NLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQG-SYENVLTN 355
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
L+ + KPD ++ S L A L LGK+IH YI+R++ + V +L+ Y K
Sbjct: 356 IRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIK 415
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR---------- 375
+E A+ + + N+ A+ +L+ GY G A ++ +++
Sbjct: 416 NDCLEKAEVVFHHTKNK--NICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWN 473
Query: 376 -----------------------------DVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+VV+WTAM+ G QN DA++ F M E
Sbjct: 474 SLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEE 533
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
KPN+ T+S +L + + L G++IH +++ G + ++ ALI MYSK G + A
Sbjct: 534 NVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVA 593
Query: 467 RRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
VF I +++T+ W M++ A +G GEE LF+ M + GI+PD IT+ +L+ C
Sbjct: 594 HEVFRNI--KEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCK 651
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
+ GLV G +Y++ MK + I PT H++ MVDLLG+AG L EA +FI MP + D W
Sbjct: 652 NSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIW 711
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
G++L+ACR+HK++ + +IAA L +EP NS Y + N+YS+ +W D +++SM +
Sbjct: 712 GAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAM 771
Query: 646 GVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDV 705
GVK +SW+Q++ +HVF E HP+ IY + ++ EIK++G+VPDT V ++
Sbjct: 772 GVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNI 831
Query: 706 EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
++ KE++L H+EKLA+ +GL+ T +R++KN R+C DCH+A K+I +REI +
Sbjct: 832 DDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFL 891
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RD RFHHF G CSC D W
Sbjct: 892 RDGGRFHHFMNGECSCNDRW 911
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 238/517 (46%), Gaps = 76/517 (14%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LLQ+ K R GK +H +I+ G + + NS+++ Y++ + A+ VFD
Sbjct: 238 LLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHN 297
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFV 134
L SWN+I+S+YA G L+ A ++F M + D ++W +++ + G ++N +
Sbjct: 298 LASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIR 357
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+ P ++TS L + LG + GK++H +++++ L V V SL++MY K
Sbjct: 358 SLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKND 417
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
A+ VF + KN+ +WN ++S + + G D A QM I+ D+VTWNS+++
Sbjct: 418 CLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVS 477
Query: 251 GYSQNGYDFEALGM----------------------------------FANMLKDSSLKP 276
GYS +G EAL + F + +++ ++KP
Sbjct: 478 GYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKP 537
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ T+++ L ACA LK G++IH + ++ F + ALI Y+K G +++A +
Sbjct: 538 NSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHE-- 595
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+F +++++ + W M++GY G ++
Sbjct: 596 -------------------------------VFRNIKEKTLPCWNCMMMGYAIYGHGEEV 624
Query: 397 VELFRSMVREGPKPNNYTLSAMLS-VSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
LF +M + G +P+ T +A+LS +S +D K + ++ + ++
Sbjct: 625 FTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVD 684
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ KAG ++ A + + + + W +++ A H
Sbjct: 685 LLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLH 721
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 134/570 (23%), Positives = 254/570 (44%), Gaps = 47/570 (8%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI-RMFVEMVQDQVL 142
+++ Y + G + A +VF + R+ + W + + + G + I +F E+ V
Sbjct: 69 SMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVK 128
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+T VL C AL +L G +VH+ ++K G V+++ +L+N+Y K A V
Sbjct: 129 FDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQV 188
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD L+ WN +V ++ S R W +
Sbjct: 189 FDETPLQEDFLWNTIVMANLRSER------------------WEDALE------------ 218
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ ++ +S K T+ L AC L L GKQIH Y+IR + + N+++S
Sbjct: 219 --LSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSM 276
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVV 378
Y++ +E+A+ + + + N+ ++ +++ Y G + A +F + D++
Sbjct: 277 YSRNNRLELARAVFDSTEDH--NLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDII 334
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W ++L G+ G ++ + RS+ G KP++ ++++ L L + GK+IH
Sbjct: 335 TWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYI 394
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEE 497
+RS + V +L+ MY K + A VF+ H + + + +W S+I GL +
Sbjct: 395 MRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFH--HTKNKNICAWNSLISGYTYKGLFDN 452
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A +L +M E GIK D +T+ +++ + G E+ N +K++ + P + +M+
Sbjct: 453 AEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSL-GLTPNVVSWTAMI 511
Query: 558 DLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEP 613
+ +A F M E P+ +LL AC L G +I +
Sbjct: 512 SGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFV 571
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
D+ +AL ++YS GK + A + +++K
Sbjct: 572 DDIYIATALIDMYSKGGKLKVAHEVFRNIK 601
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 208/489 (42%), Gaps = 65/489 (13%)
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEALGMFANMLKDSSLKPDKF 279
++ G + A F R+ + WNS + ++ G D E L +F L D +K D
Sbjct: 74 YLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKE-LHDKGVKFDSK 132
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
L L C L +L LG ++HA +++ F + ALI+ Y K G++
Sbjct: 133 ALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGID--------- 183
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
A ++FD ++ W +++ ++ +DA+EL
Sbjct: 184 ------------------------RANQVFDETPLQEDFLWNTIVMANLRSERWEDALEL 219
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
R M K + T+ +L L +L+ GKQIH +R G S+ S+ N++++MYS+
Sbjct: 220 SRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSR 279
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+ AR VF+ SW S+I + A +G A LF M IKPD IT+
Sbjct: 280 NNRLELARAVFDSTE-DHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNS 338
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKI-----KPTPSHFASMVDL---LGRAGLLQEAYN 571
+L+ G + QG Y N++ N+ + KP S + LG L +E +
Sbjct: 339 LLS-----GHLLQGS-YENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHG 392
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+I LE DV SL+ + L+ ++ + N A+++L + Y+ G
Sbjct: 393 YIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHH---TKNKNICAWNSLISGYTYKGL 449
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
+++A + MK G+ K +W + + + G + + A+ N+ IK
Sbjct: 450 FDNAEKLLIQMKEEGI-KADLVTWNSLVSGYSMSGCSE----EALAVINR-------IKS 497
Query: 692 MGFVPDTAS 700
+G P+ S
Sbjct: 498 LGLTPNVVS 506
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/705 (36%), Positives = 400/705 (56%), Gaps = 39/705 (5%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+L A G A ++F+ +P D + +T+I + G AIR++ + + P
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+V +C A GD S K+VH ++ G+ + N+L++ Y K A+ VFD
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ +K+V SW + S +++ G L A F +M WN
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM------GWN------------------ 227
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
+KP+ TL+S L AC+ L+ LK G+ IH + +R V +AL+S YA
Sbjct: 228 --------GVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYA 279
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA----W 380
+ V+ A+ + + + + +V+++ +L Y + +F + + V A W
Sbjct: 280 RCLSVKQARLVFDL--MPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATW 337
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
A++ G +NG + AVE+ R M G KPN T+S+ L S L SL GK++H R
Sbjct: 338 NAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFR 397
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
L+ AL+ MY+K G++N +R VF++I R++ V+W +MI+A A HG G E +
Sbjct: 398 HWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMI-CRKDVVAWNTMIIANAMHGNGREVLL 456
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LFE ML+ GIKP+ +T+ GVL+ C+H LVE+G + +N M H ++P +H+A MVD+
Sbjct: 457 LFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVF 516
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
RAG L EAY FI+ MP+EP AWG+LL ACRV+KN++L KI+A KL IEP+N G Y
Sbjct: 517 SRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYV 576
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
+L N+ + W +A+ R MK G+ KT G SW+Q+ ++VH F V D + + D IYN
Sbjct: 577 SLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYN 636
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ ++ +++K G+ PDT VL D++++ K + L HSEKLA+AFG+++ +++R+ K
Sbjct: 637 FLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFK 696
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLR+C DCH+AIK++ K+V I+VRD+ RFHHF+ G CSC+D W
Sbjct: 697 NLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 220/461 (47%), Gaps = 70/461 (15%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VH I+CG+ FL N+L++ Y K + + A++VFD++ V
Sbjct: 152 KEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVV---------------- 195
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
+D VSWT++ Y G + + +F EM + V P T++S+L
Sbjct: 196 ---------------KDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSIL 240
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C+ L DL +G+ +H F V+ G+ V V ++L+++YA+ A+ VFD M ++V
Sbjct: 241 PACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVV 300
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
SWN V++ + + D A F QM +E D TWN++I G +NG +A+ M M
Sbjct: 301 SWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM 360
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ KP++ T++S L AC+ LE L++GK++H Y+ R AL+ YAK
Sbjct: 361 -QNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKC-- 417
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
GD+ +R +FD + +DVVAW M++
Sbjct: 418 -------------------------------GDLNLSRNVFDMICRKDVVAWNTMIIANA 446
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+G ++ + LF SM++ G KPN+ T + +LS S ++ G QI S R +
Sbjct: 447 MHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDA 506
Query: 449 VSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
A ++ ++S+AG ++ A + +W +++ A
Sbjct: 507 NHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGA 547
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 168/338 (49%), Gaps = 18/338 (5%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L + L +LKS G+ +H ++ G+ +VF+ ++L++ YA+ S
Sbjct: 231 PNSVTLSSILPACSEL--KDLKS-----GRAIHGFAVRHGMIENVFVCSALVSLYARCLS 283
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ A+ VFD MP + + SWN +L+AY D +F+ M ++ D +W +I
Sbjct: 284 VKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGG 343
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
E G+ + A+ M +M P Q T++S L +C+ L L GK+VH +V + L G
Sbjct: 344 CMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGD 403
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+ +L+ MYAK GD +++ VFD + K+V +WN ++ + G F+ M++
Sbjct: 404 LTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQ 463
Query: 240 RDV----VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+ VT+ +++G S + E L +F +M +D ++PD A + + +L
Sbjct: 464 SGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRL- 522
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+ + +I R + T AL+ VE+A+
Sbjct: 523 --HEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAK 558
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/708 (36%), Positives = 395/708 (55%), Gaps = 67/708 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C NT+L+ Y++ GR + A VF M RD +SW +++ Y + G+ + +++ E++Q
Sbjct: 1083 VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQ 1142
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ T S LA+C+ L K VH+ ++ G + V N+L+ MY K+G M
Sbjct: 1143 MGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMME 1202
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
AK V M + D VTWN++I G+++N
Sbjct: 1203 AKKVLQ-------------------------------TMPQPDRVTWNALIGGHAENEEP 1231
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL-KLGKQIHAYIIRTEFDATGPVGN 317
EA+ + ++++ + + T+ S L AC+ + L K G IHA+I+ T F++ V N
Sbjct: 1232 NEAVKAY-KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN 1290
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YAK G D+ + IFD L ++
Sbjct: 1291 SLITMYAKCG---------------------------------DLNSSNYIFDGLGNKSP 1317
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+ W AM+ +G ++A+++F M G + ++ S L+ +++LA L+ G+Q+H
Sbjct: 1318 ITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGL 1377
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
++ G S L V+NA + MY K G ++ ++ R +SW +I A A+HG ++
Sbjct: 1378 VIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR-LSWNILISAFARHGCFQK 1436
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A + F ML+LG KPDH+T+V +L+AC HGGLV++G YY+ M + P H ++
Sbjct: 1437 ARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCII 1496
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGR+G L A FI+ MP+ P+ +AW SLL+ACR+H NL+L + AE LL ++P +
Sbjct: 1497 DLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDS 1556
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY N+ ++ GKWED N+RK M +KK SWV++++KVH FG+ + HPQ
Sbjct: 1557 AYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASR 1616
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
I K+ ++ KE G+VPDT+ LHD++E+ KE L +HSE+LA+AFGLI+TPE++TLR
Sbjct: 1617 ISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLR 1676
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLRVC DCHS KF+ +V R+IV+RD RFHHF G CSC DYW
Sbjct: 1677 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 320/656 (48%), Gaps = 99/656 (15%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
P+ + P Y +LQ + + G L+H +I G + L L+ FY K +
Sbjct: 25 PTRLDP-SLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIA 83
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
A+ VFD MP R VSWT ++ Y++ GRF
Sbjct: 84 ARNVFDG-------------------------------MPERSVVSWTAMVSGYSQNGRF 112
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+ A +F +M V QFT S L +CT+L L G +V GC+ +
Sbjct: 113 EKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ---------GCIQKGRFV 163
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
N++ K + +V H G+++ A F M+ERDVV+WN
Sbjct: 164 ENLFVK----------------------SALVDFHSKCGKMEDASYLFGTMMERDVVSWN 201
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MI GY+ G+ ++ MF +ML+ L PD +TL S L A A L + QIH
Sbjct: 202 AMIGGYAVQGFADDSFCMFRSMLR-GGLVPDCYTLGSVLRASAEGGGLIIANQIHG---- 256
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
I+ Q G +++ L++ Y K G + A+
Sbjct: 257 ----------------------------IITQLGYGSYDIVT-GLLINAYAKNGSLRSAK 287
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGL-NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
+ + +D+ + TA++ GY G+ + DA++LF+ M + ++ L +ML++ ++L
Sbjct: 288 DLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANL 347
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
AS G QIHA AL+ + +++ NALI MY+K+G I A+R F+ + + +SWTS+
Sbjct: 348 ASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSL 406
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I A+HG G A+ L+++M G KP+ +T++ +L AC+H GL +G +N M N +
Sbjct: 407 ISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYN 466
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
IKP H++ MVDL R GLL+EAYN + + ++ + WG++L A ++ + LGK AA
Sbjct: 467 IKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAA 526
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
L ++P+NS Y L ++YS+ G W+DA IRK M+ KK G+S+ Q K
Sbjct: 527 SNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 582
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/563 (26%), Positives = 267/563 (47%), Gaps = 104/563 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I ++L +F N+L+N Y+K +I +A+ VFDEM + SW+T+LS Y +
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+G ++ A+ +F +M V P F V S+
Sbjct: 823 -------------------------------VGLYEEAVGLFCQMWGLGVEPNGFMVASL 851
Query: 152 LASCTALGDLS-AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ +C+ G ++ G +VH FVVKTG+ G V V +L++ Y +G A+ +F+
Sbjct: 852 ITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFE------ 905
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+M + +VV+W S++ GYS +G E L ++ M +
Sbjct: 906 -------------------------EMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM-R 939
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ ++ T A+ S+C LE LG Q+ +II+ F+ + V N+LIS ++ VE
Sbjct: 940 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A +FD + + D+++W AM+ Y +
Sbjct: 1000 ---------------------------------EACYVFDHMNECDIISWNAMISAYAHH 1026
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
GL ++++ F M + N+ TLS++LSV SS+ +L G+ IH ++ G S++ +
Sbjct: 1027 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 1086
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
N L+T+YS+AG A VF + R + +SW SM+ Q G + +++ +L++G
Sbjct: 1087 NTLLTLYSEAGRSEDAELVFQAMTER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGK 1145
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMM--KNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+H+T+ L AC++ + + + + ++ H + ++V + G+ G++ E
Sbjct: 1146 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGN---ALVTMYGKLGMMME 1202
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A ++ MP +PD V W +L+
Sbjct: 1203 AKKVLQTMP-QPDRVTWNALIGG 1224
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 261/545 (47%), Gaps = 102/545 (18%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S ++ ++ AC VF+ M D +SW +I Y G + ++R F M
Sbjct: 986 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE 1045
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T++S+L+ C+++ +L G+ +H VVK GL V + N+LL +Y++
Sbjct: 1046 TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSE---------- 1095
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+GR + A F M ERD+++WNSM+A Y Q+G + L
Sbjct: 1096 ---------------------AGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGL 1134
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ A +L+ + + T AS L+AC+N E L K +HA II F VGNAL++
Sbjct: 1135 KILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTM 1193
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K+G + A+K+++ ++ D V W A
Sbjct: 1194 YGKLGMMMEAKKVLQ---------------------------------TMPQPDRVTWNA 1220
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNY-TLSAMLSVSSSLAS-LDHGKQIHASALR 440
++ G+ +N +AV+ ++ ++RE P NY T+ ++L S+ L HG IHA +
Sbjct: 1221 LIGGHAENEEPNEAVKAYK-LIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 1279
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+G S V N+LITMY+K G++N++ +F+ + + ++W +M+ A A HG GEEA++
Sbjct: 1280 TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG-NKSPITWNAMVAANAHHGCGEEALK 1338
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM--------------------- 539
+F M +G+ D ++ G L A + ++E+GQ+ + +
Sbjct: 1339 IFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYG 1398
Query: 540 ----MKNVHKIKPTPSHFAS-----MVDLLGRAGLLQEAY-NFIENMPL--EPDVVAWGS 587
M +V K+ P P + + ++ R G Q+A F E + L +PD V + S
Sbjct: 1399 KCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVS 1458
Query: 588 LLSAC 592
LLSAC
Sbjct: 1459 LLSAC 1463
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 220/522 (42%), Gaps = 102/522 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K+VHA II G H + + N+L+ Y K + AKKV MP +WN ++ +A+
Sbjct: 1169 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAE- 1227
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF-TVTSV 151
N PN A++ + ++++++ +P + T+ SV
Sbjct: 1228 ----------NEEPNE--------------------AVKAY-KLIREKGIPANYITMVSV 1256
Query: 152 LASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L +C+A D L G +H+ +V TG V NSL+ MYAK GD + +FDG+ K+
Sbjct: 1257 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 1316
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+WN +M+A + +G EAL +F M +
Sbjct: 1317 PITWN-------------------------------AMVAANAHHGCGEEALKIFGEM-R 1344
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ + D+F+ + L+A ANL L+ G+Q+H +I+ F++ V NA + Y K G +
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 1404
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
K++ Q +R ++W ++ + ++
Sbjct: 1405 DVLKMLPQP---------------------------------INRSRLSWNILISAFARH 1431
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
G + A E F M++ GPKP++ T ++LS + +D G + S R G +
Sbjct: 1432 GCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEH 1491
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+I + ++G ++ A + ++W S++ A HG E A + E +LEL
Sbjct: 1492 CVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELD 1551
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
D YV C G E + M + + IK P+
Sbjct: 1552 -PSDDSAYVLYSNVCATSGKWEDVENLRKEMGS-NNIKKQPA 1591
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 216/437 (49%), Gaps = 45/437 (10%)
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS----SWNVVVSLHIHSGRLDLARAQF 234
C+N N L ++++ +M KA+ + +V+ N +++++ G ++ AR F
Sbjct: 743 CLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 802
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D+M R+ +W++M++GY + G EA+G+F M ++P+ F +AS ++AC+ +
Sbjct: 803 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW-GLGVEPNGFMVASLITACSRSGYM 861
Query: 295 -KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
G Q+H ++++T VG AL+ Y +G V AQ
Sbjct: 862 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ-------------------- 901
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
++F+ + D +VV+WT+++VGY +G + + +++ M +EG N
Sbjct: 902 -------------KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQN 948
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T + + S L G Q+ ++ G S+SV+N+LI+M+S ++ A VF+ +
Sbjct: 949 TFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHM 1008
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ + +SW +MI A A HGL E+++ F M L + + T +L+ C+ ++ G
Sbjct: 1009 N-ECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWG 1067
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+ + ++ + + +++ L AG ++A + M E D+++W S++ AC
Sbjct: 1068 RGIHGLVVKL-GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMM-ACY 1124
Query: 594 VH--KNLDLGKIAAEKL 608
V K LD KI AE L
Sbjct: 1125 VQDGKCLDGLKILAELL 1141
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 155/641 (24%), Positives = 273/641 (42%), Gaps = 67/641 (10%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G +HA +K V + N+L++ YAK+ I AK+ FDEM K + SW +++S YA
Sbjct: 352 LGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYA 411
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
K G +A ++ M ++ + V++ +++ + G F MV + +
Sbjct: 412 KHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRA 471
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM-----YAKVGDEMMAKA 201
S + A L ++ ++ + K + ++ ++L Y +G E A
Sbjct: 472 EHYSCMVDLFARQGLL--EEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEA-ASN 528
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS-------- 253
+F+ M+ +N ++ V+ S++ +G D A M ER AGYS
Sbjct: 529 LFN-MQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERST----KKNAGYSFFQATKKS 583
Query: 254 ------QNGY---DFEALGMFANMLKDSSLK----PDKFTLASTLSACANLEKLKLGKQI 300
Q+G DF L A L + + + PD F L + + + K + +
Sbjct: 584 IPLLQVQHGVSRRDFNILDFGAIFLSNRTPQEECFPDTFVLEPSFLPPSAVWKSSDHRSV 643
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
T + VG+AL + VE + + +G ++ T I
Sbjct: 644 QLNGNLTV--SVDEVGSAL-----GMRQVEKPKTVGSHTGQKQWAPVSTITTASALI--- 693
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNG-LNKDAVELF--RSMVREGPK---PNNYT 414
+ P + ++D D+ A G + G L+ D ++F + G + N+
Sbjct: 694 NETPVENFAEQVKDDDLKTSNA---GSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAVNFP 750
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
L ++S +A GK +HA + + +N LI MYSK GNI AR VF+ +
Sbjct: 751 LKGFSEITSQMA----GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR 806
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG-LVEQG 533
R E SW++M+ + GL EEA+ LF +M LG++P+ ++TAC+ G + ++G
Sbjct: 807 HRNEA-SWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEG 865
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+ + + + A +V G GL+ A E MP + +VV+W SL+
Sbjct: 866 FQVHGFVVKTGILGDVYVGTA-LVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYS 923
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
N G++ + + SG + + SSCG ED
Sbjct: 924 DSGN--PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLED 962
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 114/270 (42%), Gaps = 37/270 (13%)
Query: 262 LGMFANMLKDSSLKP---DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
LG A LK S P D L C + + K G IH ++I F + +
Sbjct: 11 LGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTK 70
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI Y KVG +VIA + DG P R + V
Sbjct: 71 LIIFYVKVG-----------------DVIAARNVFDGM-------PERSV---------V 97
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+WTAM+ GY QNG + A LF M G K N +T + L +SL LD G Q+
Sbjct: 98 SWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCI 157
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+ +L V +AL+ +SK G + A +F + R + VSW +MI A G +++
Sbjct: 158 QKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMER-DVVSWNAMIGGYAVQGFADDS 216
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F ML G+ PD T VL A GG
Sbjct: 217 FCMFRSMLRGGLVPDCYTLGSVLRASAEGG 246
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 45/254 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA I+ G ++KNSL+ YAK ++ + +FD + K+ +WN +++A A
Sbjct: 1270 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 1329
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G C + A+++F EM V QF+ +
Sbjct: 1330 HG-----CG--------------------------EEALKIFGEMRNVGVNLDQFSFSGG 1358
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD-----EMMAKAVFDGM 206
LA+ L L G+++H V+K G ++VTN+ ++MY K G+ +M+ + + +
Sbjct: 1359 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI-NRS 1417
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYDFEAL 262
RL SWN+++S G AR F +M+ + D VT+ S+++ + G E L
Sbjct: 1418 RL----SWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 1473
Query: 263 GMFANMLKDSSLKP 276
+ +M ++ + P
Sbjct: 1474 AYYDSMTREFGVFP 1487
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H +IK G + + N+ M+ Y K + K+ + ++ SWN ++SA+A+
Sbjct: 1371 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 1430
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G A E F+ M P D V++ +++ N G + + M + +F
Sbjct: 1431 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR------EFG 1484
Query: 148 VTSVLASCTALGDL 161
V + C + DL
Sbjct: 1485 VFPGIEHCVCIIDL 1498
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 274/787 (34%), Positives = 428/787 (54%), Gaps = 56/787 (7%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P P S+ E +A L+ S G+L+H + L NSL+N + T+
Sbjct: 7 PTPRSVRQAAELHAVLVAS---------GRLLHPPS-------ASHLLNSLVNCFTPTDP 50
Query: 64 I--SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ YA +FD MP T +F+ T + +
Sbjct: 51 LHLRYALCLFDRMPCSTF---------------------LFD----------TALRACFR 79
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSA--GKKVHSFVVKTGLSGC 179
++ + ++ M + V FT L C A G + +H+ +T L
Sbjct: 80 ASSGPESPLILYRRMRRTGVCTDAFTF-HFLFKCCARGRAHVLLCQMLHAACFRTMLPSA 138
Query: 180 VN-VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
V V+N +++MY ++G A+ FD + +K+ +W V+S G LD A
Sbjct: 139 VPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSP 198
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
R+V++W +I+GYS+ G EA+ F +ML D ++PD+ T+ LSACA L+ L G+
Sbjct: 199 ARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDG-IEPDEVTVIGLLSACAQLKDLVFGR 257
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
+H + +G + ALI YAK G + A ++ + G ++ ++DGY K
Sbjct: 258 SLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGR-RPQSWNAMIDGYCK 316
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
+G + AR +FD + DRD+V + +++ GY G ++A+ LF M R + +N+T+ ++
Sbjct: 317 LGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSL 376
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L+ +SL +L G+ +HA + + + AL+ MY K G + A VF + R +
Sbjct: 377 LTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVR-D 435
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+W++MI LA +G+G+ A++ F M G +P+ +TY+ +LTAC+H L+++G+ Y+
Sbjct: 436 VHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFE 495
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M+ +H I+P H+ M+DLLGR+GLL EA + + MP++P+ V W S+LSACRVHK+
Sbjct: 496 EMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDA 555
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+L + AAE LL +EPD Y L N+Y +WEDA+ IR+ M+ GVKK G+S + +
Sbjct: 556 NLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITV 615
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
+VH F V D HPQ I M +I +K +G+ P T+ + DV+E+ KE L HS
Sbjct: 616 AGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHALLAHS 675
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EK+AIAFGLIS N L I+KNLRVC DCHSAIK I ++ +REI+VRD +RFHHF+ G
Sbjct: 676 EKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFHHFRDGT 735
Query: 779 CSCRDYW 785
CSC D+W
Sbjct: 736 CSCNDFW 742
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/643 (39%), Positives = 357/643 (55%), Gaps = 67/643 (10%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT S+L SC A + GK++H+ V G + L+N+Y V D + +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC-VCDSLSS--- 128
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
AR FD++ + ++ WN +I GY+ NG A+
Sbjct: 129 ---------------------------ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAV 161
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ M D L PD FT L ACA L ++ G++IH ++++T ++ VG ALI
Sbjct: 162 QLYYQMF-DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALI-- 218
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
D Y K G +G AR +FD + RD V W +
Sbjct: 219 -------------------------------DMYAKCGCVGSAREVFDKILVRDAVLWNS 247
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
ML Y QNG + L MV G +P TL +S S+ A+L G+++H + R
Sbjct: 248 MLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQE 307
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S V AL+ MY+K G++ AR +F + ++ VSW +MI A HG EA+ LF
Sbjct: 308 FESHDKVKTALVDMYAKCGSVRVARNLFERLGVKR-VVSWNAMITGYAMHGHATEALDLF 366
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M + KPDHIT+VGVL+AC+HGGL+E+G ++ M +KI PT H+ MVDLLG
Sbjct: 367 EEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGH 425
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+G L EAYN I M + PD WG+LL++C++H N++LG+IA E+L+ +EPD++G Y L
Sbjct: 426 SGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVIL 485
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ GKWE A +RK M +KK+ SW++++NKVH F D HP D IY+++
Sbjct: 486 SNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSEL 545
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ +KE G+ P T SV HDVE+D K M+ HSE+LAIAFGLISTP T L I KNL
Sbjct: 546 ERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNL 605
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+C DCH AIKFI K+ +REI VRD R+HHFK G+CSC DYW
Sbjct: 606 RICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 220/502 (43%), Gaps = 106/502 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA LLQS + + GK +HA++ G + L+N Y +S+S A+ +FD +P
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ WN ++ Y +W G ++ A++++ +
Sbjct: 138 KHNIFLWNVLIRGY----------------------AWN---------GPYEAAVQLYYQ 166
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++P FT VL +C AL + G+++H VV+TG V V +L++MYAK G
Sbjct: 167 MFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGC 226
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD + +++ W NSM+A YSQN
Sbjct: 227 VGSAREVFDKILVRDAVLW-------------------------------NSMLAAYSQN 255
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G+ L + + M+ + L+P + TL + +SA A+ L G+++H R EF++ V
Sbjct: 256 GHPDACLSLCSEMVL-TGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKV 314
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
AL+ YAK G V +A+ + E+ G+ +
Sbjct: 315 KTALVDMYAKCGSVRVARNLFERLGV---------------------------------K 341
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
VV+W AM+ GY +G +A++LF M R KP++ T +LS S L+ G
Sbjct: 342 RVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFF 400
Query: 436 ASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
+ +R + ++ ++ + +G ++ A + + ++ W +++ + H
Sbjct: 401 ETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHAN 460
Query: 494 --LGEEAIQLFERMLELGIKPD 513
LGE A+ ER++EL +PD
Sbjct: 461 VELGEIAL---ERLIEL--EPD 477
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 56/287 (19%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVF---NLMP 106
+K +L++ YAK S+ A+ +F+ + VK + SWN +++ YA G A ++F N +
Sbjct: 314 VKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA 373
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
D +++ ++ + G + F M++D + + + T + DL
Sbjct: 374 KPDHITFVGVLSACSHGGLLEEGWMFFETMIRD------YKIDPTVQHYTCMVDL----- 422
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV-SLHIHSG 225
G SG ++ +L+ M KV L + W ++ S IH+
Sbjct: 423 -------LGHSGRLDEAYNLI-MQMKV--------------LPDSGVWGALLNSCKIHAN 460
Query: 226 RLDLARAQFDQMIE---RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
++L +++IE D + + Y+Q G +E + ++ D LK
Sbjct: 461 -VELGEIALERLIELEPDDAGNYVILSNIYAQAG-KWEGVAKLRKLMTDRRLKKS----- 513
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
AC+ +E + ++HA++ D + P+ + + S +VGG+
Sbjct: 514 ---IACSWIE---VKNKVHAFL---SGDTSHPLSDEIYSELERVGGL 551
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/698 (36%), Positives = 410/698 (58%), Gaps = 41/698 (5%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G + A ++F+ +P D + +T+I G AI+++ + + + P +
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C GD K+VH + G+ V V N+L++ Y K K V
Sbjct: 172 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGK------CKCV---------- 215
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+ AR FD ++ RDVV+W S+ + Y + G+ + + +F M S
Sbjct: 216 ---------------EGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM-GWS 259
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+KP+ T++S L ACA L+ LK GK+IH + +R V +AL+S YAK V A
Sbjct: 260 GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREA 319
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF-----DSLRDRDVVAWTAMLVGY 387
+ + + + + +V+++ +L Y K + +F D +R D W A++ G
Sbjct: 320 RMVFDL--MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR-ADEATWNAVIGGC 376
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+NG +++AVE+FR M + G KPN T+S++L S +L GK+IH R + L
Sbjct: 377 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 436
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ + AL+ MY+K G++N +R VF+++ R++ V+W +MI+A A HG G+EA+ LF++ML
Sbjct: 437 TSTTALLYMYAKCGDLNLSRNVFDMMR-RKDVVAWNTMIIANAMHGNGKEALFLFDKMLL 495
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
++P+ +T+ GVL+ C+H LVE+G + +N M H ++P +H++ +VD+ RAG L
Sbjct: 496 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLN 555
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EAY FI+ MP+EP AWG+LL+ACRV+KN++L KI+A+KL IEP+N G Y +L N+
Sbjct: 556 EAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILV 615
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ W +A+ +R MK G+ KT G SW+Q+ NKVH F V D + + D IYN + ++ +
Sbjct: 616 TAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVE 675
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++K G+ PDT VL D++++ K + L +HSEKLA+AFG+++ +T+R+ KNLR+C D
Sbjct: 676 KMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGD 735
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+AIK++ K+V IVVRD+ RFHHFK G CSC+D W
Sbjct: 736 CHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 250/527 (47%), Gaps = 80/527 (15%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VH +CG+ VF+ N+L++ Y K + + A++VFD++ V
Sbjct: 184 KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV---------------- 227
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
RD VSWT++ Y + G + + +F EM V P TV+S+L
Sbjct: 228 ---------------RDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSIL 272
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C L DL +GK++H F V+ G+ + V ++L+++YAK A+ VFD M ++V
Sbjct: 273 PACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVV 332
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
SWN V++ + + + + F +M + D TWN++I G +NG EA+ MF M
Sbjct: 333 SWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM 392
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
K KP++ T++S L AC+ E L++GK+IH Y+ R + KVG
Sbjct: 393 QK-MGFKPNEITISSILPACSFSENLRMGKEIHCYVFR----------------HWKVG- 434
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ + T LL Y K GD+ +R +FD +R +DVVAW M++
Sbjct: 435 ----------------DLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANA 478
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR----SGEA 444
+G K+A+ LF M+ +PN+ T + +LS S ++ G QI S R +A
Sbjct: 479 MHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDA 538
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ S ++ +YS+AG +N A + + +W +++ A + E A ++
Sbjct: 539 NHYS---CVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKK 595
Query: 505 MLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
+ E I+P++ YV + + + + +MK I TP
Sbjct: 596 LFE--IEPNNPGNYVSLFNILVTAKMWSEASQVRILMKE-RGITKTP 639
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/698 (36%), Positives = 410/698 (58%), Gaps = 41/698 (5%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G + A ++F+ +P D + +T+I G AI+++ + + + P +
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C GD K+VH + G+ V V N+L++ Y K K V
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGK------CKCV---------- 129
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+ AR FD ++ RDVV+W S+ + Y + G+ + + +F M S
Sbjct: 130 ---------------EGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM-GWS 173
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+KP+ T++S L ACA L+ LK GK+IH + +R V +AL+S YAK V A
Sbjct: 174 GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREA 233
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF-----DSLRDRDVVAWTAMLVGY 387
+ + + + + +V+++ +L Y K + +F D +R D W A++ G
Sbjct: 234 RMVFDL--MPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR-ADEATWNAVIGGC 290
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+NG +++AVE+FR M + G KPN T+S++L S +L GK+IH R + L
Sbjct: 291 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 350
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ + AL+ MY+K G++N +R VF+++ R++ V+W +MI+A A HG G+EA+ LF++ML
Sbjct: 351 TSTTALLYMYAKCGDLNLSRNVFDMMR-RKDVVAWNTMIIANAMHGNGKEALFLFDKMLL 409
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
++P+ +T+ GVL+ C+H LVE+G + +N M H ++P +H++ +VD+ RAG L
Sbjct: 410 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLN 469
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EAY FI+ MP+EP AWG+LL+ACRV+KN++L KI+A+KL IEP+N G Y +L N+
Sbjct: 470 EAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILV 529
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ W +A+ +R MK G+ KT G SW+Q+ NKVH F V D + + D IYN + ++ +
Sbjct: 530 TAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVE 589
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++K G+ PDT VL D++++ K + L +HSEKLA+AFG+++ +T+R+ KNLR+C D
Sbjct: 590 KMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGD 649
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+AIK++ K+V IVVRD+ RFHHFK G CSC+D W
Sbjct: 650 CHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 226/464 (48%), Gaps = 76/464 (16%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VH +CG+ VF+ N+L++ Y K + + A++VFD++ V
Sbjct: 98 KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV---------------- 141
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
RD VSWT++ Y + G + + +F EM V P TV+S+L
Sbjct: 142 ---------------RDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSIL 186
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C L DL +GK++H F V+ G+ + V ++L+++YAK A+ VFD M ++V
Sbjct: 187 PACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVV 246
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
SWN V++ + + + + F +M + D TWN++I G +NG EA+ MF M
Sbjct: 247 SWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM 306
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
K KP++ T++S L AC+ E L++GK+IH Y+ R + KVG
Sbjct: 307 QK-MGFKPNEITISSILPACSFSENLRMGKEIHCYVFR----------------HWKVG- 348
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ + T LL Y K GD+ +R +FD +R +DVVAW M++
Sbjct: 349 ----------------DLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANA 392
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR----SGEA 444
+G K+A+ LF M+ +PN+ T + +LS S ++ G QI S R +A
Sbjct: 393 MHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDA 452
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ S ++ +YS+AG +N A + + +W +++ A
Sbjct: 453 NHYS---CVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 210/462 (45%), Gaps = 73/462 (15%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++ + ++ G + AR FD + + D T +++I+ + +G EA+ ++++ L++ +KP
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSS-LQERGIKP 76
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D + ACA K++H R + VGNALI Y K VE A+++
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV- 135
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
FD L RDVV+WT++ Y + G +
Sbjct: 136 --------------------------------FDDLVVRDVVSWTSLSSCYVKCGFPRKG 163
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+++FR M G KPN T+S++L + L L GK+IH A+R G +L V +AL+++
Sbjct: 164 MDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSL 223
Query: 457 YSKAGNINAARRVFNL------IHW----------------------------RQETVSW 482
Y+K ++ AR VF+L + W R + +W
Sbjct: 224 YAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATW 283
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
++I ++G EEA+++F +M ++G KP+ IT +L AC+ + G+ + +
Sbjct: 284 NAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFR 343
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
K+ S A ++ + + G L + N + M DVVAW +++ A +H N
Sbjct: 344 HWKVGDLTSTTA-LLYMYAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANAMHGNGKEAL 401
Query: 603 IAAEKLLL--IEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+K+LL ++P NS ++ + + S E+ I SM
Sbjct: 402 FLFDKMLLSRVQP-NSVTFTGVLSGCSHSRLVEEGVQIFNSM 442
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 177/339 (52%), Gaps = 20/339 (5%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP ++ S L A L +LKS GK +H ++ G+ +++F+ ++L++ YAK S
Sbjct: 177 PNPMTVSSILPACAEL--KDLKS-----GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLS 229
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV-----SWTTIIV 118
+ A+ VFD MP + + SWN +L+AY K + +F L +RD V +W +I
Sbjct: 230 VREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF-LKMSRDGVRADEATWNAVIG 288
Query: 119 TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG 178
E GR + A+ MF +M + P + T++S+L +C+ +L GK++H +V + G
Sbjct: 289 GCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVG 348
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM- 237
+ T +LL MYAK GD +++ VFD MR K+V +WN ++ + G A FD+M
Sbjct: 349 DLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKML 408
Query: 238 ---IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
++ + VT+ +++G S + E + +F +M +D ++PD + + + +L
Sbjct: 409 LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRL 468
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+ + +I + T AL++ VE+A+
Sbjct: 469 ---NEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAK 504
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 138/299 (46%), Gaps = 10/299 (3%)
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+ +GD AR++FD++ D + ++ +GL+ +A++++ S+ G KP+
Sbjct: 23 LNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFL 82
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
A + K++H A R G S + V NALI Y K + ARRVF+ + R
Sbjct: 83 AAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR 142
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ VSWTS+ + G + + +F M G+KP+ +T +L AC ++ G+
Sbjct: 143 -DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEI 201
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
+ H + +++V L + ++EA + MP DVV+W +L+A +K
Sbjct: 202 HGFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP-HRDVVSWNGVLTAYFKNK 259
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCN-LYSSC---GKWEDAANIRKSMKYVGVKKTQ 651
+ G L + D A A N + C G+ E+A + + M+ +G K +
Sbjct: 260 EYEKG---FSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VF V L S +L YAK G L+L+ VF++M +D V+W T+I+ G K A
Sbjct: 341 VFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEA 400
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL-SGCVNVTNSLLN 188
+ +F +M+ +V P T T VL+ C+ + G ++ + + + L N + +++
Sbjct: 401 LFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVD 460
Query: 189 MYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+Y++ G A GM ++ S+W +++ ++LA+ ++ E
Sbjct: 461 IYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFE 512
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 284/846 (33%), Positives = 433/846 (51%), Gaps = 147/846 (17%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKC--GL-HLSVFL-KNSLMNFYAKTESISYAKKV 70
F + SN ++ F K H I+C G+ H S L N L++ +K + A+K+
Sbjct: 2 FNIYFQTSNFFTKCNFHFK--HPLFIRCIHGIAHYSSNLDSNQLLSELSKNGRVDEARKL 59
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD+MP + +WN ++SAYA G L A ++FN P +S++W++++ Y + G +
Sbjct: 60 FDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGL 119
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM- 189
R F +M D P+Q+T+ SVL +C+ L L GK +H + +K L + V L++M
Sbjct: 120 RQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMY 179
Query: 190 -------------------------------YAKVGDEMMAKAVFDGMRLK--------- 209
YA+ G+ + A F MR +
Sbjct: 180 SKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTF 239
Query: 210 ------------------------------NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
NV + +V ++ G L AR D M
Sbjct: 240 PSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEI 299
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
DVV WNSMI G +GY EAL +F M + ++ D FT S L + A+ + LK+G+
Sbjct: 300 DDVVCWNSMIVGCVTHGYMEEALVLFHKM-HNRDIRIDDFTYPSVLKSLASCKNLKIGES 358
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H+ I+T FDA V NAL+ D Y K
Sbjct: 359 VHSLTIKTGFDACKTVSNALV---------------------------------DMYAKQ 385
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
G++ A +F+ + D+DV++WT+++ GY NG ++ A++LF M + + ++ +
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S + L ++ G+Q+HA+ ++S S LS N+LITMY+K G + A RV + + R
Sbjct: 446 SACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRN-V 504
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
+SWT++IV AQ+ GLVE GQ Y+
Sbjct: 505 ISWTAIIVGYAQN-----------------------------------GLVETGQSYFES 529
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M+ V+ IKP +A M+DLLGRAG + EA + + M +EPD W SLLSACRVH NL+
Sbjct: 530 MEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLE 589
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ A + L+ +EP NS Y L N++S G+WEDAA+IR++MK +G+ + G+SW++++
Sbjct: 590 LGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMK 649
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
++VH F ED HP IY+K+ ++ IKE G VPD L D++E+ KE+ L +HSE
Sbjct: 650 SQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSE 709
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLA+AFGL++ + +RI KNLRVC DCHSA+K+I + R I++RD FHHF +G C
Sbjct: 710 KLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKC 769
Query: 780 SCRDYW 785
SC D+W
Sbjct: 770 SCGDFW 775
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/759 (34%), Positives = 406/759 (53%), Gaps = 97/759 (12%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
+N +G+L+H + K GL L F+ +L++ Y K I A+ +FD+M
Sbjct: 44 KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQ----------- 92
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
RD V+WT +I Y E G+ ++ +F +M ++ V+P +
Sbjct: 93 --------------------ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKV 132
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+ +V+ +C LG + + + ++ + V + ++++MYAK
Sbjct: 133 AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK-------------- 178
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
G ++ AR FD+M E++V++W++MIA Y +G +AL +F
Sbjct: 179 -----------------CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 221
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML S + PDK TLAS L AC++L+ L++G+ IH + + D V AL+ Y K
Sbjct: 222 MMLS-SGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 280
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+E AR +FD + +RD+V WT M+ G
Sbjct: 281 REIE---------------------------------DARFLFDKMPERDLVTWTVMIGG 307
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y + G +++ LF M EG P+ + ++ + L ++ + I R
Sbjct: 308 YAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD 367
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ + A+I M++K G + +AR +F+ + + +SW++MI A HG G +A+ LF ML
Sbjct: 368 VILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGRKALDLFPMML 426
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
GI P+ IT V +L AC+H GLVE+G R++++M + ++ H+ +VDLLGRAG L
Sbjct: 427 RSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRL 486
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EA IE+M +E D WG+ L ACR HK++ L + AA LL ++P N G Y L N+Y
Sbjct: 487 DEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIY 546
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G+WED A R M +KK G++W+++ NK H F V D HP+ IY + +
Sbjct: 547 ANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLG 606
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
++++ +G+VPDT VLHDV+E++K +L HSEKLAIAFGLI+TPE+T +RI+KNLRVC
Sbjct: 607 NKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCG 666
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+ K + + R I+VRDA RFHHFK+G CSC DYW
Sbjct: 667 DCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 226/485 (46%), Gaps = 72/485 (14%)
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
+ ++G + N F E+++ P +T+ V+ +C L +L G+ +H V K GL
Sbjct: 5 FAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 64
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V +L++MY K + A+ +FD M+ +++ +W V+
Sbjct: 65 HFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVM---------------------- 102
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
I GY++ G E+L +F M ++ + PDK + + + ACA L + +
Sbjct: 103 ---------IGGYAECGKANESLVLFEKM-REEGVVPDKVAMVTVVFACAKLGAMHKARI 152
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
I YI R +F +G A+I YAK G VE
Sbjct: 153 IDDYIQRKKFQLDVILGTAMIDMYAKCGCVE----------------------------- 183
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
AR IFD + +++V++W+AM+ Y +G + A++LFR M+ G P+ TL+++L
Sbjct: 184 ----SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S L +L G+ IH + G V AL+ MY K I AR +F+ + R +
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER-DL 298
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
V+WT MI A+ G E++ LF++M E G+ PD + V V+ AC G + + + +
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH---- 595
++ K + +M+D+ + G ++ A + M E +V++W ++++A H
Sbjct: 359 IQR-KKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGR 416
Query: 596 KNLDL 600
K LDL
Sbjct: 417 KALDL 421
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 166/346 (47%), Gaps = 41/346 (11%)
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M+ G+++ G G F +++ +PD +TL + AC +L+ L++G+ IH + +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIR-CGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
D L+ L+D Y+K +I AR
Sbjct: 60 GLD---------------------------------LDHFVCAALVDMYVKCREIEDARF 86
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+FD +++RD+V WT M+ GY + G +++ LF M EG P+ + ++ + L +
Sbjct: 87 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 146
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ + I R + + A+I MY+K G + +AR +F+ + + +SW++MI
Sbjct: 147 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIA 205
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A HG G +A+ LF ML G+ PD IT +L AC+ ++ G+ +++ V+K
Sbjct: 206 AYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHI---VYKFG 262
Query: 548 PTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
HF A++VD+ G+ +++A + MP E D+V W ++
Sbjct: 263 LDLDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGG 307
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 9/237 (3%)
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G+ + G + FR ++R G +P+NYTL ++ L +L G+ IH + G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
V AL+ MY K I AR +F+ + R + V+WT MI A+ G E++ LF
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQER-DLVTWTVMIGGYAECGKANESLVLF 119
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E+M E G+ PD + V V+ AC G + + + + ++ K + +M+D+ +
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR-KKFQLDVILGTAMIDMYAK 178
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDLGKIAAEKLLLIEPDN 615
G ++ A + M E +V++W ++++A H K LDL ++ +L PD
Sbjct: 179 CGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML--PDK 232
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/619 (39%), Positives = 366/619 (59%), Gaps = 12/619 (1%)
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
G+S V +SLL+ Y + G A++V DGM + V W+ +++ H G + A
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 235 DQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
++M +E +V+TWN +++G +++G +A+ M + L PD ++ LSA +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFL-PDATGVSCALSAVGD 168
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+ + +G+Q+H Y+++ V ALI Y K G + ++ ++S S+++V +
Sbjct: 169 VGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDES--SHMDVASCN 226
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
L+ G + + A R+F R +VV+WT+++ QNG + +AV+LFR M E
Sbjct: 227 ALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE 286
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G +PN+ T+ +L +++A+L HG+ H +LR G + V +AL+ MY+K G + A
Sbjct: 287 GIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDA 346
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
R +F + +R VSW +MI A HG E A++LF M KPD +T+ VL AC+
Sbjct: 347 RMIFEAMPYRN-VVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQ 405
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
G E+G+ Y+N M++ H I P H+A MV LLGRAG L +AY+ I MP EPD WG
Sbjct: 406 AGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWG 465
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
SLL +CRVH N+ L ++AAE L +EP+N+G Y L N+Y+S W+ +R MK VG
Sbjct: 466 SLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVG 525
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+KK +G SW++I+NKVH+ D HP AI K+ + E++ +GF P T VLHDVE
Sbjct: 526 LKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVE 585
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E K+ +L HSEKLA+A GLIST T L+++KNLR+C DCH A+KFI REI VR
Sbjct: 586 EQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVR 645
Query: 767 DATRFHHFKKGLCSCRDYW 785
D RFHHFK G CSC DYW
Sbjct: 646 DTNRFHHFKDGKCSCADYW 664
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 200/407 (49%), Gaps = 20/407 (4%)
Query: 43 GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVF 102
G+ F+ +SL++ Y + + + A+ V D MP +T+ W+ +++A+A G + A +
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 103 NLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
M PN ++W ++ N GR ++A+ V M + LP V+ L++
Sbjct: 110 ERMRSDGVEPN--VITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVG 167
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
+GD++ G+++H +VVK G V +L++MY K G VFD +V+S N
Sbjct: 168 DVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNA 227
Query: 217 VVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+V+ + + L L R + IE +VV+W S++A QNG D EA+ +F M +
Sbjct: 228 LVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREM-QSE 286
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
++P+ T+ L A AN+ L G+ H + +R F VG+AL+ YAK G V A
Sbjct: 287 GIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDA 346
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYE 388
+ I E + Y NV+++ ++ GY G+ A R+F S++ D+V +T +L
Sbjct: 347 RMIFE--AMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACS 404
Query: 389 QNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
Q G ++ F M + G P + M+++ LD I
Sbjct: 405 QAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDI 451
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 155/350 (44%), Gaps = 21/350 (6%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ +H ++K G L + +L++ Y K +VFDE + S N +++ +
Sbjct: 174 VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLS 233
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ ++ A +F R + VSWT+I+ + GR A+ +F EM + + P
Sbjct: 234 RNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSV 293
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T+ VL + + L G+ H F ++ G + V ++L++MYAK G A+ +F+ M
Sbjct: 294 TIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM 353
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYDFEAL 262
+NV SWN ++ + G + A F M + D+VT+ ++ SQ G+ E
Sbjct: 354 PYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV-GNALIS 321
F M + P A ++ KL I I + F+ G + G+ L S
Sbjct: 414 SYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDI---INQMPFEPDGCIWGSLLGS 470
Query: 322 C-------YAKVGGVEIAQKIVEQSGISYL--NVIAFTTLLDGYIKIGDI 362
C A+V + Q E +G L N+ A + DG ++ D+
Sbjct: 471 CRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDM 520
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 161/371 (43%), Gaps = 53/371 (14%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY--IIRTEFDATGPVGNALISCYA 324
N L+ S PD L S L +C+ L + A + R F V ++L+ Y
Sbjct: 12 NFLRHVSFPPDPRLLPSALKSCSALRLARALHAAAAVAGVSRDAF-----VASSLLHAYL 66
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAW 380
+ G A+ +++ G+ + V+ ++ L+ + GD A + + +R + +V+ W
Sbjct: 67 RFGATADARSVLD--GMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITW 124
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
++ G ++G +DAV M EG P+ +S LS + + G+Q+H ++
Sbjct: 125 NGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVK 184
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFN--------------------------LIH 474
+G V+ ALI MY K G + RVF+ L
Sbjct: 185 AGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRL 244
Query: 475 WRQ--------ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+R+ VSWTS++ Q+G EA+ LF M GI+P+ +T VL A +
Sbjct: 245 FREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFAN 304
Query: 527 GGLVEQGQ--RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+ G+ +++ K H S ++VD+ + G +++A E MP +VV+
Sbjct: 305 IAALMHGRSAHCFSLRKGFHHDIYVGS---ALVDMYAKCGRVRDARMIFEAMPYR-NVVS 360
Query: 585 WGSLLSACRVH 595
W +++ +H
Sbjct: 361 WNAMIGGYAMH 371
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 281/846 (33%), Positives = 433/846 (51%), Gaps = 147/846 (17%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKC--GL-HLSVFL-KNSLMNFYAKTESISYAKKV 70
F + SN ++ F K H I+C G+ H S L N L++ +K + A+K+
Sbjct: 2 FNIYFQTSNFFTKCNFHFK--HPLFIRCIHGIAHYSSNLDSNQLLSELSKNGRVDEARKL 59
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD+MP + +WN ++SAYA G L A ++FN P ++S++W++++ Y + G +
Sbjct: 60 FDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGL 119
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM- 189
R F +M D P+Q+T+ SVL +C+ L L GK +H + +K L + V L++M
Sbjct: 120 RQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMY 179
Query: 190 -------------------------------YAKVGDEMMAKAVFDGMRLK--------- 209
YA+ G+ + A F MR +
Sbjct: 180 SKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTF 239
Query: 210 ------------------------------NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
NV + +V ++ G L AR D M
Sbjct: 240 PSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEI 299
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
DVV WNSMI G +GY EAL +F M + ++ D FT S L + A+ + LK+G+
Sbjct: 300 DDVVCWNSMIVGCVTHGYMEEALVLFHKM-HNRDIRIDDFTYPSVLKSLASCKNLKIGES 358
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H+ I+T FDA V NAL+ D Y K
Sbjct: 359 VHSLTIKTGFDACKTVSNALV---------------------------------DMYAKQ 385
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
G++ A +F+ + D+DV++WT+++ GY NG ++ A++LF M + + ++ +
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S + L ++ G+Q+HA+ ++S S LS N+LITMY+K G +
Sbjct: 446 SACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL---------------- 489
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
E+AI++F+ M + I++ ++ GLVE GQ Y+
Sbjct: 490 ----------------EDAIRVFDSMETRNV----ISWTAIIVGYAQNGLVETGQSYFES 529
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M+ V+ IKP H+A M+DLLGRAG + EA + + M +EPD W SLLSACRVH NL+
Sbjct: 530 MEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLE 589
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ A + L+ +EP NS Y L N++S G+WEDAA+IR++MK +G+ K G+SW++++
Sbjct: 590 LGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMK 649
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
++VH F ED HP IY+K+ ++ IKE G VPD L D++E+ KE+ L +HSE
Sbjct: 650 SQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSE 709
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLA+AFGL++ + +RI KNLRVC DCHSA+K+I + R I++RD FHHF +G C
Sbjct: 710 KLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKC 769
Query: 780 SCRDYW 785
SC D+W
Sbjct: 770 SCGDFW 775
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/650 (36%), Positives = 383/650 (58%), Gaps = 67/650 (10%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
++ ++ PT S++ +C +L+ + +HS + ++ L+G + NSL++MY K G
Sbjct: 53 LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCG- 111
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
AV D AR FD + RDVV+W +I GY+QN
Sbjct: 112 -----AVSD-------------------------ARHVFDGIPTRDVVSWTYLITGYAQN 141
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EALG+ +ML+ + +P FT S L A +G+Q+HA ++ D V
Sbjct: 142 DMPAEALGLLPDMLR-ARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYV 200
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G+AL+ YA+ +++A R+FD L +
Sbjct: 201 GSALLDMYARCQQMDMAI---------------------------------RVFDWLDSK 227
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ V+W A++ G+ + G + + F M R G ++T S++ S + + +L+ G+ +H
Sbjct: 228 NEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVH 287
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A ++SG+ + V+N ++ MY+K+G++ AR+VF+ + R + V+W +M+ A AQ+GLG
Sbjct: 288 AHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQR-DLVTWNTMLTAFAQYGLG 346
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+EA+ FE + + GI+ + IT++ VLTAC+HGGLV++G++Y++MMK+ + ++P H+ S
Sbjct: 347 KEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYVS 405
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
VDLLGRAGLL+EA F+ MP+EP WG+LL ACR+HKN +G+ AA+ + ++P++
Sbjct: 406 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPED 465
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+G L N+Y+S G+W+DAA +RK MK GVKK SWV+I+N VH+F +D HP+
Sbjct: 466 TGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKS 525
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ IY ++ IK+ G+VP+T VL ++E +E L++HSEK+A+AF LI+ P T
Sbjct: 526 EEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGAT 585
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RIMKN+R+C DCHSA +++ ++ REIVVRD RFHHF G CSC DYW
Sbjct: 586 IRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 96/418 (22%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y ++ + +S+N + +H+ + + L FL NSL++ Y K ++S A+ VFD +P
Sbjct: 65 YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + SW +++ YA+ D+ E L+P +
Sbjct: 125 TRDVVSWTYLITGYAQN---DMPAEALGLLP----------------------------D 153
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ + P+ FT TS L + A G G+++H+ VK L V V ++LL+MYA+
Sbjct: 154 MLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQ 213
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MA VFD + KN SW N++IAG+++
Sbjct: 214 MDMAIRVFDWLDSKNEVSW-------------------------------NALIAGFARK 242
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G L FA M ++ FT +S SA A + L+ G+ +HA++I++ T V
Sbjct: 243 GDGETTLMKFAEMQRN-GFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFV 301
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N ++ YAK G +++D AR++FD + R
Sbjct: 302 ANTILGMYAKSG-----------------------SMVD----------ARKVFDRVDQR 328
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D+V W ML + Q GL K+AV F + + G + N T ++L+ S + GKQ
Sbjct: 329 DLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQ 386
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 38/326 (11%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++L L P S ++ACA + L + IH+++ R+ G + N+LI Y K
Sbjct: 51 DLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKC 110
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G V AR +FD + RDVV+WT ++ G
Sbjct: 111 GAVS---------------------------------DARHVFDGIPTRDVVSWTYLITG 137
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QN + +A+ L M+R +P+ +T ++ L + + G+Q+HA A++
Sbjct: 138 YAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDED 197
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V +AL+ MY++ ++ A RVF+ + + E VSW ++I A+ G GE + F M
Sbjct: 198 VYVGSALLDMYARCQQMDMAIRVFDWLDSKNE-VSWNALIAGFARKGDGETTLMKFAEMQ 256
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G H TY V +A G +EQG+ + +M+K+ K+ ++ +++ + ++G
Sbjct: 257 RNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVAN--TILGMYAKSGS 314
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSA 591
+ +A + + + D+V W ++L+A
Sbjct: 315 MVDARKVFDRVD-QRDLVTWNTMLTA 339
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 144/294 (48%), Gaps = 39/294 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +K L V++ ++L++ YA+ + + A +VFD + K SWN +++ +A
Sbjct: 181 IGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFA 240
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
++G + TT++ F EM ++ T FT +S
Sbjct: 241 RKGDGE-----------------TTLM--------------KFAEMQRNGFGATHFTYSS 269
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V ++ +G L G+ VH+ ++K+G V N++L MYAK G + A+ VFD + ++
Sbjct: 270 VFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRD 329
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+ +WN +++ G A A F+++ I+ + +T+ S++ S G E F
Sbjct: 330 LVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYF- 388
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
+M+KD +++P+ + +S L + L K+ ++ + + T V AL+
Sbjct: 389 DMMKDYNVEPE---IDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 439
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/545 (42%), Positives = 347/545 (63%), Gaps = 35/545 (6%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
D V+WNS+I G + G++ +AL F M + +K D++TL S L++ A+++ ++ +
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKM-RSRDMKIDEYTLPSVLNSFASMKVMQNAISV 63
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H II+T F+A V NALI YAK G
Sbjct: 64 HCLIIKTGFEAYKLVNNALIDMYAKQ---------------------------------G 90
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
+ A +F + D+DVV+WT+++ GY NG ++A++LF M G P+ ++++LS
Sbjct: 91 KLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLS 150
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L +D G+QIHA+ ++SG SSLSV N+L+TMY+K G+I A R F+ + R + +
Sbjct: 151 ACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTR-DVI 209
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SWT++IV AQ+G G+ ++Q +++M+ G KPD+IT++G+L AC+H GL+ G+ Y+ M
Sbjct: 210 SWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAM 269
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
V+ IKP P H+A M+DLLGR+G L EA + M + PD V W +LL+ACRVHK L+L
Sbjct: 270 DKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELEL 329
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G++AA+ L +EP NS Y L N+YS+ GKWEDAA IR+ M+ G+ K G+SW++ +
Sbjct: 330 GEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNS 389
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KV F ED HP R+ IY+K+ +I IKE G+VPD + LHD +++VKE L +HSEK
Sbjct: 390 KVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKELGLAYHSEK 449
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+AFGL++ P+ +RI KNLRVC DCH+A+K+ K+ R I++RD+ FHHF +G CS
Sbjct: 450 LAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVYARHIILRDSNCFHHFTEGRCS 509
Query: 781 CRDYW 785
C DYW
Sbjct: 510 CGDYW 514
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 196/444 (44%), Gaps = 77/444 (17%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
M D VSW ++I+ G ++A+ F +M + ++T+ SVL S ++ +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
VH ++KTG V N+L++MYAK G A VF M K+V SW
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSW---------- 110
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
S++ GYS NG EA+ +F M + S + PD+ +AS
Sbjct: 111 ---------------------TSLVTGYSHNGSYEEAIKLFCKM-RISGVYPDQIAVASV 148
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
LSACA L + G+QIHA ++++ +++ V N+L++ YAK G + A
Sbjct: 149 LSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDAN----------- 197
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
R FD++ RDV++WTA++VGY QNG K +++ + M+
Sbjct: 198 ----------------------RAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMI 235
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNI 463
G KP+ T +L S L G+ A G +I + ++G +
Sbjct: 236 ATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKL 295
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ-LFERMLELGIKP-DHITYV 518
A+ + N + + V W +++ A H LGE A + LFE ++P + + YV
Sbjct: 296 AEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFE------LEPMNSMPYV 349
Query: 519 GVLTACTHGGLVEQGQRYYNMMKN 542
+ + G E R +M++
Sbjct: 350 MLSNMYSAAGKWEDAARIRRLMRS 373
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 4/198 (2%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAKQG+LD A VF+ M ++D VSWT+++ Y+ G ++ AI++F +M V
Sbjct: 80 NALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVY 139
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P Q V SVL++C L + G+++H+ +VK+GL ++V NSL+ MYAK G + A
Sbjct: 140 PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRA 199
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYD 258
FD M ++V SW ++ + +GR + +DQMI + D +T+ ++ S NG
Sbjct: 200 FDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLL 259
Query: 259 FEALGMFANMLKDSSLKP 276
F M K +KP
Sbjct: 260 GSGRAYFEAMDKVYGIKP 277
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA ++K GL S+ + NSL+ YAK SI A + FD MP + + SW ++ YA+
Sbjct: 161 GQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQ 220
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR K++++ + +M+ P T +
Sbjct: 221 N-------------------------------GRGKHSLQFYDQMIATGTKPDYITFIGL 249
Query: 152 LASCTALGDLSAGK 165
L +C+ G L +G+
Sbjct: 250 LFACSHNGLLGSGR 263
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/704 (36%), Positives = 390/704 (55%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++ Y K R+D A +VF+ M RD +SW +II Y G + + +FV+M+ +
Sbjct: 83 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 142
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ SV A C +S G+ VHS VK S N+LL+MY+K GD
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD------- 195
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LD A+A F +M +R VV++ SMIAGY++ G EA+
Sbjct: 196 ------------------------LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 231
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + PD +T+ + L+ CA L GK++H +I + V NAL
Sbjct: 232 KLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL--- 287
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+D Y K G + A +F +R +D+++W
Sbjct: 288 ------------------------------MDMYAKCGSMQEAELVFSEMRVKDIISWNT 317
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY +N +A+ LF ++ E P+ T++ +L +SL++ D G++IH +R+
Sbjct: 318 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 377
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S V+N+L+ MY+K G + A +F+ I ++ VSWT MI HG G+EAI L
Sbjct: 378 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIAL 436
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M + GI+ D I++V +L AC+H GLV++G R++N+M++ KI+PT H+A +VD+L
Sbjct: 437 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 496
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L +AY FIENMP+ PD WG+LL CR+H ++ L + AEK+ +EP+N+G Y
Sbjct: 497 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 556
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
+ N+Y+ KWE +RK + G++K G SW++I+ +V++F D +P+ + I
Sbjct: 557 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 616
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ K+ + E G+ P T L D EE KE+ L HSEKLA+A G+IS+ +R+ KN
Sbjct: 617 LRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 676
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH KF+ KL REIV+RD+ RFH FK G CSCR +W
Sbjct: 677 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 144/600 (24%), Positives = 262/600 (43%), Gaps = 109/600 (18%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
SR +G+ VH+ +K N+L++ Y+K + AK VF EM +++ S+ ++
Sbjct: 158 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 217
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
++ YA++G LA E A+++F EM ++ + P
Sbjct: 218 IAGYAREG---LAGE----------------------------AVKLFEEMEEEGISPDV 246
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
+TVT+VL C L GK+VH ++ + L + V+N+L++MYAK G A+ VF
Sbjct: 247 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 306
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
MR+K++ SWN + I GYS+N Y EAL +F
Sbjct: 307 MRVKDIISWNTI-------------------------------IGGYSKNCYANEALSLF 335
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+L++ PD+ T+A L ACA+L G++IH YI+R + + V N+L+ YAK
Sbjct: 336 NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 395
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G + +A +FD + +D+V+WT M+
Sbjct: 396 CGALLLAHM---------------------------------LFDDIASKDLVSWTVMIA 422
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY +G K+A+ LF M + G + + + ++L S +D G + + +R
Sbjct: 423 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF-NIMRHECKI 481
Query: 446 SLSVSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+V + ++ M ++ G++ A R + + W +++ H + A ++ E
Sbjct: 482 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 541
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
++ EL +P++ Y VL A + E+ ++ + K + + + S +++ GR
Sbjct: 542 KVFEL--EPENTGYY-VLMANIYAE-AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 597
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
+ F+ P+ + L R + ++ G K LI+ + ALC
Sbjct: 598 NI------FVAGDSSNPETENIEAFLRKVRA-RMIEEGYSPLTKYALIDAEEMEKEEALC 650
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/704 (36%), Positives = 390/704 (55%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++ Y K R+D A +VF+ M RD +SW +II Y G + + +FV+M+ +
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ SV A C +S G+ VH F VK S N+LL+MY+K GD
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGD------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LD A+ F +M R VV++ SMIAGY++ G EA+
Sbjct: 347 ------------------------LDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAV 382
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + PD +T+ + L+ CA L GK++H +I + V NAL
Sbjct: 383 KLFEEM-EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNAL--- 438
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+D Y K G + A +F +R +D+++W
Sbjct: 439 ------------------------------MDMYAKCGSMREAELVFSEMRVKDIISWNT 468
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY +N +A+ LF ++ E P+ T++ +L +SL++ D G++IH +R+
Sbjct: 469 VIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S V+N+L+ MY+K G + AR +F+ I ++ VSWT MI HG G+EAI L
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLARLLFDDIT-SKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M + GI+PD I++V +L AC+H GLV++G R++N+M++ KI+PT H+A +VD+L
Sbjct: 588 FNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L +AY FIENMP+ PD WG+LL CR+H ++ L + AEK+ +EP+N+G Y
Sbjct: 648 RTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVL 707
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
+ N+Y+ KWE+ +RK + G++K G SW++I+ +V++F D +P+ + I
Sbjct: 708 MANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAF 767
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + + E G+ P T L D EE KE+ L HSEKLA+A G+IS+ +R+ KN
Sbjct: 768 LRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 827
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH KF+ KL REIV+RD+ RFH FK G CSCR +W
Sbjct: 828 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 238/518 (45%), Gaps = 87/518 (16%)
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+R T + + E G KNA+++ + + P T+ SVL C L GK+
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
V +F+ G N+ + L MY GD A VFD ++++ WN++++ SG
Sbjct: 116 VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSG- 174
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE-ALGMFANMLKDSSLKPDKFTLASTL 285
DF ++G+F M+ S ++ D +T +
Sbjct: 175 -------------------------------DFSGSIGLFKKMMS-SGVEMDSYTFSCVS 202
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
+ ++L + G+Q+H YI+++ F VGN+L++ Y K V+ A+K+ ++ ++ +
Sbjct: 203 KSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDE--MTERD 260
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
VI++ ++++GY+ NGL + + +F M+
Sbjct: 261 VISWNSIINGYV-------------------------------SNGLAEKGLSVFVQMLF 289
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G + + T+ ++ + + + G+ +H +++ + N L+ MYSK G++++
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A+ VF + R VS+TSMI A+ GL EA++LFE M E GI PD T VL C
Sbjct: 350 AKVVFREMSGRS-VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 526 HGGLVEQGQRYYNMMK-NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
L+++G+R + +K N S+ +++D+ + G ++EA M ++ D+++
Sbjct: 409 RNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGSMREAELVFSEMRVK-DIIS 465
Query: 585 WGSLLSA----CRVHKNLDLGKIAAEKLLLIE----PD 614
W +++ C ++ L L LLL+E PD
Sbjct: 466 WNTVIGGYSKNCYANEALSLF-----NLLLVEKRFSPD 498
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/798 (32%), Positives = 434/798 (54%), Gaps = 75/798 (9%)
Query: 30 FVGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
F+G +H +IK GL S + ++LM FY + S
Sbjct: 541 FLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVS------------------------- 575
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
LDLA ++F+ MP RD ++W I++ + G ++ A+++F M T+
Sbjct: 576 ------LDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTM 629
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+L C+ + G+++H +V++ G V++ NSL+ MY++ G ++ VF+ M
Sbjct: 630 VKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVD 689
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGM 264
+N+SSWN +VS + G +D A D+M ++ D+VTWNS+++GY+ +A+ +
Sbjct: 690 RNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAV 749
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
++ + LKP+ +++S L A +KLGK IH Y+IR + V LI Y
Sbjct: 750 LKR-IQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYI 808
Query: 325 KVGGVEIAQKIVEQ-------------SGISYL--------------------NVIAFTT 351
K G + A+ + + SG+SY N + + +
Sbjct: 809 KTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNS 868
Query: 352 LLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
L+ GY G A + ++ + +VV+WTA+L G +NG + +++F M EG
Sbjct: 869 LVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEG 928
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
PN+ T+S++L + L+ L GK++H+ L++ V+ AL+ MY+K+G++ +A
Sbjct: 929 VSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAA 988
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+F I + SW MI+ A GEE I +F MLE GI+PD IT+ VL+ C +
Sbjct: 989 EIFWGIK-NKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNS 1047
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV +G +Y+++M++ + + PT H + MV+LLGR+G L EA++FI MPL+PD WG+
Sbjct: 1048 GLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGA 1107
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LS+C++H++L+L +IA ++L ++EP NS Y + NLYS+ +W D IR SM V
Sbjct: 1108 FLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRV 1167
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
+ +SW+QI VH+F E HP IY ++ K+ E+K+ G++PDT + +V E
Sbjct: 1168 RVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKLVSEMKKSGYMPDTRCIHQNVSE 1227
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
KE++L H+EKLA+ +GLI +R++KN +C+DCH+ K+I L +REIV+++
Sbjct: 1228 SEKEKLLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLCSDCHTVAKYISVLRNREIVLQE 1287
Query: 768 ATRFHHFKKGLCSCRDYW 785
R HHF+ G CSC + W
Sbjct: 1288 GARVHHFRDGKCSCNNSW 1305
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 229/523 (43%), Gaps = 74/523 (14%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK-NAIRMFVEMVQDQVLP 143
+++ Y + G A VF L R+ VSW + + G K + FV + V
Sbjct: 463 LITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNF 522
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGDEMMAKAV 202
+ + V C L G +H ++K GL V ++L+ Y + +A +
Sbjct: 523 DEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKI 582
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M ++ +WN +V +++ SG W +A+
Sbjct: 583 FDEMPKRDDLAWNEIVMVNLQSG------------------NWE-------------KAV 611
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F +++ S K T+ L C+N E G+QIH Y++R F++ + N+LI
Sbjct: 612 KLF-RVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVM 670
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVV 378
Y++ G +E ++K+ + + N+ ++ +++ Y ++G + A + D + D+V
Sbjct: 671 YSRNGKLESSRKVF--NSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIV 728
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W ++L GY L++DA+ + + + G KPN ++S++L + GK IH
Sbjct: 729 TWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYV 788
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+R+ + V LI MY K G + AR VF+++ + V+W S+I L+ GL +EA
Sbjct: 789 IRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD-EKNIVAWNSLISGLSYTGLLKEA 847
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
L RM + GIK + +T+ +++ G E+ + V K+K
Sbjct: 848 EALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKA------LAVVGKMKKN--------- 892
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
+EP+VV+W ++LS C + N G
Sbjct: 893 ------------------GVEPNVVSWTAILSGCSKNGNFGNG 917
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 225/525 (42%), Gaps = 91/525 (17%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEALGMFANMLKDSSLK 275
+++ ++ G A A F R+ V+W + G + ++ L F L++ +
Sbjct: 463 LITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKYKVLEEFVR-LQNKGVN 521
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP-VGNALISCYAKVGGVEIAQK 334
D+ LA CA L LG IH +I+ D + V +AL+ Y + +++A K
Sbjct: 522 FDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANK 581
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
IFD + RD +AW +++ Q+G +
Sbjct: 582 ---------------------------------IFDEMPKRDDLAWNEIVMVNLQSGNWE 608
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
AV+LFR M G K + T+ +L V S+ G+QIH LR G S++S+ N+LI
Sbjct: 609 KAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLI 668
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MYS+ G + ++R+VFN + R + SW S++ + + G ++A+ L + M G+KPD
Sbjct: 669 VMYSRNGKLESSRKVFNSMVDRNLS-SWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDI 727
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ------- 567
+T+ +L+ L ++ + +KP S +S++ + GL++
Sbjct: 728 VTWNSLLSGYASKALSRDAIAVLKRIQ-IAGLKPNTSSISSLLQAVYEPGLVKLGKAIHG 786
Query: 568 ---------EAY------------------NFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ Y + +M E ++VAW SL+S L
Sbjct: 787 YVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSY---TGL 843
Query: 601 GKIAAEKLLLIEPD----NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
K A + +E + N+ +++L + Y++ GK E A + MK GV+ SW
Sbjct: 844 LKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNV-VSWT 902
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
I + ++ + KI+ +++E G P++A++
Sbjct: 903 AILSGC-----------SKNGNFGNGLKIFLKMQEEGVSPNSATI 936
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/704 (36%), Positives = 390/704 (55%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++ Y K R+D A +VF+ M RD +SW +II Y G + + +FV+M+ +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ SV A C +S G+ VHS VK S N+LL+MY+K GD
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LD A+A F +M +R VV++ SMIAGY++ G EA+
Sbjct: 347 ------------------------LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + PD +T+ + L+ CA L GK++H +I + V NAL
Sbjct: 383 KLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL--- 438
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+D Y K G + A +F +R +D+++W
Sbjct: 439 ------------------------------MDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY +N +A+ LF ++ E P+ T++ +L +SL++ D G++IH +R+
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S V+N+L+ MY+K G + A +F+ I ++ VSWT MI HG G+EAI L
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M + GI+ D I++V +L AC+H GLV++G R++N+M++ KI+PT H+A +VD+L
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L +AY FIENMP+ PD WG+LL CR+H ++ L + AEK+ +EP+N+G Y
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 707
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
+ N+Y+ KWE +RK + G++K G SW++I+ +V++F D +P+ + I
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 767
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ K+ + E G+ P T L D EE KE+ L HSEKLA+A G+IS+ +R+ KN
Sbjct: 768 LRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 827
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH KF+ KL REIV+RD+ RFH FK G CSCR +W
Sbjct: 828 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 226/486 (46%), Gaps = 72/486 (14%)
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+R T + + E G +NA+++ + + P T+ SVL C L GK+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
V +F+ G N+ + L MY GD A VFD ++++ WN++++ SG
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG- 174
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE-ALGMFANMLKDSSLKPDKFTLASTL 285
DF ++G+F M+ S ++ D +T +
Sbjct: 175 -------------------------------DFSGSIGLFKKMMS-SGVEMDSYTFSCVS 202
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
+ ++L + G+Q+H +I+++ F VGN+L++ Y K V+ A+K+ ++ ++ +
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--MTERD 260
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
VI++ ++++GY+ NGL + + +F M+
Sbjct: 261 VISWNSIINGYV-------------------------------SNGLAEKGLSVFVQMLV 289
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G + + T+ ++ + + + G+ +H+ +++ + N L+ MYSK G++++
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A+ VF + R VS+TSMI A+ GL EA++LFE M E GI PD T VL C
Sbjct: 350 AKAVFREMSDRS-VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
L+++G+R + +K + + +++D+ + G +QEA M ++ D+++W
Sbjct: 409 RYRLLDEGKRVHEWIKE-NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISW 466
Query: 586 GSLLSA 591
+++
Sbjct: 467 NTIIGG 472
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/754 (35%), Positives = 401/754 (53%), Gaps = 95/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H+ + + L VF+ +L+N Y K S++ A+KV
Sbjct: 29 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKV--------------------- 67
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
F+ MP R +W ++I Y+ R A +F M + + T S+
Sbjct: 68 ----------FDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSI 117
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C +L GK V + +T + V +L+ MYA+ A VF M+ KN+
Sbjct: 118 LDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNL 177
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+W+ + I ++ +G+ EAL F M++
Sbjct: 178 ITWSAI-------------------------------ITAFADHGHCGEALRYF-RMMQQ 205
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ P++ T S L+ L+ +IH I D T + NAL++ Y
Sbjct: 206 EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVY-------- 257
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
G + G++ A I + ++ + AW ++ GY +G
Sbjct: 258 -----------------------GRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHG 294
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+++A+E ++ + E + T ++L+ +S SL GK IH++A+ G S + V N
Sbjct: 295 RSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKN 354
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL MYSK G++ ARR+F+ + R VSW M+ A AQHG EE ++L +M + G+K
Sbjct: 355 ALTNMYSKCGSMENARRIFDSMPIRS-AVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVK 413
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
+ IT+V VL++C+H GL+ +G +Y++ + + I+ H+ +VDLLGRAG LQEA
Sbjct: 414 LNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEK 473
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+I MP EP++V W SLL ACRVHK+LD GK+AA KLL ++P NS A L N+YS G
Sbjct: 474 YISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGD 533
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W++AA +R++M VKK G S +Q++NKVH F V D HP+ IY+K+ ++ ++E
Sbjct: 534 WKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMRE 593
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+VPDT VLHDV+E+ KE +L +HSEKLAIAFGLISTPE ++L I KNLRVC DCH+A
Sbjct: 594 AGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTA 653
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KFI K+ REIVVRD RFHHF+ G CSC+DYW
Sbjct: 654 TKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 200/496 (40%), Gaps = 99/496 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L + + N GK V I + L +F+ +L+ YA+ S A +VF M
Sbjct: 114 FLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMK 173
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K L +W+ I++A+A G A+R F
Sbjct: 174 QKNLITWSAIITAFADHGHCG-------------------------------EALRYFRM 202
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK--V 193
M Q+ +LP + T S+L T L ++H + + GL ++N+L+N+Y +
Sbjct: 203 MQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCET 262
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G+ +A+ + M + +++WNV +I GY+
Sbjct: 263 GELDVAEVILQEMDEQQITAWNV-------------------------------LINGYT 291
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+G EAL + L+ ++ DK T S L+AC + L GK IH+ + D+
Sbjct: 292 LHGRSREALETYQR-LQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 350
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V NAL + Y+K G +E ARRIFDS+
Sbjct: 351 IVKNALTNMYSKCGSME---------------------------------NARRIFDSMP 377
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
R V+W ML Y Q+G +++ ++L R M +EG K N T ++LS S + G Q
Sbjct: 378 IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ 437
Query: 434 -IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
H+ G L+ + +AG + A + + + E V+W S++ A H
Sbjct: 438 YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVH 497
Query: 493 GLGEEAIQLFERMLEL 508
+ ++LEL
Sbjct: 498 KDLDRGKLAARKLLEL 513
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 283/822 (34%), Positives = 435/822 (52%), Gaps = 133/822 (16%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ +H +KCG V + +L++ Y K + + VF+ MP + + +W ++L+ Y
Sbjct: 118 GEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYV 177
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
QGR AC + + +F M + V P FT TS
Sbjct: 178 -QGR---ACS---------------------------DVMALFFRMRAEGVWPNPFTFTS 206
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++ + G + G++VH+ VK G V V NSL+NMY+K G AKAVF M ++
Sbjct: 207 VLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRD 266
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+V+WN+++AG N + EAL +F + +
Sbjct: 267 -------------------------------MVSWNTLMAGLLLNEHQLEALQLFHDS-R 294
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S K + T ++ + CANL++L L +Q+H+ +++ F + G V A++ Y+K G ++
Sbjct: 295 ASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELD 354
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV------------- 377
A I S NV+++T ++ G I+ DI A +F +R+ +V
Sbjct: 355 DAFNIFLLMPGSQ-NVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA 413
Query: 378 ----------------------VAWTAMLVGYEQNGLNKDAVELFR-------------- 401
TA+L Y + G ++A+ +F+
Sbjct: 414 SIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAML 473
Query: 402 -----------------SMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRSGE 443
M +G KPN +T+S+ + + +S A +D G+Q HA +++
Sbjct: 474 SCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRY 533
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
++ V +AL+TMY++ G+I++AR VF ++ VSW SMI AQHG +EA+ F
Sbjct: 534 QDAICVGSALVTMYARKGSIDSARIVFER-QTDRDLVSWNSMISGYAQHGYSKEALDTFR 592
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M +GI+ D T++ V+ CTH GLV++GQ+Y++ M H I PT H++ MVDL RA
Sbjct: 593 QMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRA 652
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L E N IE MP + W +LL ACRVHKN++LGK+AA+KLLL+EPD+S Y L
Sbjct: 653 GKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLS 712
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y++ G+W++ +RK M VKK G SW+QI+NKVH F D HP + IY K+
Sbjct: 713 NIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLK 772
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ +K+ G+ P+T+ VLHD+ E+ KE ML HSE+LA+AFGLI+TP T L+I+KNLR
Sbjct: 773 AMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLR 832
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCH +K + + DREI++RD +RFHHF G CSC D+W
Sbjct: 833 VCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 231/521 (44%), Gaps = 88/521 (16%)
Query: 86 LSAYAKQGRLDLAC----------EVFNLMPNRDSVSWTT----IIVTYNEIGRFKN-AI 130
LSA A RL+ C + + MP+RD+ + ++ IV Y G+ + A+
Sbjct: 26 LSALASAARLEDDCADTCNAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEAL 85
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNM 189
FV+ V V+ VL C + D +G+++H VK G V V +L++M
Sbjct: 86 DHFVD-VHRCGRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDM 144
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K G V DG R F+ M +R+VVTW S++
Sbjct: 145 YMKCG------GVEDG-------------------------RVVFEGMPKRNVVTWTSLL 173
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GY Q + + +F M + + P+ FT S LSA A+ + LG+++HA ++
Sbjct: 174 TGYVQGRACSDVMALFFRM-RAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGC 232
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+T V N+LI+ Y+K G VE A+ +F
Sbjct: 233 RSTVFVCNSLINMYSKCGLVE---------------------------------EAKAVF 259
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ RD+V+W ++ G N +A++LF K + T S ++ + ++L L
Sbjct: 260 RQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLA 319
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
+Q+H+ L+ G S +V A++ YSK G ++ A +F L+ Q VSWT+MI
Sbjct: 320 LARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGC 379
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
Q+ A LF RM E +KP+ TY VLTA + Q + ++K + +
Sbjct: 380 IQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIP---ILLPQIHAQIIKTNY--QHA 434
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
PS +++ + G +EA + I M DVVAW ++LS
Sbjct: 435 PSVGTALLASYSKLGNTEEALS-IFKMIDHKDVVAWSAMLS 474
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 172/377 (45%), Gaps = 41/377 (10%)
Query: 230 ARAQFDQMIERDVVTWNS----MIAGYSQNGYDF-EALGMFANMLKDSSLKPDKFTLAST 284
AR D M RD +S I Y + G EAL F ++ + ++ ++
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQ--GAAVSRV 105
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C + G+Q+H ++ FD A+VG
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFD------------RAEVG----------------- 136
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
T L+D Y+K G + R +F+ + R+VV WT++L GY Q D + LF M
Sbjct: 137 ---VGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMR 193
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
EG PN +T +++LS +S ++D G+++HA +++ G S++ V N+LI MYSK G +
Sbjct: 194 AEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVE 253
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
A+ VF + R + VSW +++ L + EA+QLF K TY V+ C
Sbjct: 254 EAKAVFRQMETR-DMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLC 312
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+ + ++ ++ + H + +++D + G L +A+N MP +VV+
Sbjct: 313 ANLKQLALARQLHSCVLK-HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVS 371
Query: 585 WGSLLSACRVHKNLDLG 601
W +++ C + ++ L
Sbjct: 372 WTAMIGGCIQNADIPLA 388
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 41/273 (15%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF Y+ +L +++ P + +HA+IIK + + +L+ Y+K + A
Sbjct: 400 VKPNEFTYSTVLTASI----PILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEAL 455
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+F + K + +W+ +LS Y++ G D
Sbjct: 456 SIFKMIDHKDVVAWSAMLSCYSQAGDCD-------------------------------G 484
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTA-LGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A +F++M + P +FT++S + +C + + G++ H+ +K + V ++L+
Sbjct: 485 ATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALV 544
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVV 243
MYA+ G A+ VF+ +++ SWN ++S + G A F QM IE D
Sbjct: 545 TMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGA 604
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
T+ ++I G + G E F +M+ D ++ P
Sbjct: 605 TFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISP 637
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/707 (36%), Positives = 400/707 (56%), Gaps = 7/707 (0%)
Query: 83 NTILSAYAKQGRLDL--ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
N++ S + L L A +F+ MP + T + + I ++ M
Sbjct: 39 NSLTSCISPSDPLHLRYALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVD 98
Query: 141 VLPTQFTVTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVN-VTNSLLNMYAKVGDEMM 198
V P FT + C G + G+ +H+ +T L V + + +++MYA++G
Sbjct: 99 VPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGD 158
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ FD +K+V +W V+S G LD AR + R+VVTW +I+GYS+ G
Sbjct: 159 ARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRA 218
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
EA+ F +ML D + PD+ T+ LSAC L+ L G +H + + + A
Sbjct: 219 AEAVDCFNSMLSDG-IAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVA 277
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI YAK G A+++ + G + ++DGY K+G + AR +FD + D DV+
Sbjct: 278 LIDMYAKCGDTGRAREVFDALGRGR-GPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVI 336
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+ +++ GY G ++A+ LF M R G +N+T+ +L+ S+SL +L G+ +HA
Sbjct: 337 TFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACI 396
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+ + + AL+ MY K G + A F + R + +W++MI LA +G+G+ A
Sbjct: 397 EQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMIGGLAFNGMGKAA 455
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
++ F M G + +TY+ VLTAC+H L+++G+ Y++ M+ +H I+P H+ M+D
Sbjct: 456 LEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMID 515
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LLGR+GLL EA + ++ MP++P+ V W S+LSACRVHKN+DL + AA LL +EP
Sbjct: 516 LLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAV 575
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y + N+Y +WEDA+ IR+ M+ GVKKT G+S + + +VH F V D HPQ I
Sbjct: 576 YVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEI 635
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
M +I +K G+ P T+ + DV+E+ KEQ L HSEKLAIAFGL+S N + I
Sbjct: 636 VVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHI 695
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLRVC DCHSAIK I +L +REI+VRD +RFHHF+ G+CSC D+W
Sbjct: 696 IKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 248/522 (47%), Gaps = 73/522 (13%)
Query: 30 FVGKLVHARIIKCGLHLSV-FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
+G+++HA + L +V + + +++ YA+ A++ FDE VK + +W T++S
Sbjct: 121 LLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISG 180
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
AK G LD A + P R+ V+WT +I Y+ GR A+ F M+ D + P + TV
Sbjct: 181 LAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTV 240
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-R 207
+L++C L DL+ G +H V + + +L++MYAK GD A+ VFD + R
Sbjct: 241 IGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGR 300
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ WN ++ + G +D+AR+ FDQM + DV+T+NS+I GY G EAL +F
Sbjct: 301 GRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTK 360
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + L D FT+ L+A A+L L G+ +HA
Sbjct: 361 M-RRHGLGADNFTMVGLLTASASLGALPQGRALHAC------------------------ 395
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
I Q++VE+ +V T LLD Y+K G + A F + RDV W+AM+ G
Sbjct: 396 ---IEQRLVER------DVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGL 446
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
NG+ K A+E F M +G N+ T A+L+ S LD G+
Sbjct: 447 AFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGR--------------- 491
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+Y + R + N+ R + + MI L + GL +EA+ L + M
Sbjct: 492 --------LY-----FDEMRLLHNI---RPQIEHYGCMIDLLGRSGLLDEAMDLVQTM-- 533
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
++P+ + + +L+AC V+ Q N ++ K++P
Sbjct: 534 -PMQPNAVIWASILSACRVHKNVDLAQ---NAAHHLLKLEPA 571
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/709 (37%), Positives = 394/709 (55%), Gaps = 69/709 (9%)
Query: 80 CSWNTILSAYAKQGRLDLACEVFNLMPNR--DSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
C + + +A A L A +F L P + + ++ G ++A+ +FVEM+
Sbjct: 51 CFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEML 110
Query: 138 Q-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
V P Q TV L SC+ + L G+ + ++ VK GL V +SL++MYA D
Sbjct: 111 DVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDV 170
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A+ +F D + E VV WN++I Y +NG
Sbjct: 171 AAAQLLF-------------------------------DAVEENGVVMWNAIITAYMKNG 199
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
E + MF ML + + D+ TL S ++AC + KLGK + Y+ D G V
Sbjct: 200 NWMEVVEMFKGML-EVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYV-----DEKGLVR 253
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N + T L+D Y K G++G ARR+FD ++ RD
Sbjct: 254 NRNL----------------------------MTALIDMYAKCGELGKARRLFDGMQSRD 285
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VVAW+AM+ GY Q ++A+ LF M +PN+ T+ ++LS + L +L+ GK +H+
Sbjct: 286 VVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHS 345
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
R + ++ + AL+ Y+K G I+ A F + + + +WT++I +A +G G
Sbjct: 346 YIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKN-SWTWTALIKGMATNGRGR 404
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA++LF M + I+P +T++GVL AC+H LVE+G+R+++ M + IKP H+ +
Sbjct: 405 EALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCV 464
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLLGRAGL+ EAY FI MP+EP+ V W +LLS+C VHKN+++G+ A ++++ + P +S
Sbjct: 465 VDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHS 524
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y+S G+W++AA IRK MK G++KT G S +++ V F ED HPQ
Sbjct: 525 GDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLK 584
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
IY K+ ++ D IK G++P+TA V +V+E KE + HHSEKLAIAFGL+ T+
Sbjct: 585 EIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATI 644
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+ KNLRVC DCHSA K I K+ +REIVVRD RFHHFK G CSC DYW
Sbjct: 645 RLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 211/474 (44%), Gaps = 100/474 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ + A +K GL F+ +SL++ YA ++ A+ +FD + + WN I++AY
Sbjct: 137 VGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYM 196
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G +W + + MF M++ V + T+ S
Sbjct: 197 KNG------------------NWMEV-------------VEMFKGMLEVGVAFDEITLVS 225
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ +C +GD GK V +V + GL N+ +L++MYAK G+ A+ +FDGM+ ++
Sbjct: 226 VVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRD 285
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +W ++MI+GY+Q EAL +F+ M +
Sbjct: 286 VVAW-------------------------------SAMISGYTQADQCREALALFSEM-Q 313
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ ++P+ T+ S LSACA L L+ GK +H+YI R T +G AL+ YAK G ++
Sbjct: 314 LAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCID 373
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A VE F+S+ ++ WTA++ G N
Sbjct: 374 DA---VEA------------------------------FESMPVKNSWTWTALIKGMATN 400
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
G ++A+ELF SM + +P + T +L S ++ G++ S + G
Sbjct: 401 GRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEH 460
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
++ + +AG I+ A + + V W +++ + A H +GEEA++
Sbjct: 461 YGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALK 514
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/598 (39%), Positives = 370/598 (61%), Gaps = 37/598 (6%)
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY K+G+ A A F+ M ++N+ S N++++ H+ G LD A FD+M+ER+V TWN+M
Sbjct: 1 MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
++G Q ++ L +F M + PD+FTL S L CA L GKQ+HAY+++
Sbjct: 61 VSGLIQFEFNENGLFLFREM-HELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYG 119
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
++ VG++L Y K G + +K+++
Sbjct: 120 YEFNLVVGSSLAHMYMKSGSLGEGEKVIK------------------------------- 148
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
++R R+VVAW ++ G QNG + ++L+ M G +P+ TL +++S S+ LA+L
Sbjct: 149 --AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNI-NAARRVFNLIHWRQETVSWTSMIV 487
G+QIHA A+++G S+++V ++LI+MYSK G + ++ + + + H ++V W+SMI
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEH--PDSVLWSSMIA 264
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A HG GEEA+ LFE+M + G+ + +T++ +L AC+H GL E+G ++ +M + +K
Sbjct: 265 AYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLK 324
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ +VDLLGR+G L EA I +MPLE DVV W +LLSACR+H+N D+ AE+
Sbjct: 325 PRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEE 384
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
+L + P +S Y L N+++S +W+D + +R +M+ VKK G SW++++N+V F +
Sbjct: 385 ILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSM 444
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HP + I + ++ +E+K G+VPDTA+V HD + + KE L +HSEKLAIAFGL
Sbjct: 445 GDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGL 504
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++ P + +R+MKNLR+C+DCH AIK I + +REI+VRD +RFHHFK G CSC DYW
Sbjct: 505 MNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 209/462 (45%), Gaps = 67/462 (14%)
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
Y K I A F+ MP++ + S N +++ + + G LD A +VF+ M R+ +W ++
Sbjct: 2 YFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMV 61
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ +N + +F EM + LP +FT+ SVL C L AGK+VH++V+K G
Sbjct: 62 SGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYE 121
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+ V +SL +MY K G + V MR++NV +W
Sbjct: 122 FNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAW----------------------- 158
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
N++IAG +QNG+ FE + NM+K S L+PDK TL S +S+ A L L G
Sbjct: 159 --------NTLIAGNAQNGH-FEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQG 209
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
+QIHA I+ ++ V ++LIS Y+K G +E + K LLD
Sbjct: 210 QQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMK----------------ALLD--- 250
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
D V W++M+ Y +G ++AV LF M +EG N+ T +
Sbjct: 251 --------------CEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLS 296
Query: 418 MLSVSSSLASLDHGKQIHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L S + G + + G L ++ + ++G ++ A + +
Sbjct: 297 LLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLE 356
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ V W +++ A H + A + E +L L + D TYV
Sbjct: 357 ADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQ-DSATYV 397
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P EF +L+ R + GK VHA ++K G ++ + +SL + Y K+ S+ +KV
Sbjct: 87 PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
M ++ + +WNT+++ A+ G + +++N+M
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMK------------------------ 182
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+ P + T+ SV++S L L G+++H+ +K G + V V +SL++MY
Sbjct: 183 -------MSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMY 235
Query: 191 AKVG---DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----V 243
+K G D M KA+ D +V W+ +++ + GR + A F+QM + + V
Sbjct: 236 SKCGCLEDSM--KALLDCEHPDSV-LWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDV 292
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
T+ S++ S NG + +G F M++ LKP
Sbjct: 293 TFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKP 325
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +HA IK G + +V + +SL++ Y+K + + K + W+++++AY
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAY 266
Query: 90 AKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
GR + A +F M + V++ +++ + G + + F MV+ +
Sbjct: 267 GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVE------K 320
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
+ + L T + DL G SGC++ +++ D ++ K +
Sbjct: 321 YGLKPRLEHYTCVVDL------------LGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368
Query: 206 MRL 208
R+
Sbjct: 369 CRI 371
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 257/706 (36%), Positives = 418/706 (59%), Gaps = 69/706 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K +D AC VF LMP++D+VSW ++I + RF+ A+ F M ++ ++
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 554
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P+ F+V S L+SC++LG L+ G+++H K GL V+V+N+LL +YA+
Sbjct: 555 PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAE---------- 604
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEA 261
+ ++ + F QM E D V+WNS I ++ +A
Sbjct: 605 ---------------------TDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQA 643
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L F M++ + +P++ T + L+A ++ L LG QIHA I++ + NAL++
Sbjct: 644 LKYFLEMMQ-AGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLA 702
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K +E + I F+ + + RD V+W
Sbjct: 703 FYGKCEQMEDCE-------------IIFSRMSE-------------------RRDEVSWN 730
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+M+ GY +G+ A++L M++ G K + +T + +LS +S+A+L+ G ++HA A+R+
Sbjct: 731 SMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRA 790
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S + V +AL+ MY+K G I+ A R F L+ R SW SMI A+HG G++A+++
Sbjct: 791 CLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRN-IYSWNSMISGYARHGHGQKALKI 849
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F RM + G PDH+T+VGVL+AC+H GLV++G +++ M V+ + P HF+ MVDLLG
Sbjct: 850 FTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLG 909
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CRVH-KNLDLGKIAAEKLLLIEPDNSGAY 619
RAG +++ +FI+ MP++P+++ W ++L A CR + +N +LG+ AA+ L+ +EP N+ Y
Sbjct: 910 RAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNY 969
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N++++ G WED R +M+ VKK G SWV +++ VH+F D HP+++ IY
Sbjct: 970 VLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIY 1029
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
K+ ++ ++I++ G+VP+T L+D+E + KE++L +HSEKLAIAF L E +RIM
Sbjct: 1030 EKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRKSE-LPIRIM 1088
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH+A K+I K+V R+I++RD+ RFHHF G+CSC DYW
Sbjct: 1089 KNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 143/605 (23%), Positives = 268/605 (44%), Gaps = 122/605 (20%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y + G L A ++F+ MP ++ VSW+ +I Y + A +F ++ +L
Sbjct: 179 NTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLL 238
Query: 143 PTQFTVTSVLASCTALGD--LSAGKKVHSFVVK-----------------TGLSGCVN-- 181
P F V S L +C G + G ++H+F+ K + SG ++
Sbjct: 239 PNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDA 298
Query: 182 ------------VT-NSLLNMYAKVGDEMMAKAVFDGMR--------------------- 207
VT NS++++Y + GD + A +F M+
Sbjct: 299 HRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTA 358
Query: 208 ------------------------LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
L+++ + +V+ G +D A+ F QM +R+ V
Sbjct: 359 ACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAV 418
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT-LASTLSACANL-EKLKLGKQIH 301
T N ++ G ++ EA +F M + + L ST + +NL E + G+++H
Sbjct: 419 TMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVH 478
Query: 302 AYIIRTEF-DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
AY+ R+ DA +GNAL++ Y K ++
Sbjct: 479 AYLFRSGLVDARISIGNALVNMYGKCTAID------------------------------ 508
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
A +F + +D V+W +M+ G + N ++AV F +M R G P+N+++ + LS
Sbjct: 509 ---NACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLS 565
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
SSL L G+QIH + G +SVSNAL+T+Y++ +IN ++VF + + V
Sbjct: 566 SCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQV 624
Query: 481 SWTSMIVALAQHGLGE-EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
SW S I ALA++ +A++ F M++ G +P+ +T++ +L A + ++ G + + +
Sbjct: 625 SWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHAL 684
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR----VH 595
+ + + + +++ G+ +++ M D V+W S++S +H
Sbjct: 685 ILK-YSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILH 743
Query: 596 KNLDL 600
K +DL
Sbjct: 744 KAMDL 748
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 255/568 (44%), Gaps = 108/568 (19%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H ++ K G VF N+L+N Y + ++ A+K+FDEMP K L SW+ ++S Y +
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ--- 218
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
N MP+ A +F ++ +LP F V S L +
Sbjct: 219 --------NRMPDE--------------------ACSLFKGVISSGLLPNHFAVGSALRA 250
Query: 155 CTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM-MAKAVFDGMRLKNV 211
C G + G ++H+F+ K + ++N L++MY+ + A VFD ++ +N
Sbjct: 251 CQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNS 310
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+WN ++S++ G D V+ + + G +
Sbjct: 311 VTWNSIISVYCRRG---------------DAVSAFKLFSVMQMEGVEL------------ 343
Query: 272 SSLKPDKFTLASTLSACANLEK--LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+L+P+++TL S ++A +L L L +Q+ I ++ F VG+AL++ +A+ G
Sbjct: 344 -NLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG-- 400
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
L+D A+ IF + DR+ V ++VG +
Sbjct: 401 ----------------------LMD---------CAKMIFKQMYDRNAVTMNGLMVGLAR 429
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK----QIHASALRSGEAS 445
++A ++F+ M ++ + N+ +L +LS + ++L GK ++HA RSG
Sbjct: 430 QHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVD 488
Query: 446 S-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ +S+ NAL+ MY K I+ A VF L+ ++TVSW SMI L + EEA+ F
Sbjct: 489 ARISIGNALVNMYGKCTAIDNACSVFQLMP-SKDTVSWNSMISGLDHNERFEEAVSCFHT 547
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRA 563
M G+ P + + + L++C+ G + G++ + K + + S+ +++ L
Sbjct: 548 MKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSN--ALLTLYAET 605
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ E MP E D V+W S + A
Sbjct: 606 DSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 213/492 (43%), Gaps = 100/492 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H K GL L V + N+L+ YA+T+SI+ +KVF +MP SWN+ + A A
Sbjct: 575 LGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALA 634
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K L A++ F+EM+Q P + T +
Sbjct: 635 KYEASVL------------------------------QALKYFLEMMQAGWRPNRVTFIN 664
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RLK 209
+LA+ ++ L G ++H+ ++K ++ + N+LL Y K + +F M +
Sbjct: 665 ILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERR 724
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+ SWN ++S ++HSG L A D+V W M G
Sbjct: 725 DEVSWNSMISGYLHSGILHKA---------MDLV-WPMMQRGQ----------------- 757
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K D FT A+ LSACA++ L+ G ++HA +R ++ VG+AL+ YAK G +
Sbjct: 758 -----KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKI 812
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ A + E + P R I+ +W +M+ GY +
Sbjct: 813 DYASRFFE------------------------LMPVRNIY---------SWNSMISGYAR 839
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLS 448
+G + A+++F M + G P++ T +LS S + +D G K + G + +
Sbjct: 840 HGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIE 899
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ-HGLGEEAIQLFERMLE 507
+ ++ + +AG++ + + W +++ A + +G E Q +ML
Sbjct: 900 HFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKML- 958
Query: 508 LGIKPDH-ITYV 518
+ ++P + + YV
Sbjct: 959 IELEPQNAVNYV 970
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 144/280 (51%), Gaps = 17/280 (6%)
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+V TL++ Y++IG++ AR++FD + +++V+W+ ++ GY QN + +A LF+ ++
Sbjct: 174 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVI 233
Query: 405 REGPKPNNYTLSAMLSVSSSLAS--LDHGKQIHASALRSGEASSLSVSNALITMYSK-AG 461
G PN++ + + L S + G QIHA + S + +SN L++MYS +G
Sbjct: 234 SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSG 293
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM----LELGIKPDHITY 517
+I+ A RVF+ I +R +V+W S+I + G A +LF M +EL ++P+ T
Sbjct: 294 SIDDAHRVFDEIKFRN-SVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTL 352
Query: 518 VGVLT-ACTHG--GLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNF 572
++T AC+ GLV Q M+ + K + +++V+ R GL+ A
Sbjct: 353 CSLVTAACSLADCGLVLLEQ----MLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMI 408
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+ M V G ++ R H+ + K+ E L+E
Sbjct: 409 FKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVE 448
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 77/299 (25%)
Query: 8 SLISPLEFYAHLLQSNLK-SRNPFV--------------GKLVHARIIKCGLHLSVFLKN 52
S++ L+++ ++Q+ + +R F+ G +HA I+K + ++N
Sbjct: 639 SVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIEN 698
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+L+ FY K E + + +F M + RD VS
Sbjct: 699 ALLAFYGKCEQMEDCEIIFSRMSER------------------------------RDEVS 728
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++I Y G A+ + M+Q FT +VL++C ++ L G +VH+ V
Sbjct: 729 WNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAV 788
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
+ L V V ++L++MYAK G A F+ M ++N+ SW
Sbjct: 789 RACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSW------------------ 830
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
NSMI+GY+++G+ +AL +F M K PD T LSAC+++
Sbjct: 831 -------------NSMISGYARHGHGQKALKIFTRM-KQHGQSPDHVTFVGVLSACSHV 875
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
SSSL +H +H ++G + N LI +Y + GN+ +AR++F+ + ++ VS
Sbjct: 153 SSSLYDANH---LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMP-QKNLVS 208
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
W+ +I Q+ + +EA LF+ ++ G+ P+H L AC G
Sbjct: 209 WSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/588 (39%), Positives = 360/588 (61%), Gaps = 48/588 (8%)
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+A+ +FD M +++ SWNV+++ ++ + L ARA F++M ERD+V+WN+M++GY+QNG+
Sbjct: 13 LARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGF 72
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EA +F M P K G N
Sbjct: 73 VDEAREIFYKM-------PLK---------------------------------NGISWN 92
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
L++ Y + G +E A+++ E S + + ++++ L+ G+++ R +FD++ RD
Sbjct: 93 GLLAAYVQNGRIEDAKRLFE-SKMDW-TLVSWNCLMGGFVR-----KRRNLFDNMPQRDS 145
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
++W+AM+ GY QNG +++A+ F M R+ + N + + LS S++A+L+ G+Q+H
Sbjct: 146 ISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCR 205
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+++G + V NAL+ MY K G+I+ AR F I ++ VSW +MI A+HG GEE
Sbjct: 206 LVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEI-LEKDVVSWNTMIHGYARHGFGEE 264
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A+ +FE M GI+PD T V VL AC+H GLV+QG Y+ M + I H+ MV
Sbjct: 265 ALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMV 324
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGRAG L+EA N ++NMP EPD WG+LL A R+H N +LG+ AA+ + +EP NSG
Sbjct: 325 DLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSG 384
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L LY++ G+W DA +R M+ GVKK G+SW+++QNK+H F V D HP D
Sbjct: 385 MYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDK 444
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY + ++ ++K+ G++ T V HDVEE+ K ML++HSEKLA+A+G++ P +R
Sbjct: 445 IYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIR 504
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++KNLRVC DCH+AIK+I K+V R I++RD RFH+F+ G CSCRD+W
Sbjct: 505 VIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 207/457 (45%), Gaps = 84/457 (18%)
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+++ Y + A+ +FD+MP + L SWN +L+ Y + L A +F MP RD VSW
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
++ Y + G A +F +M +K
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKM----------------------------------PLK 86
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
G+S N LL Y + G AK +F+ + SWN ++ G + R
Sbjct: 87 NGIS-----WNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLM-----GGFVRKRRNL 136
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD-SSLKPDKFTLASTLSACANLE 292
FD M +RD ++W++MIAGYSQNG EAL F M +D L FT A LS C+N+
Sbjct: 137 FDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCA--LSTCSNIA 194
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L+LG+Q+H +++ + VGNAL++ Y K G ++ A+ AF +
Sbjct: 195 ALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARD-------------AFQEI 241
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
L ++DVV+W M+ GY ++G ++A+ +F M G +P++
Sbjct: 242 L--------------------EKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDD 281
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFN 471
T+ ++L+ S +D G + S R G + L ++ + +AG + A+ +
Sbjct: 282 ATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMK 341
Query: 472 LIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
+ + + +W +++ A HG LGE+A Q+ M
Sbjct: 342 NMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEM 378
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 153/314 (48%), Gaps = 61/314 (19%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLA------------- 98
N++++ YA+ + A+++F +MP+K SWN +L+AY + GR++ A
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLV 120
Query: 99 ---C----------EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
C +F+ MP RDS+SW+ +I Y++ G + A+ FVEM +D +
Sbjct: 121 SWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNR 180
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
+ T L++C+ + L G+++H +VK G V N+LL MY K G A+ F
Sbjct: 181 SSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQE 240
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+ K+V SW N+MI GY+++G+ EAL +F
Sbjct: 241 ILEKDVVSW-------------------------------NTMIHGYARHGFGEEALTVF 269
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCY 323
++K + ++PD T+ S L+AC++ + G + + Y + ++ T + + ++
Sbjct: 270 -ELMKTTGIRPDDATMVSVLAACSHAGLVDQGSE-YFYSMNRDYGITAKLVHYTCMVDLL 327
Query: 324 AKVGGVEIAQKIVE 337
+ G +E AQ +++
Sbjct: 328 GRAGQLEEAQNLMK 341
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 152/307 (49%), Gaps = 22/307 (7%)
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
+IS Y + ++A+ + ++ + ++ ++ +L GY++ D+ AR +F+ + +RD+V
Sbjct: 1 MISGYLRNHKFDLARDLFDK--MPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIV 58
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W AML GY QNG +A E+F M P N + + +L+ ++ K++ S
Sbjct: 59 SWNAMLSGYAQNGFVDEAREIFYKM----PLKNGISWNGLLAAYVQNGRIEDAKRLFESK 114
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+ +L N L+ G + R +F+ + R +++SW++MI +Q+G EEA
Sbjct: 115 M----DWTLVSWNCLM-----GGFVRKRRNLFDNMPQR-DSISWSAMIAGYSQNGCSEEA 164
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMV 557
+ F M + + ++ L+ C++ +E G++ + ++K ++ + +++
Sbjct: 165 LHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGN--ALL 222
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE--KLLLIEPDN 615
+ + G + EA + + + LE DVV+W +++ H + E K I PD+
Sbjct: 223 AMYCKCGSIDEARDAFQEI-LEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDD 281
Query: 616 SGAYSAL 622
+ S L
Sbjct: 282 ATMVSVL 288
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H R++K G ++ N+L+ Y K SI A+ F E+ K + SWNT++ YA
Sbjct: 198 LGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYA 257
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ G + A VF LM D + +++ + G F M +D +
Sbjct: 258 RHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRD------Y 311
Query: 147 TVTSVLASCTALGDL 161
+T+ L T + DL
Sbjct: 312 GITAKLVHYTCMVDL 326
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/627 (38%), Positives = 373/627 (59%), Gaps = 67/627 (10%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L CT L G+ VH+ ++++ + + N+LLNMYAK G
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS------------- 110
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
L+ AR F++M +RD VTW ++I+GYSQ+ +AL F M
Sbjct: 111 ------------------LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L+ P++FTL+S + A A + G Q+H + ++ FD+ VG+AL
Sbjct: 153 LR-FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL--------- 202
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
LD Y + G + A+ +FD+L R+ V+W A++ G+
Sbjct: 203 ------------------------LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+ + A+ELF+ M+R+G +P++++ +++ SS L+ GK +HA ++SGE
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
N L+ MY+K+G+I+ AR++F+ + +++ VSW S++ A AQHG G+EA+ FE M +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
GI+P+ I+++ VLTAC+H GL+++G YY +MK I P H+ ++VDLLGRAG L
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FIE MP+EP W +LL+ACR+HKN +LG AAE + ++PD+ G + L N+Y+S
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W DAA +RK MK GVKK SWV+I+N +H+F D HPQR+ I K ++ +
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 536
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IKE+G+VPDT+ V+ V++ +E L++HSEK+A+AF L++TP +T+ I KN+RVC DC
Sbjct: 537 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 596
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFK 775
H+AIK K+V REI+VRD RFHHFK
Sbjct: 597 HTAIKLASKVVGREIIVRDTNRFHHFK 623
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 196/431 (45%), Gaps = 67/431 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+L+ YAK G L+ A +VF MP RD V+WTT+I Y++ R +A+ F +M++
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT++SV+ + A G ++H F VK G V+V ++LL++Y + G A+ V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + +N SW N++IAG+++ +AL
Sbjct: 219 FDALESRNDVSW-------------------------------NALIAGHARRSGTEKAL 247
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ML+D +P F+ AS AC++ L+ GK +HAY+I++ GN L+
Sbjct: 248 ELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+KI FD L RDVV+W +
Sbjct: 307 YAKSGSIHDARKI---------------------------------FDRLAKRDVVSWNS 333
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+L Y Q+G K+AV F M R G +PN + ++L+ S LD G + + G
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ + +AG++N A R + W +++ A H E
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 503 ERMLELGIKPD 513
E + EL PD
Sbjct: 454 EHVFEL--DPD 462
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 171/331 (51%), Gaps = 38/331 (11%)
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+N L+ S + D+ + L C + L G+ +HA+I+++ F +GN L++ YAK
Sbjct: 48 SNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK 107
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A+K+ E+ + RD V WT ++
Sbjct: 108 CGSLEEARKVFEK---------------------------------MPQRDFVTWTTLIS 134
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY Q+ DA+ F M+R G PN +TLS+++ +++ G Q+H ++ G S
Sbjct: 135 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
++ V +AL+ +Y++ G ++ A+ VF+ + R + VSW ++I A+ E+A++LF+ M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAGHARRSGTEKALELFQGM 253
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAG 564
L G +P H +Y + AC+ G +EQG+ + M+K+ K+ + +++D+ ++G
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSG 311
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ +A + + + DVV+W SLL+A H
Sbjct: 312 SIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 64/281 (22%)
Query: 11 SPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
SP EF + ++++ R G +H +KCG +V + ++L++ Y + + A+
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFD + + SWN +++ +A++ + A E+F
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQ-------------------------- 251
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
M++D P+ F+ S+ +C++ G L GK VH++++K+G N+LL+M
Sbjct: 252 -----GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YAK G A+ +FD + ++V SW NS++
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSW-------------------------------NSLL 335
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
Y+Q+G+ EA+ F M + ++P++ + S L+AC++
Sbjct: 336 TAYAQHGFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSH 375
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +IK G L F N+L++ YAK+ SI A+K+FD + + + SWN++L+AYA+
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
G A F M PN +S+ +++ + G + M +D ++P
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPN--EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+ +V+ GDL+ + F+ + + + +LLN
Sbjct: 399 WHYVTVVDLLGRAGDLNRALR---FIEEMPIEPTAAIWKALLN 438
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/755 (34%), Positives = 403/755 (53%), Gaps = 96/755 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG + ++ G HL +++ +S++NF K ++ A+KVFD
Sbjct: 163 VGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDG----------------- 205
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
MP +D V W +II Y + G F +I+MF+EM+ + P+ T+ +
Sbjct: 206 --------------MPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMAN 251
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C G G HS+V+ G+ V V SL++MY+ +GD A VFD
Sbjct: 252 LLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFD------ 305
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
M R +++WN+MI+GY QNG E+ +F +++
Sbjct: 306 -------------------------SMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQ 340
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S D TL S + C+ L+ G+ +H+ IIR E ++
Sbjct: 341 SGS-GFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELES------------------- 380
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+++ T ++D Y K G I A +F + ++V+ WTAMLVG QN
Sbjct: 381 --------------HLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQN 426
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G +DA++LF M E N+ TL +++ + L SL G+ +HA +R G A ++
Sbjct: 427 GYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT 486
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ALI MY+K G I++A ++FN ++ + SMI+ HG G A+ ++ RM+E +
Sbjct: 487 SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERL 546
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ T+V +LTAC+H GLVE+G+ ++ M+ H ++P H+A +VDL RAG L+EA
Sbjct: 547 KPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEAD 606
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
++ MP +P +LLS CR HKN ++G A++L+ ++ NSG Y L N+Y+
Sbjct: 607 ELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEAR 666
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KWE IR M+ G+KK G+S +++ NKV+ F D HP IY + + E++
Sbjct: 667 KWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVE 726
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
G++PDT+ VL DV E +K ++L HSE+LAIAFGL+STP + ++I KNLRVC DCH+
Sbjct: 727 AEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHN 786
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+I K+V REI+VRDA RFHHF G CSC D+W
Sbjct: 787 VTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 213/506 (42%), Gaps = 103/506 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+P ++ A+LL++ +S VG H+ ++ G+ VF+ SL++ Y+
Sbjct: 244 PSPVTM-------ANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGD 296
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
A VFD M ++L SWN ++S Y + G ++P
Sbjct: 297 TGSAALVFDSMCSRSLISWNAMISGYVQNG----------MIP----------------- 329
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
+ +F +VQ T+ S++ C+ DL G+ +HS +++ L + ++
Sbjct: 330 ----ESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLS 385
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
++++MY+K G A VF M KN V+
Sbjct: 386 TAIVDMYSKCGAIKQATIVFGRMGKKN-------------------------------VI 414
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TW +M+ G SQNGY +AL +F M ++ + + TL S + CA+L L G+ +HA+
Sbjct: 415 TWTAMLVGLSQNGYAEDALKLFCQM-QEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAH 473
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
IR + + +ALI YAK G + A+K+
Sbjct: 474 FIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFN-------------------------- 507
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+ +DV+ +M++GY +G + A+ ++ M+ E KPN T ++L+ S
Sbjct: 508 ------NEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACS 561
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSW 482
++ GK + S R + A L+ ++S+AG + A + + ++ T
Sbjct: 562 HSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVL 621
Query: 483 TSMIVALAQHGLGEEAIQLFERMLEL 508
+++ H IQ+ +R++ L
Sbjct: 622 EALLSGCRTHKNTNMGIQIADRLISL 647
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y +G +G AR +FD + AM+ G+ +N + + LFR M + N
Sbjct: 85 LIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEIN 144
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+YT L + L + G +I +A+R G L V ++++ K G + A++VF+
Sbjct: 145 SYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFD 204
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ ++ V W S+I Q GL E+IQ+F M+ G++P +T +L AC GL +
Sbjct: 205 GMP-EKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKK 263
Query: 532 QG 533
G
Sbjct: 264 VG 265
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/735 (35%), Positives = 401/735 (54%), Gaps = 117/735 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK GR+ A +F++ ++D VSW TII + ++ RF+ A+ M+Q V
Sbjct: 225 NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVR 284
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFV------VKTGLSGCVNVTNSLLNMYAKVGDE 196
P T+ SVL +C+ L L GK++H+FV ++ GC +L++MY
Sbjct: 285 PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGC-----ALVDMYCNCKQP 339
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
+ VFDGM R + WN+MIAGY +N
Sbjct: 340 EKGRLVFDGM-------------------------------FRRTIAVWNAMIAGYVRNE 368
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+D+EA+ +F M+ + L P+ TL+S L AC E + IH+ +++ F+ V
Sbjct: 369 FDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQ 428
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
NAL+ Y+++G +EIA+ I F S+ +D
Sbjct: 429 NALMDMYSRMGRIEIARSI---------------------------------FGSMNRKD 455
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGP------------------KPNNYTLSAM 418
+V+W M+ GY G + DA+ L M R KPN+ TL +
Sbjct: 456 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTV 515
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L ++LA+L GK+IHA A++ + ++V +AL+ MY+K G +N +R VF + R
Sbjct: 516 LPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRN- 574
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELG-----IKPDHITYVGVLTACTHGGLVEQG 533
++W +I+A HG GEEA++LF RM+E G I+P+ +TY+ + + +H G+V++G
Sbjct: 575 VITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEG 634
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE-PDVVAWGSLLSAC 592
+ MK H I+PT H+A +VDLLGR+G ++EAYN I+ MP V AW SLL AC
Sbjct: 635 LNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGAC 694
Query: 593 RVHKNLDLGKIAAEKLLLIEPD--NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
++H+NL++G+IAA+ L +++P+ + G ++ + + MK GV+K
Sbjct: 695 KIHQNLEIGEIAAKNLFVLDPNVLDYGTKQSM---------------LGRKMKEKGVRKE 739
Query: 651 QGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVK 710
G SW++ ++VH F D HPQ ++ + + +K+ G+VPDT+ VLH+V E+ K
Sbjct: 740 PGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEK 799
Query: 711 EQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATR 770
E ML HSE+LAIAFGL++T TT+R+ KNLRVCNDCH A KFI K+VDREI++RD R
Sbjct: 800 ETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRR 859
Query: 771 FHHFKKGLCSCRDYW 785
FHHF+ G CSC DYW
Sbjct: 860 FHHFRNGTCSCGDYW 874
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 216/484 (44%), Gaps = 102/484 (21%)
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
F AI + MV V P F +VL + + DL+ GK++H+ V K G + V NS
Sbjct: 66 FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+NMY K GD A+ VF D++ RD V+W
Sbjct: 126 LVNMYGKCGDIDAARRVF-------------------------------DEITNRDDVSW 154
Query: 246 NSMIAGYSQNGYDFE----ALGMFANMLKDSSLKPDKFTLASTLSACANL-EKLKLGKQI 300
NSMI + FE A+ +F ML + ++ P FTL S AC+NL L LGKQ+
Sbjct: 155 NSMINAACR----FEEWELAVHLFRLMLLE-NVGPTSFTLVSVAHACSNLINGLLLGKQV 209
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA+++R D NAL++ YAK+G V
Sbjct: 210 HAFVLRNG-DWRTFTNNALVTMYAKLGRVY------------------------------ 238
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
A+ +FD D+D+V+W ++ QN ++A+ M++ G +PN TL+++L
Sbjct: 239 ---EAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLP 295
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLS-VSNALITMYSKAGNINAARRVFNLIHWRQET 479
S L L GK+IHA L + + S V AL+ MY R VF+ + +R+
Sbjct: 296 ACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGM-FRRTI 354
Query: 480 VSWTSMIVALAQHGLGEEAIQLF-ERMLELGIKPDHITYVGVLTACT-----------HG 527
W +MI ++ EAI+LF E + ELG+ P+ +T VL AC H
Sbjct: 355 AVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHS 414
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
+V+ G ++N +++D+ R G ++ A + +M D+V+W +
Sbjct: 415 CVVKWGFEKDKYVQN------------ALMDMYSRMGRIEIARSIFGSMN-RKDIVSWNT 461
Query: 588 LLSA 591
+++
Sbjct: 462 MITG 465
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 130/251 (51%), Gaps = 22/251 (8%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H+ ++K G +++N+LM+ Y++ I A+ +F M K + SWNT+++ Y GR
Sbjct: 412 IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGR 471
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
D + NL+ + I T+++ KN + P T+ +VL
Sbjct: 472 HD---DALNLLHDMQRGQAEHRINTFDDYEDNKNF----------PLKPNSVTLMTVLPG 518
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C AL L GK++H++ VK LS V V ++L++MYAK G +++ VF+ M ++NV +W
Sbjct: 519 CAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITW 578
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIE-----RDV----VTWNSMIAGYSQNGYDFEALGMF 265
NV++ + G+ + A F +M+E R++ VT+ ++ A S +G E L +F
Sbjct: 579 NVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLF 638
Query: 266 ANMLKDSSLKP 276
M ++P
Sbjct: 639 YTMKAKHGIEP 649
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA +K L V + ++L++ YAK ++ ++ VF++M V+ + +WN ++ AY
Sbjct: 528 GKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGM 587
Query: 92 QGRLDLACEVFNLM-----PNRD----SVSWTTIIVTYNEIGRFKNAIRMFVEM 136
G+ + A ++F M NR+ V++ I + + G + +F M
Sbjct: 588 HGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTM 641
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/636 (38%), Positives = 373/636 (58%), Gaps = 67/636 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S++ +C L + +H+ + + +G V + NSL+++Y K G AV D
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCG------AVAD----- 117
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
AR FD M RD+ +W S+IAGY+QN EALG+ ML
Sbjct: 118 --------------------ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGML 157
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ KP+ FT AS L A +G+QIHA ++ ++ VG+AL
Sbjct: 158 R-GRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSAL---------- 206
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
LD Y + G + A +FD L ++ V+W A++ G+ +
Sbjct: 207 -----------------------LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 243
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G + + +F M R G + ++T S++ S + + +L+ GK +HA ++SGE S V
Sbjct: 244 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 303
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N ++ MY+K+G++ AR+VF+ + +++ V+W SM+ A AQ+GLG EA+ FE M + G
Sbjct: 304 GNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 362
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+ + IT++ +LTAC+HGGLV++G++Y++MMK + ++P H+ ++VDLLGRAGLL +A
Sbjct: 363 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDA 421
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
FI MP++P WG+LL +CR+HKN +G+ AA+ + ++PD++G L N+Y+S
Sbjct: 422 LVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYAST 481
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+W+ AA +RK MK GVKK SWV+I+N VH+F D HP+ + IY K +I +I
Sbjct: 482 GQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQI 541
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
++ G+VP+T VL V+E ++ L++HSEK+A+AF LI+ P T+RIMKN+R+C DCH
Sbjct: 542 RKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCH 601
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
SA ++I K+ REIVVRD RFHHF G CSC DYW
Sbjct: 602 SAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 96/433 (22%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+++ + L + Y L+ + + R+ + +HA + SVFL NSL++ Y K
Sbjct: 52 LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+++ A++VFD MP + +CSW ++++ YA+ D+ E L+P
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQN---DMPDEALGLLPGMLR---------- 158
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
GRFK P FT S+L + A G+++H+ VK V
Sbjct: 159 ---GRFK---------------PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDV 200
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V ++LL+MYA+ G MA AVFD + KN SW
Sbjct: 201 YVGSALLDMYARCGRMDMAIAVFDQLESKNGVSW-------------------------- 234
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
N++IAG+++ G L MFA M ++ + FT +S SA A + L+ GK +
Sbjct: 235 -----NALIAGFARKGDGETTLLMFAEMQRN-GFEATHFTYSSVFSAIAGIGALEQGKWV 288
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA++I++ + VGN ++ YAK G +++D
Sbjct: 289 HAHMIKSGERLSAFVGNTILDMYAKSG-----------------------SMID------ 319
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
AR++FD + +DVV W +ML + Q GL ++AV F M + G N T ++L+
Sbjct: 320 ----ARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 421 VSSSLASLDHGKQ 433
S + GKQ
Sbjct: 376 ACSHGGLVKEGKQ 388
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL++ S + +G+ +HA +K H V++ ++L++ YA+
Sbjct: 168 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARC-------------- 213
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
GR+D+A VF+ + +++ VSW +I + G + + MF E
Sbjct: 214 -----------------GRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAE 256
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++ T FT +SV ++ +G L GK VH+ ++K+G V N++L+MYAK G
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 316
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAG 251
+ A+ VFD + K+V +WN +++ G A F++M + + +T+ S++
Sbjct: 317 MIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTA 376
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPD 277
S G E F +M+K+ +L+P+
Sbjct: 377 CSHGGLVKEGKQYF-DMMKEYNLEPE 401
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +IK G LS F+ N++++ YAK+ S+ A+KVFD + K + +WN++L+A+A+
Sbjct: 285 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ 344
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +GR A+ F EM + V Q T S+
Sbjct: 345 YG-----------------------------LGR--EAVTHFEEMRKCGVHLNQITFLSI 373
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
L +C+ G + GK+ + + L ++ +++++ + G
Sbjct: 374 LTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAG 416
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/726 (36%), Positives = 401/726 (55%), Gaps = 77/726 (10%)
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ I A++VF+++P + + +++ Y + RL A +F+ MP RD VSW ++I
Sbjct: 48 SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGC 107
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
E G A+++F EM + V+ S TA+ ++GC
Sbjct: 108 VECGDMNTAVKLFDEMPERSVV-----------SWTAM-----------------VNGCF 139
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+ G A+ +F M +K+ ++WN +V ++ G++D A F QM +
Sbjct: 140 -----------RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+V++W +MI G QN EAL +F NML+ +K ++ACAN +G Q+
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLR-CCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H II+ F V +LI+ YA
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCK--------------------------------- 274
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
IG +R++FD V WTA+L GY N ++DA+ +F M+R PN T ++ L+
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S+L +LD GK++H A++ G + V N+L+ MYS +GN+N A VF I +++ V
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIV 393
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR-YYNM 539
SW S+IV AQHG G+ A +F +M+ L +PD IT+ G+L+AC+H G +E+G++ +Y M
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
++ I H+ MVD+LGR G L+EA IE M ++P+ + W +LLSACR+H ++D
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
G+ AA + ++ +S AY L N+Y+S G+W + + +R MK G+ K G SWV I+
Sbjct: 514 RGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIR 573
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
K H F D H R IY K+ + +++KE+G+ PD S LHDVE++ KE+ML +HSE
Sbjct: 574 GKKHEFFSGDQPHCSR--IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSE 631
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
+LAIAFGLI+T E + + +MKNLRVC DCH+ IK I +V REIV+RD RFHHFK G C
Sbjct: 632 RLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTC 691
Query: 780 SCRDYW 785
SC DYW
Sbjct: 692 SCGDYW 697
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 221/489 (45%), Gaps = 98/489 (20%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV +++N ++ + A+++F +MPVK +WN+++ Y + G++D A ++F MP
Sbjct: 127 SVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
++ +SWTT+I ++ R A+ +F M++ + T T V+ +C G +
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
VH ++K G V+ SL+ YA + R
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYA-------------------------------NCKR 275
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+ +R FD+ + V W ++++GYS N +AL +F+ ML++S L P++ T AS L+
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL-PNQSTFASGLN 334
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
+C+ L L GK++H ++ + VGN+L+ Y+
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDS-------------------- 374
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
G++ A +F + + +V+W +++VG Q+G K A +F M+R
Sbjct: 375 -------------GNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
+P+ T + +LS S L+ G+++ Y + IN
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLEKGRKL---------------------FYYMSSGIN-- 458
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
H ++ +T M+ L + G +EA +L ERM+ +KP+ + ++ +L+AC
Sbjct: 459 -------HIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSACRM 508
Query: 527 GGLVEQGQR 535
V++G++
Sbjct: 509 HSDVDRGEK 517
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 204/421 (48%), Gaps = 25/421 (5%)
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
V++ H+ S R+D AR F+Q+ V + MI GY+++ +AL +F D
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLF-----DEMPV 94
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG-NALISCYAKVGGVEIAQK 334
D + S +S C ++ G A + E V A+++ + G V+ A++
Sbjct: 95 RDVVSWNSMISGC-----VECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAER 149
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ Q + + A+ +++ GY++ G + A ++F + ++V++WT M+ G +QN +
Sbjct: 150 LFYQMPVK--DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A++LF++M+R K + + +++ ++ + G Q+H ++ G VS +LI
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLI 267
Query: 455 TMYSKAGNINAARRVFN-LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
T Y+ I +R+VF+ +H ++ WT+++ + + E+A+ +F ML I P+
Sbjct: 268 TFYANCKRIGDSRKVFDEKVH--EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPN 325
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYN 571
T+ L +C+ G ++ G+ + + K+ F S+V + +G + +A +
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEMHGVAV---KLGLETDAFVGNSLVVMYSDSGNVNDAVS 382
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI--EPDNSGAYSALCNLYSSC 629
+ + +V+W S++ C H + +++ + EPD ++ L + S C
Sbjct: 383 VFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEI-TFTGLLSACSHC 440
Query: 630 G 630
G
Sbjct: 441 G 441
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 80/343 (23%)
Query: 13 LEFYAHLLQSNLKSRN-PF--------------VGKLVHARIIKCGLHLSVFLKNSLMNF 57
L+ + ++L+ +KS + PF +G VH IIK G ++ SL+ F
Sbjct: 210 LDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF 269
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
YA + I ++KVFDE + + W +LS Y+
Sbjct: 270 YANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN------------------------- 304
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ ++A+ +F M+++ +LP Q T S L SC+ALG L GK++H VK GL
Sbjct: 305 ------KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE 358
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
V NSL+ MY+ G+ A +VF + K++ SWN
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN---------------------- 396
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
S+I G +Q+G A +F M++ + +PD+ T LSAC++ L+ G
Sbjct: 397 ---------SIIVGCAQHGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKG 446
Query: 298 KQIHAYIIR--TEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+++ Y+ D ++ + G ++ A++++E+
Sbjct: 447 RKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 267/710 (37%), Positives = 394/710 (55%), Gaps = 71/710 (10%)
Query: 81 SWNTILSAYAKQGRL-DLACEVFNLMPNR--DSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
S++++L A A L A +F L P + + ++ + G ++A+ +F+EM+
Sbjct: 51 SFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEML 110
Query: 138 QD-QVLPT-QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
P Q T L SC+ + L G+ V ++ VK GL V +SL++MYA GD
Sbjct: 111 HAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGD 170
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD E VV WN+++A Y +N
Sbjct: 171 VAAARLVFDAAE-------------------------------ESGVVMWNAIVAAYLKN 199
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G E + MF ML + + D+ TL S ++AC + KLGK + +
Sbjct: 200 GDWMEVVEMFKGML-EVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGH------------ 246
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
V++ G++ N T L+D Y K G+IG ARR+FD ++ R
Sbjct: 247 --------------------VDEEGLAR-NPKLVTALMDMYAKCGEIGKARRLFDGMQSR 285
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVVAW+AM+ GY Q ++A+ LF M +PN+ T+ ++LS + L +L+ GK +H
Sbjct: 286 DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVH 345
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ R + + + AL+ Y+K G I+ A F + + + +WT++I +A +G G
Sbjct: 346 SYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKN-SWTWTALIKGMATNGRG 404
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA++LF M E GI+P +T++GVL AC+H LVE+G+R+++ M + IKP H+
Sbjct: 405 REALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGC 464
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDLLGRAGL+ EAY FI MP+EP+ V W +LLS+C VH+N+ +G+ A ++++ + P +
Sbjct: 465 MVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSH 524
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
SG Y L N+Y+S G+W+DAA +RK MK G++KT G S +++ V F ED HP+
Sbjct: 525 SGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPEL 584
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY K+ ++ IK G+VP+TA V +VEE KE + HHSEKLAIAFGL+ T
Sbjct: 585 REIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGAT 644
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCHSA K I K+ DREIVVRD FHHFK G CSC DYW
Sbjct: 645 IRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 214/488 (43%), Gaps = 105/488 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ V A +K GL F+ +SL++ YA ++ A+ VFD + WN I++AY
Sbjct: 138 VGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYL 197
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G W + + MF M++ V + T+ S
Sbjct: 198 KNG------------------DWMEV-------------VEMFKGMLEVGVAFDEVTLVS 226
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ +C +GD GK V V + GL+ + +L++MYAK G+ A+ +FDGM+ ++
Sbjct: 227 VVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRD 286
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +W ++MI+GY+Q EALG+F+ M +
Sbjct: 287 VVAW-------------------------------SAMISGYTQADQCREALGLFSEM-Q 314
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ ++P+ T+ S LSACA L L+ GK +H+Y+ R T +G AL+ YAK G ++
Sbjct: 315 LARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCID 374
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A + F+S+ ++ WTA++ G N
Sbjct: 375 DAVE---------------------------------AFESMPVKNSWTWTALIKGMATN 401
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
G ++A+ELF SM G +P + T +L S ++ G++ S R G +
Sbjct: 402 GRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEH 461
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERML 506
++ + +AG ++ A + + V W +++ + A H G+GEEA++
Sbjct: 462 YGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQI---- 517
Query: 507 ELGIKPDH 514
+ + P H
Sbjct: 518 -ISLNPSH 524
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 377/638 (59%), Gaps = 68/638 (10%)
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMA 199
++P + +L CT LG + G+ VH+ +V + L + + N ++NMYAK G
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG----- 137
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
LD AR FD+M +D+VTW ++IAG+SQN
Sbjct: 138 --------------------------CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPR 171
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+AL +F ML+ +P+ FTL+S L A + L G Q+HA+ ++ + ++ VG+AL
Sbjct: 172 DALLLFPQMLR-LGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSAL 230
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ YA+ G + A+ FD + + V+
Sbjct: 231 VDMYARC---------------------------------GHMDAAQLAFDGMPTKSEVS 257
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + G + A+ L M R+ +P ++T S++LS +S+ +L+ GK +HA +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+SG + N L+ MY+KAG+I+ A+RVF+ + + + VSW +M+ AQHGLG+E +
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHGLGKETL 376
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
FE+ML +GI+P+ I+++ VLTAC+H GL+++G Y+ +MK +K++P H+ + VDL
Sbjct: 377 DRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDL 435
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGR GLL A FI MP+EP WG+LL ACR+HKN++LG AAE+ ++P +SG
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPR 495
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S G+W D A +RK MK GVKK SWV+I+N VH+F D HP+ I
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIR 555
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
K +I +IKE+G+VPDT+ VL V++ +E+ L++HSEKLA+AF L++TP + +RI
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
KN+RVC DCH+AIKF+ K+VDREI+VRD RFH F+ G
Sbjct: 616 KNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 199/378 (52%), Gaps = 58/378 (15%)
Query: 263 GMFA-NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF-DATGPVGNALI 320
G++A ++++ SL PD + L C L K++ G+ +HA+++ + F D + N ++
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ YAK G ++ ARR+FD + +D+V W
Sbjct: 131 NMYAKCGCLD---------------------------------DARRMFDEMPTKDMVTW 157
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TA++ G+ QN +DA+ LF M+R G +PN++TLS++L S S LD G Q+HA L+
Sbjct: 158 TALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK 217
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G SS+ V +AL+ MY++ G+++AA+ F+ + + E VSW ++I A+ G GE A+
Sbjct: 218 YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE-VSWNALISGHARKGEGEHALH 276
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA----SM 556
L +M +P H TY VL+AC G +EQG+ + H IK A ++
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVH-----AHMIKSGLKLIAFIGNTL 331
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL-----LLI 611
+D+ +AG + +A + + ++PDVV+W ++L+ C H LGK ++ + I
Sbjct: 332 LDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQH---GLGKETLDRFEQMLRIGI 387
Query: 612 EPDNSGAYSALCNLYSSC 629
EP+ S LC L ++C
Sbjct: 388 EPNE---ISFLCVL-TAC 401
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 217/501 (43%), Gaps = 95/501 (18%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
SL+ Y+ LL+ + +GK+ RI+ L S FL N L+
Sbjct: 82 SLVPDYNLYSKLLKECTR-----LGKVEQGRIVHAHLVDSHFLDNHLV------------ 124
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
N I++ YAK G LD A +F+ MP +D V+WT +I +++ R +
Sbjct: 125 -------------LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPR 171
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+A+ +F +M++ P FT++S+L + + L G ++H+F +K G V V ++L+
Sbjct: 172 DALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALV 231
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+MYA+ G A+ FDGM K+ SW N+
Sbjct: 232 DMYARCGHMDAAQLAFDGMPTKSEVSW-------------------------------NA 260
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+I+G+++ G AL + M + + +P FT +S LSACA++ L+ GK +HA++I++
Sbjct: 261 LISGHARKGEGEHALHLLWKMQR-KNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKS 319
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+GN L+ YAK G ++ A +R
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDA---------------------------------KR 346
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+FD L DVV+W ML G Q+GL K+ ++ F M+R G +PN + +L+ S
Sbjct: 347 VFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGL 406
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
LD G + + + + + G ++ A R + W +++
Sbjct: 407 LDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLG 466
Query: 488 ALAQHGLGEEAIQLFERMLEL 508
A H E + ER EL
Sbjct: 467 ACRMHKNMELGVYAAERAFEL 487
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 275/763 (36%), Positives = 429/763 (56%), Gaps = 48/763 (6%)
Query: 35 VHARIIKCGLHL------SVFLKNSLMN-FYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+HAR+ G HL + L NSL+N + YA +FD MP T ++T L
Sbjct: 18 LHARLTTSG-HLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPSTFL-FDTALR 75
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
A ++ G P+R + +F M + V P FT
Sbjct: 76 ACSRAGS----------DPHRPFL--------------------LFRRMRRAGVRPDGFT 105
Query: 148 VTSVLASCTALG----DLSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAV 202
L C++ L +H+ ++T L S V+NSL++MY ++G A+
Sbjct: 106 F-HFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRA 164
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + +K+ +W +++S G L + Q RDV++W S+IA YS+ EA+
Sbjct: 165 FDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAV 224
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G F ML + PD+ T+ + LSACA L+ L+LG+ +H + + + ALI
Sbjct: 225 GCFKTMLS-HGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDM 283
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G AQ++ + G ++ ++DGY K G + AR +FD + RD++ + +
Sbjct: 284 YAKCGDFGHAQQVFDALGRGP-RPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNS 342
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY +G ++A+ LF SM R + +N+T+ +L+ +SL +L G+ +HA +
Sbjct: 343 MMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL 402
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + + AL+ MY K G ++ A VF + +++ +WT+MI LA +G+G+ A++ F
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRM-GKRDVHTWTAMIAGLAFNGMGKAALEHF 461
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M G +P+ ++Y+ VLTAC+H L+ +G+ Y++ M+ ++ I P H+ M+DLLGR
Sbjct: 462 YQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGR 521
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+GLL EA + ++ MP++P+ V W S+LSACRVHK++DL + AAE LL +EPD G Y L
Sbjct: 522 SGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQL 581
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y +WE+A+ IR M+ VKKT G+S + + +VH F V D HP+ I +
Sbjct: 582 YNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAML 641
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+I +K +G+ P T+ + DV+E+ KEQ L HSEKLAIAFGLI+ N + I KNL
Sbjct: 642 EEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNL 701
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHSAIK I +L +REI+VRD +RFHHF++G CSC D+W
Sbjct: 702 RVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDFW 744
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 156/338 (46%), Gaps = 49/338 (14%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM---P 75
+L + K ++ +G+ +H + + G+ S L +L++ YAK +A++VFD + P
Sbjct: 245 VLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGP 304
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
SWN I+ Y K G +D+A +F+ M RD +++ +++ Y G+ + A+ +F+
Sbjct: 305 RPQ--SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMS 362
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + FTV ++L +C +LG L G+ +H+ + + + + + +LL+MY K G
Sbjct: 363 MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGR 422
Query: 196 EMMAKAVFDGMRLKNVSSWN-----------------------------------VVVSL 220
A VF M ++V +W V++
Sbjct: 423 VDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTA 482
Query: 221 HIHSGRLDLARAQFDQM-----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
HS L+ R FD+M I + + MI ++G EA+ +++K ++
Sbjct: 483 CSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAM----DLVKTMPIQ 538
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
P+ AS LSAC + + L + ++++ E D G
Sbjct: 539 PNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDG 576
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/742 (35%), Positives = 419/742 (56%), Gaps = 75/742 (10%)
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCS-------WNTILSAYAKQGRLDLACEVFNLM 105
+L+ F A +S+ + K + ++ V+ S N++++ Y+K G+ A ++F+ M
Sbjct: 28 NLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRM 87
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAG 164
R+ VSW+ +++ Y G + +F +V D P ++ T VL+ C G + G
Sbjct: 88 LQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEG 147
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
K+ H +++K+GL V N+L++MY++ H+
Sbjct: 148 KQCHGYLLKSGLLLHQYVKNALIHMYSR--------------------------CFHV-- 179
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
D A D + DV ++NS+++ ++G EA + M+ D + D T S
Sbjct: 180 ---DSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMV-DECVIWDSVTYVSV 235
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L CA + L+LG QIHA +++T G V + +S
Sbjct: 236 LGLCAQIRDLQLGLQIHAQLLKT-----GLVFDVFVS----------------------- 267
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+TL+D Y K G++ AR+ FD LRDR+VVAWTA+L Y QNG ++ + LF M
Sbjct: 268 -----STLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKME 322
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
E +PN +T + +L+ +SL +L +G +H + SG + L V NALI MYSK+GNI+
Sbjct: 323 LEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNID 382
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
++ VF+ + R + ++W +MI + HGLG++A+ +F+ M+ G P+++T++GVL+AC
Sbjct: 383 SSYNVFSNMMNR-DVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSAC 441
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP-LEPDVV 583
H LV++G Y++ + ++P H+ MV LLGRAGLL EA NF++ ++ DVV
Sbjct: 442 VHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVV 501
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
AW +LL+AC +H+N +LGK E ++ ++P + G Y+ L N+++ KW+ IRK MK
Sbjct: 502 AWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMK 561
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
+KK G SW+ I+N HVF E HP+ I+ K+ ++ IK +G+ PD VLH
Sbjct: 562 ERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLH 621
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
DVE++ KE L HHSEKLA+A+GL+ P +RI+KNLR+C+DCH A+K I K +R I
Sbjct: 622 DVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLI 681
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRDA RFHHF++GLC+C D+W
Sbjct: 682 IVRDANRFHHFREGLCTCNDHW 703
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 214/482 (44%), Gaps = 104/482 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK H ++K GL L ++KN+L++ Y++ + A ++ D +P + S+N+ILSA +
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A +V M + + V W ++ T SV
Sbjct: 207 SGCRGEAAQVLKRMVD-ECVIWDSV------------------------------TYVSV 235
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C + DL G ++H+ ++KTGL V V+++L++ Y K G+ + A+ FDG+R +NV
Sbjct: 236 LGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNV 295
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM-LK 270
+W V++ Y QNG+ E L +F M L+
Sbjct: 296 VAWTAVLT-------------------------------AYLQNGHFEETLNLFTKMELE 324
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D+ +P++FT A L+ACA+L L G +H I+ + F VGNALI+ Y+K
Sbjct: 325 DT--RPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKS---- 378
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
G+I + +F ++ +RDV+ W AM+ GY +
Sbjct: 379 -----------------------------GNIDSSYNVFSNMMNRDVITWNAMICGYSHH 409
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSV 449
GL K A+ +F+ M+ G PN T +LS LA + G ++ + L
Sbjct: 410 GLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEH 469
Query: 450 SNALITMYSKAGNINAAR---RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
++ + +AG ++ A + + W + V+W +++ A H Q+ E ++
Sbjct: 470 YTCMVALLGRAGLLDEAENFMKTTTQVKW--DVVAWRTLLNACHIHRNYNLGKQITETVI 527
Query: 507 EL 508
++
Sbjct: 528 QM 529
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 66/342 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L + R+ +G +HA+++K GL VF+ ++L++ Y K + A+K FD +
Sbjct: 232 YVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLR 291
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + +W +L+AY + G F+ + +F +
Sbjct: 292 DRNVVAWTAVLTAYLQN-------------------------------GHFEETLNLFTK 320
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + P +FT +L +C +L L+ G +H +V +G + V N+L+NMY+K G+
Sbjct: 321 MELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGN 380
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ VF M ++V +W N+MI GYS +
Sbjct: 381 IDSSYNVFSNMMNRDVITW-------------------------------NAMICGYSHH 409
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +AL +F +M+ P+ T LSAC +L ++ G I++ +FD +
Sbjct: 410 GLGKQALLVFQDMMSAGEC-PNYVTFIGVLSACVHLALVQEGFYYFDQIMK-KFDVEPGL 467
Query: 316 GN--ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
+ +++ + G ++ A+ ++ + +V+A+ TLL+
Sbjct: 468 EHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNA 509
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/646 (37%), Positives = 374/646 (57%), Gaps = 67/646 (10%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++ PT + + +C +L +KVH+ + + +G + NSL+++Y K G + A
Sbjct: 46 ELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEA 105
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ VFD MR K D+V+W S+IAGY+QN
Sbjct: 106 RKVFDEMRRK-------------------------------DMVSWTSLIAGYAQNDMPE 134
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EA+G+ MLK KP+ FT AS L A +G+QIHA ++ ++ VG+AL
Sbjct: 135 EAIGLLPGMLK-GRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSAL 193
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ YA+ G +++A + FD L ++ V+
Sbjct: 194 LDMYARCGMMDMATAV---------------------------------FDKLDSKNGVS 220
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + G + A+ F M+R G + ++T S++ S + L +L+ GK +HA +
Sbjct: 221 WNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMI 280
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+S + + N L+ MY+K+G++ AR+VF+ + ++ V+W +M+ A AQ+GLG+EA+
Sbjct: 281 KSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVD-DKDLVTWNTMLTAFAQYGLGKEAV 339
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
FE M + GI + +T++ +LTAC+HGGLV++G+RY+ MMK + ++P HF ++V L
Sbjct: 340 SHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVAL 398
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGRAGLL A FI MP+EP WG+LL+ACR+HKN +G+ AA+ + ++PD+SG
Sbjct: 399 LGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPP 458
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S G+W+ AA +R+ MK GVKK SWV+++N VH+F D HP+ + IY
Sbjct: 459 VLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIY 518
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+I +I++ G+VPD VL V++ +E L++HSEKLA+AF LI P T+RIM
Sbjct: 519 KMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIM 578
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KN+R+C DCHSA K+I K+ REIVVRD RFHHF G CSC DYW
Sbjct: 579 KNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 198/477 (41%), Gaps = 96/477 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y + + +S+N + VHA + FL NSL++ Y K S+ A+KVFDEM
Sbjct: 54 YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMR 113
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW ++++ YA+ D+ E L+P GRFK
Sbjct: 114 RKDMVSWTSLIAGYAQN---DMPEEAIGLLPGMLK-------------GRFK-------- 149
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
P FT S+L + A D G+++H+ VK V V ++LL+MYA+ G
Sbjct: 150 -------PNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGM 202
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MA AVFD + KN SW N++I+G+++
Sbjct: 203 MDMATAVFDKLDSKNGVSW-------------------------------NALISGFARK 231
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G AL FA ML++ + FT +S S+ A L L+ GK +HA++I++ T
Sbjct: 232 GDGETALMTFAEMLRN-GFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFA 290
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN L+ YAK G +++D AR++FD + D+
Sbjct: 291 GNTLLDMYAKSG-----------------------SMID----------ARKVFDRVDDK 317
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V W ML + Q GL K+AV F M + G N T +L+ S + GK+
Sbjct: 318 DLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYF 377
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG +N A + W +++ A H
Sbjct: 378 EMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMH 434
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 165/326 (50%), Gaps = 38/326 (11%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++L L P + ++ACA + L+ +++HA++ + F + N+LI Y K
Sbjct: 40 DLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKC 99
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G V A+K +FD +R +D+V+WT+++ G
Sbjct: 100 GSVLEARK---------------------------------VFDEMRRKDMVSWTSLIAG 126
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QN + ++A+ L M++ KPN +T +++L + + A G+QIHA A++
Sbjct: 127 YAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHED 186
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V +AL+ MY++ G ++ A VF+ + + VSW ++I A+ G GE A+ F ML
Sbjct: 187 VYVGSALLDMYARCGMMDMATAVFDKLD-SKNGVSWNALISGFARKGDGETALMTFAEML 245
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G + H TY V ++ G +EQG+ + +M+K+ K+ + +++D+ ++G
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGN--TLLDMYAKSGS 303
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSA 591
+ +A + + + D+V W ++L+A
Sbjct: 304 MIDARKVFDRVD-DKDLVTWNTMLTA 328
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 48/323 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL++ + +G+ +HA +KC H V++ ++L++ YA+ + A VFD++
Sbjct: 155 FASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLD 214
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K SWN ++S +A++G + A+ F E
Sbjct: 215 SKNGVSWNALISGFARKGDGE-------------------------------TALMTFAE 243
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+++ T FT +SV +S LG L GK VH+ ++K+ N+LL+MYAK G
Sbjct: 244 MLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGS 303
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAG 251
+ A+ VFD + K++ +WN +++ G A + F++M I + VT+ ++
Sbjct: 304 MIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTA 363
Query: 252 YSQNGYDFEALGMFANMLKDSSLKP--DKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
S G E F M+K+ L+P D F L A L L +I +
Sbjct: 364 CSHGGLVKEGKRYF-EMMKEYDLEPEIDHFVTVVALLGRAGLLNFAL-----VFIFKMPI 417
Query: 310 DATGPVGNALISCY-----AKVG 327
+ T V AL++ AKVG
Sbjct: 418 EPTAAVWGALLAACRMHKNAKVG 440
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/701 (36%), Positives = 395/701 (56%), Gaps = 66/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AY+ +G +D+A VF+ + +D VSWT ++ Y E ++ ++++F +M P
Sbjct: 177 LIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPN 236
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT++ L SC L + GK VH +K + V +LL +YAK G+ + D
Sbjct: 237 NFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGE------IID 290
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
RL F++M + D++ W+ MIA Y+Q+ EAL +
Sbjct: 291 AQRL-------------------------FEEMPKTDLIPWSLMIARYAQSDRSKEALDL 325
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +S+ P+ FT AS L ACA+ L LGKQIH+ +++ ++ V NA+
Sbjct: 326 FLRM-RQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAI----- 379
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+D Y K G+I + ++F+ L DR+ V W ++
Sbjct: 380 ----------------------------MDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
VGY Q G + A+ LF M+ +P T S++L S+SLA+L+ G QIH+ +++
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
V+N+LI MY+K G IN AR F+ ++ R E VSW +MI + HG+ EA+ LF+
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDE-VSWNAMICGYSMHGMSMEALNLFDM 530
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M KP+ +T+VGVL+AC++ GL+ +GQ ++ M + IKP H+ MV LLGR G
Sbjct: 531 MQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLG 590
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
EA I + +P V+ W +LL AC +HK +DLG++ A+ +L +EP + + L N
Sbjct: 591 RFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSN 650
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y++ G+W++ A +RK M+ V+K G SWV+ Q VH F V D HP I +
Sbjct: 651 MYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEW 710
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ + ++ G+VPD +VL DV++D KE+ L HSE+LA+A+GLI TP + ++RI+KNLR+
Sbjct: 711 LNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRI 770
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ +K I K+V REIV+RD RFHHF+ G+CSC DYW
Sbjct: 771 CIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/581 (26%), Positives = 271/581 (46%), Gaps = 100/581 (17%)
Query: 16 YAHLLQSNLKS-RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
YAH+LQ +++ +P GK +H I+K G L +F +N L+NFY ++ S+ A K+FDEM
Sbjct: 37 YAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEM 96
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P +++S+ T+ Y+ +F A+ +
Sbjct: 97 -------------------------------PQTNTISFVTLAQGYSRDHQFHQALHFIL 125
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+ ++ F T++L ++ +H+ V K G V +L++ Y+ G
Sbjct: 126 RIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRG 185
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ +A+ VFD + K+ +V+W M+A Y++
Sbjct: 186 NVDVARHVFDDICCKD-------------------------------MVSWTGMVACYAE 214
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
N + E+L +F N ++ KP+ FT++ L +C LE +GK +H ++ +D
Sbjct: 215 NCFYEESLQLF-NQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLF 273
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
VG AL+ YAK G +I A+R+F+ +
Sbjct: 274 VGIALLELYAKSG---------------------------------EIIDAQRLFEEMPK 300
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D++ W+ M+ Y Q+ +K+A++LF M + PNN+T +++L +S SLD GKQI
Sbjct: 301 TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H+ L+ G S++ VSNA++ +Y+K G I + ++F + R + V+W ++IV Q G
Sbjct: 361 HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTIIVGYVQLGD 419
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
GE A+ LF MLE ++P +TY VL A +E G + +++ K T
Sbjct: 420 GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVV-AN 478
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
S++D+ + G + +A + M + D V+W +++ +H
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMH 518
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 160/330 (48%), Gaps = 67/330 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P F +A +LQ+ S + +GK +H+ ++K GL+ +VF+ N++M+
Sbjct: 334 VVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMD------------ 381
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
YAK G ++ + ++F +P+R+ V+W TIIV Y ++G +
Sbjct: 382 -------------------VYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGER 422
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ +F M++ + PT+ T +SVL + +L L G ++HS +KT + V NSL++
Sbjct: 423 AMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLID 482
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MYAK G A+ FD M +RD V+WN+M
Sbjct: 483 MYAKCGRINDARLTFDKMN-------------------------------KRDEVSWNAM 511
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I GYS +G EAL +F +M++ + KP+K T LSAC+N L G Q H + +
Sbjct: 512 ICGYSMHGMSMEALNLF-DMMQHTDCKPNKLTFVGVLSACSNAGLLYKG-QAHFESMSKD 569
Query: 309 FDATGPVGN--ALISCYAKVGGVEIAQKIV 336
+D + + ++ ++G + A K++
Sbjct: 570 YDIKPCIEHYTCMVWLLGRLGRFDEAMKLI 599
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/751 (35%), Positives = 400/751 (53%), Gaps = 98/751 (13%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V+ ++I GLH FL +N ++YA K F E+ + WN I+ Y ++
Sbjct: 21 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 80
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+D IRM+++M QV P FT VL +
Sbjct: 81 VD-------------------------------APIRMYMDMQISQVHPNCFTFLYVLKA 109
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C GK++H K G V V NSL++MYAK G
Sbjct: 110 CGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFG-------------------- 149
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
++ AR FD++ +R VV+W S+I+GY QNG EAL +F M + ++
Sbjct: 150 -----------QISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM-RQCNV 197
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
KPD L S ++A N+E L GK IH + + + + +L + YAK G VE+A
Sbjct: 198 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA-- 255
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
R F+ + +++ W AM+ GY NG +
Sbjct: 256 -------------------------------RFFFNRMEKPNLILWNAMISGYANNGYGE 284
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A++LFR M+ + + ++ T+ + + S+ + SL+ + + +S V+ LI
Sbjct: 285 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 344
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+K G+I AR VF+ + ++ V W+ MI+ HG G+EAI L+ M + G+ P+
Sbjct: 345 DMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 403
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
T++G+LTAC + GLV++G +++M + H I+P H++ +VDLLGRAG L +AY+FI
Sbjct: 404 GTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 462
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
+MP++P V WG+LLSAC++H+ + LG+IAAE+L +++P N+G Y L NLY+S W
Sbjct: 463 SMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTR 522
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
AN+R M G+ K G S ++I + F V D HP+ I+ ++ ++ +K G+
Sbjct: 523 VANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGY 582
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VP SVLHD+ + E+ L HHSE+LA+A+G+IST TTLRI KNLR C +CHSAIK
Sbjct: 583 VPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKL 642
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KLVDREI++RDA RFHHFK G+CSC D+W
Sbjct: 643 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 205/476 (43%), Gaps = 100/476 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + K G +VF++NSL++ YAK ISYA+ VFD++ +T+ SW +I+S Y
Sbjct: 118 IGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYV 177
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G D + A+ +F EM Q V P + S
Sbjct: 178 QNG---------------DPME----------------ALNVFKEMRQCNVKPDWIALVS 206
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ + T + DL GK +H V K GL ++ SL MYAK G +A+ F+ M N
Sbjct: 207 VMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPN 266
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ WN ++S GY+ NGY EA+ +F M+
Sbjct: 267 LILWNAMIS-------------------------------GYANNGYGEEAIKLFREMIT 295
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+++ D T+ S + A A + L+L + + YI ++E+ V LI YAK G +
Sbjct: 296 -KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSI- 353
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
YL AR +FD + D+DVV W+ M++GY +
Sbjct: 354 ------------YL--------------------ARCVFDRVADKDVVLWSVMIMGYGLH 381
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G ++A+ L+ M + G PN+ T +L+ + + G ++ G
Sbjct: 382 GHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHY 441
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGE-EAIQLF 502
+ ++ + +AG +N A + + W +++ A H LGE A QLF
Sbjct: 442 SCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLF 497
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/751 (35%), Positives = 400/751 (53%), Gaps = 98/751 (13%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V+ ++I GLH FL +N ++YA K F E+ + WN I+ Y ++
Sbjct: 6 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 65
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+D IRM+++M QV P FT VL +
Sbjct: 66 VDAP-------------------------------IRMYMDMQISQVHPNCFTFLYVLKA 94
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C GK++H K G V V NSL++MYAK G
Sbjct: 95 CGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFG-------------------- 134
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
++ AR FD++ +R VV+W S+I+GY QNG EAL +F M + ++
Sbjct: 135 -----------QISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM-RQCNV 182
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
KPD L S ++A N+E L GK IH + + + + +L + YAK G VE+A
Sbjct: 183 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA-- 240
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
R F+ + +++ W AM+ GY NG +
Sbjct: 241 -------------------------------RFFFNRMEKPNLILWNAMISGYANNGYGE 269
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A++LFR M+ + + ++ T+ + + S+ + SL+ + + +S V+ LI
Sbjct: 270 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 329
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+K G+I AR VF+ + ++ V W+ MI+ HG G+EAI L+ M + G+ P+
Sbjct: 330 DMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 388
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
T++G+LTAC + GLV++G +++M + H I+P H++ +VDLLGRAG L +AY+FI
Sbjct: 389 GTFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIM 447
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
+MP++P V WG+LLSAC++H+ + LG+IAAE+L +++P N+G Y L NLY+S W
Sbjct: 448 SMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTR 507
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
AN+R M G+ K G S ++I + F V D HP+ I+ ++ ++ +K G+
Sbjct: 508 VANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGY 567
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VP SVLHD+ + E+ L HHSE+LA+A+G+IST TTLRI KNLR C +CHSAIK
Sbjct: 568 VPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKL 627
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KLVDREI++RDA RFHHFK G+CSC D+W
Sbjct: 628 ISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 205/476 (43%), Gaps = 100/476 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + K G +VF++NSL++ YAK ISYA+ VFD++ +T+ SW +I+S Y
Sbjct: 103 IGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYV 162
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G D + A+ +F EM Q V P + S
Sbjct: 163 QNG---------------DPME----------------ALNVFKEMRQCNVKPDWIALVS 191
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ + T + DL GK +H V K GL ++ SL MYAK G +A+ F+ M N
Sbjct: 192 VMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPN 251
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ WN ++S GY+ NGY EA+ +F M+
Sbjct: 252 LILWNAMIS-------------------------------GYANNGYGEEAIKLFREMIT 280
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+++ D T+ S + A A + L+L + + YI ++E+ V LI YAK G +
Sbjct: 281 -KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSI- 338
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
YL AR +FD + D+DVV W+ M++GY +
Sbjct: 339 ------------YL--------------------ARCVFDRVADKDVVLWSVMIMGYGLH 366
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G ++A+ L+ M + G PN+ T +L+ + + G ++ G
Sbjct: 367 GHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHY 426
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGE-EAIQLF 502
+ ++ + +AG +N A + + W +++ A H LGE A QLF
Sbjct: 427 SCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLF 482
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 282/800 (35%), Positives = 424/800 (53%), Gaps = 121/800 (15%)
Query: 9 LISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
+++P E YA ++ + S G +VH RIIK GL +
Sbjct: 220 VVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNL------------------ 261
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
WN++++ Y K G L A ++F + +D VSW +I + G +
Sbjct: 262 --------------WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGE 307
Query: 128 NAIRMFVEM--VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
NA+ +F M V+ V P + T S+L++ + L L G+++H+ + + L ++TNS
Sbjct: 308 NALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNS 367
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+ Y+K + + AR F++++ RD+++W
Sbjct: 368 LITFYSKCRE-------------------------------VGKAREIFERLLLRDIISW 396
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA----NLEKLKLGKQIH 301
NSM+AGY QN +F M+ S ++PD +L +A + L + GK+IH
Sbjct: 397 NSMLAGYEQNEQQGRCFDIFKRMML-SGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIH 455
Query: 302 AYIIR--TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
YI+R T + V NA++ YAK + +I
Sbjct: 456 GYILRRITPGGVSLSVSNAILKMYAK------------------------------FNRI 485
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
D A +IF +++RD +W AM+ GY +N +D + +F ++++G ++ +LS +L
Sbjct: 486 AD---AEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILL 542
Query: 420 SVSSSLASLDHGKQIHA--SALRSGEA-----SSLSVSNALITMYSKAGNINAARRVFNL 472
+ L SL GKQ HA + L +G+ S LS++NALI+MYSK G+I A +VF L
Sbjct: 543 TSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVF-L 601
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
R++ SWT+MI A HGL EA+QLFERM GIKP+ +T++ +L AC HGGLV++
Sbjct: 602 KMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQE 661
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN-----MPLEPDVV-AWG 586
G Y++ M N + + P+ H+A M+DL GR+G A + +E P D++ W
Sbjct: 662 GSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWK 721
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
LL AC K LDLG AA K+L +EP++ Y L NLY+S G WEDA +RK+M+ G
Sbjct: 722 VLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKG 781
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
++K G SW+ N+ HVF D HPQR IY K+A++ + MG+VP T VLHDV+
Sbjct: 782 LRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVD 841
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTP-ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
E KE +L HSEKLA++FGL++ N +R+MKNLRVC DCHS +KF L REI++
Sbjct: 842 ETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILL 901
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RD+ RFH F+ G CSC DYW
Sbjct: 902 RDSQRFHLFRDGSCSCGDYW 921
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 158/623 (25%), Positives = 281/623 (45%), Gaps = 123/623 (19%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN SL A LL+ + + + + +H I+ G L ++ + + Y++
Sbjct: 119 PNGFSL-------ASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGV 171
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A++VFDE + L D + W +II Y
Sbjct: 172 LEDAQRVFDETSLLAL-----------------------------DILLWNSIIAAYIFH 202
Query: 124 GRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G + +R+F +MV V+ PT+ T SV+ +C + G+ G VH ++K GL N+
Sbjct: 203 GCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEA-TNL 261
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
NSL+ Y K G L A F+++ +DV
Sbjct: 262 WNSLVTFYGKC-------------------------------GNLQHASQLFERISRKDV 290
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V+WN+MIA Q G ALG+F MLK + ++P++ T S LSA + L L+ G++IH
Sbjct: 291 VSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIH 350
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
A+I R + + N+LI+ Y+K V A++I
Sbjct: 351 AHIFRLSLEVDTSITNSLITFYSKCREVGKAREI-------------------------- 384
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
F+ L RD+++W +ML GYEQN ++F+ M+ G +P++++L+ + +
Sbjct: 385 -------FERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNA 437
Query: 422 ----SSSLASLDHGKQIHASALR--SGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
SS L GK+IH LR + SLSVSNA++ MY+K I A ++F +
Sbjct: 438 ASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKN 497
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
R ++ SW +M+ +++ E+ + +F +L+ G DH++ +LT+C ++ G++
Sbjct: 498 R-DSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQ 556
Query: 536 YYNMMKNVHKIKPTPSHFA------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
++ ++ + + P + +++ + + G +++A M DV +W +++
Sbjct: 557 FHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMI 615
Query: 590 SACRVHKNLDLGKIAAEKLLLIE 612
+ C H +A E L L E
Sbjct: 616 TGCAHH------GLAVEALQLFE 632
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/659 (23%), Positives = 281/659 (42%), Gaps = 128/659 (19%)
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
++ + + + + + F + + + L + ++ RL A ++F+ PNRD +SW
Sbjct: 30 FLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISW 89
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+ +I Y+ G F A +F +M+ + + P F++ S+L + G++ +++H + ++
Sbjct: 90 SALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIR 149
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
TG + + + MY++ G A+ VFD L
Sbjct: 150 TGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSL------------------------- 184
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+ D++ WNS+IA Y +G E L +F M+ + P + T AS ++AC + +
Sbjct: 185 ----LALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGE 240
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
K G +H II+ +AT + N+L++ Y K G ++
Sbjct: 241 EKYGAMVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQ----------------------- 276
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP--KPN 411
A ++F+ + +DVV+W AM+ EQ G ++A+ LFR M++ P +PN
Sbjct: 277 ----------HASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPN 326
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
T ++LS S L++L G++IHA R S++N+LIT YSK + AR +F
Sbjct: 327 RVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFE 386
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ R + +SW SM+ Q+ +F+RM+ GI+PD + + A +
Sbjct: 387 RLLLR-DIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRD---S 442
Query: 532 QGQRYYNMMKNVH-----KIKPTPSHFA-------------------------------- 554
G Y+ K +H +I P +
Sbjct: 443 SGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYS 502
Query: 555 --SMVDLLGRAGLLQEAYNFI-----ENMPLEPDVVAWGSLLSACRVHKNLDLGK---IA 604
+M+D R ++ + PL D V+ LL++C +L LGK
Sbjct: 503 WNAMMDGYSRNAKFEDVLMIFLDILKQGFPL--DHVSLSILLTSCGRLVSLQLGKQFHAV 560
Query: 605 AEKLLLIE--PDNSGAYS---ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
KL + P S AL ++YS CG +DAA + ++ +++ FSW +
Sbjct: 561 VAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQV-----FLKMERKDVFSWTAM 614
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/646 (38%), Positives = 371/646 (57%), Gaps = 67/646 (10%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++ PT S + +C +L +K+H+ + + +G + NSL++MY K + A
Sbjct: 46 ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDA 105
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ VFD MR K D+V+W S+IAGY+QN
Sbjct: 106 RNVFDQMRRK-------------------------------DMVSWTSLIAGYAQNDMPV 134
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EA+G+ MLK KP+ FT AS L A G+QIHA ++ + VG+AL
Sbjct: 135 EAIGLLPGMLK-GRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSAL 193
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ YA+ G +++A + FD L ++ V+
Sbjct: 194 LDMYARCGKMDMATAV---------------------------------FDKLDSKNGVS 220
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + G + A+ F M+R G + ++T S++ S + L +L+ GK +HA +
Sbjct: 221 WNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVI 280
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+S + + V N L+ MY+K+G++ AR+VF+ + ++ V+W SM+ A AQ+GLG+EA+
Sbjct: 281 KSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVD-NKDLVTWNSMLTAFAQYGLGKEAV 339
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
FE M + G+ + IT++ +LTAC+HGGLV++G+RY+ MMK + ++P H+ ++V L
Sbjct: 340 SHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVAL 398
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGRAGLL A FI MP+EP WG+LL+ACR+HKN +G+ AA+ + ++PD+SG
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPP 458
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S G+W+ AA +R MK GVKK SWV+++N VH+F D HPQ + IY
Sbjct: 459 VLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIY 518
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+I +I++ G+VPD VL V++ KE L++HSEKLA+AF LI P T+RIM
Sbjct: 519 KMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIM 578
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KN+R+C DCHSA K+I K+ REIVVRD RFHHF G CSC DYW
Sbjct: 579 KNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 200/477 (41%), Gaps = 96/477 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y + + +S+N + +HA + FL NSL++ Y K S+ A+ VFD+M
Sbjct: 54 YRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMR 113
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW ++++ YA+ D+ E L+P GRFK
Sbjct: 114 RKDMVSWTSLIAGYAQN---DMPVEAIGLLPGMLK-------------GRFK-------- 149
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
P FT S+L + A D G+++H+ VK G V V ++LL+MYA+ G
Sbjct: 150 -------PNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGK 202
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MA AVFD + KN SW N++I+G+++
Sbjct: 203 MDMATAVFDKLDSKNGVSW-------------------------------NALISGFARK 231
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G AL FA ML++ + FT +S S+ A L L+ GK +HA++I++ T V
Sbjct: 232 GDGESALMTFAEMLRN-GFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFV 290
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN L+ YAK G +++D AR++FD + ++
Sbjct: 291 GNTLLDMYAKSG-----------------------SMID----------ARKVFDRVDNK 317
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V W +ML + Q GL K+AV F M + G N T +L+ S + GK+
Sbjct: 318 DLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYF 377
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG +N A + W +++ A H
Sbjct: 378 EMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 162/326 (49%), Gaps = 38/326 (11%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++L L P S ++ACA + L+ ++IHA++ + F + N+LI Y K
Sbjct: 40 DLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKC 99
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
V A+ + FD +R +D+V+WT+++ G
Sbjct: 100 RSVLDARNV---------------------------------FDQMRRKDMVSWTSLIAG 126
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QN + +A+ L M++ KPN +T +++L + + A G+QIHA A++ G
Sbjct: 127 YAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHED 186
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V +AL+ MY++ G ++ A VF+ + + VSW ++I A+ G GE A+ F ML
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALISGFARKGDGESALMTFAEML 245
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G + H TY V ++ G +EQG+ + +++K+ K+ + +++D+ ++G
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGN--TLLDMYAKSGS 303
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSA 591
+ +A + + D+V W S+L+A
Sbjct: 304 MIDARKVFDRVD-NKDLVTWNSMLTA 328
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/764 (36%), Positives = 405/764 (53%), Gaps = 108/764 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+L+HA I GL V L NSL++ Y K
Sbjct: 59 LGRLIHALITVSGLGGPVLLTNSLIDMYCKC----------------------------- 89
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
GR+D A VF DSVSW ++I Y IG +R+ V+M++ + + + S
Sbjct: 90 --GRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGS 147
Query: 151 VLASCTA--LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
L +C + + GK +H VK GL V V +LL+ YAK+GD
Sbjct: 148 ALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGD------------- 194
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-----NGYDFEALG 263
L+ A F M + +VV +N+MIAG+ Q + + EA+
Sbjct: 195 ------------------LEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 236
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M + +KP +FT +S L AC+ +E + GKQIHA I + + +GNAL+ Y
Sbjct: 237 LFFEM-QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 295
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+ G +E DG + F S DVV+WT++
Sbjct: 296 SLSGSIE-----------------------DGL----------KCFHSTPKLDVVSWTSL 322
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+VG+ QNG + + LF ++ G KP+ +T+S MLS ++LA++ G+QIHA A+++G
Sbjct: 323 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGI 382
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ + N+ I MY+K G+I++A F + VSW+ MI + AQHG +EA+ LFE
Sbjct: 383 GNFTIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMISSNAQHGCAKEAVDLFE 441
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M GI P+HIT++GVL AC+HGGLVE+G RY+ +MK H I P H A +VDLLGRA
Sbjct: 442 LMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRA 501
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L EA +FI + E D V W SLLSACRVHK D GK AE+++ +EP+ + +Y L
Sbjct: 502 GRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLY 561
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ G A IR MK GVKK G SW+++ N VH F D HP IY ++
Sbjct: 562 NIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLE 621
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQ--MLRHHSEKLAIAFGLISTPENTTLRIMKN 741
++ +EIK++ ++ + ++ D E + M+ +HSEKLA+ FG+IS P + +R+MKN
Sbjct: 622 EMLEEIKKLDYIDE--KLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKN 679
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR C CH +K +L +REI++RD RFH F+ G CSC DYW
Sbjct: 680 LRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 231/502 (46%), Gaps = 83/502 (16%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
MP R+ VSW ++I Y ++G + + +F E + +FT ++ L+ C DL G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
+ +H+ + +GL G V +TNSL++MY K G
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCG------------------------------ 90
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
R+D AR F+ E D V+WNS+IAGY + G + E L + ML+ L + + L S
Sbjct: 91 -RIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR-HGLNLNSYALGSA 148
Query: 285 LSACAN--LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
L AC + ++ GK +H ++ D VG AL+ YAK+G +E A K
Sbjct: 149 LKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATK-------- 200
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ-----NGLNKDAV 397
IF + D +VV + AM+ G+ Q + +A+
Sbjct: 201 -------------------------IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 235
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
LF M G KP+ +T S++L S++ + + GKQIHA + S + NAL+ +Y
Sbjct: 236 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 295
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
S +G+I + F+ + + VSWTS+IV Q+G E + LF +L G KPD T
Sbjct: 296 SLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 354
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA----SMVDLLGRAGLLQEAYNFI 573
+L+AC + V+ G++ + + IK +F S + + + G + A N
Sbjct: 355 SIMLSACANLAAVKSGEQIH-----AYAIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMT 408
Query: 574 ENMPLEPDVVAWGSLLSACRVH 595
PD+V+W ++S+ H
Sbjct: 409 FKETKNPDIVSWSVMISSNAQH 430
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/585 (41%), Positives = 359/585 (61%), Gaps = 45/585 (7%)
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
AVF G RL V++++ G LD AR D+M ER VV+W +MI+GYSQ E
Sbjct: 44 AVFLGTRL---------VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 94
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL +F ML+ + P+++TLA+ L++C+ + + GKQ+H+ +++T F++ VG
Sbjct: 95 ALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG---- 149
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
++LLD Y K +I ARR+FD+L +RDVV+
Sbjct: 150 -----------------------------SSLLDMYAKSENIQEARRVFDTLPERDVVSC 180
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TA++ GY Q GL+++A++LFR + EG + N+ T + +++ S LASLD+GKQ+HA LR
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+++ N+LI MYSK G + +RRVF+ + R VSW +M++ +HGLG E I
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERS-VVSWNAMLMGYGRHGLGHEVIS 299
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF+ L +KPD +T + VL+ C+HGGLV++G ++ + H+ ++DLL
Sbjct: 300 LFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 358
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GR+G L++A N IENMP E WGSLL ACRVH N+ +G++ A+KLL +EP+N+G Y
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 418
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L N+Y++ G W+D +RK M V K G SW+ + +H F + HP + I
Sbjct: 419 ILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINA 478
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
K+ +I+ +IK GFVPD + VLHDV+++ KE+ML HSEKLAI FGL++TP T+R+MK
Sbjct: 479 KIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMK 538
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLR+C DCH+ KF+ K+ +REI +RD RFH G C+C DYW
Sbjct: 539 NLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 230/508 (45%), Gaps = 108/508 (21%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
P + Y + + ++ R + G+ VHAR+I +VFL L+ Y +
Sbjct: 4 PGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRC----- 58
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
G LD A V + MP R VSWTT+I Y++ R
Sbjct: 59 --------------------------GALDDARNVLDRMPERSVVSWTTMISGYSQTERH 92
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
A+ +F++M++ +P ++T+ +VL SC+ + GK+VHS +VKT + V +SL
Sbjct: 93 VEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSL 152
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
L+MYAK + A+ VFD + ERDVV+
Sbjct: 153 LDMYAKSENIQEARRVFD-------------------------------TLPERDVVSCT 181
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
++I+GY+Q G D EAL +F + + ++ + T + ++A + L L GKQ+HA I+R
Sbjct: 182 AIISGYAQKGLDEEALDLFRQLYSE-GMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
E + N+LI D Y K G + +R
Sbjct: 241 KELPFFVALQNSLI---------------------------------DMYSKCGKLLYSR 267
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+FD++ +R VV+W AML+GY ++GL + + LF+ + +E KP++ TL A+LS S
Sbjct: 268 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGG 326
Query: 427 SLDHGKQIHASALRSGEASSLSVS---NALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+D G I + ++ E S+L + +I + ++G + A + + + W
Sbjct: 327 LVDEGLDIFDTVVK--EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWG 384
Query: 484 SMIVALAQHG---LGEEAIQLFERMLEL 508
S++ A H +GE Q ++LE+
Sbjct: 385 SLLGACRVHANVHVGELVAQ---KLLEM 409
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M G + A ++ +L G+Q+HA + + ++ + L+TMY + G
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
++ AR V + + R VSWT+MI +Q EA+ LF +ML G P+ T VLT
Sbjct: 61 LDDARNVLDRMPERS-VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 119
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF---ASMVDLLGRAGLLQEAYNFIENMPLE 579
+C+ + QG++ ++++ + SH +S++D+ ++ +QEA + +P E
Sbjct: 120 SCSGPQSIYQGKQVHSLLVKTN----FESHMFVGSSLLDMYAKSENIQEARRVFDTLP-E 174
Query: 580 PDVVAWGSLLSACRVHKNLD 599
DVV+ +++S K LD
Sbjct: 175 RDVVSCTAIISG-YAQKGLD 193
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/585 (41%), Positives = 359/585 (61%), Gaps = 45/585 (7%)
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
AVF G RL V++++ G LD AR D+M ER VV+W +MI+GYSQ E
Sbjct: 76 AVFLGTRL---------VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 126
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL +F ML+ + P+++TLA+ L++C+ + + GKQ+H+ +++T F++ VG
Sbjct: 127 ALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVG---- 181
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
++LLD Y K +I ARR+FD+L +RDVV+
Sbjct: 182 -----------------------------SSLLDMYAKSENIQEARRVFDTLPERDVVSC 212
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TA++ GY Q GL+++A++LFR + EG + N+ T + +++ S LASLD+GKQ+HA LR
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+++ N+LI MYSK G + +RRVF+ + R VSW +M++ +HGLG E I
Sbjct: 273 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERS-VVSWNAMLMGYGRHGLGHEVIS 331
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF+ L +KPD +T + VL+ C+HGGLV++G ++ + H+ ++DLL
Sbjct: 332 LFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 390
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GR+G L++A N IENMP E WGSLL ACRVH N+ +G++ A+KLL +EP+N+G Y
Sbjct: 391 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 450
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L N+Y++ G W+D +RK M V K G SW+ + +H F + HP + I
Sbjct: 451 ILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINA 510
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
K+ +I+ +IK GFVPD + VLHDV+++ KE+ML HSEKLAI FGL++TP T+R+MK
Sbjct: 511 KIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMK 570
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLR+C DCH+ KF+ K+ +REI +RD RFH G C+C DYW
Sbjct: 571 NLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 229/508 (45%), Gaps = 108/508 (21%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
P + Y + + ++ R + G+ VHAR+I +VFL L+ Y +
Sbjct: 36 PGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRC----- 90
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
G LD A V + MP R VSWTT+I Y++ R
Sbjct: 91 --------------------------GALDDARNVLDRMPERSVVSWTTMISGYSQTERH 124
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
A+ +F++M++ +P ++T+ +VL SC+ + GK+VHS +VKT + V +SL
Sbjct: 125 VEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSL 184
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
L+MYAK + A+ VFD + ERDVV+
Sbjct: 185 LDMYAKSENIQEARRVFD-------------------------------TLPERDVVSCT 213
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
++I+GY+Q G D EAL +F L ++ + T + ++A + L L GKQ+HA I+R
Sbjct: 214 AIISGYAQKGLDEEALDLF-RQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
E + N+LI D Y K G + +R
Sbjct: 273 KELPFFVALQNSLI---------------------------------DMYSKCGKLLYSR 299
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+FD++ +R VV+W AML+GY ++GL + + LF+ + +E KP++ TL A+LS S
Sbjct: 300 RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGG 358
Query: 427 SLDHGKQIHASALRSGEASSLSVS---NALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+D G I + ++ E S+L + +I + ++G + A + + + W
Sbjct: 359 LVDEGLDIFDTVVK--EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWG 416
Query: 484 SMIVALAQHG---LGEEAIQLFERMLEL 508
S++ A H +GE Q ++LE+
Sbjct: 417 SLLGACRVHANVHVGELVAQ---KLLEM 441
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M G + A ++ +L G+Q+HA + + ++ + L+TMY + G
Sbjct: 33 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
++ AR V + + R VSWT+MI +Q EA+ LF +ML G P+ T VLT
Sbjct: 93 LDDARNVLDRMPERS-VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 151
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF---ASMVDLLGRAGLLQEAYNFIENMPLE 579
+C+ + QG++ ++++ + SH +S++D+ ++ +QEA + +P E
Sbjct: 152 SCSGPQSIYQGKQVHSLLVKTN----FESHMFVGSSLLDMYAKSENIQEARRVFDTLP-E 206
Query: 580 PDVVAWGSLLSACRVHKNLD 599
DVV+ +++S K LD
Sbjct: 207 RDVVSCTAIISG-YAQKGLD 225
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/673 (38%), Positives = 376/673 (55%), Gaps = 66/673 (9%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W T+I F +AI + M + LP FT VL +C L DL G K+H+ VV
Sbjct: 80 WNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVV 139
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
K G V V SL+ +YAK G L+ A
Sbjct: 140 KGGFDCDVFVKTSLVCLYAK-------------------------------CGYLEDAHK 168
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
FD + +++VV+W ++I+GY G EA+ MF +L + +L PD FT+ LSAC L
Sbjct: 169 VFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLL-EMNLAPDSFTIVRVLSACTQLG 227
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L G+ IH C ++G V NV T+L
Sbjct: 228 DLNSGEWIH-------------------KCIMEMGMVR--------------NVFVGTSL 254
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
+D Y K G++ AR +FD + ++D+V+W AM+ GY NGL K+A++LF M RE KP+
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
YT+ +LS + L +L+ G+ + R+ + + ALI +Y+K G+++ A VF
Sbjct: 315 YTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKG 374
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ ++ V W ++I LA +G + + LF ++ +LGIKPD T++G+L CTH GLV++
Sbjct: 375 MK-EKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDE 433
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G+RY+N M + P+ H+ MVDLLGRAGLL EA+ I NMP+E + + WG+LL AC
Sbjct: 434 GRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGAC 493
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQG 652
R+H++ L ++A ++L+ +EP NSG Y L N+YS+ KW++AA +R SM ++K G
Sbjct: 494 RIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPG 553
Query: 653 FSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ 712
SW+++ VH F V D HP + IY K+ ++ ++K G+VP T VL D+EE+ KE
Sbjct: 554 CSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEH 613
Query: 713 MLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
L HSEKLAIAFGLIS +R++KNLRVC DCH AIK I + REI VRD RFH
Sbjct: 614 FLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFH 673
Query: 773 HFKKGLCSCRDYW 785
F++G CSC DYW
Sbjct: 674 CFREGSCSCNDYW 686
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 228/512 (44%), Gaps = 112/512 (21%)
Query: 13 LEFYAHLLQSNLKSRN---PFV------------GKLVHARIIKCGLHLSVFLKNSLMNF 57
+EFY + N PFV G +H ++K G VF+K SL+
Sbjct: 97 IEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCL 156
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
YAK G L+ A +VF+ +P+++ VSWT II
Sbjct: 157 YAKC-------------------------------GYLEDAHKVFDDIPDKNVVSWTAII 185
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
Y +G+F+ AI MF +++ + P FT+ VL++CT LGDL++G+ +H +++ G+
Sbjct: 186 SGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMV 245
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
V V SL++MYAK G+ A++VFDGM K+
Sbjct: 246 RNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD--------------------------- 278
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
+V+W +MI GY+ NG EA+ +F M ++ ++KPD +T+ LSACA L L+LG
Sbjct: 279 ----IVSWGAMIQGYALNGLPKEAIDLFLQMQRE-NVKPDCYTVVGVLSACARLGALELG 333
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
+ + + R EF +G ALI YAK G + A +
Sbjct: 334 EWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWE----------------------- 370
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
+F ++++D V W A++ G NG K + LF + + G KP+ T
Sbjct: 371 ----------VFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIG 420
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L + +D G++ S R + S+ ++ + +AG ++ A ++ +
Sbjct: 421 LLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 480
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ W +++ A H + A ++++EL
Sbjct: 481 ANAIVWGALLGACRIHRDTQLAELALKQLIEL 512
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 147/322 (45%), Gaps = 45/322 (13%)
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D R +F ++ ++ W M+ G N DA+E + M EG PNN+T +L
Sbjct: 61 DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L L G +IH ++ G + V +L+ +Y+K G + A +VF+ I + V
Sbjct: 121 ACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIP-DKNVV 179
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SWT++I G EAI +F R+LE+ + PD T V VL+ACT G + G+ + +
Sbjct: 180 SWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCI 239
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL------------ 588
+ ++ S+VD+ + G +++A + + MP E D+V+WG++
Sbjct: 240 MEMGMVRNVFVG-TSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMIQGYALNGLPKE 297
Query: 589 -----------------------LSACRVHKNLDLGKIAAEKLLLIEPD----NSGAYSA 621
LSAC L+LG+ + L++ + N +A
Sbjct: 298 AIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSG---LVDRNEFLYNPVLGTA 354
Query: 622 LCNLYSSCGKWEDAANIRKSMK 643
L +LY+ CG A + K MK
Sbjct: 355 LIDLYAKCGSMSRAWEVFKGMK 376
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 274/786 (34%), Positives = 410/786 (52%), Gaps = 106/786 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P P + P A +L+S + VH + GLH +F+ +L++ YAK S
Sbjct: 125 PQPNNYTFPFVLKACSALLDLRS-----ARAVHCHAARAGLHADLFVSTALVDVYAKCAS 179
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+A VF MP RD V+W ++ Y
Sbjct: 180 FRHAATVFRR-------------------------------MPARDVVAWNAMLAGYALH 208
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT----GLSGC 179
G++ + I + M QD P T+ ++L G LS G+ VH++ V+
Sbjct: 209 GKYSDTIACLLLM-QDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDG 267
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V V +LL+MYAK G + A VF+ M ++N
Sbjct: 268 VLVGTALLDMYAKCGHLVYASRVFEAMAVRNE---------------------------- 299
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
VTW++++ G+ G EA +F +ML ++AS L ACANL L LGKQ
Sbjct: 300 ---VTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQ 356
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+HA + ++ GN+L+S YA K
Sbjct: 357 LHALLAKSGLHTDLTAGNSLLSMYA---------------------------------KA 383
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
G I A +FD + +D V+++A++ GY QNG +A +FR M +P+ T+ +++
Sbjct: 384 GLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLI 443
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S LA+L HGK H S + G AS S+ NALI MY+K G I+ +R++F+++ R +
Sbjct: 444 PACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPAR-DI 502
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSW +MI HGLG+EA LF M +PD +T++ +++AC+H GLV +G+R+++M
Sbjct: 503 VSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHM 562
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M + + I P H+ MVDLL R G L EAY FI+ MPL+ DV WG+LL ACRVHKN+D
Sbjct: 563 MAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNID 622
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LGK + + + P+ +G + L N++S+ G++++AA +R K G KK+ G SW++I
Sbjct: 623 LGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEIN 682
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+H F D H Q IY ++ I +I ++G+ DT+ VL DVEE+ KE+ L +HSE
Sbjct: 683 GSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSE 742
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFG+++ E+ T+ + KNLRVC DCH+ IK++ + R I+VRDA RFHHFK G C
Sbjct: 743 KLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQC 802
Query: 780 SCRDYW 785
SC D+W
Sbjct: 803 SCGDFW 808
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 12/279 (4%)
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
GD+ AR +FD + + + A++ Y G R P+PNNYT +L
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S+L L + +H A R+G + L VS AL+ +Y+K + A VF + R +
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR-DV 195
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ---RY 536
V+W +M+ A HG + I M + P+ T V +L G + QG+ Y
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA---C- 592
++H K +++D+ + G L A E M + +V W +L+ C
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT-WSALVGGFVLCG 313
Query: 593 RVHKNLDLGK-IAAEKLLLIEPDN-SGAYSALCNLYSSC 629
R+ + L K + A+ L + P + + A A NL C
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLC 352
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/703 (35%), Positives = 389/703 (55%), Gaps = 67/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++ Y K G +D A ++F+ + +RD VSW ++I G +A+ FV+M+ +V
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ + +A+C +G LS G+ +H VK S V N+LL+MY+K G+
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGN------- 704
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ A F++M ++ VV+W S+IA Y + G +A+
Sbjct: 705 ------------------------LNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAI 740
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + + PD +++ S L ACA L G+ +H YI + PV NAL
Sbjct: 741 RLFYEM-ESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNAL--- 796
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+D Y K G + A +F + +D+V+W
Sbjct: 797 ------------------------------MDMYAKCGSMEEAYLVFSQIPVKDIVSWNT 826
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY +N L +A++LF M +E +P+ T++ +L SLA+L+ G+ IH LR+G
Sbjct: 827 MIGGYSKNSLPNEALKLFAEMQKE-SRPDGITMACLLPACGSLAALEIGRGIHGCILRNG 885
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+S L V+NALI MY K G++ AR +F++I ++ ++WT MI HGLG EAI F
Sbjct: 886 YSSELHVANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISGCGMHGLGNEAIATF 944
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M GIKPD IT+ +L AC+H GL+ +G ++N M + ++P H+A MVDLL R
Sbjct: 945 QKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLAR 1004
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
G L +AYN IE MP++PD WG+LL CR+H +++L + AE + +EPDN+G Y L
Sbjct: 1005 TGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLL 1064
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ KWE+ +R+ + G+KK+ G SW+++Q K F D HPQ +I++ +
Sbjct: 1065 ANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLL 1124
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ ++K G P L + + KE L HSEKLA+AFG+++ P T+R+ KNL
Sbjct: 1125 NNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNL 1184
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC+DCH KF+ K REI++RD+ RFHHFK G CSCRD+W
Sbjct: 1185 RVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 161/607 (26%), Positives = 278/607 (45%), Gaps = 107/607 (17%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L Y+ +LQ + + GK+VH+ I G+ + L L+ Y ++ +++FD
Sbjct: 451 LNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFD 510
Query: 73 E-MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
+ + WN ++S YAK IG ++ +I
Sbjct: 511 HILSDNKVFLWNLMMSEYAK-------------------------------IGDYRESIY 539
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
+F +M + + +T + +L LG + K++H V K G V NSL+ Y
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYF 599
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K SG +D A FD++ +RDVV+WNSMI+G
Sbjct: 600 K-------------------------------SGEVDSAHKLFDELGDRDVVSWNSMISG 628
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
NG+ AL F ML + D TL ++++ACAN+ L LG+ +H
Sbjct: 629 CVMNGFSHSALEFFVQMLI-LRVGVDLATLVNSVAACANVGSLSLGRALH---------- 677
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
G + +C+++ V+ TLLD Y K G++ A + F+
Sbjct: 678 ----GQGVKACFSR-------------------EVMFNNTLLDMYSKCGNLNDAIQAFEK 714
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ + VV+WT+++ Y + GL DA+ LF M +G P+ Y+++++L + SLD G
Sbjct: 715 MGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKG 774
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ +H ++ A L VSNAL+ MY+K G++ A VF+ I + + VSW +MI ++
Sbjct: 775 RDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGGYSK 833
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTP 550
+ L EA++LF M + +PD IT +L AC +E G+ + +++N + +
Sbjct: 834 NSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGY---SSE 889
Query: 551 SHFA-SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH--KNLDLGKIAAEK 607
H A +++D+ + G L A + +P E D++ W ++S C +H N + +
Sbjct: 890 LHVANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISGCGMHGLGNEAIATFQKMR 948
Query: 608 LLLIEPD 614
+ I+PD
Sbjct: 949 IAGIKPD 955
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 224/492 (45%), Gaps = 100/492 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H + +K V N+L++ Y+K +++ A + F++M KT+ SW ++++AY
Sbjct: 672 LGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYV 731
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
++G D +AIR+F EM V P +++TS
Sbjct: 732 REGLYD-------------------------------DAIRLFYEMESKGVSPDVYSMTS 760
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL +C L G+ VH+++ K ++ C+ V+N+L++MYAK G A VF + +K+
Sbjct: 761 VLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKD 820
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ V+WN+MI GYS+N EAL +FA M K
Sbjct: 821 I-------------------------------VSWNTMIGGYSKNSLPNEALKLFAEMQK 849
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+S +PD T+A L AC +L L++G+ IH I+R + + V NALI
Sbjct: 850 ES--RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALI---------- 897
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
D Y+K G + AR +FD + ++D++ WT M+ G +
Sbjct: 898 -----------------------DMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMH 934
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSV 449
GL +A+ F+ M G KP+ T +++L S L+ G S + L
Sbjct: 935 GLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEH 994
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
++ + ++ GN++ A + + + + W +++ H E A ++ E + EL
Sbjct: 995 YACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFEL- 1053
Query: 510 IKPDHITYVGVL 521
+PD+ Y +L
Sbjct: 1054 -EPDNAGYYVLL 1064
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 4/199 (2%)
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
++AVEL R + N Y S++L + + L GK +H+ +G + L
Sbjct: 435 RNAVELLRMSQKSELDLNAY--SSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKL 492
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ MY G + RR+F+ I + W M+ A+ G E+I LF++M +LGI +
Sbjct: 493 VFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGN 552
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
T+ +L G V + +R + + + + S++ ++G + A+
Sbjct: 553 SYTFSCILKCFATLGRVGECKRIHGCVYKL-GFGSYNTVVNSLIATYFKSGEVDSAHKLF 611
Query: 574 ENMPLEPDVVAWGSLLSAC 592
+ + + DVV+W S++S C
Sbjct: 612 DELG-DRDVVSWNSMISGC 629
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/704 (35%), Positives = 403/704 (57%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQV 141
N+++ Y+K G L A +F++ ++ VSW TII Y++ G F+ + EM +++V
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKV 397
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+ TV +VL +C+ L + K++H + + G V N+ + YAK A+
Sbjct: 398 RVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAER 457
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VF GM K VS +WN++I ++QNG+ ++
Sbjct: 458 VFCGMEGKTVS-------------------------------SWNALIGAHAQNGFPGKS 486
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M+ DS + PD+FT+ S L ACA L+ L+ GK+IH +++R
Sbjct: 487 LDLFLVMM-DSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRN-------------- 531
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
G+E+ + I GIS +++ YI+ + + IFD + ++ +V W
Sbjct: 532 ------GLELDEFI----GISLMSL---------YIQCSSMLLGKLIFDKMENKSLVCWN 572
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
M+ G+ QN L +A++ FR M+ G KP ++ +L S +++L GK++H+ AL++
Sbjct: 573 VMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKA 632
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ V+ ALI MY+K G + ++ +F+ ++ + E V W +I HG G +AI+L
Sbjct: 633 HLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV-WNVIIAGYGIHGHGLKAIEL 691
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FE M G +PD T++GVL AC H GLV +G +Y M+N++ +KP H+A +VD+LG
Sbjct: 692 FELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLG 751
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L EA + MP EPD W SLLS+CR + +L++G+ ++KLL +EP+ + Y
Sbjct: 752 RAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVL 811
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY+ GKW++ +R+ MK G+ K G SW++I V+ F V D + I
Sbjct: 812 LSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQT 871
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
K+ +I ++G+ PDT+ VLH++EE+ K ++L+ HSEKLAI+FGL++T + TTLR+ KN
Sbjct: 872 WIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKN 931
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C DCH+AIK + K+V R+I+VRD RFHHFK GLC+C D+W
Sbjct: 932 LRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 163/659 (24%), Positives = 273/659 (41%), Gaps = 135/659 (20%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL++ +N VG+ VHA + L V L ++ Y+ S S ++ VFD K
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
L +N +LS Y++ F++AI +F+E++
Sbjct: 158 DLFLYNALLSGYSRNAL-------------------------------FRDAISLFLELL 186
Query: 138 QDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
L P FT+ V +C + D+ G+ VH+ +K G V N+L+ MY K G
Sbjct: 187 SATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFV 246
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A VF+ MR R++V+WNS++ S+NG
Sbjct: 247 ESAVKVFETMR-------------------------------NRNLVSWNSVMYACSENG 275
Query: 257 YDFEALGMFANML--KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
E G+F +L ++ L PD T+ + + ACA + ++++G +H +
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVT 335
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N+L+ Y+K G + A+ + + +G NV+++ T++ GY K GD R +F
Sbjct: 336 VNNSLVDMYSKCGYLGEARALFDMNGGK--NVVSWNTIIWGYSKEGDF---RGVF----- 385
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQ 433
EL + M RE + N T+ +L S L K+
Sbjct: 386 -----------------------ELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKE 422
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IH A R G V+NA + Y+K +++ A RVF + + + SW ++I A AQ+G
Sbjct: 423 IHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVS-SWNALIGAHAQNG 481
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHK------I 546
+++ LF M++ G+ PD T +L AC + G+ + M++N + I
Sbjct: 482 FPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGI 541
Query: 547 KPTPSHFASMVDLLGR------------------AGLLQ-----EAYNFIENM---PLEP 580
+ LLG+ G Q EA + M ++P
Sbjct: 542 SLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601
Query: 581 DVVAWGSLLSACRVHKNLDLGK-IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
+A +L AC L LGK + + L +++ AL ++Y+ CG E + NI
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNI 660
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 44/204 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH+ +K L F+ +L++ YAK + ++ +FD + K WN I++ Y
Sbjct: 621 LGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYG 680
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYN------------------------- 121
G A E+F LM N+ DS ++ +++ N
Sbjct: 681 IHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKL 740
Query: 122 -----------EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
G+ A+++ EM + P +S+L+SC GDL G++V
Sbjct: 741 EHYACVVDMLGRAGQLTEALKLVNEMPDE---PDSGIWSSLLSSCRNYGDLEIGEEVSKK 797
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVG 194
+++ + N L N+YA +G
Sbjct: 798 LLELEPNKAENYV-LLSNLYAGLG 820
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/749 (35%), Positives = 403/749 (53%), Gaps = 99/749 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH + K G VF+ SL++ Y++ + A KVF +MPVK + SWN ++S + +
Sbjct: 140 GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A V N M + V TI TV S+
Sbjct: 200 NGNAAGALGVLNRMKG-EGVKMDTI------------------------------TVASI 228
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C D+ G +H V+K GL V V+N+L+NMY+K G A+ VFD M ++++
Sbjct: 229 LPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDL 288
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S WNS+IA Y QN AL F M +
Sbjct: 289 VS-------------------------------WNSIIAAYEQNNDPSTALRFFKGM-QL 316
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYAKVGGVE 330
++PD T+ S S + L ++ + I ++IR E D +GNAL++ YAK+G +
Sbjct: 317 GGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMN 376
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A + +Q L +D ++W ++ GY QN
Sbjct: 377 CAHTVFDQ---------------------------------LPRKDTISWNTLVTGYTQN 403
Query: 391 GLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
GL +A++ + M PN T +++ S + +L G +IHA +++ + V
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+ LI +Y K G + A +F I R +V W ++I +L HG GEEA+QLF+ ML
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAER 522
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+K DHIT+V +L+AC+H GLV++GQ+ +++M+ + IKP+ H+ MVDLLGRAG L++A
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKA 582
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y + NMP++PD WG+LLSAC+++ N +LG +A+++LL ++ +N G Y L N+Y++
Sbjct: 583 YELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANT 642
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KWE +R + G++KT G+S V + +K VF + HP+ IY ++ + ++
Sbjct: 643 EKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKM 702
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K +G+VPD + V D+EED KEQ+L HSE+LAIAFG+ISTP + +RI KNLRVC DCH
Sbjct: 703 KSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCH 762
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGL 778
+A K+I ++ +REIVVRD+ RFHHFK G+
Sbjct: 763 NATKYISRISEREIVVRDSNRFHHFKDGI 791
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 159/628 (25%), Positives = 282/628 (44%), Gaps = 113/628 (17%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +HA ++ G ++ L L+N Y IS ++ FD + K + SWN+I+SAY +
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G+ A N ++F + P +T +L
Sbjct: 99 GKYHEAMNCVN---------------------------QLFSMCGGGHLRPDFYTFPPIL 131
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C +L D GKKVH V K G V V SL+++Y++ G +A VF M +K+V
Sbjct: 132 KACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SW N+MI+G+ QNG ALG+ N +K
Sbjct: 189 SW-------------------------------NAMISGFCQNGNAAGALGVL-NRMKGE 216
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+K D T+AS L CA + + G IH ++++ D+ V NALI+ Y+K G ++ A
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
Q +FD + RD+V+W +++ YEQN
Sbjct: 277 Q---------------------------------MVFDQMEVRDLVSWNSIIAAYEQNND 303
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EASSLSVSN 451
A+ F+ M G +P+ T+ ++ S+ S L+ + I +R + + N
Sbjct: 304 PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGN 363
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GI 510
AL+ MY+K G +N A VF+ + R++T+SW +++ Q+GL EAI + M E
Sbjct: 364 ALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDT 422
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
P+ T+V ++ A +H G ++QG + + ++KN + + ++DL G+ G L++A
Sbjct: 423 IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDA 480
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVH----------KNLDLGKIAAEKLLLIEPDNSGAY 619
+ +P + V W +++++ +H K++ ++ A+ + + ++ ++
Sbjct: 481 MSLFYEIPRDTS-VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 620 SALCNLYSSCGK-WEDAANIRKSMKYVG 646
S L + C + I+ S+K+ G
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYG 567
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 205/494 (41%), Gaps = 97/494 (19%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A +L +S + G L+H ++K GL VF+ N+L+N Y+K + A+ VFD+M V
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ L SWN+I++AY + N D A+R F M
Sbjct: 286 RDLVSWNSIIAAYEQ---------------NNDP----------------STALRFFKGM 314
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGD 195
+ P TV S+ + + L D + + FV++ L V + N+L+NMYAK+G
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGY 374
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A VFD + K+ SW N+++ GY+QN
Sbjct: 375 MNCAHTVFDQLPRKDTISW-------------------------------NTLVTGYTQN 403
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA+ + M + P++ T S + A +++ L+ G +IHA +I+ V
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
LI Y K G +E A + ++ RD
Sbjct: 464 ATCLIDLYGKCGRLEDAMSL--------------------------------FYEIPRDT 491
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
V W A++ +G ++A++LF+ M+ E K ++ T ++LS S +D G++
Sbjct: 492 S-VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCF 550
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+ G SL ++ + +AG + A + + + + W +++ A +G
Sbjct: 551 DIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610
Query: 495 GEEAIQLFERMLEL 508
E +R+LE+
Sbjct: 611 AELGTLASDRLLEV 624
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+S +++ K++HA L G++ ++ +S LI +Y G+I+ +R F+ IH ++ SW
Sbjct: 30 NSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH-KKNIFSW 88
Query: 483 TSMIVALAQHGLGEEAI----QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
S+I A + G EA+ QLF ++PD T+ +L AC LV+ G++ +
Sbjct: 89 NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV--SLVD-GKKVHC 145
Query: 539 MMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
V K+ F AS+V L R G+L A+ +MP++ DV +W +++S
Sbjct: 146 C---VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISG 196
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 278/764 (36%), Positives = 405/764 (53%), Gaps = 108/764 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+L+HA I GL V L NSL++ Y K
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKC----------------------------- 168
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
GR+D A VF DSVSW ++I Y IG +R+ V+M++ + + + S
Sbjct: 169 --GRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGS 226
Query: 151 VLASCTA--LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
L +C + + GK +H VK GL V V +LL+ YAK+GD
Sbjct: 227 ALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGD------------- 273
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-----NGYDFEALG 263
L+ A F M + +VV +N+MIAG+ Q + + EA+
Sbjct: 274 ------------------LEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 315
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M + +KP +FT +S L AC+ +E + GKQIHA I + + +GNAL+ Y
Sbjct: 316 LFFEM-QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 374
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+ G +E DG + F S DVV+WT++
Sbjct: 375 SLSGSIE-----------------------DGL----------KCFHSTPKLDVVSWTSL 401
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+VG+ QNG + + LF ++ G KP+ +T+S MLS ++LA++ G+QIHA A+++G
Sbjct: 402 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGI 461
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ + N+ I MY+K G+I++A F + VSW+ MI + AQHG +EA+ LFE
Sbjct: 462 GNFTIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMISSNAQHGCAKEAVDLFE 520
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M GI P+HIT++GVL AC+HGGLVE+G RY+ +MK H I P H A +VDLLGRA
Sbjct: 521 LMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRA 580
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L EA +FI + E D V W SLLSACRVHK D GK AE+++ +EP+ + +Y L
Sbjct: 581 GRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLY 640
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ G A IR MK GVKK G SW+++ N VH F D HP IY ++
Sbjct: 641 NIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLE 700
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQ--MLRHHSEKLAIAFGLISTPENTTLRIMKN 741
++ +EIK++ ++ + ++ D E + M+ +HSEKLA+ FG+IS P + +R+MKN
Sbjct: 701 EMLEEIKKLDYIDE--KLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKN 758
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR C CH +K +L +REI++RD RFH F+ G CSC DYW
Sbjct: 759 LRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 167/605 (27%), Positives = 269/605 (44%), Gaps = 116/605 (19%)
Query: 4 PNPPSLISPLE--FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
P P L PL+ Y L+Q + ++ + GKL H +IK +FL N+L+ Y K
Sbjct: 8 PQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKC 67
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
G D+A ++F+ MP R+ VSW ++I Y
Sbjct: 68 -------------------------------GETDVAKKLFDRMPKRNVVSWNSLISGYT 96
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
++G + + +F E + +FT ++ L+ C DL G+ +H+ + +GL G V
Sbjct: 97 QMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVL 156
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+TNSL++MY K G R+D AR F+ E D
Sbjct: 157 LTNSLIDMYCKCG-------------------------------RIDWARLVFESADELD 185
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN--LEKLKLGKQ 299
V+WNS+IAGY + G + E L + ML+ L + + L S L AC + ++ GK
Sbjct: 186 SVSWNSLIAGYVRIGSNDEMLRLLVKMLR-HGLNLNSYALGSALKACGSNFSSSIECGKM 244
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H ++ D VG AL+ YAK+G +E A K
Sbjct: 245 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATK------------------------- 279
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQ-----NGLNKDAVELFRSMVREGPKPNNYT 414
IF + D +VV + AM+ G+ Q + +A+ LF M G KP+ +T
Sbjct: 280 --------IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFT 331
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
S++L S++ + + GKQIHA + S + NAL+ +YS +G+I + F+
Sbjct: 332 FSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 391
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
+ + VSWTS+IV Q+G E + LF +L G KPD T +L+AC + V+ G+
Sbjct: 392 -KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGE 450
Query: 535 RYYNMMKNVHKIKPTPSHFA----SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+ + + IK +F S + + + G + A N PD+V+W ++S
Sbjct: 451 QIH-----AYAIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMTFKETKNPDIVSWSVMIS 504
Query: 591 ACRVH 595
+ H
Sbjct: 505 SNAQH 509
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/763 (34%), Positives = 406/763 (53%), Gaps = 97/763 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L+ S+N G+++H+ IIKCG + F+ L++ Y+K
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC----------------- 362
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G A VF + D V W+ +I ++ G+ + +I++F M
Sbjct: 363 --------------GLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRL 408
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
LP Q+T+ S+L++ T G+L G+ +H+ V K G V V+N+L+ MY K G
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG---- 464
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
V DG +L ++ M++RD+++WN+ ++G G
Sbjct: 465 --CVHDGTKL-------------------------YESMVDRDLISWNAYLSGLHDCGMY 497
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
L +F +ML++ + P+ +T S L +C+ L + G+Q+HA+II+ + D V A
Sbjct: 498 DRPLTIFYHMLEEGFI-PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTA 556
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI YAK Y++ D+ F+ L RD+
Sbjct: 557 LIDMYAKCM----------------------------YLEDADVA-----FNRLSVRDLF 583
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
WT ++ Y Q + A+ FR M +EG KPN +TL+ LS SSLASL+ G+Q+H+
Sbjct: 584 TWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMV 643
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+SG S + V +AL+ MY+K G + A +F + R++T++W ++I AQ+G G +A
Sbjct: 644 FKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQGNKA 702
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ F ML+ GI PD +T+ G+L+AC+H GLVE+G+ ++N M I PT H A MVD
Sbjct: 703 LTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVD 762
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+LGR G E +FI+ M L + + W ++L A ++H NL LG+ AA KL ++P+ +
Sbjct: 763 ILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESS 822
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N++++ G+W+D +R M GVKK G SWV+ +VH F D+ HPQ I
Sbjct: 823 YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEI 882
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+ K+ ++ E+ + +VP T VLH+V E K++ LR HSE+LA+ F LIST +RI
Sbjct: 883 HLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRI 942
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
KNLR+C DCH +K I + ++EIVVRD RFHHFK G CSC
Sbjct: 943 FKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 174/677 (25%), Positives = 299/677 (44%), Gaps = 146/677 (21%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
L++Y+ +L+ R+ V K +H I+K ++ L SL+N YAK +YA+ V
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
+MP +RD VSWT +I G ++I +
Sbjct: 172 KMP-------------------------------DRDVVSWTALIQGLVAEGFANDSIYL 200
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F EM + ++P +FT+ + L +C+ L GK++H+ K GL + V ++L+++YAK
Sbjct: 201 FQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAK 260
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSM 248
G+ +A +F GM +N +WNV+++ + G + F M+E DV T ++
Sbjct: 261 CGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 249 IAG-----------------------------------YSQNGYDFEALGMFANMLK--- 270
+ G YS+ G +A+G+F + K
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380
Query: 271 ----------------DSSLK-----------PDKFTLASTLSACANLEKLKLGKQIHAY 303
+ S+K P+++T+ S LSA N L+ G+ IHA
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHAC 440
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ + F+ V NAL++ Y K G V K+
Sbjct: 441 VWKYGFETDVAVSNALVTMYMKNGCVHDGTKL---------------------------- 472
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
++S+ DRD+++W A L G G+ + +F M+ EG PN YT ++L S
Sbjct: 473 -----YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
L + +G+Q+HA +++ + V ALI MY+K + A FN + R + +WT
Sbjct: 528 CLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWT 586
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+I AQ GE+A+ F +M + G+KP+ T G L+ C+ +E GQ+ ++M V
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSM---V 643
Query: 544 HKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
K F +++VD+ + G ++EA E + + D +AW +++ C +N
Sbjct: 644 FKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTII--CGYAQNGQGN 700
Query: 602 K-IAAEKLLL---IEPD 614
K + A +++L I PD
Sbjct: 701 KALTAFRMMLDEGISPD 717
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 222/522 (42%), Gaps = 102/522 (19%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+S+L C + L K +H +VK ++ ++ SL+N+YAK A
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYA--------- 166
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
RL LA+ M +RDVV+W ++I G G+ +++ +F M
Sbjct: 167 -----------------RLVLAK-----MPDRDVVSWTALIQGLVAEGFANDSIYLFQEM 204
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ + P++FTLA+ L AC+ L LGKQ+HA + VG+AL+ YA
Sbjct: 205 -QNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA---- 259
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
K G+I A ++F + +++ V W +L GY
Sbjct: 260 -----------------------------KCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q G ++LF SM+ K N +TL+ +L ++ +L G+ IH+ ++ G +
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ L+ MYSK G A VF I + + V W+++I L Q G EE+I+LF M
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFHLMRLG 409
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYN--------------------MMKNVHKIKP 548
P+ T +L+A T+ G ++ GQ + MKN +
Sbjct: 410 DTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKN-GCVHD 468
Query: 549 TPSHFASMVDL-----------LGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRV 594
+ SMVD L G+ +M E P++ + S+L +C
Sbjct: 469 GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528
Query: 595 HKNLDLGKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWEDA 635
++ G+ ++ + DN+ +AL ++Y+ C EDA
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 150/322 (46%), Gaps = 41/322 (12%)
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
SS K K+ +S L CA+ L + K IH I++ D P + +S
Sbjct: 107 SSKKKLKY-YSSMLRECASKRSLGVAKAIHGLIVK---DVINPDSHLWVS---------- 152
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
L++ Y K AR + + DRDVV+WTA++ G G
Sbjct: 153 --------------------LVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEG 192
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
D++ LF+ M EG PN +TL+ L S +LD GKQ+HA A + G L V +
Sbjct: 193 FANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGS 252
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ +Y+K G I A ++F + Q V+W ++ AQ G ++LF M+EL +K
Sbjct: 253 ALVDLYAKCGEIELASKMF-IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEA 569
+ T VL C + ++QGQ +++ + K + F +VD+ + GL +A
Sbjct: 312 CNEFTLTTVLKGCANSKNLKQGQVIHSL---IIKCGYEGNEFIGCGLVDMYSKCGLAIDA 368
Query: 570 YNFIENMPLEPDVVAWGSLLSA 591
+ + +PD+V W +L++
Sbjct: 369 IGVFKTIK-KPDIVVWSALITC 389
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/783 (34%), Positives = 421/783 (53%), Gaps = 97/783 (12%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-SVFLKNSLMNFYAKTE 62
P P + + A LLQS ++ + G+L+HAR++ G S FL N L+ Y+
Sbjct: 12 PPAPDAATTVHL-ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCA 70
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
++ A ++F MP R++VSWTT++ ++
Sbjct: 71 DLASALRLF-------------------------------AAMPRRNAVSWTTLVSGLSQ 99
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
+A+ F M + V PT+F ++S + ALG G ++H V+ G + V
Sbjct: 100 NLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFV 159
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
++L +MY+K G A VFD M K+ +W
Sbjct: 160 ASNLADMYSKCGLLSEACRVFDQMPQKDAVAW---------------------------- 191
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
+MI GY++NG A+ F +M ++ + D+ S LSA L+ L K IH
Sbjct: 192 ---TAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHC 248
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ + F+ V NALI YAK VE A ++++ + NV++ T+++DGYI+ +
Sbjct: 249 CVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW-NVVSGTSMIDGYIETDCV 307
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A I+ LR R+G +PN +T S+M+
Sbjct: 308 EEALVIYVELR-------------------------------RQGVEPNEFTFSSMIKGC 336
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ A L+ G Q+HA +++ V + L+ MY K G I+ + ++FN I +R + ++W
Sbjct: 337 AMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAW 395
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
++I AQHG G EAIQ F+RM+ GI+P+HI +V +LTAC+H GLV++G +Y+ MK
Sbjct: 396 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKE 455
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
H I+P H++ ++D GRAG L EAY FI MP++P+ W SLL ACR+ + +LG+
Sbjct: 456 AHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGE 515
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AA+ L+ +EP N+G + +L +Y+S G+WED +RK M+ +KK GFSWV K
Sbjct: 516 VAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKT 575
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
HVFG EDW HPQ+ IY K+ ++ IKE G++PDT+ + ++E+ KE++LR+HSE++A
Sbjct: 576 HVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIA 635
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
+AF LIS P + + KNLR+C DCH+A KFICK+ R+I+VRD +RFHHF G CSC
Sbjct: 636 VAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCG 695
Query: 783 DYW 785
DYW
Sbjct: 696 DYW 698
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/715 (34%), Positives = 392/715 (54%), Gaps = 74/715 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQV 141
N ++ Y K G LDLACEVF M +R+ VSWT ++V + G +R+ EM +
Sbjct: 43 NNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEA 102
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P ++T+++ L +C +GD +AG +H V+ G V +SL+ +Y+K G A+
Sbjct: 103 APNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARR 162
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFDG L + + TWN+M++GY+ G+ +A
Sbjct: 163 VFDGAGLGS------------------------------GIATWNAMVSGYAHAGHGRDA 192
Query: 262 LGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
L +F M + + +PD+FT AS L AC+ L + G Q+HA + + F
Sbjct: 193 LLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS------- 245
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
N I L+D Y+K + A ++F+ L ++V+ W
Sbjct: 246 ------------------------NAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQW 281
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TA++VG+ Q G +A+ELFR R G +P+++ LS+++ V + A ++ G+Q+H ++
Sbjct: 282 TAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK 341
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+ +S N+++ MY K G + A R+F + VSWT+M+ L +HGLG EA+
Sbjct: 342 DPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMR-APNVVSWTTMVNGLGKHGLGREAVA 400
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LFE M G++PD +TY+ +L+AC+H GLV++ +RY++ ++ ++P H+A MVDLL
Sbjct: 401 LFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLL 460
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L+EA + I MP+EP V W +LLSACRVHK++ +G+ A + LL ++ DN Y
Sbjct: 461 GRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYV 520
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF---GVEDWLHPQRDA 677
L N+ + G+W + +R +M+ G+KK G SWV++ +VH F G E+ HPQ
Sbjct: 521 TLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGD 580
Query: 678 IYNKMAKIWDEIKE-MGFVPDTAS-VLHDVEEDVKEQMLRHHSEKLAIAF-----GLIST 730
I + + ++E +G+ D A LHDV+E+ + + LR HSE+LA+ G+
Sbjct: 581 IRRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGG 640
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCH K + +V R +VVRDA RFH F+ G CSC+DYW
Sbjct: 641 GHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 25/189 (13%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
++ +L S+ +SL G Q+H + + G S + N LI MY K G ++ A VF +
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACT-------- 525
R VSWT+++V +HG ++L M P+ T L AC
Sbjct: 67 DRN-VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAG 125
Query: 526 ---HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
HG V G + ++++ + S+V + + G + +A + L +
Sbjct: 126 VGIHGLCVRAGYQEHDVVAS------------SLVLVYSKGGRIGDARRVFDGAGLGSGI 173
Query: 583 VAWGSLLSA 591
W +++S
Sbjct: 174 ATWNAMVSG 182
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 264/696 (37%), Positives = 391/696 (56%), Gaps = 80/696 (11%)
Query: 101 VFNLMP--NRD-SVSWTTIIVTYNEI------GRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+FNLM +R S S +++ T+ I GR + A+ +EMV ++
Sbjct: 1 MFNLMRLIHRSFSSSPNSVLQTFRPISQLCSNGRLQEAL---LEMVMLGPEIGFHCYDAL 57
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L G++VH+ ++KT + LL Y K
Sbjct: 58 LNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC---------------- 101
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
L+ AR D+M E++VV+W +MI+ YSQ G+ EAL +FA M++
Sbjct: 102 ---------------LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMR- 145
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S KP++FT A+ L++C L LGKQIH I++ +D+ VG
Sbjct: 146 SDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVG--------------- 190
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
++LLD Y K G I AR IF+ L +RDVV+ TA++ GY Q G
Sbjct: 191 ------------------SSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLG 232
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L+++A+E+F+ + EG +PN T +++L+ S LA LDHGKQ H LR + N
Sbjct: 233 LDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 292
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-ELGI 510
+LI MYSK GN++ A+R+F+ + R +SW +M+V ++HGLG E ++LF M E +
Sbjct: 293 SLIDMYSKCGNLSYAQRLFDNMPERT-AISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 351
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
KPD +T + VL+ C+HG + + G Y+ M+ + IKP H+ +VD+LGRAG + EA
Sbjct: 352 KPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEA 411
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ FI+ MP +P GSLL ACRVH ++D+G+ +L+ IEP+N+G Y L NLY+S
Sbjct: 412 FEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASA 471
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+WED N+R M V K G SW+Q + +H F D HP+R+ + KM +I ++
Sbjct: 472 GRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM 531
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K+ G+VPD + VL+DV+E+ KE+ML HSEKLA+ FGLI+T E +R+ KNLR+C DCH
Sbjct: 532 KQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCH 591
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K K+ +RE+ +RD RFH KG+CSC DYW
Sbjct: 592 NFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 204/454 (44%), Gaps = 99/454 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL + L R G+ VHA +IK + +L+ L+ FY K + + A+KV DEM
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM- 112
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
P ++ VSWT +I Y++ G A+ +F E
Sbjct: 113 ------------------------------PEKNVVSWTAMISRYSQTGHSSEALSVFAE 142
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ P +FT +VL SC L+ GK++H +VK + V +SLL+MYAK G
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG- 201
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+++ AR F+ + ERDVV+ ++IAGY+Q
Sbjct: 202 ------------------------------QIEEAREIFECLPERDVVSCTAIIAGYAQL 231
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL MF L+ ++P+ T AS L+A + L L GKQ H +++R E +
Sbjct: 232 GLDEEALEMFQR-LQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 290
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI Y+K G + AQ R+FD++ +R
Sbjct: 291 QNSLIDMYSKCGNLSYAQ---------------------------------RLFDNMPER 317
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
++W AMLVGY ++GL ++ +ELFR M E KP+ TL A+LS S D G I
Sbjct: 318 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSI 377
Query: 435 HAS--ALRSGEASSLSVSNALITMYSKAGNINAA 466
+ A G ++ M +AG I+ A
Sbjct: 378 YDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEA 411
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 263/701 (37%), Positives = 397/701 (56%), Gaps = 76/701 (10%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFT 147
Y R+D A +VF+ +P+ D+V W T++ + A+ F MV D V P T
Sbjct: 159 YFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFARMVCDGSVRPDATT 214
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ SVL + + D++ G+ VHSF K GL+ +V L+++Y+K GD
Sbjct: 215 LASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGD------------ 262
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++ AR FD M + D+V +N++I+GYS NG ++ +F
Sbjct: 263 -------------------VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTE 303
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
++ L P+ TL + + + L + +H +++++ F A PV A+
Sbjct: 304 LMT-LGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAI-------- 354
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
TTL + ++ D+ AR+ FD++ ++ + +W AM+ GY
Sbjct: 355 ----------------------TTL---HCRLNDMESARKAFDTMPEKTMESWNAMISGY 389
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QNGL + AV LF MV+ +PN T+S+ LS + L +L GK +H ++
Sbjct: 390 AQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNV 449
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V ALI MY+K G+I+ ARR+FN + + VSW +MI HG G EA++L++ ML+
Sbjct: 450 YVMTALIDMYAKCGSISEARRIFNTMD-NKNVVSWNAMIAGYGLHGQGAEALKLYKDMLD 508
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+ P T++ VL AC+HGGLVE+G + + M + + I P H MVDLLGRAG L+
Sbjct: 509 AHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLK 568
Query: 568 EAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
EA+ I P + P V WG+LL AC VHK+ DL K+A++KL ++P+NSG Y L N
Sbjct: 569 EAFELISEFPKSAVGPGV--WGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSN 626
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
L++S ++ +AA +R+ K + KT G++ ++I NK HVF D HPQ +AIY+ + K
Sbjct: 627 LHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEK 686
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++ E G+ P+T + L+DVEE+ KE M++ HSEKLAIAFGL+ST T +RI+KNLRV
Sbjct: 687 LTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRV 746
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+A KFI K+ R IVVRDA+RFHHF+ G+CSC DYW
Sbjct: 747 CLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 202/447 (45%), Gaps = 83/447 (18%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S Y+K G ++ A +F++M D V++ +I Y+ G +++ +F E++ + P
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T+ +++ + G + +H FV+K+G + V+ ++ ++ ++ D A+ FD
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFD 372
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M K + SWN ++S + +G ++A A F+QM++ +V
Sbjct: 373 TMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNV---------------------- 410
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
+P+ T++STLSACA L L LGK +H I + + V ALI YA
Sbjct: 411 ----------RPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYA 460
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G + ARRIF+++ +++VV+W AM+
Sbjct: 461 KCGSI---------------------------------SEARRIFNTMDNKNVVSWNAMI 487
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-----AL 439
GY +G +A++L++ M+ P + T ++L S ++ G ++ S A+
Sbjct: 488 AGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAI 547
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLI-HWRQETVS---WTSMIVALAQHGLG 495
G + ++ + +AG + A F LI + + V W +++ A H
Sbjct: 548 NPG----IEHCTCMVDLLGRAGQLKEA---FELISEFPKSAVGPGVWGALLGACMVHKDS 600
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLT 522
+ A +++ EL P++ Y +L+
Sbjct: 601 DLAKLASQKLFEL--DPENSGYYVLLS 625
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 67/267 (25%)
Query: 28 NPF----VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWN 83
+PF + + +H ++K G + + ++ + + + A+K FD MP KT+ SWN
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
++S YA+ G ++ A+ +F +MV+ V P
Sbjct: 384 AMISGYAQNGLTEM-------------------------------AVALFEQMVKLNVRP 412
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
T++S L++C LG LS GK +H + + L V V +L++MYAK G A+ +F
Sbjct: 413 NPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIF 472
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+ M KNV S WN+MIAGY +G EAL
Sbjct: 473 NTMDNKNVVS-------------------------------WNAMIAGYGLHGQGAEALK 501
Query: 264 MFANMLKDSSLKPDKFTLASTLSACAN 290
++ +ML D+ L P T S L AC++
Sbjct: 502 LYKDML-DAHLLPTSATFLSVLYACSH 527
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 43/188 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP ++ S L A L +L GK +H I + L +V++ +L++ YAK S
Sbjct: 412 PNPITISSTLSACAQLGALSL-------GKWLHRIITEEDLEPNVYVMTALIDMYAKCGS 464
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
IS A+++F+ M K + SWN +++ Y
Sbjct: 465 ISEARRIFNTMDNKNVVSWNAMIAGYGLH------------------------------- 493
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-----HSFVVKTGLSG 178
G+ A++++ +M+ +LPT T SVL +C+ G + G KV + + G+
Sbjct: 494 GQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEH 553
Query: 179 CVNVTNSL 186
C + + L
Sbjct: 554 CTCMVDLL 561
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V++AL +Y ++ AR+VF+ + +TV W +++ L+ G EA++ F RM+
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVP-SPDTVLWNTLLAGLS----GSEAVESFARMVCD 205
Query: 509 G-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G ++PD T VL A V G+ ++ + + ++ L + G ++
Sbjct: 206 GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKC-GLAEHEHVLTGLISLYSKCGDVE 264
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVH 595
A + M +PD+VA+ +L+S V+
Sbjct: 265 SARCLFDMME-KPDLVAYNALISGYSVN 291
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/602 (40%), Positives = 370/602 (61%), Gaps = 10/602 (1%)
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
+ K+G + A+ V G++ N +V+++ SG LD A FD++ + +NS+I
Sbjct: 92 FIKLGQQAHAQIVLHGLQ-PNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSII 150
Query: 250 AGYSQNGYDFEA---LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
Y+++G L +A M L D FTL L +CA+L ++ +G+ +H +R
Sbjct: 151 RAYTRHGXXXXXXXXLEAYARM-HFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLR 209
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ VG +LI Y K G + A+K+ ++ + ++ ++ L+ GY+K G+IG A
Sbjct: 210 VGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR--DMASWNALIAGYMKEGEIGVAE 267
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSS 424
+F+ + R++V+WTAM+ GY QNG + A+ LF M+++G KPN T+ ++L +
Sbjct: 268 DLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ 327
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWT 483
A+L+ G++IH A G + SV AL MY+K ++ AR F++I + ++W
Sbjct: 328 SAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWN 387
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI A A HG G EA+ +FE ML G++PD +T++G+L+ C+H GL++ G ++N M +
Sbjct: 388 TMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTI 447
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
H ++P H+A +VDLLGRAG L EA I MP++ WG+LL+ACR H+NL++ ++
Sbjct: 448 HSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAEL 507
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
AA +L ++EPDNSG Y L NLY+ G WE+ +R +KY G+KK+ G SW++I K H
Sbjct: 508 AARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSH 567
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAI 723
+F D HPQ IY + + ++IK G++PDT+ VLHD+ E+ KE L HSEKLAI
Sbjct: 568 LFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAI 627
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
AFGL++T LR+ KNLR+C DCH+A KFI K+ +REI+VRD RFH FK G CSC D
Sbjct: 628 AFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGD 687
Query: 784 YW 785
YW
Sbjct: 688 YW 689
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 149/592 (25%), Positives = 267/592 (45%), Gaps = 94/592 (15%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFV--GKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
P+P S YA + Q +R+ F+ G+ HA+I+ GL + FL ++ YA +
Sbjct: 75 PHPSS-------YAPIFQ--FLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASS 125
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ A VFD + + +N+I+ AY + G
Sbjct: 126 GDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXX----------------------- 162
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ + M +L FT+ VL SC L + G+ VH ++ GL G
Sbjct: 163 -----XXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFY 217
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V SL++MY K G A+ +FD M +++++SWN +++ ++ G + +A F++M R+
Sbjct: 218 VGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRN 277
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSS-LKPDKFTLASTLSACANLEKLKLGKQI 300
+V+W +MI+GY+QNG+ +ALG+F ML+D S +KP+ T+ S L ACA L+ G++I
Sbjct: 278 IVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRI 337
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H + V AL YAK +VE
Sbjct: 338 HDFANGIGLHLNSSVQTALAGMYAK------CYSLVE----------------------- 368
Query: 361 DIGPARRIFDSL--RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
AR FD + ++++AW M+ Y +G +AV +F +M+R G +P+ T +
Sbjct: 369 ----ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGL 424
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWR 476
LS S +D G H + + + + V + ++ + +AG + A+ + + + +
Sbjct: 425 LSGCSHSGLIDAGLN-HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQ 483
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQR 535
W +++ A H E +L R L + ++PD+ YV + G+ E+ ++
Sbjct: 484 AGPSVWGALLAACRSH-RNLEIAELAARRLFV-LEPDNSGNYVLLSNLYAEAGMWEEVKK 541
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLL----------QEAYNFIENMP 577
++K +K +P S +++ G++ L +E Y F+E +P
Sbjct: 542 LRALLK-YQGMKKSPG--CSWIEINGKSHLFMGADKSHPQAKEIYKFLEALP 590
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/701 (36%), Positives = 399/701 (56%), Gaps = 65/701 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AY+ G +D A +VF+ + +D VSWT ++ Y E ++++ +F +M P
Sbjct: 145 LIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPN 204
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT+++ L SC L GK VH +K + V +LL +Y K
Sbjct: 205 NFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTK------------ 252
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
SG + A+ F++M + D++ W+ MI+ Y+Q+ EAL +
Sbjct: 253 -------------------SGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALEL 293
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + S + P+ FT AS L ACA+L L LG QIH+ +++ D+ V NAL
Sbjct: 294 FCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNAL----- 348
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+D Y K G+I + ++F +++ VAW ++
Sbjct: 349 ----------------------------MDVYAKCGEIENSVKLFTGSTEKNEVAWNTII 380
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
VGY Q G + A+ LF +M+ +P T S++L S+SL +L+ G+QIH+ +++
Sbjct: 381 VGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYN 440
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
V+N+LI MY+K G I+ AR F+ + +Q+ VSW ++I + HGLG EA+ LF+
Sbjct: 441 KDSVVANSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIHGLGMEALNLFDM 499
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + KP+ +T+VGVL+AC++ GL+++G+ ++ M + I+P H+ MV LLGR+G
Sbjct: 500 MQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSG 559
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
EA I +P +P V+ W +LL AC +HKNLDLGK+ A+++L +EP + + L N
Sbjct: 560 QFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSN 619
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y++ +W++ A +RK+MK VKK G SWV+ Q VH F V D HP I+ +
Sbjct: 620 MYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEW 679
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
++ + ++ G+VPD + VL DVE+D KE++L HSE+LA+AFGLI P ++RI+KNLR+
Sbjct: 680 LYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRI 739
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+ IK + K+V REIV+RD RFHHF++G+CSC DYW
Sbjct: 740 CVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 226/514 (43%), Gaps = 107/514 (20%)
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
D +AGK +H ++K G S L+++A+ N++++
Sbjct: 18 DPNAGKSLHCHILKHGAS---------LDLFAQ----------------------NILLN 46
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++H G L+ A FD+M + V++ ++ G+S++ + F+ L + ++F
Sbjct: 47 TYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRS-HQFQRARRLLLRLFREGYEVNQF 105
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
+ L +++ +HAY+ + A VG ALI
Sbjct: 106 VFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALI------------------- 146
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
D Y G++ AR++FD + +D+V+WT M+ Y +N ++D++ L
Sbjct: 147 --------------DAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLL 192
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M G +PNN+T+SA L + L + GK +H AL+ L V AL+ +Y+K
Sbjct: 193 FCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTK 252
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYV 518
+G I A++ F + + + + W+ MI AQ +EA++LF RM + + P++ T+
Sbjct: 253 SGEIAEAQQFFEEMP-KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFA 311
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS--MVDLLGRAGLL---------- 566
VL AC L+ G + ++ V K+ + F S ++D+ + G +
Sbjct: 312 SVLQACASLVLLNLGNQIHSC---VLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGS 368
Query: 567 ---------------------QEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLGK 602
++A N NM ++P V + S+L A L+ G+
Sbjct: 369 TEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGR 428
Query: 603 -IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
I + + + +S ++L ++Y+ CG+ +DA
Sbjct: 429 QIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDA 462
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 70/296 (23%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PN + S L+ A L+ NL G +H+ ++K GL +VF+ N+LM+ YAK
Sbjct: 304 VPNNFTFASVLQACASLVLLNL-------GNQIHSCVLKVGLDSNVFVSNALMDVYAKC- 355
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
G ++ + ++F ++ V+W TIIV Y +
Sbjct: 356 ------------------------------GEIENSVKLFTGSTEKNEVAWNTIIVGYVQ 385
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
+G + A+ +F M+ + PT+ T +SVL + +L L G+++HS +KT + V
Sbjct: 386 LGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVV 445
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
NSL++MYAK G A+ FD +M ++D
Sbjct: 446 ANSLIDMYAKCGRIDDARLTFD-------------------------------KMDKQDE 474
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
V+WN++I GYS +G EAL +F +M++ S+ KP+K T LSAC+N L G+
Sbjct: 475 VSWNALICGYSIHGLGMEALNLF-DMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR 529
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 41/598 (6%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G +AR FD+ +E++VV +N MI Y N EAL +F ML + PD +T
Sbjct: 85 GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS-CAFNPDHYTFPCV 143
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L AC+ L+ L++G Q+H I++ D +GNAL++ Y K G + A+K+++Q + Y
Sbjct: 144 LKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQ--MPYR 201
Query: 345 NVIAFTTLLDGYIKIGDIGPARRI------------------------------------ 368
+V+++ +++ GY + G A I
Sbjct: 202 DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHN 261
Query: 369 -FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F+ + +++++W M+ Y N + +AV LF M G KP+ T++++L L++
Sbjct: 262 MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSA 321
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L G+++H + +L + NAL+ MY+K G + AR VF+ + R + VSWTSM+
Sbjct: 322 LFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMS 380
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A + G G +A+ LF +ML+ G PD I +V VL+AC+H GL++QG+ Y+ MM + I
Sbjct: 381 AYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIV 440
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P HFA MVDL GRAG ++EAY+FI+ MP+EP+ WG+LLSACRVH +D+G +AA+
Sbjct: 441 PRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADL 500
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L + P SG Y L N+Y+ G W+D N+R +MK +G+KK G S V++ +VH F
Sbjct: 501 LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLA 560
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HPQ IY ++ + ++KE+G++P T S LHDVE + KE L HSEKLAI F +
Sbjct: 561 GDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAI 620
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++T + T +RI KNLRVC DCH AIK I K+V R I+VRD RFHHF G+CSC DYW
Sbjct: 621 LNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 196/446 (43%), Gaps = 72/446 (16%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AY+ QG +A +F+ ++ V + +I +Y + A+ +F M+ P
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C+ L +L G +VH +VK GL + + N+L+ MY K G A+ V D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLA---------------------------------- 230
M ++V SWN +V+ + SG+ D A
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 231 ---RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
F++M ++++++WN MIA Y N EA+ +F M ++ +KPD T+AS L A
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQM-EECGMKPDAVTIASLLPA 315
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C +L L LG+++H YI + + NAL+ YAK G +E
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLE----------------- 358
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
AR +FD +R RDVV+WT+M+ Y ++G DAV LF M+ G
Sbjct: 359 ----------------EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P++ ++LS S LD G+ + G + ++ ++ +AG + A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQH 492
+ W +++ A H
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVH 488
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 158/351 (45%), Gaps = 74/351 (21%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
N VG VH I+K GL ++F+ N+L+ Y K + A+KV D+MP + + SWN++++
Sbjct: 152 NLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211
Query: 88 AYAKQGRLDLACEV-------------------------------------FNLMPNRDS 110
YA+ G+ D A E+ F M ++
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNL 271
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
+SW +I Y A+ +F++M + + P T+ S+L +C L L G+++H +
Sbjct: 272 ISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKY 331
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
+ K L + + N+LL+MYAK G A+ VFD MRL++V SW
Sbjct: 332 IEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW---------------- 375
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
SM++ Y ++G ++A+ +FA ML DS PD S LSAC++
Sbjct: 376 ---------------TSMMSAYGRSGQGYDAVALFAKML-DSGQNPDSIAFVSVLSACSH 419
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGN---ALISCYAKVGGVEIAQKIVEQ 338
L G+ H + + TE P ++ + + G VE A ++Q
Sbjct: 420 TGLLDQGR--HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQ 468
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 150/305 (49%), Gaps = 26/305 (8%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y G+ AR IFD +++VV + M+ Y N L +A+ +F+ M+ P+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+YT +L S L +L G Q+H + ++ G ++L + NAL+ MY K G + AR+V +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ +R + VSW SM+ AQ G ++A+++ + M L + D T + + L E
Sbjct: 197 QMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL-E 254
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF---IENMPLEPDVVAWGSL 588
Q +NM + + K + M+ + + EA + +E ++PD V SL
Sbjct: 255 NVQYIHNMFERM--TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 589 LSAC----------RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
L AC R+HK ++ G + LL+E +AL ++Y+ CG E+A ++
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLQPN--LLLE-------NALLDMYAKCGCLEEARDV 363
Query: 639 RKSMK 643
M+
Sbjct: 364 FDKMR 368
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/598 (39%), Positives = 351/598 (58%), Gaps = 41/598 (6%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G +AR FD+ +E++VV +N MI Y N EAL +F ML + PD +T
Sbjct: 85 GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS-CAFNPDHYTFPCV 143
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L AC+ L+ L++G Q+H I++ D +GNAL++ Y K G + A+K+++Q + Y
Sbjct: 144 LKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQ--MPYR 201
Query: 345 NVIAFTTLLDGYIKIGDIGPARRI------------------------------------ 368
+V+++ +++ GY + G A I
Sbjct: 202 DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHN 261
Query: 369 -FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F+ + +++++W M+ Y N + +AV LF M G KP+ T++++L L++
Sbjct: 262 MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSA 321
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L G+++H + +L + NAL+ MY+K G + AR VF+ + R + VSWTSM+
Sbjct: 322 LFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMS 380
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A + G G +A+ LF +ML+ G PD I +V VL+AC+H GL++QG+ Y+ MM + I
Sbjct: 381 AYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIV 440
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P HFA MVDL GRAG ++EAY+FI+ MP+EP+ WG+LLSACRVH +D+G +AA+
Sbjct: 441 PRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADL 500
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L + P SG Y L N+Y+ G W+D N+R +MK +G+KK G S V++ +VH F
Sbjct: 501 LFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLA 560
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HPQ IY ++ + ++KE+G++P T S LHDVE + KE L HSEKLAI F +
Sbjct: 561 GDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAI 620
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++T + T +RI KNLRVC DCH AIK I K+V R I+VRD RFHHF G+CSC DYW
Sbjct: 621 LNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 196/446 (43%), Gaps = 72/446 (16%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AY+ QG +A +F+ ++ V + +I +Y + A+ +F M+ P
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C+ L +L G +VH +VK GL + + N+L+ MY K G A+ V D
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLA---------------------------------- 230
M ++V SWN +V+ + SG+ D A
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENV 256
Query: 231 ---RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
F++M ++++++WN MIA Y N EA+ +F M ++ +KPD T+AS L A
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQM-EECGMKPDAVTIASLLPA 315
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C +L L LG+++H YI + + NAL+ YAK G +E
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLE----------------- 358
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
AR +FD +R RDVV+WT+M+ Y ++G DAV LF M+ G
Sbjct: 359 ----------------EARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P++ ++LS S LD G+ + G + ++ ++ +AG + A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQH 492
+ W +++ A H
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVH 488
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 158/351 (45%), Gaps = 74/351 (21%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
N VG VH I+K GL ++F+ N+L+ Y K + A+KV D+MP + + SWN++++
Sbjct: 152 NLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211
Query: 88 AYAKQGRLDLACEV-------------------------------------FNLMPNRDS 110
YA+ G+ D A E+ F M ++
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNL 271
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
+SW +I Y A+ +F++M + + P T+ S+L +C L L G+++H +
Sbjct: 272 ISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKY 331
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
+ K L + + N+LL+MYAK G A+ VFD MRL++V SW
Sbjct: 332 IEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSW---------------- 375
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
SM++ Y ++G ++A+ +FA ML DS PD S LSAC++
Sbjct: 376 ---------------TSMMSAYGRSGQGYDAVALFAKML-DSGQNPDSIAFVSVLSACSH 419
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGN---ALISCYAKVGGVEIAQKIVEQ 338
L G+ H + + TE P ++ + + G VE A ++Q
Sbjct: 420 TGLLDQGR--HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQ 468
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 150/305 (49%), Gaps = 26/305 (8%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y G+ AR IFD +++VV + M+ Y N L +A+ +F+ M+ P+
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+YT +L S L +L G Q+H + ++ G ++L + NAL+ MY K G + AR+V +
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ +R + VSW SM+ AQ G ++A+++ + M L + D T + + L E
Sbjct: 197 QMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSL-E 254
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF---IENMPLEPDVVAWGSL 588
Q +NM + + K + M+ + + EA + +E ++PD V SL
Sbjct: 255 NVQYIHNMFERM--TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 589 LSAC----------RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
L AC R+HK ++ G + LL+E +AL ++Y+ CG E+A ++
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLRPN--LLLE-------NALLDMYAKCGCLEEARDV 363
Query: 639 RKSMK 643
M+
Sbjct: 364 FDKMR 368
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/759 (33%), Positives = 406/759 (53%), Gaps = 104/759 (13%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+L+HA I++ L + L +L+ YA+ + A+K FDEM KTL +WN +++ Y+
Sbjct: 77 GQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ---DQVLPTQFT 147
+ G + A++++ +MV + + P T
Sbjct: 137 RN-------------------------------GDHRGALKIYQDMVSKSPEGMKPDAIT 165
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S L +CT +GD+S G+++ + V +G + V N+L+NMY+K G A+ VFD ++
Sbjct: 166 FSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++V +W N+MI+GY++ G +AL +F
Sbjct: 226 NRDVIAW-------------------------------NTMISGYAKQGAATQALELFQR 254
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + KP+ T L+AC NLE L+ G+ IH + +++ +GN L++ Y K
Sbjct: 255 MGPNDP-KPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCS 313
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ AR++F+ +R RDV+ W ++V Y
Sbjct: 314 --------------------------------SSLEEARQVFERMRTRDVITWNILIVAY 341
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q G KDA+++F+ M E PN TLS +LS + L + GK +HA + +
Sbjct: 342 VQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADV 401
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ N+L+ MY++ G+++ VF I + VSW+++I A AQHG ++ F +L+
Sbjct: 402 VLENSLMNMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G+ D +T V L+AC+HGG++++G + + M H + P HF MVDLL RAG L+
Sbjct: 461 EGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLE 520
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSALCNLY 626
A N I +MP PD VAW SLLS C++H + A+KL +E D + L N+Y
Sbjct: 521 AAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVY 580
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ G+W+D +RK+ +K G S+++I + VH F D HP+ + I ++ ++
Sbjct: 581 AEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLS 637
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
++K+ G+VPD VLH+V+E+ KEQML +HSEKLAIA+GLISTP T L I+KNLR C
Sbjct: 638 KQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACV 697
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A KFI ++V R+IVVRD+TRFHHF+ G CSC+DYW
Sbjct: 698 DCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 243/511 (47%), Gaps = 71/511 (13%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y K G + A VF+ + + +SVSWT I+ + G ++ A+ + MV + + P
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ C++ DL G+ +H+ +++T L + + +L+ MYA+ D +A+ FD M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K + +W N++IAGYS+NG AL ++ +
Sbjct: 122 KKTLVTW-------------------------------NALIAGYSRNGDHRGALKIYQD 150
Query: 268 MLKDS--SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M+ S +KPD T +S L AC + + G++I A + + + + V NALI+ Y+K
Sbjct: 151 MVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSK 210
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A+K+ ++ + +VIA+ T++ GY K
Sbjct: 211 CGSLESARKVFDR--LKNRDVIAWNTMISGYAK--------------------------- 241
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
G A+ELF+ M PKPN T +L+ ++L L+ G+ IH G S
Sbjct: 242 ----QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYES 297
Query: 446 SLSVSNALITMYSK-AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
L + N L+ MY+K + ++ AR+VF + R + ++W +IVA Q+G ++A+ +F++
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERMRTR-DVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + P+ IT VL+AC G QG+ + ++ + + K S++++ R G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS-GRCKADVVLENSLMNMYNRCG 415
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
L + + + +V+W +L++A H
Sbjct: 416 SLDDTVGVFAAIR-DKSLVSWSTLIAAYAQH 445
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 230/481 (47%), Gaps = 101/481 (20%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + A A F + + V+W ++A +++NG+ EALG + M+ + L+PD
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGAMFVVA 64
Query: 285 LSACANLEKLKLGKQIHAYIIRT---EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+ C++ + LK G+ +HA I+ T EFD +G ALI+ YA+ +E+
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETRLLEFDII--LGTALITMYARCRDLEL---------- 112
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
AR+ FD + + +V W A++ GY +NG ++ A+++++
Sbjct: 113 -----------------------ARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 402 SMVR---EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
MV EG KP+ T S+ L + + + G++I A + SG AS V NALI MYS
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYS 209
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K G++ +AR+VF+ + R + ++W +MI A+ G +A++LF+RM KP+ +T++
Sbjct: 210 KCGSLESARKVFDRLKNR-DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 519 GVLTACTHGGLVEQGQRYY---------------NMMKNVHKIKPTPSHFASMV------ 557
G+LTACT+ +EQG+ + N++ N++ + A V
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRT 328
Query: 558 -DLLG---------RAGLLQEAYNFIENMPLE---PDVVAWGSLLSAC----------RV 594
D++ + G ++A + + M LE P+ + ++LSAC V
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H + G+ A+ +L +NS L N+Y+ CG +D + + ++ S
Sbjct: 389 HALIASGRCKADVVL----ENS-----LMNMYNRCGSLDDTVGV-----FAAIRDKSLVS 434
Query: 655 W 655
W
Sbjct: 435 W 435
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 265/781 (33%), Positives = 419/781 (53%), Gaps = 100/781 (12%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S + P EF ++ ++ + SR+ G+ VHA +++ G VF N+L++ Y+K
Sbjct: 196 SGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKL----- 250
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
G + +A VF +P D VSW I G
Sbjct: 251 --------------------------GDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHD 284
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVL--ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
++A+ + ++M ++P FT++S+L + G + G+++H F++K +
Sbjct: 285 QHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGV 344
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L++MYAK G LD AR F+ + +D++
Sbjct: 345 ALVDMYAKYG-------------------------------LLDDARKVFEWIPRKDLLL 373
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
WN++I+G S G E+L +F M K+ S ++ TLA+ L + A+LE + Q+HA
Sbjct: 374 WNALISGCSHGGCHGESLSLFCRMRKEGS-DINRTTLAAVLKSTASLEAISDTTQVHALA 432
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+ F + V N LI Y K + A K+
Sbjct: 433 EKIGFLSDSHVVNGLIDSYWKCNCLRYANKV----------------------------- 463
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
F+ +++A+T+M+ Q +DA++LF M+R+G +P+ + LS++L+ +S
Sbjct: 464 ----FEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACAS 519
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L++ + GKQ+HA ++ + + NAL+ Y+K G+I A F+ + + VSW++
Sbjct: 520 LSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSA 578
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI LAQHG G+ A+ +F RM++ I P+HIT VL AC H GLV++ + Y++ MK +
Sbjct: 579 MIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMF 638
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
I T H++ M+DLLGRAG L +A + +MP E + WG+LL+A RVH++ +LGK+A
Sbjct: 639 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLA 698
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AEKL ++EP+ SG + L N Y+S G W++ A +RK MK VKK SWV+++++VH
Sbjct: 699 AEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHT 758
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V D HP+ IY K+ ++ D + + G+VP+ LHDV++ KE +L HHSE+LA+A
Sbjct: 759 FIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVA 818
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
F LISTP +R+ KNLR+C DCH A KFI K+V REI++RD RFHHF G CSC DY
Sbjct: 819 FALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDY 878
Query: 785 W 785
W
Sbjct: 879 W 879
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 196/722 (27%), Positives = 312/722 (43%), Gaps = 158/722 (21%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
P ISPL L +++ F+G +HA ++K GL L F +N L++FY+K
Sbjct: 4 PESISPL------LTRYAATQSLFLGAHIHAHLLKSGL-LHAF-RNHLLSFYSKCRLPGS 55
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR------------------ 108
A++VFDE P SW+++++AY+ A F M R
Sbjct: 56 ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPD 115
Query: 109 ------------------DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ---------- 140
D ++ Y G A R+F E +D+
Sbjct: 116 AGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175
Query: 141 ----------------------VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG 178
V P +F + V+ +CT DL AG+KVH+ VV+TG
Sbjct: 176 AFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDK 235
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
V N+L++MY+K+GD MA VF + +V SW
Sbjct: 236 DVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSW------------------------ 271
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS--ACANLEKLKL 296
N+ I+G +G+D AL + M K S L P+ FTL+S L A A L
Sbjct: 272 -------NAFISGCVLHGHDQHALELLLQM-KSSGLVPNVFTLSSILKACAGAGAGAFAL 323
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
G+QIH ++I+ D+ +G AL+ YAK G LLD
Sbjct: 324 GRQIHGFMIKACADSDDYIGVALVDMYAKYG------------------------LLD-- 357
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
AR++F+ + +D++ W A++ G G + +++ LF M +EG N TL+
Sbjct: 358 -------DARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLA 410
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
A+L ++SL ++ Q+HA A + G S V N LI Y K + A +VF H
Sbjct: 411 AVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEE-HSS 469
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+++TSMI AL+Q GE+AI+LF ML G++PD +L AC EQG++
Sbjct: 470 DNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 529
Query: 537 YNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+ ++ K K FA ++V + G +++A +P + VV+W +++
Sbjct: 530 H---AHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSAMIGGLAQ 585
Query: 595 H----KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV-GVKK 649
H + LD+ + ++ I P++ S LC + G ++A SMK + G+ +
Sbjct: 586 HGHGKRALDVFRRMVDE--RIAPNHITLTSVLCAC-NHAGLVDEAKGYFSSMKEMFGIDR 642
Query: 650 TQ 651
T+
Sbjct: 643 TE 644
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 265/708 (37%), Positives = 403/708 (56%), Gaps = 72/708 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK G +D AC VF LM RD +SW TII ++ G + A+ + M Q+ +
Sbjct: 422 NGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIG 481
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P+ F S L+SC LG L+AG+++H VK GL +V+N+L+ MY + G
Sbjct: 482 PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECG-------- 533
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EA 261
+ W + F+ M DVV+WNS++ + + E+
Sbjct: 534 ------RMSECWEI-----------------FNSMSAHDVVSWNSIMGVMASSQAPITES 570
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F+NM+K S L P+K T + L+A L L+LGKQIH+ +++ V NAL+S
Sbjct: 571 VQVFSNMMK-SGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMS 629
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAW 380
CYAK G D+ R+F + R D ++W
Sbjct: 630 CYAKSG---------------------------------DVDSCERLFSRMSGRRDAISW 656
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+M+ GY NG ++A++ M+ ++ T S +L+ +S+A+L+ G ++HA LR
Sbjct: 657 NSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLR 716
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
S S + V +AL+ MYSK G I+ A +VF+ + + E SW SMI A+HGLG +A++
Sbjct: 717 SHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNE-FSWNSMISGYARHGLGRKALE 775
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
+FE M E G PDH+T+V VL+AC+H GLVE+G Y+ +M++ + I P H++ ++DLL
Sbjct: 776 IFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMED-YGILPRIEHYSCVIDLL 834
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN---LDLGKIAAEKLLLIEPDNSG 617
GRAG L + +++ MP++P+ + W ++L AC+ K+ +DLG A+ LL +EP N
Sbjct: 835 GRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPV 894
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y +++ G+WED A R +MK VKK G SWV + + VH F D HP
Sbjct: 895 NYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKE 954
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ + +I+ G+VP T VLHD+EE+ KE++LR+HSEKLA+AF L + +R
Sbjct: 955 IYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIR 1014
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IMKNLRVC DCH+A ++I ++V R+I++RD+ RFHHFK G CSC DYW
Sbjct: 1015 IMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 171/737 (23%), Positives = 301/737 (40%), Gaps = 174/737 (23%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-- 140
N ++++YAK RLD A VF+ MP R++VSWT +I + G ++A +F M+++
Sbjct: 104 NHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPG 163
Query: 141 VLPTQFTVTSVLASCTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSL------------ 186
PT FT SVL +C G L +VH V KT + V N+L
Sbjct: 164 CRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPP 223
Query: 187 ---------------------LNMYAKVGDEMMAKAVFDGMR------------------ 207
+++YAK GD + +F M+
Sbjct: 224 ILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSL 283
Query: 208 ---------------------LKNVSSWNV-----VVSLHIHSGRLDLARAQFDQMIERD 241
LK+ S ++ +VS G LD A+ + + ER+
Sbjct: 284 ITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERN 343
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL----EKLKLG 297
VT N +IAG + + A +F +++ D + + LSA A + L+ G
Sbjct: 344 AVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV--LLSAIAEFSTAEQGLRKG 401
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
+++HA+++R I +KI +G L++ Y
Sbjct: 402 REVHAHVLRAG---------------------HIYRKIAVSNG-----------LVNMYA 429
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
K G I A R+F + RD ++W ++ +QNG + A+ + M + P+N+ +
Sbjct: 430 KCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAIS 489
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
LS + L L G+Q+H A++ G SVSNAL+ MY + G ++ +FN +
Sbjct: 490 GLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMS-AH 548
Query: 478 ETVSWTSMIVALA-QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ VSW S++ +A E++Q+F M++ G+ P+ +T+V L A T ++E G++
Sbjct: 549 DVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQI 608
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS------ 590
+++M H + + +++ ++G + M D ++W S++S
Sbjct: 609 HSVMLK-HGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNG 667
Query: 591 -----------------------------ACRVHKNLDLG-KIAAEKLLLIEPDNSGAYS 620
AC L+ G ++ A L + S
Sbjct: 668 HLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVES 727
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
AL ++YS CG+ + A+ + SM + FSW + + R +
Sbjct: 728 ALVDMYSKCGRIDYASKVFHSM-----SQKNEFSWNSMISGY-----------ARHGLGR 771
Query: 681 KMAKIWDEIKEMGFVPD 697
K +I++E++E G PD
Sbjct: 772 KALEIFEEMQESGESPD 788
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 64/261 (24%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP-VKTLCSWNTILSAY 89
+GK +H+ ++K G+ + N+LM+ YAK+ + +++F M + SWN+++S Y
Sbjct: 604 LGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGY 663
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G L A + LM M E + D T +
Sbjct: 664 IYNGHLQEAMDCVCLM--------------------------MHSEQMMDHC-----TFS 692
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL +C ++ L G ++H+F +++ L V V ++L++MY+K G A VF M K
Sbjct: 693 IVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQK 752
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
N SW NSMI+GY+++G +AL +F M
Sbjct: 753 NEFSW-------------------------------NSMISGYARHGLGRKALEIFEEM- 780
Query: 270 KDSSLKPDKFTLASTLSACAN 290
++S PD T S LSAC++
Sbjct: 781 QESGESPDHVTFVSVLSACSH 801
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA ++ L V ++++L++ Y+K I YA KVF M K SWN+++S YA+
Sbjct: 707 GMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYAR 766
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
G A E+F M + D V++ +++ + G + + F M +LP
Sbjct: 767 HGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILP 822
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 285/828 (34%), Positives = 428/828 (51%), Gaps = 143/828 (17%)
Query: 31 VGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+GK +HA ++CG H + + SL++ Y +W+++L
Sbjct: 73 LGKQLHALCVRCGHDHGDIRVGTSLVDMYM---------------------NWHSVL--- 108
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
GR +VF M R+ V+WT+++ Y + G + + +F M + V P FT +
Sbjct: 109 --DGR-----KVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFS 161
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG--------------- 194
SVL+ + G + G+ VH+ +K G V V NSL+NMYAK G
Sbjct: 162 SVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR 221
Query: 195 -----DEMMAKAVFDGMRLKNV---------------SSWNVVVSLHIHSGRLDLAR--- 231
+ +MA V +G L+ + S+++ V++L + L LAR
Sbjct: 222 DMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLH 281
Query: 232 -------------------------AQFDQMIE--------RDVVTWNSMIAGYSQNGYD 258
Q D+ ++ ++VV+W +MI G QNG
Sbjct: 282 SSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDI 341
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
A +F+ M +D + P+ T ++ L+ + + QIHA +I+T ++ T VG A
Sbjct: 342 PLAAALFSRMREDG-VAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTA 396
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+ Y+K+ E A IF + +DVV
Sbjct: 397 LMVSYSKLCSTE---------------------------------EALSIFKMIDQKDVV 423
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHAS 437
+W+AML Y Q G A F M G KPN +T+S+ + + +S A +D G+Q HA
Sbjct: 424 SWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAI 483
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+++ +L VS+AL++MY++ G+I A+ VF ++ +SW SM+ AQHG ++
Sbjct: 484 SIKHRCHDALCVSSALVSMYARKGSIENAQCVFER-QTDRDLLSWNSMLSGYAQHGYSQK 542
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A+ +F +M GI D +T++ V+ C H GLVE+GQ+Y+++M + I PT H+A MV
Sbjct: 543 ALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMV 602
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DL RAG L E + IE MP W +LL ACRVHKN++LGK+AAEKLL +EP +S
Sbjct: 603 DLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSA 662
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L N+YS+ GKW++ +RK M V+K G SW+QI+NKVH F D HP +
Sbjct: 663 TYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQ 722
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ + ++K+ G+ PDT+ V HDV ED KE ML HSE+LA+AFGLI+TP L
Sbjct: 723 IYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLH 782
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLRV D H+ +K + ++ DREIV+RD RFHHFK G+CSC D+W
Sbjct: 783 IFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 204/441 (46%), Gaps = 72/441 (16%)
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C ++ D GK++H+ V+ G G + V SL++MY M +V DG
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMY------MNWHSVLDG---- 110
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
R F+ M++R+VVTW S++ GY Q G + + +F M
Sbjct: 111 ---------------------RKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRM- 148
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + P+ FT +S LS A+ + LG+ +HA I+ +T V N+L++ YAK G V
Sbjct: 149 RAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLV 208
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E AR +F + RD+V+W ++ G
Sbjct: 209 E---------------------------------EARVVFCRMETRDMVSWNTLMAGLVL 235
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
NG + +A++LF T S ++++ ++L L +Q+H+S L+ G S +V
Sbjct: 236 NGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNV 295
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
AL+ Y+KAG ++ A VF L+ Q VSWT+MI Q+G A LF RM E G
Sbjct: 296 MTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDG 355
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+ P+ +TY +LT Q + ++K ++ PT +++ + +EA
Sbjct: 356 VAPNDLTYSTILTVSEAS---FPPQIHAQVIKTNYECTPTVG--TALMVSYSKLCSTEEA 410
Query: 570 YNFIENMPLEPDVVAWGSLLS 590
+ I M + DVV+W ++L+
Sbjct: 411 LS-IFKMIDQKDVVSWSAMLT 430
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 153/342 (44%), Gaps = 42/342 (12%)
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG- 313
G+ +AL F + + L + C ++ LGKQ+HA +R D
Sbjct: 32 QGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDI 91
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VG +L+ Y V +K+ E G+ NV+ +T+LL GYI
Sbjct: 92 RVGTSLVDMYMNWHSVLDGRKVFE--GMLKRNVVTWTSLLTGYI---------------- 133
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
Q G+ D + LF M EG PN +T S++LS+ +S +D G+
Sbjct: 134 ---------------QAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+HA +++ G S++ V N+L+ MY+K G + AR VF + R + VSW +++ L +G
Sbjct: 179 VHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR-DMVSWNTLMAGLVLNG 237
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACT---HGGLVEQGQRYYNMMKNVHKIKPTP 550
EA+QLF TY V+ C H GL Q + +++K H
Sbjct: 238 RDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLAR--QLHSSVLK--HGFHSYG 293
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
+ +++D +AG L +A + M +VV+W +++ C
Sbjct: 294 NVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGC 335
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ PA+R S + WT Q +++ + R+G L ++ +
Sbjct: 8 LAPAKR---STKFPTRTPWTMPFSTTWQGFVHQALDHFLDAHRRQGRCVGGGALLGIIKI 64
Query: 422 SSSLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S+ GKQ+HA +R G + + V +L+ MY ++ R+VF + ++ V
Sbjct: 65 CGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM-LKRNVV 123
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
+WTS++ Q G+ + + LF RM G+ P+ T+ VL+ G+V+ GQ +
Sbjct: 124 TWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH--- 180
Query: 541 KNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
K + F S++++ + GL++EA M D+V+W +L++
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR-DMVSWNTLMAG 232
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/707 (35%), Positives = 401/707 (56%), Gaps = 45/707 (6%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQD 139
S+ ++++ + + R+D A VF+ + D +T +I Y RF +A+++F EM V+D
Sbjct: 13 SYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKD 72
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
V + S++ C DL+ +K+ + + V +++N + + G +A
Sbjct: 73 VV-----SWNSMIKGCFDCADLTMARKLFDEMPERS----VVSWTTMINGFLQFGKIEVA 123
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ +F M +++++WN ++ + +GR++ F +M R+V++W SMI G Q+G
Sbjct: 124 EGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSE 183
Query: 260 EALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
EALG+F M+ +KP T ++ACAN L G QIHA++ + + + A
Sbjct: 184 EALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAA 243
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI+ YA +E + R+F +VV
Sbjct: 244 LITFYANCKQME---------------------------------DSLRVFHGKLHMNVV 270
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
WTA++ GY N ++DA+++F M+REG PN + ++ L+ L +LD G++IH +A
Sbjct: 271 IWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAA 330
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
++ G + + V N+LI MY + GN+N +F I ++ VSW S+IV AQHG G A
Sbjct: 331 VKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHGCGMWA 389
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ F +M+ ++PD IT+ G+L+AC+H G+ ++G+ + + H+A MVD
Sbjct: 390 LAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVD 449
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+LGR+G L+EA I NMP++ + + W LLSAC +H L++ + AA+ ++ +EP S A
Sbjct: 450 ILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSA 509
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L NLY+S +W D + IR+ MK G+ K G SW+ I+ + F D HP D I
Sbjct: 510 YVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRI 569
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y K+ + ++KE+G+VPD LHDVE++ KE ML +HSE+LAI FGLIST E +T+ +
Sbjct: 570 YQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITV 629
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
MKNLRVC DCHSAIK I K+V R+I+VRD+TRFHHF G CSC DYW
Sbjct: 630 MKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 202/450 (44%), Gaps = 70/450 (15%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV +++N + + I A+ +F +MP + + +WN+++ Y GR++ +F MP
Sbjct: 103 SVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMP 162
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QVLPTQFTVTSVLASCTALGDLSAG 164
R+ +SWT++I ++ GR + A+ +F +M+ +V PT T V+ +C L G
Sbjct: 163 CRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQG 222
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
++H+ V K G S ++ +L+ YA K + D SL +
Sbjct: 223 VQIHAHVFKLGYSFDAYISAALITFYAN------CKQMED--------------SLRVFH 262
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G+L + +VV W +++ GY N +AL +F M+++ L P++ + S
Sbjct: 263 GKLHM-----------NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL-PNQSSFTSA 310
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L++C LE L G++IH ++ + VGN+LI Y + G
Sbjct: 311 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCG----------------- 353
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
L DG + IF + +++V+W +++VG Q+G A+ F MV
Sbjct: 354 ------NLNDGVV----------IFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMV 397
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQI--HASALRSGEASSLSVSNALITMYSKAGN 462
R +P+ T + +LS S G+ + + S +S E L ++ + ++G
Sbjct: 398 RSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEV-KLDHYACMVDILGRSGK 456
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ A + + + ++ W ++ A H
Sbjct: 457 LEEAEELIRNMPVKANSMVWLVLLSACTMH 486
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 63/275 (22%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ G +HA + K G ++ +L+ FYA + + + +VF
Sbjct: 220 YQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF------------------ 261
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G+L + + V WT ++ Y + ++A+++F EM+++ VLP Q + T
Sbjct: 262 --HGKLHM-----------NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFT 308
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S L SC L L G+++H+ VK GL V V NSL+ MY + G+ +F + K
Sbjct: 309 SALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK 368
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
N+ SW NS+I G +Q+G AL F M+
Sbjct: 369 NIVSW-------------------------------NSVIVGCAQHGCGMWALAFFNQMV 397
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+ S ++PD+ T LSAC++ + G+ + Y
Sbjct: 398 R-SMVEPDEITFTGLLSACSHSGMSQKGRCLFKYF 431
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 262/719 (36%), Positives = 414/719 (57%), Gaps = 47/719 (6%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+FN N + +T+++ Y+ + + MF M V P F ++ S
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG---- 111
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG-------------------------- 194
+ G H+ V+K G V N++++MYA++G
Sbjct: 112 -NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 195 -------DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
E A+ +FD M +NV +W +V+ + L+ AR FD M ER VV+WN+
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M++GY+QNG E L +F M+ ++ ++PD+ T + +SAC++ L + + +
Sbjct: 231 MLSGYAQNGLAEEVLRLFDEMV-NAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK 289
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ V AL+ YAK G + A++I ++ G +Y N + + ++ Y ++G++ AR
Sbjct: 290 QIQLNCFVRTALLDMYAKCGSIGAARRIFDELG-AYRNSVTWNAMISAYTRVGNLDSARE 348
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLA 426
+F+++ R+VV W +M+ GY QNG + A+ELF+ M+ P+ T+ +++S L
Sbjct: 349 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 408
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+L+ G + + S+S NA+I MYS+ G++ A+RVF + R + VS+ ++I
Sbjct: 409 ALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLI 467
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A HG G EAI L M E GI+PD +T++GVLTAC+H GL+E+G++ + +K+
Sbjct: 468 SGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD---- 523
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
P H+A MVDLLGR G L++A +E MP+EP +GSLL+A R+HK ++LG++AA
Sbjct: 524 -PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAAN 582
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL +EPDNSG + L N+Y+S G+W+D IR++MK GVKKT G+SWV+ K+H F
Sbjct: 583 KLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFI 642
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D H + D IY + ++ +++E G++ D + VL DVEE+ KE+++ HSEKLAI +
Sbjct: 643 VADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYA 702
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+ + +R++KNLRVC DCH+AIK I KL R I+VRD RFH F GLCSC+DYW
Sbjct: 703 LLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 257/573 (44%), Gaps = 106/573 (18%)
Query: 4 PNPPSLISPLEFYAHL------------LQSNLKSRNPFV-----------GKLVHARII 40
PN S L FY+HL +Q + FV G HA ++
Sbjct: 63 PNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVL 122
Query: 41 KCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE--------------------------- 73
K G F++N++++ YA+ I +A+KVFDE
Sbjct: 123 KLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQA 182
Query: 74 ------MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
MP + + +W +++ YAK L+ A F+ MP R VSW ++ Y + G +
Sbjct: 183 QWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAE 242
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS-AGKKVHSFVVKTGLSGCVNVTNSL 186
+R+F EMV + P + T +V+++C++ GD A V + K C V +L
Sbjct: 243 EVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCF-VRTAL 301
Query: 187 LNMYAKVGDEMMAKAVFDGM-RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+MYAK G A+ +FD + +N +WN ++S + G LD AR F+ M R+VVTW
Sbjct: 302 LDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTW 361
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
NSMIAGY+QNG A+ +F M+ L PD+ T+ S +SAC +L L+LG + ++
Sbjct: 362 NSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLT 421
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
+ + NA+I Y++ G +E A+++ ++
Sbjct: 422 ENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQE--------------------------- 454
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
+ RDVV++ ++ G+ +G +A+ L +M G +P+ T +L+ S
Sbjct: 455 ------MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHA 508
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
L+ G+++ S + ++ ++ + + G + A+R + + S+
Sbjct: 509 GLLEEGRKV----FESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSL 564
Query: 486 IVALAQHG---LGE-EAIQLFERMLELGIKPDH 514
+ A H LGE A +LFE ++PD+
Sbjct: 565 LNASRIHKQVELGELAANKLFE------LEPDN 591
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 268/756 (35%), Positives = 401/756 (53%), Gaps = 102/756 (13%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K H +++ GLH +L N L+ + YA VF + P + +NT++
Sbjct: 20 KQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG---- 75
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
M + D+ F++A+ ++ M Q P FT VL
Sbjct: 76 ------------MVSNDA---------------FRDAVSVYASMRQHGFAPDNFTFPFVL 108
Query: 153 ASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+CT L G +HS V+KTG V V L+ +Y+K
Sbjct: 109 KACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSK------------------- 149
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+G L AR FD++ E++VV+W ++I GY ++G EALG+F +L +
Sbjct: 150 ------------NGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL-E 196
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L+PD FTL L AC+ + L G+ I Y+ +G VGN ++
Sbjct: 197 MGLRPDSFTLVRILYACSRVGDLASGRWIDGYM-----RESGSVGNVFVA---------- 241
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
T+L+D Y K G + ARR+FD + ++DVV W+A++ GY NG
Sbjct: 242 ------------------TSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNG 283
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA--SSLSV 449
+ K+A+++F M RE +P+ Y + + S S L +L+ G A L G+ S+ +
Sbjct: 284 MPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNW--ARGLMDGDEFLSNPVL 341
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
ALI Y+K G++ A+ VF + R++ V + ++I LA G A +F +M+++G
Sbjct: 342 GTALIDFYAKCGSVAQAKEVFKGMR-RKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVG 400
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++PD T+VG+L CTH GLV+ G RY++ M +V + PT H+ MVDL RAGLL EA
Sbjct: 401 MQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEA 460
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ I +MP+E + + WG+LL CR+HK+ L + ++L+ +EP NSG Y L N+YS+
Sbjct: 461 QDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSAS 520
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
+W++A IR S+ G++K G SWV++ VH F V D HP IY K+ ++ ++
Sbjct: 521 HRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDL 580
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+E G+ P T VL DVEE+ KE L HSEKLA+AF LIST +R++KNLRVC DCH
Sbjct: 581 REAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCH 640
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
AIK + K+ REI+VRD RFHHF +G CSCRDYW
Sbjct: 641 EAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 213/484 (44%), Gaps = 107/484 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG +H+ +IK G VF+K L+ Y+K ++ A+KVFDE+P K + SW
Sbjct: 120 VGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSW-------- 171
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
T II Y E G F A+ +F +++ + P FT+
Sbjct: 172 -----------------------TAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVR 208
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C+ +GDL++G+ + ++ ++G G V V SL++MYAK G A+ VFDGM
Sbjct: 209 ILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGM---- 264
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+E+DVV W+++I GY+ NG EAL +F M +
Sbjct: 265 ---------------------------VEKDVVCWSALIQGYASNGMPKEALDVFFEMQR 297
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ +++PD + + SAC+ L L+LG + EF + +G ALI YAK G V
Sbjct: 298 E-NVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVA 356
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A+++ F +R +D V + A++ G
Sbjct: 357 QAKEV---------------------------------FKGMRRKDCVVFNAVISGLAMC 383
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G A +F MV+ G +P+ T +L + +D G + SG +S SV+
Sbjct: 384 GHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYF-----SGMSSVFSVT 438
Query: 451 ------NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
++ + ++AG + A+ + + ++ W +++ H + A + ++
Sbjct: 439 PTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQ 498
Query: 505 MLEL 508
++EL
Sbjct: 499 LIEL 502
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/635 (37%), Positives = 372/635 (58%), Gaps = 67/635 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S++ +C L + +H+ + + +G V + NSL+++Y K G AV D
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCG------AVAD----- 117
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
AR FD M RD+ +W S+IAGY+QN EALG+ ML
Sbjct: 118 --------------------ARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGML 157
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ KP+ FT AS L A +G+QIHA ++ ++ VG+AL
Sbjct: 158 R-GRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSAL---------- 206
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
LD Y + G + A +FD L ++ V+W A++ G+ +
Sbjct: 207 -----------------------LDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 243
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G + + +F M R G + ++T S++ S + + +L+ GK +HA ++SGE S V
Sbjct: 244 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 303
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N ++ MY+K+G++ AR+VF+ + +++ V+W SM+ A AQ+GLG EA+ FE M + G
Sbjct: 304 GNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 362
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+ + IT++ +LTAC+HGGLV++G++Y++MMK + ++P H+ ++VDLLGRAGLL +A
Sbjct: 363 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDA 421
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
FI MP++P WG+LL +CR+HKN +G+ AA+ + ++PD++G L N+Y+S
Sbjct: 422 LVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYAST 481
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+W+ AA +RK MK GVKK SWV+I+N VH+F D HP+ + IY K +I +I
Sbjct: 482 GQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQI 541
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
++ G+VP+T VL V+E ++ L++HSEK+A+AF LI+ P T+RIMKN+R+C DCH
Sbjct: 542 RKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCH 601
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
SA ++I K+ REIVVRD RFHHF G CSC DY
Sbjct: 602 SAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 96/433 (22%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+++ + L + Y L+ + + R+ + +HA + SVFL NSL++ Y K
Sbjct: 52 LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+++ A++VFD MP + +CSW ++++ YA+ D+ E L+P
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQN---DMPDEALGLLPGMLR---------- 158
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
GRFK P FT S+L + A G+++H+ VK V
Sbjct: 159 ---GRFK---------------PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDV 200
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V ++LL+MYA+ G MA AVFD + KN SW
Sbjct: 201 YVGSALLDMYARCGRMDMAIAVFDQLESKNGVSW-------------------------- 234
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
N++IAG+++ G L MFA M ++ + FT +S SA A + L+ GK +
Sbjct: 235 -----NALIAGFARKGDGETTLLMFAEMQRN-GFEATHFTYSSVFSAIAGIGALEQGKWV 288
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA++I++ + VGN ++ YAK G +++D
Sbjct: 289 HAHMIKSGERLSAFVGNTILDMYAKSG-----------------------SMID------ 319
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
AR++FD + +DVV W +ML + Q GL ++AV F M + G N T ++L+
Sbjct: 320 ----ARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILT 375
Query: 421 VSSSLASLDHGKQ 433
S + GKQ
Sbjct: 376 ACSHGGLVKEGKQ 388
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL++ S + +G+ +HA +K H V++ ++L++ YA+
Sbjct: 168 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARC-------------- 213
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
GR+D+A VF+ + +++ VSW +I + G + + MF E
Sbjct: 214 -----------------GRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAE 256
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++ T FT +SV ++ +G L GK VH+ ++K+G V N++L+MYAK G
Sbjct: 257 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 316
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAG 251
+ A+ VFD + K+V +WN +++ G A F++M + + +T+ S++
Sbjct: 317 MIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTA 376
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPD 277
S G E F +M+K+ +L+P+
Sbjct: 377 CSHGGLVKEGKQYF-DMMKEYNLEPE 401
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +IK G LS F+ N++++ YAK+ S+ A+KVFD + K + +WN++L+A+A+
Sbjct: 285 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ 344
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +GR A+ F EM + V Q T S+
Sbjct: 345 YG-----------------------------LGR--EAVTHFEEMRKCGVHLNQITFLSI 373
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
L +C+ G + GK+ + + L ++ +++++ + G
Sbjct: 374 LTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAG 416
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/759 (33%), Positives = 406/759 (53%), Gaps = 104/759 (13%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+L+HA I++ L + L +L+ YA+ + A+K FDEM KTL +WN +++ Y+
Sbjct: 77 GQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ---DQVLPTQFT 147
+ G + A++++ +MV + + P T
Sbjct: 137 RN-------------------------------GDHRGALKIYQDMVSKSPEGMKPDAIT 165
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S L +C+ +GD+S G+++ + V +G + V N+L+NMY+K G A+ VFD ++
Sbjct: 166 FSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++V +W N+MI+GY++ G +AL +F
Sbjct: 226 NRDVIAW-------------------------------NTMISGYAKQGAATQALELFQR 254
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + KP+ T L+AC NLE L+ G+ IH + +++ +GN L++ Y K
Sbjct: 255 MGPNDP-KPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCS 313
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ AR++F+ LR RDV+ W ++V Y
Sbjct: 314 --------------------------------SSLEEARQVFERLRTRDVITWNILIVAY 341
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q G KDA+++F+ M E PN TLS +LS + L + GK +HA + +
Sbjct: 342 VQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADV 401
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ N+L+ MY++ G+++ VF I + VSW+++I A AQHG ++ F +L+
Sbjct: 402 VLENSLMNMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G+ D +T V L+AC+HGG++++G + + M H + P HF MVDLL RAG L+
Sbjct: 461 EGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLE 520
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSALCNLY 626
A N I +MP PD VAW SLLS C++H + A+KL +E D + L N+Y
Sbjct: 521 AAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVY 580
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ G+W+D +RK+ +K G S+++I + VH F D HP+ + I ++ ++
Sbjct: 581 AEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLS 637
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
++K+ G+VPD VLH+V+E+ KEQML +HSEKLAIA+GLISTP T L I+KNLR C
Sbjct: 638 KQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACV 697
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A KFI ++V R+IVVRD+TRFHHF+ G CSC+DYW
Sbjct: 698 DCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 244/511 (47%), Gaps = 71/511 (13%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y K G + A VF+ + + +SVSWT I+ + G ++ A+ + MV + + P
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ C++ DL G+ +H+ +++T L + + +L+ MYA+ D +A+ FD M
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K + +W N++IAGYS+NG AL ++ +
Sbjct: 122 KKTLVTW-------------------------------NALIAGYSRNGDHRGALKIYQD 150
Query: 268 MLKDS--SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M+ S +KPD T +S L AC+ + + G++I A + + + + V NALI+ Y+K
Sbjct: 151 MVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSK 210
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A+K+ ++ + +VIA+ T++ GY K
Sbjct: 211 CGSLESARKVFDR--LKNRDVIAWNTMISGYAK--------------------------- 241
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
G A+ELF+ M PKPN T +L+ ++L L+ G+ IH G S
Sbjct: 242 ----QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYES 297
Query: 446 SLSVSNALITMYSK-AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
L + N L+ MY+K + ++ AR+VF + R + ++W +IVA Q+G ++A+ +F++
Sbjct: 298 DLVIGNVLLNMYTKCSSSLEEARQVFERLRTR-DVITWNILIVAYVQYGQAKDALDIFKQ 356
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + P+ IT VL+AC G QG+ + ++ + + K S++++ R G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS-GRCKADVVLENSLMNMYNRCG 415
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
L + + + +V+W +L++A H
Sbjct: 416 SLDDTVGVFAAIR-DKSLVSWSTLIAAYAQH 445
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 230/481 (47%), Gaps = 101/481 (20%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + A A F + + V+W ++A +++NG+ EALG + M+ + L+PD
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEG-LRPDGAMFVVA 64
Query: 285 LSACANLEKLKLGKQIHAYIIRT---EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+ C++ + LK G+ +HA I+ T EFD +G ALI+ YA+ +E+
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETQLLEFDII--LGTALITMYARCRDLEL---------- 112
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
AR+ FD + + +V W A++ GY +NG ++ A+++++
Sbjct: 113 -----------------------ARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQ 149
Query: 402 SMVR---EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
MV EG KP+ T S+ L S + + G++I A + SG AS V NALI MYS
Sbjct: 150 DMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYS 209
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K G++ +AR+VF+ + R + ++W +MI A+ G +A++LF+RM KP+ +T++
Sbjct: 210 KCGSLESARKVFDRLKNR-DVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 519 GVLTACTHGGLVEQGQRYY---------------NMMKNVHKIKPTPSHFASMV------ 557
G+LTACT+ +EQG+ + N++ N++ + A V
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 558 -DLLG---------RAGLLQEAYNFIENMPLE---PDVVAWGSLLSAC----------RV 594
D++ + G ++A + + M LE P+ + ++LSAC V
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H + G+ A+ +L +NS L N+Y+ CG +D + + ++ S
Sbjct: 389 HALIASGRCKADVVL----ENS-----LMNMYNRCGSLDDTVGV-----FAAIRDKSLVS 434
Query: 655 W 655
W
Sbjct: 435 W 435
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 262/703 (37%), Positives = 393/703 (55%), Gaps = 68/703 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+LSAY++ G + + F+ MP D VSW +I Y F F M+ + P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ ++ L++CT +++ G+ + ++ TG+ V +L++MY K+G A +VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+M RDVV W++M+A Y++NG+ EALG+
Sbjct: 121 -------------------------------RMSHRDVVAWSAMVAAYARNGHPREALGL 149
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M D + P+K TL S L ACA+L L+ G +H R E
Sbjct: 150 FRQMDLDG-VAPNKVTLVSGLDACASLGDLRSGALMHQ---RVE---------------- 189
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
AQ I QSG V+ T L++ Y K G I A F + +++VVAW+A+
Sbjct: 190 -------AQGI--QSG-----VVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAIS 235
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH--ASALRSG 442
Y +N N+DA+ + M EG PN+ T ++L +++A+L G++IH L G
Sbjct: 236 AAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGG 295
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + V AL+ MYSK GN+ A +F+ I + V W S+I AQHG E+A++LF
Sbjct: 296 LESDVYVLTALVNMYSKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQHGQTEKALELF 354
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
ERM G++P IT+ VL AC+H G+++QG++++ H I P HF MVDLLGR
Sbjct: 355 ERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGR 414
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG + ++ + + +MP EP VAW + L ACR ++N+D AAE L ++P Y L
Sbjct: 415 AGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLL 474
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ G+W D A +R++M+ K G SW++++++VH F D HP+ I+ ++
Sbjct: 475 SNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAEL 534
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ +KE G+VPDT VLHDV+++VKE M+ +HSEKLA+AF L++TPE + +R++KNL
Sbjct: 535 QRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNL 594
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVCNDCH+A KFI KLV+REIVVRD RFH F+ G CSC DYW
Sbjct: 595 RVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 72/299 (24%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PN +L+S L+ A L +L+S G L+H R+ G+ V + +L+N Y K
Sbjct: 159 APNKVTLVSGLDACASL--GDLRS-----GALMHQRVEAQGIQSGVVVGTALVNLYGKCG 211
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
I A + F ++ K + +W+ I +AYA+ R NRD
Sbjct: 212 RIEAAVEAFGQIVEKNVVAWSAISAAYARNDR------------NRD------------- 246
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH--SFVVKTGLSGCV 180
AIR+ M + ++P T SVL +C A+ L G+++H + V+ GL V
Sbjct: 247 ------AIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V +L+NMY+K G+ +A +FD + LDL
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKI------------------AHLDL----------- 331
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
V WNS+IA +Q+G +AL +F M + L+P T S L AC++ L G++
Sbjct: 332 --VLWNSLIATNAQHGQTEKALELFERM-RLEGLQPTIITFTSVLFACSHAGMLDQGRK 387
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/724 (35%), Positives = 399/724 (55%), Gaps = 99/724 (13%)
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ YA VF V + +WN++L A+ MP R
Sbjct: 28 VGYAYSVFAHTRVLDVLTWNSMLRAFVNSN-----------MPRR--------------- 61
Query: 124 GRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
A++ + EM++ + +P +FT S+L C L + GK +H VVK L + +
Sbjct: 62 -----ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYI 116
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+LLNMYA GD L AR F++M R+
Sbjct: 117 ETTLLNMYAACGD-------------------------------LKSARFLFERMGHRNK 145
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V W SMI+GY +N EAL ++ M +D PD+ T+A+ +SACA L+ L +G ++H+
Sbjct: 146 VVWTSMISGYMKNHCPNEALLLYKKMEEDG-FSPDEVTMATLVSACAELKDLGVGMKLHS 204
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+I + +G+AL++ YAK G D+
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCG---------------------------------DL 231
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSV 421
AR++FD L D+DV AW+A++ GY +N + +A++LFR + +PN T+ A++S
Sbjct: 232 KTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISA 291
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L L+ G+ +H R+ + S+S++N+LI M+SK G+I+AA+R+F+ + ++ + +S
Sbjct: 292 CAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLIS 350
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W SM+ LA HGLG EA+ F M ++PD IT++GVLTAC+H GLV++G++ + ++
Sbjct: 351 WNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIE 410
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
++ ++ H+ MVDLL RAGLL EA FI MPL+PD WGS+L ACRV+ NL+LG
Sbjct: 411 ALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELG 470
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
+ AA LL +EP N G Y L N+Y+ W + +R+ M G++KT G S V I N
Sbjct: 471 EEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNI 530
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
H F D HP+ I + ++ +++K +G+V DT+ VL +++++ KE+ + HSEKL
Sbjct: 531 AHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKL 590
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+ +GL+ + + I+KNLRVC+DCH+ IK + K+ R+I +RD RFHHFK G CSC
Sbjct: 591 ALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSC 650
Query: 782 RDYW 785
RDYW
Sbjct: 651 RDYW 654
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/591 (23%), Positives = 262/591 (44%), Gaps = 115/591 (19%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK++H +++K LH ++++ +L+N YA + A+ +F+ M + W +++S Y
Sbjct: 97 VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYM 156
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K N PN A+ ++ +M +D P + T+ +
Sbjct: 157 K-----------NHCPN--------------------EALLLYKKMEEDGFSPDEVTMAT 185
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++++C L DL G K+HS + + + C + ++L+NMYAK GD A+ VFD
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFD------ 239
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
Q+ ++DV W+++I GY +N EAL +F +
Sbjct: 240 -------------------------QLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAG 274
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S+++P++ T+ + +SACA L L+ G+ +H YI RT+ + + N+LI ++K G ++
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDID 334
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A++I FDS+ +D+++W +M+ G +
Sbjct: 335 AAKRI---------------------------------FDSMSYKDLISWNSMVNGLALH 361
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI--HASALRSGEASSLS 448
GL ++A+ F M +P+ T +L+ S + GK++ AL S
Sbjct: 362 GLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS-E 420
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
++ + +AG + AR ++ + + W SM+ A + LGEEA + +
Sbjct: 421 HYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARC---L 477
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
LEL D + Y+ + + + ++ +M N I+ TP + ++D +
Sbjct: 478 LELEPTNDGV-YILLSNIYARRKMWNEVKKVRELM-NEKGIQKTPGCSSVVIDNI----- 530
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
A++F+ P++ +L R L +G +A +L+ D++
Sbjct: 531 ---AHSFLAGDCSHPEIAEISIMLRQVREKLKL-VGYVADTSEVLLNIDDN 577
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/717 (37%), Positives = 410/717 (57%), Gaps = 45/717 (6%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+F P+ D+ ++ ++ Y+ +G + +F + P F ++ G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---------------------------- 192
L H++V+K G + N++L+MYAK
Sbjct: 116 L-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 193 ---VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
G+E A +F+ M +N+ +W +V+ + G L+ AR FD+M ER VV+WN+M
Sbjct: 171 CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
+ Y+Q EAL +F ML++ + PD T T+S+C+++ L I I +
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEG-ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
V AL+ +AK G +EIA+ I ++ G S N + + ++ Y ++G + AR +F
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELG-SQRNAVTWNIMISAYTRVGKLSLARELF 348
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASL 428
D++ RDVV+W +M+ GY QNG + ++ELF+ M+ +P+ T++++LS + +L
Sbjct: 349 DNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ +S N+LI MYSK G++ A R+F + R + VS+ ++I
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISG 467
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
A +G G+EAI+L M E GI+PDH+TY+GVLTAC+H GL+ +G+ N+ K++ P
Sbjct: 468 FAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK---NVFKSIQA--P 522
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
T H+A MVDLLGRAG L EA I++MP++P +GSLL+A R+HK + LG++AA KL
Sbjct: 523 TVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKL 582
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+EP N G Y L N+Y+S G+WED +R+ MK G+KK+ G SWV+ + +VH F V
Sbjct: 583 FELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVG 642
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D H Q IY +A++ ++K +GFV D + L DVEE+ KE+ML HSEKLAI F L+
Sbjct: 643 DRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL 702
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ TT+R++KNLR+C DCH+AIK I KL REIVVRD RFH F +G+CSC DYW
Sbjct: 703 ISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/709 (35%), Positives = 399/709 (56%), Gaps = 70/709 (9%)
Query: 81 SWNTILSAYAKQGRLDL--ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
S N +++ G L + A VF D ++W +++ + + A++ + EM++
Sbjct: 12 SLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLE 71
Query: 139 -DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+ +P +FT S+L C L + GK +H VVK L + + +LLNMYA GD
Sbjct: 72 RSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGD-- 129
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
L AR F++M R+ V W SMI+GY +N
Sbjct: 130 -----------------------------LKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL ++ M +D PD+ T+A+ +SACA L+ L +G ++H++I + +G+
Sbjct: 161 PNEALLLYKKMEEDG-FSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGS 219
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
AL++ YAK G D+ AR++FD L D+DV
Sbjct: 220 ALVNMYAKCG---------------------------------DLKTARQVFDKLSDKDV 246
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
AW+A++ GY +N + +A++LFR + +PN T+ A++S + L L+ G+ +H
Sbjct: 247 YAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHD 306
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
R+ + S+S++N+LI M+SK G+I+AA+R+F+ + ++ + +SW SM+ A HGLG
Sbjct: 307 YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHGLGR 365
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA+ F M ++PD IT++GVLTAC+H GLV++G++ + ++ ++ ++ H+ M
Sbjct: 366 EALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCM 425
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAGLL EA FI MPL+PD WGS+L ACRV+ NL+LG+ AA LL +EP N
Sbjct: 426 VDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTND 485
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y+ W + +R+ M G++KT G S V I N H F D HP+
Sbjct: 486 GVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIA 545
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I + ++ +++K G+V DT+ VL +++++ KE+ + HSEKLA+ +GL+ + +
Sbjct: 546 EISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRI 605
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I+KNLRVC+DCH+ IK + K+ R+I +RD RFHHFK G CSCRDYW
Sbjct: 606 VILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 219/480 (45%), Gaps = 101/480 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK++H +++K LH ++++ +L+N YA + A+ +F+ M + W +++S Y
Sbjct: 97 VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYM 156
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K N PN A+ ++ +M +D P + T+ +
Sbjct: 157 K-----------NHCPN--------------------EALLLYKKMEEDGFSPDEVTMAT 185
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++++C L DL G K+HS + + + C + ++L+NMYAK GD A+ VFD
Sbjct: 186 LVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFD------ 239
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
++ ++DV W+++I GY +N EAL +F +
Sbjct: 240 -------------------------KLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAG 274
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S+++P++ T+ + +SACA L L+ G+ +H YI RT+ + + N+LI ++K G ++
Sbjct: 275 GSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDID 334
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A++I FDS+ +D+++W +M+ G+ +
Sbjct: 335 AAKRI---------------------------------FDSMSYKDLISWNSMVNGFALH 361
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI--HASALRSGEASSLS 448
GL ++A+ FR M +P+ T +L+ S + GK++ AL S
Sbjct: 362 GLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS-E 420
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
++ + +AG + AR ++ + + W SM+ A + LGEEA + ++
Sbjct: 421 HYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKL 480
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/709 (34%), Positives = 389/709 (54%), Gaps = 74/709 (10%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFT 147
Y K G LDLACEVF M +R+ VSWT ++V + G +R+ EM + P ++T
Sbjct: 2 YVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYT 61
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+++ L +C +GD +AG +H V+ G V +SL+ +Y+K G A+ VFDG
Sbjct: 62 LSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAG 121
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
L + + TWN+M++GY+ G+ +AL +F
Sbjct: 122 LGS------------------------------GIATWNAMVSGYAHAGHGRDALLVFRE 151
Query: 268 MLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M + + +PD+FT AS L AC+ L + G Q+HA + + F
Sbjct: 152 MRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS------------- 198
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
N I L+D Y+K + A ++F+ L ++V+ WTA++VG
Sbjct: 199 ------------------NAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+ Q G +A+ELFR R G +P+++ LS+++ V + A ++ G+Q+H ++ +
Sbjct: 241 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 300
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+S N+++ MY K G + A R+F + VSWT+M+ L +HGLG EA+ LFE M
Sbjct: 301 VSAGNSIVDMYLKCGLPDEAERMFREMR-APNVVSWTTMVNGLGKHGLGREAVALFEEMR 359
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G++PD +TY+ +L+AC+H GLV++ +RY++ ++ ++P H+A MVDLLGRAG L
Sbjct: 360 AGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGEL 419
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA + I MP+EP V W +LLSACRVHK++ +G+ A + LL ++ DN Y L N+
Sbjct: 420 REARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVL 479
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF---GVEDWLHPQRDAIYNKMA 683
+ G+W + +R +M+ G+KK G SWV++ +VH F G E+ HPQ I +
Sbjct: 480 AEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLR 539
Query: 684 KIWDEIKE-MGFVPDTAS-VLHDVEEDVKEQMLRHHSEKLAIAF-----GLISTPENTTL 736
+ ++E +G+ D A LHDV+E+ + + LR HSE+LA+ G+ +
Sbjct: 540 DMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPI 599
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+ KNLRVC DCH K + +V R +VVRDA RFH F+ G CSC+DYW
Sbjct: 600 RVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/474 (24%), Positives = 196/474 (41%), Gaps = 101/474 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT-LCSWNTILSAYA 90
G +H ++ G + +SL+ Y+K I A++VFD + + + +WN ++S YA
Sbjct: 78 GVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYA 137
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G RD+ ++ + E+ R + Q P +FT S
Sbjct: 138 HAGH------------GRDA------LLVFREMRRHEG-----------QHQPDEFTFAS 168
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+L +C+ LG G +VH+ + +G S N + +L++MY K +A VF+ +
Sbjct: 169 LLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLER 228
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
KNV W VV G++Q G EAL +F
Sbjct: 229 KNVIQWTAVV-------------------------------VGHAQEGQVTEALELFRRF 257
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ S +PD L+S + A+ ++ G+Q+H Y I+ D TG
Sbjct: 258 WR-SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK---DPTGT-------------- 299
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+V A +++D Y+K G A R+F +R +VV+WT M+ G
Sbjct: 300 ----------------DVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLG 343
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
++GL ++AV LF M G +P+ T A+LS S +D ++ + R +
Sbjct: 344 KHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKA 403
Query: 449 VSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEA 498
A ++ + +AG + AR + + W +++ A H +G EA
Sbjct: 404 EHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREA 457
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 16/302 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++ Y K RL +A +VF + ++ + WT ++V + + G+ A+ +F +
Sbjct: 204 GALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGAR 263
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++SV+ + G++VH + +K V+ NS+++MY K G A+ +
Sbjct: 264 PDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERM 323
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYD 258
F MR NV SW +V+ G A A F++M +E D VT+ ++++ S G
Sbjct: 324 FREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLV 383
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGN 317
E F+ + +D +++P A + +L+ + +IRT + T V
Sbjct: 384 DECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARD----LIRTMPMEPTVGVWQ 439
Query: 318 ALISC---YAKVG-GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
L+S + V G E ++ G + +N + + +L + G+ ++ D++R
Sbjct: 440 TLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVL---AEAGEWRECHKVRDAMR 496
Query: 374 DR 375
R
Sbjct: 497 RR 498
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 270/783 (34%), Positives = 420/783 (53%), Gaps = 98/783 (12%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-SVFLKNSLMNFYAKTE 62
P P+ + + A LLQS ++ + G+L+HAR++ G S FL N L+ Y+
Sbjct: 162 PPAPAAATTVHL-ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCA 220
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
++ A ++F M P R++VSWTT++ ++
Sbjct: 221 DLASALRLFAAM-------------------------------PRRNAVSWTTLVSGLSQ 249
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
+A+ F M + V PT+F ++S + ALG + + G + V
Sbjct: 250 NLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFV 308
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
++L +MY+K G L A FDQM ++D
Sbjct: 309 ASNLADMYSKCG-------------------------------LLSEACRVFDQMPQKDA 337
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V W +MI GY++NG A+ F +M ++ + D+ S LSA L+ L K IH
Sbjct: 338 VAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHC 397
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ + F+ V NALI YAK VE A ++++ I
Sbjct: 398 CVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK------------------------I 433
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
P +VV+ T+M+ GY + ++A+ ++ + R+G +PN +T S+M+
Sbjct: 434 DPG--------GWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGC 485
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ A L+ G Q+HA +++ V + L+ MY K G I+ + ++FN I +R + ++W
Sbjct: 486 AMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAW 544
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
++I AQHG G EAIQ F+RM+ GI+P+HI +V +LTAC+H GLV++G +Y+ MK
Sbjct: 545 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKE 604
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
H I+P H++ ++D GRAG L EAY FI MP++P+ W SLL ACR+ + +LG+
Sbjct: 605 AHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGE 664
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AA+ L+ +EP N+G + +L +Y+S G+WED +RK M+ +KK GFSWV K
Sbjct: 665 VAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKT 724
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
HVFG EDW HPQ+ IY K+ ++ IKE G++PDT+ + ++E+ KE++LR+HSE++A
Sbjct: 725 HVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIA 784
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
+AF LIS P + + KNLR+C DCH+A KFICK+ R+I+VRD +RFHHF G CSC
Sbjct: 785 VAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCG 844
Query: 783 DYW 785
DYW
Sbjct: 845 DYW 847
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 123/542 (22%), Positives = 220/542 (40%), Gaps = 91/542 (16%)
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-VTNSLLNMYAKVGDEMMAKAV 202
T + S+L SC GDL G+ +H+ +V +G + + N L+ MY+ D A +
Sbjct: 19 TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78
Query: 203 FDGMRLKNVSSWNVVVS------LH---------IHSGRLDLARAQFDQMIERDVVTWNS 247
F M +N SW +VS +H + + R ++ + ++
Sbjct: 79 FAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHT 138
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT---LASTLSACANLEKLKLGKQIHAYI 304
+ A + +G + + + P T LAS L +C L+ G+ +HA +
Sbjct: 139 LAASHCHSGPTLMVKYWGQRLWRPPA--PAAATTVHLASLLQSCGRAGDLRRGRLLHARL 196
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+ SG + + L+ Y D+
Sbjct: 197 V--------------------------------LSGAAAASTFLANHLITMYSHCADLAS 224
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A R+F ++ R+ V+WT ++ G QN ++ DA+ F +M R G P + LS+ +++
Sbjct: 225 ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA 284
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L + + ASA G + L V++ L MYSK G ++ A RVF+ + +++ V+WT+
Sbjct: 285 LGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMP-QKDAVAWTA 342
Query: 485 MIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTA-----------CTHGGLVEQ 532
MI A++G E A+ F M G + D + VL+A H + +
Sbjct: 343 MIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKA 402
Query: 533 GQRYYNMMKN-----------------VHKIKPTPSHF---ASMVDLLGRAGLLQEA--- 569
G ++N V KI P + SM+D ++EA
Sbjct: 403 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 462
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSS 628
Y + +EP+ + S++ C + L+ G ++ A+ + +S S L ++Y
Sbjct: 463 YVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 522
Query: 629 CG 630
CG
Sbjct: 523 CG 524
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 41/269 (15%)
Query: 408 PKPNNYT---LSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNI 463
P P T L+++L L G+ +HA + SG A+ S ++N LITMYS ++
Sbjct: 13 PAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADL 72
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
+A R+F + R+ VSWT+++ L+Q+ + +A+ F M G+ P + Y
Sbjct: 73 ASALRLFAAMP-RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY------ 125
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS--MVDLLGRAGLLQEAYNFIENMPLEPD 581
+++N + H + + H MV G+ A P
Sbjct: 126 ---------ETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPA-------PAAAT 169
Query: 582 VVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA--LCNLYSSCGKWEDAANIR 639
V SLL +C +L G++ +L+L + + A L +YS C A +
Sbjct: 170 TVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL- 228
Query: 640 KSMKYVGVKKTQGFSWVQI-----QNKVH 663
+ + + SW + QN +H
Sbjct: 229 ----FAAMPRRNAVSWTTLVSGLSQNLMH 253
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/756 (34%), Positives = 411/756 (54%), Gaps = 67/756 (8%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VHAR+++ GL F A K+F SA +
Sbjct: 42 KEVHARMLRTGLFFDPF----------------SASKLFTA-------------SALSSF 72
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSV 151
LD A +F+ +P + +W T+I Y + +F++++ + LP +FT V
Sbjct: 73 STLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFV 132
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ + + L G VH +K + + NSL+ Y GD MA+ +F G+ K
Sbjct: 133 IKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCK-- 190
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
DVV+WNSMI+ ++Q +AL +F M ++
Sbjct: 191 -----------------------------DVVSWNSMISAFAQGNCPEDALELFLKMERE 221
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ + P+ T+ LSACA L+ G+ + +YI R + NA++ Y K G V+
Sbjct: 222 NVM-PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDD 280
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AQK+ ++ + +V ++T +LDGY K+GD AR +F+++ +++ AW ++ YEQNG
Sbjct: 281 AQKLFDE--MPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNG 338
Query: 392 LNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
K+A+ +F + + + KP+ TL + LS + L ++D G IH R G + +
Sbjct: 339 KPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLI 398
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
++L+ MY+K G++ A VF + R V W++MI L HG G+ AI LF M E +
Sbjct: 399 SSLVDMYAKCGSLEKALEVFYSVEERDVYV-WSAMIAGLGMHGRGKAAIDLFFEMQEAKV 457
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T+ VL AC+H GLV++G+ +++ M+ V+ + P H+A MVD+LGRAG L+EA
Sbjct: 458 KPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAM 517
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
I M P WG+LL AC +H N++LG++A+++LL +EP N GA L N+Y+ G
Sbjct: 518 ELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTG 577
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+WE + +RK M+ +KK G S ++ VH F V D HP IY+K+ +I ++K
Sbjct: 578 RWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLK 637
Query: 691 EMGFVPDTASVLHDVEE-DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+G+ P+ + +L +EE D+KEQ L HSEKLAIAFGL++ + +R++KNLR+C DCH
Sbjct: 638 SVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCH 697
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K + ++ DR+I++RD RFHHF+ G CSC DYW
Sbjct: 698 AFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 216/472 (45%), Gaps = 68/472 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG VH IK + +++ NSL+ FY +S A+++F + K + SWN+++SA+A
Sbjct: 144 VGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFA 203
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
QG ++A+ +F++M ++ V+P T+
Sbjct: 204 -QGNCP------------------------------EDALELFLKMERENVMPNSVTMVG 232
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C DL G+ V S++ + G+ + + N++L+MY K G A+ +FD M ++
Sbjct: 233 VLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SW +++ + G D AR F+ M +++ WN +I+ Y QNG EAL +F +
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQL 352
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
KPD+ TL STLSACA L + LG IH YI R + ++L+ YAK G +E
Sbjct: 353 SKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLE 412
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A +F S+ +RDV W+AM+ G +
Sbjct: 413 ---------------------------------KALEVFYSVEERDVYVWSAMIAGLGMH 439
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G K A++LF M KPN+ T + +L S +D G+ H G +
Sbjct: 440 GRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKH 499
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEA 498
++ + +AG + A + N + W +++ A + H LGE A
Sbjct: 500 YACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELA 551
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 214/496 (43%), Gaps = 110/496 (22%)
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ + +L + S + C++ L K+VH+ +++TGL D
Sbjct: 17 LNNNLLFRNHQILSTIDKCSSSKQL---KEVHARMLRTGL----------------FFDP 57
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A +F L + S+ LD AR FDQ+ + ++ TWN++I Y+ +
Sbjct: 58 FSASKLFTASALSSFST-------------LDYARNLFDQIPQPNLYTWNTLIRAYASSS 104
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
F++ +F ++L P+KFT + A + L+ ++G +H I+ F +
Sbjct: 105 DPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYIL 164
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N+L+ Y G + +A+ R+F + +D
Sbjct: 165 NSLVRFYGACGDLSMAE---------------------------------RLFKGISCKD 191
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+W +M+ + Q +DA+ELF M RE PN+ T+ +LS + L+ G+ + +
Sbjct: 192 VVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCS 251
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR-------------------- 476
R G L++ NA++ MY+K G+++ A+++F+ + R
Sbjct: 252 YIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDA 311
Query: 477 ----------QETVSWTSMIVALAQHGLGEEAIQLF-ERMLELGIKPDHITYVGVLTACT 525
+E +W +I A Q+G +EA+ +F E L KPD +T V L+AC
Sbjct: 312 ARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACA 371
Query: 526 HGGLVEQGQRYYNMMK------NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
G ++ G + +K N H I +S+VD+ + G L++A ++ E
Sbjct: 372 QLGAIDLGGWIHVYIKREGIVLNCHLI-------SSLVDMYAKCGSLEKALEVFYSVE-E 423
Query: 580 PDVVAWGSLLSACRVH 595
DV W ++++ +H
Sbjct: 424 RDVYVWSAMIAGLGMH 439
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 46/303 (15%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +L+S L A L +L G +H I + G+ L+ L +SL++ YAK
Sbjct: 358 PDEVTLVSTLSACAQLGAIDL-------GGWIHVYIKREGIVLNCHLISSLVDMYAKC-- 408
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
G L+ A EVF + RD W+ +I
Sbjct: 409 -----------------------------GSLEKALEVFYSVEERDVYVWSAMIAGLGMH 439
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK-VHSFVVKTGLSGCVNV 182
GR K AI +F EM + +V P T T+VL +C+ G + G+ H G+ +
Sbjct: 440 GRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKH 499
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMR-LKNVSSWNVVV---SLHIHSGRLDLARAQFDQMI 238
++++ + G A + + M + S W ++ SLH++ +LA Q ++
Sbjct: 500 YACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLE 559
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
R+ + Y++ G +E + +++D+ LK K S++ A N+ + +G
Sbjct: 560 PRNHGAIVLLSNIYAKTG-RWEKVSELRKLMRDTELK--KEPGCSSIEANGNVHEFLVGD 616
Query: 299 QIH 301
H
Sbjct: 617 NTH 619
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 266/717 (37%), Positives = 410/717 (57%), Gaps = 45/717 (6%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+F P+ D+ ++ ++ Y+ +G + +F + P F ++ G+
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---------------------------- 192
+ H++V+K G + N++L+MYAK
Sbjct: 116 M-----FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170
Query: 193 ---VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
G+E A +F+ M +N+ +W +V+ + G L+ AR FD+M ER VV+WN+M
Sbjct: 171 CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
+ Y+Q EAL +F ML++ + PD T T+S+C+++ L I I +
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEG-ITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
V AL+ +AK G +EIA+ I ++ G S N + + ++ Y ++G + AR +F
Sbjct: 290 VLNSFVKTALLDMHAKFGNLEIARNIFDELG-SQRNAVTWNIMISAYTRVGKLSLARELF 348
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASL 428
D++ RDVV+W +M+ GY QNG + ++ELF+ M+ +P+ T++++LS + +L
Sbjct: 349 DNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ +S N+LI MYSK G++ A R+F + R + VS+ ++I
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISG 467
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
A +G G+EAI+L M E GI+PDH+TY+GVLTAC+H GL+ +G+ N+ K++ P
Sbjct: 468 FAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGK---NVFKSIQA--P 522
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
T H+A MVDLLGRAG L EA I++MP++P +GSLL+A R+HK + LG++AA KL
Sbjct: 523 TVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKL 582
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+EP N G Y L N+Y+S G+WED +R+ MK G+KK+ G SWV+ + +VH F V
Sbjct: 583 FELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVG 642
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D H Q IY +A++ ++K +GFV D + L DVEE+ KE+ML HSEKLAI F L+
Sbjct: 643 DRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL 702
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ TT+R++KNLR+C DCH+AIK I KL REIVVRD RFH F +G+CSC DYW
Sbjct: 703 ISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/704 (35%), Positives = 392/704 (55%), Gaps = 67/704 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C NT+L+ Y++ GR + A VF M RD +SW +++ Y + G+ + +++ E++Q
Sbjct: 433 VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQ 492
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ T S LA+C+ L K VH+ ++ G + V N+L+ MY K+G M
Sbjct: 493 MGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMME 552
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
AK V M + D VTWN++I G+++N
Sbjct: 553 AKKVLQ-------------------------------TMPQPDRVTWNALIGGHAENEEP 581
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL-KLGKQIHAYIIRTEFDATGPVGN 317
EA+ + ++++ + + T+ S L AC+ + L K G IHA+I+ T F++ V N
Sbjct: 582 NEAVKAY-KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN 640
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YAK G D+ + IFD L ++
Sbjct: 641 SLITMYAKCG---------------------------------DLNSSNYIFDGLGNKSP 667
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+ W AM+ +G ++A+++F M G + ++ S L+ +++LA L+ G+Q+H
Sbjct: 668 ITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGL 727
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
++ G S L V+NA + MY K G ++ ++ R +SW +I A A+HG ++
Sbjct: 728 VIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR-LSWNILISAFARHGCFQK 786
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A + F ML+LG KPDH+T+V +L+AC HGGLV++G YY+ M + P H ++
Sbjct: 787 ARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCII 846
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGR+G L A FI+ MP+ P+ +AW SLL+ACR+H NL+L + AE LL ++P +
Sbjct: 847 DLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDS 906
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY N+ ++ GKWED N+RK M +KK SWV++++KVH FG+ + HPQ
Sbjct: 907 AYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASR 966
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
I K+ ++ KE G+VPDT+ LHD++E+ KE L +HSE+LA+AFGLI+TPE++TLR
Sbjct: 967 ISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLR 1026
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
I KNLRVC DCHS KF+ +V R+IV+RD RFHHF G CSC
Sbjct: 1027 IFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/563 (26%), Positives = 267/563 (47%), Gaps = 104/563 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I ++L +F N+L+N Y+K +I +A+ VFDEM + SW+T+LS Y +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+G ++ A+ +F +M V P F V S+
Sbjct: 173 -------------------------------VGLYEEAVGLFCQMWGLGVEPNGFMVASL 201
Query: 152 LASCTALGDLS-AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ +C+ G ++ G +VH FVVKTG+ G V V +L++ Y +G A+ +F+
Sbjct: 202 ITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFE------ 255
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+M + +VV+W S++ GYS +G E L ++ M +
Sbjct: 256 -------------------------EMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM-R 289
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ ++ T A+ S+C LE LG Q+ +II+ F+ + V N+LIS ++ VE
Sbjct: 290 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 349
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A +FD + + D+++W AM+ Y +
Sbjct: 350 ---------------------------------EACYVFDHMNECDIISWNAMISAYAHH 376
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
GL ++++ F M + N+ TLS++LSV SS+ +L G+ IH ++ G S++ +
Sbjct: 377 GLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCIC 436
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
N L+T+YS+AG A VF + R + +SW SM+ Q G + +++ +L++G
Sbjct: 437 NTLLTLYSEAGRSEDAELVFQAMTER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGK 495
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMM--KNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+H+T+ L AC++ + + + + ++ H + ++V + G+ G++ E
Sbjct: 496 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGN---ALVTMYGKLGMMME 552
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A ++ MP +PD V W +L+
Sbjct: 553 AKKVLQTMP-QPDRVTWNALIGG 574
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 261/545 (47%), Gaps = 102/545 (18%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S ++ ++ AC VF+ M D +SW +I Y G + ++R F M
Sbjct: 336 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE 395
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T++S+L+ C+++ +L G+ +H VVK GL V + N+LL +Y++
Sbjct: 396 TNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSE---------- 445
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+GR + A F M ERD+++WNSM+A Y Q+G + L
Sbjct: 446 ---------------------AGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGL 484
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ A +L+ + + T AS L+AC+N E L K +HA II F VGNAL++
Sbjct: 485 KILAELLQMGKVM-NHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTM 543
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K+G + A+K+++ ++ D V W A
Sbjct: 544 YGKLGMMMEAKKVLQ---------------------------------TMPQPDRVTWNA 570
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNY-TLSAMLSVSSSLAS-LDHGKQIHASALR 440
++ G+ +N +AV+ ++ ++RE P NY T+ ++L S+ L HG IHA +
Sbjct: 571 LIGGHAENEEPNEAVKAYK-LIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVL 629
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+G S V N+LITMY+K G++N++ +F+ + + ++W +M+ A A HG GEEA++
Sbjct: 630 TGFESDDYVKNSLITMYAKCGDLNSSNYIFDGL-GNKSPITWNAMVAANAHHGCGEEALK 688
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM--------------------- 539
+F M +G+ D ++ G L A + ++E+GQ+ + +
Sbjct: 689 IFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYG 748
Query: 540 ----MKNVHKIKPTPSHFAS-----MVDLLGRAGLLQEAY-NFIENMPL--EPDVVAWGS 587
M +V K+ P P + + ++ R G Q+A F E + L +PD V + S
Sbjct: 749 KCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVS 808
Query: 588 LLSAC 592
LLSAC
Sbjct: 809 LLSAC 813
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 220/522 (42%), Gaps = 102/522 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K+VHA II G H + + N+L+ Y K + AKKV MP +WN ++ +A+
Sbjct: 519 KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAE- 577
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF-TVTSV 151
N PN A++ + ++++++ +P + T+ SV
Sbjct: 578 ----------NEEPNE--------------------AVKAY-KLIREKGIPANYITMVSV 606
Query: 152 LASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L +C+A D L G +H+ +V TG V NSL+ MYAK GD + +FDG+ K+
Sbjct: 607 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 666
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+WN +M+A + +G EAL +F M +
Sbjct: 667 PITWN-------------------------------AMVAANAHHGCGEEALKIFGEM-R 694
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ + D+F+ + L+A ANL L+ G+Q+H +I+ F++ V NA + Y K G +
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 754
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
K++ Q +R ++W ++ + ++
Sbjct: 755 DVLKMLPQP---------------------------------INRSRLSWNILISAFARH 781
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
G + A E F M++ GPKP++ T ++LS + +D G + S R G +
Sbjct: 782 GCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEH 841
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+I + ++G ++ A + ++W S++ A HG E A + E +LEL
Sbjct: 842 CVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELD 901
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
D YV C G E + M + + IK P+
Sbjct: 902 -PSDDSAYVLYSNVCATSGKWEDVENLRKEMGS-NNIKKQPA 941
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 216/437 (49%), Gaps = 45/437 (10%)
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS----SWNVVVSLHIHSGRLDLARAQF 234
C+N N L ++++ +M KA+ + +V+ N +++++ G ++ AR F
Sbjct: 93 CLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 152
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D+M R+ +W++M++GY + G EA+G+F M ++P+ F +AS ++AC+ +
Sbjct: 153 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW-GLGVEPNGFMVASLITACSRSGYM 211
Query: 295 -KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
G Q+H ++++T VG AL+ Y +G V AQ
Sbjct: 212 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ-------------------- 251
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
++F+ + D +VV+WT+++VGY +G + + +++ M +EG N
Sbjct: 252 -------------KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQN 298
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T + + S L G Q+ ++ G S+SV+N+LI+M+S ++ A VF+ +
Sbjct: 299 TFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHM 358
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ + +SW +MI A A HGL E+++ F M L + + T +L+ C+ ++ G
Sbjct: 359 N-ECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWG 417
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+ + ++ + + +++ L AG ++A + M E D+++W S++ AC
Sbjct: 418 RGIHGLVVKL-GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMM-ACY 474
Query: 594 VH--KNLDLGKIAAEKL 608
V K LD KI AE L
Sbjct: 475 VQDGKCLDGLKILAELL 491
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
N+ L ++S +A GK +HA + + +N LI MYSK GNI AR VF+
Sbjct: 98 NFPLKGFSEITSQMA----GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFD 153
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG-LV 530
+ R E SW++M+ + GL EEA+ LF +M LG++P+ ++TAC+ G +
Sbjct: 154 EMRHRNEA-SWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 212
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
++G + + + + A +V G GL+ A E MP + +VV+W SL+
Sbjct: 213 DEGFQVHGFVVKTGILGDVYVGTA-LVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMV 270
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
N G++ + + SG + + SSCG ED
Sbjct: 271 GYSDSGN--PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLED 312
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 45/254 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA I+ G ++KNSL+ YAK ++ + +FD + K+ +WN +++A A
Sbjct: 620 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 679
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G C + A+++F EM V QF+ +
Sbjct: 680 HG-----CG--------------------------EEALKIFGEMRNVGVNLDQFSFSGG 708
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD-----EMMAKAVFDGM 206
LA+ L L G+++H V+K G ++VTN+ ++MY K G+ +M+ + + +
Sbjct: 709 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI-NRS 767
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYDFEAL 262
RL SWN+++S G AR F +M+ + D VT+ S+++ + G E L
Sbjct: 768 RL----SWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 823
Query: 263 GMFANMLKDSSLKP 276
+ +M ++ + P
Sbjct: 824 AYYDSMTREFGVFP 837
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H +IK G + + N+ M+ Y K + K+ + ++ SWN ++SA+A+
Sbjct: 721 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 780
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G A E F+ M P D V++ +++ N G + + M + +F
Sbjct: 781 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR------EFG 834
Query: 148 VTSVLASCTALGDL 161
V + C + DL
Sbjct: 835 VFPGIEHCVCIIDL 848
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/758 (33%), Positives = 409/758 (53%), Gaps = 99/758 (13%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G+ VH ++K G H VF+ N+L+ Y++
Sbjct: 141 LLGQEVHGFVVKNGFHGDVFVCNALIMMYSEV---------------------------- 172
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G L LA +F+ + N+D VSW+T+I +Y+ G A+ + +M +V P++ +
Sbjct: 173 ---GSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMI 229
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSG--CVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
S+ L DL GK +H++V++ G G V + +L++MY K + A+ VFDG
Sbjct: 230 SITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDG-- 287
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
L++A +++W +MIA Y E + +F
Sbjct: 288 ---------------------LSKAS--------IISWTAMIAAYIHCNNLNEGVRLFVK 318
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML + + P++ T+ S + C L+LGK +HA+ +R F
Sbjct: 319 MLGEG-MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFT----------------- 360
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
L+++ T +D Y K GD+ AR +FDS + +D++ W+AM+ Y
Sbjct: 361 ----------------LSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSY 404
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QN +A ++F M G +PN T+ ++L + + SL+ GK IH+ + G +
Sbjct: 405 AQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDM 464
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ + + MY+ G+I+ A R+F R ++ W +MI A HG GE A++LFE M
Sbjct: 465 ILKTSFVDMYANCGDIDTAHRLFAEATDRDISM-WNAMISGFAMHGHGEAALELFEEMEA 523
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
LG+ P+ IT++G L AC+H GL+++G+R ++ M + P H+ MVDLLGRAGLL
Sbjct: 524 LGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLD 583
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA+ I++MP+ P++ +GS L+AC++HKN+ LG+ AA++ L +EP SG + N+Y+
Sbjct: 584 EAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYA 643
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S +W D A IR++MK G+ K G S +++ +H F + D HP +Y + ++ +
Sbjct: 644 SANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMRE 703
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++++ G+ PD + VLH+++++ K L +HSEKLA+A+GLIST +RI+KNLRVC+D
Sbjct: 704 KLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDD 763
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+A K + K+ REI+VRD RFHHFK+G CSC DYW
Sbjct: 764 CHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 224/481 (46%), Gaps = 68/481 (14%)
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+I +Y + +A +++ M F + SVL +C + G++VH FVVK G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
G V V N+L+ MY++VG +A+ +FD + K+V SW+ ++ + SG LD
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD------- 207
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
EAL + +M +KP + + S A L LK
Sbjct: 208 ------------------------EALDLLRDM-HVMRVKPSEIGMISITHVLAELADLK 242
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
LGK +HAY++R G G + GV + T L+D
Sbjct: 243 LGKAMHAYVMR-----NGKCGKS---------GVPLC-----------------TALIDM 271
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY-EQNGLNKDAVELFRSMVREGPKPNNYT 414
Y+K ++ ARR+FD L +++WTAM+ Y N LN + V LF M+ EG PN T
Sbjct: 272 YVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLN-EGVRLFVKMLGEGMFPNEIT 330
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+ +++ + +L+ GK +HA LR+G SL ++ A I MY K G++ +AR VF+
Sbjct: 331 MLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFK 390
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
++ + W++MI + AQ+ +EA +F M GI+P+ T V +L C G +E G+
Sbjct: 391 -SKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGK 449
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
++ + IK S VD+ G + A+ + D+ W +++S +
Sbjct: 450 WIHSYIDK-QGIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWNAMISGFAM 507
Query: 595 H 595
H
Sbjct: 508 H 508
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ Y +N DA +++ M + +N+ + ++L + S G+++H +++G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V NALI MYS+ G++ AR +F+ I ++ VSW++MI + + GL +EA+ L
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIE-NKDVVSWSTMIRSYDRSGLLDEALDLL 213
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLG 561
M + +KP I + + ++ G+ + +M+N K +++D+
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
+ L A + + + +++W ++++A NL+ G
Sbjct: 274 KCENLAYARRVFDGLS-KASIISWTAMIAAYIHCNNLNEG 312
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +++S LL K+ + +GK +H+ I K G+ + LK S ++ YA
Sbjct: 427 PNERTMVS-------LLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGD 479
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A ++F E + + WN ++S +A G + A E+F
Sbjct: 480 IDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFE-------------------- 519
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNV 182
EM V P T L +C+ G L GK++ H V + G + V
Sbjct: 520 -----------EMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEH 568
Query: 183 TNSLLNMYAKVG 194
++++ + G
Sbjct: 569 YGCMVDLLGRAG 580
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/578 (41%), Positives = 354/578 (61%), Gaps = 15/578 (2%)
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD--FEALGMFANMLKDSSLKPDKF 279
+H LD A F+QM +R+ +WN++I G+S++ D A+ +F M+ D ++P++F
Sbjct: 70 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA-----QK 334
T S L ACA K++ GKQIH ++ F V + L+ Y G ++ A +
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 335 IVEQSGISYLN-------VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
I+E+ + + ++ + ++DGY+++GD AR +FD +R R VV+W M+ GY
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
NG KDAVE+FR M + +PN TL ++L S L SL+ G+ +H A SG
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ +ALI MYSK G I A VF + R+ ++W++MI A HG +AI F +M +
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G++P + Y+ +LTAC+HGGLVE+G+RY++ M +V ++P H+ MVDLLGR+GLL
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA FI NMP++PD V W +LL ACR+ N+++GK A L+ + P +SGAY AL N+Y+
Sbjct: 429 EAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G W + + +R MK ++K G S + I +H F VED HP+ I + + +I D
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISD 548
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+++ G+ P T VL ++EE+ KE +L +HSEK+A AFGLIST +RI+KNLR+C D
Sbjct: 549 KLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICED 608
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CHS+IK I K+ R+I VRD RFHHF+ G CSC DYW
Sbjct: 609 CHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 210/443 (47%), Gaps = 30/443 (6%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN--AIRMFVEMVQDQ-VLPTQFTVTSV 151
LD A ++FN MP R+ SW TII ++E K AI +F EM+ D+ V P +FT SV
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF-------- 203
L +C G + GK++H +K G G V ++L+ MY G A+ +F
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 204 ------DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
R + WNV++ ++ G AR FD+M +R VV+WN+MI+GYS NG+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+A+ +F M K ++P+ TL S L A + L L+LG+ +H Y + +G+
Sbjct: 255 FKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
ALI Y+K G +E A + E+ + NVI ++ +++G+ G G A F +R V
Sbjct: 314 ALIDMYSKCGIIEKAIHVFER--LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 378 ----VAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGK 432
VA+ +L GL ++ F MV +G +P M+ + LD +
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI--HWRQETVSWTSMIVALA 490
+ L + AL+ GN+ +RV N++ ++ ++ ++ A
Sbjct: 432 EF---ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Query: 491 QHGLGEEAIQLFERMLELGIKPD 513
G E ++ RM E I+ D
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKD 511
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 182/404 (45%), Gaps = 56/404 (13%)
Query: 9 LISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
+ P F + +L++ K+ GK +H +K G F+ ++L+ Y + A
Sbjct: 123 FVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDA 182
Query: 68 KKVF------DEMPVKT--------LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+ +F +M V T + WN ++ Y + G A +F+ M R VSW
Sbjct: 183 RVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSW 242
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
T+I Y+ G FK+A+ +F EM + + P T+ SVL + + LG L G+ +H +
Sbjct: 243 NTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAED 302
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
+G+ + ++L++MY+K G ++ KA+ H+
Sbjct: 303 SGIRIDDVLGSALIDMYSKCG--IIEKAI------------------HV----------- 331
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
F+++ +V+TW++MI G++ +G +A+ F M + + ++P + L+AC++
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVAYINLLTACSHGGL 390
Query: 294 LKLGKQIHAYIIRTEFDATGPV---GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ G++ + ++ D P ++ + G ++ A++ + I +VI +
Sbjct: 391 VEEGRRYFSQMVSV--DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI-WK 447
Query: 351 TLLDGYIKIGDIGPARRIFDSLRD---RDVVAWTAMLVGYEQNG 391
LL G++ +R+ + L D D A+ A+ Y G
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/683 (37%), Positives = 395/683 (57%), Gaps = 43/683 (6%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A VF +P + + W + + +A++++V M+ +LP FT +L S
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C G+++H V+K G + V SL++MYA+ G A+ VFD ++V S+
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+++ + G ++ A+ FD++ +DVV+WN+MI+GY++ G +AL +F M+K +++
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK-TNV 203
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
KPD+ T+A+ +SACA ++LG+Q+H++I F + + NALI Y+K
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKC-------- 255
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
G++ A + + L ++DV++W ++ GY L K
Sbjct: 256 -------------------------GEVETACELLEGLSNKDVISWNTLIGGYTHMNLYK 290
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA------SALRSGEASSLS 448
+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH + ASSL
Sbjct: 291 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLR 350
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
S LI MY+K G+I+AA +V + + + +W +MI A HG A +F RM +
Sbjct: 351 TS--LIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKN 408
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
GI+PD IT+VG+L+AC+H G+++ G+ + M+ + I P H+ M+DLLG +GL +E
Sbjct: 409 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKE 468
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A I MP+EPD V W SLL AC++H NL+LG+ A+KL+ IEP+N G+Y L N+Y++
Sbjct: 469 AEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYAT 528
Query: 629 CGKWEDAANIRKSMKYVGV-KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
GKW + IR + G+ KK G S ++I + VH F + D LHPQ IY + ++
Sbjct: 529 AGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEV 588
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++E GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 589 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 648
Query: 748 CHSAIKFICKLVDREIVVRDATR 770
CH A K I K+ REI+ RD TR
Sbjct: 649 CHEATKLISKIYKREIIARDRTR 671
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 259/555 (46%), Gaps = 100/555 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G L +++ SL++ YA+ + A+KVFD
Sbjct: 78 FPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSS 137
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ +++ YA +G ++ A ++F+ +P +D VSW +I Y E G +K A+ +F E
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +V+++C G + G++VHS++ G + + N+L+++Y+K G+
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A + +G+ K+V SW N++I GY+
Sbjct: 258 VETACELLEGLSNKDVISW-------------------------------NTLIGGYTHM 286
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI +
Sbjct: 287 NLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--------- 336
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR-D 374
K+ GV + + S L T+L+D Y K GDI A ++ DS +
Sbjct: 337 ---------KLKGVVV-------TNASSLR----TSLIDMYAKCGDIDAAPQVSDSSAFN 376
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
R + W AM+ G+ +G A ++F M + G +P++ T +LS S LD G+ I
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
S R+ +N+ + + MI L GL
Sbjct: 437 FRS----------------------------MRQDYNIT---PKLEHYGCMIDLLGHSGL 465
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP-TPSHF 553
+EA ++ M ++PD + + +L AC G +E G+ + K + KI+P P +
Sbjct: 466 FKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELGESF---AKKLIKIEPENPGSY 519
Query: 554 ASMVDLLGRAGLLQE 568
+ ++ AG E
Sbjct: 520 VLLSNIYATAGKWNE 534
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVF----LKNSLMNF 57
ETPN +++S L AHL + +G+ +H I K + V L+ SL++
Sbjct: 304 ETPNDVTMLSILPACAHLGAID-------IGRWIHVYIDKKLKGVVVTNASSLRTSLIDM 356
Query: 58 YAKTESISYAKKVFDEMPV-KTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVS 112
YAK I A +V D ++L +WN ++ +A GR + A ++F+ M D ++
Sbjct: 357 YAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDIT 416
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQD 139
+ ++ + G +F M QD
Sbjct: 417 FVGLLSACSHSGMLDLGRNIFRSMRQD 443
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 270/768 (35%), Positives = 410/768 (53%), Gaps = 97/768 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCG-LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LLQS +++ G+ +HA +I L + +L L FYA +S A+ +FD + +K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
WN ++ YA G +P + V ++ EM+
Sbjct: 125 NSFLWNFMIRGYASNG-----------LPMKSLV--------------------LYREML 153
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
FT VL +C L + G++VHS VV GL + V NSLL MYAK GD
Sbjct: 154 CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGD-- 211
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+ AR FD+M ERD+ +WN+MI+GY++N
Sbjct: 212 -----------------------------MGTARMVFDRMAERDLTSWNTMISGYAKNAD 242
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
A +F +++ + L D TL LSACA+L+ +K GK IH Y +R +GN
Sbjct: 243 SGTAFLVF-DLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNS------IGN 295
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
N +L++ Y + ARR+F+ +R +D
Sbjct: 296 --------------------------YNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDT 329
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V+W +M++GY +NG +++ LFR M +G P+ T A+L +A+L +G IH+
Sbjct: 330 VSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSY 389
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
++ G ++ V AL+ MYSK G++ +RRVF+ + + VSW++M+ HG G E
Sbjct: 390 LVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMP-DKSLVSWSAMVAGYGLHGRGRE 448
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
AI + + M + PD+ + +L+AC+H GLV +G+ + M+ + +KP SH++ MV
Sbjct: 449 AISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMV 508
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGRAG L EAY I M ++P W +LL+A R+HKN+ L +I+A+K+ + P
Sbjct: 509 DLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVS 568
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
+Y L N+Y++ +W+D +R ++ G+KK+ G S++++ N VH F V D H Q +
Sbjct: 569 SYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTED 628
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ ++KE G+ PDT+ V +DVEE+VKE+ML HSE+LAIAF LI+T T +R
Sbjct: 629 IYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIR 688
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLRVC DCH+ K I +L REI++RD RFHHF KG CSC DYW
Sbjct: 689 ITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/566 (40%), Positives = 352/566 (62%), Gaps = 36/566 (6%)
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ G + AR FD+M RDVV+W +IAGY+QN EA+G+ +ML+ + +P+ F
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLR-ARFRPNGF 59
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T S L A +G+Q+HA ++ +D VG+AL+ YA+ EQ
Sbjct: 60 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARC----------EQM 109
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
++ + +FD L ++ V+W A++ G+ + + +
Sbjct: 110 DMAIM-----------------------VFDRLVSKNEVSWNALIAGFARKADGETTLMK 146
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M R G ++T S+M S + + +L+ G+ +HA ++SG+ + V N ++ MY+K
Sbjct: 147 FAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAK 206
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+G++ AR+VF+ + +++ V+W +M+ ALAQ+GLG+EA+ FE + + GI+ + IT++
Sbjct: 207 SGSMVDARKVFDRMD-KRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLS 265
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
VLTAC+HGGLV++G+ Y++MMK+ + ++P H+ S VDLLGRAGLL+EA F+ MP+E
Sbjct: 266 VLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME 324
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
P WG+LL ACR+HKN +G+ AA+ + ++PD++G L N+Y+S GKW DAA +R
Sbjct: 325 PTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVR 384
Query: 640 KSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTA 699
K MK GVKK SWVQI+N VH+F +D HP+ IY +I IK+ G+VP+TA
Sbjct: 385 KMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTA 444
Query: 700 SVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLV 759
VL + E +E L++HSEK+A+AF LI+ P ++RIMKN+R+C DCHSA K++ K+
Sbjct: 445 HVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVF 504
Query: 760 DREIVVRDATRFHHFKKGLCSCRDYW 785
REIVVRD RFHHF +G CSC DYW
Sbjct: 505 KREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 154/345 (44%), Gaps = 65/345 (18%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y K G + A VF+ MP+RD VSWT +I Y + AI + +M++ + P FT
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
TS+L + A G S G+++H+ VK V V ++LL+MYA+ MA VFD +
Sbjct: 62 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
KN S WN++IAG+++ L FA M
Sbjct: 122 KNEVS-------------------------------WNALIAGFARKADGETTLMKFAEM 150
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ FT +S SA A + L+ G+ +HA++I++ T VGN ++ YAK G
Sbjct: 151 QRN-GFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSG- 208
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+++D AR++FD + RD+V W ML
Sbjct: 209 ----------------------SMVD----------ARKVFDRMDKRDLVTWNTMLTALA 236
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
Q GL K+AV F + + G + N T ++L+ S + GK
Sbjct: 237 QYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKH 281
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 125/243 (51%), Gaps = 8/243 (3%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ +L YA+ ++D+A VF+ + +++ VSW +I + + + F EM ++
Sbjct: 97 SALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFG 156
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T FT +S+ ++ +G L G+ VH+ ++K+G V N++L MYAK G + A+ V
Sbjct: 157 ATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKV 216
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYD 258
FD M +++ +WN +++ G A A F+++ I+ + +T+ S++ S G
Sbjct: 217 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 276
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E F +M+KD +++P+ + +S L + L K+ ++ + + T V A
Sbjct: 277 KEGKHYF-DMMKDYNVQPE---IDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGA 332
Query: 319 LIS 321
L+
Sbjct: 333 LLG 335
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +IK G L+ F+ N+++ YAK+ S+ A+KVFD M + L +WNT+L+A A+
Sbjct: 178 GRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQ 237
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +G K A+ F E+ + + Q T SV
Sbjct: 238 YG-----------------------------LG--KEAVAHFEEIRKCGIQLNQITFLSV 266
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
L +C+ G + GK + + ++ S +++ + G
Sbjct: 267 LTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAG 309
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/601 (39%), Positives = 365/601 (60%), Gaps = 20/601 (3%)
Query: 201 AVFDGMRLKNVS----------SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
A+F+GM L V+ + ++ GR++ AR FD+M RDVVTWN+MI
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
Y + G EA +F M KDS++ PD+ L + +SAC ++ + I+ ++I +
Sbjct: 186 RYCRFGLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR 244
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ AL++ YA G +++A++ + +S N+ T ++ GY K G + A+ IFD
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRK--MSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+D+V WT M+ Y ++ ++A+ +F M G KP+ ++ +++S ++L LD
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
K +H+ +G S LS++NALI MY+K G ++A R VF + R+ VSW+SMI AL+
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALS 421
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG +A+ LF RM + ++P+ +T+VGVL C+H GLVE+G++ + M + + I P
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+ MVDL GRA LL+EA IE+MP+ +VV WGSL+SACR+H L+LGK AA+++L
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EPD+ GA + N+Y+ +WED NIR+ M+ V K +G S + K H F + D
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
H Q + IY K+ ++ ++K G+VPD SVL DVEE+ K+ ++ HSEKLA+ FGL++
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661
Query: 731 PENT------TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+ +RI+KNLRVC DCH K + K+ +REI+VRD TRFH +K GLCSCRDY
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721
Query: 785 W 785
W
Sbjct: 722 W 722
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 241/522 (46%), Gaps = 57/522 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+PP I + L+ +S P L + RI G L F +F ++
Sbjct: 71 PSPPESI----VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQF------SFLPILKA 120
Query: 64 ISYAKKVFDEMP-------VKTLCS---WNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+S +F+ M + TLC + YA GR++ A VF+ M +RD V+W
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
T+I Y G A ++F EM V+P + + +++++C G++ + ++ F+++
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
+ ++ +L+ MYA G MA+ F M ++N+ +VS + GRLD A+
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FDQ ++D+V W +MI+ Y ++ Y EAL +F M S +KPD ++ S +SACANL
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC-SGIKPDVVSMFSVISACANLGI 359
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L K +H+ I ++ + NALI+ YAK GG++
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD----------------------- 396
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
R +F+ + R+VV+W++M+ +G DA+ LF M +E +PN
Sbjct: 397 ----------ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEV 446
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNL 472
T +L S ++ GK+I AS + L ++ ++ +A + A V
Sbjct: 447 TFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
+ V W S++ A HG E +R+LEL +PDH
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL--EPDH 546
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 396 AVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
A LF +R G + + ++ +L S +++L G ++H A + V +
Sbjct: 94 ATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFM 153
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+ G IN AR VF+ + R + V+W +MI + GL +EA +LFE M + + PD
Sbjct: 154 DMYASCGRINYARNVFDEMSHR-DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE 212
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+ +++AC G + + Y + + ++ ++V + AG + A F
Sbjct: 213 MILCNIVSACGRTGNMRYNRAIYEFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 575 NMPL 578
M +
Sbjct: 272 KMSV 275
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 9/227 (3%)
Query: 408 PKPNNYTLS-AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P T + +L S SL+H KQ+HA LR+ L+ +++ S + N++ A
Sbjct: 4 PPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYA 63
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
VF+ I E++ + + L++ I ++R+ +G + D +++ +L A +
Sbjct: 64 LNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSK 123
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ +G + + + + P +D+ G + A N + M DVV W
Sbjct: 124 VSALFEGMELHGVAFKIATL-CDPFVETGFMDMYASCGRINYARNVFDEMS-HRDVVTWN 181
Query: 587 SLLSA-CRVHKNLDLGKIAAE-KLLLIEPDNSGAYSALCNLYSSCGK 631
+++ CR + K+ E K + PD LCN+ S+CG+
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDE----MILCNIVSACGR 224
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/719 (35%), Positives = 407/719 (56%), Gaps = 37/719 (5%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKN-AIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
+FN + N ++ +W TI+ + + + A+ + + P +T +L C A
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARV 119
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
G+++H+ V +G G V V N+L+N+YA G A+ VF+ + ++ SWN +++
Sbjct: 120 SEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLA 179
Query: 220 LHIHSGRLDLARAQFDQMIER---------------------------------DVVTWN 246
++ +G ++ A F+ M ER D+V+W+
Sbjct: 180 GYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWS 239
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+M++ Y QN EAL +F M K S + D+ + S LSAC+ + +++G+ +H ++
Sbjct: 240 AMVSCYEQNEMGEEALVLFVEM-KGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVK 298
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ + NALI Y+ G + A++I + G L++I++ +++ GY++ G I A
Sbjct: 299 VGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGG-ELLDLISWNSMISGYLRCGSIQDAE 357
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+F S+ ++DVV+W+AM+ GY Q+ +A+ LF+ M G +P+ L + +S + LA
Sbjct: 358 MLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLA 417
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+LD GK IHA R+ ++ +S LI MY K G + A VF + + +W ++I
Sbjct: 418 TLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVI 476
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
+ LA +G E+++ +F M + G P+ IT++GVL AC H GLV G+ Y+N M + HKI
Sbjct: 477 LGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKI 536
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+ H+ MVDLLGRAGLL+EA I++MP+ PDV WG+LL ACR H++ ++G+
Sbjct: 537 EANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGR 596
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL+ ++PD+ G + L N+Y+S G W + IR M GV KT G S ++ VH F
Sbjct: 597 KLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFL 656
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
D HPQ + I + + + ++K G+VP T+ V D++E+ KE L HSEKLA+AFG
Sbjct: 657 AGDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFG 716
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LI+ T +R+ KNLR+CNDCH+ +K I K DR+IVVRD RFHHFK G CSC D+W
Sbjct: 717 LITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 259/536 (48%), Gaps = 75/536 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LLQ + F G+ +HA + G V+++N+LMN YA S+ A++VF+E P
Sbjct: 108 YPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESP 167
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMP----------------------------- 106
V L SWNT+L+ Y + G ++ A VF MP
Sbjct: 168 VLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNG 227
Query: 107 ----NRDSVSWTTIIVTY--NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
RD VSW+ ++ Y NE+G + A+ +FVEM V + V S L++C+ + +
Sbjct: 228 VRGRERDMVSWSAMVSCYEQNEMG--EEALVLFVEMKGSGVAVDEVVVVSALSACSRVLN 285
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF-DGMRLKNVSSWNVVVS 219
+ G+ VH VK G+ V++ N+L+++Y+ G+ + A+ +F DG L ++ SWN ++S
Sbjct: 286 VEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMIS 345
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ G + A F M E+DVV+W++MI+GY+Q+ EAL +F M + ++PD+
Sbjct: 346 GYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM-QLHGVRPDET 404
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
L S +SAC +L L LGK IHAYI R + + LI Y K G VE A +
Sbjct: 405 ALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALE----- 459
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
+F ++ ++ V W A+++G NG + ++ +
Sbjct: 460 ----------------------------VFYAMEEKGVSTWNAVILGLAMNGSVEQSLNM 491
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYS 458
F M + G PN T +L + ++ G+ S + + +++ ++ +
Sbjct: 492 FADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLG 551
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
+AG + A + + + + +W +++ A +H E +L ++++L +PDH
Sbjct: 552 RAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQL--QPDH 605
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/637 (38%), Positives = 358/637 (56%), Gaps = 67/637 (10%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
S+L SC + GK++H+ + + G+S + L+N+Y
Sbjct: 5 ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCIC--------------- 49
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
N + + H+ FD++ +R++ WN MI GY+ NG A+ ++ M
Sbjct: 50 ------NSLTNAHL----------LFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQM 93
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+D L PDKFT L AC+ L ++ GK+IH +IR+ ++ VG ALI
Sbjct: 94 -RDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALI-------- 144
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
D Y K G + AR++FD + +RDVV W +ML Y
Sbjct: 145 -------------------------DMYAKCGCVESARQVFDKIDERDVVCWNSMLATYS 179
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QNG +++ L R M G KP T ++ S+ L GK++H + R G S+
Sbjct: 180 QNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDK 239
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V AL+ MY+K+G++N AR +F L+ + VSW +MI A HG EA+ LF+ M +
Sbjct: 240 VKTALMDMYAKSGSVNVARSLFELLE-EKRVVSWNAMITGYAMHGHANEALDLFKEM-KG 297
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+ PDHIT+VGVL AC+HGGL+ +G+ ++ M + I PT H+ M+DLLG G L+E
Sbjct: 298 KVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEE 357
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
AY I M +EPD WG+LL +C++H N+++G++A EKL+ +EPD+ G Y L N+Y+
Sbjct: 358 AYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQ 417
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
GKW+ A +R M G+KK+ SW+++ NKVH F ED HP+ +AIY ++ +
Sbjct: 418 AGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKL 477
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+KE G+ P SV HDVE+D K M+ HSE+LAIAFGLIST T L I+KNLR+C DC
Sbjct: 478 MKEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDC 537
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H AIKFI K+ +REI +RD R+HHFK G+CSC D+W
Sbjct: 538 HVAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 225/522 (43%), Gaps = 131/522 (25%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
+ +YA LLQS + + GK +HARI + G+ + L L+N Y S++ A +FD
Sbjct: 1 MSYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFD 60
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
+ + L WN ++ YA W G ++ AI +
Sbjct: 61 RISKRNLFLWNVMIRGYA----------------------WN---------GPYELAISL 89
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
+ +M ++P +FT VL +C+AL + GKK+H V+++GL V V +L++MYAK
Sbjct: 90 YYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAK 149
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G A+ VFD + ++V W NSM+A Y
Sbjct: 150 CGCVESARQVFDKIDERDVVCW-------------------------------NSMLATY 178
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
SQNG E+L + ++ + LKP + T +++A A+ L GK++H Y R F++
Sbjct: 179 SQNGQPDESLAL-CRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESN 237
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V AL+ YAK G V + AR +F+ L
Sbjct: 238 DKVKTALMDMYAKSGSVNV---------------------------------ARSLFELL 264
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
++ VV+W AM+ GY +G +A++LF+ M + P++ T +L+ S L+ GK
Sbjct: 265 EEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGLLNEGK 323
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+H ++ S FN+ Q +T MI L
Sbjct: 324 -MHFRSMISD---------------------------FNIWPTVQH---YTCMIDLLGHC 352
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
G EEA +L ++E+ ++PD + +L +C G VE G+
Sbjct: 353 GRLEEAYKL---IMEMRVEPDAGVWGALLHSCKIHGNVEMGE 391
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 45/314 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H +I+ GL VF+ +L++ YAK + A+
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESAR----------------------- 157
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+VF+ + RD V W +++ TY++ G+ ++ + M + + PT+ T
Sbjct: 158 --------QVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVIS 209
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+A+ G L GK++H + + G V +L++MYAK G +A+++F+ + K V
Sbjct: 210 IAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRV 269
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM---IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
SWN +++ + G + A F +M + D +T+ ++A S G E F +M
Sbjct: 270 VSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSM 329
Query: 269 LKDSSLKP--DKFT-LASTLSACANLEK-LKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
+ D ++ P +T + L C LE+ KL + +R E DA G G L SC
Sbjct: 330 ISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIME-----MRVEPDA-GVWGALLHSCKI 383
Query: 325 KVGGVEIAQKIVEQ 338
G VE+ + +E+
Sbjct: 384 H-GNVEMGELALEK 396
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 135/315 (42%), Gaps = 60/315 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H + G + +K +LM+ YAK+ S++ A+ +F+ + K + SWN +++ YA
Sbjct: 222 GKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAM 281
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A ++F M + +VLP T V
Sbjct: 282 HGHANEALDLFKEM--------------------------------KGKVLPDHITFVGV 309
Query: 152 LASCTALGDLSAGK-KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
LA+C+ G L+ GK S + + V ++++ G A + MR++
Sbjct: 310 LAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEP 369
Query: 210 NVSSWNVVV-SLHIHSGRLDLARAQFDQMIE---RDVVTWNSMIAGYSQNGYDFEALGMF 265
+ W ++ S IH G +++ ++++E D + + Y+Q G ++ +
Sbjct: 370 DAGVWGALLHSCKIH-GNVEMGELALEKLVELEPDDGGNYVILSNMYAQAG-KWDGVARL 427
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+++ + LK AC+ +E +G ++HA++ D + P A+ + +
Sbjct: 428 RDLMMNKGLKKS--------IACSWIE---VGNKVHAFLSE---DTSHPKSEAIYAELKR 473
Query: 326 VGGVEIAQKIVEQSG 340
G K+++++G
Sbjct: 474 TG------KLMKEAG 482
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/755 (34%), Positives = 404/755 (53%), Gaps = 90/755 (11%)
Query: 32 GKLVHAR-IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+L AR + + + + N LM Y K + + A+++FD MPV+ SWNT++S YA
Sbjct: 155 GRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYA 214
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G L A +F P RD +WT ++ Y + G A R+F EM
Sbjct: 215 RDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEM-------------- 260
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
GK+ ++ N ++ Y + MA+ +F+ M +N
Sbjct: 261 ------------PGKREMAY-------------NVMIAGYVQYKKMDMARELFEAMPCRN 295
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SWN ++S + +G + AR FD M +RD V+W ++IAGY+Q G+ + + M M +
Sbjct: 296 VGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKR 355
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D ++ T LS CA + L LGKQ+H ++T +D VGNAL
Sbjct: 356 DGK-SLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNAL----------- 403
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
L+ Y K G IG A +F+ ++ +D+++W ML GY ++
Sbjct: 404 ----------------------LEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARH 441
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G + A+ +F SM G KP+ T+ ++ ++ L + G ++L + ++ S
Sbjct: 442 GFGRQALLVFDSMKTAGFKPDEITM--LIWSNNRLRKV--GNTWVPTSLMNPLGNTWVTS 497
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ +T + +N R +V T ++V ++ + A LF L +
Sbjct: 498 TS-VTEKQEERRVN-----------RIGSVCITFLLVIISAYKYRLHACHLFPCNWLLSL 545
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
I VGVL AC+H GL ++G Y+ M + I P H+ M+DLLGRAGLL+EA+
Sbjct: 546 YLTCIHNVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAH 605
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
N + NMP EPD WG+LL A R+H N +LG+ AAE + +EP+N+G Y L NLY++ G
Sbjct: 606 NLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLG 665
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KW D +R M+ +G++K G+SWV++QNK+H F V D HP++D IY + +I ++K
Sbjct: 666 KWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMK 725
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
G V VLHDVEE+ K++ML++HSEKLA+AFG+++ P +R+MKNLRVC DCH+
Sbjct: 726 HEGHVSLVKLVLHDVEEEEKKRMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCEDCHN 785
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK+I K+V R I++RD+ RFH+ +G+CSC DYW
Sbjct: 786 VIKYISKIVGRLIILRDSHRFHYVSEGICSCGDYW 820
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 214/446 (47%), Gaps = 48/446 (10%)
Query: 164 GKKVHSF---VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
GK +H+F V K + V TNS+ + + + G +A VFD M KN+ SWN++++
Sbjct: 30 GKHLHNFCFPVQKARDTYIVKCTNSI-STHMRNGHCHLALRVFDSMPYKNLFSWNLMLTG 88
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
++ + RL AR FD M ++D V+WN M++GY ++G EA +F NM S+ +
Sbjct: 89 YVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWN--G 146
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L + LE+ + + ++ D N L+ Y K + A+++ +
Sbjct: 147 LLAVYVQNGRLEEAR-------RLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMP 199
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+ N I++ T++ GY + GD+ ARR+F+ RDV WTAM+ Y Q+G+ +A +F
Sbjct: 200 VR--NAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVF 257
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M P + M++ +D +++ + ++ N +I+ Y +
Sbjct: 258 DEM----PGKREMAYNVMIAGYVQYKKMDMAREL----FEAMPCRNVGSWNTIISGYGQN 309
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G+I AR +F+++ R + VSW ++I AQ G E+ + + +M G + T+
Sbjct: 310 GDIAQARELFDMMTQR-DCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCA 368
Query: 521 LTAC-----------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
L+ C HG V+ G ++ N +++++ + G + EA
Sbjct: 369 LSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGN------------ALLEMYCKCGSIGEA 416
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVH 595
Y+ E M L+ D+++W ++L+ H
Sbjct: 417 YDVFERMQLK-DIISWNTMLAGYARH 441
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH + +K G + N+L+ Y K SI A VF+ M +K + SWNT+L+ YA
Sbjct: 380 LGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYA 439
Query: 91 KQGRLDLACEVFNLM 105
+ G A VF+ M
Sbjct: 440 RHGFGRQALLVFDSM 454
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/703 (35%), Positives = 398/703 (56%), Gaps = 45/703 (6%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLP 143
+++ + + R+D A VF+ + D +T +I Y RF +A+++F EM V+D V
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVV-- 58
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+ S++ C DL+ +K+ + + V +++N + + G +A+ +F
Sbjct: 59 ---SWNSMIKGCFDCADLTMARKLFDEMPERS----VVSWTTMINGFLQFGKIEVAEGLF 111
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
M +++++WN ++ + +GR++ F +M R+V++W SMI G Q+G EALG
Sbjct: 112 YKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALG 171
Query: 264 MFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M+ +KP T ++ACAN L G QIHA++ + + + ALI+
Sbjct: 172 LFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITF 231
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA +E + R+F +VV WTA
Sbjct: 232 YANCKQME---------------------------------DSLRVFHGKLHMNVVIWTA 258
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY N ++DA+++F M+REG PN + ++ L+ L +LD G++IH +A++ G
Sbjct: 259 LVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLG 318
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + V N+LI MY + GN+N +F I ++ VSW S+IV AQHG G A+ F
Sbjct: 319 LETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIVGCAQHGCGMWALAFF 377
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M+ ++PD IT+ G+L+AC+H G+ ++G+ + + H+A MVD+LGR
Sbjct: 378 NQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGR 437
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+G L+EA I NMP++ + + W LLSAC +H L++ + AA+ ++ +EP S AY L
Sbjct: 438 SGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLL 497
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
NLY+S +W D + IR+ MK G+ K G SW+ I+ + F D HP D IY K+
Sbjct: 498 SNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKL 557
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ ++KE+G+VPD LHDVE++ KE ML +HSE+LAI FGLIST E +T+ +MKNL
Sbjct: 558 EWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNL 617
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHSAIK I K+V R+I+VRD+TRFHHF G CSC DYW
Sbjct: 618 RVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 202/450 (44%), Gaps = 70/450 (15%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV +++N + + I A+ +F +MP + + +WN+++ Y GR++ +F MP
Sbjct: 87 SVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMP 146
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QVLPTQFTVTSVLASCTALGDLSAG 164
R+ +SWT++I ++ GR + A+ +F +M+ +V PT T V+ +C L G
Sbjct: 147 CRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQG 206
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
++H+ V K G S ++ +L+ YA K + D SL +
Sbjct: 207 VQIHAHVFKLGYSFDAYISAALITFYAN------CKQMED--------------SLRVFH 246
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G+L + +VV W +++ GY N +AL +F M+++ L P++ + S
Sbjct: 247 GKLHM-----------NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL-PNQSSFTSA 294
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L++C LE L G++IH ++ + VGN+LI Y + G
Sbjct: 295 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCG----------------- 337
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
L DG + IF + +++V+W +++VG Q+G A+ F MV
Sbjct: 338 ------NLNDGVV----------IFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMV 381
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQI--HASALRSGEASSLSVSNALITMYSKAGN 462
R +P+ T + +LS S G+ + + S +S E L ++ + ++G
Sbjct: 382 RSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEV-KLDHYACMVDILGRSGK 440
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ A + + + ++ W ++ A H
Sbjct: 441 LEEAEELIRNMPVKANSMVWLVLLSACTMH 470
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 63/275 (22%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ G +HA + K G ++ +L+ FYA + + + +VF
Sbjct: 204 YQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF------------------ 245
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G+L + + V WT ++ Y + ++A+++F EM+++ VLP Q + T
Sbjct: 246 --HGKLHM-----------NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFT 292
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S L SC L L G+++H+ VK GL V V NSL+ MY + G+ +F + K
Sbjct: 293 SALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK 352
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
N+ SW NS+I G +Q+G AL F M+
Sbjct: 353 NIVSW-------------------------------NSVIVGCAQHGCGMWALAFFNQMV 381
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+ S ++PD+ T LSAC++ + G+ + Y
Sbjct: 382 R-SMVEPDEITFTGLLSACSHSGMSQKGRCLFKYF 415
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 266/755 (35%), Positives = 403/755 (53%), Gaps = 101/755 (13%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +HA +++ GL +L N ++ F + +Y+ ++ D+ + +NT++
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG---- 82
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
+ N+ F+ +I ++ M ++ + P FT VL
Sbjct: 83 -------------------------LVLNDC--FQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C + D G K+HS VVK G V SL+N+Y K G
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCG------------------ 157
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+D A FD + +++ +W + I+GY G EA+ MF +L +
Sbjct: 158 -------------FIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL-EM 203
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
L+PD F+L LSAC L+ G+ I YI N ++
Sbjct: 204 GLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITE----------NGMVR----------- 242
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
NV T L+D Y K G++ AR +FD + ++++V+W++M+ GY NGL
Sbjct: 243 ------------NVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGL 290
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA--SSLSVS 450
K+A++LF M+ EG KP+ Y + +L + L +L+ G AS L +G + +
Sbjct: 291 PKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDW--ASNLINGNEFLDNSVLG 348
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
ALI MY+K G ++ A VF + +++ V W + I LA G ++A+ LF +M + GI
Sbjct: 349 TALIDMYAKCGRMDRAWEVFRGMR-KKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGI 407
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KPD T+VG+L ACTH GLVE+G+RY+N M+ V + P H+ MVDLLGRAG L EA+
Sbjct: 408 KPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAH 467
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
I++MP+E + + WG+LL CR+H++ L ++ +KL+ +EP +SG Y L N+Y++
Sbjct: 468 QLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASH 527
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KWE+AA IR M GVKK G+SW+++ VH F V D HP + IY K+ ++ ++K
Sbjct: 528 KWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLK 587
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
G+VP T VL D+EE+ KE + HSEKLA+AFGLIST N + ++KNLRVC DCH
Sbjct: 588 AAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHE 647
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
AIK I ++ REI+VRD RFH F GLCSC+DYW
Sbjct: 648 AIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 215/509 (42%), Gaps = 104/509 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+SP F + +L++ + + +G +H+ ++K G F+K SL+N Y K I A
Sbjct: 104 LSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAF 163
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
KVFD++P K SW +S Y +G+ +
Sbjct: 164 KVFDDIPDKNFASWTATISGYVG-------------------------------VGKCRE 192
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
AI MF +++ + P F++ VL++C GDL +G+ + ++ + G+ V V +L++
Sbjct: 193 AIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVD 252
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y K G+ A++VFDGM KN +V+W+SM
Sbjct: 253 FYGKCGNMERARSVFDGMLEKN-------------------------------IVSWSSM 281
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I GY+ NG EAL +F ML + LKPD + + L +CA L L+LG I E
Sbjct: 282 IQGYASNGLPKEALDLFFKMLNE-GLKPDCYAMVGVLCSCARLGALELGDWASNLINGNE 340
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
F +G ALI YAK G ++ A + +
Sbjct: 341 FLDNSVLGTALIDMYAKCGRMDRAWE---------------------------------V 367
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F +R +D V W A + G +G KDA+ LF M + G KP+ T +L + +
Sbjct: 368 FRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLV 427
Query: 429 DHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ G++ ++ + ++ + +AG ++ A ++ + + W +++
Sbjct: 428 EEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLG 487
Query: 488 ALAQHGLGEEAIQLFERMLE--LGIKPDH 514
H QL E +L+ + ++P H
Sbjct: 488 GCRLH----RDTQLVEVVLKKLIALEPWH 512
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 101/258 (39%), Gaps = 45/258 (17%)
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ L H K IHA+ LR G + N ++ GN N + R+ + +
Sbjct: 19 GFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTK-EPNIFLFN 77
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI L + +E+I+++ M + G+ PD T+ VL AC E G + +++ V
Sbjct: 78 TMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSL---V 134
Query: 544 HKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMP------------------------ 577
K F S+++L + G + A+ +++P
Sbjct: 135 VKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAI 194
Query: 578 ----------LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL---LIEPDNSGAYSALCN 624
L PD + +LSAC+ +L G+ E + ++ N +AL +
Sbjct: 195 DMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVR--NVFVATALVD 252
Query: 625 LYSSCGKWEDAANIRKSM 642
Y CG E A ++ M
Sbjct: 253 FYGKCGNMERARSVFDGM 270
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/650 (37%), Positives = 371/650 (57%), Gaps = 75/650 (11%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++ PT + + +C +L +K+H + + G + NSL+++Y K G + A
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEA 105
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
VFD +M ++D+V+W S+IAGY+QN
Sbjct: 106 HKVFD-------------------------------KMRKKDMVSWTSLIAGYAQNDMPA 134
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EA+G+ MLK KP+ FT AS L A +G QIHA ++ ++ VG+AL
Sbjct: 135 EAIGLLPGMLK-GRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSAL 193
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
LD Y + G + A +FD L ++ V+
Sbjct: 194 ---------------------------------LDMYARCGKMDMATAVFDKLDSKNGVS 220
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + G + A+ +F M R G + ++T S++ S + + +L+ GK +HA +
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMV 280
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+S + + V N ++ MY+K+G++ AR+VF + ++ V+W SM+ A AQ+GLG+EA+
Sbjct: 281 KSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYGLGKEAV 339
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
FE M + GI + IT++ +LTAC+HGGLV++G+ Y++M+K + ++P H+ ++VDL
Sbjct: 340 SHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDL 398
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGRAGLL A FI MP+EP WG+LL+ACR+HKN +G+ AA+ + ++PD+SG
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPP 458
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S G W+ AA +RK MK GVKK SWV+I N VH+F D HP+ + IY
Sbjct: 459 VLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIY 518
Query: 680 NKMAKIWDEI----KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
K+WDEI ++ G+VPD VL V+E +E L++HSEK+A+AF LI P T
Sbjct: 519 ----KMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGAT 574
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RIMKN+R+C DCHSA K+I K+ +REIVVRD RFHHF G CSC DYW
Sbjct: 575 IRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 195/477 (40%), Gaps = 96/477 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y + + +S+N + +H + FL NSL++ Y K S+ A KVFD+M
Sbjct: 54 YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW ++++ YA+ D+ E L+P GRFK
Sbjct: 114 KKDMVSWTSLIAGYAQN---DMPAEAIGLLPGMLK-------------GRFK-------- 149
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
P FT S+L + A D G ++H+ VK V V ++LL+MYA+ G
Sbjct: 150 -------PNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGK 202
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MA AVFD + KN SW N++I+G+++
Sbjct: 203 MDMATAVFDKLDSKNGVSW-------------------------------NALISGFARK 231
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G AL +FA M ++ + FT +S S A + L+ GK +HA+++++ T V
Sbjct: 232 GDGETALMVFAEMQRN-GFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFV 290
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN ++ YAK G +++D AR++F+ + ++
Sbjct: 291 GNTMLDMYAKSG-----------------------SMID----------ARKVFERVLNK 317
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V W +ML + Q GL K+AV F M + G N T +L+ S + GK
Sbjct: 318 DLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYF 377
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG +N A + W +++ A H
Sbjct: 378 DMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 158/324 (48%), Gaps = 38/324 (11%)
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L L P + ++ACA + L ++IH ++ + F+ + N+LI Y K G
Sbjct: 42 LDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGS 101
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
V A K +FD +R +D+V+WT+++ GY
Sbjct: 102 VVEAHK---------------------------------VFDKMRKKDMVSWTSLIAGYA 128
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QN + +A+ L M++ KPN +T +++L + + A G QIHA A++ +
Sbjct: 129 QNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVY 188
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V +AL+ MY++ G ++ A VF+ + + VSW ++I A+ G GE A+ +F M
Sbjct: 189 VGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALISGFARKGDGETALMVFAEMQRN 247
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G + H TY + + G +EQG+ + +M+K+ K+ + +M+D+ ++G +
Sbjct: 248 GFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGN--TMLDMYAKSGSMI 305
Query: 568 EAYNFIENMPLEPDVVAWGSLLSA 591
+A E + L D+V W S+L+A
Sbjct: 306 DARKVFERV-LNKDLVTWNSMLTA 328
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 271/777 (34%), Positives = 403/777 (51%), Gaps = 111/777 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L ++ K R+ G+L+H R+ + + S ++N L+ Y S +KVFDEM
Sbjct: 90 YQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEML 149
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+K L VSW +I Y + G + AIR+F +
Sbjct: 150 MKNL-------------------------------VSWVIVISAYAKNGELEKAIRLFSD 178
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + P S+L SC L GK++HS V++ L+ + V ++ NMY + G
Sbjct: 179 MQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCG- 237
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
W L+ A+ FD M ++ VTW ++ GY+Q
Sbjct: 238 ------------------W------------LEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
AL +FA M + ++ D+F + L C LE +G+QIH++I++ ++ V
Sbjct: 268 KKLEVALELFARMAMEG-VELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSV 326
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G T L+D Y+K GDI A R F + +
Sbjct: 327 G---------------------------------TPLVDFYVKCGDIESAYRSFGRISEP 353
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ V+W+A++ G+ Q+G +D +++F S+ EG N++ +++ ++ A+L+ G Q H
Sbjct: 354 NDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAH 413
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A++ G S L +A++TMYSK G ++ ARR F I + V+WT++I A HG
Sbjct: 414 GDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGNA 472
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA+ F RM G++P+ +T++ VLTAC+H GLV + ++Y M + +KPT H+
Sbjct: 473 AEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDC 532
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
M+D RAGLLQEA I MP EPD ++W SLL C H +L LGKIAAE L ++P +
Sbjct: 533 MIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGD 592
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+ Y L NLYS+ GKWE+A ++RK M +KK SW+ ++ +VH F V D HPQ
Sbjct: 593 TAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQT 652
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV-------KEQMLRHHSEKLAIAFGLI 728
+AIY+K+ +E K V D+ L + E+DV KEQ+L HSEKLAIAFGLI
Sbjct: 653 EAIYSKL----EEFK--CSVIDSPVRLLNEEDDVSCSLSARKEQLL-DHSEKLAIAFGLI 705
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ST +N + + KNLR C DCH K + + R+IVVRD+TRFHHFK G CSC DYW
Sbjct: 706 STEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 214/487 (43%), Gaps = 80/487 (16%)
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
+V+ ++ G+ K A EM V T + + +C L L+ G+ +H + +T
Sbjct: 59 LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
+ ++ N LL MY G + + VFD M +KN+ SW +V+S
Sbjct: 119 NPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVIS----------------- 161
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
Y++NG +A+ +F++M + S ++P+ S L +C L+L
Sbjct: 162 --------------AYAKNGELEKAIRLFSDM-QASGIRPNSAVYMSLLQSCLGPSFLEL 206
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
GKQIH+++IR + +A V A+ + Y + G +E A+ + + G+ N + +T L
Sbjct: 207 GKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD--GMDAQNAVTWTGL---- 260
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+VGY Q + A+ELF M EG + + + S
Sbjct: 261 ---------------------------MVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L V L D G+QIH+ ++ G S +SV L+ Y K G+I +A R F I
Sbjct: 294 IVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRIS-E 352
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
VSW+++I +Q G E+ I++F + G+ + Y V AC Q
Sbjct: 353 PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACA-------AQAN 405
Query: 537 YNMMKNVH--KIKPTPSHF----ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
NM H IK + ++MV + + G L A E++ EPD VAW +++S
Sbjct: 406 LNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIIS 464
Query: 591 ACRVHKN 597
H N
Sbjct: 465 GYAYHGN 471
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/711 (36%), Positives = 396/711 (55%), Gaps = 70/711 (9%)
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ LC N ++ Y K R D A VF+ + +++ SWT ++ + E F F M
Sbjct: 10 RFLC--NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGM 67
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ + P + ++ L++CT +++ G+ + ++ TG+ V +L+++Y K+G
Sbjct: 68 LLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHC 127
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A +VF +M RDVV W++M+A Y++NG
Sbjct: 128 TDAASVFL-------------------------------RMSHRDVVAWSAMVAAYARNG 156
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+ EALG+F M D + P+K TL S L ACA+L L+ G +H R E
Sbjct: 157 HPREALGLFRQMDLDG-VAPNKVTLVSGLDACASLGDLRSGALMHQ---RVE-------- 204
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
AQ I QSG V+ T L++ Y K G I A F + +++
Sbjct: 205 ---------------AQGI--QSG-----VVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VVAW+A+ Y +N N+DA+ + M EG PN+ T ++L +++A+L G++IH
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302
Query: 437 S--ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
L G S + V AL+ MYSK GN+ A +F+ I + V W S+I AQHG
Sbjct: 303 RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHGQ 361
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
E+A++LFERM G++P IT+ VL AC+H G+++QG++++ H I P HF
Sbjct: 362 TEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFG 421
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDLLGRAG + ++ + + +MP EP VAW + L ACR ++N+D AAE L ++P
Sbjct: 422 CMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPR 481
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
Y L N+Y+ G+W D A +R++M+ K G SW++++++VH F D HP+
Sbjct: 482 KRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPR 541
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
I+ ++ ++ +K G+VPDT VLHDV+++VKE M+ +HSEKLA+AF L++TPE +
Sbjct: 542 IGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGS 601
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R++KNLRVCNDCH+A KFI KLV+REIVVRD RFH F+ G CSC DYW
Sbjct: 602 PIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 180/389 (46%), Gaps = 37/389 (9%)
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++N N+++ L+ R D A A F + ++V +W M+A +++N DF+ +F
Sbjct: 7 IRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAEN-RDFDRCWLFFR 65
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+ + P + ++ LSAC + ++ +G+ I I+ T + V AL+S Y K
Sbjct: 66 GMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGK-- 123
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+G A +F + RDVVAW+AM+ Y
Sbjct: 124 -------------------------------LGHCTDAASVFLRMSHRDVVAWSAMVAAY 152
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+NG ++A+ LFR M +G PN TL + L +SL L G +H G S +
Sbjct: 153 ARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGV 212
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V AL+ +Y K G I AA F I + V+W+++ A A++ +AI++ RM
Sbjct: 213 VVGTALVNLYGKCGRIEAAAEAFGQI-VEKNVVAWSAISAAYARNDRNRDAIRVLHRMDL 271
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV-HKIKPTPSHFASMVDLLGRAGLL 566
G+ P+ T+V VL AC ++QG+R + + + ++ ++V++ + G L
Sbjct: 272 EGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNL 331
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVH 595
A N + + D+V W SL++ H
Sbjct: 332 ALAGNMFDKIA-HLDLVLWNSLIATNAQH 359
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 130/299 (43%), Gaps = 72/299 (24%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PN +L+S L+ A L +L+S G L+H R+ G+ V + +L+N Y K
Sbjct: 174 APNKVTLVSGLDACASL--GDLRS-----GALMHQRVEAQGIQSGVVVGTALVNLYGKCG 226
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
I A + F ++ K + +W+ I +AYA+ R NRD
Sbjct: 227 RIEAAAEAFGQIVEKNVVAWSAISAAYARNDR------------NRD------------- 261
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS--FVVKTGLSGCV 180
AIR+ M + + P T SVL +C A+ L G+++H V+ GL V
Sbjct: 262 ------AIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDV 315
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V +L+NMY+K G+ +A +FD + LDL
Sbjct: 316 YVLTALVNMYSKCGNLALAGNMFDKI------------------AHLDL----------- 346
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
V WNS+IA +Q+G +AL +F M + L+P T S L AC++ L G++
Sbjct: 347 --VLWNSLIATNAQHGQTEKALELFERM-RLEGLQPTIITFTSVLFACSHAGMLDQGRK 402
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/639 (39%), Positives = 384/639 (60%), Gaps = 48/639 (7%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK-VGDEMMAKAVFDGMR 207
T +A+ GDL+ ++ + + + N LL YA+ +G A+ +FD +
Sbjct: 70 TVAVAAAVRRGDLTGAEEAFASTPRKTTA----TYNCLLAGYARALGRLADARHLFDRIP 125
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ S+N ++S H SG D AR F M RDVV+WN+M++G S++G EA +F
Sbjct: 126 TPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLA 185
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +S+ NA++S +A
Sbjct: 186 MPVRNSVS----------------------------------------WNAMVSGFACSR 205
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A++ ++ + + +T ++ GY+ IG++ A F+++ R++V+W A++ GY
Sbjct: 206 DMSAAEEWF-RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGY 264
Query: 388 EQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+N DA+ LFR+MVRE +PN TLS++L S+L++L GKQIH ++ + +
Sbjct: 265 VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRN 324
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L+V +L++MY K G++++A ++F +H R + V+W +MI AQHG G+EAI LFERM
Sbjct: 325 LTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVVAWNAMISGYAQHGDGKEAINLFERMK 383
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G++P+ IT+V VLTAC H GL + G R + M+ ++ I+P H++ MVDLL RAG L
Sbjct: 384 DEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 443
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+ A + I +MP EP A+G+LL+ACRV+KNL+ ++AA KL+ +P ++GAY L N+Y
Sbjct: 444 ERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIY 503
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ +W+D + +R+ MK V KT G+SW++I+ +H F D LHPQ I+ K+ ++
Sbjct: 504 AGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLA 563
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+ +K MG+VPD VLHDV+E +K QML HSEKLAI+FGLIST TLRI KNLRVC
Sbjct: 564 ERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCG 623
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A K I K+ DREI++RD TRFHHF+ G CSC DYW
Sbjct: 624 DCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 171/359 (47%), Gaps = 49/359 (13%)
Query: 52 NSLMNFYAKT-ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N L+ YA+ ++ A+ +FD +P S+NT+LS + G D A +F MP RD
Sbjct: 101 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 160
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT--SVLASCTALGDLSAGKKVH 168
VSW T++ ++ G + A +F+ M P + +V+ ++++ D+SA ++
Sbjct: 161 VSWNTMVSGLSKSGAVEEAKAVFLAM------PVRNSVSWNAMVSGFACSRDMSAAEE-- 212
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+ G + ++++ Y +G+ + A F+ M ++N+ SWN VV
Sbjct: 213 -WFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVV---------- 261
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AGY +N + +AL +F M+++++++P+ TL+S L C
Sbjct: 262 ---------------------AGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 300
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
+NL L GKQIH + ++ VG +L+S Y K G + A K+ + + +V+A
Sbjct: 301 SNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGE--MHTRDVVA 358
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDV----VAWTAMLVGYEQNGLNKDAVELFRSM 403
+ ++ GY + GD A +F+ ++D V + + A+L GL + F M
Sbjct: 359 WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGM 417
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 38/156 (24%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L L SNL + GK +H +K L ++ + SL++ Y K
Sbjct: 288 PNASTLSSVL-----LGCSNLSALG--FGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 340
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+S A K+F EM + + +WN ++S YA+
Sbjct: 341 LSSACKLFGEMHTRDVVAWNAMISGYAQH------------------------------- 369
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
G K AI +F M + V P T +VL +C G
Sbjct: 370 GDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 405
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 264/757 (34%), Positives = 426/757 (56%), Gaps = 70/757 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++K G+ V++ +L++FY + A+K+F+EMP
Sbjct: 394 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP---------------- 437
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ + VSWT+++V Y++ G + ++ M Q+ V Q T +V
Sbjct: 438 ---------------DHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 482
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+SC L D G +V +++ G V+V NSL++M+
Sbjct: 483 TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMF--------------------- 521
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SS++ V + A FD M E D+++WN+MI+ Y+ +G E+L F + ++
Sbjct: 522 SSFSSV----------EEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF-HWMRH 570
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ + TL+S LS C++++ LK G+ IH +++ D+ + N L++ Y++ G E
Sbjct: 571 LHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 630
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR---DVVAWTAMLVGYE 388
A+ + + ++ ++I++ +++ Y++ G +I L D V W A++ G+
Sbjct: 631 AELVFQ--AMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHA 688
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+N +AV+ ++ ++RE P NY L+ +++LA L+ G+Q+H ++ G S L
Sbjct: 689 ENEEPNEAVKAYK-LIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLH 747
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V+NA + MY K G ++ ++ R +SW +I A A+HG ++A + F ML+L
Sbjct: 748 VTNAAMDMYGKCGEMHDVLKMLPQPINRSR-LSWNILISAFARHGCFQKARETFHEMLKL 806
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G KPDH+T+V +L+AC HGGLV++G YY+ M + P H ++DLLGR+G L
Sbjct: 807 GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSH 866
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI+ MP+ P+ +AW SLL+ACR+H NL+L + AE LL ++P + AY N+ ++
Sbjct: 867 AEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCAT 926
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
GKWED N+RK M +KK SWV++++KVH FG+ + HPQ I K+ ++
Sbjct: 927 SGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKM 986
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
KE G+VPDT+ LHD++E+ KE L +HSE+LA+AFGLI+TPE++TLRI KNLRVC DC
Sbjct: 987 TKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDC 1046
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HS KF+ +V R+IV+RD RFHHF G CSC DYW
Sbjct: 1047 HSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 180/691 (26%), Positives = 308/691 (44%), Gaps = 122/691 (17%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
P+ + P Y +LQ + + G L+H +I G + L L+ FY K +
Sbjct: 25 PTRLDP-SLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIA 83
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLA---------CEV---------------- 101
A+ VFD MP +++ SW ++S Y++ GR + A C V
Sbjct: 84 ARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGKM 143
Query: 102 ------FNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASC 155
F M RD VSW +I Y G ++ MF M++ ++P +T+ SVL +
Sbjct: 144 EDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRAS 203
Query: 156 TALGDLSAGKKVH---------SFVVKTGL------------------------------ 176
G L ++H S+ + TGL
Sbjct: 204 AEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSST 263
Query: 177 --------SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
G + N+L++MYAK G+ AK FD M KNV SW ++S + G
Sbjct: 264 ALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGH 323
Query: 229 LARAQ--FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+A A+ FD+M R+ +W++M++GY + G EA+G+F M ++P+ F +AS ++
Sbjct: 324 MAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMW-GLGVEPNGFMVASLIT 382
Query: 287 ACANLEKL-KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
AC+ + G Q+H ++++T VG AL+ Y +G V AQK+ E+ + N
Sbjct: 383 ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEE--MPDHN 440
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
V+++T+L+ GY G+ G ++ +R +
Sbjct: 441 VVSWTSLMVGYSDSGNPGEVLNVYQRMR-------------------------------Q 469
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
EG N T + + S L G Q+ ++ G S+SV+N+LI+M+S ++
Sbjct: 470 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 529
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A VF+ ++ + +SW +MI A A HGL E+++ F M L + + T +L+ C+
Sbjct: 530 ACYVFDHMN-ECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 588
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
++ G+ + ++ + + +++ L AG ++A + M E D+++W
Sbjct: 589 SVDNLKWGRGIHGLVVKL-GLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISW 646
Query: 586 GSLLSACRVH--KNLDLGKIAAEKLLLIEPD 614
S++ AC V K LD KI AE L + +PD
Sbjct: 647 NSMM-ACYVQDGKCLDGLKILAELLQMGKPD 676
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 195/488 (39%), Gaps = 122/488 (25%)
Query: 262 LGMFANMLKDSSLKPDKFTLA---STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
LG A LK S P + + L C + + K G IH ++I F + +
Sbjct: 11 LGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTK 70
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY---------------------- 356
LI Y KVG V A+ + + G+ +V+++T ++ GY
Sbjct: 71 LIIFYVKVGDVIAARNVFD--GMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 128
Query: 357 ---------IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
K G + A +F ++ +RDVV+W AM+ GY G D+ +FRSM+R G
Sbjct: 129 ANHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 188
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIH-------------------------------- 435
P+ YTL ++L S+ L QIH
Sbjct: 189 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 248
Query: 436 -------------ASALRSGEASS--LSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
++AL +G A ++ NALI MY+K+G I A+R F+ + + +
Sbjct: 249 DLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEME-EKNVI 307
Query: 481 SWTSMIVALAQHGLG---------------------------------EEAIQLFERMLE 507
SWTS+I A+HG G EEA+ LF +M
Sbjct: 308 SWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 367
Query: 508 LGIKPDHITYVGVLTACTHGG-LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
LG++P+ ++TAC+ G + ++G + + + + A +V G GL+
Sbjct: 368 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTA-LVHFYGSIGLV 426
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
A E MP + +VV+W SL+ N G++ + + SG + +
Sbjct: 427 YNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN--PGEVLNVYQRMRQEGVSGNQNTFATVT 483
Query: 627 SSCGKWED 634
SSCG ED
Sbjct: 484 SSCGLLED 491
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/704 (36%), Positives = 414/704 (58%), Gaps = 14/704 (1%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QVLPTQF 146
Y GRL+ A VF+ MP R+ SW II Y G+ + A+ ++ +V+ ++ F
Sbjct: 2 YRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAF 61
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+SVLA+C L L G ++H +VK G+ V + N+L+ MYAK G AK VFD +
Sbjct: 62 IFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRI 121
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
++V SWN +VS + +G L++A + +M+ DV+ W++MI+ + G+D EAL ++
Sbjct: 122 THRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYR 181
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M+ S++P+ TLA+ L+AC L L G + I++ D VG L++ YA+
Sbjct: 182 EMIL--SVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARF 239
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G V A++++ S + V+++ ++ + + + A ++F + D+ V++W AM+ G
Sbjct: 240 GDVIAAREVLFDS-MKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAG 298
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+ QNG K A+ELFR M EG +P+ T ++L ++L + G+ I + A
Sbjct: 299 FGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFI-CDGMDEALAKD 357
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+SV+N++ MY K G AR+ F + +R + VSWT++I A +Q+G EA+ +F M+
Sbjct: 358 ISVANSICNMYGKCGLPELARQTFLEMTYR-DVVSWTAIIAAYSQNGYSSEALDIFRIMV 416
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM--KNVHKIKPTPSHFASMVDLLGRAG 564
+ G++P+ IT + L+AC+HG L ++G ++ + + + + SHF +DLLGRAG
Sbjct: 417 QAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAG 476
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD-LGKIAAEKLLLIEPD--NSGAYSA 621
L++A I MP + VAW SLLSACR ++L G++A L E + Y
Sbjct: 477 YLKDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVM 536
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+S G +R ++ KK G S + I+ + + F D HP+RD YN+
Sbjct: 537 LSNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNE 596
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ +++ ++KE G+VPDT + ++EE+ EQ L +HSEKLA+AFG+++TP +L I+KN
Sbjct: 597 LRRLFQKMKEAGYVPDTR--IAEMEEEETEQSLSYHSEKLALAFGVLNTPPEASLCIVKN 654
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC+DCH+ IKF+ K ++R+I VRDATRFHHF+ G CSCRD W
Sbjct: 655 LRVCSDCHNVIKFLSKHLNRKIAVRDATRFHHFENGFCSCRDCW 698
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 247/465 (53%), Gaps = 48/465 (10%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H RI+K G+ V L+N+L+ YAK I AK+VFD + + + SWN ++SA A+
Sbjct: 79 GLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRDVVSWNAMVSANAE 138
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L++A +++ M + D + W+T+I G + A+ ++ EM+ V P T+ +V
Sbjct: 139 AGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL-SVRPNASTLATV 197
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV-FDGMRLKN 210
LA+CT LGDLS+G V +++GL V +L+N+YA+ GD + A+ V FD M+ +
Sbjct: 198 LAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDRT 257
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SWN +V+ + R+D A F +M ++ V++WN+MIAG+ QNG +AL +F M
Sbjct: 258 VVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRPKQALELFRRMDL 317
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG---PVGNALISCYAKVG 327
+ L+P + T S L ACANL LG+ +I +A V N++ + Y K G
Sbjct: 318 E-GLQPSRMTYCSVLDACANLTASSLGR----FICDGMDEALAKDISVANSICNMYGKCG 372
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
E+A R+ F + RDVV+WTA++ Y
Sbjct: 373 LPELA---------------------------------RQTFLEMTYRDVVSWTAIIAAY 399
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QNG + +A+++FR MV+ G +PN TL LS S A D G I S+L SG+ +
Sbjct: 400 SQNGYSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIF-SSLVSGDYYGV 458
Query: 448 SVSNA----LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ + + I + +AG + A + + ++ V+WTS++ A
Sbjct: 459 TANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGAVAWTSLLSA 503
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 206/435 (47%), Gaps = 69/435 (15%)
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY G A+AVFD M L+N SW +++S ++ +G+
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGK---------------------- 38
Query: 249 IAGYSQNGYDFEALGMFANMLKDSS-LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+ EAL ++ +++ S+ ++ D F +S L+ACA L+ L+ G +IH I++
Sbjct: 39 ---------EQEALCLYRTLVRSSTEIQADAFIFSSVLAACARLKCLEQGLEIHERIVKR 89
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ NAL++ YAK G ++ A+++ ++ I++ +V+++ ++ + G + A +
Sbjct: 90 GVKQDVGLQNALVTMYAKCGRIDRAKQVFDR--ITHRDVVSWNAMVSANAEAGHLEVALK 147
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
I+ + DV+ W+ M+ G +++A+EL+R M+ +PN TL+ +L+ + L
Sbjct: 148 IYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL-SVRPNASTLATVLAACTRLGD 206
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF-------NLIHWR---- 476
L G + A++SG V L+ +Y++ G++ AAR V ++ W
Sbjct: 207 LSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDRTVVSWNAMVT 266
Query: 477 --------------------QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
+ +SW +MI Q+G ++A++LF RM G++P +T
Sbjct: 267 AFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMT 326
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
Y VL AC + G+ + M + S S+ ++ G+ GL + A M
Sbjct: 327 YCSVLDACANLTASSLGRFICDGMDEA--LAKDISVANSICNMYGKCGLPELARQTFLEM 384
Query: 577 PLEPDVVAWGSLLSA 591
DVV+W ++++A
Sbjct: 385 TYR-DVVSWTAIIAA 398
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/754 (34%), Positives = 411/754 (54%), Gaps = 99/754 (13%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +H I+K G S F + L++ Y K I+ A+K+FDEM
Sbjct: 21 KSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEARKLFDEM------------------ 61
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
PNR V+W ++I ++ G+ K AI ++ M+ + VLP +T +++
Sbjct: 62 -------------PNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIF 108
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+ + +G G+K H V G +V D +A + D
Sbjct: 109 KAFSEMGVSREGQKAHGLAVVLGF---------------EVSDGFVATGIVD-------- 145
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
++ G++ AR FD+++++DVV + ++I GY+Q G D EAL +F +M+ S
Sbjct: 146 -------MYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMV-GS 197
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+KP+++TLAS L +C NL L GK IH ++++ ++ +L++ Y+K VE
Sbjct: 198 RIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVE-- 255
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
+ ++F+SL V WT+ +VG QNG
Sbjct: 256 -------------------------------DSIKVFNSLAYASHVTWTSFIVGLVQNGR 284
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+ A+ +FR M+R PN++T S++L SSLA L+ G+QIHA ++ G + V A
Sbjct: 285 EEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAA 344
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI +Y K GN+ AR VF + + VS +MI A AQ+G G EA++LFERM +LG KP
Sbjct: 345 LIHLYGKCGNVEKARSVFESLT-ELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKP 403
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+ +T++ +L AC + GLVE+G + +++++N H I+ T H+ M+DLLGRA +EA
Sbjct: 404 NVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAML 463
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
IE PDV+ W +LL+AC++H +++ + +K+L P + G + L N+Y+S GKW
Sbjct: 464 IEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKW 522
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
++ ++ + + + +KKT SWV I +VH F D HP+ I + ++ +++ +
Sbjct: 523 DNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITL 582
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST-PENTTLRIMKNLRVCNDCHSA 751
G+ PDT VL D+EE+ K L +HSEKLAIAF L T +NT +RI KNLRVC DCHS
Sbjct: 583 GYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSW 642
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IKF+ L R+I+ RDA RFHHFK G+CSC+DYW
Sbjct: 643 IKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 66/345 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GKL+H ++K GL V + SL+ Y+K + + KVF+ + + +W + + +
Sbjct: 222 GKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQ 281
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR ++ A+ MF EM++ + P FT +S+
Sbjct: 282 NGREEI-------------------------------ALSMFREMIRCSISPNHFTFSSI 310
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C++L L AG+++H+ VK G+ G V +L+++Y K G+ A++V
Sbjct: 311 LHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSV--------- 361
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
F+ + E DVV+ N+MI Y+QNG+ EAL +F M K
Sbjct: 362 ----------------------FESLTELDVVSINTMIYAYAQNGFGHEALELFERM-KK 398
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYAKVGGVE 330
KP+ T S L AC N ++ G QI + I + T +I + E
Sbjct: 399 LGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFE 458
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
A ++E+ +VI + TLL+ G++ A + + D+
Sbjct: 459 EAAMLIEEG--KNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQ 501
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/756 (34%), Positives = 398/756 (52%), Gaps = 100/756 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA ++KCG L++ N +L YA
Sbjct: 285 LGRELHAALLKCGSELNI--------------------------------QCNALLVMYA 312
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K GR+D A VF + +D +SW +++ Y + + AI F EM+Q P V S
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ ++ L L+ G++ H++ +K L + V N+L++MY K G
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGS--------------- 417
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
++ + F+ M RD ++W +++A ++Q+ EAL M + K
Sbjct: 418 ----------------IECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQK 461
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ + D + S L C L+ + L KQ+H Y IR N L
Sbjct: 462 EG-IMVDSMMIGSILETCCGLKSISLLKQVHCYAIR----------NGL----------- 499
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
L++I L+D Y + G+ + +F + +D+V+WT+M+ N
Sbjct: 500 -------------LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNN 546
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G AV LF M + +P++ L ++L + L+SL GKQ+H +R V
Sbjct: 547 GRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVV 606
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
++L+ MYS G++N A RVF + + V WT+MI A HG G++AI LF+RML+ G+
Sbjct: 607 SSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMHGHGKQAIDLFKRMLQTGL 665
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
PDH++++ +L AC+H LVE+G+ Y ++M + +++KP H+A +VD+LGR+G +EAY
Sbjct: 666 TPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAY 725
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
FI+ MP++P W +LL ACRVH+N L +AA KLL +EPDN G Y + N+++ G
Sbjct: 726 EFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMG 785
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI- 689
KW +A R M G++K SW++I N +H F D+ H +AI+ K+++I + +
Sbjct: 786 KWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLR 845
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+E G+V DT VLHD E+ K ML HSE++AIAFGLIST +RI KNLRVC DCH
Sbjct: 846 REGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCH 905
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + KL +R+IVVRDA RFHHF G CSC D+W
Sbjct: 906 EFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 230/514 (44%), Gaps = 85/514 (16%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV---LPTQ 145
Y + GR+D A +FN MP R SW ++ Y G A+R++ M P
Sbjct: 105 YGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDG 164
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
T+ SVL +C A GD G +VH VK GL V N+L+ MYAK G A VF+
Sbjct: 165 CTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEW 224
Query: 206 MR--LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
++ ++V+SWN VVS G QNG EAL
Sbjct: 225 LQQDARDVASWNSVVS-------------------------------GCVQNGRTLEALA 253
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M + + + +T + L CA L L LG+++HA AL+ C
Sbjct: 254 LFRGM-QSAGFPMNSYTSVAVLQVCAELGLLSLGRELHA---------------ALLKCG 297
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+++ I LL Y K G + A R+F + ++D ++W +M
Sbjct: 298 SELN-------------------IQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSM 338
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
L Y QN +A++ F M++ G +P++ + ++ S L+ L++G++ HA A++
Sbjct: 339 LSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRL 398
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ L V N L+ MY K G+I + +VF + R + +SWT+++ AQ EA+++
Sbjct: 399 HTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR-DHISWTTILACFAQSSRHSEALEMIL 457
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-----SMVD 558
+ + GI D + +L C G + +++K VH ++D
Sbjct: 458 ELQKEGIMVDSMMIGSILETCC-------GLKSISLLKQVHCYAIRNGLLDLILENRLID 510
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
+ G G + N + + + D+V+W S+++ C
Sbjct: 511 IYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCC 543
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 244/570 (42%), Gaps = 111/570 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD--EMPVKTLCSWNTILSAY 89
G VH +K GL S + N+L+ YAK + A +VF+ + + + SWN+++S
Sbjct: 183 GGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-TQFTV 148
+ GR A +F M Q P +T
Sbjct: 243 VQNGRTLEALALFRGM--------------------------------QSAGFPMNSYTS 270
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV-TNSLLNMYAKVGDEMMAKAVFDGMR 207
+VL C LG LS G+++H+ ++K G +N+ N+LL MYAK G A VF +
Sbjct: 271 VAVLQVCAELGLLSLGRELHAALLKCGSE--LNIQCNALLVMYAKYGRVDSALRVFGQIA 328
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K+ SW NSM++ Y QN + EA+ F
Sbjct: 329 EKDYISW-------------------------------NSMLSCYVQNSFYAEAIDFFGE 357
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML+ +PD + S SA +L +L G++ HAY I+ VGN L+ Y K G
Sbjct: 358 MLQH-GFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCG 416
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E + K+ E GI RD ++WT +L +
Sbjct: 417 SIECSAKVFESMGI---------------------------------RDHISWTTILACF 443
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q+ + +A+E+ + +EG ++ + ++L L S+ KQ+H A+R+G L
Sbjct: 444 AQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNG-LLDL 502
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ N LI +Y + G + + +F + +++ VSWTSMI +G A+ LF M +
Sbjct: 503 ILENRLIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLNGAVFLFTEMQK 561
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM--KNVHKIKPTPSHFASMVDLLGRAGL 565
I+PD + V +L A + +G++ + + +N P S S+VD+ G
Sbjct: 562 ANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVS---SLVDMYSGCGS 618
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ A E + DVV W ++++A +H
Sbjct: 619 MNYAIRVFERAKCK-DVVLWTAMINATGMH 647
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 190/381 (49%), Gaps = 47/381 (12%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS--L 274
+V ++ GR+D AR F+ M R V +WN+++ Y +G EA+ ++ M ++
Sbjct: 101 LVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGS 160
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
PD TLAS L AC + G ++H ++ D + V NALI YAK G
Sbjct: 161 APDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCG------- 213
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD--RDVVAWTAMLVGYEQNGL 392
LLD A R+F+ L+ RDV +W +++ G QNG
Sbjct: 214 -----------------LLD---------SALRVFEWLQQDARDVASWNSVVSGCVQNGR 247
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-N 451
+A+ LFR M G N+YT A+L V + L L G+++HA+ L+ G S L++ N
Sbjct: 248 TLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG--SELNIQCN 305
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ MY+K G +++A RVF I ++ +SW SM+ Q+ EAI F ML+ G +
Sbjct: 306 ALLVMYAKYGRVDSALRVFGQIA-EKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQ 364
Query: 512 PDHITYVGVLTACTHGGLVEQGQRY--YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
PDH V + +A H + G+ + Y + + +H + +++D+ + G ++ +
Sbjct: 365 PDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGN---TLMDMYIKCGSIECS 421
Query: 570 YNFIENMPLEPDVVAWGSLLS 590
E+M + D ++W ++L+
Sbjct: 422 AKVFESMGIR-DHISWTTILA 441
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 10/254 (3%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF---RSMVRE 406
T L+ Y + G + ARR+F+ + R V +W A++ Y +G +A+ ++ R+
Sbjct: 99 TKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAP 158
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G P+ TL+++L + G ++H A++ G S V+NALI MY+K G +++A
Sbjct: 159 GSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSA 218
Query: 467 RRVFNLIHW-RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
RVF + ++ SW S++ Q+G EA+ LF M G + T V VL C
Sbjct: 219 LRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCA 278
Query: 526 HGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
GL+ G+ + ++K ++ + M GR + I E D ++
Sbjct: 279 ELGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYGRVDSALRVFGQIA----EKDYIS 334
Query: 585 WGSLLSACRVHKNL 598
W S+LS C V +
Sbjct: 335 WNSMLS-CYVQNSF 347
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG---EASSLSVSN 451
D + R + P P +L + ++ + G+Q+HA A+ +G E ++
Sbjct: 41 DLRQALRQLTTRAP-PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLAT 99
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM---LEL 508
L+ MY + G ++ ARR+FN + R SW +++ A G EA++++ M
Sbjct: 100 KLVFMYGRCGRVDDARRLFNGMPART-VFSWNALVGAYLSSGSAGEAMRVYGAMRASAAP 158
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G PD T VL AC G G + + V K T A ++ + + GLL
Sbjct: 159 GSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANA-LIGMYAKCGLLDS 217
Query: 569 AYNFIENMPLEP-DVVAWGSLLSAC 592
A E + + DV +W S++S C
Sbjct: 218 ALRVFEWLQQDARDVASWNSVVSGC 242
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/691 (35%), Positives = 384/691 (55%), Gaps = 66/691 (9%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+D A +FN + +S ++ +I NA+ +F +M + V +FT +SVL +
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C+ + L G++VH+ ++K+G V N+L+ MYA
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYA----------------------- 167
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+ G++ +AR FD M ER +V WNSM++GY++NG E + +F +L + +
Sbjct: 168 --------NCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKIL-ELRI 218
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+ D T+ S L AC L L++G+ I YI+
Sbjct: 219 EFDDVTMISVLMACGRLANLEIGELIGEYIV----------------------------- 249
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
G+ N + T+L+D Y K G + AR++FD + RDVVAW+AM+ GY Q K
Sbjct: 250 ---SKGLRRNNTLT-TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCK 305
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A+ LF M + PN T+ ++L + L + + GK +H + ++++ LI
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLI 365
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
Y+K G I+ + VF + ++ +WT++I LA +G G+ A++ F MLE +KP+
Sbjct: 366 DFYAKCGYIDRSVEVFKEMSFKN-VFTWTALIQGLANNGEGKMALEFFSSMLENDVKPND 424
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+T++GVL+AC+H LV+QG+ +N M+ I+P H+ MVD+LGRAG L+EAY FI+
Sbjct: 425 VTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFID 484
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
NMP P+ V W +LL++CR HKN+++ + + E + +EP +SG Y L N Y+ G+ ED
Sbjct: 485 NMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVED 544
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A +R +K +KK G S +++ VH F ED H I++ + K+ +IK +G+
Sbjct: 545 AIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGY 604
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VP+T + EE+ KE + HHSEKLAIA+GLI T TT+RI KNLR+C DCH+A KF
Sbjct: 605 VPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKF 664
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I ++ +R I+VRD RFHHFK GLCSC DYW
Sbjct: 665 ISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 235/534 (44%), Gaps = 107/534 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA I+K G + F++N+L+ YA I A+ VFD MP +++ +WN++LS Y K
Sbjct: 140 GEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTK 199
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G D +++F ++++ ++ T+ SV
Sbjct: 200 NGLWD-------------------------------EVVKLFRKILELRIEFDDVTMISV 228
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L +L G+ + ++V GL +T SL++MYAK G A+ +FD M ++V
Sbjct: 229 LMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDV 288
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+W ++MI+GY+Q EAL +F M K
Sbjct: 289 VAW-------------------------------SAMISGYAQADRCKEALNLFHEMQK- 316
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ P++ T+ S L +CA L + GK +H YI + + T +G LI YAK G ++
Sbjct: 317 GNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDR 376
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+ ++ ++ +S+ NV +T L+ G NG
Sbjct: 377 SVEVFKE--MSFKNVFTWTALIQ-------------------------------GLANNG 403
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVS 450
K A+E F SM+ KPN+ T +LS S +D G+ + S R + +
Sbjct: 404 EGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHY 463
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE--L 508
++ + +AG + A + + + + V W +++ + H + I++ E+ LE
Sbjct: 464 GCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAH----KNIEMAEKSLEHIT 519
Query: 509 GIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
++P H Y+ + G VE R +++K +IK P S+++L G
Sbjct: 520 RLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKE-KEIKKIPG--CSLIELDG 570
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 41/249 (16%)
Query: 432 KQIHASALRSGEASSLSVSNALITMYSK--AGNINAARRVFNLIHWRQETVSWTSMIVAL 489
+Q+HA L++ ++ A++ + I+ A +FN I + E+ ++ MI L
Sbjct: 38 QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHID-KPESSAYNVMIRGL 96
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
A + A+ LF++M E ++ D T+ VL AC+ + +G++ + ++ K
Sbjct: 97 AFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILK-SGFKSN 155
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS------------------- 590
+++ + G + A + + MP E +VAW S+LS
Sbjct: 156 EFVENTLIQMYANCGQIGVARHVFDGMP-ERSIVAWNSMLSGYTKNGLWDEVVKLFRKIL 214
Query: 591 ----------------ACRVHKNLDLGKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWE 633
AC NL++G++ E ++ N+ ++L ++Y+ CG+ +
Sbjct: 215 ELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVD 274
Query: 634 DAANIRKSM 642
A + M
Sbjct: 275 TARKLFDEM 283
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/728 (34%), Positives = 397/728 (54%), Gaps = 88/728 (12%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQV 141
N ++ YAK G L +A EVF MP R+ VSWT ++V + G + +R+ M V
Sbjct: 43 NNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDV 102
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT+++ L +C +GD++AG +H V+ G G V NSL+ +Y+K
Sbjct: 103 APNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSK--------- 153
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
GR+ AR FD + R++VTWN+MI+GY+ G+ ++
Sbjct: 154 ----------------------GGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDS 191
Query: 262 LGMFANMLK----DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
L +F M + + +PD+FT AS L AC +L + G Q+HA ++
Sbjct: 192 LLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMV------------ 239
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP-ARRIFDSLRDRD 376
+ GV A N I LLD Y+K + P A ++F+ L ++
Sbjct: 240 --------IRGVSTAS-----------NAILAGALLDMYVKCRCLLPMAMQVFNRLEQKN 280
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+ WT ++VG+ Q G K+A+ELF G + + + LS+++ V + A ++ G+Q+H
Sbjct: 281 AIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHC 340
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+++ +SV+N+LI MY K G + A R F + R VSWT+MI L +HG G+
Sbjct: 341 YTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARN-VVSWTAMINGLGKHGHGQ 399
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EAI +FE M G++PD + Y+ +L+AC+H GLVE+ +RY++ +++ +++P H+A M
Sbjct: 400 EAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACM 459
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLLGRAG L EA + + MP+ P V W +LLSACRVHKN+ +G+ A E LL I+ DN
Sbjct: 460 VDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNP 519
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQR 675
Y L N+++ G W + +R +M+ G++K G SWV++ + H F G D HP+
Sbjct: 520 VNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRA 579
Query: 676 DAIYNKMAKIWDEIKE-MGFVPDTA-----SVLHDVEEDVKEQMLRHHSEKLAIAF---- 725
I + + ++E +G+ P ++ + LHDV+E+ + + LR HSE+LA+
Sbjct: 580 ADICCVLRDVERTMRERLGYSPGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLL 639
Query: 726 --------GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
G+ T +R+ KNLRVC DCH K + +V R +VVRDA RFH F+ G
Sbjct: 640 HHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDG 699
Query: 778 LCSCRDYW 785
+CSC+DYW
Sbjct: 700 VCSCKDYW 707
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 206/494 (41%), Gaps = 104/494 (21%)
Query: 8 SLISPLEFYAHLLQSNLKS----RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
S ++P EF L ++LK+ + G +H ++ G + NSL+ Y+K
Sbjct: 100 SDVAPNEF---TLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGR 156
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A++VFD + L +WN ++S YA G RDS ++ + E+
Sbjct: 157 IGDARRVFDGTVFRNLVTWNAMISGYAHAGH------------GRDS------LLVFREM 198
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-- 181
+ + ++ P +FT S+L +C +LG G +VH+ +V G+S N
Sbjct: 199 QQRRQE--------EEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAI 250
Query: 182 VTNSLLNMYAKVGDEM-MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+ +LL+MY K + MA VF+ + KN W V
Sbjct: 251 LAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTV----------------------- 287
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
I G++Q G EA+ +F S ++ D L+S + A+ ++ G+Q+
Sbjct: 288 --------IVGHAQEGQVKEAMELFGRFWS-SGVRADGHVLSSVVGVFADFALVEQGRQV 338
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H Y ++T P G L+V +L+D Y K G
Sbjct: 339 HCYTVKT------PAG---------------------------LDVSVANSLIDMYHKCG 365
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
A R F + R+VV+WTAM+ G ++G ++A+ +F M EG +P+ A+LS
Sbjct: 366 LTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLS 425
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQE 478
S ++ ++ + SA+R + ++ + +AG ++ A+ + +
Sbjct: 426 ACSHSGLVEECRR-YFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPT 484
Query: 479 TVSWTSMIVALAQH 492
W +++ A H
Sbjct: 485 VGVWQTLLSACRVH 498
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 38/265 (14%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
+A L A A + G Q+H +++ F + +GN LI YAK G + +A ++ G
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVF--GG 64
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+ NV+++T L+ G+++ GD R+ ++R VA
Sbjct: 65 MPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVA--------------------- 103
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
PN +TLSA L + + G IH + +R+G V+N+L+ +YSK
Sbjct: 104 ---------PNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKG 154
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-----ELGIKPDHI 515
G I ARRVF+ +R V+W +MI A G G +++ +F M E +PD
Sbjct: 155 GRIGDARRVFDGTVFRN-LVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEF 213
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMM 540
T+ +L AC G +G + + M
Sbjct: 214 TFASLLKACGSLGAAREGAQVHAAM 238
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 26/189 (13%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
++ ML S++ +++ G Q+H + L+ G S + N LI MY+K G + A VF +
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTAC--------- 524
R VSWT+++V +HG E ++L M L + P+ T L AC
Sbjct: 67 ERN-VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125
Query: 525 --THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
HG V G ++++ N S+V L + G + +A + ++
Sbjct: 126 VWIHGACVRAGFEGHHVVAN------------SLVLLYSKGGRIGDARRVFDGTVFR-NL 172
Query: 583 VAWGSLLSA 591
V W +++S
Sbjct: 173 VTWNAMISG 181
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/707 (36%), Positives = 395/707 (55%), Gaps = 42/707 (5%)
Query: 85 ILSAYA--KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QV 141
+L+AYA L A VFN +P + W T+I Y + +F+ M+
Sbjct: 110 LLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSE 169
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT + + + L L G +H V+K LS + + NSL+N Y
Sbjct: 170 FPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGS--------- 220
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
SG DLA F M +DVV+WN+MI ++ G +A
Sbjct: 221 ----------------------SGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKA 258
Query: 262 LGMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
L +F M +KD +KP+ T+ S LSACA L+ G+ I +YI F + NA++
Sbjct: 259 LLLFQEMEMKD--VKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAML 316
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
Y K G + A+ + + +S +++++TT+LDG+ K+G+ A IFD++ + AW
Sbjct: 317 DMYVKCGCINDAKDLFNK--MSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAW 374
Query: 381 TAMLVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
A++ YEQNG + A+ LF M + + KP+ TL L S+ L ++D G IH
Sbjct: 375 NALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIK 434
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+ + ++ +L+ MY+K GN+N A VF+ + R++ W++MI ALA +G G+ A+
Sbjct: 435 KHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVE-RKDVYVWSAMIGALAMYGQGKAAL 493
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF MLE IKP+ +T+ +L AC H GLV +G++ + M+ ++ I P H+ +VD+
Sbjct: 494 DLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDI 553
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
GRAGLL++A +FIE MP+ P WG+LL AC H N++L ++A + LL +EP N GA+
Sbjct: 554 FGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAF 613
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+ G WE +N+RK M+ VKK S + + VH F V D HP IY
Sbjct: 614 VLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIY 673
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEED-VKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+K+ +I ++ K +G+ PD +++L EED + EQ L HSEKLAIAFGLIST + +RI
Sbjct: 674 SKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRI 733
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KN+R+C DCH+ K + +L DR+I++RD RFHHF+ G CSC DYW
Sbjct: 734 VKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 209/501 (41%), Gaps = 78/501 (15%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G ++H +IK L +F+ NSL+NFY +
Sbjct: 191 LGSVLHGMVIKASLSSDLFILNSLINFYGSS----------------------------- 221
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G DLA VF MP +D VSW +I + G A+ +F EM V P T+ S
Sbjct: 222 --GAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVS 279
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C DL G+ + S++ G + + + N++L+MY K G AK +F+ M K+
Sbjct: 280 VLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKD 339
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ SW ++ H G D A FD M + WN++I+ Y QNG AL +F M
Sbjct: 340 IVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQL 399
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
KPD+ TL L A A L + G IH YI + + + + +L+ YAK
Sbjct: 400 SKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKC---- 455
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
G++ A +F ++ +DV W+AM+
Sbjct: 456 -----------------------------GNLNKAMEVFHAVERKDVYVWSAMIGALAMY 486
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEASSLSV 449
G K A++LF SM+ KPN T + +L + ++ G+Q+ G +
Sbjct: 487 GQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQH 546
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
++ ++ +AG + A + W +++ A ++HG E A ++ +LE
Sbjct: 547 YVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLE-- 604
Query: 510 IKPDHITYVGVLTACTHGGLV 530
L C HG V
Sbjct: 605 -----------LEPCNHGAFV 614
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 167/355 (47%), Gaps = 15/355 (4%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ + + I G + L N++++ Y K I+ AK +F++M K + SW T+L +AK
Sbjct: 293 GRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAK 352
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTS 150
G D A +F+ MP++ + +W +I Y + G+ + A+ +F EM + P + T+
Sbjct: 353 LGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLIC 412
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L + LG + G +H ++ K ++ ++ SLL+MYAK G+ A VF + K+
Sbjct: 413 ALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKD 472
Query: 211 VSSWNVVVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
V W+ ++ G+ LDL + + I+ + VT+ +++ + G E +F
Sbjct: 473 VYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFE 532
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M + P + + + L ++ ++I + T V AL+ ++
Sbjct: 533 QMEPLYGIVPQ---IQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRH 589
Query: 327 GGVEIA----QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
G VE+A Q ++E + N AF L + Y K GD + +RD DV
Sbjct: 590 GNVELAELAYQNLLE---LEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDV 641
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/739 (34%), Positives = 410/739 (55%), Gaps = 73/739 (9%)
Query: 59 AKTESISYAKKVFDEMPVKTLCS------------WNTILSAYAKQGRLDLACEVFNLMP 106
A T+++++ K + ++ ++ S N++++ Y K +L LA +F+ M
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
R VS+ ++ Y G +++F MV P ++ T+VL++C G + G +
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
H F+ K GL V +SL++MY+K ++V ++L +
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSK--------------------CFHVDLALQV---- 178
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
L+ D + D +NS++ ++G EA+ + M+ D + D T S +
Sbjct: 179 LESEHGNIDN--DNDAFCYNSVLNALVESGRLGEAVEVLGRMV-DEGVVWDSVTYVSVMG 235
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
C + L LG Q+HA +++ GG+ +V
Sbjct: 236 LCGQIRDLGLGLQVHAQLLK--------------------GGLT-------------FDV 262
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+ L+D + K GD+ AR++FD L++R+VV WT+++ Y QNG ++ + L M RE
Sbjct: 263 FVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDRE 322
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G N +T + +L+ + +A+L HG +HA + G + + V NALI MYSK G I+++
Sbjct: 323 GTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSS 382
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
VF + R + ++W +MI +QHGLG++A+ LF+ ML G P+H+T+VGVL+AC H
Sbjct: 383 YDVFFDMRNR-DIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAH 441
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
LV +G Y N + K++P H+ +V +L RAG+L+EA NF+ ++ DVVAW
Sbjct: 442 LALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWR 501
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
LL+AC +H+N +LG AE +L ++P + G Y+ L N+Y+ W+ IRK M+
Sbjct: 502 VLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERN 561
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
VKK G SW++I+N VHVF + HP+ IYNK+ + + IK++G+VP+ +VLHDVE
Sbjct: 562 VKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVE 621
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
++ KE L +HSEKLAIA+GL+ P +R++KNLR+C DCH+A+K I K+ +R I+VR
Sbjct: 622 DEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVR 681
Query: 767 DATRFHHFKKGLCSCRDYW 785
DA+RFHHF+ G C+C D+W
Sbjct: 682 DASRFHHFRDGTCTCTDHW 700
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 169/384 (44%), Gaps = 69/384 (17%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ +G VHA+++K GL VF+ + L++ + K + A+KVFD + + + W +++
Sbjct: 241 RDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLM 300
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+AY + G + E NL+ D ++ + +F
Sbjct: 301 TAYLQNGEFE---ETLNLLSCMD----------------------------REGTMSNEF 329
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +L + + L G +H+ V K G+ V V N+L+NMY+K G + VF M
Sbjct: 330 TFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDM 389
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
R +++ +TWN+MI GYSQ+G +AL +F
Sbjct: 390 RNRDI-------------------------------ITWNAMICGYSQHGLGKQALLLFQ 418
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLG-KQIHAYIIRTEFDATGPVGNALISCYAK 325
+ML P+ T LSACA+L + G ++ + + + +++ +
Sbjct: 419 DMLSAGEC-PNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCR 477
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD---RDVVAWTA 382
G +E A+ + + + + +V+A+ LL+ + +I +++ RD+ +T
Sbjct: 478 AGMLEEAENFMRTTQVKW-DVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTL 536
Query: 383 MLVGYEQNGLNKDAVELFRSMVRE 406
+ Y + + D+V + R M+RE
Sbjct: 537 LSNMYAK-ARSWDSVTMIRKMMRE 559
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 262/799 (32%), Positives = 410/799 (51%), Gaps = 110/799 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P P + + + A LL+++ K + G +H + K G L N+L++ YAK
Sbjct: 208 PFPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKC-- 265
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
G LD+A EVF M +R+ VSWT ++V + +
Sbjct: 266 -----------------------------GELDMAGEVFGGMRDRNVVSWTALMVGFLQH 296
Query: 124 GRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G +R+ EM + P ++T+++ L +C D+ AG +H V+TG V
Sbjct: 297 GDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVV 356
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+SL+ +Y+K G A+ VFD L R +
Sbjct: 357 ASSLVLLYSKGGRIGDARRVFDCAGLG------------------------------RGL 386
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLK-----DSSLKPDKFTLASTLSACANLEKLKLG 297
TWN+MI+GY+ G+ +AL +F M + + +PD+FT AS L AC L + G
Sbjct: 387 ATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREG 446
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
Q+HA + + F N I L+D Y+
Sbjct: 447 AQVHAAMAASGFSTAS-------------------------------NAILAGALVDMYV 475
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
K G + A ++F+ L ++ + WT ++VG+ Q G +A+ELFR R G + + + LS+
Sbjct: 476 KCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSS 535
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
++ V + A ++ G+Q+H ++S + +S N+++ MY K G + A R+F I R
Sbjct: 536 IVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARN 595
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
VSWT+MI L +HGLG EA+ +FE M G++PD +TY+ +L+AC+H GLV++ +RY+
Sbjct: 596 -VVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYF 654
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+ ++ ++P H+A MVDLLGRAG L+EA + I MP+EP V W +LLSACRVHK+
Sbjct: 655 SCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 714
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
+ +G+ A + LL I+ DN Y L N+++ G W + +R +M+ G+KK G SWV+
Sbjct: 715 VAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVE 774
Query: 658 IQNKVHVF--GVEDWLHPQRDAIYNKMAKIWDEIKE-MGFVPDTAS-VLHDVEEDVKEQM 713
I +VH F G ++ HPQ I + + ++E +G+ D LHDV+E+ + +
Sbjct: 775 IGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDVQFALHDVDEESRAES 834
Query: 714 LRHHSEKLAIAFGLIST-------PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
LR HSE+LA+ L+ +R+ KNLRVC DCH K + +V R +VVR
Sbjct: 835 LRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVR 894
Query: 767 DATRFHHFKKGLCSCRDYW 785
DA RFH F+ G CSC+DYW
Sbjct: 895 DANRFHRFEHGTCSCKDYW 913
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/639 (39%), Positives = 384/639 (60%), Gaps = 48/639 (7%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK-VGDEMMAKAVFDGMR 207
T +A+ GDL+ ++ + + + N LL YA+ +G A+ +FD +
Sbjct: 21 TVAVAAAVRRGDLTGAEEAFASTPRKTTA----TYNCLLAGYARALGRLADARHLFDRIP 76
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ S+N ++S H SG D AR F M RDVV+WN+M++G S++G EA +F
Sbjct: 77 TPDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLA 136
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +S+ NA++S +A
Sbjct: 137 MPVRNSVS----------------------------------------WNAMVSGFACSR 156
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A++ ++ + + +T ++ GY+ IG++ A F+++ R++V+W A++ GY
Sbjct: 157 DMSAAEEWF-RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGY 215
Query: 388 EQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+N DA+ LFR+MVRE +PN TLS++L S+L++L GKQIH ++ + +
Sbjct: 216 VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRN 275
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L+V +L++MY K G++++A ++F +H R + V+W +MI AQHG G+EAI LFERM
Sbjct: 276 LTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVVAWNAMISGYAQHGDGKEAINLFERMK 334
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G++P+ IT+V VLTAC H GL + G R + M+ ++ I+P H++ MVDLL RAG L
Sbjct: 335 DEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 394
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+ A + I +MP EP A+G+LL+ACRV+KNL+ ++AA KL+ +P ++GAY L N+Y
Sbjct: 395 ERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIY 454
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ +W+D + +R+ MK V KT G+SW++I+ +H F D LHPQ I+ K+ ++
Sbjct: 455 AGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLA 514
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+ +K MG+VPD VLHDV+E +K QML HSEKLAI+FGLIST TLRI KNLRVC
Sbjct: 515 ERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCG 574
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A K I K+ DREI++RD TRFHHF+ G CSC DYW
Sbjct: 575 DCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 171/359 (47%), Gaps = 49/359 (13%)
Query: 52 NSLMNFYAKT-ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N L+ YA+ ++ A+ +FD +P S+NT+LS + G D A +F MP RD
Sbjct: 52 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV 111
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT--SVLASCTALGDLSAGKKVH 168
VSW T++ ++ G + A +F+ M P + +V+ ++++ D+SA ++
Sbjct: 112 VSWNTMVSGLSKSGAVEEAKAVFLAM------PVRNSVSWNAMVSGFACSRDMSAAEE-- 163
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+ G + ++++ Y +G+ + A F+ M ++N+ SWN VV
Sbjct: 164 -WFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVV---------- 212
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AGY +N + +AL +F M+++++++P+ TL+S L C
Sbjct: 213 ---------------------AGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
+NL L GKQIH + ++ VG +L+S Y K G + A K+ + + +V+A
Sbjct: 252 SNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGE--MHTRDVVA 309
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDV----VAWTAMLVGYEQNGLNKDAVELFRSM 403
+ ++ GY + GD A +F+ ++D V + + A+L GL + F M
Sbjct: 310 WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGM 368
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 38/156 (24%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L L SNL + GK +H +K L ++ + SL++ Y K
Sbjct: 239 PNASTLSSVL-----LGCSNLSALG--FGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGD 291
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+S A K+F EM + + +WN ++S YA+
Sbjct: 292 LSSACKLFGEMHTRDVVAWNAMISGYAQH------------------------------- 320
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
G K AI +F M + V P T +VL +C G
Sbjct: 321 GDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 257/754 (34%), Positives = 396/754 (52%), Gaps = 98/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +VH ++K G + N+L++FYAK+ I A VFDEMP + + SWN+I+ A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G D A E+F +RM++E Q L + T+ SV
Sbjct: 63 NGLYDKAVELF---------------------------VRMWLE---GQELDST-TLLSV 91
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C G VH + V+TGL ++ N+LL+MY+ D +F M KNV
Sbjct: 92 MPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNV 151
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW +++ + +G D +AG F+ +G+
Sbjct: 152 VSWTAMITSYTRAGHFD-------------------KVAGL------FQEMGL------- 179
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++PD F + S L A A E LK GK +H Y IR + PV NAL+ Y K G +E
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEE 239
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+ I FD + +D ++W ++ GY ++
Sbjct: 240 ARFI---------------------------------FDHVTKKDTISWNTLIGGYSRSN 266
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L +A LF M+ + +PN T++ +L ++SL+SL+ G+++HA A+R G V+N
Sbjct: 267 LANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVAN 325
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ MY K G + ARR+F+++ + +SWT MI HG G +AI LFE+M GI+
Sbjct: 326 ALVDMYVKCGALLLARRLFDMLT-NKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQ 384
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD ++ +L AC+H GL ++G R++N M+N H+I+P H+A MVDLL G L+EAY
Sbjct: 385 PDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYE 444
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FIE MP+EPD W SLL CR+H+N+ L + AE + +EP+N+G Y L N+Y+ +
Sbjct: 445 FIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAER 504
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
WE ++ + G+++ G SW++++ K H+F E+ HPQ I + + ++E
Sbjct: 505 WEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQE 564
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G P L ++ V ++ L HS KLA+AFG+++ + +R+ KN RVC+ CH A
Sbjct: 565 EGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEA 624
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KFI K+ REI++RD+ RFHHF++G CSCR YW
Sbjct: 625 AKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 209/506 (41%), Gaps = 102/506 (20%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
++ + ++S F+G +VH ++ GL L N+L++ Y+ K+F M K
Sbjct: 91 VMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKN 150
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ SW ++++Y + G D +F EM
Sbjct: 151 VVSWTAMITSYTRAGHFD-------------------------------KVAGLFQEMGL 179
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ + P F +TS L + L GK VH + ++ G+ + V N+L+ MY K G
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEE 239
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ +FD + K+ SW N++I GYS++
Sbjct: 240 ARFIFDHVTKKDTISW-------------------------------NTLIGGYSRSNLA 268
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
EA +F ML L+P+ T+A L A A+L L+ G+++HAY +R + V NA
Sbjct: 269 NEAFTLFNEMLL--QLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANA 326
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+ Y K G + +A++ +FD L +++++
Sbjct: 327 LVDMYVKCGALLLARR---------------------------------LFDMLTNKNLI 353
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+WT M+ GY +G +DA+ LF M G +P+ + SA+L S D G + +A
Sbjct: 354 SWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFF-NA 412
Query: 439 LRSGE--ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+R+ L ++ + GN+ A + ++ W S++ H +
Sbjct: 413 MRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVK 472
Query: 497 EAIQLFERMLELGIKPDHITYVGVLT 522
A ++ E + EL +P++ Y +L
Sbjct: 473 LAEKVAEMVFEL--EPENTGYYVLLA 496
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/641 (38%), Positives = 357/641 (55%), Gaps = 67/641 (10%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ S+L SC + L GK++H+ + + G++ +++ L+N Y+
Sbjct: 58 HYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNS--------- 108
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
L+N A FD++ + ++ WN +I Y+ NG A+ +
Sbjct: 109 ---LRN-------------------AHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISL 146
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
+ ML + LKPD FTL L AC+ L + G+ IH +IR+ ++ VG AL+
Sbjct: 147 YHQML-EYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALV---- 201
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
D Y K G + AR +FD + DRD V W +ML
Sbjct: 202 -----------------------------DMYAKCGCVVDARHVFDKIVDRDAVLWNSML 232
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y QNG +++ L M +G +P TL ++S S+ +A L HG++IH R G
Sbjct: 233 AAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQ 292
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ V ALI MY+K G++ A +F + + VSW ++I A HGL EA+ LFER
Sbjct: 293 YNDKVKTALIDMYAKCGSVKVACVLFERLR-EKRVVSWNAIITGYAMHGLAVEALDLFER 351
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M++ +PDHIT+VG L AC+ G L+++G+ YN+M +I PT H+ MVDLLG G
Sbjct: 352 MMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCG 410
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L EAY+ I M + PD WG+LL++C+ H N++L ++A EKL+ +EPD+SG Y L N
Sbjct: 411 QLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILAN 470
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y+ GKWE A +R+ M G+KK SW++++NKV+ F D HP AIY ++ +
Sbjct: 471 MYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKR 530
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++E G+VPDT SV HDVEED K M+ HSE+LAIAFGLIST T L I KNLR+
Sbjct: 531 LEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRI 590
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH AIKFI K+ +REI VRD R+HHF+ GLCSC DYW
Sbjct: 591 CEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 234/508 (46%), Gaps = 100/508 (19%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
PS S +YA LL+S + ++ GK +HAR+ + G+ ++ L L+NFY+ S+
Sbjct: 52 PSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRN 111
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
A +FD++P L WN ++ AYA W G
Sbjct: 112 AHHLFDKIPKGNLFLWNVLIRAYA----------------------WN---------GPH 140
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+ AI ++ +M++ + P FT+ VL +C+AL + G+ +H V+++G V V +L
Sbjct: 141 ETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAAL 200
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK G + A+ VFD ++++RD V WN
Sbjct: 201 VDMYAKCGCVVDARHVFD-------------------------------KIVDRDAVLWN 229
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
SM+A Y+QNG+ E+L + M ++P + TL + +S+ A++ L G++IH + R
Sbjct: 230 SMLAAYAQNGHPDESLSLCCEMAA-KGVRPTEATLVTVISSSADIACLPHGREIHGFGWR 288
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
F V ALI YAK G V++A
Sbjct: 289 HGFQYNDKVKTALIDMYAKCGSVKVACV-------------------------------- 316
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+F+ LR++ VV+W A++ GY +GL +A++LF M++E +P++ T L+ S
Sbjct: 317 -LFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGR 374
Query: 427 SLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
LD G+ ++ +R + ++ ++ + G ++ A + + ++ W ++
Sbjct: 375 LLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGAL 434
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPD 513
+ + HG E A E+++EL +PD
Sbjct: 435 LNSCKTHGNVELAEVALEKLIEL--EPD 460
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 173/421 (41%), Gaps = 86/421 (20%)
Query: 11 SPLEFYAHLLQSNLKSRN---PFV------------GKLVHARIIKCGLHLSVFLKNSLM 55
+ + Y +L+ LK N PFV G+++H R+I+ G VF+ +L+
Sbjct: 142 TAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALV 201
Query: 56 NFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTT 115
+ YAK + A+ VFD++ +RD+V W +
Sbjct: 202 DMYAKCGCVVDARHVFDKIV-------------------------------DRDAVLWNS 230
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
++ Y + G ++ + EM V PT+ T+ +V++S + L G+++H F + G
Sbjct: 231 MLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHG 290
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
V +L++MYAK G +A +F+ +R K V SWN +
Sbjct: 291 FQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAI------------------ 332
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
I GY+ +G EAL +F M+K++ +PD T L+AC+ L
Sbjct: 333 -------------ITGYAMHGLAVEALDLFERMMKEA--QPDHITFVGALAACSRGRLLD 377
Query: 296 LGKQIHAYIIR-TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI----SYLNVIAFT 350
G+ ++ ++R + T ++ G ++ A ++ Q + + +
Sbjct: 378 EGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNS 437
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
G +++ ++ + I L D + + Y Q+G + L + M+ +G K
Sbjct: 438 CKTHGNVELAEVALEKLI--ELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKK 495
Query: 411 N 411
N
Sbjct: 496 N 496
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
N+Y +++L S +L+ GKQ+HA + G A +L ++ L+ YS ++ A +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
+ I + W +I A A +G E AI L+ +MLE G+KPD+ T VL AC+ +
Sbjct: 117 DKIP-KGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTI 175
Query: 531 EQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+G+ + + V + F A++VD+ + G + +A + + + ++ D V W S+
Sbjct: 176 GEGRVIH---ERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSM 231
Query: 589 LSA 591
L+A
Sbjct: 232 LAA 234
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/749 (35%), Positives = 405/749 (54%), Gaps = 76/749 (10%)
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+R + I+ + ++G +NA+ + V M Q L T+ T +SVL C L+ GKK
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMEL-VCMCQKSELETK-TYSSVLQLCAGSKSLTDGKK 120
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH----- 221
VHS + ++ + L+++YA GD + VFD M KNV WN +VS +
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 222 ---------------IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
I R + A FD++ +RDV++WNSMI+GY NG L ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M+ + D T+ S L CAN L LGK +H+ I++ F+ N L+ Y+K
Sbjct: 241 QMMY-LGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC 299
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTA 382
G ++ A ++ E+ G NV+++T+++ GY + G A R+ + DVVA T+
Sbjct: 300 GDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTS 357
Query: 383 MLVG-----------------------------------YEQNGLNKDAVELFRSMVREG 407
+L Y + G A +F +MV +
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417
Query: 408 P----------KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
KP++ T++ +L +SL++L+ GK+IH LR+G +S V+NAL+ +Y
Sbjct: 418 IISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
K G + AR +F++I ++ VSWT MI HG G EAI F M + GI+PD +++
Sbjct: 478 VKCGVLGLARLLFDMIP-SKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
+ +L AC+H GL+EQG R++ +MKN I+P H+A MVDLL R G L +AY FIE +P
Sbjct: 537 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLP 596
Query: 578 LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
+ PD WG+LL CR++ +++L + AE++ +EP+N+G Y L N+Y+ KWE+
Sbjct: 597 IAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKR 656
Query: 638 IRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
+R+ + G++K G SW++I+ KV++F + HP I + + K+ ++KE G+ P
Sbjct: 657 MREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFP 716
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
T L + +E KE L HSEKLA+AFGL++ P T+R+ KNLRVC DCH KF+
Sbjct: 717 KTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMS 776
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K REIV+RD+ RFHHFK G CSCR +W
Sbjct: 777 KETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 174/677 (25%), Positives = 282/677 (41%), Gaps = 112/677 (16%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ +LQ S++ GK VH+ I + + L L++ YA + ++VFD M
Sbjct: 102 YSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTME 161
Query: 76 VKTLCSWNTILSAYAKQG--------------------RLDLACEVFNLMPNRDSVSWTT 115
K + WN ++S YAK G R + A E+F+ + +RD +SW +
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNS 221
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+I Y G + + ++ +M+ + T+ SVL C G LS GK VHS +K+
Sbjct: 222 MISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKST 281
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
+N +N+LL+MY+K GD A VF+ M +NV SW +++ + GR D A
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQ 341
Query: 236 QM----IERDVVTWNSMI-----AGYSQNGYDFE-------------------------- 260
QM ++ DVV S++ +G NG D
Sbjct: 342 QMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCG 401
Query: 261 ----ALGMFANM-LKD--------SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
A +F+ M +KD LKPD T+A L ACA+L L+ GK+IH YI+R
Sbjct: 402 SMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRN 461
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ + V NAL+ D Y+K G +G AR
Sbjct: 462 GYSSDRHVANALV---------------------------------DLYVKCGVLGLARL 488
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+FD + +D+V+WT M+ GY +G +A+ F M G +P+ + ++L S
Sbjct: 489 LFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 428 LDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
L+ G + + L ++ + S+ GN++ A + + W +++
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
+ E A ++ ER+ EL +P++ Y VL A + E+ + M + + K
Sbjct: 609 CGCRIYHDIELAEKVAERVFEL--EPENTGYY-VLLANIYAE-AEKWEEVKRMREKIGKK 664
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+ S +++ G+ L N P SLL R K + G
Sbjct: 665 GLRKNPGCSWIEIKGKVNLFVSGNN-----SSHPHSKKIESLLKKMR-RKMKEEGYFPKT 718
Query: 607 KLLLIEPDNSGAYSALC 623
K LI D ALC
Sbjct: 719 KYALINADEMQKEMALC 735
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/703 (35%), Positives = 397/703 (56%), Gaps = 53/703 (7%)
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS------FVVKTGLSG 178
+ K + ++++ L + T ++ C D K++ S F K
Sbjct: 2 KVKQKLHQAIDLLYSHGLASFDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSF-- 59
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
+ N LL++YAK G A+ VFD M ++V SWN ++S + G ++ FDQM
Sbjct: 60 ---IHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMP 116
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
RD V++N++IA ++ NG+ +AL + M +D +P +++ + L AC+ L L+ GK
Sbjct: 117 YRDSVSYNTLIACFASNGHSGKALKVLVRMQEDG-FQPTQYSHVNALQACSQLLDLRHGK 175
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
QIH I+ + V NA+ YAK G ++ A+ + + G+ NV+++ ++ GY+K
Sbjct: 176 QIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFD--GMIDKNVVSWNLMISGYVK 233
Query: 359 IGD-----------------------------------IGPARRIFDSLRDRDVVAWTAM 383
+G+ + AR +F L +D + WT M
Sbjct: 234 MGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTM 293
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+VGY QNG +DA LF M+R KP++YT+S+M+S + LASL HG+ +H + G
Sbjct: 294 IVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGI 353
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+S+ VS+AL+ MY K G AR +F + R ++W +MI+ AQ+G EA+ L+E
Sbjct: 354 DNSMLVSSALVDMYCKCGVTLDARVIFETMPIRN-VITWNAMILGYAQNGQVLEALTLYE 412
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
RM + KPD+IT+VGVL+AC + +V++GQ+Y++ + H I PT H+A M+ LLGR+
Sbjct: 413 RMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISE-HGIAPTLDHYACMITLLGRS 471
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G + +A + I+ MP EP+ W +LLS C +L ++AA L ++P N+G Y L
Sbjct: 472 GSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLS 530
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
NLY++CG+W+D A +R MK KK +SWV++ NKVH F ED HP+ IY ++
Sbjct: 531 NLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELN 590
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT-LRIMKNL 742
++ ++++G+ PDT VLH+V E+ K + + +HSEKLA+AF LI P +RI+KN+
Sbjct: 591 RLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNI 650
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC+DCH +KF + R I++RD+ RFHHF G CSC D W
Sbjct: 651 RVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 241/493 (48%), Gaps = 72/493 (14%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
F+ N L++ YAK +S A+ VFD M + + SWNT+LSAYAK G ++ VF+ MP R
Sbjct: 59 FIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR 118
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
DSVS+ T+I + G A+++ V M +D PTQ++ + L +C+ L DL GK++H
Sbjct: 119 DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIH 178
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI------ 222
+V L V N++ +MYAK GD A+ +FDGM KNV SWN+++S ++
Sbjct: 179 GRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPN 238
Query: 223 -----------------------------HSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
GR+D AR F ++ ++D + W +MI GY+
Sbjct: 239 ECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYA 298
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
QNG + +A +F +ML+ ++KPD +T++S +S+CA L L G+ +H ++ D +
Sbjct: 299 QNGREEDAWMLFGDMLR-RNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSM 357
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V +AL+ Y K G A+ I E I NVI + +
Sbjct: 358 LVSSALVDMYCKCGVTLDARVIFETMPIR--NVITWNAM--------------------- 394
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++GY QNG +A+ L+ M +E KP+N T +LS + + G++
Sbjct: 395 ----------ILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQK 444
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
S G A +L +IT+ ++G+++ A + + W++++ A+
Sbjct: 445 YFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGD 504
Query: 494 LGE---EAIQLFE 503
L A LFE
Sbjct: 505 LKNAELAASHLFE 517
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 77/415 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H RI+ L + F++N++ + YAK I A+ +FD M K + SWN ++S Y K
Sbjct: 174 GKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVK 233
Query: 92 Q-----------------------------------GRLDLACEVFNLMPNRDSVSWTTI 116
GR+D A +F +P +D + WTT+
Sbjct: 234 MGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTM 293
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
IV Y + GR ++A +F +M++ V P +T++S+++SC L L G+ VH VV G+
Sbjct: 294 IVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGI 353
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
+ V+++L++MY K G + A+ +F+ M ++NV +W
Sbjct: 354 DNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITW---------------------- 391
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
N+MI GY+QNG EAL ++ M + + KPD T LSAC N + +K
Sbjct: 392 ---------NAMILGYAQNGQVLEALTLYERM-QQENFKPDNITFVGVLSACINADMVKE 441
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY-LNVIAFTTLLDG 355
G++ I T +I+ + G V+ A +++ G+ + N ++TLL
Sbjct: 442 GQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQ--GMPHEPNYRIWSTLLSV 499
Query: 356 YIKIGDIG----PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
K GD+ A +F+ L R+ + + Y G KD V + RS+++E
Sbjct: 500 CAK-GDLKNAELAASHLFE-LDPRNAGPYIMLSNLYAACGRWKD-VAVVRSLMKE 551
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 83/192 (43%), Gaps = 32/192 (16%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ G++VH +++ G+ S+ + ++L++ Y K A+ +F+ MP++ + +WN ++ Y
Sbjct: 339 YHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGY 398
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A+ G++ A+ ++ M Q+ P T
Sbjct: 399 AQNGQV-------------------------------LEALTLYERMQQENFKPDNITFV 427
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RL 208
VL++C + G+K + + G++ ++ ++ + + G A + GM
Sbjct: 428 GVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHE 487
Query: 209 KNVSSWNVVVSL 220
N W+ ++S+
Sbjct: 488 PNYRIWSTLLSV 499
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/736 (35%), Positives = 397/736 (53%), Gaps = 87/736 (11%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
NS+++ Y A+++FDEMP + + SWN ++S Y K ++ A VF +MP R+ V
Sbjct: 52 NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV 111
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SWT ++ Y + G A +F M P + V+ + G L G ++
Sbjct: 112 SWTAMVKGYVQEGMVVEAELLFWRM------PERNEVSWTVM----FGGLIDGGRIDD-- 159
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
A+ ++D M K+V + ++ GR+D AR
Sbjct: 160 ---------------------------ARKLYDMMPGKDVVASTNMIGGLCREGRVDEAR 192
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M ER+V+TW +MI GY QN A +F M + + + L TLS
Sbjct: 193 EIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLS----- 247
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
G +E A++ E + VIA
Sbjct: 248 -----------------------------------GRIEDAEEFFEVMPMK--PVIACNA 270
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
++ ++G+I ARR+FD + DRD W M+ YE+ G +A+ELF M R+G +P+
Sbjct: 271 MIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPS 330
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+L ++LSV ++LASL +G+Q+HA +R + V++ L+TMY K G + A+ VF+
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
++ + W S+I A HGLGEEA+++F M G P+ +T + +LTAC++GG +E
Sbjct: 391 RFP-SKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLE 449
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+G + M++ + PT H++ VD+LGRAG + +A I +M ++PD WG+LL A
Sbjct: 450 EGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGA 509
Query: 592 CRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQ 651
C+ H LDL ++AA+KL IEP+N+G Y L ++ +S KW D A +RK+M+ V K
Sbjct: 510 CKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFP 569
Query: 652 GFSWVQIQNKVHVF---GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
G SW+++ KVH+F G+ + HP++ I + K ++E G+ PD + VLHDV+E+
Sbjct: 570 GCSWIEVGKKVHMFTRGGIRN--HPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEE 627
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
K L HSE+LA+A+GL+ PE +R+MKNLRVC DCH+AIK I K+ +REI++RDA
Sbjct: 628 EKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDA 687
Query: 769 TRFHHFKKGLCSCRDY 784
RFHHF G CSCRDY
Sbjct: 688 NRFHHFNNGECSCRDY 703
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 128/302 (42%), Gaps = 49/302 (16%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ PSLIS L A L ++L+ G+ VHA +++C V++ + LM Y K
Sbjct: 329 PSFPSLISILSVCATL--ASLQ-----YGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGE 381
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ AK VFD P K + WN+I+S YA G + A +VF+ MP +S T
Sbjct: 382 LVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMP----LSGT--------- 428
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNV 182
+P + T+ ++L +C+ G L G ++ S K ++ V
Sbjct: 429 ------------------MPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ ++M + G A + + M +K + + W ++ RLDLA ++ E +
Sbjct: 471 YSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIE 530
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
I S N G A M K+ K S C+ +E +GK++H
Sbjct: 531 PENAGPYILLSSINA-SRSKWGDVAEMRKNMRTKN-----VSKFPGCSWIE---VGKKVH 581
Query: 302 AY 303
+
Sbjct: 582 MF 583
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/800 (31%), Positives = 424/800 (53%), Gaps = 80/800 (10%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
++G VHA ++K G H+ V L +L+N Y K I A +VFDE
Sbjct: 148 WLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDET--------------- 192
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
P ++ W TI++ ++++A+ +F M T T+
Sbjct: 193 ----------------PLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIV 236
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L +C L L+ GK++H +V++ G ++ NS+++MY++ +A+ FD
Sbjct: 237 KLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDH 296
Query: 210 NVSSWNVVVSLH----IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
N +SWN ++S + +G DL + ++ D++TWNS+++G+ G L F
Sbjct: 297 NSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNF 356
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+ L+ + KPD ++ S L A L LGK+IH YI+R++ + V +L+ Y K
Sbjct: 357 RS-LQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIK 415
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR---------- 375
++ A+ + + N+ A+ +L+ GY G A ++ + +++
Sbjct: 416 NDCLDKAEVVFHHTKNK--NICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWN 473
Query: 376 -----------------------------DVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+VV+WTAM+ G QN DA++ F M E
Sbjct: 474 SLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEE 533
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
KPN+ T+ +L + + L G++IH ++R G + ++ ALI MY K G + A
Sbjct: 534 NVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVA 593
Query: 467 RRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
VF I +++T+ W M++ A +G GEE LF+ M + G++PD IT+ +L+ C
Sbjct: 594 HEVFRNI--KEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCK 651
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
+ GLV G +Y++ MK + I PT H++ MVDLLG+AG L EA +FI +P + D W
Sbjct: 652 NSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIW 711
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
G++L+ACR+HK++ + +IAA LL +EP NS Y+ + N+YS+ +W D +++SM +
Sbjct: 712 GAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTAL 771
Query: 646 GVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDV 705
GVK +SW+Q++ +HVF E HP+ IY ++ ++ EIK++G+V D V ++
Sbjct: 772 GVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNI 831
Query: 706 EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
++ KE++L H+EKLA+ +GL+ T + +R++KN R+C+DCH+ K+I +REI +
Sbjct: 832 DDSEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFL 891
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RD RFHHF G CSC+D W
Sbjct: 892 RDGGRFHHFMNGECSCKDRW 911
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 233/517 (45%), Gaps = 76/517 (14%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LLQ+ K R GK +H +I+ G + + NS+++ Y++ + A+ FD
Sbjct: 238 LLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHN 297
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFV 134
SWN+I+S+YA L+ A ++ M + D ++W +++ + G ++N + F
Sbjct: 298 SASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFR 357
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+ P ++TS L + LG + GK++H +++++ L V V SL++ Y K
Sbjct: 358 SLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKND 417
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
A+ VF + KN+ +WN ++S + + G D A +QM I+ D+VTWNS+++
Sbjct: 418 CLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVS 477
Query: 251 GYSQNGYDFEALGM----------------------------------FANMLKDSSLKP 276
GYS +G EAL + F + +++ ++KP
Sbjct: 478 GYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKP 537
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ T+ + L ACA LK+G++IH + +R F + ALI Y K G +++A +
Sbjct: 538 NSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHE-- 595
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+F +++++ + W M++GY G ++
Sbjct: 596 -------------------------------VFRNIKEKTLPCWNCMMMGYAIYGHGEEV 624
Query: 397 VELFRSMVREGPKPNNYTLSAMLS-VSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
LF M + G +P+ T +A+LS +S +D K + ++ + ++
Sbjct: 625 FTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVD 684
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ KAG ++ A + + + + W +++ A H
Sbjct: 685 LLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLH 721
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 254/570 (44%), Gaps = 47/570 (8%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI-RMFVEMVQDQVL 142
+++ Y + G + A +VF + R+ + W + I + G + I +F E+ V
Sbjct: 69 SMMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVK 128
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+T VL C AL +L G +VH+ +VK G V+++ +L+N+Y K A V
Sbjct: 129 FDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQV 188
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD L+ WN +V ++ S + + +AL
Sbjct: 189 FDETPLQEDFLWNTIVMANLRSEKWE-------------------------------DAL 217
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + +S K T+ L AC L L GKQIH Y+IR + + N+++S
Sbjct: 218 ELFRRM-QSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSM 276
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVV 378
Y++ +E+A+ V N ++ +++ Y + A + + D++
Sbjct: 277 YSRNNRLELAR--VAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDII 334
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W ++L G+ G ++ + FRS+ G KP++ ++++ L L + GK+IH
Sbjct: 335 TWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYI 394
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEE 497
+RS + V +L+ Y K ++ A VF+ H + + + +W S+I GL +
Sbjct: 395 MRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFH--HTKNKNICAWNSLISGYTYKGLFDN 452
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A +L +M E GIKPD +T+ +++ + G E+ N +K++ + P + +M+
Sbjct: 453 AEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSL-GLTPNVVSWTAMI 511
Query: 558 DLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEP 613
+ +A F M E P+ +LL AC L +G +I +
Sbjct: 512 SGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFL 571
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
D+ +AL ++Y GK + A + +++K
Sbjct: 572 DDIYIATALIDMYGKGGKLKVAHEVFRNIK 601
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 190/437 (43%), Gaps = 53/437 (12%)
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEALGMFANMLKDSSLKPDKF 279
++ G + A F R+ + WNS I ++ G D E L +F L D +K D
Sbjct: 74 YLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKE-LHDKGVKFDSK 132
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
L L C L +L LG ++HA +++ F + ALI+ Y K G+
Sbjct: 133 ALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGI---------- 182
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
DG A ++FD ++ W +++ ++ +DA+EL
Sbjct: 183 --------------DG---------ANQVFDETPLQEDFLWNTIVMANLRSEKWEDALEL 219
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
FR M K + T+ +L L +L+ GKQIH +R G S+ S+ N++++MYS+
Sbjct: 220 FRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSR 279
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+ AR F+ + SW S+I + A + A L + M G+KPD IT+
Sbjct: 280 NNRLELARVAFDSTE-DHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNS 338
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKI-----KPTPSHFASMVDL---LGRAGLLQEAYN 571
+L+ G + QG Y N++ N + KP S + LG L +E +
Sbjct: 339 LLS-----GHLLQGS-YENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHG 392
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+I LE DV SL+ + LD ++ + N A+++L + Y+ G
Sbjct: 393 YIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHH---TKNKNICAWNSLISGYTYKGL 449
Query: 632 WEDAANIRKSMKYVGVK 648
+++A + MK G+K
Sbjct: 450 FDNAEKLLNQMKEEGIK 466
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/703 (35%), Positives = 385/703 (54%), Gaps = 68/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +LS Y K RL A VF+ M +DSV+W T+I Y ++GR + ++++F++M+ D +
Sbjct: 261 NGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFV 319
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++TS + +C GDL GK VH +++ +G N L++MYAK GD + A+ V
Sbjct: 320 PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEV 379
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD +D VTWNS+I GY+Q+GY E L
Sbjct: 380 -------------------------------FDTTKCKDSVTWNSLINGYTQSGYYKEGL 408
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M + KPD T LS + L + G+ IH +I+ F+A +GN
Sbjct: 409 ESFKMMKMER--KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGN----- 461
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+LLD Y K G++ ++F + D+++W
Sbjct: 462 ----------------------------SLLDVYAKCGEMDDLLKVFSYMSAHDIISWNT 493
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ ++ M EG P+ T+ +L + S LA GK+IH +SG
Sbjct: 494 VIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSG 553
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ + NALI MYSK G++ +VF + ++ V+WT++I A +G G++A++ F
Sbjct: 554 FESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGEGKKALKAF 612
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M G+ PD + ++ + AC+H G+V++G R+++ MK + ++P H+A +VDLL R
Sbjct: 613 QDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLAR 672
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+GLL +A FI +MP++PD WG+LLSACR N ++ + ++K+L + D++G Y +
Sbjct: 673 SGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLV 732
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y++ GKW+ +R SMK G+KK G SW++IQ +V+VF D Q D + + +
Sbjct: 733 SNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLL 792
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ + + G+V D LHDVEED K ML HSE+LAIAFGL++T + L +MKNL
Sbjct: 793 EYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNL 852
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCH+ K+I K++ REI+VRDA RFH FK G CSC D+W
Sbjct: 853 RVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 265/592 (44%), Gaps = 110/592 (18%)
Query: 3 TPNPPSLISPLEFY-AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
TP P EF + LL++ ++N + VH+ II GL LSV L++ YA+
Sbjct: 13 TPEPSQ-----EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQV 67
Query: 62 ESISYAKKVFDEM-PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ + VF + P + WN+I+ A +T+
Sbjct: 68 KDPISSVSVFRSISPTNNVYLWNSIIRA-----------------------------LTH 98
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
N G F A+ + EM + ++ P FT SV+ SC + DL G VH ++ G +
Sbjct: 99 N--GLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDL 156
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+ N+L++MY++ D A+ VF+ M ++ SW
Sbjct: 157 YIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW-------------------------- 190
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
NS+I+GY NG+ +AL M+ + + + + PD FT++S L AC +L +K G +
Sbjct: 191 -----NSLISGYCSNGFWEDALDMY-HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAV 244
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H I + +GN L+S Y K + A++
Sbjct: 245 HGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR-------------------------- 278
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
+F + +D V W M+ GY Q G ++ +V+LF M+ +G P+ ++++ +
Sbjct: 279 -------VFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIR 330
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
L GK +H + SG N LI MY+K G++ AA+ VF+ + ++V
Sbjct: 331 ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK-DSV 389
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NM 539
+W S+I Q G +E ++ F +M+++ KPD +T+V +L+ + + QG+ + ++
Sbjct: 390 TWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDV 448
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+K + + + S++D+ + G + + M D+++W +++++
Sbjct: 449 IKFGFEAELIIGN--SLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIAS 497
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 15/199 (7%)
Query: 400 FRSMVREGPKPNNYTL-SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
F S P+P+ L S++L SS + + +H+ + SG + S+ S LI+ Y+
Sbjct: 6 FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ + ++ VF I W S+I AL +GL +A+ + M E ++PD T+
Sbjct: 66 QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125
Query: 519 GVLTACTH------GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
V+ +C G +V + +++ ++ VDL + +E N
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN- 184
Query: 573 IENMPLEPDVVAWGSLLSA 591
D V+W SL+S
Sbjct: 185 -------RDSVSWNSLISG 196
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/704 (34%), Positives = 409/704 (58%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y + G++ A + M N D V+W ++I Y + +K A+ F +M+
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ ++TS++A+ L +L AG ++H++V+K G + V N+L++MY+K
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC--------- 434
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+L + GR F +M ++D+++W ++IAGY+QN EAL
Sbjct: 435 ----------------NLTCYMGR------AFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ++ K ++ D+ L S L A + L+ + + K+IH +I+R
Sbjct: 473 ELFRDVAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK--------------- 516
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
L+ + L+D Y K ++G A R+F+S++ +DVV+WT+
Sbjct: 517 -------------------GLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ NG +AVELFR MV G ++ L +LS ++SL++L+ G++IH LR G
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ A++ MY+ G++ +A+ VF+ I R+ + +TSMI A HG G+ A++LF
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + PDHI+++ +L AC+H GL+++G+ + +M++ ++++P P H+ +VD+LGR
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
A + EA+ F++ M EP W +LL+ACR H ++G+IAA++LL +EP N G +
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+++ G+W D +R MK G++K G SW+++ KVH F D HP+ IY K+
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 683 AKIWDEI-KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+++ ++ +E+G+V DT VLH+V+E K QML HSE++AIA+GL+ TP+ LRI KN
Sbjct: 857 SEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKN 916
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+ K + KL R+IV+RDA RFHHF+ GLCSC D W
Sbjct: 917 LRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 156/599 (26%), Positives = 274/599 (45%), Gaps = 121/599 (20%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
SP+E +A++L+ K R G+ +H+RI K + ++F A K V
Sbjct: 78 SPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT-------FPSFELDFLA-------GKLV 123
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
F Y K G LD A +VF+ MP+R + +W T+I Y G +A+
Sbjct: 124 F----------------MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASAL 167
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++ M + V + ++L +C L D+ +G ++HS +VK G + N+L++MY
Sbjct: 168 ALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
AK D A+ +FDG + K D V WNS+++
Sbjct: 228 AKNDDLSAARRLFDGFQEKG------------------------------DAVLWNSILS 257
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
YS +G E L +F M + P+ +T+ S L+AC KLGK+IHA ++++
Sbjct: 258 SYSTSGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 311 ATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
++ V NALI+ Y + G + A++I+ Q
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQ------------------------------- 345
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ + DVV W +++ GY QN + K+A+E F M+ G K + +++++++ S L++L
Sbjct: 346 --MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G ++HA ++ G S+L V N LI MYSK R F +H ++ +SWT++I
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH-DKDLISWTTVIAGY 462
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQ+ EA++LF + + ++ D + +L A + ++K++ +K
Sbjct: 463 AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS-------------VLKSMLIVKEI 509
Query: 550 PSHFA-----------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
H +VD+ G+ + A E++ DVV+W S++S+ ++ N
Sbjct: 510 HCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGN 567
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/630 (40%), Positives = 361/630 (57%), Gaps = 68/630 (10%)
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
A GDL GKK+H V+K G V V SL++MY++ G V D
Sbjct: 6 ACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFG------LVGD------------ 47
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
AR FD M RD +WN+MI+GY QNG EAL + A+ ++ +K
Sbjct: 48 -------------ARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDI-ADEMRLEGVKM 93
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D T+AS L CA + + GK IH Y+I+ + V NALI+ YAK
Sbjct: 94 DAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAK----------- 142
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
G +G A+++F L +DVV+W ++ GY QNGL +A
Sbjct: 143 ----------------------FGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEA 179
Query: 397 VELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
+E++ M E PN T ++L S + +L G +IH +++ S + V LI
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MY K G ++ A +F + R+ +V W +MI HG GE+A++LF M +KPDHI
Sbjct: 240 MYGKCGKLDDAISLFYQVP-RKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T+V +L+AC+H GLV Q +NMM+ + IKP+ H+ MVDL GRAG L+ A+NFI+
Sbjct: 299 TFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKK 358
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP++PD AWG+LL+ACR+H N++LGK A+E+L ++ +N G Y L N+Y++ GKWE
Sbjct: 359 MPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGV 418
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
++R + G++K G+S + + NKV VF + HP+ + IY ++ + +IK +G+V
Sbjct: 419 DDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYV 478
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
PD VL DVEED KE +L HSE+LAIA+G+IST T +RI KNLRVC DCH+ KFI
Sbjct: 479 PDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFI 538
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +REI+VRD++RFHHFK G CSC DYW
Sbjct: 539 SIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 203/478 (42%), Gaps = 97/478 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++K G VF+ SL++ Y++ + A+K+FD+M
Sbjct: 13 GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDM----------------- 55
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
P RD SW +I Y + G A+ + EM + V TV SV
Sbjct: 56 --------------PARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASV 101
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C +GD+ +GK +H +V+K GL + V+N+L+NMYAK G A+ VF G+ +K+V
Sbjct: 102 LPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDV 160
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW N++I GY+QNG EA+ ++ M +
Sbjct: 161 VSW-------------------------------NTLITGYAQNGLASEAIEVYLLMEEH 189
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ P++ T S L A +++ L+ G +IH +I+ + VG LI Y K G
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCG---- 245
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
K+ D A +F + ++ V W AM+ Y +G
Sbjct: 246 --------------------------KLDD---AISLFYQVPRKNSVPWNAMISCYGVHG 276
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVS 450
+ A+ELFR M E KP++ T ++LS S + + + G SL
Sbjct: 277 DGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHY 336
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ ++ +AG + A + + + +W +++ A HG E ER+ E+
Sbjct: 337 GCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEV 394
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 97/225 (43%), Gaps = 16/225 (7%)
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
V + L GK+IH L+ G + V+ +L+ MYS+ G + AR++F+ + R
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG- 61
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ--RYYN 538
SW +MI Q+G EA+ + + M G+K D IT VL C G + G+ Y
Sbjct: 62 SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
+ + + +M G G Q+ + L DVV+W +L++ +
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVFGL-----LIKDVVSWNTLITG---YAQN 173
Query: 599 DLGKIAAEKLLLIEP-----DNSGAYSALCNLYSSCGKWEDAANI 638
L A E LL+E N G + ++ YS G + I
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRI 218
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 120/280 (42%), Gaps = 46/280 (16%)
Query: 4 PNPPSLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
PN + +S L Y+H+ LQ ++ +H ++IK L+ VF+ L++ Y K
Sbjct: 194 PNQGTWVSILPAYSHVGALQQGMR---------IHGQVIKNCLYSDVFVGTCLIDMYGKC 244
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ A +F ++P K WN ++S Y G + A E+F
Sbjct: 245 GKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFR------------------ 286
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCV 180
EM ++V P T S+L++C+ G +S + + + + G+ +
Sbjct: 287 -------------EMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSL 333
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+++++ + G+ MA M ++ + S+W +++ G ++L + +++ E
Sbjct: 334 KHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFE 393
Query: 240 RDV--VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
D V + +++ N +E + ++ +D L+ +
Sbjct: 394 VDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKN 433
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/764 (34%), Positives = 407/764 (53%), Gaps = 88/764 (11%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLK-NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
SR +GK+ AR L NS+++ Y A+++FDEM + + SWN
Sbjct: 25 SRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNG 84
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S Y K + A VF LMP R+ VSWT ++ Y + G A +F M +
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN---- 140
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ + T + G + +K++ + + N+ L + G A+ +FD
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL----CREGRVDEARLIFD 196
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
MR +NV +W +++ + + R+D+AR F+ M E+ V+W SM+ GY+ +G +A
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M +KP + AC NA+I +
Sbjct: 257 FEVM----PMKP--------VIAC----------------------------NAMIVGFG 276
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+VG +I ARR+FD + DRD W M+
Sbjct: 277 EVG---------------------------------EISKARRVFDLMEDRDNATWRGMI 303
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
YE+ G +A++LF M ++G +P+ +L ++LSV ++LASL +G+Q+HA +R
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ V++ L+TMY K G + A+ VF+ ++ + W S+I A HGLGEEA+++F
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M G P+ +T + +LTAC++ G +E+G + M++ + PT H++ VD+LGRAG
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
+ +A IE+M ++PD WG+LL AC+ H LDL ++AA+KL EPDN+G Y L +
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF---GVEDWLHPQRDAIYNK 681
+ +S KW D A +RK+M+ V K G SW+++ KVH+F G+++ HP++ I
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKN--HPEQAMILMM 600
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ K ++E G+ PD + VLHDV+E+ K L HSE+LA+A+GL+ PE +R+MKN
Sbjct: 601 LEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKN 660
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+AIK I K+ +REI++RDA RFHHF G CSCRDYW
Sbjct: 661 LRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 40/240 (16%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ PSLIS L A L ++L+ G+ VHA +++C V++ + LM Y K
Sbjct: 329 PSFPSLISILSVCATL--ASLQ-----YGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ AK VFD K + WN+I+S YA G + A ++F+ MP+ +
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT------------- 428
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNV 182
+P + T+ ++L +C+ G L G ++ S K ++ V
Sbjct: 429 ------------------MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ ++M + G A + + M +K + + W ++ RLDLA ++ E +
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENE 530
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/677 (35%), Positives = 386/677 (57%), Gaps = 40/677 (5%)
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
D+V+ V GR ++A+R V F+ + +C AL L +++H
Sbjct: 72 DTVATKDEFVRLCATGRLRDALRRPFRGVLWSDAARLFS--HLFRACRALRPL---RQLH 126
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+F +G + N L+ YA +GD A+ +F+ + +NV SWN++ +I +G L
Sbjct: 127 AFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLG 186
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AR FD+M ER+V TWN+M+AG + G+D E+LG F +M ++ + PD+F L S C
Sbjct: 187 GARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREG-MHPDEFGLGSVFRCC 245
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
A L + G+Q+HAY++R+ D VG++L Y + G ++ + ++
Sbjct: 246 AGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL------------ 293
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
R+ SL +V+ ++ G QNG ++ A+E F M G
Sbjct: 294 ------------------RMLPSL---SIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGV 332
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
+ T + +S S LA+L G+QIH +++G + V L+ MYS+ G + + R
Sbjct: 333 AADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSER 392
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF + +T ++MI A HG G++AI+LF++M+ G +P +T++ +L AC+H G
Sbjct: 393 VF-FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSG 451
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L E+G + +M + ++P+ H+ +VDLLGR+G L EA I +MPL PD V W +L
Sbjct: 452 LKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTL 511
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC+ KN D+ + A++++ ++P +S +Y L N+ ++ +W D + +RK+M+ V+
Sbjct: 512 LSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVR 571
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G SWV+++ +H F D HP++ I + ++ +I++ G+ PD + VLHD+E++
Sbjct: 572 KEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDE 631
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE L HHSEKLAIAF +S PE +R+MKNLRVC+DCH AIK + ++ REIVVRD
Sbjct: 632 EKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDV 691
Query: 769 TRFHHFKKGLCSCRDYW 785
+RFHHFK G CSCRDYW
Sbjct: 692 SRFHHFKDGRCSCRDYW 708
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 225/506 (44%), Gaps = 70/506 (13%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
++HL ++ ++ P + +HA G F N LM YA ++ A+++F+
Sbjct: 107 RLFSHLFRA-CRALRPL--RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFER 163
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
+P + + SWN + Y K G L A ++F+ MP R+ +W ++ +G + ++ F
Sbjct: 164 IPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFF 223
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
++M ++ + P +F + SV C L D+ G++VH++VV++GL + V +SL +MY +
Sbjct: 224 LDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC 283
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G +AV ++ SL I V+ N++IAG +
Sbjct: 284 GCLQEGEAVL-----------RMLPSLSI--------------------VSCNTIIAGRT 312
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
QNG AL F M++ + D T S +S+C++L L G+QIH +++ D
Sbjct: 313 QNGDSEGALEYFC-MMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVV 371
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
PV T L+ Y + G +G + R+F
Sbjct: 372 PV---------------------------------MTCLVHMYSRCGCLGDSERVFFGYC 398
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D +AM+ Y +G + A+ELF+ M+ G +P++ T A+L S + G
Sbjct: 399 GSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMD 458
Query: 434 IHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++ G S+ ++ + ++G ++ A + + + V W +++ A
Sbjct: 459 CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQ 518
Query: 493 GLGEEAIQLFERMLELGIKPDHITYV 518
+ A ++ +R++EL D +YV
Sbjct: 519 KNFDMAERIAKRVIELD-PHDSASYV 543
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 259/780 (33%), Positives = 412/780 (52%), Gaps = 71/780 (9%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+S + + L+ K+ + G L+ ++ CG+ + + ++ A SI +
Sbjct: 158 VSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEV 217
Query: 70 V---FDEMPVKTLCS-WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
V +++ + C+ N +++ YAK R A VF+ MP+RD +SW ++I G
Sbjct: 218 VHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGL 277
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
+ AI +FV M + T+ SVL +C L L G+ VH + VKTG ++ N
Sbjct: 278 YDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANV 337
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
LL+MY+ N S W + F M++++VV+W
Sbjct: 338 LLDMYS------------------NCSDWRSTNKI-------------FRNMVQKNVVSW 366
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
+MI Y++ G + G+F M + + +PD F + S L A A E LK GK +H Y I
Sbjct: 367 TAMITSYTRAGLYDKVAGLFQEMGLEGT-RPDIFAITSALHAFAGNELLKHGKSVHGYAI 425
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R + V NAL ++ Y+K G++ A
Sbjct: 426 RNGMEKVLAVTNAL---------------------------------MEMYVKCGNMEEA 452
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
+ IFD + +D+++W ++ GY +N L +A LF M+ + +PN T++ +L ++SL
Sbjct: 453 KLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASL 511
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
+SL+ G+++HA ALR G V+NALI MY K G + ARR+F+ + + +SWT M
Sbjct: 512 SSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLS-NKNLISWTIM 570
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
+ HG G +AI LFE+M GI PD ++ +L AC+H GL ++G R+++ M+ HK
Sbjct: 571 VAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHK 630
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I+P H+ MVDLL G L+EAY FI++MP+EPD W SLL CR+H+N+ L + A
Sbjct: 631 IEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVA 690
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
E++ +EP+N+G Y L N+Y+ +WE ++ + G+++ G SW++ + KVHVF
Sbjct: 691 ERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVF 750
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
++ HPQ I + ++ ++E G P L + V + L HS KLA+AF
Sbjct: 751 IADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAF 810
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
G+++ E +R+ KN RVC+ CH A KFI K+ REI++RD+ RFHHF++G CSCR YW
Sbjct: 811 GVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 199/461 (43%), Gaps = 99/461 (21%)
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ---------------------------- 140
D+V +++ Y + G +NA R+F EM Q
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187
Query: 141 ----VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
V P +T++ VL LG + G+ VH + K G V N+L+ YAK
Sbjct: 188 HCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRT 247
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A VFDGM ++V SW NSMI+G + NG
Sbjct: 248 KDAILVFDGMPHRDVISW-------------------------------NSMISGCTSNG 276
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+A+ +F M + + D TL S L ACA L L LG+ +H Y ++T F + +
Sbjct: 277 LYDKAIELFVRMWLEGE-ELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLA 335
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LLD Y D +IF ++ ++
Sbjct: 336 N---------------------------------VLLDMYSNCSDWRSTNKIFRNMVQKN 362
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+WTAM+ Y + GL LF+ M EG +P+ + +++ L + L HGK +H
Sbjct: 363 VVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHG 422
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+R+G L+V+NAL+ MY K GN+ A+ +F+ + ++ +SW ++I +++ L
Sbjct: 423 YAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGV-VSKDMISWNTLIGGYSRNNLAN 481
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
EA LF ML L ++P+ +T +L A +E+G+ +
Sbjct: 482 EAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMH 521
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 183/438 (41%), Gaps = 91/438 (20%)
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EALG+ S D + + L C+ + L+ GK+ H +++R + N L
Sbjct: 79 EALGLLG------SDGVDDRSYGAVLQLCSEVRSLEGGKRAH-FLVRASSLGRDGMDNVL 131
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD-RDVV 378
QK+V Y+K GD+ ARR+FD + DV
Sbjct: 132 ------------GQKLVLM-----------------YLKCGDLENARRVFDEMPQVSDVR 162
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
WTA++ GY + G ++ V LFR M G +P+ YT+S +L + L S++ G+ +H
Sbjct: 163 VWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLL 222
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+ G S +V NAL+ Y+K+ A VF+ + R + +SW SMI +GL ++A
Sbjct: 223 EKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHR-DVISWNSMISGCTSNGLYDKA 281
Query: 499 IQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVEQG--------QRYYNM 539
I+LF RM G + D T + VL AC HG V+ G +M
Sbjct: 282 IELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDM 341
Query: 540 MKNVHKIKPTPSHFASMVDL-----------LGRAGLLQEAYNFIENMPLE---PDVVAW 585
N + T F +MV RAGL + + M LE PD+ A
Sbjct: 342 YSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAI 401
Query: 586 GSLLSACRVHKNLDLGKI--------AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
S L A ++ L GK EK+L + +AL +Y CG E+A
Sbjct: 402 TSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVT-------NALMEMYVKCGNMEEAKL 454
Query: 638 IRKSMKYVGVKKTQGFSW 655
I + GV SW
Sbjct: 455 I-----FDGVVSKDMISW 467
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/637 (38%), Positives = 376/637 (59%), Gaps = 50/637 (7%)
Query: 151 VLASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNSLLNMYAK-VGDEMMAKAVFDGMRL 208
++AS GD+ + +V VK+ ++ NS+L +AK G A+ +F+ +
Sbjct: 47 LIASYVRCGDIDSAVRVFEDMKVKSTVTW-----NSILAAFAKKPGHFEYARQLFEKIPQ 101
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
N S+N++++ H H + AR FD M +DV +WN+MI+ +Q G EA +F+ M
Sbjct: 102 PNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAM 161
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
P+K ++ + A++S Y G
Sbjct: 162 -------PEKNCVSWS---------------------------------AMVSGYVACGD 181
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ A + + + +VI +T ++ GY+K G + A R+F + R +V W AM+ GY
Sbjct: 182 LDAAVECFYAAPMR--SVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYV 239
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+NG +D + LFR+M+ G KPN +L+++L S+L++L GKQ+H + +S +
Sbjct: 240 ENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTT 299
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+L++MYSK G++ A +F I R++ V W +MI AQHG G++A++LF+ M +
Sbjct: 300 AGTSLVSMYSKCGDLKDAWELFIQIP-RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKE 358
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+KPD IT+V VL AC H GLV+ G +Y+N M+ I+ P H+A MVDLLGRAG L E
Sbjct: 359 GLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSE 418
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A + I++MP +P +G+LL ACR+HKNL+L + AA+ LL ++P + Y L N+Y++
Sbjct: 419 AVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAA 478
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
+W+ A+IR+SMK V K G+SW++I + VH F D LHP+ +I+ K+ + +
Sbjct: 479 QNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKK 538
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
+K G+VPD VLHDV E++KEQ+L HSEKLAIAFGL+ P +R+ KNLRVC DC
Sbjct: 539 MKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDC 598
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HSA K+I + REI+VRD TRFHHFK G CSCRDYW
Sbjct: 599 HSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 203/376 (53%), Gaps = 21/376 (5%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ-GRLDLACEVFNLM 105
+V N L+ Y + I A +VF++M VK+ +WN+IL+A+AK+ G + A ++F +
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 106 PNRDSVSWTTIIVT-YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
P ++VS+ ++ ++ +G + R F + + + + + T+ S LA +G+
Sbjct: 100 PQPNTVSYNIMLACHWHHLG--VHDARGFFDSMPLKDVASWNTMISALAQVGLMGE---A 154
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
+++ S + + CV+ + ++++ Y GD A F +++V +W +++ ++
Sbjct: 155 RRLFSAMPE---KNCVSWS-AMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKF 210
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
GR++LA F +M R +VTWN+MIAGY +NG + L +F ML ++ +KP+ +L S
Sbjct: 211 GRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTML-ETGVKPNALSLTSV 269
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C+NL L+LGKQ+H + + + G +L+S Y+K G ++ A ++ Q I
Sbjct: 270 LLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQ--IPRK 327
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELF 400
+V+ + ++ GY + G A R+FD ++ D + + A+L+ GL V+ F
Sbjct: 328 DVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYF 387
Query: 401 RSMVRE---GPKPNNY 413
+M R+ KP +Y
Sbjct: 388 NTMRRDFGIETKPEHY 403
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH-GLGEEAIQLFERMLEL 508
SN LI Y + G+I++A RVF + + TV+W S++ A A+ G E A QLFE++ +
Sbjct: 44 SNKLIASYVRCGDIDSAVRVFEDMK-VKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQ- 101
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
P+ ++Y +L H V + +++ M +K S + +M+ L + GL+ E
Sbjct: 102 ---PNTVSYNIMLACHWHHLGVHDARGFFDSM----PLKDVAS-WNTMISALAQVGLMGE 153
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG-AYSALCNLYS 627
A MP E + V+W +++S +LD AA + P S ++A+ Y
Sbjct: 154 ARRLFSAMP-EKNCVSWSAMVSGYVACGDLD----AAVECFYAAPMRSVITWTAMITGYM 208
Query: 628 SCGKWEDAANIRKSM 642
G+ E A + + M
Sbjct: 209 KFGRVELAERLFQEM 223
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN SL S L L SNL + +GK VH + KC L SL++ Y+K
Sbjct: 261 PNALSLTSVL-----LGCSNLSALQ--LGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGD 313
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ A ++F ++P K + WN ++S YA+ G A +F+ M D +++ +++
Sbjct: 314 LKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLA 373
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQ 145
N G ++ F M +D + T+
Sbjct: 374 CNHAGLVDLGVQYFNTMRRDFGIETK 399
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 270/845 (31%), Positives = 434/845 (51%), Gaps = 104/845 (12%)
Query: 11 SPLEFYAHLLQS-NLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+P F A+ L++ + S + + ARI+K G N ++ ++ + A++
Sbjct: 5 APPPFRANQLKTLHGASSRQTLQTCIDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQ 64
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
+ D+MP + S + I+S Y K G L +A +F+ R V+WTT+I Y++ RF +A
Sbjct: 65 LLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDA 124
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
++F EM + P T ++L C L + H+ +VK G V N+LL+
Sbjct: 125 FKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDS 184
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K +G LD AR F +M D V++N MI
Sbjct: 185 YFK-------------------------------TGGLDSARRLFLEMCGWDSVSFNVMI 213
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GY+ NG + EA+ +F M ++ KP FT A+ +SA L+ G+QIH ++++T F
Sbjct: 214 TGYANNGLNEEAIELFVEM-QNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSF 272
Query: 310 DATGPVG-------------------------------NALISCYAKVGGVEIAQKIVEQ 338
VG N +I+ YA VG V+ + + ++
Sbjct: 273 IRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQE 332
Query: 339 SGISYLNVIAF-------------------------------------TTLLDGYIKIGD 361
+ + F +L+D Y K G
Sbjct: 333 LQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGK 392
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
A RIF L R V WTAM+ Q GL+++ ++LF M R + T + +L
Sbjct: 393 FEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKA 452
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S++LAS+ GKQ+H+ +RSG + S AL+ MY+ +I A + F + R V+
Sbjct: 453 SANLASILLGKQLHSCVIRSGFMNVYS-GCALLDMYANCASIKDAIKTFEEMSERN-VVT 510
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +++ A AQ+G G+ ++ FE M+ G +PD ++++ +LTAC+H LVE+G +Y+N M
Sbjct: 511 WNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMS 570
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
V+ + P H+ +MVD L R+G EA + MP EPD + W S+L++CR+HKN L
Sbjct: 571 GVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALA 630
Query: 602 KIAAEKLLLIEP-DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
+ AA +L ++ ++ Y + N+++ G+W+ ++K+M+ GV+K +SWV+I++
Sbjct: 631 RKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKH 690
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KVHVF D HPQ+ I K+ + +++++ G+ PD + +V+++ K L++HSE+
Sbjct: 691 KVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSER 750
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAF LI+TPE + + +MKNLR C DCH+AIK I K+V REI VRD+ RFHHF+ G CS
Sbjct: 751 LAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCS 810
Query: 781 CRDYW 785
C DYW
Sbjct: 811 CGDYW 815
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 264/784 (33%), Positives = 408/784 (52%), Gaps = 95/784 (12%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
P P + P++ LL+ S G+ +H +I T
Sbjct: 21 VPKPKKPLFPIDRLNELLKVCANSSYLRTGESIHGHLIV-------------------TN 61
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
S AK V+ N++++ Y K G A +VF+LMP R+ VSW ++ Y
Sbjct: 62 QSSRAKDVY---------QINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQN 112
Query: 123 IGRFKNAIRMFVEMV-QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
G +++F MV D+ P +F T V SC++ G + GK+ H +K+GL
Sbjct: 113 SGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEF 172
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V N+L+ MY+ + SG + R D + D
Sbjct: 173 VRNTLVYMYS------------------------------LCSGNGEAIRV-LDDLPYCD 201
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+ ++S ++GY + G E + M K+ L D T S L C+NL L L +QIH
Sbjct: 202 LSVFSSALSGYLECGAFKEGAEVLRRMAKE-DLVLDNITYLSCLRLCSNLRDLNLARQIH 260
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+ ++R F++ A+I+ Y K G V AQ++ + + N++ TT++D Y
Sbjct: 261 SRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQ--NIVLNTTIMDAYF---- 314
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
Q+ ++A+ LF M + PN YT + L+
Sbjct: 315 ---------------------------QDKSFEEALNLFSKMDTKEVPPNEYTFAISLNS 347
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L+ L HG +H L+SG + + V NAL+ MY+K+G+I AR+ F+ + +R + V+
Sbjct: 348 IAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVT 406
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +MI + HGLG E ++ F+RM+ G P+ IT++GVL AC+H G VEQG Y+N +
Sbjct: 407 WNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLM 466
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
++P H+ +V LL +AG+ ++A +F+ P+E DVVAW +LL+AC V +N LG
Sbjct: 467 KKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRLG 526
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
K AE + P++SG Y L N+++ +WE A +R M GVKK G SW+ I+N+
Sbjct: 527 KKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRNQ 586
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
HVF E+ HP+ IY K+ ++ +I+ +G+ PD A V HDV+E+ +E L +HSEKL
Sbjct: 587 THVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEKL 646
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+A+GL+ TPEN+ L + KN+R+C+DCHSAIK I K+ R IV+RD+ RFHHF+ G CSC
Sbjct: 647 AVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCSC 706
Query: 782 RDYW 785
DYW
Sbjct: 707 CDYW 710
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 265/691 (38%), Positives = 407/691 (58%), Gaps = 43/691 (6%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
VF+ + R+S+SW +II Y+ G +A +F M Q + L F + + L +
Sbjct: 260 VFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM-QKEGLGFSFKPNDAFSEFSVLEE 318
Query: 161 -LSAGKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G++VH+ V++TGL+ V + N L+NMYAK G A +VF+ M K+ SWN ++
Sbjct: 319 GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLI 378
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EALGMFANMLKDSSLKPD 277
S + + A F M E D V+WNS+I S + +A+ F M++
Sbjct: 379 SGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR-GGWGLS 437
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+ T + LSA ++L ++ QIHA +++ +GNAL+SCY K G
Sbjct: 438 RVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCG---------- 487
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD-RDVVAWTAMLVGYEQNGLNKDA 396
++ +IF + + RD V+W +M+ GY N L A
Sbjct: 488 -----------------------EMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKA 524
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++L M+++G + +++T + +LS +S+A+L+ G ++HA +R+ S + V +AL+ M
Sbjct: 525 MDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDM 584
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YSK G I+ A R F L+ R SW SMI A+HG GE+A++LF RM+ G PDH+T
Sbjct: 585 YSKCGRIDYASRFFELMPLRN-VYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVT 643
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+VGVL+AC+H G VE+G ++ M V+++ P HF+ MVDLLGRAG L E +FI +M
Sbjct: 644 FVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSM 703
Query: 577 PLEPDVVAWGSLLSA-CRVH-KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
P++P+V+ W ++L A CR + +N +LG+ AAE LL +EP N+ Y L N+Y+S KWED
Sbjct: 704 PMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWED 763
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A R +MK VKK G SWV +++ VHVF D LHP++D IY+K+ ++ ++++ G+
Sbjct: 764 VAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGY 823
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
+P T L D+E + KE++L +HSEK+A+AF +++ +RIMKNLRVC DCHSA +
Sbjct: 824 IPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGY 882
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I K+V R+IV+RD+ RFHHF+ G CSC DYW
Sbjct: 883 ISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 164/648 (25%), Positives = 289/648 (44%), Gaps = 81/648 (12%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
+L S E + L+ S + +H + IK G ++FL N+L+N Y + + A
Sbjct: 94 TLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSA 153
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+K+FDEM + L +W ++S Y + G+ D AC RF+
Sbjct: 154 QKLFDEMSNRNLVTWACLISGYTQNGKPDEAC------------------------ARFR 189
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALG--DLSAGKKVHSFVVKTGLSGCVNVTNS 185
+MV+ +P + S L +C G G ++H + KT V V N
Sbjct: 190 -------DMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNV 242
Query: 186 LLNMYAKVGDEMM-AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
L++MY D A++VFDG+ ++N SWN ++S+
Sbjct: 243 LISMYGSCLDSANDARSVFDGIGIRNSISWNSIISV------------------------ 278
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDS---SLKP-DKFTLASTLSACANLEKLKLGKQI 300
YS+ G A +F++M K+ S KP D F+ S L E + G+++
Sbjct: 279 -------YSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE-----EGRRKGREV 326
Query: 301 HAYIIRTEF-DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
HA++IRT D +GN L++ YAK G + A + E + + +++ +L+ G +
Sbjct: 327 HAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL--MVEKDSVSWNSLISGLDQN 384
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN-KDAVELFRSMVREGPKPNNYTLSAM 418
A +F + + D V+W +++ + + AV+ F M+R G + T +
Sbjct: 385 ECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINI 444
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
LS SSL+ + QIHA L+ + ++ NAL++ Y K G +N ++F + ++
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 504
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSW SMI + L +A+ L M++ G + D T+ +L+AC +E+G +
Sbjct: 505 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHA 564
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
++ +++VD+ + G + A F E MPL +V +W S++S H +
Sbjct: 565 CGIRA-CLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHG 622
Query: 599 DLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
+ K+ +L +P + + + + S G E+ KSM V
Sbjct: 623 EKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEV 670
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 229/487 (47%), Gaps = 79/487 (16%)
Query: 32 GKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VHA +I+ GL+ + V + N L+N YAK+ +I+ A VF+ M K SWN+++S
Sbjct: 323 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 382
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI-GRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ + A E+F+LMP D VSW ++I ++ A++ F++M++ ++ T
Sbjct: 383 QNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFI 442
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RL 208
++L++ ++L ++H+ V+K LS + N+LL+ Y K G+ + +F M
Sbjct: 443 NILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET 502
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++ SW NSMI+GY N +A+ + M
Sbjct: 503 RDEVSW-------------------------------NSMISGYIHNELLHKAMDLVWFM 531
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ + D FT A+ LSACA++ L+ G ++HA IR ++ VG+AL+ Y+K G
Sbjct: 532 MQKGQ-RLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGR 590
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ A + E + P R ++ +W +M+ GY
Sbjct: 591 IDYASRFFE------------------------LMPLRNVY---------SWNSMISGYA 617
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
++G + A++LF M+ +G P++ T +LS S + ++ G + H ++ S
Sbjct: 618 RHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPR 676
Query: 449 VS--NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG-----LGEEAIQL 501
V + ++ + +AG ++ N + + + W +++ A + LG A ++
Sbjct: 677 VEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEM 736
Query: 502 FERMLEL 508
+LEL
Sbjct: 737 ---LLEL 740
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/677 (35%), Positives = 386/677 (57%), Gaps = 40/677 (5%)
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
D+V+ V GR ++A+R V F+ + +C AL L +++H
Sbjct: 10 DTVATKDEFVRLCATGRLRDALRRPFRGVLWSDAARLFS--HLFRACRALRPL---RQLH 64
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+F +G + N L+ YA +GD A+ +F+ + +NV SWN++ +I +G L
Sbjct: 65 AFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLG 124
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AR FD+M ER+V TWN+M+AG + G+D E+LG F +M ++ + PD+F L S C
Sbjct: 125 GARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREG-MHPDEFGLGSVFRCC 183
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
A L + G+Q+HAY++R+ D VG++L Y + G ++ + ++
Sbjct: 184 AGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL------------ 231
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
R+ SL +V+ ++ G QNG ++ A+E F M G
Sbjct: 232 ------------------RMLPSL---SIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGV 270
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
+ T + +S S LA+L G+QIH +++G + V L+ MYS+ G + + R
Sbjct: 271 AADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSER 330
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF + +T ++MI A HG G++AI+LF++M+ G +P +T++ +L AC+H G
Sbjct: 331 VF-FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSG 389
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L E+G + +M + ++P+ H+ +VDLLGR+G L EA I +MPL PD V W +L
Sbjct: 390 LKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTL 449
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC+ KN D+ + A++++ ++P +S +Y L N+ ++ +W D + +RK+M+ V+
Sbjct: 450 LSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVR 509
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G SWV+++ +H F D HP++ I + ++ +I++ G+ PD + VLHD+E++
Sbjct: 510 KEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDE 569
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE L HHSEKLAIAF +S PE +R+MKNLRVC+DCH AIK + ++ REIVVRD
Sbjct: 570 EKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDV 629
Query: 769 TRFHHFKKGLCSCRDYW 785
+RFHHFK G CSCRDYW
Sbjct: 630 SRFHHFKDGRCSCRDYW 646
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 225/505 (44%), Gaps = 70/505 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
++HL ++ ++ P + +HA G F N LM YA ++ A+++F+ +
Sbjct: 46 LFSHLFRA-CRALRPL--RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERI 102
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + SWN + Y K G L A ++F+ MP R+ +W ++ +G + ++ F+
Sbjct: 103 PRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFL 162
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+M ++ + P +F + SV C L D+ G++VH++VV++GL + V +SL +MY + G
Sbjct: 163 DMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 222
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+AV ++ SL I V+ N++IAG +Q
Sbjct: 223 CLQEGEAVL-----------RMLPSLSI--------------------VSCNTIIAGRTQ 251
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG AL F M++ + D T S +S+C++L L G+QIH +++ D P
Sbjct: 252 NGDSEGALEYFC-MMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 310
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V T L+ Y + G +G + R+F
Sbjct: 311 V---------------------------------MTCLVHMYSRCGCLGDSERVFFGYCG 337
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D +AM+ Y +G + A+ELF+ M+ G +P++ T A+L S + G
Sbjct: 338 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 397
Query: 435 HASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ G S+ ++ + ++G ++ A + + + V W +++ A
Sbjct: 398 FELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQK 457
Query: 494 LGEEAIQLFERMLELGIKPDHITYV 518
+ A ++ +R++EL D +YV
Sbjct: 458 NFDMAERIAKRVIELD-PHDSASYV 481
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/702 (35%), Positives = 383/702 (54%), Gaps = 67/702 (9%)
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+C NT+L YA GR A VF MP +D +SW +++ ++ GR +A+ + M+
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
T TS LA+C G+ +H VV +GL + N+L++MY K+G+
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE-- 395
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+ +R QM RDVV WN++I GY+++
Sbjct: 396 -----------------------------MSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKLGKQIHAYIIRTEFDATGPVG 316
+AL F M + + + T+ S LSAC + L+ GK +HAYI+ F++ V
Sbjct: 427 PDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N+LI+ YAK G D+ ++ +F+ L +R+
Sbjct: 486 NSLITMYAKCG---------------------------------DLSSSQDLFNGLDNRN 512
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
++ W AML +G ++ ++L M G + ++ S LS ++ LA L+ G+Q+H
Sbjct: 513 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG 572
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A++ G + NA MYSK G I ++ + SW +I AL +HG E
Sbjct: 573 LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP-PSVNRSLPSWNILISALGRHGYFE 631
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
E F MLE+GIKP H+T+V +LTAC+HGGLV++G YY+M+ ++P H +
Sbjct: 632 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICV 691
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
+DLLGR+G L EA FI MP++P+ + W SLL++C++H NLD G+ AAE L +EP++
Sbjct: 692 IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDD 751
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
Y N++++ G+WED N+RK M + +KK Q SWV++++KV FG+ D HPQ
Sbjct: 752 SVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTM 811
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
IY K+ I IKE G+V DT+ L D +E+ KE L +HSE+LA+A+ L+STPE +T+
Sbjct: 812 EIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTV 871
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
RI KNLR+C+DCHS KF+ +++ R IV+RD RFHHF++GL
Sbjct: 872 RIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGL 913
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 146/592 (24%), Positives = 279/592 (47%), Gaps = 94/592 (15%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKN-SLMNFYAKTESISYAK 68
+ +EF+ + +K + + LV A CG S+F + + F AK+ +S
Sbjct: 23 LEGMEFFRKMCDLGIKPSSFVIASLVTA----CGRSGSMFREGVQVHGFVAKSGLLS--- 75
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
++ V T IL Y G + + +VF MP+R+ VSWT+++V Y++ G +
Sbjct: 76 ----DVYVST-----AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
I ++ M + V + +++ V++SC L D S G+++ VVK+GL + V NSL++
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
M +G+ A +FD M ++ SW NS+
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISW-------------------------------NSI 215
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
A Y+QNG+ E+ +F+ +++ + + T+++ LS +++ K G+ IH +++
Sbjct: 216 AAAYAQNGHIEESFRIFS-LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
FD+ V N L+ YA G + VE A +
Sbjct: 275 FDSVVCVCNTLLRMYAGAG------RSVE---------------------------ANLV 301
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +D+++W +++ + +G + DA+ L SM+ G N T ++ L+ +
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ G+ +H + SG + + NAL++MY K G ++ +RRV L R++ V+W ++I
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL-LQMPRRDVVAWNALIGG 420
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIK 547
A+ ++A+ F+ M G+ ++IT V VL+AC G L+E+G+ + + V
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI--VSAGF 478
Query: 548 PTPSHFA-SMVDLLGRAGLL---QEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ H S++ + + G L Q+ +N ++N +++ W ++L+A H
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR----NIITWNAMLAANAHH 526
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/571 (23%), Positives = 245/571 (42%), Gaps = 130/571 (22%)
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
MPV+ SWNT++S + +G + + F
Sbjct: 1 MPVRNEVSWNTMMSGIVR-------------------------------VGLYLEGMEFF 29
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDL-SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
+M + P+ F + S++ +C G + G +VH FV K+GL V V+ ++L++Y
Sbjct: 30 RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV 89
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G ++ VF+ +M +R+VV+W S++ GY
Sbjct: 90 YGLVSCSRKVFE-------------------------------EMPDRNVVSWTSLMVGY 118
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
S G E + ++ M + + ++ +++ +S+C L+ LG+QI ++++ ++
Sbjct: 119 SDKGEPEEVIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V N+LIS +G V+ A IFD +
Sbjct: 178 LAVENSLISMLGSMGNVDYAN---------------------------------YIFDQM 204
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH-- 430
+RD ++W ++ Y QNG +++ +F M R + N+ T+S +LSV L +DH
Sbjct: 205 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV---LGHVDHQK 261
Query: 431 -GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G+ IH ++ G S + V N L+ MY+ AG A VF + ++ +SW S++ +
Sbjct: 262 WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASF 320
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-----------THGGLVEQGQRYYN 538
G +A+ L M+ G +++T+ L AC HG +V G Y
Sbjct: 321 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 380
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
++ N ++V + G+ G + E+ + MP DVVAW +L+ ++
Sbjct: 381 IIGN------------ALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDP 427
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
D +AA + + +E +S Y + ++ S+C
Sbjct: 428 D-KALAAFQTMRVEGVSSN-YITVVSVLSAC 456
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/534 (20%), Positives = 206/534 (38%), Gaps = 137/534 (25%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H ++K G V + N+L+ YA A VF +MP K L SWN++++++
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 92 QGR----LDLACEVFNLMPNRDSVSWTT-------------------------------- 115
GR L L C + + + + V++T+
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 116 ---IIVTYNEIGRFKNAIRMFVEMVQDQVLP----------------------------- 143
++ Y +IG + R+ ++M + V+
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 442
Query: 144 --TQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
TV SVL++C GD L GK +H+++V G +V NSL+ MYAK GD ++
Sbjct: 443 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 502
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+F+G+ +N+ +W N+M+A + +G+ E
Sbjct: 503 DLFNGLDNRNIITW-------------------------------NAMLAANAHHGHGEE 531
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
L + + M + + D+F+ + LSA A L L+ G+Q+H ++ F+
Sbjct: 532 VLKLVSKM-RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH--------- 581
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ F D Y K G+IG ++ +R + +W
Sbjct: 582 ------------------------DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 617
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
++ ++G ++ F M+ G KP + T ++L+ S +D G + R
Sbjct: 618 NILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 677
Query: 441 S-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
G ++ +I + ++G + A + + + + W S++ + HG
Sbjct: 678 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 731
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 265/737 (35%), Positives = 401/737 (54%), Gaps = 81/737 (10%)
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
L+ + S+ A+ +FD++P + + +L AYA+ RL A ++F +P +D VSW
Sbjct: 61 LLFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSW 120
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+II C GD+ +K+ + +
Sbjct: 121 NSII-----------------------------------KGCLHCGDIVTARKLFDEMPR 145
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL--KNVSSWNVVVSLHIHSGRLDLAR 231
+ + + LL ++G A+ +F M ++V++WN ++ + +GR+D A
Sbjct: 146 RTVVSWTTLVDGLL----RLGIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNGRVDDAL 201
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
F QM RDV++W+SMIAG NG +AL +F +M+ S + L LSA A +
Sbjct: 202 QLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVA-SGVCLSSGVLVCGLSAAAKI 260
Query: 292 EKLKLGKQIHAYIIRT---EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
++G QIH + + FD V +L++ YA +E
Sbjct: 261 PAWRVGIQIHCSVFKLGDWHFDEF--VSASLVTFYAGCKQME------------------ 300
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
A R+F + + VV WTA+L GY N +++A+E+F M+R
Sbjct: 301 ---------------AACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDV 345
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN + ++ L+ L ++ GK IHA+A++ G S V +L+ MYSK G ++ A
Sbjct: 346 VPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVY 405
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF I+ + VSW S+IV AQHG G A+ LF +ML G+ PD IT G+L+AC+H G
Sbjct: 406 VFKGIN-EKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSG 464
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
++++ + ++ + T H+ SMVD+LGR G L+EA + +MP++ + + W +L
Sbjct: 465 MLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLAL 524
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSACR H NLDL K AA ++ IEPD S AY L NLY+S +W + A IR+ MK+ GV
Sbjct: 525 LSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVV 584
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G SW+ ++ + H F D HP + IY K+ + ++KE+G+VPD LHDVE +
Sbjct: 585 KKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETE 644
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE+ML +HSE+LAIAFGL+ST E + + +MKNLRVC DCH+AIK + K+VDREIVVRD+
Sbjct: 645 QKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDS 704
Query: 769 TRFHHFKKGLCSCRDYW 785
+RFH FK G+CSC DYW
Sbjct: 705 SRFHDFKNGICSCGDYW 721
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 216/503 (42%), Gaps = 114/503 (22%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCS------------------------------ 81
NS++ I A+K+FDEMP +T+ S
Sbjct: 121 NSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRD 180
Query: 82 ---WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
WN ++ Y GR+D A ++F MP+RD +SW+++I + G+ + A+ +F +MV
Sbjct: 181 VAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVA 240
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V + + L++ + G ++H V K G + + DE +
Sbjct: 241 SGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLG------------DWHF---DEFV 285
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+ + +V+ + +++ A F +++ + VV W +++ GY N
Sbjct: 286 SAS---------------LVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKH 330
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
EAL +F M++ + P++ + S L++C LE ++ GK IHA ++ ++ G VG +
Sbjct: 331 REALEVFGEMMR-IDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGS 389
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+ Y+K G V A +F + +++VV
Sbjct: 390 LVVMYSKCGYVS---------------------------------DAVYVFKGINEKNVV 416
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W +++VG Q+G A+ LF M+REG P+ T++ +LS S L +
Sbjct: 417 SWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYF 476
Query: 439 LRSGEASSLSVS----NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
G+ S++++ +++ + + G + A V + + ++ W +++ A +H
Sbjct: 477 ---GQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSN 533
Query: 494 --LGEEAI-QLFERMLELGIKPD 513
L + A Q+FE I+PD
Sbjct: 534 LDLAKRAANQIFE------IEPD 550
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 140/339 (41%), Gaps = 66/339 (19%)
Query: 31 VGKLVHARIIKCG-LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
VG +H + K G H F+ SL+ FYA + + A +VF E+ K++ W +L+ Y
Sbjct: 265 VGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGY 324
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ + A+ +F EM++ V+P + + T
Sbjct: 325 GLN-------------------------------DKHREALEVFGEMMRIDVVPNESSFT 353
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S L SC L D+ GK +H+ VK GL V SL+ MY+K G A VF G+ K
Sbjct: 354 SALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEK 413
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
NV SW NS+I G +Q+G AL +F ML
Sbjct: 414 NVVSW-------------------------------NSVIVGCAQHGCGMWALALFNQML 442
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI-IRTEFDATGPVGNALISCYAKVGG 328
++ + PD T+ LSAC++ L+ + Y + T +++ + G
Sbjct: 443 RE-GVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGE 501
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+E A+ +V + N + + LL K ++ A+R
Sbjct: 502 LEEAEAVVMSMPMK-ANSMVWLALLSACRKHSNLDLAKR 539
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK++HA +K GL ++ SL+ Y+K +S A VF + K + SWN+++ A+
Sbjct: 368 GKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQ 427
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G C ++ A+ +F +M+++ V P TVT +
Sbjct: 428 HG-----CGMW--------------------------ALALFNQMLREGVDPDGITVTGL 456
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVT----NSLLNMYAKVGDEMMAKAVFDGMR 207
L++C+ G L +K F G V +T S++++ + G+ A+AV M
Sbjct: 457 LSACSHSGML---QKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMP 513
Query: 208 LK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+K N W ++S LDLA+ +Q+ E
Sbjct: 514 MKANSMVWLALLSACRKHSNLDLAKRAANQIFE 546
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 270/788 (34%), Positives = 421/788 (53%), Gaps = 91/788 (11%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM---- 105
L NSL+N YAKT A +F +MP K + SW+T+++ YA + A +F+ M
Sbjct: 208 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 267
Query: 106 --PN-----------------------------RDSVSWTTIIVTYNEIGRFKNAIRMFV 134
PN +D VSW ++ Y + G ++ +F
Sbjct: 268 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFR 327
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M+ D + P V +LA+ + LG +H +VV++G + V V SL+ +Y+K G
Sbjct: 328 NMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCG 387
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
++ D ++L F MI RDVV W+SMIA Y
Sbjct: 388 ------SLGDAVKL-------------------------FKGMIVRDVVIWSSMIAAYGI 416
Query: 255 NGYDFEALGMFANMLK---------DSSLKPD-KFTLASTLSACANLEKLKLGKQIHAYI 304
+G EAL +F M++ S++P + LA T A + ++ A+
Sbjct: 417 HGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLAT----HIPWKVKAFY 472
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R F G + ++++ + G+ Y + I T Y+ I
Sbjct: 473 MRAHFRWLGHFWEIFPT--YPFQAADMSKSNIFAYGLQYDSRI-LTKFAIMYVSFNRIDA 529
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN-------YTLSA 417
A +F+ + + W M+ G+ +G ++EL+ M+ +G KP+N ++ +
Sbjct: 530 ASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILS 589
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
+L +L +L G+ H+ +++G + V+ A++ MYSK G+++ AR +F+ +
Sbjct: 590 VLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK- 648
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+ V W++MI + HG G +AI LF++M++ G++P H+T+ VL+AC+H GL+E+G+ Y+
Sbjct: 649 DLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYF 708
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+M I S++A MVDLLGRAG L EA + IENMP+EPD WGSLL ACR+H N
Sbjct: 709 QLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN 768
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
LDL + A+ L ++P ++G + L N+Y++ +W + +RK M G K QGFS V+
Sbjct: 769 LDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVE 828
Query: 658 IQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHH 717
N+VH FGV D HPQ + +Y K+ ++ +K +G+VP T VLHD+EE+ KE L +H
Sbjct: 829 YDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYH 888
Query: 718 SEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
SE+LAIAFGLI+T TTLRI KNLR+C DCH+AIK I K+V+R I+VRD RFH F+ G
Sbjct: 889 SERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDG 948
Query: 778 LCSCRDYW 785
+CSC DYW
Sbjct: 949 VCSCGDYW 956
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 209/476 (43%), Gaps = 67/476 (14%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H+++ K G+ F L + YAK S+ A+KVFDE P + WN+ L +Y ++ +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ +F+LM I T E P FT+ L +
Sbjct: 83 WEETLRLFHLM-----------ICTAGEA-------------------PDNFTIPIALKA 112
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C L L GK +H F K ++G +M +
Sbjct: 113 CAGLRMLELGKVIHGFAKKND----------------EIGSDMFVGSA------------ 144
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+V L+ G++ A F++ D V W SM+ GY QN EAL +F+ M+
Sbjct: 145 --LVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCF 202
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
D + S L+ A K+ + + + + + + +I+CYA A
Sbjct: 203 DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISW----STMIACYANNEAANEALN 258
Query: 335 IVEQSGISYL--NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
+ + N + + L ++ ++I +DVV+W A+L GY QNG+
Sbjct: 259 LFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGM 318
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
++ +FR+M+ +G +P+ + +L+ SS L +H +RSG S++ V +
Sbjct: 319 AYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGAS 378
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
LI +YSK G++ A ++F + R + V W+SMI A HG G EA+++F++M+++
Sbjct: 379 LIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 179/414 (43%), Gaps = 77/414 (18%)
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
SL+ L AR FD+ +V WNS + Y + E L +F M+ + PD
Sbjct: 44 SLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDN 103
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNALISCYAKVGGVEIAQKIVE 337
FT+ L ACA L L+LGK IH + + E + VG+AL+ Y+K G + A K+ E
Sbjct: 104 FTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFE 163
Query: 338 Q-----------------------SGISYLNVIAFTTLLDG-----------YIKIGDIG 363
+ ++ + + DG Y K G
Sbjct: 164 EFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEK 223
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A +F + ++DV++W+ M+ Y N +A+ LF M+ + +PN+ T+ + L +
Sbjct: 224 IAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA 283
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+L+ GK+IH A+ W+ + VSW
Sbjct: 284 VSRNLEEGKKIHKIAV-----------------------------------WK-DVVSWV 307
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+++ AQ+G+ +++ +F ML GI+PD + V +L A + G+ +Q + V
Sbjct: 308 ALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY---V 364
Query: 544 HKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ + F AS+++L + G L +A + M + DVV W S+++A +H
Sbjct: 365 VRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIH 417
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 13/261 (4%)
Query: 349 FTTLLDG-YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV-RE 406
F T L+ Y K + AR++FD +V W + L Y + ++ + LF M+
Sbjct: 38 FATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTA 97
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINA 465
G P+N+T+ L + L L+ GK IH A ++ E S + V +AL+ +YSK G +
Sbjct: 98 GEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGE 157
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV-GVLTAC 524
A +VF R +TV WTSM+ Q+ EEA+ LF +M+ + + V +L
Sbjct: 158 ALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLY 216
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM---PLEPD 581
G + ++ M I +++M+ EA N M EP+
Sbjct: 217 AKTGCEKIAANLFSKMPEKDVIS-----WSTMIACYANNEAANEALNLFHEMIEKRFEPN 271
Query: 582 VVAWGSLLSACRVHKNLDLGK 602
V S L AC V +NL+ GK
Sbjct: 272 SVTVVSALQACAVSRNLEEGK 292
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 128/312 (41%), Gaps = 60/312 (19%)
Query: 29 PF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
PF + + I GL + Y I A VF+++P WN ++
Sbjct: 491 PFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 550
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+A GR + E+++ M + ++ V+P + +
Sbjct: 551 GFATDGRFLSSLELYSKMMEKG------------------------LKPDNSGVIPNRVS 586
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ SVL +C LG L G+ HS+V++TG + V ++++MY+K G +A+ +FD
Sbjct: 587 ILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETA 646
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K++ W ++MIA Y +G+ +A+ +F
Sbjct: 647 GKDLVCW-------------------------------SAMIASYGIHGHGRKAIDLFDQ 675
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCYAK 325
M+K + ++P T LSAC++ L+ GK ++ ++ EF + N ++ +
Sbjct: 676 MVK-AGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDLLGR 733
Query: 326 VGGVEIAQKIVE 337
G + A ++E
Sbjct: 734 AGQLSEAVDLIE 745
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 27/245 (11%)
Query: 9 LISPLEFYAHLLQSNLKSRNPFVGK---LVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
+S LE Y+ +++ LK N V + + ++ CG +L K + Y
Sbjct: 558 FLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACG-NLGALRKGEWFHSYVIQTGFE 616
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+ ++ V T I+ Y+K G LDLA +F+ +D V W+ +I +Y G
Sbjct: 617 F------DILVAT-----AIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 665
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK-----KVHSFVVKTGLSGCV 180
+ AI +F +MV+ V P+ T T VL++C+ G L GK FV+ LS
Sbjct: 666 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSN-- 723
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVV-SLHIHSGRLDLARAQFDQMI 238
++++ + G A + + M ++ + S W ++ + IH+ LDLA D +
Sbjct: 724 --YACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHN-NLDLAEKIADHLF 780
Query: 239 ERDVV 243
D V
Sbjct: 781 HLDPV 785
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 5/213 (2%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
Q+H+ ++G + L ++Y+K ++ AAR+VF+ W S + + +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP-HPNVHLWNSTLRSYCRE 80
Query: 493 GLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
EE ++LF M+ G PD+ T L AC ++E G+ + K +I
Sbjct: 81 KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
+++V+L + G + EA E PD V W S+++ + + + + +++++
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 612 E--PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+ + ++L NLY+ G + AAN+ M
Sbjct: 200 DCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKM 232
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 268/785 (34%), Positives = 408/785 (51%), Gaps = 117/785 (14%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+SP Y L ++ K ++ F G+L H ++ + + FL+NS++ Y K S++ A+K
Sbjct: 8 VSPRS-YKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARK 66
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFDEM + L SWNTI+SAYA+ G D
Sbjct: 67 VFDEMRERNLVSWNTIISAYAENGVFD-------------------------------KG 95
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
MF M++ + P T L S L GK++HS +++GL +V ++ NM
Sbjct: 96 FCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNM 155
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K G A+ VF+ M KN V W ++
Sbjct: 156 YVKCGWLEGAELVFEKMSEKN-------------------------------AVAWTGIM 184
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GY+Q +AL +FA M+ + ++ D++ + L ACA LE+L G+QIH +I++
Sbjct: 185 VGYTQAERQMDALALFAKMVNE-GVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL 243
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
++ VG L+ Y K +E A K E IS N ++++ L+ GY ++G+ A + F
Sbjct: 244 ESEVSVGTPLVDFYVKCSNLESATKAFEW--ISEPNDVSWSALITGYCQMGEFEEALKTF 301
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+SLR R V N++T +++ S+LA +
Sbjct: 302 ESLRTRSV-------------------------------DINSFTYTSIFQACSALADFN 330
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G Q HA A++S + +A+ITMYS+ G ++ A RVF I + V+WT++I
Sbjct: 331 SGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAGY 389
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
A G EA++LF RM + G++P+ +T++ VLTAC+H GLV +G++Y M + + + T
Sbjct: 390 AYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATT 449
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H+ MVD+ RAG LQEA I +MP PD ++W LL C ++NL++G++AAE L
Sbjct: 450 IDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLF 509
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
++P+++ Y + NLY+S GKW++AAN+RK M ++K SW+ ++ KVH F V D
Sbjct: 510 QLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGD 569
Query: 670 WLHPQRDAIYNKMAKIWDEI--KEMGFVPDTASVLHDVEEDV-------KEQMLRHHSEK 720
HPQ + IY+K+ + D + +E G + EEDV KEQ+L HSE+
Sbjct: 570 KHHPQTEEIYSKLEALNDSVIKEETGLL---------TEEDVSNSLPERKEQLLV-HSER 619
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+AFGLISTP + + + KNLR C DCH K + + REIVVRD+ RFHHFK G CS
Sbjct: 620 LALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECS 679
Query: 781 CRDYW 785
C DYW
Sbjct: 680 CNDYW 684
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 173/410 (42%), Gaps = 72/410 (17%)
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++D+ + + AC ++ L G+ H + RT + + N+++ Y K G
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ A+K +FD +R+R++V+W ++ Y
Sbjct: 61 LADARK---------------------------------VFDEMRERNLVSWNTIISAYA 87
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+NG+ +F +M+ KPN T L + + L+ GKQIH+ A+RSG S+ S
Sbjct: 88 ENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNAS 147
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V+ A+ MY K G + A VF + + V+WT ++V Q +A+ LF +M+
Sbjct: 148 VNTAISNMYVKCGWLEGAELVFEKMS-EKNAVAWTGIMVGYTQAERQMDALALFAKMVNE 206
Query: 509 GIKPDHITYVGVLTACT-----------HGGLVEQGQR-----------YYNMMKNVHKI 546
G++ D + VL AC HG +V+ G +Y N+
Sbjct: 207 GVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESA 266
Query: 547 --------KPTPSHFASMVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVH 595
+P +++++ + G +EA E++ ++ + + S+ AC
Sbjct: 267 TKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSAL 326
Query: 596 KNLDLGKIA---AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+ + G A A K L+ + SA+ +YS CG+ + A + +S+
Sbjct: 327 ADFNSGAQAHADAIKSSLVAYQH--GESAMITMYSRCGRLDYATRVFESI 374
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 274/758 (36%), Positives = 396/758 (52%), Gaps = 104/758 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H +I++ G VF+ +L+N Y K S+ A W++
Sbjct: 125 GMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGA--------------WDS------- 163
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
F + +RD VSWT +I + +F A ++ M D V+P + T+ +V
Sbjct: 164 ----------FKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTV 213
Query: 152 LASCTALGD---LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
A GD LS GK ++S V + V V NS +NM+
Sbjct: 214 F---NAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFG----------------- 253
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++G L AR F+ M++RDVVTWN +I Y QN EA+ +F +
Sbjct: 254 --------------NAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+D +K + T L+ +L L GK IH + +D V AL+S Y +
Sbjct: 300 QQDG-IKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
G A +IF + +DV+ WT M V Y
Sbjct: 359 P---------------------------------GQAWKIFVDMGSKDVITWTVMCVAYA 385
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QNG K+A++LF+ M EG +P + TL A+L + LA+L G+QIH+ + +G +
Sbjct: 386 QNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMV 445
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V ALI MY K G + AR VF + +++ + W SM+ A AQHG +E +QLF +M
Sbjct: 446 VETALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFNQMQLD 504
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G K D +++V VL+A +H G V G +Y+ M I PTP + +VDLLGRAG +QE
Sbjct: 505 GEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQE 564
Query: 569 AYNFIENMP-LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
A + + + PD + W +LL ACR H D K AAE++L +P +SGAY L N+Y+
Sbjct: 565 AVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYA 624
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G W+ +RK M+ GVKK G S ++I N+VH F D HP+R IY ++ +
Sbjct: 625 AAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNS 684
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E++ G++PDT +LHDVE++ KE ML +HSE+LAIAFGL+STP T LR++KNLRVC+D
Sbjct: 685 EMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSD 744
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+A K+I KL REI+VRD RFH+FK G CSC+DYW
Sbjct: 745 CHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 224/528 (42%), Gaps = 109/528 (20%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++L C++ ++ G++VH V G V L+ MYA+ G A+ V
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ + K+V +W ++ ++ G D A F QM E DV+
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVM------------------- 103
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
P K T + L+ACA+ E LK G +IH I++ F+ VG ALI+
Sbjct: 104 -------------PTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINM 150
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR--------- 373
Y K G V A ++ + + +V+++T ++ ++ AR ++ ++
Sbjct: 151 YNKCGSVRGAWDSFKR--LEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKI 208
Query: 374 ------------------------------DRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+ DV + + + GL DA LF M
Sbjct: 209 TLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDM 268
Query: 404 V-------------------------------REGPKPNNYTLSAMLSVSSSLASLDHGK 432
V ++G K N+ T ML+V +SL SL GK
Sbjct: 269 VDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGK 328
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IH +G + V+ AL+++Y + A ++F + ++ ++WT M VA AQ+
Sbjct: 329 VIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIF-VDMGSKDVITWTVMCVAYAQN 387
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPS 551
G +EA+QLF+ M G +P T V VL C H +++G++ + ++++N +++
Sbjct: 388 GFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE 447
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+++++ G+ G + EA + E M + D++ W S+L A H D
Sbjct: 448 --TALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYD 492
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 142/317 (44%), Gaps = 36/317 (11%)
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
KPD + L C++ + + G+++H ++ F+ V LI YA+ G V AQ
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ +F+ L +DV AWT M+ Y Q G
Sbjct: 61 Q---------------------------------VFEILERKDVFAWTRMIGIYCQQGDY 87
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
A+ +F M E P T A+L+ +S SL G +IH L+ G + V AL
Sbjct: 88 DRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTAL 147
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K G++ A F + R + VSWT+MI A QH A L+ RM G+ P+
Sbjct: 148 INMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPN 206
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
IT V A + +G+ Y+++ + ++ S +++ G AGLL +A
Sbjct: 207 KITLYTVFNAYGDPHYLSEGKFIYSLVSS-RVMESDVRVMNSAMNMFGNAGLLGDARRLF 265
Query: 574 ENMPLEPDVVAWGSLLS 590
E+M ++ DVV W +++
Sbjct: 266 EDM-VDRDVVTWNIVIT 281
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
KP+ A+L SS ++DHG+++H G + V LI MY++ G++ A++
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT--- 525
VF ++ R++ +WT MI Q G + A+ +F +M E + P +TYV +L AC
Sbjct: 62 VFEILE-RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 526 --------HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
HG +++QG + +++++ + G ++ A++ + +
Sbjct: 121 SLKDGMEIHGQILQQG------------FEGDVFVGTALINMYNKCGSVRGAWDSFKRLE 168
Query: 578 LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
DVV+W ++++AC H L + ++ L
Sbjct: 169 -HRDVVSWTAMIAACVQHDQFALARWLYRRMQL 200
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 4 PNPPSLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
P +L++ L+ AHL LQ G+ +H+ II+ G + + ++ +L+N Y K
Sbjct: 407 PTSATLVAVLDTCAHLAALQK---------GRQIHSHIIENGFRMEMVVETALINMYGKC 457
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM----PNRDSVSWTTII 117
++ A+ VF++M + + WN++L AYA+ G D ++FN M D+VS+ +++
Sbjct: 458 GKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVL 517
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ G + + FV M+QD T T L C AG+ + + LS
Sbjct: 518 SALSHSGSVTDGYQYFVAMLQD----FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLS 573
Query: 178 GCV 180
GC+
Sbjct: 574 GCL 576
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 270/790 (34%), Positives = 416/790 (52%), Gaps = 109/790 (13%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYA 59
M P PP+L+ L+S + SR+ +G+ VHA I++ L FL N L+N Y+
Sbjct: 1 MNVPRPPNLL------GSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYS 54
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
K + + A+ V +L R V+WT++I
Sbjct: 55 KLDLPNSAQLVL-------------------------------SLTNPRTVVTWTSLISG 83
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
RF +A+ F M ++ VLP FT V + +L GK++H+ +K G
Sbjct: 84 CVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILD 143
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V V S +MY+K G +R + AR FD+M
Sbjct: 144 VFVGCSAFDMYSKTG-----------LRPE--------------------ARNMFDEMPH 172
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
R++ TWN+ ++ Q+G +A+ F L +P+ T + L+ACA++ L+LG+Q
Sbjct: 173 RNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDG-EPNAITFCAFLNACADIVSLELGRQ 231
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H +I+R+ + +V F L+D Y K
Sbjct: 232 LHGFIVRSRYRE---------------------------------DVSVFNGLIDFYGKC 258
Query: 360 GDIGPARRIFDSLRD--RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
GDI + +F + R+VV+W ++L QN + A +F R+ +P ++ +S+
Sbjct: 259 GDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISS 317
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
+LS + L L+ G+ +HA AL++ ++ V +AL+ +Y K G+I A +VF + R
Sbjct: 318 VLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERN 377
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITYVGVLTACTHGGLVEQGQR 535
V+W +MI A G + A+ LF+ M GI ++T V VL+AC+ G VE+G +
Sbjct: 378 -LVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQ 436
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ M+ + I+P H+A +VDLLGR+GL+ AY FI+ MP+ P + WG+LL AC++H
Sbjct: 437 IFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMH 496
Query: 596 KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
LGKIAAEKL ++PD+SG + N+ +S G+WE+A +RK M+ +G+KK G+SW
Sbjct: 497 GKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSW 556
Query: 656 VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR 715
V ++N+VHVF +D H + I +AK+ E+K+ G+VPD L D+EE+ K +
Sbjct: 557 VAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVW 616
Query: 716 HHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFK 775
+HSEK+A+AFGLI+ P +RI KNLR+C DCHSAIKFI K+V REI+VRD RFH FK
Sbjct: 617 YHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFK 676
Query: 776 KGLCSCRDYW 785
G CSC+DYW
Sbjct: 677 DGWCSCKDYW 686
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/671 (36%), Positives = 387/671 (57%), Gaps = 53/671 (7%)
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y E G K R+F + + +V TQF + +SC + K ++ V
Sbjct: 16 YREKGEGK---RIF-QFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFNATHV------- 64
Query: 180 VNVTNSLLNMYAK-----VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+ + +L + AK G A+ + G++ ++S N++++++ G +D AR F
Sbjct: 65 -SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTS-NILINMYSKCGSVDFARQVF 122
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D+M R +V+WN+MI +QNG + EAL + M ++ + +FT++S L ACA L
Sbjct: 123 DEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGT-PFSEFTISSVLCACAAKCAL 181
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
+ +HA+ I+ D LNV T LLD
Sbjct: 182 SECQLLHAFAIKAAMD---------------------------------LNVFVATALLD 208
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
Y K G + A +F+S+ DR VV W++M GY QN + + A+ LFR G K + +
Sbjct: 209 VYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFL 268
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+S+++ + LA++ GKQ++A +SG S++ V+++LI MY+K G I + +VF +
Sbjct: 269 MSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R V W +MI L++H E + LFE+M ++G+ P+ +T+V VL+AC H GLV++GQ
Sbjct: 329 KRN-VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQ 387
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+Y+++M H + P H++ MVD L RAG + EAY+ I +P WGSLL++CR
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H NL+L ++AA+KL IEP NSG Y L N+Y++ GKW++ A +RK +K VKK +G S
Sbjct: 448 HGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKS 507
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQML 714
W++I++KVH+F V + HP+ IY+K+ ++ DE++++G+ +T LH V E +K+++L
Sbjct: 508 WIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELL 567
Query: 715 RHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
RHHSEKLA GL+ P N +RIMKNLR+C DCHS +K K R+++VRD RFHHF
Sbjct: 568 RHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHF 627
Query: 775 KKGLCSCRDYW 785
K G CSC D+W
Sbjct: 628 KNGCCSCGDFW 638
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 217/482 (45%), Gaps = 97/482 (20%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
+ F +L+ K + GK HA+I+ GL + N L+N Y+K S+ +A++VFD
Sbjct: 64 VSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFD 123
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
EMP ++L SWNT++ + + G NE A+ +
Sbjct: 124 EMPSRSLVSWNTMIGSLTQNGE-------------------------ENE------ALDL 152
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
++M ++ ++FT++SVL +C A LS + +H+F +K + V V +LL++YAK
Sbjct: 153 LLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAK 212
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G +M AV F+ M +R VVTW+SM AGY
Sbjct: 213 CG--LMKDAV-----------------------------CVFESMPDRSVVTWSSMAAGY 241
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
QN +AL +F ++ LK D+F ++S + ACA L + GKQ++A + ++ F +
Sbjct: 242 VQNEMYEQALALFRKAW-ETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSN 300
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V ++LI YAK GG+E + ++F +
Sbjct: 301 IFVASSLIDMYAKCGGIE---------------------------------ESYKVFRDV 327
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
R+VV W AM+ G ++ + + + LF M + G PN+ T ++LS + + G+
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQ 387
Query: 433 QIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ + A ++ + ++ S+AG I A + + + + W S++ +
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 492 HG 493
HG
Sbjct: 448 HG 449
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 49/258 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK V+A + K G ++F+ +SL++ YAK I + KVF ++ + + WN ++S ++
Sbjct: 285 GKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSR 344
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R S +I +F +M Q + P T SV
Sbjct: 345 HAR-----------------SLEVMI--------------LFEKMQQMGLSPNDVTFVSV 373
Query: 152 LASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGD-----EMMAKAVFDG 205
L++C +G + G+K + K L+ V + +++ ++ G ++++K F+
Sbjct: 374 LSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS-----MIAGYSQNGYDFE 260
+ S W +++ G L+LA ++ D+ NS + Y+ NG ++
Sbjct: 434 ----SASMWGSLLASCRTHGNLELAEVAAKKLF--DIEPHNSGNYLLLSNMYAANG-KWD 486
Query: 261 ALGMFANMLKDSSLKPDK 278
+ +LK+S +K ++
Sbjct: 487 EVAKMRKLLKESDVKKER 504
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/764 (34%), Positives = 397/764 (51%), Gaps = 108/764 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H ++ L + + N+L+N Y K S+S+AK+V +AK
Sbjct: 77 GIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRV------------------FAK 118
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R R+ +SW+ + + G A+R F M+ + T+ + ++
Sbjct: 119 MER------------TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTI 166
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C++ + G+ +HS + +G + V N+++ MY + G
Sbjct: 167 LSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGA---------------- 210
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIE--RDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ AR FD M E RDVV+WN M++ Y N +A+ ++ M
Sbjct: 211 ---------------VEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM- 254
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
L+PDK T S LSAC++ E + LG+ +H I+ E + VGNAL+S YA
Sbjct: 255 ---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA----- 306
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
K G AR +FD + R +++WT ++ Y +
Sbjct: 307 ----------------------------KCGSHTEARAVFDKMEQRSIISWTTIISAYVR 338
Query: 390 NGLNKDAVELFRSMVR-------EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
L +A LF+ M+ + KP+ +L+ + +++L+ GK + A G
Sbjct: 339 RRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCG 398
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+S +V A++ +Y K G I ARR+F+ + R + W +MI AQ G EA++LF
Sbjct: 399 LSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLF 458
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK-IKPTPSHFASMVDLLG 561
RM G++PD ++V +L AC+H GL +QG+ Y+ M ++ + T HF + DLLG
Sbjct: 459 WRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLG 518
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L+EA F+E +P++PD VAW SLL+ACR H++L K A KLL +EP + Y A
Sbjct: 519 RGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVA 578
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ KW A +RK M GVKK +G S ++I +H F D HP+ I +
Sbjct: 579 LSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREE 638
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+AK+ ++KE G+VPDT VLH V+E KE++L HSE+LAIA GLISTP T LR+ KN
Sbjct: 639 LAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKN 698
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC+DCH+A K I K+ R+IVVRD TRFH FK G CSC+DYW
Sbjct: 699 LRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 208/452 (46%), Gaps = 80/452 (17%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
A+A FD + +R++ +W ++A ++ +G E L M +D ++PD T + L +C
Sbjct: 11 AKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDG-VRPDAVTFITALGSCG 69
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ E L+ G +IH ++ + + V NAL++ Y K G
Sbjct: 70 DPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGS--------------------- 108
Query: 350 TTLLDGYIKIGDIGPARRIFDSL-RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
+ A+R+F + R R+V++W+ M + +G +A+ FR M+ G
Sbjct: 109 ------------LSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGI 156
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
K + +LS SS A + G+ IH+ SG S L V+NA++TMY + G + AR+
Sbjct: 157 KATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARK 216
Query: 469 VFNLI-HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
VF+ + ++ VSW M+ + G++AIQL++RM ++PD +TYV +L+AC+
Sbjct: 217 VFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSA 273
Query: 528 GLVEQGQRYYNMMKN-------------VHKIKPTPSH-----------------FASMV 557
V G+ + + N V SH + +++
Sbjct: 274 EDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTII 333
Query: 558 DLLGRAGLLQEAYNFIENM----------PLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
R L+ EA + + M ++PD +A+ ++L+AC L+ GK+ +E+
Sbjct: 334 SAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ 393
Query: 608 LLLIEPDNSGAY-SALCNLYSSCGKWEDAANI 638
+ A +A+ NLY CG+ E+A I
Sbjct: 394 AASCGLSSDKAVGTAVVNLYGKCGEIEEARRI 425
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 46/340 (13%)
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y G A+ FD+L R++ +WT ++ + +G +K+ + M ++G +P+ T
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
L SL G +IH + S VSNAL+ MY K G+++ A+RVF +
Sbjct: 62 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 121
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ +SW+ M A A HG EA++ F ML LGIK V +L+AC+ LV+ G+
Sbjct: 122 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR- 180
Query: 536 YYNMMKNVHKIKPTPSHFA---SMVDLLGRAGLLQEA----------------YNFI--- 573
M+ + + S +++ + GR G ++EA +N +
Sbjct: 181 ---MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237
Query: 574 --------------ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGA 618
+ M L PD V + SLLSAC +++ LG++ ++++ E + N
Sbjct: 238 YVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+AL ++Y+ CG +A + M+ + SW I
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSI-----ISWTTI 332
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 157/361 (43%), Gaps = 62/361 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL + + + +G+++H +I+ L +V + N+L++ YAK S + A+ VFD+M
Sbjct: 263 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 322
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+++ SW TI+SAY ++ + AC +F M + KN
Sbjct: 323 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELE-----------------KNG------ 359
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+V P ++L +C + L GK V GLS V +++N+Y K G+
Sbjct: 360 -SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 418
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD + + DV WN+MIA Y+Q
Sbjct: 419 IEEARRIFDAVCSRP------------------------------DVQLWNAMIAVYAQF 448
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EAL +F M + ++PD F+ S L AC++ GK + + T +
Sbjct: 449 GQSHEALKLFWRMEME-GVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTI 507
Query: 316 GNALISCYAKV----GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
+ C A + G ++ A++ +E+ + + +A+T+LL D+ A+ + +
Sbjct: 508 QH--FGCVADLLGRGGRLKEAEEFLEKLPVKP-DAVAWTSLLAACRNHRDLKRAKEVANK 564
Query: 372 L 372
L
Sbjct: 565 L 565
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/671 (36%), Positives = 387/671 (57%), Gaps = 53/671 (7%)
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y E G+ K R+F + + +V TQF + +SC + K ++ V
Sbjct: 16 YREKGKGK---RIF-QFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFNATHV------- 64
Query: 180 VNVTNSLLNMYAK-----VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+ + +L + AK G A+ + G++ ++S N++++++ G +D AR F
Sbjct: 65 -SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTS-NILINMYSKCGSVDFARQVF 122
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D+M R +V+WN+MI +QNG + EAL + M ++ + +FT++S L ACA L
Sbjct: 123 DEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGT-PFSEFTISSVLCACAAKCAL 181
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
+ +HA+ I+ D LNV T LLD
Sbjct: 182 SECQLLHAFAIKAAMD---------------------------------LNVFVATALLD 208
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
Y K G + A +F+S+ DR VV W++M GY QN + + A+ LFR G K + +
Sbjct: 209 VYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFL 268
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+S+++ + LA++ GKQ++A +SG S++ V+++LI MY+K G I + +VF +
Sbjct: 269 MSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R V W +MI L++H E + LFE+M ++G+ P+ +T+V VL+AC H GLV +GQ
Sbjct: 329 KRN-VVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQ 387
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+Y+++M H + P H++ MVD L RAG + EAY+ I +P WGSLL++CR
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H NL+L ++AA+KL IEP NSG Y L N+Y++ GKW++ A +RK +K VKK +G S
Sbjct: 448 HGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKS 507
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQML 714
W++I++KVH+F V + HP+ IY+K+ ++ DE++++G+ +T LH V E +K+++L
Sbjct: 508 WIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELL 567
Query: 715 RHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
RHHSEKLA GL+ P N +RIMKNLR+C DCHS +K K R+++VRD RFHHF
Sbjct: 568 RHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHF 627
Query: 775 KKGLCSCRDYW 785
K G CSC D+W
Sbjct: 628 KNGCCSCGDFW 638
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 217/482 (45%), Gaps = 97/482 (20%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
+ F +L+ K + GK HA+I+ GL + N L+N Y+K S+ +A++VFD
Sbjct: 64 VSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFD 123
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
EMP ++L SWNT++ + + G NE A+ +
Sbjct: 124 EMPSRSLVSWNTMIGSLTQNGE-------------------------ENE------ALDL 152
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
++M ++ ++FT++SVL +C A LS + +H+F +K + V V +LL++YAK
Sbjct: 153 LLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAK 212
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G +M AV F+ M +R VVTW+SM AGY
Sbjct: 213 CG--LMKDAV-----------------------------CVFESMPDRSVVTWSSMAAGY 241
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
QN +AL +F ++ LK D+F ++S + ACA L + GKQ++A + ++ F +
Sbjct: 242 VQNEMYEQALALFRKAW-ETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSN 300
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V ++LI YAK GG+E + ++F +
Sbjct: 301 IFVASSLIDMYAKCGGIE---------------------------------ESYKVFRDV 327
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
R+VV W AM+ G ++ + + + LF M + G PN+ T ++LS + + G+
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQ 387
Query: 433 QIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ + A ++ + ++ S+AG I A + + + + W S++ +
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 492 HG 493
HG
Sbjct: 448 HG 449
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 177/395 (44%), Gaps = 70/395 (17%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+L+HA IK + L+VF+ +L++ YAK + A VF+ MP +++ +W+++ + Y +
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ- 243
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
NE+ ++ A+ +F + + + QF ++SV+
Sbjct: 244 ----------------------------NEM--YEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C L + GK++++ + K+G + V +SL++MYAK G + VF + +NV
Sbjct: 274 CACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVV 333
Query: 213 SWNVVV---SLHIHSGRLDLARAQFDQM-IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
WN ++ S H S + + + QM + + VT+ S+++ G + F M
Sbjct: 334 LWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLM 393
Query: 269 LKDSSLKPDKF---TLASTLSACANLEKLKLGKQIHAY--IIRTEFDATGPVGNALISCY 323
K+ L P+ F + TLS + G+ AY I + F+A+ + +L++
Sbjct: 394 TKEHHLAPNVFHYSCMVDTLS--------RAGQIFEAYDLISKLPFNASASMWGSLLASC 445
Query: 324 AKVGGVEIAQ----KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV-- 377
G +E+A+ K+ + + N + + + K ++ R++ L++ DV
Sbjct: 446 RTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKL---LKESDVKK 502
Query: 378 ---VAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
+W + KD V LF R PK
Sbjct: 503 ERGKSWIEI----------KDKVHLFMVGERNHPK 527
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 49/258 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK ++A + K G ++F+ +SL++ YAK I + KVF ++ + + WN ++S ++
Sbjct: 285 GKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSR 344
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R S +I +F +M Q + P T SV
Sbjct: 345 HAR-----------------SLEVMI--------------LFEKMQQMGLSPNDVTFVSV 373
Query: 152 LASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGD-----EMMAKAVFDG 205
L++C +G + G+K + K L+ V + +++ ++ G ++++K F+
Sbjct: 374 LSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS-----MIAGYSQNGYDFE 260
+ S W +++ G L+LA ++ D+ NS + Y+ NG ++
Sbjct: 434 ----SASMWGSLLASCRTHGNLELAEVAAKKLF--DIEPHNSGNYLLLSNMYAANG-KWD 486
Query: 261 ALGMFANMLKDSSLKPDK 278
+ +LK+S +K ++
Sbjct: 487 EVAKMRKLLKESDVKKER 504
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 267/780 (34%), Positives = 402/780 (51%), Gaps = 131/780 (16%)
Query: 42 CGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEV 101
CG S N +++ +K + A+K+FD MP + CSWNT++ AYA GRL+ A ++
Sbjct: 35 CGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKL 94
Query: 102 FNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL 161
F P R ++W+++I Y G A+ +F EM + P QFT SVL C+ L
Sbjct: 95 FYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLL 154
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
GK++H+ +KT V L++MYAK + A+ +F+
Sbjct: 155 EKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE----------------- 197
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
LA + R+ V W +M+ GYSQNG +A+ F +M + ++ ++FT
Sbjct: 198 -------LAPDK------RNHVLWTAMVTGYSQNGDGHKAIECFRDM-RGEGIECNQFTF 243
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
S L+AC ++ G Q+H I+R+ F A VG+AL+
Sbjct: 244 PSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALV--------------------- 282
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
D Y K GD+ ARR+ +++ D V+W +M+VG + GL ++A+ LFR
Sbjct: 283 ------------DMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFR 330
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M K + +T ++ V+NAL+ MY+K G
Sbjct: 331 IMHLRHMKIDEFTYPSL------------------------------VNNALVDMYAKRG 360
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
+ A VF + ++ +SWTS++ +G EEA++LF M +GI PD I VL
Sbjct: 361 YFDYAFDVFEKMT-DKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVL 419
Query: 522 TACTHG--------GLVE----------------------------QGQRYYNMMKNVHK 545
+A + G +E +G+ Y+ M+ V+
Sbjct: 420 SALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYG 479
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
IKP P H+A M+DLLGR+G L EA + M ++PD W +LL+ACRVH N++LG+ AA
Sbjct: 480 IKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAA 539
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
L +EP N+ Y L NLYS+ GKWE+AA R+ MK GV K G SW+++ +KVH F
Sbjct: 540 NNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRF 599
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
ED HP+ IY+K+ +I IKE G+VPD LHD++E+ KE L +HSEKLA+AF
Sbjct: 600 MSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAF 659
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GL++ P +RI KNLR+C DCH+A+K++ + R +++RD+ FHHF++G CSC DYW
Sbjct: 660 GLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 200/427 (46%), Gaps = 48/427 (11%)
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C LE +L I ++ + N ++S +K G V+ A+K+ + + +
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDV--MPDRDEC 73
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++ T++ Y G + AR++F R + W++++ GY + G + +A+ELF M EG
Sbjct: 74 SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEG 133
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
+PN +T ++L V S L+ GKQIHA A+++ S+ V L+ MY+K I A
Sbjct: 134 ERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC--- 524
+F L ++ V WT+M+ +Q+G G +AI+ F M GI+ + T+ +LTAC
Sbjct: 194 YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253
Query: 525 --------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
HG +V G NV +++VD+ + G L A +E M
Sbjct: 254 SACGFGAQVHGCIVRSG-----FGANVFV-------GSALVDMYSKCGDLSNARRMLETM 301
Query: 577 PLEPDVVAWGSLLSACRVH----KNLDLGKIAAEKLLLIEPDN--SGAYSALCNLYSSCG 630
++ D V+W S++ C + L L +I + + I+ S +AL ++Y+ G
Sbjct: 302 EVD-DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRG 360
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
++ A ++ + M V SW + V +H + Y + +++ E++
Sbjct: 361 YFDYAFDVFEKMTDKDV-----ISWTSL--------VTGCVH---NGSYEEALRLFCEMR 404
Query: 691 EMGFVPD 697
MG PD
Sbjct: 405 IMGIHPD 411
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/555 (21%), Positives = 211/555 (38%), Gaps = 179/555 (32%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA IK + F+ L++ YAK + I A+ +F+ P K
Sbjct: 157 GKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDK-------------- 202
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R+ V WT ++ Y++ G AI F +M + + QFT S+
Sbjct: 203 ----------------RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C ++ G +VH +V++G V V ++L++MY+K GD A+ + + M + +
Sbjct: 247 LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP 306
Query: 212 SSW----------------------------------------NVVVSLHIHSGRLDLAR 231
SW N +V ++ G D A
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAF 366
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
F++M ++DV++W S++ G NG EAL +F M + + PD+ +A+ LSA
Sbjct: 367 DVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM-RIMGIHPDQIVIAAVLSA---- 421
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
+ N+L+S YAK G +E A K+ +
Sbjct: 422 -----------------------LDNSLVSMYAKCGCIEDANKVFDS------------- 445
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
++I D+ + WTA++VGY QNG +D + + P P
Sbjct: 446 -----MEIQDV---------------ITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPE 485
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+Y +I + ++G + A+ + N
Sbjct: 486 HYA-------------------------------------CMIDLLGRSGKLMEAKELLN 508
Query: 472 LIHWRQETVSWTSMIVALAQHG---LGEEAI-QLFERMLELGIKPDH-ITYVGVLTACTH 526
+ + + W +++ A HG LGE A LFE ++P + + YV + +
Sbjct: 509 QMAVQPDATVWKALLAACRVHGNVELGERAANNLFE------LEPKNAVPYVLLSNLYSA 562
Query: 527 GGLVEQGQRYYNMMK 541
G E+ + +MK
Sbjct: 563 AGKWEEAAKTRRLMK 577
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/639 (39%), Positives = 386/639 (60%), Gaps = 48/639 (7%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM-AKAVFDGMR 207
T+ +A+ GDL+ ++ +FV + N LL YA+ + A+ +FD +
Sbjct: 21 TAAVAAAVRHGDLAGAEE--AFVSTPRKT--TATYNCLLAGYARAPGRLADARHLFDRIP 76
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+V S+N ++ H SG D AR F M RDV +WN+M++G S++G EA +F
Sbjct: 77 TPDVVSYNTLLLCHFASGDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLA 136
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +S+ NA++S +A G
Sbjct: 137 MPVRNSVS----------------------------------------WNAMVSGFACSG 156
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A++ ++ + + +T ++ GY+ IG++ A + F+++ R++V+W A++ GY
Sbjct: 157 DMSTAEEWF-RNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGY 215
Query: 388 EQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+N DA+ LFR+MVRE +PN TLS++L S+L++L GKQIH ++ + +
Sbjct: 216 VKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRN 275
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L+V +L++MY K G++++A +F +H R + V+W +MI AQHG G+EAI LFERM
Sbjct: 276 LTVGTSLVSMYCKCGDLSSACILFGEMHTR-DVVAWNAMISGYAQHGDGKEAINLFERMK 334
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G++P+ IT+V VLTAC H GL + G + + M+ ++ I+P H++ MVDLL RAG L
Sbjct: 335 DEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKL 394
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+ A +FI +MP EP A+G+LL+ACRV+KNL+ ++AA KL+ +P ++GAY L N+Y
Sbjct: 395 ERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIY 454
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ +W+D + +R+ MK V KT G+SW++I+ +H F D LHPQ I+ K+ ++
Sbjct: 455 AVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLGQLA 514
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+ +KEMG+VPD VLHDV+E +K QML HSEKLAIAFGLIST TLRI KNLRVC
Sbjct: 515 ERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLRVCG 574
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A K I + DREI++RD TRFHHF+ G CSC DYW
Sbjct: 575 DCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 175/384 (45%), Gaps = 74/384 (19%)
Query: 52 NSLMNFYAKTES-ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N L+ YA+ ++ A+ +FD +P + S+NT+L + G D A +F MP RD
Sbjct: 52 NCLLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPVRDV 111
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
SW T++ ++ G + A +F+ M P + +V+
Sbjct: 112 ASWNTMVSGLSKSGAVEEAKVVFLAM------PVRNSVS--------------------- 144
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF-DGMRLKNVSSWNVVVSLHIHSGRLDL 229
N++++ +A GD A+ F + ++ W +VS ++ G +
Sbjct: 145 ------------WNAMVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVK 192
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
A F+ M R++V+WN+++AGY +N + +AL +F M+++++++P+ TL+S L C+
Sbjct: 193 AIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCS 252
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
NL L GKQIH + ++ VG +L+S Y K
Sbjct: 253 NLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKC----------------------- 289
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
GD+ A +F + RDVVAW AM+ GY Q+G K+A+ LF M EG +
Sbjct: 290 ----------GDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVE 339
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQ 433
PN T +L+ D G Q
Sbjct: 340 PNWITFVVVLTACIHTGLCDFGIQ 363
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L L SNL + GK +H +K L ++ + SL++ Y K
Sbjct: 239 PNASTLSSVL-----LGCSNLSALG--FGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGD 291
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD-SVSWTTIIV 118
+S A +F EM + + +WN ++S YA+ G A +F M + +W T +V
Sbjct: 292 LSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVV 347
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/625 (38%), Positives = 370/625 (59%), Gaps = 4/625 (0%)
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-VTNSLLNMYAKVGDEMMAKAV 202
+ FT V C A + +H+ ++T L V N L++MYA +G A+
Sbjct: 101 SAFTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRA 160
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + +K+ W V+ + G LD AR Q ER+VV+W S+IAGYS+ G +A+
Sbjct: 161 FDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAV 220
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F ML D ++PD+ + LSAC+ L+ L+ G+ +H + + T + LI
Sbjct: 221 YCFNCMLSDG-VEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDM 279
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + AQ + + G + ++DGY K+G + AR +FD + RDV+ + +
Sbjct: 280 YAKCGDIAQAQAVFDAVGRGQ-KPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNS 338
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY +G +DA++LF + R G + +N+T+ ++L+ +SL +L G+ +HAS +
Sbjct: 339 MITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI 398
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + AL+ MY K G ++ A VF+ + R + +W++MI LA +G+G +A++ F
Sbjct: 399 VEEDVYLVTALVDMYMKCGRVDEATAVFHRMGER-DVHTWSAMIAGLAFNGMGMDALESF 457
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M G +P +TY+ VLTAC+H L+ +G++++N M+++HK+ P H+ M+DLL R
Sbjct: 458 CQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLAR 517
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+GLL EA + ++ MP++P+ V W S+LSACRVHKN+DL + AAE LL + P+ Y L
Sbjct: 518 SGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQL 577
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y +W +A IR M+ GVKKT G+S + + +VH F V D HP I M
Sbjct: 578 YNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMM 637
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+I +K G+ P T+ + DV+E+ KEQ L HSEK+AIAFGLIS P N + IMKNL
Sbjct: 638 EEIARRLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNL 697
Query: 743 RVCNDCHSAIKFICKLVDREIVVRD 767
RVC DCHSAIK I +L +REI+VRD
Sbjct: 698 RVCEDCHSAIKLISQLWNREIIVRD 722
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 250/487 (51%), Gaps = 39/487 (8%)
Query: 33 KLVHARIIKCGLHLSV-FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
+++HA ++ L + + N L++ YA A++ FDE+PVK W T++ +
Sbjct: 122 RMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVR 181
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G LD A + P R+ VSWT++I Y+ GR +A+ F M+ D V P + V
Sbjct: 182 WGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGA 241
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RLKN 210
L++C+ L +L G+ +H V K + + +L++MYAK GD A+AVFD + R +
Sbjct: 242 LSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQK 301
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
WNV++ + G +D+AR+ FDQM RDV+T+NSMI GY +G +AL +F L+
Sbjct: 302 PEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQ-LR 360
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
++ D FT+ S L+ACA+L L G+ +HA
Sbjct: 361 RHGMRADNFTVVSLLTACASLGALPQGRALHA---------------------------S 393
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
I Q+IVE+ +V T L+D Y+K G + A +F + +RDV W+AM+ G N
Sbjct: 394 IEQRIVEE------DVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFN 447
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G+ DA+E F M R+G +P + T A+L+ S + L+ G+Q H + +RS +
Sbjct: 448 GMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQ-HFNEMRSLHKLHPQIE 506
Query: 451 N--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ +I + +++G ++ A + + + V W S++ A H + A E +L+L
Sbjct: 507 HYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKL 566
Query: 509 GIKPDHI 515
+ D +
Sbjct: 567 APEEDAV 573
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 140/276 (50%), Gaps = 33/276 (11%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV-KTLCSWN 83
K +N G+L+H + K + ++ L +L++ YAK I+ A+ VFD + + WN
Sbjct: 247 KLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWN 306
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
I+ Y K G +D+A +F+ M RD +++ ++I Y GR ++A+++F+++ + +
Sbjct: 307 VIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRA 366
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
FTV S+L +C +LG L G+ +H+ + + + V + +L++MY K G A AVF
Sbjct: 367 DNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVF 426
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+M ERDV TW++MIAG + NG +AL
Sbjct: 427 -------------------------------HRMGERDVHTWSAMIAGLAFNGMGMDALE 455
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
F M +D +P T + L+AC++ L G+Q
Sbjct: 456 SFCQMKRD-GFQPTSVTYIAVLTACSHSSLLNEGRQ 490
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/760 (35%), Positives = 419/760 (55%), Gaps = 102/760 (13%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VH +I GL V + N L+N YAK SI+ A++
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR--------------------- 370
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VF M ++DSVSW ++I ++ G F A+ + M + +LP FT+ S
Sbjct: 371 ----------VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L+SC +L G+++H +K G+ N
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGID-------------------------------LN 449
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EALGMFANML 269
VS N +++L+ +G L+ R F M E D V+WNS+I +++ EA+ F N
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + K ++ T +S LSA ++L +LGKQIH ++ NALI+CY K G +
Sbjct: 510 R-AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ +KI + A R RD V W +M+ GY
Sbjct: 569 DGCEKIFSRM-------------------------AER-------RDNVTWNSMISGYIH 596
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N L A++L M++ G + +++ + +LS +S+A+L+ G ++HA ++R+ S + V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM-LEL 508
+AL+ MYSK G ++ A R FN + R + SW SMI A+HG GEEA++LFE M L+
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRN-SYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
PDH+T+VGVL+AC+H GL+E+G +++ M + + + P HF+ M D+LGRAG L +
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 569 AYNFIENMPLEPDVVAWGSLLSAC-RVH-KNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+FIE MP++P+V+ W ++L AC R + + +LGK AAE L +EP+N+ Y L N+Y
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 835
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G+WED RK MK VKK G+SWV +++ VH+F D HP D IY K+ ++
Sbjct: 836 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT-TLRIMKNLRVC 745
++++ G+VP T L+D+E++ KE++L +HSEKLA+AF L + +T +RIMKNLRVC
Sbjct: 896 RKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVC 955
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHSA K+I K+ R+I++RD+ RFHHF+ G CSC D+W
Sbjct: 956 GDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 150/590 (25%), Positives = 255/590 (43%), Gaps = 115/590 (19%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
PL F +QS + R + H+R+ K L V+L N+L+N Y +T A+KVF
Sbjct: 6 PLSF----VQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
DEMP++ SW I+S Y++ G K A+
Sbjct: 60 DEMPLRNCVSWACIVSGYSRN-------------------------------GEHKEALV 88
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSA--GKKVHSFVVKTGLSGCVNVTNSLLNM 189
+MV++ + Q+ SVL +C +G + G+++H + K + V+N L++M
Sbjct: 89 FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148
Query: 190 YAK-VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y K +G A F + +KN SWN ++S+
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISV---------------------------- 180
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK--LKLGKQIHAYIIR 306
YSQ G A +F++M D S +P ++T S ++ +L + ++L +QI I +
Sbjct: 181 ---YSQAGDQRSAFRIFSSMQYDGS-RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ VG+ L+S +AK G +SY AR
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSG------------SLSY---------------------AR 263
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF---RSMVREGPKPNNYTLSAMLSVS- 422
++F+ + R+ V ++VG + ++A +LF SM+ P+ LS+ S
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 423 SSLASLDHGKQIHASALRSGEASSL-SVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L G+++H + +G + + N L+ MY+K G+I ARRVF + +++VS
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVS 382
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W SMI L Q+G EA++ ++ M I P T + L++C + GQ+ +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ I S +++ L G L E +MP E D V+W S++ A
Sbjct: 443 KL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 246/525 (46%), Gaps = 77/525 (14%)
Query: 83 NTILSAYAKQ-GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
N ++S Y K G + A F + ++SVSW +II Y++ G ++A R+F M D
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 142 LPTQFTVTSVLASCTALG--DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
PT++T S++ + +L D+ +++ + K+GL + V + L++ +AK G A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ V F+QM R+ VT N ++ G + +
Sbjct: 263 RKV-------------------------------FNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 260 EALGMFANMLKDSSLKPDKFT-LASTLSACANLEK--LKLGKQIHAYIIRTEF-DATGPV 315
EA +F +M + P+ + L S+ + E+ LK G+++H ++I T D +
Sbjct: 292 EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN L++ YAK G I ARR+F + D+
Sbjct: 352 GNGLVNMYAKC---------------------------------GSIADARRVFYFMTDK 378
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V+W +M+ G +QNG +AVE ++SM R P ++TL + LS +SL G+QIH
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+L+ G ++SVSNAL+T+Y++ G +N R++F+ + + VSW S+I ALA+
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALARSERS 497
Query: 496 -EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHF 553
EA+ F G K + IT+ VL+A + E G++ + + +KN I +
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN--NIADEATTE 555
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
+++ G+ G + M D V W S++S +H L
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNEL 599
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 126/554 (22%), Positives = 231/554 (41%), Gaps = 124/554 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +LIS L A L + L G+ +H +K G+ L+V + N+LM YA+T
Sbjct: 413 PGSFTLISSLSSCASLKWAKL-------GQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
++ +K+F MP SWN+I+ A A+ R S +V
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSER-----------------SLPEAVVC---- 504
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F NA R ++ F+ S + G+L GK++H +K ++
Sbjct: 505 --FLNAQR-----AGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTE 555
Query: 184 NSLLNMYAKVGDEMMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
N+L+ Y K G+ + +F M R NV+
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVT----------------------------- 586
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
WNSMI+GY N +AL + ML+ + + D F A+ LSA A++ L+ G ++H
Sbjct: 587 ---WNSMISGYIHNELLAKALDLVWFMLQ-TGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
A +R ++ VG+AL+ Y+K G ++ A
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYAL---------------------------- 674
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY-TLSAMLS 420
R F+++ R+ +W +M+ GY ++G ++A++LF +M +G P ++ T +LS
Sbjct: 675 -----RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 421 VSSSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S L+ G K + + G A + + + + +AG ++ + +
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 480 VSWTSMIVALAQHG-----LGEEAIQLFERMLELGIKPDH-ITYVGVLTACTHGGLVEQG 533
+ W +++ A + LG++A ++ ++P++ + YV + G + G
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEML-----FQLEPENAVNYVLL------GNMYAAG 838
Query: 534 QRYYNMMKNVHKIK 547
R+ +++K K+K
Sbjct: 839 GRWEDLVKARKKMK 852
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/690 (35%), Positives = 400/690 (57%), Gaps = 39/690 (5%)
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
A +VF+ + R++ SW+ ++ Y + ++ A+ ++ EMV++++ +T++SVLA+CT
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 158 LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RLKNVSSWNV 216
L D+ G+ V + G V V SL++++AK G A++VF M ++++ S V
Sbjct: 61 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIIS--V 118
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+ + G L +++ F M +DVV+WN+MIA Y+ G+D +A +F M P
Sbjct: 119 TAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGH-TP 177
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D +T +S L ACA+ ++L+ G+ +H I FD + N LIS Y + G +E
Sbjct: 178 DIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLE------ 231
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
ARR F S+ +++ AW ML Y Q KDA
Sbjct: 232 ---------------------------SARRYFYSIEKKELGAWNTMLAAYAQFDKGKDA 264
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ L+++M+ EG P+ +T S+++ +SL +L GK IH + G + + AL+ M
Sbjct: 265 LFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNM 324
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y+K G++ A++ F+ I ++ VSW++MI A AQHG EEA++L M GI + +T
Sbjct: 325 YAKCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVT 383
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
VL AC+HGG + +G Y+ + I+ + +DLLGRAG L+EA + + M
Sbjct: 384 ASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTM 443
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P + VA +LL C+VH ++ GK ++++ +EP+N G+Y L N+Y++ G+W+D A
Sbjct: 444 PFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAAGRWDDVA 503
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK-EMGFV 695
+R+ M+ GVK+ G S ++ ++K++ F V D +P+ I ++ +++ +K E G+V
Sbjct: 504 KLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYV 563
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
PDT V HDV +D KE++L+ HSEK+A+ FGLI++P +TLRI+KNLRVC+DCH+ K
Sbjct: 564 PDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLA 623
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+ R I+VRD TRFHHF+ G+CSC DYW
Sbjct: 624 SKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 198/464 (42%), Gaps = 69/464 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM-PVKTLCSWNTILSAYA 90
G++V + + G V + SL++ +AK + A+ VF M ++ + S ++ AY
Sbjct: 67 GRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYC 126
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G L + +F M +D VSW +I Y G K+A +F M P +T +S
Sbjct: 127 --GSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSS 184
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C + L G+ +H + G + N+L++MY + G A+ F + K
Sbjct: 185 ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKE 244
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ +WN +++ A AQFD+ G D AL ++ NML
Sbjct: 245 LGAWNTMLA----------AYAQFDK-------------------GKD--ALFLYKNMLL 273
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ PD+FT +S + +CA+L L+ GK IH F+ +G AL++ YAK G
Sbjct: 274 E-GFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCG--- 329
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+ A++ FD + ++DVV+W+AM+ Q+
Sbjct: 330 ------------------------------SLADAKKSFDGISNKDVVSWSAMIAASAQH 359
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSV 449
G ++A+EL M +G N T S++L S L G + G
Sbjct: 360 GHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEEN 419
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ I + +AG + A V + + ++ V+ +++ HG
Sbjct: 420 TVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHG 463
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/778 (34%), Positives = 415/778 (53%), Gaps = 105/778 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA +L + + ++ +GK++H I CGL VFL N L++ Y K E
Sbjct: 113 YAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCE------------- 159
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
R+D A +F D+VSW ++I Y +G ++ +++ V+
Sbjct: 160 ------------------RIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVK 201
Query: 136 MVQDQVLPTQFTVTSVLASC-TALGDL-SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M + FT+ S L SC L ++ S GK +H + VK GL + V +LL+MYAK
Sbjct: 202 MHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKT 261
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G + D ++L F ++VV +N+MIAG+
Sbjct: 262 G------YLGDAIQL-------------------------FRTSPNQNVVMYNAMIAGFI 290
Query: 254 QNG-----YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
Q +EAL +F+ M + +KP FT +S + C ++E + GKQIHA+I +
Sbjct: 291 QTEDIDKECAYEALKLFSQMQRQG-IKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHN 349
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ +G+ LI Y+ +G E +
Sbjct: 350 IQSDEFIGSTLIELYSLLGSTE---------------------------------DQLKC 376
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+S D+V+WT M+ GY QNG + A+ LF ++ G KP+ + ++ MLS + +A+
Sbjct: 377 FNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAE 436
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+Q+H A+++G + V N+ I+MY+K+GN+++A+ F I + VSW+ MI +
Sbjct: 437 RSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK-NPDVVSWSVMICS 495
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
AQHG ++AI LFE M GI P+ IT++GVLTAC+HGGLVE+G RYY MK + +K
Sbjct: 496 NAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKI 555
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H +VDLL RAG L +A NFI N V W +LLS CR++K++ GK AEKL
Sbjct: 556 NVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKL 615
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+ ++P S +Y L N+Y+ G A IR+ MK G++K G SW+++ N+VH F V
Sbjct: 616 IELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVG 675
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM-LRHHSEKLAIAFGL 727
D HP IY K+ + ++ +++G++ + ++VK + + HHSEKLA++FG+
Sbjct: 676 DISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGI 735
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+S P + +++MKNLRVC+DCH+ +K I + REI++RD+ RFHHFK+G CSC DYW
Sbjct: 736 VSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 267/602 (44%), Gaps = 117/602 (19%)
Query: 7 PSLISPLE--FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
PS+ PL+ Y L+Q + KS + GKL HA +IK + +FL N+ +N Y+K +
Sbjct: 2 PSVF-PLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEM 60
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
A+K+FD M R +S+ +I Y +G
Sbjct: 61 GNAQKLFDR-------------------------------MSERSVISYNILISGYGGMG 89
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
+ AI +F E + +F+ VL++C + D + GK +H + GL V +TN
Sbjct: 90 FYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTN 149
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
L++MY K R+D AR F+ E D V+
Sbjct: 150 LLIDMYCKC-------------------------------ERIDHARLLFESSDELDNVS 178
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLEKL-KLGKQIHA 302
WNS+I GY++ G E L + M + L+ + FTL S L +C NL + GK +H
Sbjct: 179 WNSLITGYARVGAYEEMLKLLVKM-HHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHG 237
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
Y ++ D VG AL+ YAK G YL
Sbjct: 238 YTVKQGLDLDIVVGTALLDMYAKTG---------------YL------------------ 264
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQN-GLNK----DAVELFRSMVREGPKPNNYTLSA 417
G A ++F + +++VV + AM+ G+ Q ++K +A++LF M R+G KP+++T S+
Sbjct: 265 GDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSS 324
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
++ + + + + ++GKQIHA + S + + LI +YS G+ + FN +
Sbjct: 325 IIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTP-KL 383
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+ VSWT+MI AQ+G E A+ LF +L G KPD +L+AC G++ +
Sbjct: 384 DIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVH 443
Query: 538 NMMKNVHKIKPTPSHFA----SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+ +K A S + + ++G L A E + PDVV+W ++ +
Sbjct: 444 G-----YAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK-NPDVVSWSVMICSNA 497
Query: 594 VH 595
H
Sbjct: 498 QH 499
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 27/257 (10%)
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y K G++G A+++FD + +R V+++ ++ GY G A+ LF K + ++
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+ +LS + GK IH A+ G + ++N LI MY K I+ AR +F
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSD- 172
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC----------- 524
+ VSW S+I A+ G EE ++L +M G++ + T L +C
Sbjct: 173 ELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYG 232
Query: 525 --THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
HG V+QG ++ + T +++D+ + G L +A P +V
Sbjct: 233 KTLHGYTVKQGL-------DLDIVVGT-----ALLDMYAKTGYLGDAIQLFRTSP-NQNV 279
Query: 583 VAWGSLLSACRVHKNLD 599
V + ++++ +++D
Sbjct: 280 VMYNAMIAGFIQTEDID 296
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/608 (37%), Positives = 366/608 (60%), Gaps = 45/608 (7%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+V+L+ + G + L+R FDQ+ ++DV WNSMI+ Y NG+ EA+G F +L S ++P
Sbjct: 57 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 116
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D +T L AC L G++IH + + F V +LI Y++ G IA+ +
Sbjct: 117 DFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 173
Query: 337 E------------------QSG------------------ISYLNVIA-FTTLLDGYIKI 359
+ Q+G ++++ V++ +D Y K+
Sbjct: 174 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKL 233
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK--PNNYTLSA 417
G + A ++F+ + +DV++W ++ GY QNGL +A+E+++ M+ E + PN T +
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK-MMEECKEIIPNQGTWVS 292
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
+L + + +L G +IH +++ + V+ LI +Y K G + A +F + ++
Sbjct: 293 ILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QE 351
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+V+W ++I HG E+ ++LF ML+ G+KPDH+T+V +L+AC+H G VE+G+ +
Sbjct: 352 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 411
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+M+ + IKP+ H+ MVDLLGRAG L+ AY+FI++MPL+PD WG+LL ACR+H N
Sbjct: 412 RLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 470
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
++LGK A+++L ++ N G Y L N+Y++ GKWE +R + G+KKT G+S ++
Sbjct: 471 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 530
Query: 658 IQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHH 717
+ KV VF + HP+ IY ++ + ++K +G++PD + VL DVEED KE +L H
Sbjct: 531 VNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSH 590
Query: 718 SEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
SE+LAIAFG+ISTP + +RI KNLRVC DCH+A KFI ++ REIVVRD+ RFHHFK G
Sbjct: 591 SERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDG 650
Query: 778 LCSCRDYW 785
+CSC DYW
Sbjct: 651 ICSCGDYW 658
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 220/526 (41%), Gaps = 108/526 (20%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
++ PF K +HA ++ G S+F+ L+N YA +S ++ FD++
Sbjct: 30 TKTPF-AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQI----------- 77
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPT 144
P +D +W ++I Y G F AI F +++ ++ P
Sbjct: 78 --------------------PQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 117
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C L D G+K+H + K G V V SL++MY++ G +A+++FD
Sbjct: 118 FYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 174
Query: 205 GMRLKNVSSWNVVVSLHIHSGR-------------------------------------- 226
M +++ SWN ++S I +G
Sbjct: 175 DMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLG 234
Query: 227 -LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
LD A F+ + +DV++WN++I GY+QNG EA+ ++ M + + P++ T S L
Sbjct: 235 LLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 294
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
A A++ L+ G +IH +I+T +L+
Sbjct: 295 PAYAHVGALQQGMKIHGRVIKTNL---------------------------------HLD 321
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
V T L+D Y K G + A +F + V W A++ + +G + ++LF M+
Sbjct: 322 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 381
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
EG KP++ T ++LS S ++ GK G SL ++ + +AG +
Sbjct: 382 EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEM 441
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
A + + + W +++ A HG E +R+ E+ K
Sbjct: 442 AYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSK 487
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 179/424 (42%), Gaps = 89/424 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA--- 88
G+ +H K G +VF+ SL++ Y++ A+ +FD+MP + + SWN ++S
Sbjct: 134 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 193
Query: 89 ------------------------------------YAKQGRLDLACEVFNLMPNRDSVS 112
YAK G LD A +VF ++P +D +S
Sbjct: 194 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVIS 253
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
W T+I Y + G AI ++ M + +++P Q T S+L + +G L G K+H V
Sbjct: 254 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 313
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH-IHSGRLDLA 230
+KT L V V L+++Y K G + A ++F + ++ +WN ++S H IH
Sbjct: 314 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH------- 366
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
G+ + L +F ML D +KPD T S LSAC++
Sbjct: 367 -------------------------GHAEKTLKLFGEML-DEGVKPDHVTFVSLLSACSH 400
Query: 291 LEKLKLGKQ----IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE----QSGIS 342
++ GK + Y I+ G ++ + G +E+A ++ Q S
Sbjct: 401 SGFVEEGKWCFRLMQEYGIKPSLKHYG----CMVDLLGRAGYLEMAYDFIKDMPLQPDAS 456
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
+ + G I++G + R+F+ D V + +L N + V+ RS
Sbjct: 457 IWGALLGACRIHGNIELGKFA-SDRLFEV--DSKNVGYYVLLSNIYANVGKWEGVDKVRS 513
Query: 403 MVRE 406
+ RE
Sbjct: 514 LARE 517
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP- 408
T L++ Y +GD+ +R FD + +DV AW +M+ Y NG +A+ F ++
Sbjct: 55 TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 114
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
+P+ YT +L +L G++IH A + G ++ V+ +LI MYS+ G AR
Sbjct: 115 RPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARS 171
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F+ + +R + SW +MI L Q+G +A+ + + M GIK + +T V +L
Sbjct: 172 LFDDMPFR-DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV----- 225
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
VD+ + GLL A+ E +P++ DV++W +L
Sbjct: 226 ---------------------------FVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTL 257
Query: 589 LSA 591
++
Sbjct: 258 ITG 260
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 49/304 (16%)
Query: 4 PNPPSLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
PN + +S L YAH+ LQ +K +H R+IK LHL VF+ L++ Y K
Sbjct: 285 PNQGTWVSILPAYAHVGALQQGMK---------IHGRVIKTNLHLDVFVATCLIDVYGKC 335
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
GRL A +F +P SV+W II +
Sbjct: 336 -------------------------------GRLVDAMSLFYQVPQESSVTWNAIISCHG 364
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
G + +++F EM+ + V P T S+L++C+ G + GK + + G+ +
Sbjct: 365 IHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLK 424
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVV-SLHIHSGRLDLARAQFDQMIE 239
++++ + G MA M L+ + S W ++ + IH G ++L + D++ E
Sbjct: 425 HYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH-GNIELGKFASDRLFE 483
Query: 240 RDV--VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
D V + +++ N +E + ++ ++ LK K ST+ ++ G
Sbjct: 484 VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLK--KTPGWSTIEVNRKVDVFYTG 541
Query: 298 KQIH 301
Q H
Sbjct: 542 NQSH 545
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/576 (38%), Positives = 354/576 (61%), Gaps = 17/576 (2%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + AR FD + E V +WN M GYS+ + ++ ML + ++KPD +T
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEML-ERNVKPDCYTYPFL 120
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L+LG+++H ++++ D+ NALI+ Y+ G +++A+ I + S S +
Sbjct: 121 FKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDV 180
Query: 345 ---------------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+VI++T ++ G++ G + AR+ F + +RD V+WTAM+ GY +
Sbjct: 181 VTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLR 240
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
K+A+ LFR M KP+ +T+ ++L+ + L +L+ G+ I ++ + V
Sbjct: 241 LNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFV 300
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI MY K GN+ A +FN + R + +WT+M+V LA +G GEEA+ +F +ML+
Sbjct: 301 GNALIDMYFKCGNVEMALSIFNTLPQR-DKFTWTAMVVGLAINGCGEEALNMFSQMLKAS 359
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+ PD +TYVGVL+ACTH G+V++G++++ M H I+P +H+ MVDLLG+AG L+EA
Sbjct: 360 VTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEA 419
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ I+NMP++P+ + WG+LL ACR+HK+ ++ + A E++L +EP+N Y CN+Y++C
Sbjct: 420 HEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAAC 479
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KW+ +R+ M G+KKT G S +++ VH F D HPQ IY K+ K+ ++
Sbjct: 480 NKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDL 539
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K G+ P+T+ V D+ E+ KE + HSEKLAIAFGLI++ T+RI+KNLR+C DCH
Sbjct: 540 KIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCH 599
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + K+ DRE++VRD TRFHHF+ G CSC+DYW
Sbjct: 600 HVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 238/525 (45%), Gaps = 95/525 (18%)
Query: 3 TPNPP-SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
T NPP SL + HL Q +H+R IK G+ + ++N +++F
Sbjct: 13 TENPPLSLFETCKSMYHLKQ-------------IHSRTIKTGIICNPIIQNKILSFCCSR 59
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
E F +M YA+Q +F+ +P SW + Y+
Sbjct: 60 E--------FGDM-------------CYARQ--------LFDTIPEPSVFSWNIMFKGYS 90
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
I K + +++EM++ V P +T + T L G+++H VVK GL V
Sbjct: 91 RIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVF 150
Query: 182 VTNSLLNMYAKVGDEMMAKAVFD-----------------GMRLKNVSSWNVVVSLHIHS 224
N+L+NMY+ G MA+ +FD K+V SW +V+ +++
Sbjct: 151 AHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNT 210
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G++D AR F +M ERD V+W +MI GY + EAL +F M + S +KPD+FT+ S
Sbjct: 211 GQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREM-QTSKIKPDEFTMVSV 269
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L+ACA L L+LG+ I YI + + VGNALI Y K G VE+A
Sbjct: 270 LTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALS---------- 319
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
IF++L RD WTAM+VG NG ++A+ +F M+
Sbjct: 320 -----------------------IFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQML 356
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNI 463
+ P+ T +LS + +D GK+ AS R G +++ ++ + KAG++
Sbjct: 357 KASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHL 416
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
A + + + ++ W +++ A H E A + E++LEL
Sbjct: 417 KEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILEL 461
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/681 (37%), Positives = 385/681 (56%), Gaps = 64/681 (9%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
MP R++VSWTT++ ++ +A+ F M + V PT+F ++S + ALG G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
++H V+ G + V ++L +MY+K G A VFD M K+ +W
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAW---------- 110
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
+MI GY++NG A+ F +M ++ + D+ S
Sbjct: 111 ---------------------TAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSV 149
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
LSA L+ L K IH + + F+ V NALI YAK VE A ++++ +
Sbjct: 150 LSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW- 208
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
NV++ T+++DGYI+ + A I+ LR
Sbjct: 209 NVVSGTSMIDGYIETDCVEEALVIYVELR------------------------------- 237
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
R+G +PN +T S+M+ + A L+ G Q+HA +++ V + L+ MY K G I+
Sbjct: 238 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+ ++FN I +R + ++W ++I AQHG G EAIQ F+RM+ GI+P+HI +V +LTAC
Sbjct: 298 LSMQLFNEIEYRTD-IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 356
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+H GLV++G +Y+ MK H I+P H++ ++D GRAG L EAY FI MP++P+
Sbjct: 357 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 416
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
W SLL ACR+ + +LG++AA+ L+ +EP N+G + +L +Y+S G+WED +RK M+
Sbjct: 417 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 476
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
+KK GFSWV K HVFG EDW HPQ+ IY K+ ++ IKE G++PDT+ + +
Sbjct: 477 SRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCN 536
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+E+ KE++LR+HSE++A+AF LIS P + + KNLR+C DCH+A KFICK+ R+I+
Sbjct: 537 LEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDII 596
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
VRD +RFHHF G CSC DYW
Sbjct: 597 VRDNSRFHHFVNGRCSCGDYW 617
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 193/440 (43%), Gaps = 70/440 (15%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFT 147
Y+K G L AC VF+ MP +D+V+WT +I Y + G + A+ F +M ++ ++ Q
Sbjct: 86 YSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHV 145
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
SVL++ L D K +H V K G V V N+L++MYAK D A V
Sbjct: 146 FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK--- 202
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ WNVV SG SMI GY + EAL ++
Sbjct: 203 -IDPGGWNVV------SG--------------------TSMIDGYIETDCVEEALVIYVE 235
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
L+ ++P++FT +S + CA L+ G Q+HA +I+T+ VG+ L+ Y K G
Sbjct: 236 -LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCG 294
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ ++ + +F+ + R +AW A++ +
Sbjct: 295 LISLSMQ---------------------------------LFNEIEYRTDIAWNAVINVF 321
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASS 446
Q+G ++A++ F M+ G +PN+ ++L+ S +D G K ++ G
Sbjct: 322 AQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPK 381
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFE 503
+ +I Y +AG ++ A + + + + W S++ A G LGE A Q
Sbjct: 382 EEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLM 441
Query: 504 RMLELGIKPDHITYVGVLTA 523
+ LE G H++ G+ +
Sbjct: 442 K-LEPGNTGIHVSLSGIYAS 460
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L ++ ++ ++ K +H + K G L V ++N+L++ YAK+ + A +V P
Sbjct: 146 FCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDP 205
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
WN VS T++I Y E + A+ ++VE
Sbjct: 206 ----GGWNV--------------------------VSGTSMIDGYIETDCVEEALVIYVE 235
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ + V P +FT +S++ C L G ++H+ V+KT L V ++L++MY K G
Sbjct: 236 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGL 295
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAG 251
++ +F+ + + +WN V+++ G A FD+MI + + + S++
Sbjct: 296 ISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTA 355
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDK 278
S G E L F +M + ++P +
Sbjct: 356 CSHAGLVDEGLKYFYSMKEAHGIEPKE 382
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+T++ Y K G + L+ ++FN + R ++W +I + + G + AI+ F M+ +
Sbjct: 284 STLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIR 343
Query: 143 PTQFTVTSVLASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P S+L +C+ G + G K +S G+ + +++ Y + G A
Sbjct: 344 PNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYK 403
Query: 202 VFDGMRLK-NVSSW 214
M +K N W
Sbjct: 404 FISEMPIKPNAYGW 417
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/741 (34%), Positives = 394/741 (53%), Gaps = 72/741 (9%)
Query: 46 LSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM 105
L F S+++ + ++ + + ++ V T +++ + G +D A + F +
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT-----ALVTMCVRCGDVDSAKQAFKGI 290
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
+RD V + +I + G A + M D V + T S+L +C+ L AGK
Sbjct: 291 ADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGK 350
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
+HS + + G S V + N+L++MYA+ GD
Sbjct: 351 LIHSHISEDGHSSDVQIGNALISMYARCGD------------------------------ 380
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
L AR F M +RD+++WN++IAGY++ EA+ ++ M + +KP + T L
Sbjct: 381 -LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM-QSEGVKPGRVTFLHLL 438
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SACAN GK IH I+R+ + G + NAL++ Y + G + AQ +
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV---------- 488
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
F+ + RDV++W +M+ G+ Q+G + A +LF+ M
Sbjct: 489 -----------------------FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQN 525
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
E +P+N T +++LS + +L+ GKQIH SG +++ NALI MY + G++
Sbjct: 526 EELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQD 585
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP-DHITYVGVLTAC 524
AR VF+ + R + +SWT+MI A G +AI+LF +M G +P D T+ +L+AC
Sbjct: 586 ARNVFHSLQHR-DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSAC 644
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
H GLV +G + ++ M++ + + PT H+ +V LLGRA QEA I MP PD
Sbjct: 645 NHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAV 704
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
W +LL ACR+H N+ L + AA L + N Y L N+Y++ G+W+D A IR+ M+
Sbjct: 705 WETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEG 764
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
G++K G SW+++ N +H F D HP+ IY ++ ++ E++E G+ PDT VLHD
Sbjct: 765 RGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHD 824
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+ + +E L HSE+LAIA+GLI TP T +RI KNLR+C DCH+A KFI KLV REI+
Sbjct: 825 LGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREII 884
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
RD+ RFH FK G CSC DYW
Sbjct: 885 ARDSNRFHSFKNGKCSCEDYW 905
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 181/673 (26%), Positives = 299/673 (44%), Gaps = 145/673 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LLQ+ + R K +HA++++ G+ +FL N L+N Y K S+ A +VF EM
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM- 88
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
P RD +SW ++I Y + G K A ++F E
Sbjct: 89 ------------------------------PRRDVISWNSLISCYAQQGFKKKAFQLFEE 118
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M +P + T S+L +C + +L GKK+HS ++K G V NSLL+MY K GD
Sbjct: 119 MQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGD 178
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF G+ ++V S+N ++ L Y+Q
Sbjct: 179 LPRARQVFAGISPRDVVSYNTMLGL-------------------------------YAQK 207
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
Y E LG+F M + PDK T + L A L GK+IH + ++ V
Sbjct: 208 AYVKECLGLFGQM-SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G AL++ + G D+ A++ F + DR
Sbjct: 267 GTALVTMCVRCG---------------------------------DVDSAKQAFKGIADR 293
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVV + A++ Q+G N +A E + M +G N T ++L+ S+ +L+ GK IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ G +S + + NALI+MY++ G++ AR +F + R + +SW ++I A+
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR-DLISWNAIIAGYARREDR 412
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFA 554
EA++L+++M G+KP +T++ +L+AC + G+ + +++++ K + H A
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIK---SNGHLA 469
Query: 555 -SMVDLLGRAGLLQEAYNFIE----------------------------------NMPLE 579
+++++ R G L EA N E N LE
Sbjct: 470 NALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529
Query: 580 PDVVAWGSLLSACRVHKNLDLGK-----IAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
PD + + S+LS C+ + L+LGK I L L + +AL N+Y CG +D
Sbjct: 530 PDNITFASVLSGCKNPEALELGKQIHGRITESGLQL----DVNLGNALINMYIRCGSLQD 585
Query: 635 AANIRKSMKYVGV 647
A N+ S+++ V
Sbjct: 586 ARNVFHSLQHRDV 598
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 155/611 (25%), Positives = 265/611 (43%), Gaps = 138/611 (22%)
Query: 140 QVLPTQF---TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
Q PT+ T ++L +CT L K++H+ +V+ G+ + ++N L+NMY K
Sbjct: 19 QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
+ A VF M ++V SW NS+I+ Y+Q G
Sbjct: 79 LDAHQVFKEMPRRDVISW-------------------------------NSLISCYAQQG 107
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+ +A +F M +++ P+K T S L+AC + +L+ GK+IH+ II+ + V
Sbjct: 108 FKKKAFQLFEEM-QNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N+L+S Y K G + A+++ +GIS +V+++ T
Sbjct: 167 NSLLSMYGKCGDLPRARQVF--AGISPRDVVSYNT------------------------- 199
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
ML Y Q K+ + LF M EG P+ T +L ++ + LD GK+IH
Sbjct: 200 ------MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+ G S + V AL+TM + G++++A++ F I R + V + ++I ALAQHG
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR-DVVVYNALIAALAQHGHNV 312
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-- 554
EA + + RM G+ + TY+ +L AC+ +E G K +H H +
Sbjct: 313 EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG-------KLIHSHISEDGHSSDV 365
Query: 555 ----SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS----------ACRVHKNLDL 600
+++ + R G L +A MP + D+++W ++++ A R++K +
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQS 424
Query: 601 GKIAAEKL----LLIEPDNSGAYS----------------------ALCNLYSSCGKWED 634
+ ++ LL NS AY+ AL N+Y CG +
Sbjct: 425 EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLME 484
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A N+ + G + SW + + G H Q + Y K++ E++
Sbjct: 485 AQNV-----FEGTQARDVISWNSM-----IAG-----HAQHGS-YETAYKLFQEMQNEEL 528
Query: 695 VPDT---ASVL 702
PD ASVL
Sbjct: 529 EPDNITFASVL 539
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H RI + GL L V L N+L+N Y + S+ A+ VF + + + SW ++ A
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609
Query: 91 KQGRLDLACEVFNLMPNR-----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPT 144
QG A E+F M N D ++T+I+ N G ++F M + VLPT
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPT 669
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/658 (37%), Positives = 371/658 (56%), Gaps = 87/658 (13%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++L C G++VH+ ++KT V + L+ +Y K
Sbjct: 248 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS-------------- 293
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
L A FD+M ER+VV+W +MI+ YSQ GY +AL +F +
Sbjct: 294 -----------------LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADV 336
Query: 270 KDS--------------------SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
K S +P++FT A+ L++C + LG+QIH+ II+ +
Sbjct: 337 KISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNY 396
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+ VG ++LLD Y K G I AR +F
Sbjct: 397 EDHVFVG---------------------------------SSLLDMYAKDGKIHEARTVF 423
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ L +RDVV+ TA++ GY Q GL+++A+ELFR + EG K N T + +L+ S LA+LD
Sbjct: 424 ECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALD 483
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
GKQ+H LRS S + + N+LI MYSK GN+ +RR+F+ ++ R +SW +M+V
Sbjct: 484 LGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERT-VISWNAMLVGY 542
Query: 490 AQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH-KIK 547
++HG G E ++LF M E +KPD +T + VL+ C+HGGL ++G +N M + +++
Sbjct: 543 SKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVE 602
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ +VDLLGR+G ++EA+ FI+ MP EP WGSLL ACRVH N+D+G+ A ++
Sbjct: 603 PKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQ 662
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL IEP N+G Y L NLY+S G+WED +++R M V K G S +++ +H F
Sbjct: 663 LLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHA 722
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HP+R+ I K+ ++ KE+G+VPD + VLHDV+E+ KE++L HSEKLA++FGL
Sbjct: 723 SDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGL 782
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I++P + +R++KNLR+C DCH+ K+I K+ RE+ +RD RFH G CSC DYW
Sbjct: 783 IASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 231/503 (45%), Gaps = 86/503 (17%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
E Y +L + R G+ VHA +IK SVFL+ L+ Y K +S+ A VFD
Sbjct: 243 FENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFD 302
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
EMP + + SW ++SAY+++G A + NL +S T + + + N R
Sbjct: 303 EMPERNVVSWTAMISAYSQRG---YASQALNLFFADVKISLTGVYAI--DKLKLSNPNRP 357
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
+V P +FT +VL SCT+ G+++HS ++K V V +SLL+MYAK
Sbjct: 358 WV-----CTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAK 412
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G IH R F+ + ERDVV+ ++I+GY
Sbjct: 413 DGK--------------------------IHEAR-----TVFECLPERDVVSCTAIISGY 441
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+Q G D EAL +F L+ +K + T L+A + L L LGKQ+H +++R+E +
Sbjct: 442 AQLGLDEEALELFRR-LQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSF 500
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+ N+LI Y+K G + +++ IFD++
Sbjct: 501 VVLQNSLIDMYSKCGNLTYSRR---------------------------------IFDTM 527
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHG 431
+R V++W AMLVGY ++G ++ ++LF M E KP++ T+ A+LS S D G
Sbjct: 528 YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 587
Query: 432 KQIHASALRSGE---ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
I + + SG+ + ++ + ++G + A + + W S++ A
Sbjct: 588 LNIF-NDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGA 646
Query: 489 LAQHG---LGEEAIQLFERMLEL 508
H +GE A Q ++LE+
Sbjct: 647 CRVHSNVDIGEFAGQ---QLLEI 666
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 270/786 (34%), Positives = 419/786 (53%), Gaps = 104/786 (13%)
Query: 3 TPNPPSLISPL-EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
+ NP +SPL + +A +L+ LK P + +HA+II GL + FL NSLMN
Sbjct: 13 SSNPTQRLSPLAQPHASILRK-LKDLKPL--QQIHAQIITSGLTHNTFLSNSLMN----- 64
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
AY G L A ++F+ P ++ VSWT +I
Sbjct: 65 --------------------------AYVYCGLLADAKQIFHHTPYKNVVSWTILISGLA 98
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ F AI +F EM+ P T++SVL + LG + K VH F V+ G G V
Sbjct: 99 KNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVF 158
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V +L++MY+K G + +AR F+ M ER+
Sbjct: 159 VETALVDMYSKFG-------------------------------CMGVARQLFESMSERN 187
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
VVTWN++++GYS +G+ EA+ +F N+++ L D +T+ S + A ++ L++G IH
Sbjct: 188 VVTWNAIVSGYSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIH 246
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+IIRT ++ + T L+D Y+
Sbjct: 247 GFIIRTGYENDKHIK---------------------------------TALMDIYVSHNC 273
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLS 420
+ A R+F + +DV AWT ML G+ A++ F M+ + K ++ L +LS
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S +L G+++HA A+++ A+++ V +A+I MY+ GN+ A+R F + ++ V
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGM-GEKDVV 392
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNM 539
W +MI +G G +AI LF +M G+ PD T+V VL AC+H G+V +G Q +Y+M
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+K H I P H+A ++D+LGRAG L AY+FI NMP +PD + +LL ACR+H N+
Sbjct: 453 VKTSHVI-PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG ++K+ +EP+++G Y L N+Y+ G WE R S++ +KK GFS ++I
Sbjct: 512 LGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEIN 571
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+++ F + HPQ I + + +IK+ G+VP+T +L DV +D+K+ +L HHSE
Sbjct: 572 QEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSE 631
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
K+AIAFGL+ T T +RI KNLR C+DCH+A KF+ K+ R +V++DA RFH F+ G+C
Sbjct: 632 KMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVC 691
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 692 SCRDYW 697
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/775 (33%), Positives = 422/775 (54%), Gaps = 101/775 (13%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
+ FY+ L+ + +++ + VH +IK G S FL + L++ Y K S++ A+K+FD
Sbjct: 1 MNFYSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFD 59
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
E +P+R V+W ++I ++ G+ K A+
Sbjct: 60 E-------------------------------LPSRHIVTWNSMISSHISHGKSKEAVEF 88
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-VTNSLLNMYA 191
+ M+ + VLP +T +++ + + LG + G++ H V GL V ++L++MYA
Sbjct: 89 YGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYA 148
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K FD MR A F +++E+DVV + ++I G
Sbjct: 149 K----------FDKMRD---------------------AHLVFRRVLEKDVVLFTALIVG 177
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y+Q+G D EAL +F +M+ + +KP+++TLA L C NL L G+ IH ++++ ++
Sbjct: 178 YAQHGLDGEALKIFEDMV-NRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLES 236
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
V + T+LL Y + I + ++F+
Sbjct: 237 V---------------------------------VASQTSLLTMYSRCNMIEDSIKVFNQ 263
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
L + V WT+ +VG QNG + AV +FR M+R PN +TLS++L SSLA L+ G
Sbjct: 264 LDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVG 323
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+QIHA ++ G + ALI +Y K GN++ AR VF+++ + V+ SMI A AQ
Sbjct: 324 EQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLT-ELDVVAINSMIYAYAQ 382
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
+G G EA++LFER+ +G+ P+ +T++ +L AC + GLVE+G + + ++N H I+ T
Sbjct: 383 NGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTID 442
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
HF M+DLLGR+ L+EA IE + PDVV W +LL++C++H +++ + K+L +
Sbjct: 443 HFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILEL 501
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
P + G + L NLY+S GKW ++ +++ + +KK+ SWV + +VH F D
Sbjct: 502 APGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLS 561
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST- 730
HP+ I+ + + ++K +G+ P+T VL D++E+ K L +HSEKLAIA+ L T
Sbjct: 562 HPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTI 621
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TT+RI KNLRVC DCHS IKF+ L R+I+ RD+ RFHHFK GLCSC+DYW
Sbjct: 622 GRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/635 (37%), Positives = 374/635 (58%), Gaps = 35/635 (5%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C GKK+H ++KTG+ C +++N+L+NMY K G + D + L
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCG------LIQDALNL--- 60
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
F+Q+ RD ++W S++ +Q L MF M K
Sbjct: 61 ----------------------FNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQ 98
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L+PD + A + ACA L +K GKQ+HA I + V ++L+ YAK G +I
Sbjct: 99 DGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDI 158
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+ + + IS N I++T ++ GY + G A ++F + +++++WTA++ G Q+G
Sbjct: 159 GRVVFDS--ISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSG 216
Query: 392 LNKDAVELFRSMVREGPK-PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
D+ LF M +G + + LS+++ S++LA L GKQIH + G SSL VS
Sbjct: 217 NWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVS 276
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+ MY+K ++ AA+++F + R + VSWTS+IV AQHGL EEA+ L+ RML G+
Sbjct: 277 NALVDMYAKCSDVLAAKKIFGRMVQR-DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGL 335
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T+VG++ AC+H GLV +G+ ++N M + I P+ H+ ++DLL R+G L+EA
Sbjct: 336 KPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAE 395
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
N I+ MP +PD W +LLSAC H+N +G A+ LL ++P++ Y L N+Y+S
Sbjct: 396 NLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAA 455
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
WE + +R+ M + VKK G+S + + + VF + HP ++ I+ + ++ E+K
Sbjct: 456 MWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMK 515
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
+ G++PDT+SVLHD+E+ KE+ L HSE+LA+A+GL+ L I+KNLRVC DCH+
Sbjct: 516 KRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHT 575
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KFI +V REIVVRDA R+HHFK G CSC ++W
Sbjct: 576 VLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 241/509 (47%), Gaps = 72/509 (14%)
Query: 16 YAHL---LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
Y+HL LQ+ + ++P +GK +H IIK G+ L N+L+N Y K
Sbjct: 3 YSHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKC----------- 51
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
G + A +FN +P+RD +SW +I+ N+ + M
Sbjct: 52 --------------------GLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSM 91
Query: 133 FVEMV-QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
F M QD + P + ++ +C LG + GK+VH+ + + +S V +SL++MYA
Sbjct: 92 FPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYA 151
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K G + + VFD + KN SW ++S + SGR A F +M +++++W ++I+G
Sbjct: 152 KCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISG 211
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Q+G ++ +F M D F L+S + A ANL L LGKQIH +I +++
Sbjct: 212 LVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYES 271
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
+ V NAL+ YAK D+ A++IF
Sbjct: 272 SLFVSNALVDMYAKC---------------------------------SDVLAAKKIFGR 298
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ RD+V+WT+++VG Q+GL ++A+ L+ M+ G KPN T ++ S + + G
Sbjct: 299 MVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKG 358
Query: 432 KQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
+ S ++ G SL L+ + S++G++ A + + ++ + +W +++ A
Sbjct: 359 RYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACN 418
Query: 491 QHGLGEEAIQLFERMLELGIKP-DHITYV 518
H I++ + +L L KP D TY+
Sbjct: 419 HHRNTLIGIRVADHLLSL--KPEDPSTYI 445
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 362/638 (56%), Gaps = 68/638 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++L +C L G++VH+ ++KT + LL Y K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC-------------- 102
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
L+ AR D+M E++VV+W +MI+ YSQ G+ EAL +FA M+
Sbjct: 103 -----------------LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM 145
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ S KP++FT A+ L++C L LGKQIH I++ +D+ VG
Sbjct: 146 R-SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG------------- 191
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
++LLD Y K G I AR IF+ L +RDVV+ TA++ GY Q
Sbjct: 192 --------------------SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
GL+++A+E+F + EG PN T +++L+ S LA LDHGKQ H LR +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-EL 508
N+LI MYSK GN++ ARR+F+ + R +SW +M+V ++HGLG E ++LF M E
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERT-AISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+KPD +T + VL+ C+HG + + G ++ M+ + KP H+ +VD+LGRAG +
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA+ FI+ MP +P GSLL ACRVH ++D+G+ +L+ IEP+N+G Y L NLY+
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G+W D N+R M V K G SW+Q + +H F D HP+R+ + KM +I
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISI 530
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++K+ G+VPD + VL+DV+E+ KE+ML HSEKLA+ FGLI+T E +R+ KNLR+C D
Sbjct: 531 KMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVD 590
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ K K+ +RE+ +RD RFH G+CSC DYW
Sbjct: 591 CHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 202/454 (44%), Gaps = 99/454 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL + L R G+ VHA +IK + +L+ L+ FY K + + A+KV DEM
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM- 113
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
P ++ VSWT +I Y++ G A+ +F E
Sbjct: 114 ------------------------------PEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ P +FT +VL SC L GK++H +VK + V +SLL+MYAK G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG- 202
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
++ AR F+ + ERDVV+ ++IAGY+Q
Sbjct: 203 ------------------------------QIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL MF + L + P+ T AS L+A + L L GKQ H +++R E +
Sbjct: 233 GLDEEALEMF-HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI Y+K G +SY ARR+FD++ +R
Sbjct: 292 QNSLIDMYSKCG------------NLSY---------------------ARRLFDNMPER 318
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
++W AMLVGY ++GL ++ +ELFR M E KP+ TL A+LS S D G I
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Query: 435 HAS--ALRSGEASSLSVSNALITMYSKAGNINAA 466
A G ++ M +AG I+ A
Sbjct: 379 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 64/304 (21%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P EF +A +L S +++ +GK +H I+K +F+ +SL++ YAK
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA--------- 201
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
G++ A E+F +P RD VS T II Y ++G + A+
Sbjct: 202 ----------------------GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
MF + + + P T S+L + + L L GK+ H V++ L + NSL++MY
Sbjct: 240 EMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMY 299
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K G+ A+ +FD M ER ++WN+M+
Sbjct: 300 SKCGNLSYARRLFD-------------------------------NMPERTAISWNAMLV 328
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GYS++G E L +F M + +KPD TL + LS C++ G I ++ E+
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEY- 387
Query: 311 ATGP 314
T P
Sbjct: 388 GTKP 391
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 43/283 (15%)
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
E M GP+ + A+L+ +L G+++HA +++ + + L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
K + AR+V + + + VSWT+MI +Q G EA+ +F M+ KP+ T+
Sbjct: 98 GKCDCLEDARKVLDEMP-EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF---ASMVDLLGRAGLLQEAYNFIE 574
VLT+C + G++ + ++ + SH +S++D+ +AG ++EA E
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWN----YDSHIFVGSSLLDMYAKAGQIKEAREIFE 212
Query: 575 NMP----------------------------------LEPDVVAWGSLLSACRVHKNLDL 600
+P + P+ V + SLL+A LD
Sbjct: 213 CLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 601 GKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
GK A +L E P + ++L ++YS CG A + +M
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/700 (36%), Positives = 384/700 (54%), Gaps = 69/700 (9%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
A G L A VFN +PN + + +II Y + AI + M+ + P +
Sbjct: 81 FCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDR 140
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT S+ SC G L GK++H K G + + N+L+NMY+ G + A+ VFD
Sbjct: 141 FTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFD- 196
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+M+ + VV+W +MI Y+Q EA+ +F
Sbjct: 197 ------------------------------KMVNKSVVSWATMIGAYAQWDLPHEAIKLF 226
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M + +S+KP++ TL + L+ACA L+ KQ+H YI
Sbjct: 227 RRM-EIASVKPNEITLVNVLTACARSRDLETAKQVHKYI--------------------- 264
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
+++GI + V+ + L+D Y K G AR +F+ + ++++ W M+
Sbjct: 265 -----------DETGIGFHTVLT-SALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMIN 312
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
G+ ++ ++A+ LF M G K + T++++L + L +L+ GK +H +
Sbjct: 313 GHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEV 372
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+++ AL+ MY+K G+I +A RVF + ++ ++WT++IV LA G G +A++LF M
Sbjct: 373 DVALGTALVDMYAKCGSIESAMRVFQEMP-EKDVMTWTALIVGLAMCGQGLKALELFHEM 431
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
+KPD IT+VGVL AC+H GLV +G Y+N M N + I+P+ H+ MVD+LGRAG
Sbjct: 432 QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGR 491
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
+ EA + I+NMP+ PD LLSACR+H NL + + AA++L+ ++P N G Y L N+
Sbjct: 492 IAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNI 551
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
YSS WE A +R+ M +KK G S +++ VH F D HPQ IY + +
Sbjct: 552 YSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDM 611
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
+K G+VPD + VL D++E KE L HSEKLAIAFGL+ST T +R++KNLRVC
Sbjct: 612 MRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVC 671
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+DCHSA+KFI ++ +REI+VRD RFHHF KG CSCRD+W
Sbjct: 672 SDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 197/450 (43%), Gaps = 102/450 (22%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y+ G L A +VF+ M N+ VSW T+I Y + AI++F M V
Sbjct: 176 NTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVK 235
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + T+ +VL +C DL K+VH ++ +TG+ +T++L+++Y K G +A+ +
Sbjct: 236 PNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDL 295
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M KN+ WN++++ H+ + EAL
Sbjct: 296 FNKMPEKNLFCWNIMINGHVEDSDYE-------------------------------EAL 324
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F N ++ S +K DK T+AS L AC +L L+LGK +H YI + + + +G AL+
Sbjct: 325 SLF-NEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 383
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +E A R+F + ++DV+ WTA
Sbjct: 384 YAKCGSIE---------------------------------SAMRVFQEMPEKDVMTWTA 410
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRS 441
++VG G A+ELF M KP+ T +L+ S ++ G ++ +
Sbjct: 411 LIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKY 470
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S+ ++ M +AG I A E+ IQ
Sbjct: 471 GIQPSIEHYGCMVDMLGRAGRIAEA-----------------------------EDLIQ- 500
Query: 502 FERMLELGIKPDHITYVGVLTAC-THGGLV 530
+ + PD+ VG+L+AC HG LV
Sbjct: 501 -----NMPMAPDYFVLVGLLSACRIHGNLV 525
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 175/379 (46%), Gaps = 41/379 (10%)
Query: 212 SSWNVVVSLHIH-SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
S+ +V +H SG L AR F+Q+ T NS+I GY+ +A+ +F ++
Sbjct: 74 SASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLMM 132
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
L PD+FT S +C L + GKQ+H + + F + + N L++ Y+ G
Sbjct: 133 LQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC-- 187
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+ AR++FD + ++ VV+W M+ Y Q
Sbjct: 188 -------------------------------LVSARKVFDKMVNKSVVSWATMIGAYAQW 216
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
L +A++LFR M KPN TL +L+ + L+ KQ+H +G ++
Sbjct: 217 DLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLT 276
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+AL+ +Y K G AR +FN + + W MI + EEA+ LF M G+
Sbjct: 277 SALMDVYCKCGCYPLARDLFNKMP-EKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV 335
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
K D +T +L ACTH G +E G ++ ++ KI+ + ++VD+ + G ++ A
Sbjct: 336 KGDKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394
Query: 571 NFIENMPLEPDVVAWGSLL 589
+ MP E DV+ W +L+
Sbjct: 395 RVFQEMP-EKDVMTWTALI 412
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 63/273 (23%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
++L + +SR+ K VH I + G+ L ++LM+ Y K A+ +F++MP K
Sbjct: 243 NVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEK 302
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
L WN +++ + E ++ A+ +F EM
Sbjct: 303 NLFCWNIMINGHV-------------------------------EDSDYEEALSLFNEMQ 331
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
V + T+ S+L +CT LG L GK +H ++ K + V + +L++MYAK G
Sbjct: 332 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 391
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A VF M E+DV+TW ++I G + G
Sbjct: 392 SAMRVFQEMP-------------------------------EKDVMTWTALIVGLAMCGQ 420
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
+AL +F M + S +KPD T L+AC++
Sbjct: 421 GLKALELFHEM-QMSEVKPDAITFVGVLAACSH 452
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 39/216 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H I K + + V L +L++ YAK SI A +VF EMP K + +W
Sbjct: 357 LGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTW-------- 408
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
T +IV G+ A+ +F EM +V P T
Sbjct: 409 -----------------------TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVG 445
Query: 151 VLASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VLA+C+ G ++ G +S K G+ + +++M + G A+ + M +
Sbjct: 446 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM- 504
Query: 210 NVSSWNVVVSL----HIHSGRLDLARAQFDQMIERD 241
+ V+V L IH G L +A Q+IE D
Sbjct: 505 -APDYFVLVGLLSACRIH-GNLVVAERAAQQLIELD 538
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/707 (35%), Positives = 387/707 (54%), Gaps = 77/707 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQV 141
N ++S YAK + A VFN MP +D++SW ++I + G AI +F+ M Q Q
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
L + T+ SVL +C AG+ VH + VKTGL G ++ N+LL+MY+
Sbjct: 516 LDS-VTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYS---------- 564
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
N S W + F M +++VV+W +MI Y + G +
Sbjct: 565 --------NCSDWQSTNQI-------------FRSMGQKNVVSWTAMITSYMRAGLFDKV 603
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
G+ M+ D ++PD F + S L A A E LK GK +H Y IR + PV NAL+
Sbjct: 604 AGLLQEMVLDG-IRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALME 662
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K VE AR IFD + ++DV++W
Sbjct: 663 MYVKCRNVE---------------------------------EARLIFDRVTNKDVISWN 689
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY +N ++ LF M+ + +PN T++ +L ++S++SL+ G++IHA ALR
Sbjct: 690 TLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRR 748
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G SNAL+ MY K G + AR +F+ + ++ +SWT MI HG G+ AI L
Sbjct: 749 GFLEDSYASNALVDMYVKCGALLVARVLFDRLT-KKNLISWTIMIAGYGMHGFGKHAIAL 807
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FE+M GI+PD ++ +L AC H GL +G+R++ M+ +KI+P H+ +VDLL
Sbjct: 808 FEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLS 867
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L+EA FIE+MP+EPD W SLL CR+HKN+ L + A+K+ +EP+N+G Y
Sbjct: 868 RTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVL 927
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ +WE ++ + G+++ G+SW+++++KVHVF ++ HP +N+
Sbjct: 928 LANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPD----WNR 983
Query: 682 MAKIWDEI----KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
+A+ D++ ++ G P L ++ V ++ L HS KLA+AFG+++ PE +R
Sbjct: 984 IAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIR 1043
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+ KN +VC+ CH A KFI K+ +REI++RD++RFH F+ G CSCR Y
Sbjct: 1044 VTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 241/512 (47%), Gaps = 63/512 (12%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y++ GR++ A VF+ M RD++SW ++I G A+ +F +M
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ TV SVL +C LG GK VH + VK+GL ++ S ++ A + +K V
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAA-----LGSKLV 357
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER-DVVTWNSMIAGYSQNGYDFEA 261
F +++ G + AR FD M + +V WN ++ GY++ G E+
Sbjct: 358 F----------------MYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEES 401
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + PD+ ++ L L + G H YI++ F A V NALIS
Sbjct: 402 LSLFVQM-HELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALIS 460
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK N+I G A +F+ + +D ++W
Sbjct: 461 FYAKS------------------NMI---------------GDAVLVFNRMPRQDTISWN 487
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+++ G NGLN +A+ELF M +G + ++ TL ++L + G+ +H ++++
Sbjct: 488 SVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKT 547
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S++NAL+ MYS + + ++F + ++ VSWT+MI + + GL ++ L
Sbjct: 548 GLIGETSLANALLDMYSNCSDWQSTNQIFRSMG-QKNVVSWTAMITSYMRAGLFDKVAGL 606
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY--YNMMKNVHKIKPTPSHFASMVDL 559
+ M+ GI+PD L A ++QG+ Y + + K+ P + +++++
Sbjct: 607 LQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVAN---ALMEM 663
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ ++EA I + DV++W +L+
Sbjct: 664 YVKCRNVEEA-RLIFDRVTNKDVISWNTLIGG 694
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 209/500 (41%), Gaps = 100/500 (20%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + +SR F G++VH +K GL L N+L++ Y+ ++F M K
Sbjct: 524 VLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKN 583
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ SW ++++Y + G D +V L+ EMV
Sbjct: 584 VVSWTAMITSYMRAGLFD---KVAGLLQ----------------------------EMVL 612
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
D + P F VTS L + L GK VH + ++ G+ + V N+L+ MY K +
Sbjct: 613 DGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEE 672
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ +FD + K+V ++WN++I GYS+N +
Sbjct: 673 ARLIFDRVTNKDV-------------------------------ISWNTLIGGYSRNNFP 701
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E+ +F++ML +P+ T+ L A A++ L+ G++IHAY +R F NA
Sbjct: 702 NESFSLFSDMLLQ--FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNA 759
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+ Y K G + +A+ + FD L ++++
Sbjct: 760 LVDMYVKCGALLVARVL---------------------------------FDRLTKKNLI 786
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+WT M+ GY +G K A+ LF M G +P+ + SA+L G++ +
Sbjct: 787 SWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAM 846
Query: 439 LRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ + L ++ + S+ G++ A + ++ W S++ H +
Sbjct: 847 QKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKL 906
Query: 498 AIQLFERMLELGIKPDHITY 517
A ++ +++ +L +P++ Y
Sbjct: 907 AEKVADKVFKL--EPENTGY 924
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 140/617 (22%), Positives = 245/617 (39%), Gaps = 146/617 (23%)
Query: 151 VLASCTALGDLSAGKKVHSFV-----VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
V+ C L A K+ H+ + TG G V + L+ Y K GD A+ VFDG
Sbjct: 103 VVQLCGEERSLEAAKRAHALIRASSAAATGGKGSV-LGKRLVLAYLKCGDLGEARTVFDG 161
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M + DV W S+++ Y++ G EA+ +F
Sbjct: 162 MPPQAA-----------------------------DVRVWTSLMSAYAKAGDFQEAVSLF 192
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M + + PD ++ L ++L L G+ IH + + V NALI+ Y++
Sbjct: 193 RQM-QCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSR 251
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A R+FDS+ RD ++W +M+
Sbjct: 252 CGRME---------------------------------DAARVFDSMHPRDAISWNSMIG 278
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
G NG + AV+LF M +G + ++ T+ ++L + L GK +H +++SG
Sbjct: 279 GCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLW 338
Query: 446 SL----------SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
L ++ + L+ MY K G++ +ARRVF+ + + W ++ A+ G
Sbjct: 339 GLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEF 398
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLT-----ACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
EE++ LF +M ELGI PD +L +C GLV G ++K +
Sbjct: 399 EESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGY----IVKLGFGAQCAV 454
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDL------ 600
+ +++ ++ ++ +A MP + D ++W S++S C + + ++L
Sbjct: 455 CN--ALISFYAKSNMIGDAVLVFNRMPRQ-DTISWNSVISGCSSNGLNSEAIELFIRMWT 511
Query: 601 --GKIAAEKLLLIEP------------------------DNSGAYSALCNLYSSCGKWED 634
++ + LL + P + +AL ++YS+C W+
Sbjct: 512 QGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQS 571
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
I +SM V SW + R +++K+A + E+ G
Sbjct: 572 TNQIFRSMGQKNV-----VSWTAMITSY-----------MRAGLFDKVAGLLQEMVLDGI 615
Query: 695 VPD---TASVLHDVEED 708
PD S LH D
Sbjct: 616 RPDVFAVTSALHAFAGD 632
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 273/761 (35%), Positives = 412/761 (54%), Gaps = 105/761 (13%)
Query: 31 VGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+G++VH +++ GL L + + N L+N YAK
Sbjct: 397 IGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKC---------------------------- 428
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G ++ A ++F LM D +SW TII ++ G + A+ + M Q + P+ F +
Sbjct: 429 ---GAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S L+SC L L+AG++VH VK GL +V+N L+ MY + G A+ D
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECG------AMSD----- 534
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EALGMFANM 268
W V F+ M E D V+WN+M+ + + E + +F NM
Sbjct: 535 ---YWKV-----------------FNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNM 574
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ L P+K T + L+A + L L+LGKQ+HA +++ V NALISCYAK G
Sbjct: 575 MR-GGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSG- 632
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAMLVGY 387
D+G +F ++ DR D ++W +M+ GY
Sbjct: 633 --------------------------------DMGSCEHLFTNMSDRRDAISWNSMISGY 660
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
NG ++A++ M+ G + T S +L+ +S+A+L+ G ++HA +RS S +
Sbjct: 661 IYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDV 720
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V +AL+ MYSK G ++ A ++FN + R E SW SMI A+HGLG +AI++FE ML
Sbjct: 721 VVESALVDMYSKCGRVDYASKLFNSMTQRNE-FSWNSMISGYARHGLGRKAIEIFEEMLR 779
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
PDH+T+V VL+AC+H GLVE+G Y+ MM + H I P H++ ++DLLGRAG +
Sbjct: 780 SRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKID 838
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHK---NLDLGKIAAEKLLLIEPDNSGAYSALCN 624
+ +I+ MP+EP+ + W ++L ACR K N+DLG+ A+ LL IEP N Y N
Sbjct: 839 KIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASN 898
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+++ G WED A R +M+ KK G SWV + + VH F D HP IY K+
Sbjct: 899 FHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNF 958
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ I+ G+VP T L+D+EE+ KE++L +HSEKLAIAF +++ + +RIMKNLRV
Sbjct: 959 LIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRV 1017
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH A ++I +++ R+I++RD+ RFHHFK G CSC DYW
Sbjct: 1018 CGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 245/531 (46%), Gaps = 79/531 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV--EMVQDQ 140
+ ++SA+A+ G D A ++F + +++V+ +IV + A+++FV D
Sbjct: 314 SALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDV 373
Query: 141 VLPTQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGDEMM 198
T + S LA + + L G+ VH +++TGL+ + V+N L+NMYAK G
Sbjct: 374 NADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIES 433
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE-RDVVTWNSMIAGYSQNGY 257
A +F Q++E D ++WN++I+ QNG
Sbjct: 434 ASKIF--------------------------------QLMEATDRISWNTIISALDQNGN 461
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EA+ M ++++ S + P F L S+LS+CA L+ L G+Q+H ++ D V N
Sbjct: 462 CEEAV-MHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSN 520
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
L+ Y + G + Y K+ F+S+ + D
Sbjct: 521 VLVKMYGECGA------------------------MSDYWKV---------FNSMAEHDE 547
Query: 378 VAWTAML--VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
V+W M+ + Q ++ + V++F +M+R G PN T +L+ S L+ L+ GKQ+H
Sbjct: 548 VSWNTMMGVMASSQTPIS-EIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVH 606
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A+ ++ G V NALI+ Y+K+G++ + +F + R++ +SW SMI +G
Sbjct: 607 AAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNL 666
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+EA+ M+ G D T+ +L AC +E+G + H ++ ++
Sbjct: 667 QEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSH-LESDVVVESA 725
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+VD+ + G + A +M + + +W S++S H LG+ A E
Sbjct: 726 LVDMYSKCGRVDYASKLFNSMT-QRNEFSWNSMISGYARH---GLGRKAIE 772
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 147/608 (24%), Positives = 253/608 (41%), Gaps = 127/608 (20%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-- 136
LC N ++++YAK RL A +VF+ MP R++VSWT ++ Y G + A R+F M
Sbjct: 98 LC--NHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLR 155
Query: 137 -VQDQVLPTQFTVTSVLASCTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSL------- 186
VQ PT FT ++L +C G L +VH V KT + V N+L
Sbjct: 156 EVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSC 215
Query: 187 --------------------------LNMYAKVGDEMMAKAVFDGMR------------- 207
+++YAK GD +F M+
Sbjct: 216 TVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEH 275
Query: 208 ------------------LKNVSSW-------------NVVVSLHIHSGRLDLARAQFDQ 236
L V W + +VS G D A+ F
Sbjct: 276 TFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLS 335
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL----E 292
+ +++ VT N +I G + + EA+ +F + D + + LSA A E
Sbjct: 336 LKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVV--LLSALAEYSISEE 393
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L++G+ +H +++RT G++ L + L
Sbjct: 394 GLRIGRVVHGHMLRT--------------------------------GLTDLKIAVSNGL 421
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
++ Y K G I A +IF + D ++W ++ +QNG ++AV + M + P+N
Sbjct: 422 VNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSN 481
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
+ L + LS + L L G+Q+H A++ G SVSN L+ MY + G ++ +VFN
Sbjct: 482 FALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNS 541
Query: 473 IHWRQETVSWTSMIVALAQHGLG-EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
+ E VSW +M+ +A E +++F M+ G+ P+ +T++ +L A + ++E
Sbjct: 542 MAEHDE-VSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLE 600
Query: 532 QG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
G Q + +MK H + +++ ++G + + NM D ++W S++S
Sbjct: 601 LGKQVHAAVMK--HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMIS 658
Query: 591 ACRVHKNL 598
+ NL
Sbjct: 659 GYIYNGNL 666
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 151/362 (41%), Gaps = 66/362 (18%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE---GP 408
L++ Y K + A ++FD + +R+ V+WT ++ GY +G+ ++A +FR+M+RE G
Sbjct: 102 LVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGC 161
Query: 409 KPNNYTLSAMLSVSSSLAS--LDHGKQIHASALRSGEASSLSVSNALITMYSKA--GNIN 464
+P ++T +L L Q+H ++ AS+ +V NALI+MY G
Sbjct: 162 RPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPI 221
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE----LGIKPDHIT---- 516
A+RVF+ R + ++W +++ A+ G LF+ M + ++P T
Sbjct: 222 LAQRVFDGTPIR-DLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSL 280
Query: 517 ------------------------------YVG--VLTACTHGGLVEQGQRYYNMMKNVH 544
YVG +++A GL ++ + + +K +
Sbjct: 281 ITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKN 340
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA--WGSLLSACRVH----KNL 598
+ ++ L R +EA DV A + LLSA + + L
Sbjct: 341 AVT-----LNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGL 395
Query: 599 DLGKIAAEKLLL--IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
+G++ +L + + L N+Y+ CG E A+ I + M + T SW
Sbjct: 396 RIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLM-----EATDRISWN 450
Query: 657 QI 658
I
Sbjct: 451 TI 452
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 270/786 (34%), Positives = 417/786 (53%), Gaps = 104/786 (13%)
Query: 3 TPNPPSLISPL-EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
+ NP + PL + +A +L+ LK P + +HA+II GL + FL NSLMN
Sbjct: 13 SSNPTQRLCPLAQSHASILRK-LKDLKPL--QQIHAQIITSGLTHNTFLSNSLMN----- 64
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
AY G L A ++F+ P ++ VSWT +I
Sbjct: 65 --------------------------AYVYCGLLADAKQIFHHTPCKNVVSWTILISGLA 98
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ F AI +F EM P T++SVL + LG + K VH F V+ G G V
Sbjct: 99 KNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVF 158
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V +L++MY+K G + +AR F+ M ER+
Sbjct: 159 VETALVDMYSKFG-------------------------------CMGVARQLFESMSERN 187
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
VV+WN++++GYS +G+ EA+ +F N+++ L D +T+ S + A ++ L++G IH
Sbjct: 188 VVSWNAIVSGYSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIH 246
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+IIRT ++ + T L+D Y+
Sbjct: 247 GFIIRTGYENDKHIK---------------------------------TALMDIYVSHNC 273
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLS 420
+ A R+F + +DV AWT ML G+ A++ F M+ + K ++ L +LS
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S +L G+++HA A+++ A+++ V +A+I MY+ GN+ A+R F + ++ V
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGM-GEKDVV 392
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNM 539
W +MI +G G +AI LF +M G+ PD T+V VL AC+H G+V +G Q +Y+M
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+K H I P H+A ++D+LGRAG L AY+FI NMP +PD + +LL ACR+H N+
Sbjct: 453 VKTSHDI-PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG ++K+ +EP+++G Y L N+Y+ G WE R S++ +KK GFS ++I
Sbjct: 512 LGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEIN 571
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+++ F + HPQ I + + +IK+ G+VP+T +L DV +D+K+ +L HHSE
Sbjct: 572 QEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSE 631
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
K+AIAFGL+ T T +RI KNLR CNDCHSA KF+ K+ R +V++DA RFH F+ G+C
Sbjct: 632 KMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVC 691
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 692 SCRDYW 697
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 375/647 (57%), Gaps = 72/647 (11%)
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++S N +V L++ G+L LAR FD M R+VV+WN ++AGY G E L +F NM+
Sbjct: 49 HISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMV 108
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR----------------------- 306
+ P+++ + LSAC++ ++K G Q H + +
Sbjct: 109 SLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHV 168
Query: 307 ---------------TEFDATGPVGNALISCYAKVGGVEIAQKIVEQ----SGISYLNVI 347
+ + V NAL+ VE+ +++V++ ++Y+ V+
Sbjct: 169 ELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVM 228
Query: 348 AF-----------------------------TTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
+ L+D Y K G++ AR +FD L++R+VV
Sbjct: 229 GLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVV 288
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
WTA++ Y QNG ++++ LF M REG PN YT + +L+ + +A+L HG +HA
Sbjct: 289 VWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARV 348
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
+ G + + V NALI MYSK+G+I+++ VF + +R + ++W +MI + HGLG++A
Sbjct: 349 EKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYR-DIITWNAMICGYSHHGLGKQA 407
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+Q+F+ M+ P+++T++GVL+A +H GLV++G Y N + KI+P H+ MV
Sbjct: 408 LQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVA 467
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LL RAGLL EA NF++ ++ DVVAW +LL+AC VH+N DLG+ AE +L ++P + G
Sbjct: 468 LLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGT 527
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y+ L N+Y+ +W+ IRK M+ +KK G SW+ I+N +HVF E HP+ I
Sbjct: 528 YTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQI 587
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y K+ ++ IK +G+VP+ ASVLHDVE++ KE L +HSEKLA+A+GL+ P +RI
Sbjct: 588 YKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRI 647
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLR+C+DCH+A+K I K+ +R I+VRDA RFHHF+ G C+C D+W
Sbjct: 648 IKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 206/481 (42%), Gaps = 100/481 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP---VKTLCSWNTILSA 88
G H + K GL ++K++L++ Y++ + A +V D +P V + S+N++L+A
Sbjct: 136 GMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNA 195
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
E GR + A+ + MV + V T
Sbjct: 196 LV-------------------------------ESGRGEEAVEVLRRMVDECVAWDHVTY 224
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
V+ C + DL G +VH+ +++ GL V + L++MY K G+ + A+ VFDG++
Sbjct: 225 VGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQN 284
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+N VV W +++ Y QNGY E+L +F M
Sbjct: 285 RN-------------------------------VVVWTALMTAYLQNGYFEESLNLFTCM 313
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ +L P+++T A L+ACA + L+ G +HA + + F V NALI+ Y+K G
Sbjct: 314 DREGTL-PNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGS 372
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ + +F + RD++ W AM+ GY
Sbjct: 373 ID---------------------------------SSYNVFTDMIYRDIITWNAMICGYS 399
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SL 447
+GL K A+++F+ MV PN T +LS S L + G +R+ + L
Sbjct: 400 HHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGL 459
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
++ + S+AG ++ A + + V+W +++ A H + ++ E +L+
Sbjct: 460 EHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQ 519
Query: 508 L 508
+
Sbjct: 520 M 520
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 213/473 (45%), Gaps = 70/473 (14%)
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS-FVVKTGLSGCVNVT--NSLLNMYAKV 193
V + LP+ + +L C + L GK +H+ F+++ S +++ NSL+++Y K
Sbjct: 4 VFSRYLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKC 63
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G +A+ +FD M L+NV SWNV ++AGY
Sbjct: 64 GQLGLARNLFDAMPLRNVVSWNV-------------------------------LMAGYL 92
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
G E L +F NM+ + P+++ + LSAC++ ++K G Q H + +
Sbjct: 93 HGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQ 152
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V +AL+ Y++ VE+A +++ D P +
Sbjct: 153 YVKSALVHMYSRCSHVELALQVL------------------------DTVPGEHV----- 183
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D+ ++ ++L ++G ++AVE+ R MV E ++ T ++ + + + L G +
Sbjct: 184 -NDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLR 242
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+HA LR G V + LI MY K G + AR VF+ + R V WT+++ A Q+G
Sbjct: 243 VHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRN-VVVWTALMTAYLQNG 301
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
EE++ LF M G P+ T+ +L AC + G + ++ + K
Sbjct: 302 YFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL-GFKNHVIVR 360
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+++++ ++G + +YN +M + D++ W +++ H LGK A +
Sbjct: 361 NALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYSHH---GLGKQALQ 409
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 163/383 (42%), Gaps = 67/383 (17%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ +G VHAR+++ GL F+ + L++ Y K + A+ VFD + + + W ++
Sbjct: 235 RDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALM 294
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+AY + G F+ ++ +F M ++ LP ++
Sbjct: 295 TAYLQN-------------------------------GYFEESLNLFTCMDREGTLPNEY 323
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +L +C + L G +H+ V K G V V N+L+NMY+K G + VF M
Sbjct: 324 TFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM 383
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+++ +W N+MI GYS +G +AL +F
Sbjct: 384 IYRDIITW-------------------------------NAMICGYSHHGLGKQALQVFQ 412
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNALISCYAK 325
+M+ P+ T LSA ++L +K G +++R + + +++ ++
Sbjct: 413 DMVSAEEC-PNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV--VAWTAM 383
G ++ A+ ++ + + + +V+A+ TLL+ + RRI +S+ D V +
Sbjct: 472 AGLLDEAENFMKTTQVKW-DVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTL 530
Query: 384 LVGYEQNGLNKDAVELFRSMVRE 406
L D V R ++RE
Sbjct: 531 LSNMYAKARRWDGVVTIRKLMRE 553
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 261/739 (35%), Positives = 398/739 (53%), Gaps = 76/739 (10%)
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
I+ + ++G +NA+ + M + L T+ T +SVL C L + GKKVHS + +
Sbjct: 73 ILHFCQLGDLENAMELIC-MCKKSELETK-TYSSVLQLCAGLKSFTDGKKVHSIIKSNSV 130
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH--------------- 221
+ L++ YA GD + VFD M KNV WN +VS +
Sbjct: 131 GVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 222 -----IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
I R + A FD++ +RDV++WNSMI+GY NG LG++ M+ +
Sbjct: 191 MVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGIDV 249
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D T+ S L CAN L LGK +H+ I++ F+ N L+ Y+K G ++ A ++
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVF 309
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVG------ 386
E+ G NV+++T+++ GY + G A ++ + DVVA T++L
Sbjct: 310 EKMGER--NVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGS 367
Query: 387 -----------------------------YEQNGLNKDAVELFRSMVREGP--------- 408
Y + G + A +F +MV +
Sbjct: 368 LDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE 427
Query: 409 -KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
KP++ T++ +L +SL++L+ GK+IH LR+G +S V+NAL+ +Y K G + AR
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+F++I ++ VSWT MI HG G EAI F M + GI+PD ++++ +L AC+H
Sbjct: 488 LLFDMIP-SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GL+EQG R++ +MKN I+P H+A MVDLL R G L +AY FIE +P+ PD WG+
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LL CR + +++L + AE++ +EP+NSG Y L N+Y+ KWE+ +R+ + G+
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
Query: 648 KKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+K G SW++I+ KV++F + HP I + + K+ ++KE G P T L + +
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINAD 726
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E KE L HSEKLA+AFGL++ P T+R+ KNLRVC DCH KF+ K REIV+R
Sbjct: 727 EMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLR 786
Query: 767 DATRFHHFKKGLCSCRDYW 785
D RFHHFK G CSCR +W
Sbjct: 787 DPNRFHHFKDGYCSCRGFW 805
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 176/679 (25%), Positives = 287/679 (42%), Gaps = 116/679 (17%)
Query: 16 YAHLLQ--SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
Y+ +LQ + LKS GK VH+ I + + L L++FYA + ++VFD
Sbjct: 102 YSSVLQLCAGLKSFTD--GKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDT 159
Query: 74 MPVKTLCSWNTILSAYAKQG--------------------RLDLACEVFNLMPNRDSVSW 113
M K + WN ++S YAK G R + A E+F+ + +RD +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISW 219
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
++I Y G + + ++ +M+ + T+ SVL C G LS GK VHS +K
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
+ +N +N+LL+MY+K GD A VF+ M +NV SW +++ + GR D A
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 234 FDQM----IERDVVTWNSMI-----AGYSQNGYDFE------------------------ 260
QM ++ DVV S++ +G NG D
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 261 ------ALGMFANM-LKD--------SSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
A +F+ M +KD LKPD T+A L ACA+L L+ GK+IH YI+
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R + + V NAL+ D Y+K G +G A
Sbjct: 460 RNGYSSDRHVANALV---------------------------------DLYVKCGVLGLA 486
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R +FD + +D+V+WT M+ GY +G +A+ F M G +P+ + ++L S
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546
Query: 426 ASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L+ G + + L ++ + S+ GN++ A + + W +
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++ + E A ++ ER+ EL +P++ Y VL A + E+ + + + +
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFEL--EPENSGYY-VLLANIYAE-AEKWEEVKRLREKIG 662
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
K + S +++ G+ L N + P ++ SLL R K + G
Sbjct: 663 KQGLRKNPGCSWIEIKGKVNLFVSGNN--SSHPHSKNI---ESLLKKMR-RKMKEEGHFP 716
Query: 605 AEKLLLIEPDNSGAYSALC 623
K LI D ALC
Sbjct: 717 KTKYALINADEMQKEMALC 735
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 119/279 (42%), Gaps = 61/279 (21%)
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
P R I D V + A ++ + Q G ++A+EL M ++ + T S++L + +
Sbjct: 58 PTRTI-----DHQVTDYNAKILHFCQLGDLENAMELI-CMCKKS-ELETKTYSSVLQLCA 110
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF------NLIHWR- 476
L S GK++H+ + ++ L++ Y+ G++ RRVF N+ W
Sbjct: 111 GLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNF 170
Query: 477 -------------------------------------------QETVSWTSMIVALAQHG 493
++ +SW SMI +G
Sbjct: 171 MVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNG 230
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSH 552
L E + ++++M+ LGI D T + VL C + G + G+ +++ +K+ + + S+
Sbjct: 231 LTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSN 290
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++D+ + G L A E M E +VV+W S+++
Sbjct: 291 --TLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAG 326
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/771 (33%), Positives = 396/771 (51%), Gaps = 101/771 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA + + R+ G+++H + + G + L ++++ Y K + A+KVFD MP
Sbjct: 122 YAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K WNT++S Y K + +VF + N T
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT------------------- 222
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
T+ +L + L +L G ++HS KTG V +++Y+K G
Sbjct: 223 -----------TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
M A+F R ++ ++N +MI GY+ N
Sbjct: 272 IKMGSALFREFRKPDIVAYN-------------------------------AMIHGYTSN 300
Query: 256 GYDFEALGMFAN-MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G +L +F ML + L+ TL S + + L L IH Y +++ F +
Sbjct: 301 GETELSLSLFKELMLSGARLRSS--TLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHAS 355
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V AL + Y+K+ +E AR++FD +
Sbjct: 356 VSTALTTVYSKLNEIE---------------------------------SARKLFDESPE 382
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+ + +W AM+ GY QNGL +DA+ LFR M + PN T++ +LS + L +L GK +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H + SS+ VS ALI MY+K G+I ARR+F+L+ + E V+W +MI HG
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE-VTWNTMISGYGLHGQ 501
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G+EA+ +F ML GI P +T++ VL AC+H GLV++G +N M + + +P+ H+A
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVD+LGRAG LQ A FIE M +EP W +LL ACR+HK+ +L + +EKL ++PD
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N G + L N++S+ + AA +R++ K + K G++ ++I HVF D HPQ
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
IY K+ K+ +++E G+ P+T LHDVEE+ +E M++ HSE+LAIAFGLI+T T
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 741
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLRVC DCH+ K I K+ +R IVVRDA RFHHFK G+CSC DYW
Sbjct: 742 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/603 (23%), Positives = 266/603 (44%), Gaps = 86/603 (14%)
Query: 51 KNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ----GRLDLACEVFNLMP 106
KN+ ++F+ ++ SIS+ + ++ + + ++L+ ++ G + A ++F +
Sbjct: 20 KNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQ 79
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGK 165
D + ++ ++ +++ +F + + L P T +++ + D AG+
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
+H V G + + ++++ MY K A+ VFD M K+ W
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW----------- 188
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
N+MI+GY +N E++ +F +++ +S + D TL L
Sbjct: 189 --------------------NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
A A L++L+LG QIH+ +T + V IS Y+K G
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK----------------- 271
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
IK+G +F R D+VA+ AM+ GY NG + ++ LF+ ++
Sbjct: 272 -----------IKMGSA-----LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G + + TL +++ VS L + IH L+S S SVS AL T+YSK I +
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
AR++F+ + SW +MI Q+GL E+AI LF M + P+ +T +L+AC
Sbjct: 373 ARKLFDE-SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
G + G+ ++++++ + + +++ + + G + EA + M + + V W
Sbjct: 432 QLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTW 489
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG----AYSALCNLY--SSCGKWEDAANIR 639
+++S +H G+ + E NSG + LC LY S G ++ I
Sbjct: 490 NTMISGYGLH-----GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 640 KSM 642
SM
Sbjct: 545 NSM 547
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
+PNP ++ L A L +L GK VH + S+++ +L+ YAK
Sbjct: 417 SPNPVTITCILSACAQLGALSL-------GKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
SI+ A+++FD M K +WNT++S Y
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLH------------------------------ 499
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVN 181
G+ + A+ +F EM+ + PT T VL +C+ G + G ++ +S + + G V
Sbjct: 500 -GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS-WNVVV-SLHIHSGRLDLARAQFDQMIE 239
++++ + G A + M ++ SS W ++ + IH +LAR +++ E
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT-NLARTVSEKLFE 617
Query: 240 RD 241
D
Sbjct: 618 LD 619
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/569 (40%), Positives = 351/569 (61%), Gaps = 36/569 (6%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++ L++ G LD AR D M ER+VV+W +MI+GYSQ+G EAL +F ML+ + K
Sbjct: 82 LIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLR-AGCKA 140
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
++FTLA+ L++C + ++ +Q+H+ +++T F++ VG
Sbjct: 141 NEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVG-------------------- 180
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++LLD Y K G+I AR++FD L +RD V+ TA++ GY Q GL+ +A
Sbjct: 181 -------------SSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEA 227
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++LFR + G + N T + +L+ S LASL++GKQ+H LR + + N+LI M
Sbjct: 228 LDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDM 287
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
YSK G + +RRVF+ + R +SW +M++ +HG+G+E +QLF M E +KPD +T
Sbjct: 288 YSKCGKLLYSRRVFDNMPQR-SAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVT 345
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+ VL+ C+HGGLV++G ++++ H+ ++DLLGR+G LQ+A + IE+M
Sbjct: 346 LLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHM 405
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P EP WGSLL ACRVH N+ +G++ A+KLL +EP N+G Y L N+Y++ G W+D
Sbjct: 406 PFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVF 465
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
+RK M V K SW+ + +H F + HP++ I K+ +++ ++K GFVP
Sbjct: 466 RVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVP 525
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
D + VLHDV+++ KE+ML HSEKLAI FGL++TP T+++MKNLR+C DCH+ KF+
Sbjct: 526 DLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVS 585
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+ REI +RD RFH K G C+C DYW
Sbjct: 586 KVYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 67/405 (16%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y + G LD A V + MP R+ VSWT +I Y++ GR A+ +F+ M++ +FT+
Sbjct: 86 YVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTL 145
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+VL SC + ++VHS VVKT + V +SLL+MY K G+ A+ V
Sbjct: 146 ATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKV------ 199
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
FD + ERD V+ ++I+GY+Q G D EAL +F
Sbjct: 200 -------------------------FDMLPERDTVSCTAIISGYAQLGLDDEALDLF-RQ 233
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L S ++ + T + L++ + L L GKQ+H I+R E + N+LI
Sbjct: 234 LYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLI-------- 285
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
D Y K G + +RR+FD++ R ++W AML+GY
Sbjct: 286 -------------------------DMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYG 320
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SL 447
++G+ ++ V+LFR+M E KP++ TL A+LS S +D G I ++ A +
Sbjct: 321 RHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHI 379
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+I + ++G + A + + + W S++ A H
Sbjct: 380 GHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVH 424
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 165/313 (52%), Gaps = 48/313 (15%)
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
+ ++AC + L G+Q+HA++++ + PV
Sbjct: 46 AAITACVERQALGEGRQVHAHMVKARYRP--PV--------------------------- 76
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
YL T L+ Y++ G + AR + D + +R+VV+WTAM+ GY Q+G + +A+ELF
Sbjct: 77 YLA----TRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIR 132
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M+R G K N +TL+ +L+ S+ +Q+H+ +++ S + V ++L+ MY K+GN
Sbjct: 133 MLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGN 192
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
I AR+VF+++ R +TVS T++I AQ GL +EA+ LF ++ G++ +++T+ +LT
Sbjct: 193 IQEARKVFDMLPER-DTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLT 251
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKI---KPTPSHFA---SMVDLLGRAGLLQEAYNFIENM 576
+ + G N K VH + K P S++D+ + G L + +NM
Sbjct: 252 SLS-------GLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNM 304
Query: 577 PLEPDVVAWGSLL 589
P + ++W ++L
Sbjct: 305 P-QRSAISWNAML 316
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 153/328 (46%), Gaps = 52/328 (15%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
LE + +L++ K+ N F V + C +H S+ + + KT S+
Sbjct: 127 LELFIRMLRAGCKA-NEFTLATV---LTSCPVHQSIQQVEQVHSLVVKTNFESH------ 176
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
+ +++L Y K G + A +VF+++P RD+VS T II Y ++G A+ +
Sbjct: 177 ------MFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDL 230
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
F ++ + T T++L S + L L+ GK+VH +++ L + + NSL++MY+K
Sbjct: 231 FRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSK 290
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G + ++ VFD M +R ++WN+M+ GY
Sbjct: 291 CGKLLYSRRVFDNMP-------------------------------QRSAISWNAMLMGY 319
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
++G E + +F M ++ +KPD TL + LS C++ + G I I++ E +A
Sbjct: 320 GRHGIGQEVVQLFRTMTEE--VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK-EQNAV 376
Query: 313 GPVGN--ALISCYAKVGGVEIAQKIVEQ 338
+G+ +I + G ++ A ++E
Sbjct: 377 IHIGHYGCVIDLLGRSGQLQKALDLIEH 404
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
S+ G + A ++ +L G+Q+HA +++ + ++ LI +Y + G
Sbjct: 31 SLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCG 90
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
++ AR V + + R VSWT+MI +Q G EA++LF RML G K + T VL
Sbjct: 91 ALDDARNVLDGMPERN-VVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVL 149
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF---ASMVDLLGRAGLLQEAYNFIENMPL 578
T+C ++Q ++ ++++ + SH +S++D+ G++G +QEA + +P
Sbjct: 150 TSCPVHQSIQQVEQVHSLVVKTN----FESHMFVGSSLLDMYGKSGNIQEARKVFDMLP- 204
Query: 579 EPDVVAWGSLLSA 591
E D V+ +++S
Sbjct: 205 ERDTVSCTAIISG 217
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/662 (37%), Positives = 380/662 (57%), Gaps = 42/662 (6%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
FL N+L++ YA+ S+ A++VFD MP + S+N +LSA A+ GR D A +F +P+
Sbjct: 50 TFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPD 109
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
D S+ ++ + GR +A+R M D + ++ S L++C + G++V
Sbjct: 110 PDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQV 169
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H+ V K+ V + +L++MYAK R
Sbjct: 170 HALVTKSSHGSDVYIGTALVDMYAKCE-------------------------------RP 198
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+ A+ FD M ER++V+WNS+I Y QNG EAL +F M+KD PD+ TLAS +SA
Sbjct: 199 EEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDG-FVPDEVTLASVMSA 257
Query: 288 CANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
CA L + G+Q+H +++++ F + NAL+ YAK G A+ + ++ I +V
Sbjct: 258 CAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIR--SV 315
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
++ T+++ GY K ++G A+ +F + +++VVAW ++ Y N ++A+ LF + RE
Sbjct: 316 VSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRE 375
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR------SGEASSLSVSNALITMYSKA 460
P +YT +L+ ++LA+L G+Q H L+ SG S + V N+L+ MY K
Sbjct: 376 SVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKT 435
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G+I+ +VF + R + VSW +MIV AQ+G ++A+ LFERML +PD +T +GV
Sbjct: 436 GSISDGAKVFERMAAR-DNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGV 494
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L+AC H GLV++G+RY+ M H I PT H+ M+DLLGRAG L+E IENMP+EP
Sbjct: 495 LSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEP 554
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
D V W SLL ACR+HKN+D+G+ AA KL ++PDNSG Y L N+Y+ GKW D +R+
Sbjct: 555 DAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRR 614
Query: 641 SMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTAS 700
SMK+ GV K G SW++I KV+VF D +HP R+ I++ + I ++ M + A
Sbjct: 615 SMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMSRMSIDAEIAD 674
Query: 701 VL 702
L
Sbjct: 675 DL 676
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 242/500 (48%), Gaps = 77/500 (15%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A L + + G+ VHA + K V++ +L++ YAK E A+KVFD MP
Sbjct: 150 FASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMP 209
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + SWN++++ Y + G +D A+ +FV
Sbjct: 210 ERNIVSWNSLITCYEQNGPVD-------------------------------EALALFVR 238
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVG 194
M++D +P + T+ SV+++C L G++VH+ +VK+ + + N+L++MYAK G
Sbjct: 239 MMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCG 298
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
AK VFD M +++V S +++ + S + A+A F QM+E++VV WN +IA Y+
Sbjct: 299 RTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAH 358
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD-ATG 313
N + EAL +F LK S+ P +T + L+ACANL L+LG+Q H ++++ F +G
Sbjct: 359 NSEEEEALRLFVR-LKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSG 417
Query: 314 P-----VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
P VGN+L+ Y K G + DG ++
Sbjct: 418 PESDVFVGNSLVDMYLKTGSIS-----------------------DGA----------KV 444
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+ + RD V+W AM+VGY QNG KDA+ LF M+ +P++ T+ +LS +
Sbjct: 445 FERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLV 504
Query: 429 DHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G++ S G + +I + +AG++ + + + V W S++
Sbjct: 505 KEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLG 564
Query: 488 ALAQH---GLGE-EAIQLFE 503
A H +GE A +LFE
Sbjct: 565 ACRLHKNIDMGEWAAGKLFE 584
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 217/450 (48%), Gaps = 71/450 (15%)
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
+G + N+LL+ YA++G A+ VFDGM +N S+N ++S GR D A A F
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+ + D ++N+++A +Q+G +AL A M D + + ++ AS LSACA+ + +
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVL-NAYSFASALSACASEKASR 164
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
G+Q+HA + ++ + +G AL+ YAK E AQK
Sbjct: 165 TGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQK--------------------- 203
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
+FD++ +R++V+W +++ YEQNG +A+ LF M+++G P+ TL
Sbjct: 204 ------------VFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTL 251
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIH 474
++++S + LA+ G+Q+H ++S + ++NAL+ MY+K G A+ VF+ +
Sbjct: 252 ASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMA 311
Query: 475 WR------------------------------QETVSWTSMIVALAQHGLGEEAIQLFER 504
R + V+W +I A + EEA++LF R
Sbjct: 312 IRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVR 371
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQR-YYNMMKNVHKIKPTPSHFA----SMVDL 559
+ + P H TY VL AC + ++ GQ+ + +++K + P S+VD+
Sbjct: 372 LKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDM 431
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ G + + E M D V+W +++
Sbjct: 432 YLKTGSISDGAKVFERMAAR-DNVSWNAMI 460
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 273/758 (36%), Positives = 394/758 (51%), Gaps = 104/758 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H +I++ G VF+ +L+N Y K S+ A W++
Sbjct: 124 GMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGA--------------WDS------- 162
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
F + +RD VSWT +I + +F A ++ M D V+P + T+ +V
Sbjct: 163 ----------FKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTV 212
Query: 152 LASCTALGD---LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
A GD LS GK V+ V + V V NS +NM+
Sbjct: 213 F---NAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFG----------------- 252
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++G L AR F+ M++RDVVTWN +I Y QN EA+ +F +
Sbjct: 253 --------------NAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+D +K + T L+ +L L GK IH + +D V AL+S Y +
Sbjct: 299 QQDG-VKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEA 357
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
G A +IF + +DV+ WT M V Y
Sbjct: 358 P---------------------------------GQAWKIFVDMGSKDVITWTVMCVAYA 384
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QNG K+A++LF+ M EG +P + TL A+L + LA+L G+QIH+ + + +
Sbjct: 385 QNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMV 444
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V ALI MY K G + A VF + +++ + W SM+ A AQHG +E +QLF +M
Sbjct: 445 VETALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFNQMQLD 503
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G+K D +++V VL+A +H G V G +Y+ M I PTP + +VDLLGRAG +QE
Sbjct: 504 GVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQE 563
Query: 569 AYNFIENMP-LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
A + + + PD + W +LL ACR H D K AAE++L +P +SGAY L N+Y+
Sbjct: 564 AVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYA 623
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G W+ +RK M+ GVKK G S ++I N+VH F D HP+R IY ++ +
Sbjct: 624 AAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNS 683
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E++ G++PDT +LHDVE++ KE ML +HSE+LAIAFGLISTP T LR++KNLRVC+D
Sbjct: 684 EMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSD 743
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+A K+I KL REI+VRD RFH+FK G CSC+DYW
Sbjct: 744 CHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 183/443 (41%), Gaps = 68/443 (15%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++L C++ ++ G++VH V G V L+ MYA+ G A+ V
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ + K+V +W ++ ++ G D A F QM E DV+
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVM------------------- 102
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
P K T + L+ACA+ E LK G +IH I++ F+ VG ALI+
Sbjct: 103 -------------PTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINM 149
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G V A F L RDVV+WTA
Sbjct: 150 YNKCGSVRGAWD---------------------------------SFKRLEHRDVVSWTA 176
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Q+ A L+R M +G PN TL + + L GK ++
Sbjct: 177 MIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV 236
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + V N+ + M+ AG + ARR+F + R + V+W +I Q+ EA++LF
Sbjct: 237 MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDR-DVVTWNIVITLYVQNENFGEAVRLF 295
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
R+ + G+K + IT+V +L T + +G+ + ++K + A M L GR
Sbjct: 296 GRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM-SLYGR 354
Query: 563 AGLLQEAYNFIENMPLEPDVVAW 585
+A+ +M DV+ W
Sbjct: 355 CEAPGQAWKIFVDMG-SKDVITW 376
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 36/316 (11%)
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
KPD + L C++ + + G+++H ++ F+ V LI YA+ G V AQ+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+F+ L +DV AWT M+ Y Q G
Sbjct: 61 ---------------------------------VFEILERKDVFAWTRMIGIYCQQGDYD 87
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
A+ +F M E P T A+L+ +S SL G +IH L+ G + V ALI
Sbjct: 88 RALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALI 147
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+K G++ A F + R + VSWT+MI A QH A L+ RM G+ P+
Sbjct: 148 NMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNK 206
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
IT V A + +G+ Y ++ + ++ S V++ G AGLL +A E
Sbjct: 207 ITLYTVFNAYGDPNYLSEGKFVYGLVSS-GVMESDVRVMNSAVNMFGNAGLLGDARRLFE 265
Query: 575 NMPLEPDVVAWGSLLS 590
+M ++ DVV W +++
Sbjct: 266 DM-VDRDVVTWNIVIT 280
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
KP+ A+L SS ++DHG+++H G + V LI MY++ G++ A++
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT--- 525
VF ++ R++ +WT MI Q G + A+ +F +M E + P +TYV +L AC
Sbjct: 61 VFEILE-RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 119
Query: 526 --------HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
HG +++QG + +++++ + G ++ A++ + +
Sbjct: 120 SLKDGMEIHGQILQQG------------FEGDVFVGTALINMYNKCGSVRGAWDSFKRLE 167
Query: 578 LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
DVV+W ++++AC H L + ++ L
Sbjct: 168 -HRDVVSWTAMIAACVQHDQFALARWLYRRMQL 199
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 4 PNPPSLISPLEFYAHL--LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
P +L++ L+ AHL LQ G+ +H+ II+ + + ++ +L+N Y K
Sbjct: 406 PTSATLVAVLDTCAHLAALQK---------GRQIHSHIIENRFRMEMVVETALINMYGKC 456
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTII 117
++ A VF++M + + WN++L AYA+ G D ++FN M D+VS+ +++
Sbjct: 457 GKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVL 516
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ G + + FV M+QD T T L C AG+ + + LS
Sbjct: 517 SALSHSGSVTDGYQYFVAMLQD----FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLS 572
Query: 178 GCV 180
GC+
Sbjct: 573 GCL 575
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 263/707 (37%), Positives = 392/707 (55%), Gaps = 68/707 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ AY+K G L A F + ++ SW ++ Y + G + A +F M V
Sbjct: 71 NVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVR 130
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+++ L +CTA +L+ G+K++ + L +V +SL+ MY + +
Sbjct: 131 PNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCRE------- 183
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
++ A FD+ E+DVV W +MI+ Y+ N AL
Sbjct: 184 ------------------------IEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRAL 219
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ M + +K T S L ACA+ L+ G H D + V
Sbjct: 220 ELVRRMDLEG-IKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTV------- 271
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
V G TL++ Y K G + ARR+ D++ R V+WTA
Sbjct: 272 ---VAG----------------------TLVNLYGKCGRVDDARRVLDAMPVRTSVSWTA 306
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y QNG +A+ LF+ M EG +P++ TL +++ + L +L GK+IHA S
Sbjct: 307 MIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSP 366
Query: 443 EAS-SLSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQ 500
S SL + NA+ITMY K GN+ AR VF + R + V+WT+MI A AQ+G+GEEAI+
Sbjct: 367 SFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIE 426
Query: 501 LFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF+ ML + G +P+ +T++ VL AC+H G +EQ ++ M + P H+ +VDL
Sbjct: 427 LFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDL 486
Query: 560 LGRAGLLQEAYNFI-ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LGRAG L EA + + E DVV W + LSAC+++ +L+ + AA+++ +EP+N
Sbjct: 487 LGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAG 546
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
L N+Y++ G+ D A IR MK GVKK G SW++I N+VH F V D HP++ I
Sbjct: 547 RVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEI 606
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
Y+++ ++ EIKE G+VPDT VL DV+E+ K Q+L +HSE+LA+A G+ISTP TTLR+
Sbjct: 607 YSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRV 666
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLRVC+DCH+A KFI ++V R+I+VRD +RFHHFK G+CSC DYW
Sbjct: 667 VKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 201/435 (46%), Gaps = 47/435 (10%)
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+N NV+V + G L A+ F ++ + +WN ++A Y+QNG+ A +F M
Sbjct: 65 RNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWM 124
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++P+ TL++ L AC L LG++++ I + V ++LI+ Y +
Sbjct: 125 CSQ-GVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCRE 183
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+E A+ R FD ++DVV WTAM+ Y
Sbjct: 184 IEEAE---------------------------------RAFDRSPEKDVVCWTAMISAYA 210
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EASSL 447
N A+EL R M EG K T ++L +S L +G H A G + SS
Sbjct: 211 HNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSST 270
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V+ L+ +Y K G ++ ARRV + + R +VSWT+MI A AQ+G EAI LF+ M
Sbjct: 271 VVAGTLVNLYGKCGRVDDARRVLDAMPVRT-SVSWTAMIAAYAQNGNAAEAINLFQCMDL 329
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G +P IT + V+ +C G + G+R + +++ + +++ + G+ G L+
Sbjct: 330 EGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLE 389
Query: 568 EAYNFIENMPLEP-DVVAWGSLLSACRVHKNLDLGKIAAE--KLLLI----EPDNSGAYS 620
A E +PL VV W +++ R + +G+ A E + +LI EP+ S
Sbjct: 390 LAREVFECVPLRTRSVVTWTAMI---RAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLS 446
Query: 621 ALCNLYSSCGKWEDA 635
LC S G+ E A
Sbjct: 447 VLCAC-SHLGQLEQA 460
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 167/405 (41%), Gaps = 70/405 (17%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVF 71
L Y LL + + + G H R GL S + +L+N Y K + A++V
Sbjct: 234 LPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVL 293
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
D MPV+T SW +++AYA+ G A E NL
Sbjct: 294 DAMPVRTSVSWTAMIAAYAQNGN---AAEAINL--------------------------- 323
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMY 190
F M + P+ T+ SV+ SC LG LS GK++H+ + + S + + N+++ MY
Sbjct: 324 -FQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMY 382
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
K G+ +A+ VF+ + L+ R VVTW +MI
Sbjct: 383 GKCGNLELAREVFECVPLRT-----------------------------RSVVTWTAMIR 413
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
Y+QNG EA+ +F ML D +P++ T S L AC++L +L+ + H + +F
Sbjct: 414 AYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE-HFCSMGPDF- 471
Query: 311 ATGPVGN---ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
P G+ L+ + G + A+K++ + +V+ + L GD+ ++R
Sbjct: 472 GVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQR 531
Query: 368 I---FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
L +V + Y G D + M G K
Sbjct: 532 AAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVK 576
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%)
Query: 328 GVEIAQKIVEQSGISYLNVIAF--TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G++ +K+ Q L+ F L+D Y K G + A+ F + + +W ++
Sbjct: 47 GLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMA 106
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Y QNG + A LF M +G +PN TLS L ++ +L G++++ L + EA
Sbjct: 107 AYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNE--LIASEAL 164
Query: 446 SLS--VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V ++LITMY + I A R F+ ++ V WT+MI A A + A++L
Sbjct: 165 EIDSHVESSLITMYGRCREIEEAERAFDRSP-EKDVVCWTAMISAYAHNWRTSRALELVR 223
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
RM GIK TYV +L AC + G ++ + + + ++V+L G+
Sbjct: 224 RMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKC 283
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G + +A ++ MP+ V+W ++++A
Sbjct: 284 GRVDDARRVLDAMPVRTS-VSWTAMIAA 310
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 42/253 (16%)
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
LD +++HA + + N L+ YSK G+++ A+ F I SW ++
Sbjct: 48 LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITL-HNAHSWNILMA 106
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A AQ+G A LF M G++P+ +T L ACT + G++ ++ + +
Sbjct: 107 AYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIAS--EAL 164
Query: 548 PTPSHF-ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG-------------------- 586
SH +S++ + GR ++EA + P E DVV W
Sbjct: 165 EIDSHVESSLITMYGRCREIEEAERAFDRSP-EKDVVCWTAMISAYAHNWRTSRALELVR 223
Query: 587 ---------------SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA--LCNLYSSC 629
SLL AC +L G ++ I D S A L NLY C
Sbjct: 224 RMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKC 283
Query: 630 GKWEDAANIRKSM 642
G+ +DA + +M
Sbjct: 284 GRVDDARRVLDAM 296
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/710 (34%), Positives = 415/710 (58%), Gaps = 41/710 (5%)
Query: 80 CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
C ++ G L A +F+ +P D +WT +I + + G K AI ++ ++
Sbjct: 12 CQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSR 71
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
V P +F + SV +C A GDL KK+H ++ G + + + N+L++M+ K A
Sbjct: 72 NVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGA 131
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ VFD M +K+V SW + +++ G M + ++ F
Sbjct: 132 RCVFDDMVVKDVVSWTSMTYCYVNCG-----------MCRQGILL--------------F 166
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+G+ + ++ + T++S L ACA+ +KLG+++H +I+R E + V +AL
Sbjct: 167 REMGL-------NGIRANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSAL 217
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV-- 377
++ YA G++ A+ + + + + +++++ +L Y + +F +R +
Sbjct: 218 VNMYASSLGLKQARLVFDS--MYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKL 275
Query: 378 --VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+W A + G QNG ++ A+ + M G KPN T+ + L ++L SL GK+IH
Sbjct: 276 NQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIH 335
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
R ++++ AL+ +Y+K G++ +R VFN + R++ V+W +MI+A + HG G
Sbjct: 336 GYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMP-RKDVVAWNTMIMANSMHGKG 394
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
E++ LF +ML+ G++P+ +T++GVL+ C+H L ++G +N M + H I P H++
Sbjct: 395 GESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSC 454
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVD+L RAG L+EAY+FI MP+EP AWG+LL ACRV+KN++LG +AA +L IEPDN
Sbjct: 455 MVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDN 514
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+G Y L N+ + KW +A+ IRK M+ G+ KT G SWVQ++NKV+ F D + Q+
Sbjct: 515 AGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQK 574
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
D IY + +I ++++ G+ P+T VL +V+++ +E+ L HSE+LA+AFG++++ TT
Sbjct: 575 DMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTT 634
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLR+C DCH+AIK I K+V +I+VRD+ RFHHF+ G C+C D+W
Sbjct: 635 VRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 207/443 (46%), Gaps = 76/443 (17%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
V K +H I+ G + + L N+L++ + K + ++ A+ VFD+M VK + S
Sbjct: 95 VAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVS--------- 145
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
WT++ Y G + I +F EM + + TV+S
Sbjct: 146 ----------------------WTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSS 183
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C + G++VH F+++ + G V V+++L+NMYA A+ VFD M ++
Sbjct: 184 ILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRD 241
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+ SWNV+++ + + + F QM I+ + +WN+ I+G QNG ALG+
Sbjct: 242 IVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILC 301
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M +DS +KP++ T+ S L C NLE L+ GK+IH Y+ R F + AL+ YAK
Sbjct: 302 KM-QDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKC 360
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +E+ +R +F+++ +DVVAW M++
Sbjct: 361 GDLEL---------------------------------SRHVFNTMPRKDVVAWNTMIMA 387
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+G +++ LF M+ G +PN+ T +LS S D G + S S E S
Sbjct: 388 NSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSM--SSEHSI 445
Query: 447 LSVSN---ALITMYSKAGNINAA 466
++ ++ + S+AG + A
Sbjct: 446 TPDADHYSCMVDVLSRAGRLEEA 468
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 262/741 (35%), Positives = 401/741 (54%), Gaps = 80/741 (10%)
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-- 174
I+ + ++G +NA+ + M Q L T+ T SVL C L + GKKVHS +
Sbjct: 73 ILHFCQLGDLENAMELIC-MCQKSELETK-TYGSVLQLCAGLKSFTDGKKVHSIIKSNSV 130
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH------------- 221
G+ G + + L++ YA GD + VFD M KNV WN +VS +
Sbjct: 131 GVDGALGL--KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLF 188
Query: 222 -------IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
I R + A FD++ +RDV++WNSMI+GY NG LG++ M+ +
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGI 247
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
D T+ S L CAN L LGK +H+ I++ F+ N L+ Y+K G ++ A +
Sbjct: 248 DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALR 307
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVG---- 386
+ E+ G NV+++T+++ GY + G A ++ + DVVA T++L
Sbjct: 308 VFEKMGER--NVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARS 365
Query: 387 -------------------------------YEQNGLNKDAVELFRSMVREGP------- 408
Y + G + A +F +MV +
Sbjct: 366 GSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI 425
Query: 409 ---KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
KP++ T++ +L +SL++L+ GK+IH LR+G +S V+NAL+ +Y K G +
Sbjct: 426 GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 485
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
AR +F++I ++ VSWT MI HG G EAI F M + GI+PD ++++ +L AC+
Sbjct: 486 ARLLFDMIP-SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
H GL+EQG R++ +MKN I+P H+A MVDLL R G L +AY F+E +P+ PD W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIW 604
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
G+LL CR + +++L + AE++ +EP+N+G Y L N+Y+ KWE+ +R+ +
Sbjct: 605 GALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQ 664
Query: 646 GVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
G++K G SW++I+ KV++F + HP I + + K+ ++KE G P T L +
Sbjct: 665 GLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALIN 724
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+E KE L HSEKLA+AFGL++ P T+R+ KNLRVC DCH KF+ K REIV
Sbjct: 725 ADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIV 784
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
+RD+ RFHHFK G CSCR +W
Sbjct: 785 LRDSNRFHHFKDGYCSCRGFW 805
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 176/679 (25%), Positives = 283/679 (41%), Gaps = 116/679 (17%)
Query: 16 YAHLLQ--SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
Y +LQ + LKS GK VH+ I + + L L++FYA + ++VFD
Sbjct: 102 YGSVLQLCAGLKSFTD--GKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDT 159
Query: 74 MPVKTLCSWNTILSAYAKQG--------------------RLDLACEVFNLMPNRDSVSW 113
M K + WN ++S YAK G R + A E+F+ + +RD +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISW 219
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
++I Y G + + ++ +M+ + T+ SVL C G LS GK VHS +K
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
+ +N +N+LL+MY+K GD A VF+ M +NV SW +++ + GR D A
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKL 339
Query: 234 FDQM----IERDVVTWNSMI-----AGYSQNGYDFE------------------------ 260
QM ++ DVV S++ +G NG D
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAK 399
Query: 261 ------ALGMFANM-LKD--------SSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
A +F+ M +KD LKPD T+A L ACA+L L+ GK+IH YI+
Sbjct: 400 CGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYIL 459
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R + + V NAL+ D Y+K G +G A
Sbjct: 460 RNGYSSDRHVANALV---------------------------------DLYVKCGVLGLA 486
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R +FD + +D+V+WT M+ GY +G +A+ F M G +P+ + ++L S
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546
Query: 426 ASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L+ G + + L ++ + S+ GN++ A + + W +
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGA 606
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++ + E A ++ ER+ EL +P++ Y VL A + E+ + + + +
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFEL--EPENTGYY-VLLANIYAE-AEKWEEVKRLREKIG 662
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
K + S +++ G+ L N P SLL R K + G
Sbjct: 663 KQGLRKNPGCSWIEIKGKVNLFVSGNN-----SSHPHSKNIESLLKKMR-RKMKEEGHFP 716
Query: 605 AEKLLLIEPDNSGAYSALC 623
K LI D ALC
Sbjct: 717 KTKYALINADEMQKEMALC 735
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 199/429 (46%), Gaps = 41/429 (9%)
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+ I+ V +N+ I + Q G D E M + S L+ T S L CA L+
Sbjct: 60 RTIDHQVTDYNAKILHFCQLG-DLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFT 116
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
GK++H+ I G +G L+S YA G ++ +++ + + NV + ++
Sbjct: 117 DGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDT--MEKKNVYLWNFMVSE 174
Query: 356 YIKIGDIG--------------------PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
Y KIGD A +FD L DRDV++W +M+ GY NGL +
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
+ +++ M+ G + T+ ++L ++ +L GK +H+ A++S ++ SN L+
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK G+++ A RVF + R VSWTSMI + G + AI+L ++M + G+K D +
Sbjct: 295 MYSKCGDLDGALRVFEKMGERN-VVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
+L AC G ++ G+ ++ +K + ++ +++D+ + G ++ A +
Sbjct: 354 AITSILHACARSGSLDNGKDVHDYIK-ANNMESNLFVCNALMDMYAKCGSMEAANSVFST 412
Query: 576 M-------------PLEPDVVAWGSLLSACRVHKNLDLGK-IAAEKLLLIEPDNSGAYSA 621
M L+PD +L AC L+ GK I L + +A
Sbjct: 413 MVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANA 472
Query: 622 LCNLYSSCG 630
L +LY CG
Sbjct: 473 LVDLYVKCG 481
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 273/811 (33%), Positives = 420/811 (51%), Gaps = 123/811 (15%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRN---PFV------------GKLVHARIIKCGLHL 46
+ +P + L Y +L+ + N PF G+ +H I GL
Sbjct: 99 SSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQA 158
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
+F+ +L++ Y VK C L A +F MP
Sbjct: 159 DLFVSTALLDMY-----------------VKCAC--------------LPDAAHIFATMP 187
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIR--MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
RD V+W ++ Y G + +A+ + ++M ++ P T+ ++L G L+ G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247
Query: 165 KKVHSFVV----------KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
VH++ + K+ L+ V + +LL+MYAK G + A+ VF
Sbjct: 248 TSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVF----------- 296
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
D M R+ VTW+++I G+ +A +F ML
Sbjct: 297 --------------------DAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 336
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
++AS L ACA+L+ L++G+Q+HA + ++ A GN+L+S YA
Sbjct: 337 FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA---------- 386
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
K G I A +FD + +D V+++A++ GY QNG +
Sbjct: 387 -----------------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A +F+ M +P+ T+ +++ S LA+L HG+ H S + G AS S+ NALI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+K G I+ +R+VFN++ R + VSW +MI HGLG+EA LF M LG PD
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+T++ +L+AC+H GLV +G+ ++++M++ + + P H+ MVDLL R G L EAY FI+
Sbjct: 543 VTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQ 602
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
+MPL DV W +LL ACRV+KN+DLGK + + + P+ +G + L N+YS+ G++++
Sbjct: 603 SMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDE 662
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
AA +R K G KK+ G SW++I +H F D HPQ IY ++ I IK++G+
Sbjct: 663 AAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
PDT+ VL D+EE+ KE+ L HSEKLAIA+G++S E+ T+ + KNLRVC DCH+ IK
Sbjct: 723 QPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKH 782
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I L R I+VRDA RFHHFK G CSC D+W
Sbjct: 783 ISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 250/534 (46%), Gaps = 76/534 (14%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA--IRMFVEMVQDQVLPTQFTVTS 150
G L A +F+ +P+ D ++ +I Y+ A + ++ M++ +V P +T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L +C+AL D G+ +H + GL + V+ +LL+MY K A +F M ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM-L 269
+ +W N+M+AGY+ +G A+ +M +
Sbjct: 191 LVAW-------------------------------NAMLAGYAHHGMYHHAVAHLLSMQM 219
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ L+P+ TL + L A L G +HAY IR + + L
Sbjct: 220 QMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTD-------- 271
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
V+ T LLD Y K G + ARR+FD++ R+ V W+A++ G+
Sbjct: 272 ---------------GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL---ASLDH---GKQIHASALRSGE 443
A LF++M+ +G + S++S+L ASLDH G+Q+HA +SG
Sbjct: 317 CSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGV 371
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ L+ N+L++MY+KAG I+ A +F+ + + +TVS+++++ Q+G EEA +F+
Sbjct: 372 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M ++PD T V ++ AC+H ++ G+ + + + + S +++D+ +
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKC 489
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
G + + MP D+V+W ++++ +H LGK A L +E +N G
Sbjct: 490 GRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIH---GLGKEATA--LFLEMNNLG 537
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 15/247 (6%)
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK--DAVELFRSMVREGPKPNNY 413
+I G + A +FD + DV + ++ Y + D + L+R M+R PNNY
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T L S+LA G+ IH A+ +G + L VS AL+ MY K + A +F +
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAI-QLFERMLELG-IKPDHITYVGVLTACTHGGLVE 531
R + V+W +M+ A HG+ A+ L +++ ++P+ T V +L G +
Sbjct: 187 PAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 532 QGQ--RYYNMMKNVHKIKPTPSHF-------ASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
QG Y + +H + + S +++D+ + G L A + MP +V
Sbjct: 246 QGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305
Query: 583 VAWGSLL 589
W +L+
Sbjct: 306 T-WSALI 311
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 258/722 (35%), Positives = 390/722 (54%), Gaps = 66/722 (9%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+D+V W + E + AI +F EM Q + +P + G+ V
Sbjct: 119 KDAVLWNKHVAMLAEAEEWDEAIAVFREM-QARGVPRR-----------------RGRAV 160
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS----LHIH 223
H++ +K L V L MYA+ D A V D M +V WN VV+ L +
Sbjct: 161 HAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLV 220
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
L+LA E +V TWN++++G S++G D EALG+ A+MLK L+PD T++S
Sbjct: 221 DDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK-QGLRPDATTVSS 279
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L + AN L+ G +IH + +R + + G AL+ YAK G ++ AQK+ + + +
Sbjct: 280 LLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFD--ALEH 337
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLNKDAVEL 399
N+ + +L+ GY G A + + ++ D D+ W ++ GY NG + AV L
Sbjct: 338 RNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLL 397
Query: 400 FRS-----------------------------------MVREGPKPNNYTLSAMLSVSSS 424
R M ++G +P+ T+S +L +
Sbjct: 398 LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAG 457
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
LA GK++H ALR + VS ALI MYSK G++ +A+ +F I ++ V +
Sbjct: 458 LALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQ-QKNLVLCNA 516
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
M+ LA HG G EAI+LF M G+KPD IT+ +LTAC GLV +G Y++ M+ +
Sbjct: 517 MLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKY 576
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+KPT ++A MVDLL R G L EA +FIE P++P WG+LL+ C +H NL L ++A
Sbjct: 577 GVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVA 636
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
A L +EP NS Y + NLY +++A +++ +MK GV G+SW+QI+ +HV
Sbjct: 637 ARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHV 696
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F V+ HP+ IY ++ ++ +IK+ G+VPDT+ + ++V+E+ KE++L H+EKLAI
Sbjct: 697 FEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAIT 756
Query: 725 FGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+GLI S +R+MKN R+CNDCH K I L DR+I++RDA RFHHF G CSC D
Sbjct: 757 YGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCND 816
Query: 784 YW 785
YW
Sbjct: 817 YW 818
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/541 (24%), Positives = 236/541 (43%), Gaps = 110/541 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +K L + L YA+ ++ A +V D M ++ WN +++ A+
Sbjct: 157 GRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCAR 216
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G +D A E+ M P + +W T++ + GR + A+ + M++ + P T
Sbjct: 217 LGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATT 276
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
V+S+L S G L G ++H F ++ L V +L++MYAK G A+ VFD +
Sbjct: 277 VSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALE 336
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALG 263
+N+++WN +V+ + ++GR D+A + M ++ D+ TWN +I GYS NG +A+
Sbjct: 337 HRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVL 396
Query: 264 M----------------------------------FANMLKDSSLKPDKFTLASTLSACA 289
+ F + ++ ++P T++ L ACA
Sbjct: 397 LLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACA 456
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L K GK++H + +R +D V ALI Y+K GG ++ K+
Sbjct: 457 GLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSK-GGSLVSAKV-------------- 501
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
IF+S++ +++V AML G +G ++A+ELF M G K
Sbjct: 502 ------------------IFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLK 543
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P++ T +A+L+ S+ + G + + + T Y
Sbjct: 544 PDSITFTALLTACRSMGLVTEGWEYF---------------DGMETKYGV---------- 578
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-HGG 528
+ T ++ M+ LA+ G +EA+ ER I P + +LT C+ HG
Sbjct: 579 ------KPTTENYACMVDLLARCGYLDEAMDFIERS---PIDPGASHWGALLTGCSIHGN 629
Query: 529 L 529
L
Sbjct: 630 L 630
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/754 (35%), Positives = 399/754 (52%), Gaps = 101/754 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HAR+I H V L N+L++FYA K
Sbjct: 30 GKALHARLITAA-HFDVVLHNNLISFYA-------------------------------K 57
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR+ LA VF+ MP R++VS ++ Y GR K ++++ V D + ++ +++
Sbjct: 58 CGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLL--RVVDFGM-NEYVLSAA 114
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++ + G++ H + VK G + V N++L MY + A VF+ +V
Sbjct: 115 VSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFE-----SV 169
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S + D +NSMI GY G +LG+ NM +
Sbjct: 170 SGF--------------------------DAFAFNSMINGYLDRGQLDGSLGIVRNMTGE 203
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ K D + + L CA+++ LG Q+HA ++ +
Sbjct: 204 AE-KWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLE--------------------- 241
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
LNV + L+D Y K + A R F+ L +++VV+WTA++ Y QN
Sbjct: 242 ------------LNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNE 289
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L +DA++LF M EG +PN +T + L+ + LA+L G + A +++G L VSN
Sbjct: 290 LYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSN 349
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ MYSK+G+I A RVF + R + VSW +I A HGL E ++ F ML +
Sbjct: 350 ALMNMYSKSGSIEDAHRVFISMPLR-DVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVI 408
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P ++T+VGVL+AC GLV++ Y N M I P H+ MV LL R G L EA
Sbjct: 409 PSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAER 468
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI N + DVVAW SLL++C+V+KN LG AE++L +EP + G Y L N+Y+ +
Sbjct: 469 FIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANR 528
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+ +RK M+ V+K+ G SW+ + + VHVF E+ +HPQ D I K+ ++ D+IK
Sbjct: 529 WDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKA 588
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+VP+ A VLHD++++ KE+ L +HSEKLA+AFGLI TP+ T+ IMKNLR+C+DCH A
Sbjct: 589 IGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVA 648
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK I + R+IVVRDA RFH + G+CSC DYW
Sbjct: 649 IKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L ++ +G VHA+ +K L L+V++ ++L++ Y K + + A + F+ +P
Sbjct: 212 YVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLP 271
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW +++AY T NE+ +++A+++F++
Sbjct: 272 EKNVVSWTAVMTAY-----------------------------TQNEL--YEDALQLFLD 300
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V P +FT L SC L L G + + V+KTG + V+N+L+NMY+K G
Sbjct: 301 MEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGS 360
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAG 251
A VF M L++V SWN++++ + H G F M+ V VT+ +++
Sbjct: 361 IEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSA 420
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDK 278
+Q G EA M+K+ + P K
Sbjct: 421 CAQLGLVDEAFYYLNTMMKEVGITPGK 447
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF YA L S G + A ++K G + + N+LMN Y+K+ SI A
Sbjct: 306 VQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAH 365
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIG 124
+VF MP++ + SWN I++ YA G E F+ M + V++ ++ ++G
Sbjct: 366 RVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLG 425
Query: 125 RFKNAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
A M+++ + P + T ++ +G L ++ F+V + V
Sbjct: 426 LVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAER---FIVNNCIGTDVVAW 482
Query: 184 NSLLN 188
SLLN
Sbjct: 483 RSLLN 487
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 271/826 (32%), Positives = 439/826 (53%), Gaps = 111/826 (13%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK-TLCSWNTILSAYAKQGRL 95
AR++K G + + N L++ + ++ A+ +FD+MP + S N +LS Y++ G+L
Sbjct: 23 ARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQL 82
Query: 96 DLACEVFNLMPN--RDSVSWTTIIVTYNEI--GRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
A +F P RD+V+WT +I + R +A+ +F +M+++ V P + TV +V
Sbjct: 83 SAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATV 142
Query: 152 LASCTALGDLSAG---KKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
L A G +A +H F +K G L V V N+LL+ Y K
Sbjct: 143 LNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCK--------------- 187
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
G L AR F +M RD VT+N+M+ G S+ G EAL +FA
Sbjct: 188 ----------------HGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAA 231
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + L +FT ++ L+ + L LG+Q+H + R + V N+L+ Y+K
Sbjct: 232 M-RRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCD 289
Query: 328 GVEIAQKI----VEQSGISYLNVIA-----------------------------FTTLLD 354
++ +K+ +E+ +SY +IA + +LL
Sbjct: 290 CLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLS 349
Query: 355 -----GYIKIGDIGPARRIFDSLRDRDVV--------AWTAMLVGYEQNGLNK------- 394
+I IG A+ + L D+V + ML + N +NK
Sbjct: 350 VAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVS 409
Query: 395 ---------------DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
+A++LF M R G P+ T S+ + SS+LA + G+Q+H+ +
Sbjct: 410 WTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLI 469
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
RSG SS+ +AL+ MY+K G ++ A + F+ + R ++SW ++I A A +G + AI
Sbjct: 470 RSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERN-SISWNAVISAYAHYGQAKNAI 528
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
++FE ML G KPD +T++ VL+AC+H GL E+ +Y+ +M+ + I P H++ ++D
Sbjct: 529 KMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDT 588
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGR G + + MP E D + W S+L +CR H N DL ++AAEKL + ++ Y
Sbjct: 589 LGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPY 648
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+++ GKWEDAA ++K M+ G++K G+SWV++++KV+ F D +P I
Sbjct: 649 VILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIK 708
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+++ +++ E+ + G+ PDT+ L V++D+K + L++HSE+LAIAF LI+TP T +R+M
Sbjct: 709 DELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVM 768
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNL C DCHSAIK + K+V+R+I+VRD++RFHHFK G CSC DYW
Sbjct: 769 KNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/697 (36%), Positives = 386/697 (55%), Gaps = 69/697 (9%)
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD T+C N +L +Y + RLDLAC +F + ++DSV++ T+I Y + G + AI
Sbjct: 172 FDTNLFLTVC--NVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAI 229
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+F++M Q P+ FT + VL + L D + G+++H V TG S +V N +L+ Y
Sbjct: 230 HLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFY 289
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K H L+ R F++M E D V++N +I+
Sbjct: 290 SK------------------------------HDRVLE-TRNLFNEMPELDFVSYNVVIS 318
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
YSQ E+L +F M + F A+ LS ANL L++G+Q+H I D
Sbjct: 319 SYSQAEQYEESLNLFREM-QCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATAD 377
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ VGN+L+ YAK + D A IF
Sbjct: 378 SILHVGNSLVDMYAKC------------------------EMFD---------EAELIFK 404
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
SL R V+WTA++ GY Q GL+ ++LF M + + T + +L S+ ASL
Sbjct: 405 SLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLL 464
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GKQ+HA +RSG ++ + L+ MY+K G+I A +VF + R VSW ++I A A
Sbjct: 465 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN-AVSWNALISAYA 523
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
+G GE AI F +M++ G++PD ++ +GVL AC+H G VEQG ++ M ++ I P
Sbjct: 524 DNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKK 583
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+A M+DLLGR G EA ++ MP EPD + W S+L+ACR++KN L + AAE+L
Sbjct: 584 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFS 643
Query: 611 IEP-DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+E ++ AY ++ N+Y++ GKWE+ +++K+M+ G+KK +SWV++ +K+HVF D
Sbjct: 644 MEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 703
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP D I K+ ++ EI+ G+ PDT+SV+ D++E +K + L++HSE+LA+AF LIS
Sbjct: 704 QTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALIS 763
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
TPE + +MKNLR C DCH+AIK I K+V R I +
Sbjct: 764 TPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/671 (26%), Positives = 305/671 (45%), Gaps = 83/671 (12%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P + V ARIIK G + N + + +S A KV+DEMP K S NT++S
Sbjct: 25 PPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISG 84
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y K G L A +F+ MP+R V+WT ++ Y F A ++F +M + LP T
Sbjct: 85 YVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTF 144
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
T++L C +A +VH+F VK G TN L +
Sbjct: 145 TTLLPGCNDAVPQNAVGQVHAFAVKLGFD-----TNLFLTV------------------- 180
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
NV++ + RLDLA F++++++D VT+N++I GY ++G EA+ +F M
Sbjct: 181 -----CNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKM 235
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ S KP FT + L A L LG+Q+H + T F VGN ++ Y+K
Sbjct: 236 -RQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSK--- 291
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+++E R +F+ + + D V++ ++ Y
Sbjct: 292 ---HDRVLE---------------------------TRNLFNEMPELDFVSYNVVISSYS 321
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q ++++ LFR M G N+ + MLS++++L+SL G+Q+H A+ + S L
Sbjct: 322 QAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILH 381
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V N+L+ MY+K + A +F + R TVSWT++I Q GL ++LF +M
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQR-STVSWTALISGYVQKGLHGAGLKLFTKMRGA 440
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
++ D T+ VL A + G++ + + ++ S + +VD+ + G +++
Sbjct: 441 NLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKD 499
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSALCNLY 626
A E MP + + V+W +L+SA + + + A K++ ++PD+ L
Sbjct: 500 AVQVFEEMP-DRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIAC- 557
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
S CG E ++M + + K H + D L R+ + + K+
Sbjct: 558 SHCGFVEQGTEFFQAMSPI---------YGITPKKKHYACMLDLL--GRNGRFAEAEKLM 606
Query: 687 DEIKEMGFVPD 697
D EM F PD
Sbjct: 607 D---EMPFEPD 614
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 119/296 (40%), Gaps = 73/296 (24%)
Query: 20 LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTL 79
+ +NL S VG+ VH + I + + NSL++ YAK E A+ +F + ++
Sbjct: 354 IAANLSSLQ--VGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRST 411
Query: 80 CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
SW ++S Y ++ G +++F +M
Sbjct: 412 VSWTALISGYVQK-------------------------------GLHGAGLKLFTKMRGA 440
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
+ Q T +VL + L GK++H+F++++G V + L++MYAK G A
Sbjct: 441 NLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 500
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
VF+ M +N SWN ++S Y+ NG
Sbjct: 501 VQVFEEMPDRNAVSWNALIS-------------------------------AYADNGDGE 529
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
A+G F M++ S L+PD ++ L AC++ ++ G + F A P+
Sbjct: 530 AAIGAFTKMIQ-SGLQPDSVSILGVLIACSHCGFVEQGTEF--------FQAMSPI 576
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L+++ + +GK +HA II+ G +VF + L++ YAK SI A +VF+EMP
Sbjct: 449 FATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 508
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIR 131
+ SWN ++SAYA G + A F M DSVS +++ + G +
Sbjct: 509 DRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTE 568
Query: 132 MFVEM 136
F M
Sbjct: 569 FFQAM 573
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/579 (41%), Positives = 358/579 (61%), Gaps = 16/579 (2%)
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD--FEALGMFANMLKDSSLKPDKF 279
+H LD A F+QM +R+ +WN++I G+S++ D A+ +F M+ D ++P++F
Sbjct: 63 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRF 122
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA-----QK 334
T S L ACA K++ GKQIH ++ F V + L+ Y G ++ A +
Sbjct: 123 TFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKN 182
Query: 335 IVEQSGISYLN-------VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
I+E+ + ++ V+ + ++DGY+++GD AR +FD +R R VV+W M+ GY
Sbjct: 183 IIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 242
Query: 388 EQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
QNG KDAVE+FR M + E +PN TL ++L S L SL+ G+ +H A SG
Sbjct: 243 SQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRID 302
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ +ALI MYSK G I A VF + R+ ++W++MI A HG +AI F +M
Sbjct: 303 DVLGSALIDMYSKCGIIEKAIMVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMR 361
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G++P + Y+ +LTAC+H GLVE+G+RY++ M +V ++P H+ MVDLLGR GLL
Sbjct: 362 QAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLL 421
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EA FI NMP++PD V W +LL ACR+H+N+++GK A L+ + P +SGAY AL N+Y
Sbjct: 422 DEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMY 481
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+S G W + + +R MK + ++K G SW+ I +H F VED HP+ I + + +I
Sbjct: 482 ASQGNWSEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEIS 541
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
D+++ G+ P T VL ++EE+ KE L +HSEK+A AFGLIST +RI+KNLR+C
Sbjct: 542 DKLRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICE 601
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHS+IK I K+ R+I VRD RFHHF+ G CSC DYW
Sbjct: 602 DCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 211/443 (47%), Gaps = 29/443 (6%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN--AIRMFVEMVQDQVL-PTQFTVTSV 151
LD A ++FN MP R+ SW TII ++E K AI +F EM+ D+ + P +FT SV
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG--------------DEM 197
L +C G + GK++H +K G G V ++L+ MY G +
Sbjct: 128 LKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIERE 187
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
M + R V WNV++ ++ G AR FD+M +R VV+WN+MI+GYSQNG+
Sbjct: 188 MVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGF 247
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+A+ +F M K ++P+ TL S L A + L L+LG+ +H Y + +G+
Sbjct: 248 FKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGS 307
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
ALI Y+K G +E A + E+ + NVI ++ +++G+ G G A F +R V
Sbjct: 308 ALIDMYSKCGIIEKAIMVFER--LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 365
Query: 378 ----VAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGK 432
VA+ +L GL ++ F MV +G +P M+ + L LD +
Sbjct: 366 RPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAE 425
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI--HWRQETVSWTSMIVALA 490
+ L + AL+ N+ +RV N++ ++ ++ ++ A
Sbjct: 426 EF---ILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYA 482
Query: 491 QHGLGEEAIQLFERMLELGIKPD 513
G E ++ RM E+ I+ D
Sbjct: 483 SQGNWSEVSEMRLRMKEMDIRKD 505
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 146/316 (46%), Gaps = 48/316 (15%)
Query: 9 LISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA-----KTE 62
I P F + +L++ K+ GK +H +K G F+ ++L+ Y K
Sbjct: 116 FIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDA 175
Query: 63 SISYAKKVFDEMPVKTL---------CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+ + K + + V + WN ++ Y + G A +F+ M R VSW
Sbjct: 176 CVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSW 235
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
T+I Y++ G FK+A+ +F EM + + + P T+ SVL + + LG L G+ +H +
Sbjct: 236 NTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAE 295
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
+G+ + ++L++MY+K G ++ KA+
Sbjct: 296 DSGIRIDDVLGSALIDMYSKCG--IIEKAIM----------------------------- 324
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
F+++ +V+TW++MI G++ +G +A+ F M + + ++P + L+AC++
Sbjct: 325 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVAYINLLTACSHAG 383
Query: 293 KLKLGKQIHAYIIRTE 308
++ G++ + ++ +
Sbjct: 384 LVEEGRRYFSQMVSVD 399
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/642 (38%), Positives = 358/642 (55%), Gaps = 67/642 (10%)
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
T + TS+L SC L+ GK++H+ G++ ++ L+++YA
Sbjct: 46 THYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAV----------- 94
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
S L AR FD++ ++++ WN +I GY+ NG A+
Sbjct: 95 --------------------SNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAII 134
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
++ ML D L+PD FTL L AC+ L + G+ IH Y+I++ ++ VG ALI Y
Sbjct: 135 LYHKML-DYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMY 193
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G + A R+FD + RD V W +M
Sbjct: 194 AKC---------------------------------GCVMDAGRVFDKIVVRDAVLWNSM 220
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
L Y QNG +++ L R M G +P TL ++S S+ +A L +G++IH R G
Sbjct: 221 LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGF 280
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
S+ V ALI MY+K G++ A +F + + VSW ++I A HGL A+ LF+
Sbjct: 281 QSNDKVKTALIDMYAKCGSVKVALALFERLR-EKRVVSWNAIITGYAMHGLAVGALDLFD 339
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M + +PDHIT+VGVL AC+ G L+++G+ YN+M + I PT H+ M+DLLG
Sbjct: 340 KMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHC 398
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L EAY+ I NM ++PD WG+LL++C++H N++L ++A EKL+ +EPD+SG Y L
Sbjct: 399 GQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILA 458
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ GKWE +R+ M +KK SW++++NKV+ F D H DAIY ++
Sbjct: 459 NMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELK 518
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
++ + E G+ PDT SV HDVEED K M+ HSE+LAIAFGLIST T L I KNLR
Sbjct: 519 RLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLR 578
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+C DCH AIKFI K+++REI VRD R+H FK G+CSC D+W
Sbjct: 579 ICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 224/499 (44%), Gaps = 100/499 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LLQS + S+ GK +HA+ G+ + L L++ YA + S+ A+ +FD++P
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ L W +I Y G NAI ++ +
Sbjct: 110 KQNL-------------------------------FLWNVLIRGYAWNGPHDNAIILYHK 138
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+ + P FT+ VL +C+AL + G+ +H +V+K+G + V +L++MYAK G
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGC 198
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
M A VFD +++ RD V WNSM+A Y+QN
Sbjct: 199 VMDAGRVFD-------------------------------KIVVRDAVLWNSMLAAYAQN 227
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G+ E++ + M + ++P + TL + +S+ A++ L G++IH + R F + V
Sbjct: 228 GHPDESISLCREMAAN-GVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKV 286
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
ALI YAK G V++A +F+ LR++
Sbjct: 287 KTALIDMYAKCGSVKVALA---------------------------------LFERLREK 313
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
VV+W A++ GY +GL A++LF M +E +P++ T +L+ S LD G+ ++
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKMRKE-DRPDHITFVGVLAACSRGRLLDEGRALY 372
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+R G ++ +I + G ++ A + + + ++ W +++ + HG
Sbjct: 373 NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432
Query: 495 GEEAIQLFERMLELGIKPD 513
E A E+++EL +PD
Sbjct: 433 VELAELALEKLIEL--EPD 449
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 79/307 (25%)
Query: 15 FYAHLLQSNLKSRN---PFV------------GKLVHARIIKCGLHLSVFLKNSLMNFYA 59
Y +L L+ N PFV G+ +H +IK G +F+ +L++ YA
Sbjct: 135 LYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYA 194
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
K + A +VFD++ V RD+V W +++
Sbjct: 195 KCGCVMDAGRVFDKIVV-------------------------------RDAVLWNSMLAA 223
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y + G +I + EM + V PT+ T+ +V++S + L G+++H F + G
Sbjct: 224 YAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSN 283
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V +L++MYAK G +A A+F+ +R K V SWN +
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAI---------------------- 321
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
I GY+ +G AL +F M K+ +PD T L+AC+ L G+
Sbjct: 322 ---------ITGYAMHGLAVGALDLFDKMRKED--RPDHITFVGVLAACSRGRLLDEGRA 370
Query: 300 IHAYIIR 306
++ ++R
Sbjct: 371 LYNLMVR 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 408 PKPN-NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P+P +Y +++L +L+ GKQ+HA G A + ++ L+ +Y+ + ++ A
Sbjct: 42 PQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNA 101
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
R +F+ I +Q W +I A +G + AI L+ +ML+ G++PD+ T VL AC+
Sbjct: 102 RNLFDKIP-KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+ +G+ ++ + V K F A+++D+ + G + +A + + + D V
Sbjct: 161 LSAIGEGR---SIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVL 216
Query: 585 WGSLLSA 591
W S+L+A
Sbjct: 217 WNSMLAA 223
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/776 (32%), Positives = 411/776 (52%), Gaps = 108/776 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ--DQ 140
N +++ Y K G ++ A +VF+ MP R+ VSW +++ E G F+ + +F ++ +
Sbjct: 235 NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEG 294
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT----------------- 183
++P T+ +V+ C G++ G H +K GL G + V
Sbjct: 295 LMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEAR 354
Query: 184 -------------NSLLNMYAKVGD-----EMMAKAVFDG-------------------- 205
NS++ Y+K D E++ K +
Sbjct: 355 VLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEI 414
Query: 206 --MRLKNVSSW--------------NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
++LK + + N V+ + G L A F M + V +WN++I
Sbjct: 415 QFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALI 474
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
G+ QNG+ +AL ++ +++ S L+PD FT+AS LSACA L+ L GK+IH ++R F
Sbjct: 475 GGHVQNGFPRKALDLYL-LMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF 533
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+ L+ +L+ Y++ G I A+ F
Sbjct: 534 E---------------------------------LDEFICISLVSLYVQCGKILLAKLFF 560
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
D++ ++++V W M+ G+ QN DA+++F M+ P+ ++ L S +++L
Sbjct: 561 DNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALR 620
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
GK++H A++S V+ +LI MY+K G + ++ +F+ +H + E V+W +I
Sbjct: 621 LGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGE-VTWNVLITGY 679
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
HG G +AI+LF+ M G +PD +T++ +LTAC H GLV +G Y M+++ IKP
Sbjct: 680 GIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPK 739
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H+A +VD+LGRAG L EA + +P +PD W SLLS+CR +++LD+G+ A KLL
Sbjct: 740 LEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLL 799
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+ PD + Y + N Y+ GKW++ +R+ MK +G++K G SW++I KV F V D
Sbjct: 800 ELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGD 859
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
Q I ++ +I ++G+ PDT+ VLH++EED K ++LR+HSEKLAI+FGL++
Sbjct: 860 ESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLN 919
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T + TTLR+ KNLR+C DCH+AIK + K+ REI+VRD RFHHFK G CSC DYW
Sbjct: 920 TAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 231/499 (46%), Gaps = 74/499 (14%)
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCT 156
+C VFN ++ W ++ Y F++A+ +FVEM+ + +P FT+ V+ +C
Sbjct: 148 SCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACV 207
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
+ D+ G+ VH F +KT + V V N+L+ MY K G
Sbjct: 208 GVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFG---------------------- 245
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK-DSSLK 275
++ A FD+M +R++V+WNS++ +NG E+ G+F +L D L
Sbjct: 246 ---------FVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLM 296
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
PD T+ + + CA +++LG H ++ G G ++
Sbjct: 297 PDVATMVTVIPLCARQGEVRLGMVFHGLALK-----LGLCGELKVN-------------- 337
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
++LLD Y K G + AR +FD+ +++V++W +M+ GY ++ +
Sbjct: 338 --------------SSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRG 382
Query: 396 AVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS-VSNAL 453
A EL R M E K N TL +L V K+IH ALR G S V+NA
Sbjct: 383 AFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAF 442
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ Y+K G+++ A VF + + + SW ++I Q+G +A+ L+ M G++PD
Sbjct: 443 VAGYAKCGSLHYAEGVFCGMESKMVS-SWNALIGGHVQNGFPRKALDLYLLMRGSGLEPD 501
Query: 514 HITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
T +L+AC + G+ + +M++N ++ S+V L + G + A F
Sbjct: 502 LFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFIC--ISLVSLYVQCGKILLAKLF 559
Query: 573 IENMPLEPDVVAWGSLLSA 591
+NM E ++V W ++++
Sbjct: 560 FDNME-EKNLVCWNTMING 577
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 222/530 (41%), Gaps = 110/530 (20%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKA 201
P Q + +L C ++ G+K+H+F+ + V + L+ MY+ +
Sbjct: 92 PKQL-IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCL 150
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VF+ R KN+ WN++++GY +N +A
Sbjct: 151 VFNASRRKNL-------------------------------FLWNALLSGYLRNSLFRDA 179
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F M+ + PD FTL + AC + ++LG+ +H + ++T+ + VGNALI+
Sbjct: 180 VFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIA 239
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K G VE A K +FD + R++V+W
Sbjct: 240 MYGKFGFVESAVK---------------------------------VFDKMPQRNLVSWN 266
Query: 382 AMLVGYEQNGLNKDAVELFRSMVR--EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
+++ +NG+ +++ LF+ ++ EG P+ T+ ++ + + + G H AL
Sbjct: 267 SVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLAL 326
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+ G L V+++L+ MYSK G + AR +F+ + +SW SMI ++ A
Sbjct: 327 KLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGGYSKDRDFRGAF 384
Query: 500 QLFERM-LELGIKPDHITYVGVLTAC-----------THG-----GLVEQGQRYYNMMKN 542
+L +M +E +K + +T + VL C HG G ++ + N
Sbjct: 385 ELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVA 444
Query: 543 VHKIKPTPSHFASMV-------------DLLG---RAGLLQEA---YNFIENMPLEPDVV 583
+ K H+A V L+G + G ++A Y + LEPD+
Sbjct: 445 GYA-KCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLF 503
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSSCGK 631
SLLSAC K+L GK +L E D S L +LY CGK
Sbjct: 504 TIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICIS-LVSLYVQCGK 552
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 125/252 (49%), Gaps = 40/252 (15%)
Query: 43 GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV------KTLCSWNTILSAYAKQGRLD 96
GL +F SL++ A+ +S+S K++ M + +C +++S Y + G++
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICI--SLVSLYVQCGKIL 554
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
LA F+ M ++ V W T+I +++ +A+ MF +M+ ++ P + ++ L +C+
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACS 614
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
+ L GK++H F VK+ L+ VT SL++MYAK G ++ +FD + LK +WNV
Sbjct: 615 QVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNV 674
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+I GY +G+ +A+ +F +M +++ +P
Sbjct: 675 -------------------------------LITGYGIHGHGRKAIELFKSM-QNAGFRP 702
Query: 277 DKFTLASTLSAC 288
D T + L+AC
Sbjct: 703 DSVTFIALLTAC 714
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/764 (34%), Positives = 395/764 (51%), Gaps = 108/764 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H ++ L + + N+L+N Y K S+S+AK+V +AK
Sbjct: 164 GIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRV------------------FAK 205
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R R+ +SW+ + + G A+R F M+ + T+ + ++
Sbjct: 206 MER------------TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTI 253
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C++ + G+ +HS + +G + V N+++ MY + G
Sbjct: 254 LSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGA---------------- 297
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIE--RDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++ AR FD M E RDVV+WN M++ Y N +A+ ++ M
Sbjct: 298 ---------------VEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM- 341
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
L+ DK T S LSAC++ E + LG+ +H I+ E + VGNAL+S YA
Sbjct: 342 ---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA----- 393
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
K G AR +FD + R +++WT ++ Y +
Sbjct: 394 ----------------------------KCGSHTEARAVFDKMEQRSIISWTTIISAYVR 425
Query: 390 NGLNKDAVELFRSMVR-------EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
L +A LF+ M+ + KP+ +L+ + +++L+ GK + A G
Sbjct: 426 RRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCG 485
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+S +V A++ +Y K G I RR+F+ + R + W +MI AQ G EA++LF
Sbjct: 486 LSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLF 545
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK-IKPTPSHFASMVDLLG 561
RM G++PD ++V +L AC+H GL +QG+ Y+ M ++ + T HF + DLLG
Sbjct: 546 WRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLG 605
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L+EA F+E +P++PD VAW SLL+ACR H++L K A KLL +EP + Y A
Sbjct: 606 RGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVA 665
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ KW A +RK M GVKK +G S ++I +H F D HP+ I +
Sbjct: 666 LSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREE 725
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+AK+ ++KE G+VPDT VLH V+E KE++L HSE+LAIA GLISTP T LR+ KN
Sbjct: 726 LAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKN 785
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC+DCH+A K I K+ R+IVVRD TRFH FK G CSC+DYW
Sbjct: 786 LRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 154/585 (26%), Positives = 257/585 (43%), Gaps = 110/585 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
YA LLQ +++ G+ +H+ +K L ++ L N +++ YA +S AK FD +
Sbjct: 46 YARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDAL 105
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
R+ SWT ++ + G+ K +R
Sbjct: 106 E-------------------------------QRNLYSWTGLVAAFAISGQSKETLRALE 134
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M QD V P T + L SC L G ++H VV + L V+N+LLNMY K G
Sbjct: 135 RMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCG 194
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
AK VF M R+V++W+ M ++
Sbjct: 195 SLSHAKRVFAKMERT------------------------------RNVISWSIMAGAHAL 224
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G +EAL F ML +K K + + LSAC++ ++ G+ IH+ I + F++
Sbjct: 225 HGNVWEALRHFRFMLL-LGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELL 283
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V NA+++ Y + G VE A+K +FD++ +
Sbjct: 284 VANAVMTMYGRCGAVEEARK---------------------------------VFDAMDE 310
Query: 375 --RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
RDVV+W ML Y N KDA++L++ M + + T ++LS SS + G+
Sbjct: 311 ALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGR 367
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+H + ++ V NAL++MY+K G+ AR VF+ + R +SWT++I A +
Sbjct: 368 VLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRS-IISWTTIISAYVRR 426
Query: 493 GLGEEAIQLFERMLELG-------IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
L EA LF++MLEL +KPD + +V +L AC +EQG+ +
Sbjct: 427 RLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASC-G 485
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+ + ++V+L G+ G ++E + + PDV W ++++
Sbjct: 486 LSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIA 530
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 237/549 (43%), Gaps = 112/549 (20%)
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAK 192
+++ + V T +L C L G+K+HS VK L G + + N +++MYA
Sbjct: 32 LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYA- 90
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
H A+A FD + +R++ +W ++A +
Sbjct: 91 ------------------------------HCDSPGDAKAAFDALEQRNLYSWTGLVAAF 120
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+ +G E L M +D ++PD T + L +C + E L+ G +IH ++ + +
Sbjct: 121 AISGQSKETLRALERMRQD-GVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEID 179
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V NAL++ Y K G + A+R+F +
Sbjct: 180 PKVSNALLNMYKKCGS---------------------------------LSHAKRVFAKM 206
Query: 373 -RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
R R+V++W+ M + +G +A+ FR M+ G K + +LS SS A + G
Sbjct: 207 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 266
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI-HWRQETVSWTSMIVALA 490
+ IH+ SG S L V+NA++TMY + G + AR+VF+ + ++ VSW M+ A
Sbjct: 267 RLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYV 326
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN-------- 542
+ G++AIQL++RM ++ D +TYV +L+AC+ V G+ + + N
Sbjct: 327 HNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 383
Query: 543 -----VHKIKPTPSH-----------------FASMVDLLGRAGLLQEAYNFIENM---- 576
V SH + +++ R L+ EA + + M
Sbjct: 384 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 443
Query: 577 ------PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY-SALCNLYSSC 629
++PD +A+ ++L+AC L+ GK+ +E+ + A +A+ NLY C
Sbjct: 444 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 503
Query: 630 GKWEDAANI 638
G+ E+ I
Sbjct: 504 GEIEEGRRI 512
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 180/425 (42%), Gaps = 74/425 (17%)
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV-GNALISCYAKVG 327
L+ +++ + T A L CA + L G++IH+ ++ + GN ++S YA
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
G A+ FD+L R++ +WT ++ +
Sbjct: 94 SP---------------------------------GDAKAAFDALEQRNLYSWTGLVAAF 120
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+G +K+ + M ++G +P+ T L SL G +IH + S
Sbjct: 121 AISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDP 180
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
VSNAL+ MY K G+++ A+RVF + + +SW+ M A A HG EA++ F ML
Sbjct: 181 KVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLL 240
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
LGIK V +L+AC+ LV+ G+ ++ + + + +++ + GR G ++
Sbjct: 241 LGIKATKSAMVTILSACSSPALVQDGRLIHSCIA-LSGFESELLVANAVMTMYGRCGAVE 299
Query: 568 E---------------------------------AYNFIENMPLEPDVVAWGSLLSACRV 594
E A + M L D V + SLLSAC
Sbjct: 300 EARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRADKVTYVSLLSACSS 359
Query: 595 HKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
+++ LG++ ++++ E + N +AL ++Y+ CG +A + M+ +
Sbjct: 360 AEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSI-----I 414
Query: 654 SWVQI 658
SW I
Sbjct: 415 SWTTI 419
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 157/361 (43%), Gaps = 62/361 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL + + + +G+++H +I+ L +V + N+L++ YAK S + A+ VFD+M
Sbjct: 350 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 409
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+++ SW TI+SAY ++ + AC +F M + KN
Sbjct: 410 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELE-----------------KNG------ 446
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+V P ++L +C + L GK V GLS V +++N+Y K G+
Sbjct: 447 -SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 505
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +FDG+ + DV WN+MIA Y+Q
Sbjct: 506 IEEGRRIFDGVCSRP------------------------------DVQLWNAMIAVYAQF 535
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EAL +F M + ++PD F+ S L AC++ GK + + T +
Sbjct: 536 GQSHEALKLFWRM-EMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTI 594
Query: 316 GNALISCYAKV----GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
+ C A + G ++ A++ +E+ + + +A+T+LL D+ A+ + +
Sbjct: 595 QH--FGCVADLLGRGGRLKEAEEFLEKLPVKP-DAVAWTSLLAACRNHRDLKRAKEVANK 651
Query: 372 L 372
L
Sbjct: 652 L 652
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 264/780 (33%), Positives = 411/780 (52%), Gaps = 102/780 (13%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLH-LSVFLKNSLMNFYAKTESISYAK 68
I P LL+S + + +G+ +HA II+ + L FL N L+N Y+K + ++ A+
Sbjct: 3 IHPQNLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQ 62
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
V ++T+ V+WT++I RF
Sbjct: 63 HVLSLTHLRTV-------------------------------VTWTSLISGCVHNRRFLP 91
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ F M +D V P FT V + + GK++H +K G+ V V S +
Sbjct: 92 ALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFD 151
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY K G F G A FD+M +R++ TWN+
Sbjct: 152 MYCKTG--------FRGD-----------------------ACNMFDEMPQRNLATWNAY 180
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+ Q+ +A+ F L +P+ T + L+AC ++ +L LG+Q+HA+I+R
Sbjct: 181 ISNAVQDRRSLDAIVAFKEFLCVHG-EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCG 239
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ V N LI D Y K GDI A +
Sbjct: 240 YKEDVSVANGLI---------------------------------DFYGKCGDIVSAEMV 266
Query: 369 FDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F+ + +R +VV+W +ML QN + A +F R+ +P ++ +S++LS + L
Sbjct: 267 FNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGG 325
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ G+ +HA A+++ ++ V +AL+ MY K G+I A +VF+ + R V+W +MI
Sbjct: 326 LELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERN-LVTWNAMIG 384
Query: 488 ALAQHGLGEEAIQLFERML--ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
A G + A++LFE M GI+P ++T + +L+ C+ G VE+G + + M+ +
Sbjct: 385 GYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYG 444
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I+P HFA +VDLLGR+GL+ AY FI+NM ++P + WG+LL ACR+H +LGKIAA
Sbjct: 445 IEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAA 504
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
EKL ++ +SG + L N+ +S G+WE+A +RK MK +G+KK G+SW+ ++N++HVF
Sbjct: 505 EKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVF 564
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
+D H + I + K+ +KE G+VPDT L D+E++ K + +HSEK+A+AF
Sbjct: 565 QAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAF 624
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GLI+ P+ +RI KNLR+C DCHSAIKFI ++V REI+VRD RFH FK G CSC+DYW
Sbjct: 625 GLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/643 (37%), Positives = 362/643 (56%), Gaps = 65/643 (10%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P QFT +S+L++ A + G+++HS + K G + V +L++MYAK D
Sbjct: 8 PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD------- 60
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+HS A FDQM ER++V+WNSMI G+ N A+
Sbjct: 61 -------------------MHS-----AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAV 96
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G+F ++L++ ++ P++ +++S LSACAN+ L G+Q+H ++
Sbjct: 97 GVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVV----------------- 139
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
K G V + +L+D Y K ++F + DRDVV W
Sbjct: 140 --KFGLVPLT--------------YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 183
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+++G+ QN ++A F M REG P+ + S +L S+SLA+L G IH ++ G
Sbjct: 184 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 243
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ + +LITMY+K G++ A +VF I +SWT+MI A HG + I+LF
Sbjct: 244 YVKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHGCANQVIELF 302
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E ML GI+P H+T+V VL+AC+H G VE+G ++N MK +H + P P H+A MVDLLGR
Sbjct: 303 EHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGR 362
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L EA FIE+MP++P WG+LL ACR + NL +G+ AAE+L +EP N G Y L
Sbjct: 363 AGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLL 422
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+ + G+ E+A +R+ M GV+K G SW+ ++N VF D H D IY +
Sbjct: 423 ANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKML 482
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
K+ +K+ G+V +T V + +EE+ +EQ L +HSEKLA+AFGL++ P ++ +RI KNL
Sbjct: 483 EKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNL 542
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R C CH+ +K K+ DREI+VRD RFH F G CSC DYW
Sbjct: 543 RTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 249/551 (45%), Gaps = 119/551 (21%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P +F ++ +L ++ + G+ +H+ I K G ++F+ +L++ YAK + A +V
Sbjct: 8 PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD+MP + L SWN+++ + D A +G FK+ +
Sbjct: 68 FDQMPERNLVSWNSMIVGFFHNNLYDRA------------------------VGVFKDVL 103
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
R + V+P + +V+SVL++C +G L+ G++VH VVK GL V NSL++MY
Sbjct: 104 R------EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMY 157
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
K + +G++L F + +RDVVTWN ++
Sbjct: 158 FK------CRFFDEGVKL-------------------------FQCVGDRDVVTWNVLVM 186
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G+ QN EA F M ++ L PD+ + ++ L + A+L L G IH II+ +
Sbjct: 187 GFVQNDKFEEACNYFWVMRREGIL-PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYV 245
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ +LI+ YAK G +L+D Y ++F+
Sbjct: 246 KNMCILGSLITMYAKCG-----------------------SLVDAY----------QVFE 272
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+ D +V++WTAM+ Y+ +G +ELF M+ EG +P++ T +LS S ++
Sbjct: 273 GIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEE 332
Query: 431 G-------KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
G K+IH + G ++ + +AG ++ A+R + + W
Sbjct: 333 GLAHFNSMKKIH--DMNPGPEHYA----CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWG 386
Query: 484 SMIVALAQHG---LGEEAIQLFERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNM 539
+++ A ++G +G EA ER+ E+ +P + YV + CT G +E+ +
Sbjct: 387 ALLGACRKYGNLKMGREAA---ERLFEM--EPYNPGNYVLLANMCTRSGRLEEANEVRRL 441
Query: 540 MKNVHKIKPTP 550
M V+ ++ P
Sbjct: 442 M-GVNGVRKEP 451
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 159/387 (41%), Gaps = 51/387 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN S+ S L A++ N G+ VH ++K GL ++ NSLM+ Y K
Sbjct: 110 PNEVSVSSVLSACANMGGLNF-------GRQVHGVVVKFGLVPLTYVMNSLMDMYFKC-- 160
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ FDE ++F + +RD V+W +++ + +
Sbjct: 161 -----RFFDE------------------------GVKLFQCVGDRDVVTWNVLVMGFVQN 191
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
+F+ A F M ++ +LP + + ++VL S +L L G +H ++K G + +
Sbjct: 192 DKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCIL 251
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IE 239
SL+ MYAK G + A VF+G+ NV SW ++S + G + F+ M IE
Sbjct: 252 GSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIE 311
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
VT+ +++ S G E L F +M K + P A + L K+
Sbjct: 312 PSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKR 371
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVG----GVEIAQKIVEQSGISYLNVIAFTTLLDG 355
+I T V AL+ K G G E A+++ E + N + +
Sbjct: 372 ---FIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTR 428
Query: 356 YIKIGDIGPARRIF--DSLRDRDVVAW 380
++ + RR+ + +R +W
Sbjct: 429 SGRLEEANEVRRLMGVNGVRKEPGCSW 455
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
GP PN +T S++LS S++ + HG+Q+H+ + G +++ V AL+ MY+K ++++A
Sbjct: 5 GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACT 525
RVF+ + R VSW SMIV + L + A+ +F+ +L E + P+ ++ VL+AC
Sbjct: 65 VRVFDQMPERN-LVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
+ G + G++ + ++ + P S++D+ + E + + + DVV W
Sbjct: 124 NMGGLNFGRQVHGVVVKF-GLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DRDVVTW 181
Query: 586 GSLL 589
L+
Sbjct: 182 NVLV 185
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/703 (35%), Positives = 385/703 (54%), Gaps = 93/703 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++ AY+ GR+D+A EVF+ + +D VSWT ++ + E FK A+++F +M
Sbjct: 178 TALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT SV +C L GK VH +K+ + V +LL++Y K GD
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGD------- 290
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+D AR F+++ ++DV+ W+ MIA Y+Q+ EA+
Sbjct: 291 ------------------------IDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAV 326
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
MF M + + + P++FT AS L ACA +E L LG QIH ++I+ + V NAL+
Sbjct: 327 EMFFQM-RQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDV 385
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +E + + +S P R DV W
Sbjct: 386 YAKCGRMENSMXLFAES------------------------PHRN--------DVTPWNT 413
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++VG+ Q G + A+ LF +M+ + T S+ L +SLA+L+ G QIH+ +++
Sbjct: 414 VIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTT 473
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V+NALI MY+K G+I AR VF+L++ +Q+ VSW +MI + HGL
Sbjct: 474 FDKDIVVTNALIDMYAKCGSIKDARLVFDLMN-KQDEVSWNAMISGYSMHGL-------- 524
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
AC + GL++QGQ Y+ M H I+P H+ MV LLGR
Sbjct: 525 --------------------ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGR 564
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
G L +A I+ +P +P V+ W +LL AC +H +++LG+I+A+ +L +EP + + L
Sbjct: 565 GGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLL 624
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y++ +W++ A++RK+MK GVKK G SW++ Q VH F V D HP+ I +
Sbjct: 625 SNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGML 684
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ + K+ G++P+ VL DVE++ KE++L HSE+LA++FG+I TP + +RIMKNL
Sbjct: 685 EWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNL 744
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+C DCH+AIK I K+V REIVVRD RFHHF++GLCSC DYW
Sbjct: 745 RICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/590 (25%), Positives = 266/590 (45%), Gaps = 102/590 (17%)
Query: 10 ISPLEF----YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
+SP EF YA+ LQ ++ P GK +H I+K G L +F
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLF---------------- 74
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+WN +L+ Y K L A ++F+ MP R+++S+ T+I Y E R
Sbjct: 75 ---------------AWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
F AI +FV + ++ F T++L ++ G +H+ + K G V +
Sbjct: 120 FLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTA 179
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++ Y+ G +A+ VFDG+ K+ +V+W
Sbjct: 180 LIDAYSVCGRVDVAREVFDGILYKD-------------------------------MVSW 208
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
M+ +++N EAL +F+ M + KP+ FT AS AC LE +GK +H +
Sbjct: 209 TGMVTCFAENDCFKEALKLFSQM-RMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCAL 267
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
++ ++ VG AL+ Y K GDI A
Sbjct: 268 KSRYELDLYVGVALLDLYTKS---------------------------------GDIDDA 294
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R F+ + +DV+ W+ M+ Y Q+ +K+AVE+F M + PN +T +++L +++
Sbjct: 295 RXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATM 354
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
L+ G QIH ++ G S + VSNAL+ +Y+K G + + +F R + W ++
Sbjct: 355 EGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTV 414
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
IV Q G GE+A++LF MLE ++ +TY L AC +E G + +++
Sbjct: 415 IVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTF 474
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
K A ++D+ + G +++A + ++ + D V+W +++S +H
Sbjct: 475 DKDIVVTNA-LIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMH 522
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 211/461 (45%), Gaps = 86/461 (18%)
Query: 140 QVLPTQF---TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
V P++F + L C + S GK +H ++K G GC L+++A
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRG--GC-------LDLFA----- 75
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
WN+++++++ S L A FD+M ER+ +++ ++I GY+++
Sbjct: 76 -----------------WNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESV 118
Query: 257 YDFEALGMFANMLKDS-SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EA+ +F + ++ L P F + L +++ +LG IHA I + ++ V
Sbjct: 119 RFLEAIELFVRLHREGHELNP--FVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFV 176
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G ALI D Y G + AR +FD + +
Sbjct: 177 GTALI---------------------------------DAYSVCGRVDVAREVFDGILYK 203
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V+WT M+ + +N K+A++LF M G KPNN+T +++ L + D GK +H
Sbjct: 204 DMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVH 263
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
AL+S L V AL+ +Y+K+G+I+ AR F I +++ + W+ MI AQ
Sbjct: 264 GCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIP-KKDVIPWSFMIARYAQSDQS 322
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVH----KIKPTP 550
+EA+++F +M + + P+ T+ VL AC T GL N+ +H KI
Sbjct: 323 KEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL--------NLGNQIHCHVIKIGLHS 374
Query: 551 SHFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
F S ++D+ + G ++ + P DV W +++
Sbjct: 375 DVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVI 415
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 281/829 (33%), Positives = 410/829 (49%), Gaps = 134/829 (16%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM--PVKTLCSWN 83
S+N K HA+II L F+ L+ Y+ S+ A+ VFD+ P LC N
Sbjct: 42 SKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLC--N 99
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
+L Y + GR ++ + +F M +
Sbjct: 100 AMLCGYLQSGR-------------------------------YRETLELFGLMRSRNLEV 128
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+ T L +C + D ++G E+++ AV
Sbjct: 129 DSCSCTFALKACASSLDY------------------------------EMGMEIISSAVE 158
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
GM KN + ++S + G++ A+ FD M +DVV WNS+I GY Q G A
Sbjct: 159 KGME-KNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQ 217
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI----------IRTEF-DAT 312
+F M S +KP T+ S + AC + LKLGK +H Y+ + T F D
Sbjct: 218 LFFEM-HGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMY 276
Query: 313 GPVG--------------------NALISCYAKVGGV----EIAQKIVEQSG-------I 341
+G NA+IS + G V ++ ++V SG +
Sbjct: 277 SKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIV 336
Query: 342 SYL-------------------------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
S L N+I T ++D Y K G + A +F+ ++DR+
Sbjct: 337 SLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRN 396
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V+ WTAMLVG QNG +DA+ LF M EG N+ T +++ + L SL G+ IH
Sbjct: 397 VITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHG 456
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
R G A + AL+ MY+K G IN A R+F+ ++ V W SMI HG G
Sbjct: 457 HLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGY 516
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
+A+ ++ +M+E G+KP+ T++ +L+AC+H LVEQG +N M+ H I+P H+A +
Sbjct: 517 QAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACL 576
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAG +EA IE MP +P +LLS CR HKN++LG ++KLL ++ N
Sbjct: 577 VDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNP 636
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y+ +W+ IR M+ G+KKT G+S V+ N VH F D HP +
Sbjct: 637 GIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWE 696
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
IY+ + + ++ G+VPDT+ VL DV+E++K +ML HSE+LAIAFGL++TP + +
Sbjct: 697 EIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLI 756
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RI KNLRVC DCH+ K+I K+V REI+VRDA RFHHF G CSC DYW
Sbjct: 757 RITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 211/506 (41%), Gaps = 104/506 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+P ++ S L+Q+ N +GK +H ++ GL + + S ++ Y+K
Sbjct: 229 PSPITMTS-------LIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A+ VF +MP + L SWN ++S + G L E F+L
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNG---LVGESFDL------------------- 319
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F +V+ T+ S+L C+ L+ GK +H +++ S + ++
Sbjct: 320 ---------FHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLI-LS 369
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+++++Y+K G A VF+ M+ +NV +
Sbjct: 370 TAIVDLYSKCGSLKQATFVFNRMKDRNV-------------------------------I 398
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TW +M+ G +QNG+ +AL +FA M ++ + + T S + +CA+L LK G+ IH +
Sbjct: 399 TWTAMLVGLAQNGHAEDALRLFAQM-QEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGH 457
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ R F AL+ YAK G + +A++I IS
Sbjct: 458 LFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSIS--------------------- 496
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+DVV W +M+ GY +G AV ++ M+ EG KPN T ++LS S
Sbjct: 497 -----------KDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACS 545
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSW 482
++ G + S R + A L+ + S+AG A+ + + ++ T
Sbjct: 546 HSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVL 605
Query: 483 TSMIVALAQHGLGEEAIQLFERMLEL 508
+++ H IQ +++L L
Sbjct: 606 EALLSGCRTHKNINLGIQTSDKLLAL 631
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/666 (36%), Positives = 380/666 (57%), Gaps = 68/666 (10%)
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
++ G +A+R+F + P T T L++C LGDL G+ V G
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V V +SLL++YA+ G A+ D +++ FD+M
Sbjct: 143 VFVCSSLLHLYARWG------AMGDAVKV-------------------------FDRMPR 171
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD VTW++M+AG+ G +A+ M+ M +D +K D+ + + AC +++G
Sbjct: 172 RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG-VKGDEVVMIGVIQACTAARNVRMGAS 230
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H +++R ++V+ T+L+D Y K
Sbjct: 231 VHGHLLRHGM---------------------------------RMDVVTATSLVDMYAKN 257
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
G + A R+F + R+ V+W+AM+ G+ QNG + +A+ LFR+M G +P++ L + L
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S++ L G+ +H +R + + + + A I MYSK G++ +A+ +FN+I R +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISDR-DL 375
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
+ W +MI HG G++A+ LF+ M E G++PDH T+ +L+A +H GLVE+G+ ++
Sbjct: 376 ILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGC 435
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M N KI P H+ +VDLL R+GL++EA + + +M EP V W +LLS C +K L+
Sbjct: 436 MVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLE 495
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ A+ +L ++PD+ G + + NLY++ KW+ +RK MK G KK G S ++I+
Sbjct: 496 LGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIR 555
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
H F +ED HPQR+ I +K+AK+ E+++MG++P T V HD+EE+VKEQ L +HSE
Sbjct: 556 GTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSE 615
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGL++T T L I+KNLRVC DCH AIK+I K+ DREIVVRDA RFHHFK G+C
Sbjct: 616 KLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVC 675
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 676 SCRDYW 681
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 215/484 (44%), Gaps = 103/484 (21%)
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
S + FD + +++L YA+ G + A +VF+ MP RD V+W+T++ + G
Sbjct: 129 SVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAG 188
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
+ +AI+M+ M +D V + + V+ +CTA ++ G VH +++ G+ V
Sbjct: 189 QPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTAT 248
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
SL++MYAK G +A VF M +N SW
Sbjct: 249 SLVDMYAKNGLLDVACRVFGLMVHRNDVSW------------------------------ 278
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
++MI+G++QNG EAL +F NM + S ++PD L S L AC+N+ LKLG+ +H +I
Sbjct: 279 -SAMISGFAQNGQSDEALRLFRNM-QASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R FD +G A I Y+K G + AQ
Sbjct: 337 VR-RFDFNCILGTAAIDMYSKCGSLASAQM------------------------------ 365
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
+F+ + DRD++ W AM+ +G +DA+ LF+ M G +P++ T +++LS S
Sbjct: 366 ---LFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSH 422
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
++ GK V++ IT K +
Sbjct: 423 SGLVEEGKLWFGCM----------VNHFKITPAEK---------------------HYVC 451
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++ LA+ GL EEA L M +P +V +L+ C + +E G+ ++ N+
Sbjct: 452 LVDLLARSGLVEEASDLLTSM---KAEPTVAIWVALLSGCLNNKKLELGE---SIADNIL 505
Query: 545 KIKP 548
+++P
Sbjct: 506 ELQP 509
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 64/280 (22%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
++Q+ +RN +G VH +++ G+ + V SL++ YAK
Sbjct: 215 VIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAK------------------ 256
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G LD+AC VF LM +R+ VSW+ +I + + G+ A+R+F M
Sbjct: 257 -------------NGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQA 303
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P + S L +C+ +G L G+ VH F+V+ C+ + + ++MY+K G
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGS--- 359
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
L A+ F+ + +RD++ WN+MIA +G
Sbjct: 360 ----------------------------LASAQMLFNMISDRDLILWNAMIACCGAHGRG 391
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
+AL +F M ++ ++PD T AS LSA ++ ++ GK
Sbjct: 392 QDALTLFQEM-NETGMRPDHATFASLLSALSHSGLVEEGK 430
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/737 (34%), Positives = 402/737 (54%), Gaps = 72/737 (9%)
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
I+ + ++G +NA+ + V M Q L T+ T SVL C L L+ GKKVHS + +
Sbjct: 73 ILHFCQLGDLENAMEL-VCMCQKSELETK-TYGSVLQLCAGLKSLTDGKKVHSIIKSNSV 130
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH--------------- 221
+ L++ YA GD + VFD M KNV WN +VS +
Sbjct: 131 GVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 222 -----IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
I R + A FD++ +RDV++WNSMI+GY NG LG++ M+ +
Sbjct: 191 MVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGIDV 249
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D T+ S L CAN L LGK +H+ I++ F+ N L+ Y+K G ++ A ++
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVF 309
Query: 337 EQSG----ISY-----------------------------LNVIAFTTLLDGYIKIGDIG 363
E+ G +S+ L+V+A T++L + G +
Sbjct: 310 EKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLD 369
Query: 364 PARRIFDSLRDRDVVA----WTAMLVGYEQNGLNKDAVELFRSMVREGP----------K 409
+ + D ++ ++ + A++ Y + G + A +F +MV + K
Sbjct: 370 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELK 429
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P++ T++ +L +SL++L+ GK+IH LR+G +S V+NAL+ +Y K G + AR +
Sbjct: 430 PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLL 489
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F++I ++ VSWT MI HG G EAI F M + GI+PD ++++ +L AC+H GL
Sbjct: 490 FDMIP-SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+EQG R++ +MKN I+P H+A MVDLL R G L +AY FIE +P+ PD WG+LL
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
CR++ +++L + AE++ +EP+N+G Y L N+Y+ K E+ +R+ + G++K
Sbjct: 609 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRK 668
Query: 650 TQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
G SW++I+ +V++F + HP I + + K+ ++KE G+ P T L + +E
Sbjct: 669 NPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEM 728
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE L HSEKLA+AFGL++ P T+R+ KNLRVC DCH KF+ K REIV+RD+
Sbjct: 729 QKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDS 788
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHFK G CSCR +W
Sbjct: 789 NRFHHFKDGYCSCRGFW 805
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 177/679 (26%), Positives = 284/679 (41%), Gaps = 116/679 (17%)
Query: 16 YAHLLQ--SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
Y +LQ + LKS GK VH+ I + + L L++FYA + ++VFD
Sbjct: 102 YGSVLQLCAGLKSLTD--GKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDT 159
Query: 74 MPVKTLCSWNTILSAYAKQG--------------------RLDLACEVFNLMPNRDSVSW 113
M K + WN ++S YAK G R + A E+F+ + +RD +SW
Sbjct: 160 MEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISW 219
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
++I Y G + + ++ +M+ + T+ SVL C G LS GK VHS +K
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
+ +N +N+LL+MY+K GD A VF+ M +NV SW +++ + G D A
Sbjct: 280 SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIIL 339
Query: 234 FDQM----IERDVVTWNSMI-----AGYSQNGYD----FEALGMFANM------------ 268
QM ++ DVV S++ +G NG D +A M +N+
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 399
Query: 269 ---------------LKD--------SSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
+KD LKPD T+A L ACA+L L+ GK+IH YI+
Sbjct: 400 CGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R + + V NAL+ D Y+K G +G A
Sbjct: 460 RNGYSSDRHVANALV---------------------------------DLYVKCGVLGLA 486
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R +FD + +D+V+WT M+ GY +G +A+ F M G +P+ + ++L S
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546
Query: 426 ASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L+ G + + L ++ + S+ GN++ A + + + W +
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++ + E A ++ ER+ EL +P++ Y VL A + E+ + M + +
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFEL--EPENTGYY-VLLANIYAE-AEKREEVKRMREKIG 662
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
K + S +++ GR L N P SLL R K + G
Sbjct: 663 KKGLRKNPGCSWIEIKGRVNLFVSGNN-----SSHPHSKKIESLLKKMR-RKMKEEGYFP 716
Query: 605 AEKLLLIEPDNSGAYSALC 623
K LI D ALC
Sbjct: 717 KTKYALINADEMQKEMALC 735
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/562 (41%), Positives = 337/562 (59%), Gaps = 4/562 (0%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
SG L+ A FD++ D +N++ GY + + M++ ML S+ P+KFT
Sbjct: 67 SGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLH-KSVSPNKFTYPP 125
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+ AC ++ GKQIHA++++ F A G N LI Y +E A+++ + +
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDN--MPQ 183
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+V+++T+L+ GY + G + AR +F+ + +R+ V+W AM+ Y Q+ +A LF M
Sbjct: 184 RDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRM 243
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
E + + ++MLS + L +L+ GK IH +SG ++ +I MY K G +
Sbjct: 244 RLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCL 303
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A VFN + ++ SW MI LA HG GE AI+LF+ M + PD IT+V VL+A
Sbjct: 304 EKASEVFNELP-QKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 362
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C H GLVE+G+ Y+ M V +KP HF MVDLLGRAGLL+EA I MP+ PD
Sbjct: 363 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAG 422
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
G+L+ ACR+H N +LG+ +K++ +EP NSG Y L NLY+S G+WED A +RK M
Sbjct: 423 VLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMN 482
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
GVKK GFS ++ ++ V F HPQ IY K+ +I + I+ +G+VPDT VLH
Sbjct: 483 DRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLH 542
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
D++E+ KE L +HSEKLAIAFGL+ T TLRI KNLR+C DCH A K I K+ DREI
Sbjct: 543 DIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREI 602
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
++RD RFHHF+ G CSC+DYW
Sbjct: 603 IIRDRNRFHHFRMGGCSCKDYW 624
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 197/426 (46%), Gaps = 39/426 (9%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
A +K G L+ A EVF+ +P+ D+ + TI Y +N I M+ M+ V P +
Sbjct: 61 FCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNK 120
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT ++ +C + GK++H+ V+K G N+L++MY A+ VFD
Sbjct: 121 FTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDN 180
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M ++V SW +++ + G +D AR F+ M ER+ V+WN+MIA Y Q+ EA +F
Sbjct: 181 MPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALF 240
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M + ++ DKF AS LSAC L L+ GK IH YI ++ + + +I Y K
Sbjct: 241 DRM-RLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCK 299
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A + +F+ L + + +W M+
Sbjct: 300 CGCLEKASE---------------------------------VFNELPQKGISSWNCMIG 326
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK---QIHASALRSG 442
G +G + A+ELF+ M RE P+ T +LS + ++ GK Q L G
Sbjct: 327 GLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVL--G 384
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ ++ + +AG + AR++ N + + +++ A HG E Q+
Sbjct: 385 LKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIG 444
Query: 503 ERMLEL 508
++++EL
Sbjct: 445 KKVIEL 450
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 201/422 (47%), Gaps = 48/422 (11%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+SP +F Y L+++ GK +HA ++K G F N+L++ Y +S+ A+
Sbjct: 116 VSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQAR 175
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+VFD MP + + SW ++++ Y++ G +D A EVF LMP R+SVSW +I Y + R
Sbjct: 176 RVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHE 235
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A +F M + V+ +F S+L++CT LG L GK +H ++ K+G+ + ++++
Sbjct: 236 AFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVID 295
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVV-SLHIHS---GRLDLARAQFDQMIERDVVT 244
MY K G A VF+ + K +SSWN ++ L +H ++L + +M+ D +T
Sbjct: 296 MYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGIT 355
Query: 245 WNSMIAGYSQNG----------YDFEALGMFANM----------------------LKDS 272
+ ++++ + +G Y E LG+ M + +
Sbjct: 356 FVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEM 415
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG---GV 329
+ PD L + + AC +LG+QI +I E +G L + YA G V
Sbjct: 416 PVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRY-VLLANLYASAGRWEDV 474
Query: 330 EIAQKIVEQSGISY---LNVIAFTTLLDGYIKIGDIGP-ARRIFDSLRDRDVVAWTAMLV 385
+K++ G+ ++I + +D +I G P A+ I+ L D + T +
Sbjct: 475 AKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKL---DEILETIRSI 531
Query: 386 GY 387
GY
Sbjct: 532 GY 533
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
K GD+ A +FD + D + + GY + L ++ + ++ M+ + PN +T
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 418 MLSVSSSLASLDHGKQIHASALRSG-EASSLSVSN------------------------- 451
++ +++ GKQIHA L+ G A S++N
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185
Query: 452 -----ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+LIT YS+ G ++ AR VF L+ R +VSW +MI A Q EA LF+RM
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERN-SVSWNAMIAAYVQSNRLHEAFALFDRMR 244
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ D +L+ACT G +EQG+ + ++ I+ +++D+ + G L
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK-SGIELDSKLATTVIDMYCKCGCL 303
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++A +P + + +W ++ +H
Sbjct: 304 EKASEVFNELP-QKGISSWNCMIGGLAMH 331
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 277/760 (36%), Positives = 412/760 (54%), Gaps = 104/760 (13%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VH I++ GL L + L N L+N YAK
Sbjct: 393 GREVHGHILRTGLIDLKIALSNGLVNMYAKC----------------------------- 423
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G +D A VF L+ RD VSW TII ++ G + A+ + M Q + P+ F S
Sbjct: 424 --GAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAIS 481
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L+SC +L L+AG++VH VK GL +V+N+L+ MY G
Sbjct: 482 GLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCG--------------AR 527
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA-GYSQNGYDFEALGMFANML 269
SW + F+ M E D+V+WNS++ S + E++ +F+NM+
Sbjct: 528 SESWEI-----------------FNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMM 570
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ S L P+K T + LSA + L L+LGKQ+HA +++ V NAL+SCYAK G
Sbjct: 571 R-SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSG-- 627
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAMLVGYE 388
D+ ++F S+ R D V+W +M+ GY
Sbjct: 628 -------------------------------DMDSCEQLFSSMSGRRDAVSWNSMISGYI 656
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
NG ++ ++ M+ + T S +L+ +S+A+L+ G ++HA +RS S +
Sbjct: 657 YNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVV 716
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V +AL+ MYSK G I+ A +VFN + + E SW SMI A+HGLGE+A+++FE M
Sbjct: 717 VESALLDMYSKCGRIDYASKVFNSMSQKNE-FSWNSMISGYARHGLGEKALEIFEEMQRN 775
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G PDH+T+V VL+AC+H GLV++G Y+ MM++ H I P H++ ++DLLGRAG L +
Sbjct: 776 GACPDHVTFVSVLSACSHAGLVDRGLDYFEMMED-HGILPHIEHYSCVIDLLGRAGKLLK 834
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKN---LDLGKIAAEKLLLIEPDNSGAYSALCNL 625
+I MP++P+ + W ++L ACR K+ +DLGK A+ LL +EP N Y N
Sbjct: 835 IQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNF 894
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y++ G+WED A R +M +KK G SWV + + VH F D HP IY K+ +
Sbjct: 895 YAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFL 954
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
+IK G+VP T L+D+EE+ KE++L +HSEKLA+AF L + + +RIMKNLRVC
Sbjct: 955 IQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVC 1014
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A ++I ++V R+I++RD+ RFHHF+ G CSC DYW
Sbjct: 1015 GDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 158/677 (23%), Positives = 287/677 (42%), Gaps = 151/677 (22%)
Query: 78 TLCSWNTILSAYAK--QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
T+C N ++S Y G A +VF+ P RD ++W ++ Y + G + +F+
Sbjct: 198 TVC--NALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255
Query: 136 MVQD----QVLPTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNM 189
M+ D ++ P + T S++ + T+L S+G +V + V+K+G S + V ++L++
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSA 314
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
+A+ G LD A+ F + ER+ VT N +I
Sbjct: 315 FAR-------------------------------HGMLDEAKDIFINLKERNAVTLNGLI 343
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL----EKLKLGKQIHAYII 305
G + EA+G+F + D F + LSA A + L G+++H +I+
Sbjct: 344 VGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVV--LLSAVAEFSIPEDGLMRGREVHGHIL 401
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
RT G+ L + L++ Y K G I A
Sbjct: 402 RT--------------------------------GLIDLKIALSNGLVNMYAKCGAIDKA 429
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSS 424
R+F L RD V+W ++ +QNG + A+ + M+R+G P+N+ + LS +S
Sbjct: 430 SRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNY-CMMRQGCISPSNFAAISGLSSCAS 488
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L L G+Q+H A++ G SVSNAL+ MY G + + +FN + + VSW S
Sbjct: 489 LRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMA-EHDIVSWNS 547
Query: 485 MI-VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
++ V ++ H E++++F M+ G+ P+ +T+V +L+A + ++E G++ + ++
Sbjct: 548 IMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKH 607
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS------------- 590
I+ A ++ ++G + +M D V+W S++S
Sbjct: 608 GAIEDNAVDNA-LMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMD 666
Query: 591 ----------------------ACRVHKNLDLG--------KIAAEKLLLIEPDNSGAYS 620
AC L+ G + E +++E S
Sbjct: 667 CVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVE-------S 719
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
AL ++YS CG+ + A+ + SM + FSW + + R +
Sbjct: 720 ALLDMYSKCGRIDYASKVFNSM-----SQKNEFSWNSMISGY-----------ARHGLGE 763
Query: 681 KMAKIWDEIKEMGFVPD 697
K +I++E++ G PD
Sbjct: 764 KALEIFEEMQRNGACPD 780
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 225/517 (43%), Gaps = 107/517 (20%)
Query: 10 ISPLEFYA-HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
ISP F A L S R G+ VH +K GL L + N+L+ Y + S +
Sbjct: 472 ISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESW 531
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
++F+ M + SWN+I+ V + P +SV
Sbjct: 532 EIFNSMAEHDIVSWNSIMGVM-----------VSSHAPTAESV----------------- 563
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+F M++ + P + T ++L++ + L L GK+VH+ V+K G V N+L++
Sbjct: 564 --EVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMS 621
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
YAK GD + +F M SGR RD V+WNSM
Sbjct: 622 CYAKSGDMDSCEQLFSSM-----------------SGR-------------RDAVSWNSM 651
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+GY NG+ E + M+ + + D T + L+ACA++ L+ G ++HA+ IR++
Sbjct: 652 ISGYIYNGHLQETMDCVWLMMHSNQML-DCCTFSIVLNACASVAALERGMEMHAFGIRSQ 710
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
++ V +AL+ Y+K G ++ A K +
Sbjct: 711 LESDVVVESALLDMYSKCGRIDYASK---------------------------------V 737
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+S+ ++ +W +M+ GY ++GL + A+E+F M R G P++ T ++LS S +
Sbjct: 738 FNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLV 797
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
D G G + + +I + +AG + + N + + T+ W +++VA
Sbjct: 798 DRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVA 857
Query: 489 LAQH------GLGEEAIQLFERMLELGIKPDH-ITYV 518
Q LG+EA RML L ++P + + YV
Sbjct: 858 CRQSKDGDRIDLGKEA----SRML-LELEPQNPVNYV 889
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 176/387 (45%), Gaps = 79/387 (20%)
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G+ +A +++H +VK GL+ + ++N L+N+YAK A+ VFDGM +N SW +V
Sbjct: 70 GEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
S ++ SG D A F M+ W G +F +P
Sbjct: 130 SGYVLSGITDEAFRVFKAML------W---------EGSEFS--------------RPTP 160
Query: 279 FTLASTLSAC--ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
FT S L AC A + L Q+H + +T + + V NALIS Y
Sbjct: 161 FTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMY------------- 207
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
G +G A+++FD+ RD++ W A++ Y + G
Sbjct: 208 ------------------GNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVST 249
Query: 397 VELFRSMVREGP----KPNNYTLSAMLSVSSSLASLDHG--KQIHASALRSGEASSLSVS 450
LF +M+ + +PN +T ++++ ++SL+S G Q+ A L+SG +S L V
Sbjct: 250 FTLFMAMLHDDSAIELRPNEHTFGSLIT-ATSLSSCSSGVLDQVFARVLKSGSSSDLYVG 308
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+AL++ +++ G ++ A+ +F + R V+ +IV L + EEA+ +F +G
Sbjct: 309 SALVSAFARHGMLDEAKDIFINLKERN-AVTLNGLIVGLVKQHCSEEAVGIF-----MGT 362
Query: 511 KPDHI----TYVGVLTACTHGGLVEQG 533
+ + T+V +L+A + E G
Sbjct: 363 RDSFVVNTDTFVVLLSAVAEFSIPEDG 389
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+++H ++ G L +SN L+ +Y+K + AAR+VF+ + R VSWT ++
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERN-AVSWTCLVSGYVL 134
Query: 492 HGLGEEAIQLFERMLELG---IKPDHITYVGVLTACTHGG---LVEQGQRYYNMMKNVHK 545
G+ +EA ++F+ ML G +P T+ VL AC G L Q + + K ++
Sbjct: 135 SGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYA 194
Query: 546 IKPTPSHFASMVDLLGRA--GLLQEAYNFIENMPLEPDVVAWGSLLS 590
T + +++ + G GL +A + P+ D++ W +L+S
Sbjct: 195 SNTTVCN--ALISMYGNCSVGLPLQAQQVFDTTPVR-DLITWNALMS 238
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 265/766 (34%), Positives = 406/766 (53%), Gaps = 108/766 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H I GL +F+ +L++ Y VK C
Sbjct: 29 GRAIHRHAIHAGLQADLFVSTALLDMY-----------------VKCAC----------- 60
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR--MFVEMVQDQVLPTQFTVT 149
L A +F MP RD V+W ++ Y G + +A+ + ++M ++ P T+
Sbjct: 61 ---LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 117
Query: 150 SVLASCTALGDLSAGKKVHSFVV----------KTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++L G L+ G VH++ + K+ L+ V + +LL+MYAK G + A
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ VF D M R+ VTW+++I G+
Sbjct: 178 RRVF-------------------------------DAMPARNEVTWSALIGGFVLCSRMT 206
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+A +F ML ++AS L ACA+L+ L++G+Q+HA + ++ A GN+L
Sbjct: 207 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 266
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+S YA K G I A +FD + +D V+
Sbjct: 267 LSMYA---------------------------------KAGLIDQAIALFDEMAVKDTVS 293
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
++A++ GY QNG ++A +F+ M +P+ T+ +++ S LA+L HG+ H S +
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
G AS S+ NALI MY+K G I+ +R+VFN++ R + VSW +MI HGLG+EA
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEAT 412
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF M LG PD +T++ +L+AC+H GLV +G+ ++++M + + + P H+ MVDL
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDL 472
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
L R G L EAY FI++MPL DV W +LL ACRV+KN+DLGK + + + P+ +G +
Sbjct: 473 LSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNF 532
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+YS+ G++++AA +R K G KK+ G SW++I +H F D HPQ IY
Sbjct: 533 VLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIY 592
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
++ I IK++G+ PDT+ VL D+EE+ KE+ L HSEKLAIA+G++S E+ T+ +
Sbjct: 593 RELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVT 652
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH+ IK I + R I+VRDA RFHHFK G CSC D+W
Sbjct: 653 KNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 233/489 (47%), Gaps = 74/489 (15%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ +V P +T L +C+AL D G+ +H + GL + V+ +LL+MY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F M +++ +W N+M+AGY+ +
Sbjct: 61 LPDAAHIFATMPARDLVAW-------------------------------NAMLAGYAHH 89
Query: 256 GYDFEALGMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G A+ +M ++ L+P+ TL + L A L G +HAY IR P
Sbjct: 90 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLH---P 146
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
N+ K+ + V+ T LLD Y K G + ARR+FD++
Sbjct: 147 NRNS-------------KSKLTD-------GVLLGTALLDMYAKCGSLLYARRVFDAMPA 186
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL---ASLDH- 430
R+ V W+A++ G+ A LF++M+ +G + S++S+L ASLDH
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHL 241
Query: 431 --GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+Q+HA +SG + L+ N+L++MY+KAG I+ A +F+ + + +TVS+++++
Sbjct: 242 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSG 300
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
Q+G EEA +F++M ++PD T V ++ AC+H ++ G+ + + + +
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLAS 359
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
S +++D+ + G + + MP D+V+W ++++ +H LGK A
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIH---GLGKEATA-- 413
Query: 609 LLIEPDNSG 617
L +E +N G
Sbjct: 414 LFLEMNNLG 422
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 63/260 (24%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA + K G+H + NSL++ YAK I A +FDEM VK S++ ++S Y
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ GR + A +F +M V P T+ S
Sbjct: 303 QNGRAE-------------------------------EAFLVFKKMQACNVEPDAATMVS 331
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+ L L G+ H V+ GL+ ++ N+L++MYAK G +++ VF+ M ++
Sbjct: 332 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 391
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ S WN+MIAGY +G EA +F M
Sbjct: 392 IVS-------------------------------WNTMIAGYGIHGLGKEATALFLEM-N 419
Query: 271 DSSLKPDKFTLASTLSACAN 290
+ PD T LSAC++
Sbjct: 420 NLGFPPDGVTFICLLSACSH 439
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/561 (41%), Positives = 352/561 (62%), Gaps = 8/561 (1%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
GRLD + F+ E +V +++++I + Q+ A G ++ ML ++P+ FT +S
Sbjct: 93 GRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQML-SCGVEPNAFTFSSV 151
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L +C+ L+ GK +H I+ + V L+ YA+ G V A+++ ++ +
Sbjct: 152 LKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDK--MPER 205
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
++++ TT+L Y K+G++ AR +F+ +++RDVV W M+ GY Q+G+ ++++LFR M+
Sbjct: 206 SLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRML 265
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
PN T+ A+LS L +L+ G+ IH+ G ++ V ALI MYSK G++
Sbjct: 266 VAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLE 325
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AR VF+ I ++ V+W SMIV A HG + A+QLFE M E G KP IT++G+L+AC
Sbjct: 326 DARLVFDRIR-DKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSAC 384
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
HGGLVE+G+ ++ +M++ + I+P H+ MV+LLGRAG L+EAY ++NM + D V
Sbjct: 385 GHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVL 444
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
WG+LL CR+H N+ LG+ A+ L+ + NSG Y L N+Y++ G WE A +R MK
Sbjct: 445 WGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKE 504
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
G++K G S +++ NKVH F + HP+ IY + +I +K G+ P T VLHD
Sbjct: 505 HGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHD 564
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+ E+ KEQ L HSEKLAIAFGLIST TT++I+KNLRVC+DCH+ +K I ++ R+IV
Sbjct: 565 LREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIV 624
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
+RD RFHHF+ GLCSC DYW
Sbjct: 625 MRDRNRFHHFEDGLCSCGDYW 645
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 229/500 (45%), Gaps = 86/500 (17%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E SLI + AHLLQ +HA +++ GL+ N ++NF
Sbjct: 46 EVERFASLIDKSKSVAHLLQ-------------IHASLLRRGLY-----HNPILNF---- 83
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ +YA GRLD + VFN + S++ II ++
Sbjct: 84 ----------------------KLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHV 121
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+ F A + +M+ V P FT +SVL SC+ L +GK +H +K GL +
Sbjct: 122 QSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLY 177
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V L+++YA+ GD + A+ +FD M +++ S +++ + G LD AR+ F+ M ERD
Sbjct: 178 VRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERD 237
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
VV WN MI GY+Q+G E+L +F ML ++ P++ T+ + LSAC L L+ G+ IH
Sbjct: 238 VVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI-PNEVTVLAVLSACGQLGALESGRWIH 296
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+YI VG ALI Y+K G +E
Sbjct: 297 SYIENKGIQINVHVGTALIDMYSKCGSLE------------------------------- 325
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
AR +FD +RD+DVVAW +M+VGY +G ++ A++LF M G KP + T +LS
Sbjct: 326 --DARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSA 383
Query: 422 SSSLASLDHGKQIHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
++ G+ + G + ++ + +AG++ A + + + V
Sbjct: 384 CGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPV 443
Query: 481 SWTSMIVALAQH---GLGEE 497
W +++ H LGEE
Sbjct: 444 LWGTLLGCCRLHVNIKLGEE 463
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 103/276 (37%), Gaps = 74/276 (26%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
S+ H QIHAS LR G + ++ L Y+ G ++ + VFN S++++I
Sbjct: 59 SVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD-EPNVFSFSAII 117
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT--------------------- 525
+ Q L + A + +ML G++P+ T+ VL +C+
Sbjct: 118 HSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLY 177
Query: 526 -HGGLVEQGQRYYNMMKNVHKIKPTPSH----FASMVDLLGRAGLLQEAYNFIENMPLEP 580
GLV+ R +++ P +M+ + G L +A + E M E
Sbjct: 178 VRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMK-ER 236
Query: 581 DVVAWG-----------------------------------SLLSACRVHKNLDLGKIAA 605
DVV W ++LSAC LG + +
Sbjct: 237 DVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACG-----QLGALES 291
Query: 606 EKLLLIEPDNSGAY------SALCNLYSSCGKWEDA 635
+ + +N G +AL ++YS CG EDA
Sbjct: 292 GRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDA 327
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 258/771 (33%), Positives = 404/771 (52%), Gaps = 98/771 (12%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A L++S + ++ +G+ HA+IIK L N L +F
Sbjct: 10 ASLVESAVSTQCSRLGRAAHAQIIKT-------LDNPLPSFI------------------ 44
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+N +++ Y+K R + A + +L PNR V+WT +I + GRF +A+ F M
Sbjct: 45 -----YNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNM 99
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+D + P FT + +L GK+VH+ VK G V V S +MY+K
Sbjct: 100 RRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSK---- 155
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
+G + AR FD+M ER++ TWN+ ++ G
Sbjct: 156 ---------------------------AGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+AL F + +P+ T + L+ACA L+LG+Q+H +++++ F+A V
Sbjct: 189 RYDDALTAFIE-FRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVA 247
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI D Y K +G + IF + +
Sbjct: 248 NGLI---------------------------------DFYGKCHQVGCSEIIFSGISKPN 274
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V+W +M+V Y QN + A +F +EG +P ++ +S++LS + L+ L+ GK +H
Sbjct: 275 DVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHT 334
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+++ ++ V +AL+ MY K G+I A R F+ + R V+W +MI A G +
Sbjct: 335 LAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN-LVTWNAMIGGYAHQGQAD 393
Query: 497 EAIQLFERML--ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
A+ LF+ M + P+++T+V VL+AC+ G V G + M+ + I+P H+A
Sbjct: 394 MAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYA 453
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGRAG++++AY FI+ MP+ P V WG+LL A ++ +LGK+AA+ L ++P
Sbjct: 454 CVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPL 513
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+SG + L N++++ G+WE+A +RK MK VG+KK G SW+ N VHVF +D H +
Sbjct: 514 DSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHER 573
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
I +AK+ E++ G++PDT+ L D+EE+ K + +HSEK+A+AFGLIS P
Sbjct: 574 NSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGV 633
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLR+C DCHSAIKFI +V REI+VRD FH F+ CSCRDYW
Sbjct: 634 PIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS-VSNALITMYSKAGNINAARR 468
PN+ +VS+ + L G+ HA +++ + S + N L+ MYSK N+A+
Sbjct: 6 PNSLASLVESAVSTQCSRL--GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL 63
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+ +L R V+WT++I Q+G A+ F M I+P+ T+ A G
Sbjct: 64 LLSLTPNRS-VVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKA--SGS 120
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFA------SMVDLLGRAGLLQEAYNFIENMPLEPDV 582
L R + K VH + + S D+ +AGL +EA + MP E ++
Sbjct: 121 L-----RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNI 174
Query: 583 VAWGSLLS 590
W + LS
Sbjct: 175 ATWNAYLS 182
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 272/811 (33%), Positives = 419/811 (51%), Gaps = 123/811 (15%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRN---PFV------------GKLVHARIIKCGLHL 46
+ +P + L Y +L+ + N PF G+ +H I GL
Sbjct: 99 SSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQA 158
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
+F+ +L++ Y VK C L A +F MP
Sbjct: 159 DLFVSTALLDMY-----------------VKCAC--------------LPDAAHIFATMP 187
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIR--MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
RD V+W ++ Y G + +A+ + ++M ++ P T+ ++L G L+ G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247
Query: 165 KKVHSFVV----------KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
VH++ + K+ L+ V + +LL+MYAK G + A+ VF
Sbjct: 248 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVF----------- 296
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
D M R+ VTW+++I G+ +A +F ML
Sbjct: 297 --------------------DAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 336
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
++AS L ACA+L+ L++G+Q+HA + ++ A GN+L+S YA
Sbjct: 337 FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA---------- 386
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
K G I A +FD + +D V+++A++ GY QNG +
Sbjct: 387 -----------------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A +F+ M +P+ T+ +++ S LA+L HG+ H S + G AS S+ NALI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+K G I+ +R+VFN++ R + VSW +MI HGLG+EA LF M LG PD
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+T++ +L+AC+H GLV +G+ ++++M + + + P H+ MVDLL R G L EAY FI+
Sbjct: 543 VTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQ 602
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
+MPL DV W +LL ACRV+KN+DLGK + + + P+ +G + L N+YS+ G++++
Sbjct: 603 SMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDE 662
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
AA +R K G KK+ G SW++I +H F D HPQ IY ++ I IK++G+
Sbjct: 663 AAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
PDT+ VL D+EE+ KE+ L HSEKLAIA+G++S E+ T+ + KNLRVC DCH+ IK
Sbjct: 723 QPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKH 782
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I + R I+VRDA RFHHFK G CSC D+W
Sbjct: 783 ISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 253/534 (47%), Gaps = 76/534 (14%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA--IRMFVEMVQDQVLPTQFTVTS 150
G L A +F+ +P+ D ++ +I Y+ A + ++ M++ +V P +T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L +C+AL D G+ +H + GL + V+ +LL+MY K A +F M ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM-L 269
+ +W N+M+AGY+ +G A+ +M +
Sbjct: 191 LVAW-------------------------------NAMLAGYAHHGMYHHAVAHLLSMQM 219
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ L+P+ TL + L A L G +HAY IR P N+
Sbjct: 220 QMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLH---PNRNS----------- 265
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
K+ + V+ T LLD Y K G + ARR+FD++ R+ V W+A++ G+
Sbjct: 266 --KSKLTD-------GVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL---ASLDH---GKQIHASALRSGE 443
A LF++M+ +G + S++S+L ASLDH G+Q+HA +SG
Sbjct: 317 CSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGV 371
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ L+ N+L++MY+KAG I+ A +F+ + + +TVS+++++ Q+G EEA +F+
Sbjct: 372 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M ++PD T V ++ AC+H ++ G+ + + + + S +++D+ +
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKC 489
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
G + + MP D+V+W ++++ +H LGK A L +E +N G
Sbjct: 490 GRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIH---GLGKEATA--LFLEMNNLG 537
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 15/247 (6%)
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK--DAVELFRSMVREGPKPNNY 413
+I G + A +FD + DV + ++ Y + D + L+R M+R PNNY
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T L S+LA G+ IH A+ +G + L VS AL+ MY K + A +F +
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAI-QLFERMLELG-IKPDHITYVGVLTACTHGGLVE 531
R + V+W +M+ A HG+ A+ L +++ ++P+ T V +L G +
Sbjct: 187 PAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALA 245
Query: 532 QGQ--RYYNMMKNVHKIKPTPSHF-------ASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
QG Y + +H + + S +++D+ + G L A + MP +V
Sbjct: 246 QGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV 305
Query: 583 VAWGSLL 589
W +L+
Sbjct: 306 T-WSALI 311
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/715 (36%), Positives = 392/715 (54%), Gaps = 75/715 (10%)
Query: 81 SWNTILSAYAKQGRLDLACEVF-NLMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
++N +LS YA+ G + A +F P R D V+W T++ + G F A++ +MV
Sbjct: 205 AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVA 264
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEM 197
V P T S L +C+ L L G+++H++V+K L+ V ++L++MYA
Sbjct: 265 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT----- 319
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE--RDVVTWNSMIAGYSQN 255
H G+ AR FD + + + + WN+MI GY+Q
Sbjct: 320 -----------------------HEQVGK---ARQVFDMVPDSGKQLGMWNAMICGYAQA 353
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL +FA M ++ P + T+AS L ACA E + +H Y+++ V
Sbjct: 354 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 413
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+ YA++G ++ ARRIF +
Sbjct: 414 QNALMDMYARLGKTDV---------------------------------ARRIFAMVDLP 440
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVR---EGPKPNNYTLSAMLSVSSSLASLDHGK 432
DVV+W ++ G G DA +L R M + G PN TL +L + LA+ GK
Sbjct: 441 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 500
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH A+R + ++V +AL+ MY+K G + +R VF+ + R+ T++W +I+A H
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMH 559
Query: 493 GLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
GLG EA LF+RM G +P+ +T++ L AC+H G+V++G + ++ M+ H ++PTP
Sbjct: 560 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 619
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPL-EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
A +VD+LGRAG L EAY + +M E V AW ++L ACR+H+N+ LG+IA E+LL
Sbjct: 620 ILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLE 679
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EP+ + Y LCN+YS+ G+W AA +R M+ GV K G SW+++ +H F +
Sbjct: 680 LEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGES 739
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HP + ++ M +W E+ G+ PDT+ VLHD+++ K +LR HSEKLAIAFGL+
Sbjct: 740 AHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRA 799
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLRVCNDCH A KF+ K+V REIV+RD RFHHF+ G CSC DYW
Sbjct: 800 APGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/715 (36%), Positives = 392/715 (54%), Gaps = 75/715 (10%)
Query: 81 SWNTILSAYAKQGRLDLACEVF-NLMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
++N +LS YA+ G + A +F P R D V+W T++ + G F A++ +MV
Sbjct: 207 AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVA 266
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEM 197
V P T S L +C+ L L G+++H++V+K L+ V ++L++MYA
Sbjct: 267 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT----- 321
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE--RDVVTWNSMIAGYSQN 255
H G+ AR FD + + + + WN+MI GY+Q
Sbjct: 322 -----------------------HEQVGK---ARQVFDMVPDSGKQLGMWNAMICGYAQA 355
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL +FA M ++ P + T+AS L ACA E + +H Y+++ V
Sbjct: 356 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 415
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+ YA++G ++ ARRIF +
Sbjct: 416 QNALMDMYARLGKTDV---------------------------------ARRIFAMVDLP 442
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVR---EGPKPNNYTLSAMLSVSSSLASLDHGK 432
DVV+W ++ G G DA +L R M + G PN TL +L + LA+ GK
Sbjct: 443 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 502
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH A+R + ++V +AL+ MY+K G + +R VF+ + R+ T++W +I+A H
Sbjct: 503 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMH 561
Query: 493 GLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
GLG EA LF+RM G +P+ +T++ L AC+H G+V++G + ++ M+ H ++PTP
Sbjct: 562 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 621
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPL-EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
A +VD+LGRAG L EAY + +M E V AW ++L ACR+H+N+ LG+IA E+LL
Sbjct: 622 ILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLE 681
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EP+ + Y LCN+YS+ G+W AA +R M+ GV K G SW+++ +H F +
Sbjct: 682 LEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGES 741
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HP + ++ M +W E+ G+ PDT+ VLHD+++ K +LR HSEKLAIAFGL+
Sbjct: 742 AHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRA 801
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLRVCNDCH A KF+ K+V REIV+RD RFHHF+ G CSC DYW
Sbjct: 802 APGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 263/771 (34%), Positives = 396/771 (51%), Gaps = 101/771 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA + + R+ G ++H + I G + L ++++ Y K + A+KVFD MP
Sbjct: 122 YAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K WNT++S Y K + +VF + N T
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT------------------- 222
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
T+ +L + L +L G ++HS KTG V +++Y+K G
Sbjct: 223 -----------TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MA +F R ++ ++N +MI GY+ N
Sbjct: 272 IKMASTLFREFRRPDIVAYN-------------------------------AMIHGYTSN 300
Query: 256 GYDFEALGMFAN-MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G +L +F ML + LK TL S + + L L IH Y +++ F +
Sbjct: 301 GETELSLSLFKELMLSGAKLKSS--TLVSLVPVSGH---LMLIYAIHGYSLKSNFLSHTS 355
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V AL + Y+K+ +E AR++FD +
Sbjct: 356 VSTALTTVYSKLNEIE---------------------------------SARKLFDESPE 382
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+ + +W AM+ GY QNGL +DA+ LFR M PN T++ +LS + L +L GK +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H + SS+ VS ALI MY+K G+I ARR+F+ + + E V+W +MI HG
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNE-VTWNTMISGYGLHGH 501
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G+EA+ +F ML GI P +T++ VL AC+H GLV++G +N M + + +P+ H+A
Sbjct: 502 GQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VD+LGRAG LQ A FIE MP++P W +LL ACR+HK+ +L + +EKL ++PD
Sbjct: 562 CVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N G + L N++S+ + AA +R++ K + K G++ ++I HVF D HPQ
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
AI+ K+ K+ +++E G+ P+T LHDVEE+ +E M++ HSE+LAIAFGLI+T T
Sbjct: 682 VKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 741
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLRVC DCH+A K I K+ +R IVVRDA RFHHFK G+CSC DYW
Sbjct: 742 EIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 191/447 (42%), Gaps = 68/447 (15%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + AR F + DV +N ++ G+S N +L +FA++ K + LKP+ T A
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFA 125
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+SA + + G IH I D+ +G+ ++ Y K VE A
Sbjct: 126 ISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDA------------ 173
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
R++FD + ++D + W M+ GY +N + +++++FR ++
Sbjct: 174 ---------------------RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 405 REG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
E + + TL +L + L L G QIH+ A ++G S V I++YSK G I
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A +F R + V++ +MI +G E ++ LF+ ++ G K T V ++
Sbjct: 273 KMASTLFREFR-RPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPV 331
Query: 524 CTHGGLVEQGQRY----------------------YNMMKNVHKI------KPTPSHFAS 555
H L+ Y N +++ K+ K PS + +
Sbjct: 332 SGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS-WNA 390
Query: 556 MVDLLGRAGLLQEA---YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
M+ + GL ++A + ++N P+ V +LSAC L LGK + + +
Sbjct: 391 MISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 613 PDNSGAYS-ALCNLYSSCGKWEDAANI 638
++S S AL +Y+ CG +A +
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRL 477
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 42/242 (17%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
+PNP ++ L A L +L GK VH + S+++ +L+ YAK
Sbjct: 417 SPNPVTITCILSACAQLGALSL-------GKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
SI+ A+++FD MP K +WNT++S Y
Sbjct: 470 SIAEARRLFDFMPKKNEVTWNTMISGYGLH------------------------------ 499
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVN 181
G + A+ +F EM+ + PT T VL +C+ G + G ++ +S + + G V
Sbjct: 500 -GHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVV-SLHIHSGRLDLARAQFDQMIE 239
++++ + G A + M ++ S W ++ + IH +LAR +++ E
Sbjct: 559 HYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDT-NLARTVSEKLFE 617
Query: 240 RD 241
D
Sbjct: 618 LD 619
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/708 (35%), Positives = 383/708 (54%), Gaps = 66/708 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C NT+LS Y+ GR A +F MP RD +SW +++ Y + GR A+++F EM+
Sbjct: 296 ICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLW 355
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ T TS LA+C + GK +H FVV GL + + N+L+ Y K
Sbjct: 356 MKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAE 415
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
AK VF +M + D VTWN++I G++ N
Sbjct: 416 AKKVFQ-------------------------------RMPKLDKVTWNALIGGFANNAEL 444
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL-KLGKQIHAYIIRTEFDATGPVGN 317
EA+ F M + S+ D T+ + L +C E L K G IHA+ + T FD V +
Sbjct: 445 NEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQS 504
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YAK G D+ + IFD L +
Sbjct: 505 SLITMYAKCG---------------------------------DLHSSSYIFDQLVFKTS 531
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
W A++ + G ++A++L M G + + + S LSV++ LA L+ G+Q+H S
Sbjct: 532 SVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGS 591
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
++ G + NA + MY K G ++ A R+ R +SW ++I A+HG +
Sbjct: 592 TIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSR-LSWNTLISISARHGQFHK 650
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A + F ML+LG+KP+H+++V +L+AC+HGGLV++G YY M +V+ I+P H M+
Sbjct: 651 AKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMI 710
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGR+G L EA FI MP+ P+ + W SLL++CR+++NLDLG+ AA+ LL ++P +
Sbjct: 711 DLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDS 770
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY N++++ G+WED ++R M ++K SWV+ + + +FG+ D HPQ +
Sbjct: 771 AYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQ 830
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
I K+ + + E G+VPDT+ L D +E+ KE + HSE++A+AFGLI+ PE +T+R
Sbjct: 831 INGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVR 890
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLRVC DCHS KF+ ++ R+IV+RD RFHHF G CSC DYW
Sbjct: 891 IFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/548 (24%), Positives = 242/548 (44%), Gaps = 72/548 (13%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y+K GR++ A VF+ M R+ SW ++ Y +G + A+ F ++ + P+ F +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 149 TSVLASCTALGDLSA-GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
S++ +C ++ G + H F +K GL V V S ++ YA G
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYG------------- 108
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+VS A+ F++M +R+VV+W S++ YS NG E + +
Sbjct: 109 ---------IVSN---------AQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKR 150
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + + ++ +A +S+C L + LG Q+ + ++ + N+LI + G
Sbjct: 151 M-RHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMF---G 206
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
G GDI A IF+ + +RD ++W +++
Sbjct: 207 GC------------------------------GDINEACSIFNEMNERDTISWNSIISAN 236
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QN L++++ F M + N TLS +LS+ S+ L GK +H A++ G S++
Sbjct: 237 AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI 296
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ N L+++YS AG A +F + R + +SW SM+ Q G A+++F ML
Sbjct: 297 CLCNTLLSVYSDAGRSKDAELIFRRMPER-DLISWNSMLACYVQDGRCLCALKVFAEMLW 355
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+ + +++T+ L AC G+ + + V ++ +++ G+ +
Sbjct: 356 MKKEINYVTFTSALAACLDPEFFTNGKILHGFVV-VLGLQDELIIGNTLITFYGKCHKMA 414
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA-YSALCNLY 626
EA + MP + D V W +L+ N +L + A L+ E SG Y + N+
Sbjct: 415 EAKKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNIL 471
Query: 627 SSCGKWED 634
SC ED
Sbjct: 472 GSCLTHED 479
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/578 (24%), Positives = 254/578 (43%), Gaps = 92/578 (15%)
Query: 39 IIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLA 98
I CG + + L + L+ +A K E V N+++ + G ++ A
Sbjct: 167 ISSCGFLMDIILGHQLL---------GHALKFGLETKVSAA---NSLIFMFGGCGDINEA 214
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF--VEMVQDQVLPTQFTVTSVLASCT 156
C +FN M RD++SW +II + + + R F + +V +++ T T++ +L+ C
Sbjct: 215 CSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYT--TLSILLSICG 272
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
++ L GK VH VK GL + + N+LL++Y+ G A+ +F M +++ SWN
Sbjct: 273 SVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNS 332
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+++ ++ GR A F +M+ W Y
Sbjct: 333 MLACYVQDGRCLCALKVFAEML------WMKKEINY------------------------ 362
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
T S L+AC + E GK +H +++ +GN LI+ Y K K+
Sbjct: 363 --VTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGK------CHKMA 414
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
E A+++F + D V W A++ G+ N +A
Sbjct: 415 E---------------------------AKKVFQRMPKLDKVTWNALIGGFANNAELNEA 447
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLD---HGKQIHASALRSGEASSLSVSNAL 453
V F+ M REG ++ + + S L D +G IHA + +G V ++L
Sbjct: 448 VAAFKLM-REGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSL 506
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
ITMY+K G+++++ +F+ + ++ +V W ++I A A++G GEEA++L RM GI+ D
Sbjct: 507 ITMYAKCGDLHSSSYIFDQLVFKTSSV-WNAIIAANARYGFGEEALKLVVRMRSAGIEFD 565
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYN 571
+ L+ ++E+GQ+ + + K+ HF + +D+ G+ G L +A
Sbjct: 566 QFNFSTALSVAADLAMLEEGQQLHG---STIKLGFELDHFIINAAMDMYGKCGELDDALR 622
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
+ P + ++W +L+S H K +L
Sbjct: 623 ILPQ-PTDRSRLSWNTLISISARHGQFHKAKETFHDML 659
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 216/504 (42%), Gaps = 99/504 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G H IKCGL VF+ S ++FYA +S A+K+F+E
Sbjct: 78 GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE------------------ 119
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
MP+R+ VSWT+++V+Y++ G K I + M + + + + V
Sbjct: 120 -------------MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALV 166
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
++SC L D+ G ++ +K GL V+ NSL+ M+ GD A ++F+ M ++
Sbjct: 167 ISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDT 226
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW NS+I+ +QN E+ F + ++
Sbjct: 227 ISW-------------------------------NSIISANAQNTLHEESFRYF-HWMRL 254
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ + TL+ LS C +++ LK GK +H ++ ++ + N L+S Y+ G +
Sbjct: 255 VHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSK- 313
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A IF + +RD+++W +ML Y Q+G
Sbjct: 314 --------------------------------DAELIFRRMPERDLISWNSMLACYVQDG 341
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
A+++F M+ + N T ++ L+ +GK +H + G L + N
Sbjct: 342 RCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGN 401
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LIT Y K + A++VF + + + V+W ++I A + EA+ F+ M E
Sbjct: 402 TLITFYGKCHKMAEAKKVFQRMP-KLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTS 460
Query: 512 P-DHITYVGVLTAC-THGGLVEQG 533
D+IT V +L +C TH L++ G
Sbjct: 461 GVDYITIVNILGSCLTHEDLIKYG 484
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 210/530 (39%), Gaps = 113/530 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK++H ++ GL + + N+L+ FY K ++ AKKVF MP +WN ++ +A
Sbjct: 381 GKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFAN 440
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
L+ A F LM R+ +T V Y T+ ++
Sbjct: 441 NAELNEAVAAFKLM--REG---STSGVDY-------------------------ITIVNI 470
Query: 152 LASCTALGDL-SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L SC DL G +H+ V TG +V +SL+ MYAK GD + +FD + K
Sbjct: 471 LGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKT 530
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
S WN + IA ++ G+ EAL + M +
Sbjct: 531 SSVWNAI-------------------------------IAANARYGFGEEALKLVVRM-R 558
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ ++ D+F ++ LS A+L L+ G+Q+H I+ F+ + NA + Y K G ++
Sbjct: 559 SAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELD 618
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A +I+ Q DR ++W ++ ++
Sbjct: 619 DALRILPQP---------------------------------TDRSRLSWNTLISISARH 645
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSV 449
G A E F M++ G KPN+ + +LS S +D G +AS G +
Sbjct: 646 GQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEH 705
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERML 506
+I + ++G + A + + W S++ + + LG +A + +L
Sbjct: 706 CVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAK---HLL 762
Query: 507 ELGIKPD--HITYVGVLTACTHGGLVE--QGQRYYNMMKNVHKIKPTPSH 552
EL D ++ Y V VE +GQ HKI+ P+H
Sbjct: 763 ELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQM------GAHKIQKKPAH 806
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK G IN A+ VF+ + R E SW M+ + G EA+ F + +GIKP
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEA-SWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGF 59
Query: 516 TYVGVLTACTHGGLV-EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
++TAC ++ ++G +++ I S V G++ A
Sbjct: 60 MIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVG-TSFVHFYASYGIVSNAQKMFN 118
Query: 575 NMPLEPDVVAWGSLL 589
MP + +VV+W SL+
Sbjct: 119 EMP-DRNVVSWTSLM 132
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/569 (41%), Positives = 350/569 (61%), Gaps = 38/569 (6%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+VSL S + A F + +V TWN++I GY+++ A +F + S ++P
Sbjct: 61 IVSL---SAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAF-LFYRQMVVSCVEP 116
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D T L A + ++ G+ IH+ IR F++ V N+L+ YA G
Sbjct: 117 DTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACG--------- 167
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
D A ++F+ +++RD+VAW +M+ G+ NG +A
Sbjct: 168 ------------------------DTESAYKVFELMKERDLVAWNSMINGFALNGRPNEA 203
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ LFR M EG +P+ +T+ ++LS S+ L +L+ G+++H L+ G + + V+N+L+ +
Sbjct: 204 LTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDL 263
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y+K G I A+RVF+ + R VSWTS+IV LA +G GEEA++LF+ M G+ P IT
Sbjct: 264 YAKCGAIREAQRVFSEMSERN-AVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEIT 322
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+VGVL AC+H G++++G Y+ MK I P H+ MVDLL RAGL+++AY +I+NM
Sbjct: 323 FVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 382
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P++P+ V W +LL AC +H +L LG+IA LL +EP +SG Y L NLY+S +W D
Sbjct: 383 PVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQ 442
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
IR+SM GVKKT G+S V++ N+V+ F + D HPQ +Y + KI + +K G+VP
Sbjct: 443 VIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVP 502
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
TA+VL D+EE+ KEQ L +HSEK+AIAF L++TP T +R+MKNLRVC DCH AIK I
Sbjct: 503 HTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIA 562
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K+ DREIV+RD +RFHHF+ G CSC+DYW
Sbjct: 563 KIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 186/434 (42%), Gaps = 74/434 (17%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
I + + + A VF ++ N + +W TII Y E A + +MV V P
Sbjct: 58 IFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPD 117
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T +L + + ++ G+ +HS ++ G V V NSLL++YA GD A VF+
Sbjct: 118 THTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFE 177
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M+ +++ +W NSMI G++ NG EAL +
Sbjct: 178 LMKERDLVAW-------------------------------NSMINGFALNGRPNEALTL 206
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + ++PD FT+ S LSA A L L+LG+++H Y+++ V N+L+ YA
Sbjct: 207 FREMSVE-GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYA 265
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G + AQ R+F + +R+ V+WT+++
Sbjct: 266 KCGAIREAQ---------------------------------RVFSEMSERNAVSWTSLI 292
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGE 443
VG NG ++A+ELF+ M +G P+ T +L S LD G + G
Sbjct: 293 VGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGI 352
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQ 500
+ ++ + S+AG + A + + V W +++ A H GLGE A
Sbjct: 353 IPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIA-- 410
Query: 501 LFERMLELGIKPDH 514
R L ++P H
Sbjct: 411 ---RSHLLNLEPKH 421
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 177/406 (43%), Gaps = 84/406 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL++ KS N G+ +H+ I+ G VF++NSL++ YA
Sbjct: 121 YPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAAC-------------- 166
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
G + A +VF LM RD V+W ++I + GR A+ +F E
Sbjct: 167 -----------------GDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFRE 209
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V P FTV S+L++ LG L G++VH +++K GLS +VTNSLL++YAK G
Sbjct: 210 MSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGA 269
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF +M ER+ V+W S+I G + N
Sbjct: 270 IREAQRVF-------------------------------SEMSERNAVSWTSLIVGLAVN 298
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN-------LEKLKLGKQIHAYIIRTE 308
G+ EAL +F M + L P + T L AC++ E + K+ I R E
Sbjct: 299 GFGEEALELFKEM-EGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIE 357
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL-----DGYIKIGDIG 363
++ ++ G V+ A + ++ + N + + TLL G++ +G+I
Sbjct: 358 HYG------CMVDLLSRAGLVKQAYEYIQNMPVQ-PNAVIWRTLLGACTIHGHLGLGEI- 409
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
AR +L + + + Y D + RSM+++G K
Sbjct: 410 -ARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVK 454
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/780 (32%), Positives = 421/780 (53%), Gaps = 100/780 (12%)
Query: 9 LISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHL---SVFLKNSLMNFYAKTESIS 65
L SP + LL+ ++N G+ +HA + + V NSL+N Y K + +S
Sbjct: 15 LASPHQDPIKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVS 74
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A+K+FD MP + + SW+ +++ Y + G EVF L
Sbjct: 75 IARKLFDSMPRRNVVSWSALMAGYMQNGN---PLEVFEL--------------------- 110
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
FK + V+D + P ++ + + ++SC + + GK+ H + +K+GL V N+
Sbjct: 111 FKKMV------VKDNIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNA 163
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+ +Y+K D A + L+ G D+ +
Sbjct: 164 LIQLYSKCSDVGAAIQI-----------------LYTVPG--------------NDIFCY 192
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N ++ G Q+ + EA+ + ++ ++ + T + CA+L+ + LGKQ+HA ++
Sbjct: 193 NLVVNGLLQHTHMAEAVDVL-KLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQML 251
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
+++ D +G+++I Y K G V L G
Sbjct: 252 KSDIDCDVYIGSSIIDMYGKCGNV-----------------------LSG---------- 278
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R FD L+ R+VV+WT+++ Y QN ++A+ LF M + PN YT++ + + ++ L
Sbjct: 279 RTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGL 338
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
++L G Q+HA A +SG ++ V NALI MY K+G+I AA+ VF+ + ++W ++
Sbjct: 339 SALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTC-CNIITWNAI 397
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I + HGLG+EA+ +F+ M+ G +P+++T++GV+ AC H LV++G Y+N + +
Sbjct: 398 ITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFR 457
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I P H+ +V LL R+G L EA NF+ + + DVV+W +LL+AC VHK+ D G+ A
Sbjct: 458 IVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIA 517
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
E LL +EP + G Y L N+++ +W+ IRK M+ VKK G SW++I+N HVF
Sbjct: 518 EYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVF 577
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
ED HP+ + IY + + +I+ +G+VPD +VLHD+E++ K L +HSEKLA+A+
Sbjct: 578 TSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAY 637
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GL+ TP + ++KNLR+C+DCH+AIK I K+ +R IVVRDA RFHHF+ G CSC DYW
Sbjct: 638 GLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/704 (35%), Positives = 392/704 (55%), Gaps = 69/704 (9%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+N +++ Y K GRL LA +VF+ MP+R+ VS ++ Y GR ++A+ + V D
Sbjct: 53 YNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALL--RVADFG 110
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
L ++ ++S +A+ + G++ H + +K GL+ V +++L+MY + A
Sbjct: 111 L-NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVK 169
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFD NVSS+NV +NSMI G+ G +
Sbjct: 170 VFD-----NVSSFNVF--------------------------AFNSMINGFLDRGQMDGS 198
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +M+++ + D + + L CA+ +++ LG Q+H ++ +
Sbjct: 199 TSIVRSMVRNVG-QWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLE----------- 246
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
LNV + L+D Y K A R+F+ L ++++V+WT
Sbjct: 247 ----------------------LNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWT 284
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
A++ Y QN L +DA++LF M EG +PN +T + L+ + LA+L +G + A +++
Sbjct: 285 AIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKT 344
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G L V NAL+ MYSK+G++ ARRVF + R + VSW S+I+ A HG EA++
Sbjct: 345 GHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSIIIGYAHHGRAREAMEA 403
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F ML P ++T++GVL+AC GLV++G Y N+M +KP H+ MV LL
Sbjct: 404 FHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLC 463
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L EA FIE+ + DVVAW SLLS+C+V++N LG AE++ ++P + G Y
Sbjct: 464 RVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVL 523
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ +W+ +R+ M+ +GV+K G SW+Q+ ++VHVF ED HP + I K
Sbjct: 524 LSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKK 583
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ D+IK +G+VP+ A LHDVE++ KE+ L +HSEKLA+AFGLI TP+ +RIMKN
Sbjct: 584 LQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKN 643
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+C+DCH AIK I R IVVRD RFH + G+CSC DYW
Sbjct: 644 VRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 224/496 (45%), Gaps = 82/496 (16%)
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G+LS GK VH+ VV+ A FD V +N ++
Sbjct: 30 GELSLGKAVHARVVRA--------------------------ARFD------VVQYNNLI 57
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
+L++ GRL LAR FD M R+ V+ N +++GY+ +G +AL +L+ + ++
Sbjct: 58 ALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALA----LLRVADFGLNE 113
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+ L+S ++A A++ +G+Q H Y I+ V +A++ Y + ++ A K+ +
Sbjct: 114 YVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDN 173
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+S NV AF ++++G++ G + +
Sbjct: 174 --VSSFNVFAFNSMINGFLDRGQM-------------------------------DGSTS 200
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
+ RSMVR + ++ + A+L +S + G Q+H AL+ ++ V +AL+ MY
Sbjct: 201 IVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYG 260
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K + A RVF ++ + VSWT+++ A Q+ L E+A+QLF M G++P+ TY
Sbjct: 261 KCDFPHEANRVFEVLP-EKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYA 319
Query: 519 GVLTACTHGGLVEQGQRY-YNMMKNVH-KIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
L +C ++ G MK H + P + +++++ ++G +++A +M
Sbjct: 320 VALNSCAGLATLKNGNALGACTMKTGHWGLLPVCN---ALMNMYSKSGSVEDARRVFLSM 376
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW---- 632
P DVV+W S++ H A +L E S Y + S+C +
Sbjct: 377 PCR-DVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPS--YVTFIGVLSACAQLGLVD 433
Query: 633 EDAANIRKSMKYVGVK 648
E + MK VGVK
Sbjct: 434 EGFYYLNIMMKEVGVK 449
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 35/267 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L ++ +G VH + +K L L+V++ ++L++ Y K + A +VF+ +P
Sbjct: 217 YVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLP 276
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW I++AY T NE+ F++A+++F++
Sbjct: 277 EKNIVSWTAIMTAY-----------------------------TQNEL--FEDALQLFLD 305
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V P +FT L SC L L G + + +KTG G + V N+L+NMY+K G
Sbjct: 306 MEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGS 365
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD----VVTWNSMIAG 251
A+ VF M ++V SWN ++ + H GR A F M+ + VT+ +++
Sbjct: 366 VEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSA 425
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDK 278
+Q G E M+K+ +KP K
Sbjct: 426 CAQLGLVDEGFYYLNIMMKEVGVKPGK 452
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 78/200 (39%), Gaps = 62/200 (31%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N+LMN Y+K+ S+ A++VF MP + + SWN+I+ YA GR A E F+ M
Sbjct: 354 NALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDM------ 407
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
+F E V P+ T VL++C LG + G + +
Sbjct: 408 --------------------LFAEEV-----PSYVTFIGVLSACAQLGLVDEGFYYLNIM 442
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA- 230
+K + K G E + +V L GRLD A
Sbjct: 443 MK--------------EVGVKPGKE----------------HYTCMVGLLCRVGRLDEAE 472
Query: 231 RAQFDQMIERDVVTWNSMIA 250
R I DVV W S+++
Sbjct: 473 RFIESNCIGTDVVAWRSLLS 492
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/715 (36%), Positives = 392/715 (54%), Gaps = 75/715 (10%)
Query: 81 SWNTILSAYAKQGRLDLACEVF-NLMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
++N +LS YA+ G + A +F P R D V+W T++ + G F A++ +MV
Sbjct: 205 AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVA 264
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEM 197
V P T S L +C+ L L G+++H++V+K L+ V ++L++MYA
Sbjct: 265 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT----- 319
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE--RDVVTWNSMIAGYSQN 255
H G+ AR FD + + + + WN+MI GY+Q
Sbjct: 320 -----------------------HEQVGK---ARQVFDMVPDSGKQLGMWNAMICGYAQA 353
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL +FA M ++ P + T+AS L ACA E + +H Y+++ V
Sbjct: 354 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 413
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+ YA++G ++ ARRIF +
Sbjct: 414 QNALMDMYARLGKTDV---------------------------------ARRIFAMVDLP 440
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVR---EGPKPNNYTLSAMLSVSSSLASLDHGK 432
DVV+W ++ G G DA +L R M + G PN TL +L + LA+ GK
Sbjct: 441 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 500
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH A+R + ++V +AL+ MY+K G + +R VF+ + R+ T++W +I+A H
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMH 559
Query: 493 GLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
GLG EA LF+RM G +P+ +T++ L AC+H G+V++G + ++ M+ H ++PTP
Sbjct: 560 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 619
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPL-EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
A +VD+LGRAG L EAY + +M E V AW ++L ACR+H+N+ LG+IA E+LL
Sbjct: 620 ILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLE 679
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EP+ + Y LCN+YS+ G+W AA +R M+ GV K G SW+++ +H F +
Sbjct: 680 LEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGES 739
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HP + ++ M +W E+ G+ PDT+ VLHD+++ K +LR HSEKLAIAFGL+
Sbjct: 740 AHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRA 799
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLRVCNDCH A KF+ K+V REIV+RD RFHHF+ G CSC DYW
Sbjct: 800 APGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/783 (32%), Positives = 411/783 (52%), Gaps = 111/783 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL +++ + K +H ++K G + +F+ SL+N Y + + A+ +FDEM
Sbjct: 81 YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEM- 139
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
P ++ V+WT +I Y + A+ +FVE
Sbjct: 140 ------------------------------PEKNVVTWTALITGYTLNSQPVLALEVFVE 169
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ P+ +T+ +L++C A ++ GK+VH + +K G + ++ NSL +Y K
Sbjct: 170 MLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTK--- 226
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
SG L+ F ++ +++V+TW +MI+ +++
Sbjct: 227 ----------------------------SGNLESGIRAFKRIPDKNVITWTTMISACAED 258
Query: 256 -GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
Y L +F +MLK + P++FTL S +S C + LGKQ+ + + P
Sbjct: 259 ENYTELGLNLFLDMLK-GEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLP 317
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N+ + YL Y++ G+ A R+F+ + D
Sbjct: 318 VKNSTM----------------------YL-----------YLRKGETEEAMRLFEEMED 344
Query: 375 RDVVAWTAMLVGYEQ--NGLNKD---------AVELFRSMVREGPKPNNYTLSAMLSVSS 423
V+ W AM+ G+ Q + D A+++FR +VR KP+ +T S++LSV S
Sbjct: 345 NSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCS 404
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
++ +L+ G+QIHA +++G S + V++AL+ MY+K G I A + F + R V+WT
Sbjct: 405 TMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRT-LVTWT 463
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI +QHG +AIQLFE M+ G KP+ IT+V +L+AC++ GLVE+ RY++MM+N
Sbjct: 464 SMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNE 523
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+ I+P H+ M+D+ R G L +AY FI+ EP+ W SL++ CR H N++L
Sbjct: 524 YHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFY 583
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
AA++LL ++P Y L N+Y S G+W D A +RK K+ + + SW+ I++KV+
Sbjct: 584 AADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVY 643
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM--LRHHSEKL 721
F +D HPQ +Y + + ++ K +G+ P + L+D EED K L+HHSE+L
Sbjct: 644 FFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERL 703
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+A GL+ P T+RI KN+ +C DCHS+IKF L +REIVVRD+ R H FK G CSC
Sbjct: 704 AVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSC 763
Query: 782 RDY 784
D+
Sbjct: 764 GDF 766
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/715 (36%), Positives = 392/715 (54%), Gaps = 75/715 (10%)
Query: 81 SWNTILSAYAKQGRLDLACEVF-NLMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
++N +LS YA+ G + A +F P R D V+W T++ + G F A++ +MV
Sbjct: 53 AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVA 112
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEM 197
V P T S L +C+ L L G+++H++V+K L+ V ++L++MYA
Sbjct: 113 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT----- 167
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE--RDVVTWNSMIAGYSQN 255
H G+ AR FD + + + + WN+MI GY+Q
Sbjct: 168 -----------------------HEQVGK---ARQVFDMVPDSGKQLGMWNAMICGYAQA 201
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL +FA M ++ P + T+AS L ACA E + +H Y+++ V
Sbjct: 202 GMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFV 261
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+ YA++G ++ ARRIF +
Sbjct: 262 QNALMDMYARLGKTDV---------------------------------ARRIFAMVDLP 288
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVR---EGPKPNNYTLSAMLSVSSSLASLDHGK 432
DVV+W ++ G G DA +L R M + G PN TL +L + LA+ GK
Sbjct: 289 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 348
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH A+R + ++V +AL+ MY+K G + +R VF+ + R+ T++W +I+A H
Sbjct: 349 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP-RRNTITWNVLIMAYGMH 407
Query: 493 GLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
GLG EA LF+RM G +P+ +T++ L AC+H G+V++G + ++ M+ H ++PTP
Sbjct: 408 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 467
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPL-EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
A +VD+LGRAG L EAY + +M E V AW ++L ACR+H+N+ LG+IA E+LL
Sbjct: 468 ILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLE 527
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EP+ + Y LCN+YS+ G+W AA +R M+ GV K G SW+++ +H F +
Sbjct: 528 LEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGES 587
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HP + ++ M +W E+ G+ PDT+ VLHD+++ K +LR HSEKLAIAFGL+
Sbjct: 588 AHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRA 647
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R+ KNLRVCNDCH A KF+ K+V REIV+RD RFHHF+ G CSC DYW
Sbjct: 648 APGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 200/467 (42%), Gaps = 96/467 (20%)
Query: 31 VGKLVHARIIKCG-LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
VG+ +HA +IK L + F+ ++L++ YA E + A++VFD ++
Sbjct: 137 VGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD------------MVPDS 184
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTV 148
KQ + W +I Y + G + A+R+F M + +P + T+
Sbjct: 185 GKQLGM-----------------WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTM 227
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
SVL +C + + VH +VVK G++G V N+L++MYA++G +A+ +F + L
Sbjct: 228 ASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDL 287
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+V SWN +++ ++ G+ + + L
Sbjct: 288 PDVVSWNTLIT--------------------------GCVVQGHVADAFQ---LAREMQQ 318
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L++ + P+ TL + L CA L GK+IH Y +R D VG+AL+ YAK G
Sbjct: 319 LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGC 378
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ + +R +FD L R+ + W +++ Y
Sbjct: 379 LAL---------------------------------SRAVFDRLPRRNTITWNVLIMAYG 405
Query: 389 QNGLNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRSGEASS 446
+GL +A LF M G +PN T A L+ S +D G Q+ HA G +
Sbjct: 406 MHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPT 465
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQH 492
+ ++ + +AG ++ A + + ++ VS W++M+ A H
Sbjct: 466 PDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 512
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSL----ASLDHGKQIHASALRSG--EASSLSVSNALITM 456
M+ G ++TL ++L S L A++ G++ HA AL++G NAL++M
Sbjct: 1 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60
Query: 457 YSKAGNINAARRVF-NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
Y++ G + A+R+F R + V+W +M+ L Q G+ +EA+Q M+ LG++PD +
Sbjct: 61 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120
Query: 516 TYVGVLTACTHGGLVEQGQRYY 537
T+ L AC+ L++ G+ +
Sbjct: 121 TFASALPACSRLELLDVGREMH 142
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P GK +H ++ L V + ++L++ YAK ++ ++ VFD +P + +WN ++ A
Sbjct: 344 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 403
Query: 89 YAKQGRLDLACEVFNLM-------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ- 140
Y G A +F+ M PN V++ + + G +++F M +D
Sbjct: 404 YGMHGLGGEATVLFDRMTASGEARPN--EVTFMAALAACSHSGMVDRGLQLFHAMERDHG 461
Query: 141 VLPTQFTVTSVL 152
V PT + V+
Sbjct: 462 VEPTPDILACVV 473
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/755 (33%), Positives = 411/755 (54%), Gaps = 95/755 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG ++H +K GL + + N+L++ Y+K +S A +F ++ K++ SWN+++ AY+
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
++G E F+L+ +M++E ++ + + T+ +
Sbjct: 391 REG---FVFETFDLLR------------------------KMWME--EELMEVNEVTILN 421
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C +L + + +H + ++ + N+ + YAK G + A+ VF GM K+
Sbjct: 422 LLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKS 481
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
VSSWN V I G++QNG +AL + M +
Sbjct: 482 VSSWNAV-------------------------------IGGHAQNGDPIKALDFYFEMTR 510
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
L PD F++ S L AC L L+ GK+IH +++R G+E
Sbjct: 511 LGIL-PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRN--------------------GLE 549
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+N +LL Y R F+++ D++ V W AML GY QN
Sbjct: 550 -------------MNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQN 596
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
L +A+ LFR M+ +G +P+ ++++L S L++L GK++H AL++ V+
Sbjct: 597 ELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVA 656
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+L+ MY+K+G + ++R+FN ++ + E SW MI HG G +A++LFE M
Sbjct: 657 CSLMDMYAKSGFLGHSQRIFNRLNGK-EVASWNVMITGFGVHGQGNKAVELFEDMKRSDK 715
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+PD T++GVL AC H GLV +G Y M+ ++K++P H+A ++D+LGRAG L EA
Sbjct: 716 QPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEAL 775
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
NFI MP EPD W SLLS+ + +L++G+ AEKLL +E + + +Y L NLY++ G
Sbjct: 776 NFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAG 835
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KW+ +R+ MK + ++K G SW++++ KV+ F + +P D I ++ +I
Sbjct: 836 KWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIV 895
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E+G+ PD + VLH++EE K ++L+ HSEK+AI FG ++T E TTLRI KNLR+C DCH+
Sbjct: 896 EIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHN 955
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K+I K REIV+RD RFHHFKKG+CSC DYW
Sbjct: 956 AAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/600 (23%), Positives = 262/600 (43%), Gaps = 115/600 (19%)
Query: 9 LISPLEF------YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
LIS EF + L+++ + +GK VH +K GL + +F+ N+++ Y K
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCG 259
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ A ++FD+MP + L SWN+++ +++ G W
Sbjct: 260 FLDEAVELFDKMPEQNLISWNSLIRGFSENG------------------FWL-------- 293
Query: 123 IGRFKNAIRMFVEMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
A R F +++ D ++P T+ ++L C+ G++ G +H VK GL +
Sbjct: 294 -----EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL 348
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V N+L++MY+K G A +F + K+V S
Sbjct: 349 MVCNALIDMYSKCGCLSEAAILFRKIENKSVVS--------------------------- 381
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
WNSMI YS+ G+ FE + M +++ ++ ++ T+ + L AC +L +
Sbjct: 382 ----WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRA 437
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H Y +R F + NA I+ YAK G + A+
Sbjct: 438 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE-------------------------- 471
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
+F + + V +W A++ G+ QNG A++ + M R G P+++++ ++L
Sbjct: 472 -------HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLL 524
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
L L +GK+IH LR+G + V+ +L+++Y R F + + +
Sbjct: 525 LACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMG-DKNS 583
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
V W +M+ +Q+ L EA+ LF +ML G++PD I +L AC+ + G+ +
Sbjct: 584 VCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCF 643
Query: 540 -MKNVHKIKPTPSHFASMVDLLGRAGLL---QEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+KN + S++D+ ++G L Q +N + +V +W +++ VH
Sbjct: 644 ALKN--SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNG----KEVASWNVMITGFGVH 697
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 230/554 (41%), Gaps = 107/554 (19%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPT 144
+ Y + RL VF+ + N++ W ++ Y + AI F+E++ + P
Sbjct: 155 ICGYPLESRL-----VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPD 209
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT ++ +CT D+ GK VH VK GL + V N+++ +Y K G A +FD
Sbjct: 210 NFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFD 269
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +N +++WNS+I G+S+NG+ EA
Sbjct: 270 KMPEQN-------------------------------LISWNSLIRGFSENGFWLEAYRA 298
Query: 265 FANMLKDS-SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F ++L+ L PD T+ + L C+ + +G IH ++ V NALI
Sbjct: 299 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALI--- 355
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
D Y K G + A +F + ++ VV+W +M
Sbjct: 356 ------------------------------DMYSKCGCLSEAAILFRKIENKSVVSWNSM 385
Query: 384 LVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+ Y + G + +L R M E + N T+ +L + L + +H +LR
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRH 445
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
++NA I Y+K G++ A VF ++ + + SW ++I AQ+G +A+
Sbjct: 446 SFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS-SWNAVIGGHAQNGDPIKALDF 504
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKN----------------VH 544
+ M LGI PD + V +L AC GL++ G+ + +++N H
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFH 564
Query: 545 KIKP--TPSHFASMVD---------LLGRAG--LLQEAYNFIENM---PLEPDVVAWGSL 588
KP ++F +M D L G + L EA + M LEPD +A S+
Sbjct: 565 CSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASI 624
Query: 589 LSACRVHKNLDLGK 602
L AC L LGK
Sbjct: 625 LGACSQLSALGLGK 638
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 21/275 (7%)
Query: 329 VEIAQKIVEQSGISYL---NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
VEI +K+ E +S + + T L+ Y G +R +FD L ++++ W A++
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVS 182
Query: 386 GYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY +N L +A+ F ++ +P+N+T ++ + + GK +H A++ G
Sbjct: 183 GYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLI 242
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
L V NA+I +Y K G ++ A +F+ + Q +SW S+I +++G EA + F
Sbjct: 243 MDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLIRGFSENGFWLEAYRAFRS 301
Query: 505 MLEL--GIKPDHITYVGVLTACTHGGLVEQGQRYYNM---MKNVHKIKPTPSHFASMVDL 559
+LE G+ PD T V +L C+ G V+ G + M + VH++ +++D+
Sbjct: 302 LLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN----ALIDM 357
Query: 560 LGRAGLLQEA---YNFIENMPLEPDVVAWGSLLSA 591
+ G L EA + IEN VV+W S++ A
Sbjct: 358 YSKCGCLSEAAILFRKIEN----KSVVSWNSMIGA 388
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/677 (36%), Positives = 386/677 (57%), Gaps = 40/677 (5%)
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
SV T I T G + A + F + + T + SCT L +GK++H
Sbjct: 13 SVDPATAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHC 68
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
+V +G S + N L++MY+K+GD A AV+ MR KN S N++++ ++ +G L
Sbjct: 69 LLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVN 128
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD+M +R + TWN+MIAG Q ++ E L +F M PD++TL S S A
Sbjct: 129 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSA 187
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L + +G+QIH Y I+ G+E L+++
Sbjct: 188 GLRSVSIGQQIHGYTIKY--------------------GLE-------------LDLVVN 214
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
++L Y++ G + + S+ R++VAW +++G QNG + + L++ M G +
Sbjct: 215 SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR 274
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
PN T +LS S LA G+QIHA A++ G +S ++V ++LI+MYSK G + A +
Sbjct: 275 PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA 334
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGG 528
F+ ++ V W+SMI A HG G+EAI+LF M E ++ + + ++ +L AC+H G
Sbjct: 335 FSE-REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG 393
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L ++G ++MM + KP H+ +VDLLGRAG L +A I +MP++ D+V W +L
Sbjct: 394 LKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTL 453
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC +HKN ++ + +++L I+P++S Y L N+++S +W D + +RKSM+ VK
Sbjct: 454 LSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 513
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G SW + + +VH F + D + IY+ + ++ E+K G+ PDTASVLHD++E+
Sbjct: 514 KEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEE 573
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE L HSEKLA+AF L+ PE +RI+KNLRVC+DCH A K+I + +REI +RD
Sbjct: 574 EKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDG 633
Query: 769 TRFHHFKKGLCSCRDYW 785
+RFHHF G CSC DYW
Sbjct: 634 SRFHHFINGKCSCGDYW 650
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 216/507 (42%), Gaps = 70/507 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
+ +QS ++ GK +H ++ G F+ N LM+ Y+K A V+ M
Sbjct: 46 LFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRM 105
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
K S N +++ Y + G L A +VF+ MP+R +W +I + + + +F
Sbjct: 106 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 165
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM P ++T+ SV + L +S G+++H + +K GL + V +SL +MY + G
Sbjct: 166 EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG 225
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ V M ++N +V WN++I G +Q
Sbjct: 226 KLQDGEIVIRSMPVRN-------------------------------LVAWNTLIMGNAQ 254
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG L ++ M+K S +P+K T + LS+C++L G+QIHA I+ +
Sbjct: 255 NGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 313
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V ++LIS Y+K G +G A + F D
Sbjct: 314 VVSSLISMYSKCGC---------------------------------LGDAAKAFSERED 340
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D V W++M+ Y +G +A+ELF +M + + N +L S D G +
Sbjct: 341 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 400
Query: 434 IHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ + + G L ++ + +AG ++ A + + + + V W +++ A H
Sbjct: 401 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIH 460
Query: 493 GLGEEAIQLFERMLELGIKP-DHITYV 518
E A ++F+ +L+ I P D YV
Sbjct: 461 KNAEMAQRVFKEILQ--IDPNDSACYV 485
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/562 (42%), Positives = 337/562 (59%), Gaps = 74/562 (13%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY-DFEALGMFANMLKDSSLKPDKFTLAS 283
G +D +R F+QM E +V++W ++I Y Q+G D EA+ +F M+
Sbjct: 9 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI-------------- 54
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
SA N VGN+LIS YA+ G +E
Sbjct: 55 --SASVNC-----------------------VGNSLISMYARSGRME------------- 76
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
AR+ FD L ++++V++ A++ GY +N +++A LF +
Sbjct: 77 --------------------DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 116
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
G + +T +++LS ++S+ ++ G+QIH L+ G S+ + NALI+MYS+ GNI
Sbjct: 117 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNI 176
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
AA +VFN + R +SWTSMI A+HG A+++F +MLE G KP+ ITYV VL+A
Sbjct: 177 EAAFQVFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 235
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H G++ +GQ+++N M H I P H+A MVDLLGR+GLL EA FI +MPL D +
Sbjct: 236 CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 295
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
W +LL ACRVH N +LG+ AAE +L EPD+ AY L NL++S G+W+D IRKSMK
Sbjct: 296 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 355
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
+ K G SW++++N+VH F V + HPQ IY ++ ++ +IKEMG++PDT VLH
Sbjct: 356 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLH 415
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
D+EE+ KEQ L HSEK+A+AFGLIST ++ +RI KNLRVC DCH+AIK+I REI
Sbjct: 416 DIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREI 475
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
VVRD+ RFHH K G+CSC DYW
Sbjct: 476 VVRDSNRFHHIKNGVCSCNDYW 497
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 145/300 (48%), Gaps = 37/300 (12%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N ++S++ SGR++ AR FD + E+++V++N+++ GY++N EA +F N + D+ +
Sbjct: 63 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF-NEIADTGI 121
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
FT AS LS A++ + G+QIH +++ + + + NALIS Y++ G +E A +
Sbjct: 122 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 181
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + + NVI++T+ M+ G+ ++G
Sbjct: 182 VFNE--MEDRNVISWTS-------------------------------MITGFAKHGFAT 208
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNAL 453
A+E+F M+ G KPN T A+LS S + + G++ S + G + +
Sbjct: 209 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 268
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ + ++G + A N + + + W +++ A HG E E +LE +PD
Sbjct: 269 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ--EPD 326
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 68/278 (24%)
Query: 58 YAKTE---SISYAKKVFDEMPVKTLCSW-------------------------------- 82
YAK S+ ++KVF++MP + SW
Sbjct: 2 YAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCV 61
Query: 83 -NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
N+++S YA+ GR++ A + F+++ ++ VS+ I+ Y + + + A +F E+ +
Sbjct: 62 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 121
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+ FT S+L+ ++G + G+++H ++K G + N+L++MY++ G+ A
Sbjct: 122 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 181
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VF+ M +NV SW SMI G++++G+ A
Sbjct: 182 VFNEMEDRNVISW-------------------------------TSMITGFAKHGFATRA 210
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
L MF ML ++ KP++ T + LSAC+++ + G++
Sbjct: 211 LEMFHKML-ETGTKPNEITYVAVLSACSHVGMISEGQK 247
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 31/135 (22%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H R++K G + + N+L++ Y++ +I A +VF+EM + + SW ++++ +AK
Sbjct: 144 GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK 203
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + T A+ MF +M++ P + T +V
Sbjct: 204 HG-------------------FAT------------RALEMFHKMLETGTKPNEITYVAV 232
Query: 152 LASCTALGDLSAGKK 166
L++C+ +G +S G+K
Sbjct: 233 LSACSHVGMISEGQK 247
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/651 (37%), Positives = 378/651 (58%), Gaps = 55/651 (8%)
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
QDQ+ P + ++A C GD+ +V H K ++ NSLL +K
Sbjct: 58 QDQIFP----LNKIIARCVRSGDIDGALRVFHGMRAKNTITW-----NSLLIGISKDPSR 108
Query: 197 MM-AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MM A +FD + + S+N+++S ++ + + A++ FD+M +D +WN+MI GY++
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +A +F +M++ + +
Sbjct: 169 GEMEKARELFYSMMEKNEVS---------------------------------------- 188
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF-DSLRD 374
NA+IS Y + G +E A + + + V+A+T ++ GY+K + A +F D +
Sbjct: 189 WNAMISGYIECGDLEKASHFFKVAPVR--GVVAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+++V W AM+ GY +N +D ++LFR+M+ EG +PN+ LS+ L S L++L G+QI
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +S + ++ +LI+MY K G + A ++F ++ +++ V+W +MI AQHG
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGN 365
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
++A+ LF M++ I+PD IT+V VL AC H GLV G Y+ M +K++P P H+
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT 425
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDLLGRAG L+EA I +MP P +G+LL ACRVHKN++L + AAEKLL +
Sbjct: 426 CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQ 485
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+ Y L N+Y+S +WED A +RK MK V K G+SW++I+NKVH F D +HP+
Sbjct: 486 NAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
D+I+ K+ ++ ++K G+ P+ LH+VEE+ KE++L HSEKLA+AFG I P+ +
Sbjct: 546 LDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGS 605
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++ KNLR+C DCH AIKFI ++ REI+VRD TRFHHFK G CSC DYW
Sbjct: 606 QIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 215/465 (46%), Gaps = 47/465 (10%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ-GRLDLACEVFNLMP 106
+F N ++ ++ I A +VF M K +WN++L +K R+ A ++F+ +P
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
D+ S+ ++ Y F+ A F M + +++ G++ ++
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYARRGEMEKARE 176
Query: 167 V-HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
+ +S + K +S N++++ Y + GD A F ++ V +W +++ ++ +
Sbjct: 177 LFYSMMEKNEVSW-----NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK 231
Query: 226 RLDLARAQF-DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
+++LA A F D + +++VTWN+MI+GY +N + L +F ML++ ++P+ L+S
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIRPNSSGLSSA 290
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C+ L L+LG+QIH + ++ +LIS Y K G
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG----------------- 333
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
++G A ++F+ ++ +DVVAW AM+ GY Q+G A+ LFR M+
Sbjct: 334 ----------------ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNI 463
+P+ T A+L + ++ G S +R + ++ + +AG +
Sbjct: 378 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
A ++ + +R + +++ A H E A E++L+L
Sbjct: 438 EEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 179/371 (48%), Gaps = 28/371 (7%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP-NRDS 110
N++++ Y + + A F PV+ + +W +++ Y K +++LA +F M N++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
V+W +I Y E R ++ +++F M+++ + P ++S L C+ L L G+++H
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
V K+ L V SL++MY K G+ A +F+ M+ K+V +WN ++S + G D A
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 231 RAQFDQMIER----DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL--KPDKFT-LAS 283
F +MI+ D +T+ +++ + G + F +M++D + +PD +T +
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVD 429
Query: 284 TLSACANLEK-LKLGKQI----HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
L LE+ LKL + + HA + T A N ++ +A A+K+++
Sbjct: 430 LLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA-------AEKLLQ- 481
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
++ N + L + Y R+ +++ +VV + GY + ++ V
Sbjct: 482 --LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVK----VPGYSWIEI-RNKVH 534
Query: 399 LFRSMVREGPK 409
FRS R P+
Sbjct: 535 HFRSSDRIHPE 545
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H + K L V SL++ Y K + A K+F+ M K + +WN ++S YA
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQ 145
+ G D A +F M + D +++ +++ N G + F MV+D +V P
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 146 FTVTSVLASCTALGDLSAGKKV--------HSFVVKTGLSGC 179
T ++ G L K+ H+ V T L C
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/706 (35%), Positives = 383/706 (54%), Gaps = 70/706 (9%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSV--SWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
+ ++ +AYA+ G LD A P+ S +W ++ + G A+R+F +
Sbjct: 47 FPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVF-RALPS 105
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
P T T L +C LGDL A + V G V V ++LL++Y++ G
Sbjct: 106 SARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCG----- 160
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
A+ D +R+ FD M +D V W++M+AG+ G
Sbjct: 161 -AMGDAIRV-------------------------FDGMPRKDHVAWSTMVAGFVSAGRPV 194
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EALGM++ M ++ + D+ + + AC ++G +H +R
Sbjct: 195 EALGMYSRM-REHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGM---------- 243
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
++V+ T+L+D Y K G AR++F + R+ V+
Sbjct: 244 -----------------------RMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVS 280
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ QNG +A++LFR M G +P++ L + L + + L GK IH L
Sbjct: 281 WNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFIL 340
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
R E + + A++ MYSK G++ +AR++FN + R + V W +MI HG G +A+
Sbjct: 341 RRLEFQCI-LGTAVLDMYSKCGSLESARKLFNKLSSR-DLVLWNAMIACCGTHGCGHDAL 398
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF+ + E GIKPDH T+ +L+A +H GLVE+G+ +++ M I+PT H +VDL
Sbjct: 399 ALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDL 458
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
L R+GL++EA + +M EP + W +LLS C +K L+LG+ A+K+L +P++ G
Sbjct: 459 LARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVL 518
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
+ + NLY++ KW+ IRK MK G KK G+S +++ H F +ED HPQ I
Sbjct: 519 ALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEIL 578
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
++K+ E+++MG+VP T V HD++EDVKEQ+L +HSE+LAIAFGL++T T L I+
Sbjct: 579 KMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVII 638
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH AIK+I K+VDREIVVRDA RFHHFK G CSC DYW
Sbjct: 639 KNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 174/399 (43%), Gaps = 99/399 (24%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V R G VF+ ++L++ Y++ ++ A +VFD MP K +W+T+++ + GR
Sbjct: 133 VRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGR 192
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
P A+ M+ M + V + + V+ +
Sbjct: 193 -----------P--------------------VEALGMYSRMREHGVAEDEVVMVGVIQA 221
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
CT G+ G VH ++ G+ V + SL++MYAK G +A+ VF M +N SW
Sbjct: 222 CTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSW 281
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N ++I+G++QNG+ EAL +F M S L
Sbjct: 282 N-------------------------------ALISGFAQNGHADEALDLFREM-STSGL 309
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNALISCYAKVGGVEIAQ 333
+PD L S L ACA++ LKLGK IH +I+R EF +G A++ Y+K G +E
Sbjct: 310 QPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCI--LGTAVLDMYSKCGSLE--- 364
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
AR++F+ L RD+V W AM+ +G
Sbjct: 365 ------------------------------SARKLFNKLSSRDLVLWNAMIACCGTHGCG 394
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
DA+ LF+ + G KP++ T +++LS S ++ GK
Sbjct: 395 HDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 433
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 67/320 (20%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
++Q+ + N +G VH R ++ G+ + V + SL++ YAK A++VF MP +
Sbjct: 218 VIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRN 277
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
SWN ++S +A+ G D A+ +F EM
Sbjct: 278 AVSWNALISGFAQNGHAD-------------------------------EALDLFREMST 306
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P + S L +C +G L GK +H F+++ C+ + ++L+MY+K G
Sbjct: 307 SGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCI-LGTAVLDMYSKCGSLES 365
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ +F +++ RD+V WN+MIA +G
Sbjct: 366 ARKLF-------------------------------NKLSSRDLVLWNAMIACCGTHGCG 394
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF--DATGPVG 316
+AL +F L ++ +KPD T AS LSA ++ ++ GK +I TEF + T
Sbjct: 395 HDALALFQE-LNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMI-TEFGIEPTEKHC 452
Query: 317 NALISCYAKVGGVEIAQKIV 336
++ A+ G VE A +++
Sbjct: 453 VCVVDLLARSGLVEEANEML 472
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/704 (33%), Positives = 396/704 (56%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++ AY K L LA ++F M N+D+V++ +++ Y+ G + AI +F+E+ +
Sbjct: 179 NSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIK 238
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P+ FT ++L++ L D G++VH FV+KT V V N+LL+ Y+K
Sbjct: 239 PSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK---------- 288
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
++D F +M E D +++N +I Y+ NG E+
Sbjct: 289 ---------------------HDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESF 327
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F L+ + +F A+ LS + L++G+QIH I + V NAL+
Sbjct: 328 DLFRK-LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDM 386
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + AQK IFD++ + V WTA
Sbjct: 387 YAKCNGDKEAQK---------------------------------IFDNIACKSTVPWTA 413
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y Q G +++ + +F M R G + T +++L ++LAS+ G+Q+H+ +RSG
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ +AL+ Y+K G + A + F + R +VSW ++I A AQ+G + + F
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERN-SVSWNALISAYAQNGNVDGTLNSF 532
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M++ G KPD ++++ VL+AC+H G VE+ ++N M ++++ P H+ SMVD+L R
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSA 621
G EA + MP EP + W S+L++CR+HKN +L K AA++L +E ++ Y
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYIN 652
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
+ N+Y+ G+W++ A ++K+M+ GV+K +SWV+I+++ HVF D HP+ I K
Sbjct: 653 MSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRK 712
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + E+++ G+ PDT LHDV+E +K + L++HSE+ AIAF L++TP+ + + +MKN
Sbjct: 713 INALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKN 772
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR C DCH+AIK I ++V+REI+VRD++RFHHFK G+CSC DYW
Sbjct: 773 LRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 166/611 (27%), Positives = 297/611 (48%), Gaps = 85/611 (13%)
Query: 34 LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
L+ A I+K G + + N +N + + + +A +VFD+MP K S N ++S + K G
Sbjct: 29 LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+L A E+F+ M R +VSWT +I Y + + K A R++ +M + + P T+ ++L+
Sbjct: 89 KLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS 148
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
L + ++H+ V+K G + V NSL++ Y K
Sbjct: 149 GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCK--------------------- 187
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
+ L LA F M+ +D VT+NS++ GYS G + EA+ +F L +S
Sbjct: 188 ----------THCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE-LHNSG 236
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+KP FT A+ LSA L+ K G+Q+H ++++T F VGNAL+ Y+K
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK-------- 288
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ ++ ++G ++F + + D +++ ++ Y NG
Sbjct: 289 ----------------------HDQVDEVG---KLFXEMPELDGISYNVVITSYAWNGQF 323
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
K++ +LFR + + + +LS+++S +L G+QIH A+ G V NAL
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENAL 383
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ MY+K A+++F+ I + TV WT+MI A Q G EE I +F M G+ D
Sbjct: 384 VDMYAKCNGDKEAQKIFDNIACKS-TVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPAD 442
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNM------MKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
T+ +L AC + + G++ +++ M NV+ ++++D + G +
Sbjct: 443 QATFASILRACANLASISLGRQLHSLLIRSGFMSNVYS-------GSALLDTYAKCGCMT 495
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IEPDNSGAYSALCN 624
+A MP E + V+W +L+SA + N+D G + + + ++ +PD S ++ ++ +
Sbjct: 496 DAIKSFGEMP-ERNSVSWNALISAYAQNGNVD-GTLNSFQQMIQSGYKPD-SVSFLSVLS 552
Query: 625 LYSSCGKWEDA 635
S CG E+A
Sbjct: 553 ACSHCGFVEEA 563
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 123/537 (22%), Positives = 226/537 (42%), Gaps = 135/537 (25%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P +F +A LL + + + G+ VH ++K +VF+ N+L+++Y+K + +
Sbjct: 235 SGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDE 294
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
K+F EMP S+N ++++YA W G+F
Sbjct: 295 VGKLFXEMPELDGISYNVVITSYA----------------------WN---------GQF 323
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
K + +F ++ + QF ++L+ T+ +L G+++H + G + V N+L
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENAL 383
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK + A+ +FD + K+ W
Sbjct: 384 VDMYAKCNGDKEAQKIFDNIACKSTVPW-------------------------------T 412
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MI+ Y Q G E + +F++M + + + D+ T AS L ACANL + LG+Q+H+ +IR
Sbjct: 413 AMISAYVQKGKHEEGINVFSDM-RRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ F + G+AL+ YAK G + A K
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIK-------------------------------- 499
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
F + +R+ V+W A++ Y QNG + F+ M++ G KP++ + ++LS S
Sbjct: 500 -SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
++ + N+ +++ + R+ +TSM+
Sbjct: 559 FVEEA----------------------------LWHFNSMTQIYEVTPKREH---YTSMV 587
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC----THGGLVEQGQRYYNM 539
L ++G +EA +L M E+ +P I + VL +C H + R +NM
Sbjct: 588 DVLCRNGRFDEAEKL---MTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/629 (37%), Positives = 386/629 (61%), Gaps = 50/629 (7%)
Query: 159 GDLSAGKKV-HSFVVKTGLSGCVNVTNSLLNMYA-KVGDEMMAKAVFDGMRLKNVSSWNV 216
GDL++ +V S VKT ++ NS+L Y+ + G +A+ +FD + ++ S+N+
Sbjct: 19 GDLNSALRVFESMTVKTTVT-----WNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNI 73
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+++ ++H+ ++ AR FDQM +D +WN+MI+G+SQNG +A +F M +S+
Sbjct: 74 MLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVS- 132
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
NA+IS Y + G +++A+++
Sbjct: 133 ---------------------------------------WNAMISGYVESGDLDLAKQLF 153
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
E + + +V+A+T ++ G++K G I A + F+ + +++V W AM+ GY +N ++
Sbjct: 154 EVAPVR--SVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENG 211
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++LF+ MV G +PN +LS++L S+L++L GKQ+H +S + +++ +L++M
Sbjct: 212 LKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSM 271
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y K G++ A ++F L+ +++ V+W +MI AQHG GE+A+ LF++M + G+KPD IT
Sbjct: 272 YCKCGDLEDAWKLF-LVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWIT 330
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+V VL+AC H G V+ G Y+N M + ++ P H+ +VDLLGR G L EA + I+ M
Sbjct: 331 FVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM 390
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P +P +G+LL ACR+HKNL+L + AA+ LL ++P+++ Y L N+Y++ +W+ A
Sbjct: 391 PFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVA 450
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
+R+SMK V KT G+SW+++++ VH F D +HP+ I+ K+ ++ +++ G+VP
Sbjct: 451 MVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVP 510
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
D LHDV E+ K+Q+L HSEKLAIA+GLI P T +R+ KNLRVC DCHSA K+I
Sbjct: 511 DLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYIS 570
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ R I+VRD TRFHHF++G CSC DYW
Sbjct: 571 AIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 207/379 (54%), Gaps = 25/379 (6%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA-KQGRLDLACEVFNLM 105
+V N ++ + ++ ++ A +VF+ M VKT +WN++L+ Y+ ++G++ +A ++F+ +
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT--SVLASCTALGDLSA 163
P D S+ ++ Y ++A R+F DQ +P + T + ++++ + G +
Sbjct: 64 PEPDIFSYNIMLACYLHNADVESA-RLFF----DQ-MPVKDTASWNTMISGFSQNGMMDQ 117
Query: 164 GKKVHSFV-VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI 222
+++ + V+ +S N++++ Y + GD +AK +F+ +++V +W +++ +
Sbjct: 118 ARELFLVMPVRNSVS-----WNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFM 172
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
G+++LA F++M +++VTWN+MIAGY +N L +F M+ +S +P+ +L+
Sbjct: 173 KFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMV-ESGFRPNPSSLS 231
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
S L C+NL LKLGKQ+H I ++ G +L+S Y K G +E A K+ +
Sbjct: 232 SVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLV--MP 289
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVE 398
+V+ + ++ GY + G A +FD +RD D + + A+L G +E
Sbjct: 290 QKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIE 349
Query: 399 LFRSMVRE---GPKPNNYT 414
F SMVR+ KP++YT
Sbjct: 350 YFNSMVRDYGVEAKPDHYT 368
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 17/202 (8%)
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA-QHGLGEEAIQL 501
++S++ SN +IT + ++G++N+A RVF + + TV+W SM+ + + G + A QL
Sbjct: 1 KSSNVISSNRVITNHIRSGDLNSALRVFESMTVKT-TVTWNSMLAGYSNRRGKIKVARQL 59
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+R+ E PD +Y +L H VE + +++ M +K T S + +M+
Sbjct: 60 FDRIPE----PDIFSYNIMLACYLHNADVESARLFFDQM----PVKDTAS-WNTMISGFS 110
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS-GAYS 620
+ G++ +A MP+ + V+W +++S +LDL K +L + P S A++
Sbjct: 111 QNGMMDQARELFLVMPVR-NSVSWNAMISGYVESGDLDLAK----QLFEVAPVRSVVAWT 165
Query: 621 ALCNLYSSCGKWEDAANIRKSM 642
A+ + GK E A + M
Sbjct: 166 AMITGFMKFGKIELAEKYFEEM 187
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP SL S L L SNL + +GK VH I K + ++ SL++ Y K
Sbjct: 225 PNPSSLSSVL-----LGCSNLSALK--LGKQVHQLICKSPVSWNITAGTSLLSMYCKCGD 277
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ A K+F MP K + +WN ++S YA+ G + A +F+ M + D +++ ++
Sbjct: 278 LEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSA 337
Query: 120 YNEIGRFKNAIRMFVEMVQD---QVLPTQFT 147
N G I F MV+D + P +T
Sbjct: 338 CNHAGFVDLGIEYFNSMVRDYGVEAKPDHYT 368
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/755 (33%), Positives = 410/755 (54%), Gaps = 95/755 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG ++H +K GL + + N+L++ Y+K +S A +F ++ K++ SWN+++ AY+
Sbjct: 331 VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYS 390
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
++G E F+L+ +M++E ++ + + T+ +
Sbjct: 391 REG---FVFETFDLLR------------------------KMWME--EELMEVNEVTILN 421
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C +L + + +H + ++ + N+ + YAK G + A+ VF GM K+
Sbjct: 422 LLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKS 481
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
VSSWN V I G++QNG +AL + M +
Sbjct: 482 VSSWNAV-------------------------------IGGHAQNGDPIKALDFYFEMTR 510
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
L PD F++ S L AC L L+ GK+IH +++R G+E
Sbjct: 511 LGIL-PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRN--------------------GLE 549
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+N +LL Y R F+ + D++ V W AML GY QN
Sbjct: 550 -------------MNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQN 596
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
L +A+ LFR M+ +G +P+ ++++L S L++L GK++H AL++ V+
Sbjct: 597 ELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVA 656
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+L+ MY+K+G + ++R+FN ++ + E SW MI HG G +A++LFE M
Sbjct: 657 CSLMDMYAKSGFLGHSQRIFNRLNGK-EVASWNVMITGFGVHGQGNKAVELFEDMKRSDK 715
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+PD T++GVL AC H GLV +G Y M+ ++K++P H+A ++D+LGRAG L EA
Sbjct: 716 QPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEAL 775
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
NFI MP EPD W SLLS+ + +L++G+ AEKLL +E + + +Y L NLY++ G
Sbjct: 776 NFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAG 835
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KW+ +R+ MK + ++K G SW++++ KV+ F + +P D I ++ +I
Sbjct: 836 KWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIV 895
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E+G+ PD + VLH++EE K ++L+ HSEK+AI FG ++T E TTLRI KNLR+C DCH+
Sbjct: 896 EIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHN 955
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K+I K REIV+RD RFHHFKKG+CSC DYW
Sbjct: 956 AAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/600 (23%), Positives = 262/600 (43%), Gaps = 115/600 (19%)
Query: 9 LISPLEF------YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
LIS EF + L+++ + +GK VH +K GL + +F+ N+++ Y K
Sbjct: 200 LISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCG 259
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ A ++FD+MP + L SWN+++ +++ G W
Sbjct: 260 FLDEAVELFDKMPEQNLISWNSLIRGFSENG------------------FWL-------- 293
Query: 123 IGRFKNAIRMFVEMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
A R F +++ D ++P T+ ++L C+ G++ G +H VK GL +
Sbjct: 294 -----EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL 348
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V N+L++MY+K G A +F + K+V S
Sbjct: 349 MVCNALIDMYSKCGCLSEAAILFRKIENKSVVS--------------------------- 381
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
WNSMI YS+ G+ FE + M +++ ++ ++ T+ + L AC +L +
Sbjct: 382 ----WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRA 437
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H Y +R F + NA I+ YAK G + A+
Sbjct: 438 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE-------------------------- 471
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
+F + + V +W A++ G+ QNG A++ + M R G P+++++ ++L
Sbjct: 472 -------HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLL 524
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
L L +GK+IH LR+G + V+ +L+++Y R F + + +
Sbjct: 525 LACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMG-DKNS 583
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
V W +M+ +Q+ L EA+ LF +ML G++PD I +L AC+ + G+ +
Sbjct: 584 VCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCF 643
Query: 540 -MKNVHKIKPTPSHFASMVDLLGRAGLL---QEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+KN + S++D+ ++G L Q +N + +V +W +++ VH
Sbjct: 644 ALKN--SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNG----KEVASWNVMITGFGVH 697
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 229/554 (41%), Gaps = 107/554 (19%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPT 144
+ Y + RL VF+ + N++ W ++ Y + AI F+E++ + P
Sbjct: 155 ICGYPLESRL-----VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPD 209
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
FT ++ +CT D+ GK VH VK GL + V N+++ +Y K G A +FD
Sbjct: 210 NFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFD 269
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +N +++WNS+I G+S+NG+ EA
Sbjct: 270 KMPEQN-------------------------------LISWNSLIRGFSENGFWLEAYRA 298
Query: 265 FANMLKDS-SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F ++L+ L PD T+ + L C+ + +G IH ++ V NALI
Sbjct: 299 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALI--- 355
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
D Y K G + A +F + ++ VV+W +M
Sbjct: 356 ------------------------------DMYSKCGCLSEAAILFRKIENKSVVSWNSM 385
Query: 384 LVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+ Y + G + +L R M E + N T+ +L + L + +H +LR
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRH 445
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
++NA I Y+K G++ A VF ++ + + SW ++I AQ+G +A+
Sbjct: 446 SFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS-SWNAVIGGHAQNGDPIKALDF 504
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKN----------------VH 544
+ M LGI PD + V +L AC GL++ G+ + +++N H
Sbjct: 505 YFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFH 564
Query: 545 KIKP--TPSHFASMVD---------LLGRAG--LLQEAYNFIENM---PLEPDVVAWGSL 588
KP ++F M D L G + L EA + M LEPD +A S+
Sbjct: 565 CSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASI 624
Query: 589 LSACRVHKNLDLGK 602
L AC L LGK
Sbjct: 625 LGACSQLSALGLGK 638
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 21/275 (7%)
Query: 329 VEIAQKIVEQSGISYL---NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
VEI +K+ E +S + + T L+ Y G +R +FD L ++++ W A++
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVS 182
Query: 386 GYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY +N L +A+ F ++ +P+N+T ++ + + GK +H A++ G
Sbjct: 183 GYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLI 242
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
L V NA+I +Y K G ++ A +F+ + Q +SW S+I +++G EA + F
Sbjct: 243 MDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLIRGFSENGFWLEAYRAFRS 301
Query: 505 MLEL--GIKPDHITYVGVLTACTHGGLVEQGQRYYNM---MKNVHKIKPTPSHFASMVDL 559
+LE G+ PD T V +L C+ G V+ G + M + VH++ +++D+
Sbjct: 302 LLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN----ALIDM 357
Query: 560 LGRAGLLQEA---YNFIENMPLEPDVVAWGSLLSA 591
+ G L EA + IEN VV+W S++ A
Sbjct: 358 YSKCGCLSEAAILFRKIEN----KSVVSWNSMIGA 388
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 378/653 (57%), Gaps = 40/653 (6%)
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+Q Q ++ + S+L CT + K+VH+ +++ GLS C V L+ M KV
Sbjct: 34 LQHQRKLLEWRLMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVP 90
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
M S+ ++V F Q+ + W +MI GY+ G
Sbjct: 91 M--------------GSYPLLV---------------FGQVNYPNPFLWTAMIRGYALQG 121
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY-IIRTEFDATGPV 315
E+ + M +D + P FT ++ AC + LGKQ+HA I+ F + V
Sbjct: 122 LLSESTNFYTRMRRDG-VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN++I Y K G + A+K+ ++ +S +V+++T L+ Y K GD+ A +FD L +
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDE--MSERDVVSWTELIVAYAKYGDMESASGLFDDLPSK 238
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+VAWTAM+ GY QNG K+A+E F+ M G + + TL+ ++S + L ++ H I
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIR 298
Query: 436 ASALRSGEASS--LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
A RSG S + V +ALI MYSK G+ + A +VF ++ R S++SMI+ A HG
Sbjct: 299 DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN-VFSYSSMILGYAMHG 357
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
A+QLF ML+ I+P+ +T++G+L+AC+H GLVEQG++ + M+ + P+P H+
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
A MVDLLGRAG L+EA + ++ MP+EP+ WG+LL ACR+H N D+ +IAA +L +EP
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP 477
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN-KVHVFGVEDWLH 672
+ G Y L N+Y+S G+WE+ + +RK ++ G KK G SW + +N ++H F D H
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTH 537
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
P+ I + ++ + ++ G+ P+ S +D+ +D KE++L HSEKLA+A+GL+ T
Sbjct: 538 PRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEA 597
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T++IMKN+R+C DCH+ + ++ REI+VRD RFHHF G CSC ++W
Sbjct: 598 GDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 207/467 (44%), Gaps = 71/467 (15%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESI--SYAKKVFDEMPVKTLCSWNTILSAYA 90
K VHA II+ GL ++ L+ K + SY VF ++ W ++ YA
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
QG L + + M +D V P FT ++
Sbjct: 119 LQGLLS-------------------------------ESTNFYTRMRRDGVGPVSFTFSA 147
Query: 151 VLASCTALGDLSAGKKVHS-FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+ +C A ++ GK+VH+ ++ G + + V NS++++Y K G A+ VFD M +
Sbjct: 148 LFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSER 207
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V SW ++ + G ++ A FD + +D+V W +M+ GY+QNG EAL F M
Sbjct: 208 DVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM- 266
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--VGNALISCYAKVG 327
+D ++ D+ TLA +SACA L +K I R+ F +G VG+ALI Y+K G
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A K +F+ +++R+V ++++M++GY
Sbjct: 327 SPDEAYK---------------------------------VFEVMKERNVFSYSSMILGY 353
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASS 446
+G A++LF M++ +PN T +LS S ++ G+Q+ A + G A S
Sbjct: 354 AMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 413
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ + +AG + A + + W +++ A HG
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 171/333 (51%), Gaps = 37/333 (11%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYA 67
+ P+ F ++ L ++ + N +GK VHA+ I G S +++ NS+++ Y K + A
Sbjct: 138 VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCA 197
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+KVFDEM + + SW ++ AYAK G ++ A +F+ +P++D V+WT ++ Y + GR K
Sbjct: 198 RKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPK 257
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL--SGCVNVTNS 185
A+ F +M + + T+ V+++C LG + + ++G SG V V ++
Sbjct: 258 EALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSA 317
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MY+K G A VF+ M+ +NV S +
Sbjct: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFS-------------------------------Y 346
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
+SMI GY+ +G AL +F +MLK + ++P+K T LSAC++ ++ G+Q+ A +
Sbjct: 347 SSMILGYAMHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKME 405
Query: 306 RTEFDATGPVGNA-LISCYAKVGGVEIAQKIVE 337
+ A P A ++ + G +E A +V+
Sbjct: 406 KFFGVAPSPDHYACMVDLLGRAGCLEEALDLVK 438
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/752 (33%), Positives = 394/752 (52%), Gaps = 97/752 (12%)
Query: 34 LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
L+HA I G +VF+ ++L++ Y K + YA+KVFD MP + WNT+++ K
Sbjct: 129 LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKN- 187
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
C F ++I++F EMV D V TVT+VL
Sbjct: 188 ----CC--------------------------FDDSIQLFREMVADGVRVDSSTVTAVLP 217
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+ L +L G + +K G C V L+++Y+K GD
Sbjct: 218 AAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGD------------------ 259
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
++ AR F ++ D++ +N+MI+G++ NG ++ +F +L S
Sbjct: 260 -------------VNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLF-SG 305
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+ T+ + + L L IH + +++ V A + Y K+ +++A+
Sbjct: 306 ERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLAR 365
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+FD ++ VVAW AM+ GY QNG
Sbjct: 366 ---------------------------------HLFDESPEKTVVAWNAMISGYTQNGST 392
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+ A+ LF+ M++ PN T++ +LS + L SL GK +H ++ VS AL
Sbjct: 393 ETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTAL 452
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ MY+K GNI+ A ++F+ + + TV+W +MI HG G EA++L+ ML LG P
Sbjct: 453 VDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPS 511
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
+T++ VL AC+H GLV +G+ ++ M N ++I+P H+A MVD+LGR+G L++A FI
Sbjct: 512 AVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFI 571
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
+ MP+EP WG+LL AC +HK+ D+ ++A+E+L ++P + G Y L N+YS +
Sbjct: 572 KKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFP 631
Query: 634 DAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMG 693
AA+IR+ +K + K+ G + +++ HVF D H IY K+ K+ +++EMG
Sbjct: 632 KAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMG 691
Query: 694 FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIK 753
+ +T LHDVEE+ KE + HSEKLAIAFGLI+T +RI+KNLRVC DCH+A K
Sbjct: 692 YQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATK 751
Query: 754 FICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
FI K+ +R IVVRDA RFHHFK G+CSC DYW
Sbjct: 752 FISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 40/241 (16%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
TPN ++ + L A L + GK VH I L ++++ +L++ YAK
Sbjct: 408 TPNAVTITTILSACAQLGSLSF-------GKWVHHLIKSENLEPNIYVSTALVDMYAKCG 460
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+IS A ++FD M K +WNT++ Y G Y
Sbjct: 461 NISEAWQLFDSMSEKNTVTWNTMIFGYGLHG--------------------------YGH 494
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVN 181
A++++ EM+ P+ T SVL +C+ G + G+++ H+ V K + +
Sbjct: 495 -----EALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIE 549
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
++++ + G A M ++ + W ++ + D+AR +++ E
Sbjct: 550 HYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFEL 609
Query: 241 D 241
D
Sbjct: 610 D 610
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 262/705 (37%), Positives = 390/705 (55%), Gaps = 70/705 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ ++ AY+ G + A VF+ + +D+V+WT ++ Y+E +N +++F +M
Sbjct: 570 SALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSK 629
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
F +TSVL + L + GK +H+ VKT +V +LL+MYAK G+
Sbjct: 630 LNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGN------- 682
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
++ AR F+ + DV+ W+ MI+ Y+Q + +A
Sbjct: 683 ------------------------IEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAF 718
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M++ SS+ P++F+L+S L ACAN+ L LGKQIH + I+ ++ VGNALI
Sbjct: 719 ELFIRMMR-SSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDL 777
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK D+ + IF SLRD + V+W
Sbjct: 778 YAKCS---------------------------------DMESSLEIFSSLRDVNEVSWNT 804
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++VGY ++G + A+ +FR M T S++L +S AS++H Q+H +S
Sbjct: 805 IIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKST 864
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S VSN+LI Y+K G I AR +F + + VSW ++I A HG A +LF
Sbjct: 865 FNSDTIVSNSLIDSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVHGQAAMAQELF 923
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+ M + IK + IT+V +L+ C GLV QG ++ M+ H I+P+ H+ +V LLGR
Sbjct: 924 DMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGR 983
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L +A NFI ++P P + W +LLS+C VHKN++LG+ +AEK+L IEP + Y L
Sbjct: 984 AGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLL 1043
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+YS+ G + A RKSM+ +GV+K G SWV+I+ +VH F V HP I N M
Sbjct: 1044 SNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVI-NAM 1102
Query: 683 AKIWDEIKEM--GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ W +K + G+VPDT VLHD+EE+ K +ML HSE+LA+A+GL+ TP +RIMK
Sbjct: 1103 LE-WLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMK 1161
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLR C DCH+ K I K+V +EI+VRD RFHHF++G CSC DYW
Sbjct: 1162 NLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 158/584 (27%), Positives = 254/584 (43%), Gaps = 105/584 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCG--LHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
YA LLQ + + G+ VH +++ G L +F N L+N Y K
Sbjct: 431 YARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKV------------ 478
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
G A VF+ +P R+ VS+ T++ + G F+ A +F
Sbjct: 479 -------------------GPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALF 519
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+ + QF +T+VL A+ L VH+ K G V ++L++ Y+
Sbjct: 520 QRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMC 579
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G A+ VFDG+ + +D V W +M++ YS
Sbjct: 580 GVVSDARRVFDGI-------------------------------VGKDAVAWTAMVSCYS 608
Query: 254 QNGYDFEALGMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+N L +F+ M + S L P F L S L A L + LGK IHA ++T +D
Sbjct: 609 ENDCPENTLQIFSKMRVAVSKLNP--FALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V AL+ YAK G +E AR F+ +
Sbjct: 667 RHVYGALLDMYAKCGNIE---------------------------------DARLAFEMV 693
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+ DV+ W+ M+ Y Q N+ A ELF M+R PN ++LS++L +++ LD GK
Sbjct: 694 TNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGK 753
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
QIH A++ G S L V NALI +Y+K ++ ++ +F+ + E VSW ++IV ++
Sbjct: 754 QIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNE-VSWNTIIVGYSKS 812
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ-GQRYYNMMKNVHKIKPTPS 551
G GE A+ +F M + +TY VL AC + GQ + + K+ S
Sbjct: 813 GFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVS 872
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ S++D + G +++A E + E D+V+W +++S VH
Sbjct: 873 N--SLIDSYAKCGCIRDAREIFETLK-ECDLVSWNAIISGYAVH 913
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 208/464 (44%), Gaps = 69/464 (14%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+ +L YAK G ++ A F ++ N D + W+ +I Y + + + A +F+ M++ V
Sbjct: 670 YGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSV 729
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +F+++SVL +C + L GK++H+ +K G + V N+L+++YAK D +
Sbjct: 730 SPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLE 789
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F +R N SWN + I GYS++G+ A
Sbjct: 790 IFSSLRDVNEVSWNTI-------------------------------IVGYSKSGFGEAA 818
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + +S+ + T +S L ACA+ + Q+H I ++ F++ V N+LI
Sbjct: 819 LSVFREM-RAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLID 877
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G + A R IF++L++ D+V+W
Sbjct: 878 SYAKCGCIRDA---------------------------------REIFETLKECDLVSWN 904
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA-LR 440
A++ GY +G A ELF M + K N+ T A+LSV S + G + S L
Sbjct: 905 AIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLD 964
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G S+ ++ + +AG +N A I + W +++ + H E
Sbjct: 965 HGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRF 1024
Query: 501 LFERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
E++LE I+P D TYV + + G ++Q + M+N+
Sbjct: 1025 SAEKVLE--IEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNI 1066
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 179/404 (44%), Gaps = 73/404 (18%)
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV--TNSLLNMYAKVGDEMMAKAVF 203
+ +L C A GD G+ VH VV++G +++ N LLNMY KVG A VF
Sbjct: 429 YAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVF 488
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
DG+ +N+ S+ +V H G + A A F ++ W G+ N
Sbjct: 489 DGLPERNMVSFVTLVQGHALRGEFEEASALFQRL------RWE----GHEVN-------- 530
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F L + L ++ L L +HA + D VG+ALI Y
Sbjct: 531 --------------QFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAY 576
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+ G V A RR+FD + +D VAWTAM
Sbjct: 577 SMCGVVSDA---------------------------------RRVFDGIVGKDAVAWTAM 603
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ Y +N ++ +++F M K N + L+++L + L+S+ GK IHA ++++
Sbjct: 604 VSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLY 663
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V AL+ MY+K GNI AR F ++ + + W+ MI AQ E+A +LF
Sbjct: 664 DTERHVYGALLDMYAKCGNIEDARLAFEMVT-NDDVILWSLMISRYAQCNQNEQAFELFI 722
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
RM+ + P+ + VL AC + L++ G++ +N H IK
Sbjct: 723 RMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHN-----HAIK 761
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 36/274 (13%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S +SP EF + +LQ+ +GK +H IK G +F+ N+L++ YAK +
Sbjct: 727 SSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMES 786
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
+ ++F + SWNTI+ Y+K G + A VF
Sbjct: 787 SLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFR----------------------- 823
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
EM V TQ T +SVL +C + ++ +VH + K+ + V+NSL
Sbjct: 824 --------EMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSL 875
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDV 242
++ YAK G A+ +F+ ++ ++ SWN ++S + G+ +A+ FD M I+ +
Sbjct: 876 IDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKAND 935
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+T+ ++++ G + L +F +M D ++P
Sbjct: 936 ITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEP 969
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/788 (32%), Positives = 410/788 (52%), Gaps = 110/788 (13%)
Query: 11 SPLEFYAHLLQSNLKSRNPF-------------VGKLVHARIIKCGLHLSVFLKNSLMNF 57
S + FY HLL++ S + F +G +HA + G ++F+ ++L++
Sbjct: 88 SSISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDL 147
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
Y K ++YA+KVFD+MP + WNT+++ + C
Sbjct: 148 YCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRN-----CC------------------ 184
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ +++++F +MV V TV +VL + + ++ G + +K G
Sbjct: 185 --------YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFH 236
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
V L+++++K D A+ +F +R ++ S
Sbjct: 237 FDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVS------------------------ 272
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
+N++I+G+S NG A+ F +L S + T+ + + L L
Sbjct: 273 -------YNALISGFSCNGETECAVKYFRELLV-SGQRVSSSTMVGLIPVSSPFGHLHLA 324
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
I + +++ V AL + Y+++ +++A++
Sbjct: 325 CCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQ----------------------- 361
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
+FD ++ V AW AM+ GY Q+GL + A+ LF+ M+ PN T+++
Sbjct: 362 ----------LFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITS 411
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
+LS + L +L GK +H ++ VS ALI MY+K GNI+ A ++F+L +
Sbjct: 412 ILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTS-EK 470
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
TV+W +MI HG G+EA++LF ML LG +P +T++ VL AC+H GLV +G +
Sbjct: 471 NTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIF 530
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+ M N ++I+P H+A MVD+LGRAG L++A FI MP+EP WG+LL AC +HK+
Sbjct: 531 HAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKD 590
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
+L ++A+E+L ++P N G Y L N+YS + AA++R+++K + KT G + ++
Sbjct: 591 TNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIE 650
Query: 658 IQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHH 717
+ HVF D H Q +IY K+ ++ +++EMG+ +T + LHDVEE+ KE M H
Sbjct: 651 VNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVH 710
Query: 718 SEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
SEKLAIAFGLI+T T +RI+KNLRVC DCH+A KFI K+ +R IVVRDA RFHHFK G
Sbjct: 711 SEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDG 770
Query: 778 LCSCRDYW 785
+CSC DYW
Sbjct: 771 ICSCGDYW 778
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 225/508 (44%), Gaps = 90/508 (17%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
ARA F + + D+ +N +I G+S + D ++ + ++LK+++L PD FT A +SA
Sbjct: 59 ARALFFSVPKPDIFLFNVLIKGFSFSP-DASSISFYTHLLKNTTLSPDNFTYAFAISASP 117
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ LG +HA+ + FD+ V +AL+ Y K S ++Y
Sbjct: 118 D---DNLGMCLHAHAVVDGFDSNLFVASALVDLYCKF------------SRVAY------ 156
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
AR++FD + DRD V W M+ G +N D+V++F+ MV +G +
Sbjct: 157 ---------------ARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVR 201
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
++ T++ +L + + + G I AL+ G V LI+++SK +++ AR +
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLL 261
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV--------- 520
F +I + + VS+ ++I + +G E A++ F +L G + T VG+
Sbjct: 262 FGMIR-KPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGH 320
Query: 521 --LTACTHGGLVEQG-----------QRYYNMMKNV--------HKIKPTPSHFASMVDL 559
L C G V+ G Y+ + + + T + + +M+
Sbjct: 321 LHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISG 380
Query: 560 LGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
++GL + A + + M P+ V S+LSAC L GK + +L+ +
Sbjct: 381 YAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK-SVHQLIKSKNLEQ 439
Query: 617 GAY--SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
Y +AL ++Y+ CG +A+ + K T ++ + +H +G
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQL---FDLTSEKNTVTWNTMIFGYGLHGYG-------- 488
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVL 702
++ K+++E+ +GF P + + L
Sbjct: 489 -----DEALKLFNEMLHLGFQPSSVTFL 511
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/602 (38%), Positives = 360/602 (59%), Gaps = 8/602 (1%)
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
LNM K+G ++ A + G++ + + +V+ + SG +D + + F+ + E + +N
Sbjct: 83 LNML-KLGHQVHAHMLLRGLQPTALVG-SKMVAFYASSGDIDSSVSVFNGIGEPSSLLFN 140
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
SMI Y++ G+ + + +M D FT L + L + +GK +H I+R
Sbjct: 141 SMIRAYARYGFAERTVATYFSM-HSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILR 199
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
V +LI Y K G + A K+ + I +V ++ LL GY K G I A
Sbjct: 200 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR--DVSSWNALLAGYTKSGCIDAAL 257
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSS 424
IF+ + R++V+WT M+ GY Q+GL + A+ LF MV+E G +PN T+ ++L +
Sbjct: 258 AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQ 317
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET-VSWT 483
L++L+ G+QIH A R G S+ SV AL MY+K G++ AR F+ ++ ++ ++W
Sbjct: 318 LSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 377
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI A A +G G +A+ F M++ GI+PD IT+ G+L+ C+H GLV+ G +Y+N M
Sbjct: 378 TMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTT 437
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+ I P H+A + DLLGRAG L EA + MP+ WGSLL+ACR H+NL++ +
Sbjct: 438 YSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAET 497
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
AA KL ++EP+N+G Y L N+Y+ G+W++ +R +K G KK+ G SW++I K H
Sbjct: 498 AARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAH 557
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAI 723
+F D HPQ IY + + +++K G+ PDT+ VLHD+ E+ KE L HSEKLA+
Sbjct: 558 MFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAV 617
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
AFG+++TP T LR+ KNLR+C DCH+A+ FI ++ RE++VRD RFHHFK G CSC D
Sbjct: 618 AFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGD 677
Query: 784 YW 785
YW
Sbjct: 678 YW 679
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 147/591 (24%), Positives = 255/591 (43%), Gaps = 86/591 (14%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+ P PP ++S + L N+ +G VHA ++ GL + + + ++ FYA
Sbjct: 62 LSAPGPPPILSYAPVFQFLTGLNMLK----LGHQVHAHMLLRGLQPTALVGSKMVAFYAS 117
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ G +D + VFN + S+ + ++I Y
Sbjct: 118 S-------------------------------GDIDSSVSVFNGIGEPSSLLFNSMIRAY 146
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
G + + + M FT VL S L + GK VH +++ GL +
Sbjct: 147 ARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDL 206
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V SL+ +Y K G+ A VFD M +++VSSWN +++ + SG +D A A F++M R
Sbjct: 207 YVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWR 266
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQ 299
++V+W +MI+GYSQ+G +AL +F M+K DS ++P+ T+ S L ACA L L+ G+Q
Sbjct: 267 NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQ 326
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
IH R ++ V AL + YAK G + A+ ++ + N+I
Sbjct: 327 IHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLI------------ 374
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
AW M+ Y G AV FR M++ G +P++ T + +L
Sbjct: 375 -------------------AWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLL 415
Query: 420 SVSSSLASLDHGKQI--HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
S S +D G + H S S + + + +AG + A ++ +
Sbjct: 416 SGCSHSGLVDVGLKYFNHMSTTYSINP-RVEHYACVADLLGRAGRLAEASKLVGEMPMPA 474
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRY 536
W S++ A +H E A ++ L +P++ YV + G ++ +
Sbjct: 475 GPSIWGSLLAACRKHRNLEMAETAARKLFVL--EPENTGNYVLLSNMYAEAGRWQEVDKL 532
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLL----------QEAYNFIENMP 577
++K+ K +P S +++ G+A + +E Y F+E +P
Sbjct: 533 RAIVKS-QGTKKSPG--CSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALP 580
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 69/350 (19%)
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
P + A L LKLG Q+HA+++ T VG+ +++ YA G ++
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDID----- 122
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
S +S N IG+ P+ +F+S M+ Y + G +
Sbjct: 123 ---SSVSVFN------------GIGE--PSSLLFNS-----------MIRAYARYGFAER 154
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
V + SM G + +T +L S L S+ GK +H LR G L V+ +LI
Sbjct: 155 TVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLII 214
Query: 456 MYSKAGNINAARRVFN-------------------------------LIHWRQETVSWTS 484
+Y K G IN A +VF+ + WR VSWT+
Sbjct: 215 LYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN-IVSWTT 273
Query: 485 MIVALAQHGLGEEAIQLFERML--ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
MI +Q GL ++A+ LF+ M+ + G++P+ +T + VL AC +E+G++ + +
Sbjct: 274 MISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR 333
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL-EPDVVAWGSLLSA 591
+ + S ++ + + G L +A N + + E +++AW ++++A
Sbjct: 334 M-GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITA 382
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/666 (36%), Positives = 380/666 (57%), Gaps = 68/666 (10%)
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
++ G +A+R+F + P T T L++C LGDL G+ V G
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V V +SLL++YA+ G A+ D +++ F +M
Sbjct: 143 VFVCSSLLHLYARWG------AMGDAVKV-------------------------FVRMPR 171
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD VTW++M+AG+ G +A+ M+ M +D +K D+ + + AC +++G
Sbjct: 172 RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG-VKGDEVVMIGVIQACTAARNVRMGAS 230
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H +++R ++V+ T+L+D Y K
Sbjct: 231 VHGHLLRHGM---------------------------------RMDVVTATSLVDMYAKN 257
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
G + A R+F + R+ V+W+AM+ G+ QNG + +A+ LFR+M G +P++ L + L
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S++ L G+ +H +R + + + + A I MYSK G++ +A+ +FN+I R +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISDR-DL 375
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
+ W +MI HG G++A+ LF+ M E G++PDH T+ +L+A +H GLVE+G+ ++
Sbjct: 376 ILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGR 435
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M N KI P H+ +VDLL R+GL++EA + + +M EP V W +LLS C +K L+
Sbjct: 436 MVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLE 495
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ A+ +L ++PD+ G + + NLY++ KW+ +RK MK G KK G S ++I+
Sbjct: 496 LGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIR 555
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
HVF +ED HPQR+ I +K+AK+ E+++MG++P T V HD+EE+VKEQ L +HSE
Sbjct: 556 GTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSE 615
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
+LAIAFGL++T T L I+KNLRVC DCH AIK+I K+ DREIVVRDA RFHHFK G+C
Sbjct: 616 RLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVC 675
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 676 SCRDYW 681
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 208/470 (44%), Gaps = 105/470 (22%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+CS ++L YA+ G + A +VF MP RD V+W+T++ + G+ +AI+M+ M +
Sbjct: 145 VCS--SLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
D V + + V+ +CTA ++ G VH +++ G+ V SL++MYAK G +
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A VF M +N SW ++MI+G++QNG
Sbjct: 263 ACRVFGLMVHRNDVSW-------------------------------SAMISGFAQNGQS 291
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
EAL +F NM + S ++PD L S L AC+N+ LKLG+ +H +I+R FD +G A
Sbjct: 292 DEALRLFRNM-QASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTA 349
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
I Y+K G + AQ +F+ + DRD++
Sbjct: 350 AIDMYSKCGSLASAQM---------------------------------LFNMISDRDLI 376
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W AM+ +G +DA+ LF+ M G +P++ T +++LS S ++ GK
Sbjct: 377 LWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFG-- 434
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
R+ N + ++ LA+ GL EEA
Sbjct: 435 -----------------------------RMVNHFKITPAEKHYVCLVDLLARSGLVEEA 465
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
L M +P +V +L+ C + +E G+ ++ N+ +++P
Sbjct: 466 SDLLTSM---KAEPTVAIWVALLSGCLNNKKLELGE---SIADNILELQP 509
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 64/280 (22%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
++Q+ +RN +G VH +++ G+ + V SL++ YAK
Sbjct: 215 VIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAK------------------ 256
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G LD+AC VF LM +R+ VSW+ +I + + G+ A+R+F M
Sbjct: 257 -------------NGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQA 303
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P + S L +C+ +G L G+ VH F+V+ C+ + + ++MY+K G
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGS--- 359
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
L A+ F+ + +RD++ WN+MIA +G
Sbjct: 360 ----------------------------LASAQMLFNMISDRDLILWNAMIACCGAHGRG 391
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
+AL +F M ++ ++PD T AS LSA ++ ++ GK
Sbjct: 392 QDALTLFQEM-NETGMRPDHATFASLLSALSHSGLVEEGK 430
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/666 (36%), Positives = 380/666 (57%), Gaps = 68/666 (10%)
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
++ G +A+R+F + P T T L++C LGDL G+ V G
Sbjct: 84 HSRRGSPASALRVF-RALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V V +SLL++YA+ G A+ D +++ F +M
Sbjct: 143 VFVCSSLLHLYARWG------AMGDAVKV-------------------------FVRMPR 171
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD VTW++M+AG+ G +A+ M+ M +D +K D+ + + AC +++G
Sbjct: 172 RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDG-VKGDEVVMIGVIQACTAARNVRMGAS 230
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H +++R ++V+ T+L+D Y K
Sbjct: 231 VHGHLLRHGM---------------------------------RMDVVTATSLVDMYAKN 257
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
G + A R+F + R+ V+W+AM+ G+ QNG + +A+ LFR+M G +P++ L + L
Sbjct: 258 GLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL 317
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S++ L G+ +H +R + + + + A I MYSK G++ +A+ +FN+I R +
Sbjct: 318 LACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGSLASAQMLFNMISDR-DL 375
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
+ W +MI HG G++A+ LF+ M E G++PDH T+ +L+A +H GLVE+G+ ++
Sbjct: 376 ILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGR 435
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M N KI P H+ +VDLL R+GL++EA + + +M EP V W +LLS C +K L+
Sbjct: 436 MVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLE 495
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ A+ +L ++PD+ G + + NLY++ KW+ +RK MK G KK G S ++I+
Sbjct: 496 LGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIR 555
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
HVF +ED HPQR+ I +K+AK+ E+++MG++P T V HD+EE+VKEQ L +HSE
Sbjct: 556 GTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSE 615
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
+LAIAFGL++T T L I+KNLRVC DCH AIK+I K+ DREIVVRDA RFHHFK G+C
Sbjct: 616 RLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVC 675
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 676 SCRDYW 681
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 212/484 (43%), Gaps = 103/484 (21%)
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
S + FD + +++L YA+ G + A +VF MP RD V+W+T++ + G
Sbjct: 129 SVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAG 188
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
+ +AI+M+ M +D V + + V+ +CTA ++ G VH +++ G+ V
Sbjct: 189 QPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTAT 248
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
SL++MYAK G +A VF M +N SW
Sbjct: 249 SLVDMYAKNGLLDVACRVFGLMVHRNDVSW------------------------------ 278
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
++MI+G++QNG EAL +F NM + S ++PD L S L AC+N+ LKLG+ +H +I
Sbjct: 279 -SAMISGFAQNGQSDEALRLFRNM-QASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R FD +G A I Y+K G + AQ
Sbjct: 337 VR-RFDFNCILGTAAIDMYSKCGSLASAQM------------------------------ 365
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
+F+ + DRD++ W AM+ +G +DA+ LF+ M G +P++ T +++LS
Sbjct: 366 ---LFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLS---- 418
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+L H + L G R+ N +
Sbjct: 419 --ALSHSGLVEEGKLWFG-------------------------RMVNHFKITPAEKHYVC 451
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
++ LA+ GL EEA L M +P +V +L+ C + +E G+ ++ N+
Sbjct: 452 LVDLLARSGLVEEASDLLTSM---KAEPTVAIWVALLSGCLNNKKLELGE---SIADNIL 505
Query: 545 KIKP 548
+++P
Sbjct: 506 ELQP 509
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 64/280 (22%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
++Q+ +RN +G VH +++ G+ + V SL++ YAK
Sbjct: 215 VIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAK------------------ 256
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G LD+AC VF LM +R+ VSW+ +I + + G+ A+R+F M
Sbjct: 257 -------------NGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQA 303
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P + S L +C+ +G L G+ VH F+V+ C+ + + ++MY+K G
Sbjct: 304 SGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDFNCI-LGTAAIDMYSKCGS--- 359
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
L A+ F+ + +RD++ WN+MIA +G
Sbjct: 360 ----------------------------LASAQMLFNMISDRDLILWNAMIACCGAHGRG 391
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
+AL +F M ++ ++PD T AS LSA ++ ++ GK
Sbjct: 392 QDALTLFQEM-NETGMRPDHATFASLLSALSHSGLVEEGK 430
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/704 (33%), Positives = 396/704 (56%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++ AY K L LA ++F M N+D+V++ +++ Y+ G + AI +F+E+ +
Sbjct: 179 NSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIK 238
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P+ FT ++L++ L D G++VH FV+KT V V N+LL+ Y+K
Sbjct: 239 PSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK---------- 288
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
++D F +M E D +++N +I Y+ NG E+
Sbjct: 289 ---------------------HDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESF 327
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F L+ + +F A+ LS + L++G+QIH I + V NAL+
Sbjct: 328 DLFRK-LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDM 386
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + AQK IFD++ + V WTA
Sbjct: 387 YAKCNGDKEAQK---------------------------------IFDNIACKSTVPWTA 413
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y Q G +++ + +F M R G + T +++L ++LAS+ G+Q+H+ +RSG
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ +AL+ Y+K G + A + F + R +VSW ++I A AQ+G + + F
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERN-SVSWNALISAYAQNGNVDGTLNSF 532
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M++ G KPD ++++ VL+AC+H G VE+ ++N M ++++ P H+ SMVD+L R
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP-DNSGAYSA 621
G EA + MP EP + W S+L++CR+HKN +L K AA++L +E ++ Y
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYIN 652
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
+ N+Y+ G+W++ A ++K+M+ GV+K +SWV+I+++ HVF D HP+ I K
Sbjct: 653 MSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRK 712
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + E+++ G+ PDT LHDV+E +K + L++HSE+ AIAF L++TP+ + + +MKN
Sbjct: 713 INALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKN 772
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR C DCH+AIK I ++V+REI+VRD++RFHHFK G+CSC DYW
Sbjct: 773 LRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 166/611 (27%), Positives = 297/611 (48%), Gaps = 85/611 (13%)
Query: 34 LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
L+ A I+K G + + N +N + + + +A +VFD+MP K S N ++S + K G
Sbjct: 29 LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+L A E+F+ M R +VSWT +I Y + + K A R++ +M + + P T+ ++L+
Sbjct: 89 KLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS 148
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
L + ++H+ V+K G + V NSL++ Y K
Sbjct: 149 GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCK--------------------- 187
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
+ L LA F M+ +D VT+NS++ GYS G + EA+ +F L +S
Sbjct: 188 ----------THCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE-LHNSG 236
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+KP FT A+ LSA L+ K G+Q+H ++++T F VGNAL+ Y+K
Sbjct: 237 IKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK-------- 288
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ ++ ++G ++F + + D +++ ++ Y NG
Sbjct: 289 ----------------------HDQVDEVG---KLFYEMPELDGISYNVVITSYAWNGQF 323
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
K++ +LFR + + + +LS+++S +L G+QIH A+ G V NAL
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENAL 383
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ MY+K A+++F+ I + TV WT+MI A Q G EE I +F M G+ D
Sbjct: 384 VDMYAKCNGDKEAQKIFDNIACKS-TVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPAD 442
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNM------MKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
T+ +L AC + + G++ +++ M NV+ ++++D + G +
Sbjct: 443 QATFASILRACANLASISLGRQLHSLLIRSGFMSNVYS-------GSALLDTYAKCGCMT 495
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IEPDNSGAYSALCN 624
+A MP E + V+W +L+SA + N+D G + + + ++ +PD S ++ ++ +
Sbjct: 496 DAIKSFGEMP-ERNSVSWNALISAYAQNGNVD-GTLNSFQQMIQSGYKPD-SVSFLSVLS 552
Query: 625 LYSSCGKWEDA 635
S CG E+A
Sbjct: 553 ACSHCGFVEEA 563
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/537 (22%), Positives = 226/537 (42%), Gaps = 135/537 (25%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P +F +A LL + + + G+ VH ++K +VF+ N+L+++Y+K + +
Sbjct: 235 SGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDE 294
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
K+F EMP S+N ++++YA W G+F
Sbjct: 295 VGKLFYEMPELDGISYNVVITSYA----------------------WN---------GQF 323
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
K + +F ++ + QF ++L+ T+ +L G+++H + G + V N+L
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENAL 383
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK + A+ +FD + K+ W
Sbjct: 384 VDMYAKCNGDKEAQKIFDNIACKSTVPW-------------------------------T 412
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MI+ Y Q G E + +F++M + + + D+ T AS L ACANL + LG+Q+H+ +IR
Sbjct: 413 AMISAYVQKGKHEEGINVFSDM-RRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ F + G+AL+ YAK G + A K
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIK-------------------------------- 499
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
F + +R+ V+W A++ Y QNG + F+ M++ G KP++ + ++LS S
Sbjct: 500 -SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
++ + N+ +++ + R+ +TSM+
Sbjct: 559 FVEEA----------------------------LWHFNSMTQIYEVTPKREH---YTSMV 587
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC----THGGLVEQGQRYYNM 539
L ++G +EA +L M E+ +P I + VL +C H + R +NM
Sbjct: 588 DVLCRNGRFDEAEKL---MTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/606 (39%), Positives = 359/606 (59%), Gaps = 46/606 (7%)
Query: 184 NSLLNMYAKV---GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
N LL YAK G A+ +FD + + S+N ++S H G +D A F M R
Sbjct: 42 NCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVR 101
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
DV +WN+M++G S+NG EA MF M +++
Sbjct: 102 DVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVS------------------------- 136
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
NA+++ A G + A+ + ++ + I +T ++ GY+ G
Sbjct: 137 ---------------WNAMVAARASSGDMGAAENLF-RNAPEKTDAILWTAMVSGYMDTG 180
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG-PKPNNYTLSAML 419
++ A F ++ R++V+W A++ GY +N DA+ +F++MV + +PN TLS++L
Sbjct: 181 NVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVL 240
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S+L++L G+Q+H ++ S++V +L++MY K G+++ A ++F+ +H ++
Sbjct: 241 LGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMH-TKDI 299
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
V+W +MI AQHG G +AI+LFE+M + G+ PD IT + VLTAC H GL + G + +
Sbjct: 300 VAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFET 359
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M+ + I+P H++ MVDLL RAGLL+ A N I +MP EP A+G+LL+ACRV+KNL+
Sbjct: 360 MQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLE 419
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
+ AA KL+ +P N+GAY L N+Y+ +W+D + +R+ MK V KT G+SW++I+
Sbjct: 420 FAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIK 479
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
H F D LHPQ D I++K+ ++ +K MG+ PD LHDVEE +K QML HSE
Sbjct: 480 GVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSE 539
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGLIST TLRI KNLR+C DCH+A K I K+ DREI++RD TRFHHF+ G C
Sbjct: 540 KLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHC 599
Query: 780 SCRDYW 785
SC DYW
Sbjct: 600 SCGDYW 605
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 211/466 (45%), Gaps = 81/466 (17%)
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAK---QGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
++ A++ F +KT ++N +L+ YAK GRL A +F+ +P+ D+VS+ T++ +
Sbjct: 23 LAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCH 82
Query: 121 NEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
G A R+F M V+D + + T+ S L+ A+ + A + + +S
Sbjct: 83 FACGDIDGAWRVFSTMPVRD--VTSWNTMVSGLSKNGAIEEAEA--MFRAMPARNAVS-- 136
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
N+++ A GD A+ +F K + W +VS ++ +G + A F M
Sbjct: 137 ---WNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMP 193
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
R++V+WN+++AGY +N +AL +F M++D+ ++P+ TL+S L C+NL L G+
Sbjct: 194 VRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGR 253
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
Q+H + ++ + VG +L+S Y K G ++ A K
Sbjct: 254 QVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACK------------------------ 289
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
+FD + +D+VAW AM+ GY Q+G + A++LF M EG P+ TL A+
Sbjct: 290 ---------LFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAV 340
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L+ D G Q + +N+ +
Sbjct: 341 LTACIHTGLCDFGIQC----------------------------FETMQEAYNI---EPQ 369
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
++ M+ L + GL E A+ + M +P Y +LTAC
Sbjct: 370 VDHYSCMVDLLCRAGLLERAVNMIHSM---PFEPHPSAYGTLLTAC 412
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 39/266 (14%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKT-LCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N+++ A + + A+ +F P KT W ++S Y G + A E F MP R+
Sbjct: 138 NAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNL 197
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHS 169
VSW ++ Y + R +A+R+F MV+D ++ P T++SVL C+ L L G++VH
Sbjct: 198 VSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQ 257
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
+ +K L + V SLL+MY K GD A +FD M K++ +WN
Sbjct: 258 WCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWN-------------- 303
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
+MI+GY+Q+G +A+ +F M KD + PD TL + L+AC
Sbjct: 304 -----------------AMISGYAQHGGGRKAIKLFEKM-KDEGVVPDWITLLAVLTACI 345
Query: 290 NLEKLKLGKQI-----HAYIIRTEFD 310
+ G Q AY I + D
Sbjct: 346 HTGLCDFGIQCFETMQEAYNIEPQVD 371
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 38/156 (24%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP +L S L L SNL + G+ VH +K L S+ + SL++ Y K
Sbjct: 231 PNPSTLSSVL-----LGCSNLSALG--FGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGD 283
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A K+FDEM K + +WN ++S YA+ G
Sbjct: 284 LDDACKLFDEMHTKDIVAWNAMISGYAQHGG----------------------------- 314
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
GR AI++F +M + V+P T+ +VL +C G
Sbjct: 315 GR--KAIKLFEKMKDEGVVPDWITLLAVLTACIHTG 348
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/699 (35%), Positives = 399/699 (57%), Gaps = 48/699 (6%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H K + ++ S+++ Y K ++ +A+KVF P +L WN+++ Y+K G
Sbjct: 136 LHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGS 195
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ A E+F MP RD+VSW T+I ++ G + F+EM P T SVL++
Sbjct: 196 VKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSA 255
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNS--LLNMYAKVGDEMMAKAVFDGMRLKNVS 212
CT++ DL G +H+ +V+ + C++V L++MYAK G
Sbjct: 256 CTSIYDLEWGAHLHARIVR--MEPCLDVYAGCGLIDMYAKCG------------------ 295
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
RL+ AR FD + E + V+W S+I G +Q G+ EAL +F N +++
Sbjct: 296 -------------RLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLF-NQMREV 341
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+ D+FTLA+ L C + + + +G+Q+HA+ I D++ PV NAL++ YAK G V A
Sbjct: 342 PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKA 401
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
E I ++I++T ++ + + GD+ AR FD + +R+V++W +ML Y Q G
Sbjct: 402 NHAFELMPIR--DIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGY 459
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
++ ++++ M+REG K + T S +S + LA L G QI A A + G +S++SV+N+
Sbjct: 460 WEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANS 519
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
++TMYS+ G I A+++F+ I + VSW +M+ AQ+G G + I++FE+ML +G P
Sbjct: 520 VVTMYSRCGQIEEAQKMFSSIVMKN-LVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVP 578
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D I+YV VL+ C+H G V +GQ Y+ M H I P HF MVDLLGRAG L++A N
Sbjct: 579 DQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNL 638
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I MP +P+ WG+LL+ACR+H N L ++A + LL ++ + G+Y L N+YS GK
Sbjct: 639 INQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKI 698
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+ N+RK M+ GV+K G SW+++ N+VHVF V+D HPQ ++ + + IK++
Sbjct: 699 QGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRMLEE---IIKKI 755
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
+ + A+V++ +HSEKLA+ LIS P
Sbjct: 756 EEIKNYANVMNSGRSH------NYHSEKLAVPLRLISLP 788
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 294/620 (47%), Gaps = 101/620 (16%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ + + +HA++I GL S+FL+N L+N Y+ IS A +VF + + SWNT++
Sbjct: 18 RSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMI 77
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
S +A G++ A ++F MP RDSVSW +++ Y G + I+
Sbjct: 78 SGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIK--------------- 122
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVK--TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ +LG L ++H F K G+ CV S+L+MY K G A+ VF
Sbjct: 123 -------ASGSLGYLKLALQLHGFAEKFDFGIDTCVET--SVLDMYIKCGAMDFAQKVFC 173
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
++ WN ++ + G + A F +M ERD V+WN+MI+ SQ+G+ E L
Sbjct: 174 RTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNT 233
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +P+ T AS LSAC ++ L+ G +HA I+R E G LI YA
Sbjct: 234 FLEMW-NQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYA 292
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G +E A+++ + G++ N +++T+L+
Sbjct: 293 KCGRLESARQVFD--GLTEHNAVSWTSLIG------------------------------ 320
Query: 385 VGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
G Q G ++A+ LF M RE P + +TL+ +L V S + G+Q+HA + G
Sbjct: 321 -GVAQAGFQEEALVLFNQM-REVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGL 378
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
SS+ V+NAL+TMY+K G++ A F L+ R + +SWT+MI A +Q G E+A + F+
Sbjct: 379 DSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMITAFSQAGDVEKAREYFD 437
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M E + I++ +L G E+G + Y M
Sbjct: 438 KMPERNV----ISWNSMLATYMQRGYWEEGLKVYIQM----------------------- 470
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSAL 622
L+E ++ D + + + +SAC L LG +I A+ L N +++
Sbjct: 471 --LREG--------VKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSV 520
Query: 623 CNLYSSCGKWEDAANIRKSM 642
+YS CG+ E+A + S+
Sbjct: 521 VTMYSRCGQIEEAQKMFSSI 540
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 248/500 (49%), Gaps = 37/500 (7%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ C +L + +K+H+ ++ GL + + N LLNMY+ G A VF G+ NV
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SWN ++S SG++ A F++M ERD V+WNSM++GY NG
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG--------------- 115
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L +T+ A +L LKL Q+H + + +F V +++ Y K G ++
Sbjct: 116 --------ELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 167
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AQK+ ++ L + +++ GY K G + A +F + +RD V+W M+ Q+G
Sbjct: 168 AQKVFCRTPNPSL--FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHG 225
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ + F M +G +PN+ T +++LS +S+ L+ G +HA +R +
Sbjct: 226 FGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGC 285
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI MY+K G + +AR+VF+ + VSWTS+I +AQ G EEA+ LF +M E+ +
Sbjct: 286 GLIDMYAKCGRLESARQVFDGLT-EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVA 344
Query: 512 PDHITYVGVLTACTHGGLVEQGQRY--YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
D T VL C + G++ + + + + P + ++V + + G + +A
Sbjct: 345 SDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVAN---ALVTMYAKCGDVWKA 401
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSS 628
+ E MP+ D+++W ++++A +++ + +K+ P+ N +++++ Y
Sbjct: 402 NHAFELMPIR-DIISWTAMITAFSQAGDVEKAREYFDKM----PERNVISWNSMLATYMQ 456
Query: 629 CGKWEDAANIRKSMKYVGVK 648
G WE+ + M GVK
Sbjct: 457 RGYWEEGLKVYIQMLREGVK 476
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 171/325 (52%), Gaps = 7/325 (2%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A +L L ++ +G+ +HA I GL SV + N+L+ YAK + A F+ MP+
Sbjct: 351 ATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPI 410
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ + SW +++A+++ G ++ A E F+ MP R+ +SW +++ TY + G ++ ++++++M
Sbjct: 411 RDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQM 470
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+++ V T ++ +++C L L G ++ + K G S V+V NS++ MY++ G
Sbjct: 471 LREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQI 530
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE----RDVVTWNSMIAGY 252
A+ +F + +KN+ SWN +++ + +G+ F++M+ D +++ S+++G
Sbjct: 531 EEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGC 590
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
S +G+ E F +M KD + P + +L+ K + I + F
Sbjct: 591 SHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNL---INQMPFKPN 647
Query: 313 GPVGNALISCYAKVGGVEIAQKIVE 337
+ AL++ G ++A+ V+
Sbjct: 648 AAIWGALLAACRIHGNTKLAELAVK 672
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 155/340 (45%), Gaps = 60/340 (17%)
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
++ CA+L + + +++HA +I ++ + N L++ Y+ G + A ++ GI +
Sbjct: 10 SMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVF--GGIMF 67
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
NV ++ T++ G+ G + A ++F+ + +RD V+W +M+ GY NG
Sbjct: 68 PNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG------------ 115
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
L A + S SL L Q+H A + V +++ MY K G +
Sbjct: 116 ----------ELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAM 165
Query: 464 NAARRVF------NLIHW------------------------RQETVSWTSMIVALAQHG 493
+ A++VF +L W ++TVSW +MI L+QHG
Sbjct: 166 DFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHG 225
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G E + F M G +P+ +TY VL+ACT +E G ++ + +++P +
Sbjct: 226 FGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGA---HLHARIVRMEPCLDVY 282
Query: 554 A--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
A ++D+ + G L+ A + + E + V+W SL+
Sbjct: 283 AGCGLIDMYAKCGRLESARQVFDGLT-EHNAVSWTSLIGG 321
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/642 (38%), Positives = 374/642 (58%), Gaps = 52/642 (8%)
Query: 149 TSVLASCTALGDLSAGKKVH-SFVVKTGLSGCVNVTNSLLNMYAKVGDEMM---AKAVFD 204
T +A+ GDL+ ++ S +KT N LL YAK + A+ +FD
Sbjct: 16 TVAVAAAVRRGDLAGAEEAFASTQLKT-----TTTYNCLLAGYAKASGLIRLADARRLFD 70
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ + S+N ++S H G +D AR F M +DV +WN+M++G S+NG EA M
Sbjct: 71 SIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAM 130
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M +++ NA+++ A
Sbjct: 131 FRIMPVRNAVS----------------------------------------WNAMVAALA 150
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
G + A+ + ++ + I +T ++ GY+ G++ A F ++ R++V+W A++
Sbjct: 151 CSGDMGAAEDLF-RNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVV 209
Query: 385 VGYEQNGLNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
GY +N DA+ +F++MV + +PN TLS++L S+L++L G+Q+H ++
Sbjct: 210 AGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPL 269
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ +++V +L++MY K G++N A +VF+ + ++ V+W +MI AQHG G +AI+LFE
Sbjct: 270 SRNVTVGTSLLSMYCKCGDLNDACKVFDEMS-TKDIVAWNAMISGYAQHGGGMQAIKLFE 328
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M + G+ PD IT + VLTAC H GL + G + + M+ +KI+P H++ MVDLL RA
Sbjct: 329 KMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRA 388
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
GLL+ A N I +MP EP A+G+LL+ACRV+KNL+ + AA KL+ +P N+GAY L
Sbjct: 389 GLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLA 448
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ KW D + +R+ MK V KT G+SW++I+ H F D LHPQ I++K+
Sbjct: 449 NIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHDKLD 508
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
++ +K MG+VPD LHDVE+ +K QML HSEKLAIAFGLIST TLRI KNLR
Sbjct: 509 RLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLR 568
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+C DCH+A K I K+ DREI++RD TRFHHF+ G CSC DYW
Sbjct: 569 ICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 183/349 (52%), Gaps = 20/349 (5%)
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQG---RLDLACEVFNLMPNRDSVSWTTIIVTY 120
++ A++ F +KT ++N +L+ YAK RL A +F+ +P+ D+VS+ T++ +
Sbjct: 28 LAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCH 87
Query: 121 NEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
G A R+F M V+D + + T+ S L+ A + +A ++ V+ +S
Sbjct: 88 FACGDIDGARRVFSTMPVKD--VTSWNTMVSGLSKNGASEEAAAMFRI--MPVRNAVS-- 141
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
N+++ A GD A+ +F K + W +VS ++ +G + A F M
Sbjct: 142 ---WNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMP 198
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
R++V+WN+++AGY +N +AL +F M++DS ++P+ TL+S L C+NL L G+
Sbjct: 199 VRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGR 258
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
Q+H + ++ VG +L+S Y K G + A K+ ++ +S +++A+ ++ GY +
Sbjct: 259 QVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDE--MSTKDIVAWNAMISGYAQ 316
Query: 359 IGDIGPARRIFDSLRDRDVVA-WT---AMLVGYEQNGLNKDAVELFRSM 403
G A ++F+ ++D VV W A+L GL ++ F +M
Sbjct: 317 HGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETM 365
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 39/266 (14%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKT-LCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N+++ A + + A+ +F P KT W ++S Y G + A E F MP R+
Sbjct: 143 NAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNL 202
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHS 169
VSW ++ Y + R +A+R+F MV+D ++ P T++SVL C+ L L G++VH
Sbjct: 203 VSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQ 262
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
+ +K LS V V SLL+MY K GD A VFD M K++ +W
Sbjct: 263 WCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAW--------------- 307
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
N+MI+GY+Q+G +A+ +F M KD + PD TL + L+AC
Sbjct: 308 ----------------NAMISGYAQHGGGMQAIKLFEKM-KDEGVVPDWITLLAVLTACI 350
Query: 290 NLEKLKLGKQI-----HAYIIRTEFD 310
+ G Q AY I + D
Sbjct: 351 HTGLCDFGIQCFETMQEAYKIEPQID 376
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVH-------ARIIKCGLHLSVFLKN-----SLMNFYAK 60
+EF+ + NL S N V V R+ K + S+ N S++ +
Sbjct: 191 MEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSN 250
Query: 61 TESISYAKKVFD---EMPV-KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTI 116
++ + ++V ++P+ + + ++LS Y K G L+ AC+VF+ M +D V+W +
Sbjct: 251 LSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAM 310
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
I Y + G AI++F +M + V+P T+ +VL +C G
Sbjct: 311 ISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTG 353
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/601 (39%), Positives = 361/601 (60%), Gaps = 20/601 (3%)
Query: 201 AVFDGMRLKNVSSWNVVVS----------LHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
A+F+GM L + +S ++ GR++ AR FD+M +RDVVTWN+MI
Sbjct: 129 ALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIE 188
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
Y + G EA +F M KDS++ PD+ L + +SAC ++ + I+ ++I +
Sbjct: 189 RYCRFGLLDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVR 247
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ AL++ YA G +++A + + +S N+ T ++ GY K G + AR IFD
Sbjct: 248 MDTHLLTALVTMYAGAGCMDMAMEFFRK--MSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+D+V WT M+ Y ++ ++A+ +F M G KP+ T+ +++S +L +LD
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
K +H +G S L + NALI MY+K G ++AAR VF + R VSW+SMI A A
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRN-VVSWSSMINAFA 424
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG +++ LF +M + ++P+ +T+VGVL C+H GLVE+G++ + M + + I P
Sbjct: 425 MHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKI 484
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+ MVDL GRA LL+EA IE+MP+ P+VV WGSL+SACRVH L+LG++AA+++L
Sbjct: 485 EHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILK 544
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EPD+ GA + N+Y+ +W+ IR M+ V K +G S + + K H F + D
Sbjct: 545 LEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDK 604
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
H Q + IY K+ ++ ++K G+VPD SVL DVEE+ K+ ++ HSEKLA+ FGL++
Sbjct: 605 RHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNK 664
Query: 731 PENT------TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+ +RI+KNLRVC DCH+ K + K+ + EI+VRD TRFH +K GLCSCRDY
Sbjct: 665 EKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDY 724
Query: 785 W 785
W
Sbjct: 725 W 725
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 213/434 (49%), Gaps = 43/434 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ YA GR++ A VF+ M RD V+W T+I Y G A ++F EM V+P
Sbjct: 155 LMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPD 214
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ + +++++C G++ + ++ F+++ + ++ +L+ MYA G MA F
Sbjct: 215 EMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFR 274
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M ++N+ +VS + +GRLD AR FDQ +D+V W +MI+ Y+++ + EAL +
Sbjct: 275 KMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRV 334
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M S +KPD T+ S +SAC NL L K +H Y ++ P+ NALI+ YA
Sbjct: 335 FEEMCC-SGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYA 393
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K GG++ A R +F+ + R+VV+W++M+
Sbjct: 394 KCGGLDAA---------------------------------RDVFEKMPTRNVVSWSSMI 420
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
+ +G D++ LF M +E +PN T +L S ++ GK+I AS
Sbjct: 421 NAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNI 480
Query: 445 S-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
+ + ++ ++ +A + A V + V W S++ A HG LGE A +
Sbjct: 481 TPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAK 540
Query: 501 LFERMLELGIKPDH 514
R+L+L +PDH
Sbjct: 541 ---RILKL--EPDH 549
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 174/359 (48%), Gaps = 42/359 (11%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
++ N + ++ +I+ + + L +L+ YA + A + F +M V+ L
Sbjct: 227 RTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTA 286
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S Y+K GRLD A +F+ +D V WTT+I Y E + A+R+F EM + P
Sbjct: 287 MVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPD 346
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T+ SV+++C LG L K VH + GL + + N+L+NMYAK G A+ VF+
Sbjct: 347 VVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFE 406
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M +NV V+W+SMI ++ +G ++L +
Sbjct: 407 KMPTRNV-------------------------------VSWSSMINAFAMHGEASDSLSL 435
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISC 322
FA M K +++P++ T L C++ ++ GK+I A + E++ T + + ++
Sbjct: 436 FAQM-KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT-DEYNITPKIEHYGCMVDL 493
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD-----GYIKIGDIGPARRIFDSLRDRD 376
+ + + A +++E ++ NV+ + +L+ G +++G++ A+RI D D
Sbjct: 494 FGRANLLREALEVIESMPMA-PNVVIWGSLMSACRVHGELELGELA-AKRILKLEPDHD 550
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+ + ++L ++G + + ++ + G + + + +L S +++L G ++H
Sbjct: 80 IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGF 139
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A + S V L+ MY+ G IN AR VF+ + R + V+W +MI + GL +E
Sbjct: 140 AFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQR-DVVTWNTMIERYCRFGLLDE 198
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A +LFE M + + PD + +++AC G + + Y+ + + ++ ++V
Sbjct: 199 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIE-NDVRMDTHLLTALV 257
Query: 558 DLLGRAGLLQEAYNFIENM 576
+ AG + A F M
Sbjct: 258 TMYAGAGCMDMAMEFFRKM 276
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 110/234 (47%), Gaps = 12/234 (5%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLA---SLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
M P+P+ + +SA ++ L+ SL+H KQ+HA LR+ L+ ++ S
Sbjct: 1 MTLPPPRPS-FAVSAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSS 59
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+ N++ A +F+ I E++ + S++ L++ G I ++R+ +G + D I++
Sbjct: 60 SINLSYALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPP 119
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
+L A + + +G + + + P ++D+ G + A N + M +
Sbjct: 120 ILKAVSKVSALFEGMELHGFAFKIATLS-DPFVETGLMDMYAACGRINYARNVFDEMS-Q 177
Query: 580 PDVVAWGSLLSA-CRVHKNLDLGKIAAE-KLLLIEPDNSGAYSALCNLYSSCGK 631
DVV W +++ CR + K+ E K + PD LCN+ S+CG+
Sbjct: 178 RDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDE----MILCNIVSACGR 227
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/726 (34%), Positives = 408/726 (56%), Gaps = 71/726 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ F + + + YA VF+ + L WNT+ +
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A++++V M+ +LP +T
Sbjct: 67 AL---------------SSDPVS----------------ALKLYVCMISLGLLPNSYTFP 95
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L SC G+++H V+K G + V SL++MY + G A VFD +
Sbjct: 96 FLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHR 155
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ ++ + G ++ A+ FD++ +DVV+WN+MI+GY++ G EAL +F +M+
Sbjct: 156 DVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 215
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K ++++PD+ T+ + +SACA ++LG+Q+H++I F + + NALI Y+K
Sbjct: 216 K-TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC--- 271
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
G++ A +F+ L +DV++W ++ GY
Sbjct: 272 ------------------------------GELETACGLFEGLPYKDVISWNTLIGGYTH 301
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH + G A++
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS 361
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S+ +LI MY+K G+I AA +VFN I + SW +MI A HG + + +F RM +
Sbjct: 362 SLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDIFSRMRK 420
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI+PD IT+VG+L+AC+H G+++ G+ + M +K+ P H+ M+DLLG +GL +
Sbjct: 421 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 480
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I M +EPD V W SLL AC++H N++LG+ A+ L+ IEP+N G+Y L N+Y+
Sbjct: 481 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYA 540
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G+W + AN R + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 541 TAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 600
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++E GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 601 LLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 660
Query: 748 CHSAIK 753
CH A K
Sbjct: 661 CHEAYK 666
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 237/489 (48%), Gaps = 67/489 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S KS+ G+ +H ++K G L +++ SL++ Y + + A KVFDE P
Sbjct: 94 FPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESP 153
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ ++ YA +G ++ A ++F+ +P +D VSW +I Y E G +K A+ +F +
Sbjct: 154 HRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 213
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +V+++C G + G++VHS++ G + + N+L+++Y+K G+
Sbjct: 214 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGE 273
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+G+ K+V SW N++I GY+
Sbjct: 274 LETACGLFEGLPYKDVISW-------------------------------NTLIGGYTHM 302
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI +
Sbjct: 303 NLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK--------- 352
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
++ GV A + T+L+D Y K GDI A ++F+S+ +
Sbjct: 353 ---------RLKGVANASSLR-------------TSLIDMYAKCGDIEAAHQVFNSILHK 390
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ +W AM+ G+ +G + ++F M + G +P++ T +LS S LD G+ I
Sbjct: 391 SLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF 450
Query: 436 ASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
S + + + L +I + +G A + N + + V W S++ A HG
Sbjct: 451 RSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN 510
Query: 494 --LGEEAIQ 500
LGE Q
Sbjct: 511 VELGESFAQ 519
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 73/292 (25%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIK--CGLHLSVFLKNSLMNFYA 59
ETPN +++S L AHL + +G+ +H I K G+ + L+ SL++ YA
Sbjct: 320 ETPNDVTMLSILPACAHLGAID-------IGRWIHVYIDKRLKGVANASSLRTSLIDMYA 372
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
K I A +VF+ + K+L SWN ++ +A GR D + ++F+ M
Sbjct: 373 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMR------------- 419
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
KN I P T +L++C+ G L G+ + + +
Sbjct: 420 -------KNGIE-----------PDDITFVGLLSACSHSGMLDLGRHIFRSMTQ------ 455
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM-I 238
D + + ++ L HSG A + M +
Sbjct: 456 ------------------------DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 491
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFA-NMLKDSSLKPDKFTLASTLSACA 289
E D V W S++ +G + E FA N++K P + L S + A A
Sbjct: 492 EPDGVIWCSLLKACKMHG-NVELGESFAQNLIKIEPENPGSYVLLSNIYATA 542
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 263/719 (36%), Positives = 405/719 (56%), Gaps = 79/719 (10%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+FN N + +T+++ Y+ + + M+ +M V P F ++ S
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG---- 111
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG-------------------------- 194
+ G H+ V+K G V N++++MYA++G
Sbjct: 112 -TGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 195 -------DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
E A+ +FD M +NV +W +V+ + L+ AR FD M ER VV+WN+
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M++GY+QNG EAL +F M+ ++ ++PD+ T + +SAC++ L A ++RT
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMV-NAGIEPDETTWVTVISACSSRGDPCLA----ASLVRT 285
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ QK ++ LN T LLD Y K GD+ AR+
Sbjct: 286 -----------------------LHQKRIQ------LNCFVRTALLDMYAKFGDLDSARK 316
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLA 426
+F+++ R+VV W +M+ GY QNG + A+ELF+ M+ P+ T+ +++S L
Sbjct: 317 LFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLG 376
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+L+ G + + S+S NA+I MYS+ G++ A+RVF + R + VS+ ++I
Sbjct: 377 ALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLI 435
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A HG G EAI L M E GI+PD +T++GVLTAC+H GL+E+G++ + +K+
Sbjct: 436 SGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD---- 491
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
P H+A MVDLLGR G L++A +E MP+EP +GSLL+A R+HK ++LG++AA
Sbjct: 492 -PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAAN 550
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
KL +EPDNSG + L N+Y+S G+W+D IR++MK GVKKT G+SWV+ K+H F
Sbjct: 551 KLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFI 610
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D H + D IY + ++ +++E G++ D + VL DVEE+ KE+++ HSEKLAI +
Sbjct: 611 VADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYA 670
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+ + +R++KNLRVC DCH+AIK I KL R I+VRD RFH F GLCSC+DYW
Sbjct: 671 LLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 139/571 (24%), Positives = 240/571 (42%), Gaps = 136/571 (23%)
Query: 4 PNPPSLISPLEFYAHL------------LQSNLKSRNPFV-----------GKLVHARII 40
PN S L FY+HL +Q + FV G HA ++
Sbjct: 63 PNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVL 122
Query: 41 KCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE--------------------------- 73
K G F++N++++ YA+ I +A+KVFDE
Sbjct: 123 KLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQA 182
Query: 74 ------MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
MP + + +W +++ YAK L+ A F+ MP R VSW ++ Y + G +
Sbjct: 183 QWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAE 242
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS-AGKKVHSFVVKTGLSGCVNVTNSL 186
A+R+F EMV + P + T +V+++C++ GD A V + K C V +L
Sbjct: 243 EALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCF-VRTAL 301
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
L+MYAK GD A+ +F+ M +NV +WN
Sbjct: 302 LDMYAKFGDLDSARKLFNTMPGRNVVTWN------------------------------- 330
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
SMIAGY+QNG A+ +F M+ L PD+ T+ S +SAC +L L+LG + ++
Sbjct: 331 SMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE 390
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ + NA+I Y++ G +E A+++ ++
Sbjct: 391 NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQE---------------------------- 422
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+ RDVV++ ++ G+ +G +A+ L +M G +P+ T +L+ S
Sbjct: 423 -----MATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAG 477
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
L+ G+++ S + ++ ++ + + G + A+R + + S++
Sbjct: 478 LLEEGRKV----FESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 533
Query: 487 VALAQHG---LGE-EAIQLFERMLELGIKPD 513
A H LGE A +LFE ++PD
Sbjct: 534 NASRIHKQVELGELAANKLFE------LEPD 558
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 276/862 (32%), Positives = 429/862 (49%), Gaps = 153/862 (17%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
++ NP IS L + RN + VHA+ G+ ++ + N L+ FY+
Sbjct: 76 LQRLNPKFYISAL----------VNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSY 125
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQG-----------------RLD------- 96
++ A +FD M V+ SW+ ++ +AK G R D
Sbjct: 126 YRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFV 185
Query: 97 -LACE------------------------VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
AC +F+ M RD V+WT +I Y E G+ ++
Sbjct: 186 IRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLV 245
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
+F +M ++ V+P + + +V+ +C LG + + + ++ + V + ++++MYA
Sbjct: 246 LFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYA 305
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K G ++ AR FD+M E++V++W++MIA
Sbjct: 306 KCGC-------------------------------VESAREIFDRMEEKNVISWSAMIAA 334
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y +G +AL +F ML S + PDK TLAS L AC N L +Q+HA
Sbjct: 335 YGYHGQGRKALDLFRMMLS-SGMLPDKITLASLLYACINCRNLTQVRQVHAQ-------- 385
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
A V G+ N+I L+ Y + A +FD
Sbjct: 386 ------------ASVHGM-------------LQNLIVANKLVHFYSYYRALDDAYGLFDG 420
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS--------------- 416
+ RD V+W+ M+ G+ + G + FR ++R G +P+NYTL
Sbjct: 421 MCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKM 480
Query: 417 ----------AMLSV---SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
AM++V + L ++ + I R + + A+I M++K G +
Sbjct: 481 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 540
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
+AR +F+ + + +SW++MI A HG G +A+ LF ML GI P+ IT V +L A
Sbjct: 541 ESAREIFDRME-EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 599
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLVE+G R++++M + ++ H+ +VDLLGRAG L EA IE+M +E D
Sbjct: 600 CSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEG 659
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
WG+ L ACR HK++ L + AA LL ++P N G Y L N+Y++ G+WED A R M
Sbjct: 660 LWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMS 719
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
+KK G++W+++ NK H F V D HP+ IY + + ++++ +G+VPDT VLH
Sbjct: 720 QRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLH 779
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
DV+E++K +L HSEKLAIAFGLI+TPE+T +RI+KNLRVC DCH+ K + + R I
Sbjct: 780 DVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVI 839
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRDA RFHHFK+G CSC DYW
Sbjct: 840 IVRDANRFHHFKEGACSCGDYW 861
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 53/277 (19%)
Query: 387 YEQNGLN----KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+ Q LN ++ F + R PK + +SA+++ + L +Q+HA A G
Sbjct: 56 FRQTSLNLHNREEESSKFHFLQRLNPK---FYISALVNCRN----LTQVRQVHAQASVHG 108
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ V+N LI YS ++ A +F+ + R ++VSW+ M+ A+ G F
Sbjct: 109 MLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVGGFAKVGDYINCFGTF 167
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++ G +PD+ T V+ AC +KN+ ++VD+ +
Sbjct: 168 RELIRCGARPDNYTLPFVIRACRD-------------LKNLQ---------MALVDMYVK 205
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE--------PD 614
+++A + M E D+V W ++ + GK A E L+L E PD
Sbjct: 206 CREIEDARFLFDKMQ-ERDLVTWTVMIGG-----YAECGK-ANESLVLFEKMREEGVVPD 258
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQ 651
A+ + +C K R Y+ KK Q
Sbjct: 259 K----VAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 291
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 378/653 (57%), Gaps = 40/653 (6%)
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+Q Q ++ + S+L CT + K+VH+ +++ GLS C V L+ M KV
Sbjct: 34 LQHQRKLLEWRLMSILHDCTLFSQI---KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVP 90
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
M S+ ++V F Q+ + W +MI GY+ G
Sbjct: 91 M--------------GSYPLLV---------------FGQVNYPNPFLWTAMIRGYALQG 121
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY-IIRTEFDATGPV 315
E+ + M +D + P FT ++ AC + LGKQ+HA I+ F + V
Sbjct: 122 LLSESTNFYTRMRRDG-VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN++I Y K G + A+K+ ++ +S +V+++T L+ Y K GD+ A +FD L +
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDE--MSERDVVSWTELIVAYAKYGDMESASGLFDDLPLK 238
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+VAWTAM+ GY QNG K+A+E F+ M G + + TL+ ++S + L ++ H I
Sbjct: 239 DMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIR 298
Query: 436 ASALRSGEASS--LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
A RSG S + V +ALI MYSK G+ + A +VF ++ R S++SMI+ A HG
Sbjct: 299 DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN-VFSYSSMILGYAMHG 357
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
A+QLF ML+ I+P+ +T++G+L+AC+H GLVEQG++ + M+ + P+P H+
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
A MVDLLGRAG L+EA + ++ MP+EP+ WG+LL ACR+H N D+ +IAA +L +EP
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP 477
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN-KVHVFGVEDWLH 672
+ G Y L N+Y+S G+WE+ + +RK ++ G KK G SW + +N ++H F D H
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTH 537
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
P+ I + ++ + ++ G+ P+ S +D+ +D KE++L HSEKLA+A+GL+ T
Sbjct: 538 PRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEA 597
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T++IMKN+R+C DCH+ + ++ REI+VRD RFHHF G CSC ++W
Sbjct: 598 GDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 207/467 (44%), Gaps = 71/467 (15%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESI--SYAKKVFDEMPVKTLCSWNTILSAYA 90
K VHA II+ GL ++ L+ K + SY VF ++ W ++ YA
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYA 118
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
QG L + + M +D V P FT ++
Sbjct: 119 LQGLLS-------------------------------ESTNFYTRMRRDGVGPVSFTFSA 147
Query: 151 VLASCTALGDLSAGKKVHS-FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+ +C A ++ GK+VH+ ++ G + + V NS++++Y K G A+ VFD M +
Sbjct: 148 LFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSER 207
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V SW ++ + G ++ A FD + +D+V W +M+ GY+QNG EAL F M
Sbjct: 208 DVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM- 266
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--VGNALISCYAKVG 327
+D ++ D+ TLA +SACA L +K I R+ F +G VG+ALI Y+K G
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A K +F+ +++R+V ++++M++GY
Sbjct: 327 SPDEAYK---------------------------------VFEVMKERNVFSYSSMILGY 353
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASS 446
+G A++LF M++ +PN T +LS S ++ G+Q+ A + G A S
Sbjct: 354 AMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 413
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ + +AG + A + + W +++ A HG
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 173/334 (51%), Gaps = 39/334 (11%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYA 67
+ P+ F ++ L ++ + N +GK VHA+ I G S +++ NS+++ Y K + A
Sbjct: 138 VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCA 197
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+KVFDEM + + SW ++ AYAK G ++ A +F+ +P +D V+WT ++ Y + GR K
Sbjct: 198 RKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPK 257
Query: 128 NAIRMFVEMVQDQVLPT-QFTVTSVLASCTALGDLSAGKKVHSFVVKTGL--SGCVNVTN 184
A+ F +M QD + T + T+ V+++C LG + + ++G SG V V +
Sbjct: 258 EALEYFQKM-QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGS 316
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L++MY+K G A VF+ M+ +NV S
Sbjct: 317 ALIDMYSKCGSPDEAYKVFEVMKERNVFS------------------------------- 345
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
++SMI GY+ +G AL +F +MLK + ++P+K T LSAC++ ++ G+Q+ A +
Sbjct: 346 YSSMILGYAMHGRAHSALQLFHDMLK-TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404
Query: 305 IRTEFDATGPVGNA-LISCYAKVGGVEIAQKIVE 337
+ A P A ++ + G +E A +V+
Sbjct: 405 EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVK 438
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/706 (36%), Positives = 421/706 (59%), Gaps = 69/706 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK +D A +F LMP++D+VSW +II + RF+ A+ F M ++ ++
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMV 453
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P++F+V S L+SC +LG + G+++H +K GL V+V+N+LL +YA+
Sbjct: 454 PSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAE---------- 503
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEA 261
+ ++ + F M E D V+WNS I + + +A
Sbjct: 504 ---------------------TDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQA 542
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ F M++ + KP++ T + LSA ++L L+LG+QIHA I++ + N L++
Sbjct: 543 IKYFLEMMQ-AGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLA 601
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K +E + I F+ + + RD V+W
Sbjct: 602 FYGKCEQMEDCE-------------IIFSRMSE-------------------RRDEVSWN 629
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY NG+ A+ L M+++G + +++TL+ +LS +S+A+L+ G ++HA A+R+
Sbjct: 630 AMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRA 689
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ + V +AL+ MY+K G I+ A R F L+ R SW SMI A+HG G +A++L
Sbjct: 690 CLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRN-IYSWNSMISGYARHGHGGKALKL 748
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M + G PDH+T+VGVL+AC+H GLV++G ++ M V+++ P HF+ MVDLLG
Sbjct: 749 FTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLG 808
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CRVH-KNLDLGKIAAEKLLLIEPDNSGAY 619
RAG +++ FI+ MP+ P+ + W ++L A CR + +N +LG+ AA+ L+ +EP N+ Y
Sbjct: 809 RAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNY 868
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N++++ GKWED R +M+ VKK G SWV +++ VHVF D HP+++ IY
Sbjct: 869 VLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIY 928
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+K+ +I ++++++G+VP+T L+D+E + KE++L +HSEKLAIAF L E +RI+
Sbjct: 929 DKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSE-LPIRII 987
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCH+A K+I +V+R+I++RD+ RFHHF G+CSC+DYW
Sbjct: 988 KNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/571 (24%), Positives = 263/571 (46%), Gaps = 114/571 (19%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H +I K GL VF N+L+N + + ++ A+K+FDEMP K L SW+ ++S YA+ G
Sbjct: 61 LHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGM 120
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
D AC +F ++ +LP + + S L +
Sbjct: 121 PDEACMLFR-------------------------------GIISAGLLPNHYAIGSALRA 149
Query: 155 CTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM-MAKAVFDGMRLKNV 211
C LG L G ++H + K+ + + ++N L++MY+ + A+ VF+ +++K
Sbjct: 150 CQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTS 209
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+SWN ++S+ Y + G A +F++M ++
Sbjct: 210 ASWNSIISV-------------------------------YCRRGDAISAFKLFSSMQRE 238
Query: 272 SS---LKPDKFTLASTLS-ACANLE-KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++ +P+++T S ++ AC+ ++ L L +Q+ A I ++ F VG+AL+S +A+
Sbjct: 239 ATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARY 298
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G L+D A+ IF+ + DR+ V ++VG
Sbjct: 299 G------------------------LIDS---------AKMIFEQMDDRNAVTMNGLMVG 325
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK----QIHASALRSG 442
+ ++A ++F+ M ++ + N + + +LS + ++L GK ++HA +R+
Sbjct: 326 LARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNA 384
Query: 443 EASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ + NAL+ +Y+K I+ AR +F L+ ++TVSW S+I L + EEA+
Sbjct: 385 LVDVWILIGNALVNLYAKCNAIDNARSIFQLMP-SKDTVSWNSIISGLDHNERFEEAVAC 443
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLL 560
F M G+ P + + L++C G + GQ+ + +K + + S+ +++ L
Sbjct: 444 FHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSN--ALLTLY 501
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++E MP E D V+W S + A
Sbjct: 502 AETDCMEEYQKVFFLMP-EYDQVSWNSFIGA 531
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 175/378 (46%), Gaps = 69/378 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H IKCGL L V + N+L+ YA+T+ + +KVF MP SWN+ + A A
Sbjct: 474 LGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALA 533
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
S +++ AI+ F+EM+Q P + T +
Sbjct: 534 --------------------TSEASVL----------QAIKYFLEMMQAGWKPNRVTFIN 563
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RLK 209
+L++ ++L L G+++H+ ++K ++ + N+LL Y K + +F M +
Sbjct: 564 ILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERR 623
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+ SWN ++S GY NG +A+G+ M+
Sbjct: 624 DEVSWNAMIS-------------------------------GYIHNGILHKAMGLVWLMM 652
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + D FTLA+ LSACA++ L+ G ++HA IR +A VG+AL+ YAK G +
Sbjct: 653 QKGQ-RLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKI 711
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLV 385
+ A + E + N+ ++ +++ GY + G G A ++F ++ D V + +L
Sbjct: 712 DYASRFFELMPVR--NIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLS 769
Query: 386 GYEQNGLNKDAVELFRSM 403
GL + E F+SM
Sbjct: 770 ACSHVGLVDEGFEHFKSM 787
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 209/451 (46%), Gaps = 85/451 (18%)
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SCT + ++H + KTGL+ V N+L+N++ + G+ + A+ +FD M KN+ S
Sbjct: 52 SCT----VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVS 107
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
W+ +VS GY+QNG EA +F ++ +
Sbjct: 108 WSCLVS-------------------------------GYAQNGMPDEACMLFRGIIS-AG 135
Query: 274 LKPDKFTLASTLSACANL--EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L P+ + + S L AC L LKLG +IH I ++ + + + N L+S Y+
Sbjct: 136 LLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCS---- 191
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
I ARR+F+ ++ + +W +++ Y + G
Sbjct: 192 ----------------------------ASIDDARRVFEEIKMKTSASWNSIISVYCRRG 223
Query: 392 LNKDAVELFRSMVREGP----KPNNYTLSAMLSVSSSL--ASLDHGKQIHASALRSGEAS 445
A +LF SM RE +PN YT ++++V+ SL L +Q+ A +S
Sbjct: 224 DAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVK 283
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
L V +AL++ +++ G I++A+ +F + R V+ ++V LA+ GEEA ++F+ M
Sbjct: 284 DLYVGSALVSGFARYGLIDSAKMIFEQMDDRN-AVTMNGLMVGLARQHQGEEAAKIFKEM 342
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQR-----YYNMMKNVHKIKPTPSHFASMVDLL 560
+L ++ + +Y +L+A T +++G+R + +++N + ++V+L
Sbjct: 343 KDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNA-LVDVWILIGNALVNLY 400
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + A + + MP D V+W S++S
Sbjct: 401 AKCNAIDNARSIFQLMP-SKDTVSWNSIISG 430
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 16/294 (5%)
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+V TL++ +++ G++ A+++FD + +++V+W+ ++ GY QNG+ +A LFR ++
Sbjct: 73 DVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGII 132
Query: 405 REGPKPNNYTLSAMLSVSSSLAS--LDHGKQIHASALRSGEASSLSVSNALITMYSK-AG 461
G PN+Y + + L L L G +IH +S AS + +SN L++MYS +
Sbjct: 133 SAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSA 192
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM----LELGIKPDHITY 517
+I+ ARRVF I + + SW S+I + G A +LF M EL +P+ T+
Sbjct: 193 SIDDARRVFEEIKMKT-SASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTF 251
Query: 518 VGVLT-ACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFI 573
++T AC+ LV+ G M+ + K + +++V R GL+ A
Sbjct: 252 CSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIF 308
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
E M V G ++ R H+ + KI E L+E N+ +Y+ L + ++
Sbjct: 309 EQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEI-NASSYAVLLSAFT 361
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 77/299 (25%)
Query: 8 SLISPLEFYAHLLQSNLK-SRNPFV--------------GKLVHARIIKCGLHLSVFLKN 52
S++ ++++ ++Q+ K +R F+ G+ +HA I+K + ++N
Sbjct: 538 SVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIEN 597
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+L+ FY K E + + +F M + RD VS
Sbjct: 598 TLLAFYGKCEQMEDCEIIFSRMSER------------------------------RDEVS 627
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W +I Y G A+ + M+Q FT+ +VL++C ++ L G +VH+ +
Sbjct: 628 WNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAI 687
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
+ L V V ++L++MYAK G A F+ M ++N+ SW
Sbjct: 688 RACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSW------------------ 729
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
NSMI+GY+++G+ +AL +F M + L PD T LSAC+++
Sbjct: 730 -------------NSMISGYARHGHGGKALKLFTQMKQHGQL-PDHVTFVGVLSACSHV 774
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/784 (32%), Positives = 409/784 (52%), Gaps = 111/784 (14%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
Y LL +++ + + VH + K G +F+ SL+N Y + + A+++FD M
Sbjct: 80 MYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGM 139
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P R+ V+WT ++ Y + + +FV
Sbjct: 140 -------------------------------PERNVVTWTALVTGYTLNSQPALGLEVFV 168
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM++ P+ +T+ + L +C A D+ GK+VH + +K G ++ NSL ++YAK+G
Sbjct: 169 EMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLG 228
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
LD A F ++ E++V+TW +MI+ ++
Sbjct: 229 S-------------------------------LDSALRAFWRIPEKNVITWTTMISACAE 257
Query: 255 NGYDFE-ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+ E + +F +ML D + P++FTL S +S C L LGKQ+ A+ + +
Sbjct: 258 DEECVELGMSLFIDMLMDGVM-PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
PV N+ + YL Y++ G+ A R+F+ +
Sbjct: 317 PVKNSTM----------------------YL-----------YLRKGETDEAMRLFEQME 343
Query: 374 DRDVVAWTAMLVGYEQ--NGLNKD---------AVELFRSMVREGPKPNNYTLSAMLSVS 422
D ++ W AM+ GY Q + D A+ +FR + R KP+ +T S++LSV
Sbjct: 344 DASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVC 403
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
S++ +L+ G+QIHA ++SG S + V++AL+ MY+K G I A + F + R V+W
Sbjct: 404 SAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTW 462
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
TSMI +QHG +EAIQLFE M G++P+ IT+V +L+AC++ GLVE+ + Y++MMK
Sbjct: 463 TSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK 522
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ I+P H+ M+D+ R G +++A++FI+ EP+ W SL++ CR H N++L
Sbjct: 523 EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAF 582
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
AA+KLL ++P Y L N+Y S +W+D A +RK MK V + SW+ I++KV
Sbjct: 583 YAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKV 642
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM--LRHHSEK 720
+ F D HPQ +Y + + ++ K +G+ P + L D E+D K L+HHSE+
Sbjct: 643 YFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSER 702
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+A GL+ TP T+R+ KN+ +C DCHS+IK L +REI+VRD+ R H FK G CS
Sbjct: 703 LAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCS 762
Query: 781 CRDY 784
C D+
Sbjct: 763 CGDF 766
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
+M+ EG + +L SL + +H ++G ++ + V+ +L+ Y +
Sbjct: 68 TMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCS 127
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
ARR+F+ + R V+WT+++ + +++F MLE+G P H T L
Sbjct: 128 AARDARRLFDGMPERN-VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC V+ G++ + + + S S+ L + G L A +P E +
Sbjct: 187 NACLASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKN 244
Query: 582 VVAWGSLLSAC 592
V+ W +++SAC
Sbjct: 245 VITWTTMISAC 255
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/702 (35%), Positives = 393/702 (55%), Gaps = 69/702 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++AY K G ++ A +F+ + D VSW ++I G N + +F++M+ V
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ SVL +C +G+LS G+ +H F VK S V +N+LL+MY+K G+
Sbjct: 294 VDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGN------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ A F +M + +V+W S+IA Y + G +A+
Sbjct: 347 ------------------------LNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAI 382
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G+F M + ++PD +T+ S + ACA L G+ +H+Y+I+ + PV NALI+
Sbjct: 383 GLFDEM-QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINM 441
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G VE+ AR +F + +D+V+W
Sbjct: 442 YAKCGS-------VEE--------------------------ARLVFSKIPVKDIVSWNT 468
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY QN L +A+ELF M ++ KP++ T++ +L + LA+LD G++IH LR G
Sbjct: 469 MIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRG 527
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S L V+ AL+ MY+K G + A+ +F++I +++ +SWT MI HG G EAI F
Sbjct: 528 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTF 586
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M GI+PD ++ +L AC+H GL+ +G +++N M+N ++P H+A +VDLL R
Sbjct: 587 NEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 646
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
G L +AY FIE+MP++PD WG LLS CR+H ++ L + AE + +EPDN+ Y L
Sbjct: 647 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 706
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ KWE+ +RK M+ G K+ G SW+++ K ++F + HPQ I +
Sbjct: 707 ANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLL 766
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR-HHSEKLAIAFGLISTPENTTLRIMKN 741
+K+ +++ + VL + E+D++++M++ HSEK A+AFG+++ P T+R+ KN
Sbjct: 767 SKLTMQMQNEDYSSMFRYVLIN-EDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKN 825
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
RVC DCH KF+ K EIV+RD+ RFHHFK GLCSCRD
Sbjct: 826 RRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 159/390 (40%), Gaps = 68/390 (17%)
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
+ S L CA + L+ GK++H+ II +G L+
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFM----------------- 138
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
Y+ GD+ R+IFD + + V W ++ Y + G +++V L
Sbjct: 139 ----------------YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F+ M + G N YT + +L ++L + K++H L+ G S+ +V N+LI Y K
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G + +A +F+ + + VSW SMI +G +++F +ML LG++ D T V
Sbjct: 243 FGGVESAHNLFDELS-EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVS 301
Query: 520 VLTACTHGGLVEQGQRYY-------------------NMMKNVHKIKPTPSHFASMVDL- 559
VL AC + G + G+ + +M + F M D
Sbjct: 302 VLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTT 361
Query: 560 ----------LGRAGLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
R GL +A + M + PD+ S++ AC +LD G+
Sbjct: 362 IVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHS 421
Query: 607 KLLLIE-PDNSGAYSALCNLYSSCGKWEDA 635
++ N +AL N+Y+ CG E+A
Sbjct: 422 YVIKNGMGSNLPVTNALINMYAKCGSVEEA 451
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 261/701 (37%), Positives = 392/701 (55%), Gaps = 76/701 (10%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFT 147
Y K R D A +VF+ +P+ D++ W T++ A+ FV MV +V P T
Sbjct: 159 YFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG----SEALEAFVRMVDAGRVRPDSTT 214
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ S L + ++ G+ VH + VK GL+ +V L+++Y+K GD
Sbjct: 215 LASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGD------------ 262
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+D A+ FD+M D+V +N++I+GYS NG ++ +F
Sbjct: 263 -------------------MDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKE 303
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
L S +P+ TL + + + L + +HA++++ DA +AL+S
Sbjct: 304 -LTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDA-----DALVS------ 351
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
A TTL Y ++ D+ AR IFD++ ++ + +W AM+ GY
Sbjct: 352 -------------------TALTTL---YCRLNDMESARSIFDAMLEKTMESWNAMISGY 389
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
QNGL + AV LF+ M +PN T+S+ LS + L +L GK +H + ++
Sbjct: 390 AQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNV 449
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V ALI MY+K G+I AR +F+ + + VSW +MI HG G EA++L++ ML+
Sbjct: 450 YVMTALIDMYAKCGSIAEARSIFDRMD-NKNVVSWNAMISGYGLHGQGAEALKLYKDMLD 508
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
I P T++ V+ AC+HGGLV++GQ+ + +M N ++I P H MVDLLGRAG L
Sbjct: 509 ARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLN 568
Query: 568 EAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
EA I P + P V WG+LL AC VHKN DL K+A++KL ++ +N+G Y L N
Sbjct: 569 EALELISEFPQSAIGPGV--WGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSN 626
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LY+S + +AA +R+ K + KT G + ++I ++ HVF D LHPQ +AIY+ + +
Sbjct: 627 LYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLER 686
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ ++ E G+ P T + L+DVEE+ KE M++ HSEKLAIAFGL+ST T +RI+KNLRV
Sbjct: 687 LTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRV 746
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+A KFI K+ R IVVRDA+RFHHF+ G+CSC DYW
Sbjct: 747 CLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 165/350 (47%), Gaps = 65/350 (18%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S Y+K G +D A +F+ M N D V++ +I Y+ G ++++ +F E+ P
Sbjct: 253 LMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPN 312
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
T+ +V+ + G + +H+FVVK L V+ +L +Y ++ D A+++FD
Sbjct: 313 SSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFD 372
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M K + SWN ++S GY+QNG A+ +
Sbjct: 373 AMLEKTMESWNAMIS-------------------------------GYAQNGLTEMAVAL 401
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F ++++ +++P+ T++STLSACA+L L LGK +H I + + + V ALI YA
Sbjct: 402 F-QLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYA 460
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G + A R IFD + +++VV+W AM+
Sbjct: 461 KCGSIAEA---------------------------------RSIFDRMDNKNVVSWNAMI 487
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
GY +G +A++L++ M+ P + T +++ S +D G+++
Sbjct: 488 SGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKV 537
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 78/301 (25%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPF----VGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
PN +L++ + Y +PF + + +HA ++K L + +L Y
Sbjct: 311 PNSSTLVAVIPVY-----------SPFGHELLARCLHAFVVKARLDADALVSTALTTLYC 359
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
+ + A+ +FD M KT+ SW +I
Sbjct: 360 RLNDMESARSIFDAMLEKTM-------------------------------ESWNAMISG 388
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y + G + A+ +F M + V P T++S L++C LG LS GK VH + K L
Sbjct: 389 YAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELN 448
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V V +L++MYAK G A+++FD M KNV SW
Sbjct: 449 VYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSW------------------------- 483
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
N+MI+GY +G EAL ++ +ML D+ + P T S + AC++ + G++
Sbjct: 484 ------NAMISGYGLHGQGAEALKLYKDML-DARILPTSSTFLSVIYACSHGGLVDEGQK 536
Query: 300 I 300
+
Sbjct: 537 V 537
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 55/248 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP ++ S L AHL +L GK VH I K L L+V++ +L++ YAK S
Sbjct: 412 PNPITISSTLSACAHLGALSL-------GKWVHRIISKEKLELNVYVMTALIDMYAKCGS 464
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I+ A+ +FD M K + SWN ++S Y
Sbjct: 465 IAEARSIFDRMDNKNVVSWNAMISGYGLH------------------------------- 493
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-----HSFVVKTGLSG 178
G+ A++++ +M+ ++LPT T SV+ +C+ G + G+KV + + + G+
Sbjct: 494 GQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEH 553
Query: 179 CVNVTNSL-----LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
C + + L LN ++ E A+ G+ W ++ + DLA+
Sbjct: 554 CTCMVDLLGRAGKLNEALELISEFPQSAIGPGV-------WGALLGACMVHKNSDLAKLA 606
Query: 234 FDQMIERD 241
++ E D
Sbjct: 607 SQKLFELD 614
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 30/177 (16%)
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
+ +H ++ +G A+ V++AL +Y K + AR+VF+ + +T+ W +++ L
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVP-SPDTILWNTLLAGLP 191
Query: 491 QHGLGEEAIQLFERMLELG-IKPDHITYVGVLTA-----------CTHGGLVEQGQRYYN 538
G EA++ F RM++ G ++PD T L A C HG V+ G
Sbjct: 192 ----GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCG----- 242
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ ++ H + ++ L + G + A + M PD+VA+ +L+S V+
Sbjct: 243 LAEHEHVV-------TGLMSLYSKCGDMDSAQFLFDRMD-NPDLVAYNALISGYSVN 291
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 252/704 (35%), Positives = 392/704 (55%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ I+ Y K R +LA +VF++MP RD+V W T+I ++ F+++IR+FV+M+ +
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ +VL + L + G + K GL V V L+++Y+K G + +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD Q DQ D++++N+MI+GY+ N A+
Sbjct: 272 FD----------------------------QIDQ---PDLISYNAMISGYTFNHETESAV 300
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F +L S + + TL + L+L + I +
Sbjct: 301 TLFRELLA-SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSL----------------- 342
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
K+G I+ Q +S T L Y ++ ++ AR++FD ++ + +W A
Sbjct: 343 --KIG-------IILQPSVS-------TALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY QNGL A+ LF+ M+ + PN T++++LS + L +L GK +H
Sbjct: 387 MISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ VS AL+ MY+K G+I AR++F+L+ + V+W +MI HG G+EA++LF
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
ML+ GI P +T++ +L AC+H GLV +G ++ M N + +P H+A MVD+LGR
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A FIE MPLEP WG+LL AC +HKN ++ +A+++L ++P+N G Y L
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLL 624
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+YS+ + AA++R+ +K + KT G + ++I ++ +VF D HPQ AI+ +
Sbjct: 625 SNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEML 684
Query: 683 AKIWDEIKEMGFVPDTASV-LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
K+ +++E G+ +T + LHDVE++ KE M+ HSEKLAIAFGLIST T +RI+KN
Sbjct: 685 EKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKN 744
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+A KFI K+ +R IVVRDA RFHHFK G+CSC DYW
Sbjct: 745 LRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 229/497 (46%), Gaps = 70/497 (14%)
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTAL 158
++FN + D + +I +++ G K++I ++ + + L P FT +++ + L
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRL 126
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
D G +H+ + G++ + V ++++++Y K +A+ VFD M ++ W
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLW---- 182
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
N+MI+G+S+N Y +++ +F +ML D L D
Sbjct: 183 ---------------------------NTMISGFSRNSYFEDSIRVFVDML-DVGLSFDS 214
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
TLA+ L+A A L++ +LG I C A G+
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQ--------------------CLASKKGL--------- 245
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+ +V T L+ Y K G R +FD + D++++ AM+ GY N + AV
Sbjct: 246 ----HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVT 301
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
LFR ++ G + N+ TL ++ V L + I +L+ G SVS AL T+Y
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ + AR++F+ + SW +MI Q+GL + AI LF+ M+ + P+ +T
Sbjct: 362 RLNEVQFARQLFDE-SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVT 419
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
+L+AC G + G+ + ++K+ +++ ++VD+ + G + EA + M +
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKS-ERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-V 477
Query: 579 EPDVVAWGSLLSACRVH 595
+ +VV W ++++ +H
Sbjct: 478 DKNVVTWNAMITGYGLH 494
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 199/451 (44%), Gaps = 75/451 (16%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + R F+++ + D+ +N +I G+S NG ++ ++ ++ K ++L+PD FT A
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFA 119
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+SA + LE ++G +HA+ I + VG+A++ Y K E+
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAEL------------- 166
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
AR++FD + +RD V W M+ G+ +N +D++ +F M+
Sbjct: 167 --------------------ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML 206
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
G ++ TL+ +L+ + L G I A + G S + V LI++YSK G
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
R +F+ I + + +S+ +MI + E A+ LF +L G + + T VG++
Sbjct: 267 KGRILFDQID-QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325
Query: 525 THGGLVEQGQRYYNMMKNVHKI-KPTPS-------------HFA---------------- 554
++ + N+ + I +P+ S FA
Sbjct: 326 LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 555 SMVDLLGRAGLLQEAYN-FIENMP-LEPDVVAWGSLLSACRVHKNLDLGK-----IAAEK 607
+M+ + GL A + F E MP L P+ V S+LSAC L +GK I +E+
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
L N +AL ++Y+ CG +A +
Sbjct: 446 L----ESNVYVSTALVDMYAKCGSIVEARQL 472
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 68/276 (24%)
Query: 29 PF----VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
PF + +L+ +K G+ L + +L Y + + +A+++FDE P K+L SWN
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S Y + G D AI +F EM+ Q+ P
Sbjct: 387 MISGYTQNGLTD-------------------------------RAISLFQEMM-PQLSPN 414
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
TVTS+L++C LG LS GK VH + L V V+ +L++MYAK G + A+ +FD
Sbjct: 415 PVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFD 474
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M KNV +W N+MI GY +G+ EAL +
Sbjct: 475 LMVDKNVVTW-------------------------------NAMITGYGLHGHGKEALKL 503
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
F ML+ S + P T S L AC++ + G +I
Sbjct: 504 FYEMLQ-SGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 39/208 (18%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
+PNP ++ S L A L + +GK VH I L +V++ +L++ YAK
Sbjct: 412 SPNPVTVTSILSACAQLGALS-------IGKWVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
SI A+++FD M K + +WN +++ Y
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLH------------------------------ 494
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVN 181
G K A+++F EM+Q + PT T S+L +C+ G +S G ++ HS G
Sbjct: 495 -GHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++++ + G A + M L+
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLE 581
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/638 (36%), Positives = 360/638 (56%), Gaps = 67/638 (10%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
TS+L SC A G L AG+++H ++ +GL ++ L+++YA G
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACG-------------- 111
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++ AR FD M +R+V WN +I Y++ G A+ ++ M
Sbjct: 112 -----------------QVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGM 154
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + ++PD FT L ACA L L+ G+++H +V G
Sbjct: 155 V-EHGVEPDNFTYPLVLKACAALLDLETGREVHQ----------------------RVSG 191
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
Q + +G+ +D Y K G + AR +FD + RD V W +M+ Y
Sbjct: 192 TRWGQDVFVCAGV-----------VDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYG 240
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QNG +A+ L R M G P TL + +S ++ A+L G+++H R G
Sbjct: 241 QNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDK 300
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-E 507
+ +L+ MY+K+G + AR +F + ++E VSW +MI HG +EA+ LF +M +
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHADEALALFNKMKGD 359
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+ PD+IT+VGVL+AC HGG+VE+ + ++ +M N + IKPT H+ ++D+LG G +
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFE 419
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EAY+ I+ M +EPD WG+LL+ C++HKN++LG++A +KL+ +EP+++G Y L N+Y+
Sbjct: 420 EAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYA 479
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
GKWE AA +RK M G+KK SW++++ K H F V D HP+ D IY ++ ++
Sbjct: 480 QSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEG 539
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+ + G+VPD V H+V++D K M+R HSE+LAIAFGLISTP T L + KNLRVC D
Sbjct: 540 LMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCED 599
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH IK I ++V REI++RD R+HHF G CSC+DYW
Sbjct: 600 CHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 138/556 (24%), Positives = 228/556 (41%), Gaps = 120/556 (21%)
Query: 3 TPNPPSL-----ISPLEFYAH--LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLM 55
+P PPS SP ++ H +LQS + S + G+ +H R++ GL L L+
Sbjct: 45 SPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLV 104
Query: 56 NFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTT 115
+ YA + +A+++FD MP R+ W
Sbjct: 105 DLYAACGQVGHARRLFDG-------------------------------MPKRNVFLWNV 133
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+I Y G + A+R++ MV+ V P FT VL +C AL DL G++VH V T
Sbjct: 134 LIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTR 193
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
V V +++MYAK G A+AVFDG+ +++ W
Sbjct: 194 WGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVW--------------------- 232
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
NSMIA Y QNG EAL + +M + + P TL S +SA A+ L
Sbjct: 233 ----------NSMIAAYGQNGRPMEALALCRDMAAN-GIGPTIATLVSAVSAAADAAALP 281
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
G+++H + R F + +L+ YAK G V++
Sbjct: 282 RGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQV------------------------ 317
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYT 414
AR +F+ L R++V+W AM+ GY +G +A+ LF M + P+N T
Sbjct: 318 ---------ARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNIT 368
Query: 415 LSAMLSVSSSLASLDHGKQ-----IHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
+LS + ++ K+ ++A +++ ++ +I + G A +
Sbjct: 369 FVGVLSACNHGGMVEEAKEFFYLMVNAYSIK----PTVQHYTCVIDVLGHTGRFEEAYDL 424
Query: 470 FNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+ ++ W +++ H LGE A+Q +++EL + D YV +
Sbjct: 425 IKGMSIEPDSGIWGALLNGCKIHKNVELGELALQ---KLIELEPE-DAGNYVHLSNIYAQ 480
Query: 527 GGLVEQGQRYYNMMKN 542
G E+ R +M N
Sbjct: 481 SGKWEKAARVRKLMTN 496
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 252/704 (35%), Positives = 392/704 (55%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+ I+ Y K R +LA +VF++MP RD+V W T+I ++ F+++IR+FV+M+ +
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ +VL + L + G + K GL V V L+++Y+K G + +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD Q DQ D++++N+MI+GY+ N A+
Sbjct: 272 FD----------------------------QIDQ---PDLISYNAMISGYTFNHETESAV 300
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F +L S + + TL + L+L + I +
Sbjct: 301 TLFRELLA-SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSL----------------- 342
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
K+G I+ Q +S T L Y ++ ++ AR++FD ++ + +W A
Sbjct: 343 --KIG-------IILQPSVS-------TALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY QNGL A+ LF+ M+ + PN T++++LS + L +L GK +H
Sbjct: 387 MISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ VS AL+ MY+K G+I AR++F+L+ + V+W +MI HG G+EA++LF
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLHGHGKEALKLF 504
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
ML+ GI P +T++ +L AC+H GLV +G ++ M N + +P H+A MVD+LGR
Sbjct: 505 YEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGR 564
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A FIE MPLEP WG+LL AC +HKN ++ +A+++L ++P+N G Y L
Sbjct: 565 AGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLL 624
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+YS+ + AA++R+ +K + KT G + ++I ++ +VF D HPQ AI+ +
Sbjct: 625 SNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEML 684
Query: 683 AKIWDEIKEMGFVPDTASV-LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
K+ +++E G+ +T + LHDVE++ KE M+ HSEKLAIAFGLIST T +RI+KN
Sbjct: 685 EKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKN 744
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+A KFI K+ +R IVVRDA RFHHFK G+CSC DYW
Sbjct: 745 LRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 229/497 (46%), Gaps = 70/497 (14%)
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTAL 158
++FN + D + +I +++ G K++I ++ + + L P FT +++ + L
Sbjct: 67 QLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRL 126
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
D G +H+ + G++ + V ++++++Y K +A+ VFD M ++ W
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLW---- 182
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
N+MI+G+S+N Y +++ +F +ML D L D
Sbjct: 183 ---------------------------NTMISGFSRNSYFEDSIRVFVDML-DVGLSFDS 214
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
TLA+ L+A A L++ +LG I C A G+
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQ--------------------CLASKKGL--------- 245
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+ +V T L+ Y K G R +FD + D++++ AM+ GY N + AV
Sbjct: 246 ----HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVT 301
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
LFR ++ G + N+ TL ++ V L + I +L+ G SVS AL T+Y
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ + AR++F+ + SW +MI Q+GL + AI LF+ M+ + P+ +T
Sbjct: 362 RLNEVQFARQLFDE-SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP-QLSPNPVTVT 419
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
+L+AC G + G+ + ++K+ +++ ++VD+ + G + EA + M +
Sbjct: 420 SILSACAQLGALSIGKWVHGLIKS-ERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-V 477
Query: 579 EPDVVAWGSLLSACRVH 595
+ +VV W ++++ +H
Sbjct: 478 DKNVVTWNAMITGYGLH 494
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 199/451 (44%), Gaps = 75/451 (16%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + R F+++ + D+ +N +I G+S NG ++ ++ ++ K ++L+PD FT A
Sbjct: 60 GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFA 119
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+SA + LE ++G +HA+ I + VG+A++ Y K E+
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAEL------------- 166
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
AR++FD + +RD V W M+ G+ +N +D++ +F M+
Sbjct: 167 --------------------ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML 206
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
G ++ TL+ +L+ + L G I A + G S + V LI++YSK G
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
R +F+ I + + +S+ +MI + E A+ LF +L G + + T VG++
Sbjct: 267 KGRILFDQID-QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325
Query: 525 THGGLVEQGQRYYNMMKNVHKI-KPTPS-------------HFA---------------- 554
++ + N+ + I +P+ S FA
Sbjct: 326 LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 555 SMVDLLGRAGLLQEAYN-FIENMP-LEPDVVAWGSLLSACRVHKNLDLGK-----IAAEK 607
+M+ + GL A + F E MP L P+ V S+LSAC L +GK I +E+
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
L N +AL ++Y+ CG +A +
Sbjct: 446 L----ESNVYVSTALVDMYAKCGSIVEARQL 472
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 68/276 (24%)
Query: 29 PF----VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
PF + +L+ +K G+ L + +L Y + + +A+++FDE P K+L SWN
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S Y + G D AI +F EM+ Q+ P
Sbjct: 387 MISGYTQNGLTD-------------------------------RAISLFQEMM-PQLSPN 414
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
TVTS+L++C LG LS GK VH + L V V+ +L++MYAK G + A+ +FD
Sbjct: 415 PVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFD 474
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M KNV +W N+MI GY +G+ EAL +
Sbjct: 475 LMVDKNVVTW-------------------------------NAMITGYGLHGHGKEALKL 503
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
F ML+ S + P T S L AC++ + G +I
Sbjct: 504 FYEMLQ-SGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 39/208 (18%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
+PNP ++ S L A L + +GK VH I L +V++ +L++ YAK
Sbjct: 412 SPNPVTVTSILSACAQLGALS-------IGKWVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
SI A+++FD M K + +WN +++ Y
Sbjct: 465 SIVEARQLFDLMVDKNVVTWNAMITGYGLH------------------------------ 494
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVN 181
G K A+++F EM+Q + PT T S+L +C+ G +S G ++ HS G
Sbjct: 495 -GHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++++ + G A + M L+
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLE 581
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/713 (35%), Positives = 385/713 (53%), Gaps = 75/713 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G+L +A EVF+ MP R+ VSWT ++V + G + +R+F EM
Sbjct: 43 NNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTS 102
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT+++ L +C G AG ++H V+TG G V NSL+ MY+K
Sbjct: 103 PNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK---------- 150
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
W AR FD + R++ TWNSMI+GY+ G ++L
Sbjct: 151 ---------GRWT------------GDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSL 189
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + +PD+FT AS L AC+ L + G Q+HA + P NA+++
Sbjct: 190 LVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA---VRGVSPASNAILA- 245
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
LLD Y+K + A ++FD L R+ + WT
Sbjct: 246 ---------------------------GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTT 278
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++VG+ Q G K+A+ LFR G + + + LS++++V + A ++ GKQ+H ++
Sbjct: 279 VIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP 338
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+SV+N+L+ MY K G A R F + R VSWT+MI + +HG G EAI LF
Sbjct: 339 AGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN-VVSWTAMINGVGKHGHGREAIDLF 397
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M E G++ D + Y+ +L+AC+H GLV++ +RY++ + +++P H+A MVDLLGR
Sbjct: 398 EEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGR 457
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA I +MP+EP V W +LLSACRVHK++ +G+ + LL ++ DN Y L
Sbjct: 458 AGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVML 517
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNK 681
N+ + G+W + IR +M+ G++K G SW ++ +VH F G D HPQ I
Sbjct: 518 SNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRA 577
Query: 682 MAKIWDEIKE-MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT------ 734
+ ++ ++E +G+ D LHDV+E+ + + LR HSE+LA+ L+
Sbjct: 578 LREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGG 637
Query: 735 --TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCH +K + +V R +VVRDA RFH F+ G CSCRDYW
Sbjct: 638 GEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 690
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 202/490 (41%), Gaps = 103/490 (21%)
Query: 8 SLISPLEFYAHLLQSNLKS--RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
S SP EF L + LK+ G +H ++ G + NSL+ Y+K
Sbjct: 99 SGTSPNEF---TLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTG 155
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A++VFD +P + L +WN+++S YA G+ RDS ++ + E+ R
Sbjct: 156 DARRVFDVIPSRNLATWNSMISGYAHAGQ------------GRDS------LLVFREMQR 197
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VT 183
+ P +FT S+L +C+ LG G +VH+ + G+S N +
Sbjct: 198 RHDE------------QPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 245
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+LL++Y K +A VFDG+ +N W V
Sbjct: 246 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTV-------------------------- 279
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
I G++Q G EA+ +F S ++ D L+S ++ A+ ++ GKQ+H Y
Sbjct: 280 -----IVGHAQEGQVKEAMCLFRRFWS-SGVRADGHVLSSVVAVFADFALVEQGKQVHCY 333
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+T P G L+V +L+D Y+K G G
Sbjct: 334 TAKT------PAG---------------------------LDVSVANSLVDMYLKCGLTG 360
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A R F + R+VV+WTAM+ G ++G ++A++LF M EG + + A+LS S
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACS 420
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSW 482
+D ++ + + + A ++ + +AG + A+ + + W
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480
Query: 483 TSMIVALAQH 492
+++ A H
Sbjct: 481 QTLLSACRVH 490
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 46/303 (15%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
+A L A A L+ G Q+HA +++ F + + N LI YAK G + +A ++ + G
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD--G 64
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+ NV+++T L+ G++ +G ++ + LF
Sbjct: 65 MPERNVVSWTALMVGFL-------------------------------HHGEARECLRLF 93
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M G PN +TLSA L G QIH +R+G V+N+L+ MYSK
Sbjct: 94 GEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKG 151
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVG 519
ARRVF++I R +W SMI A G G +++ +F M +PD T+
Sbjct: 152 RWTGDARRVFDVIPSRN-LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 210
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
+L AC+ G +G + + M V + P + AG L + Y +P+
Sbjct: 211 LLKACSGLGAAREGAQVHAAMA-VRGVSPASNAIL--------AGALLDVYVKCHRLPVA 261
Query: 580 PDV 582
V
Sbjct: 262 MQV 264
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
++ +L S+ +SL G Q+HA+ ++ G S ++N LI MY+K G ++ A VF+ +
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC---------T 525
R VSWT+++V HG E ++LF M G P+ T L AC
Sbjct: 67 ERN-VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQI 125
Query: 526 HGGLVEQG-----------------QRYYNMMKNVHKIKPTP--SHFASMVDLLGRAGLL 566
HG V G R+ + V + P+ + + SM+ AG
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185
Query: 567 QEAYNFIENMPL----EPDVVAWGSLLSAC 592
+++ M +PD + SLL AC
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKAC 215
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 44/245 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH K L V + NSL++ Y K A + F EMP + + SW +++ K
Sbjct: 327 GKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGK 386
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL----- 142
G A ++F M D V++ ++ + G R F + QD+ +
Sbjct: 387 HGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAE 446
Query: 143 ----------------------------PTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
PT ++L++C D++ G++V ++
Sbjct: 447 HYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAV 506
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV-----SSWNVV-VSLHIHSGRLD 228
VN L N+ A+ G+ + + MR K + SW V +H G D
Sbjct: 507 DGDNPVNYV-MLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGD 565
Query: 229 LARAQ 233
A Q
Sbjct: 566 DAHPQ 570
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/650 (37%), Positives = 377/650 (58%), Gaps = 55/650 (8%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT-----------NSLLNMYAKV-GD 195
VT L TA +S K + SFV L NV N++L+ Y KV G
Sbjct: 61 VTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGK 120
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +FD + + S+N+++ ++ S ++ A A F++M +D+ +WN++I+G++QN
Sbjct: 121 VKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQN 180
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +A +F+ M P+K G
Sbjct: 181 GQMQKAFDLFSVM-------PEK---------------------------------NGVS 200
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+A+IS Y + G +E A+++ + G+ +V+ T +L GY+K G + A RIF + +
Sbjct: 201 WSAMISGYVEHGDLEAAEELYKNVGMK--SVVVETAMLTGYMKFGKVELAERIFQRMAVK 258
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
++V W +M+ GY +N +D +++F++M+ +PN +LS++L S+L++L G+Q+H
Sbjct: 259 NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMH 318
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+S + + +LI+MY K G++++A ++F L R++ +SW +MI AQHG G
Sbjct: 319 QLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF-LEMPRKDVISWNAMISGYAQHGAG 377
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A+ LF++M +KPD IT+V V+ AC H G V+ G +Y+ MK I+ P H+
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTC 437
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
++DLLGRAG L EA + I+ MP +P +G+LL ACR+HKNLDL + AA LL ++P +
Sbjct: 438 VIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTS 497
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+ Y L N+Y++ KW+ A +RK MK V K G+SW++I++ H F D LHP+
Sbjct: 498 ATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPEL 557
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+I+ K+ ++ ++K G+VPD LHDVEE+ KE++L HSEKLAIAFGL+ T T
Sbjct: 558 TSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTP 617
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCH AIKFI + REI+VRD TRFHHF+ G CSC DYW
Sbjct: 618 IRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 179/373 (47%), Gaps = 54/373 (14%)
Query: 52 NSLMNFYAKTES-ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N++++ Y K + A ++FD++P S+N +L Y + ++ A FN MP +D
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDI 167
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV--TSVLASCTALGDLSAGKKVH 168
SW T+I + + G+ + A +F V+P + V +++++ GDL A ++++
Sbjct: 168 ASWNTLISGFAQNGQMQKAFDLF------SVMPEKNGVSWSAMISGYVEHGDLEAAEELY 221
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
V G+ V V ++L Y K G +A+ +F M +KN+ +WN
Sbjct: 222 KNV---GMKSVV-VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWN------------- 264
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
SMIAGY +N + L +F M+ +S ++P+ +L+S L C
Sbjct: 265 ------------------SMIAGYVENCRAEDGLKVFKTMI-ESRVRPNPLSLSSVLLGC 305
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
+NL L LG+Q+H + ++ +LIS Y K G ++ A K+ + + +VI+
Sbjct: 306 SNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLE--MPRKDVIS 363
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRD----RDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+ ++ GY + G A +FD +R+ D + + A+++ G V+ F+SM
Sbjct: 364 WNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMK 423
Query: 405 RE---GPKPNNYT 414
+E KP +YT
Sbjct: 424 KEFGIEAKPVHYT 436
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP SL S L L SNL + +G+ +H + K L SL++ Y K
Sbjct: 293 PNPLSLSSVL-----LGCSNLSALP--LGRQMHQLVSKSPLSKDTTACTSLISMYCKCGD 345
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN----RDSVSWTTIIVT 119
+ A K+F EMP K + SWN ++S YA+ G A +F+ M N D +++ +I+
Sbjct: 346 LDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILA 405
Query: 120 YNEIGRFKNAIRMFVEMVQD---QVLPTQFT 147
N G ++ F M ++ + P +T
Sbjct: 406 CNHAGFVDLGVQYFKSMKKEFGIEAKPVHYT 436
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/635 (36%), Positives = 366/635 (57%), Gaps = 65/635 (10%)
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L C G+ H+ +++ GL + +N L+NMY+K
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCS---------------- 92
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+D AR +F++M + +V+WN++I +QN D EAL + M +
Sbjct: 93 ---------------LVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQR 137
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ + ++FT++S L CA + Q+HA+ I+ D+ VG AL+ YA
Sbjct: 138 EGT-PFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYA------ 190
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
K I A ++F+S+ +++ V W++M+ GY QN
Sbjct: 191 ---------------------------KCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 223
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G +++A+ +FR+ G + + +S+ +S + LA+L GKQ+HA + +SG S++ VS
Sbjct: 224 GFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVS 283
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
++LI MY+K G I A VF + + V W +MI A+H EA+ LFE+M + G
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGF 343
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
PD +TYV VL AC+H GL E+GQ+Y+++M H + P+ H++ M+D+LGRAGL+ +AY
Sbjct: 344 FPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAY 403
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+ IE MP WGSLL++C+++ N++ +IAA+ L +EP+N+G + L N+Y++
Sbjct: 404 DLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANK 463
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KW++ A RK ++ V+K +G SW++I+NK+H F V + HPQ D IY K+ + E+K
Sbjct: 464 KWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELK 523
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
++ + DT++ LHDVEE+ K+ +LRHHSEKLAI FGL+ P + +RI+KNLR+C DCH+
Sbjct: 524 KLNYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHT 583
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+K + K REI+VRD RFHHFK G CSC ++W
Sbjct: 584 FMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 207/477 (43%), Gaps = 96/477 (20%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
+LLQ K+R+ G+ HA+II+ GL + + N L+N Y+K + A+K
Sbjct: 48 YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKK------- 100
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
FN MP + VSW T+I + + A+++ ++M
Sbjct: 101 ------------------------FNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQ 136
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++ +FT++SVL +C + ++H+F +K + V +LL++YAK
Sbjct: 137 REGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIK 196
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A +F+ M KN VTW+SM+AGY QNG+
Sbjct: 197 DASQMFESMPEKN-------------------------------AVTWSSMMAGYVQNGF 225
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F N + D F ++S +SACA L L GKQ+HA ++ F + V +
Sbjct: 226 HEEALLIFRNA-QLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSS 284
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI YAK G + A YL + G +++ R +
Sbjct: 285 SLIDMYAKCGCIREA----------YL-------VFQGVLEV---------------RSI 312
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V W AM+ G+ ++ +A+ LF M + G P++ T +L+ S + + G++
Sbjct: 313 VLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDL 372
Query: 438 ALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+R S S+ + +I + +AG ++ A + + + + W S++ + +G
Sbjct: 373 MVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYG 429
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
L +L + + S G+ HA +R G + SN LI MYSK +++AR+ FN +
Sbjct: 46 LHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMP 105
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG-GLVEQG 533
+ VSW ++I AL Q+ EA++L +M G + T VL C ++E
Sbjct: 106 VKS-LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECM 164
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
Q + +K I +++ + + +++A E+MP E + V W S+++
Sbjct: 165 QLHAFSIKAA--IDSNCFVGTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAG 219
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE-MPVKTLCSWNTILSAYA 90
GK VHA K G ++++ +SL++ YAK I A VF + V+++ WN ++S +A
Sbjct: 264 GKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFA 323
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ R A +F M R D V++ ++ + +G + + F MV+ L
Sbjct: 324 RHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSV 383
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD----EMMAKAV 202
S + LG K + + + + ++ SLL G+ E+ AK +
Sbjct: 384 LHYSCMID--ILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYL 441
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLD-LARAQ 233
F+ M N + ++ +++ + + D +ARA+
Sbjct: 442 FE-MEPNNAGNHILLANIYAANKKWDEVARAR 472
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/714 (34%), Positives = 394/714 (55%), Gaps = 73/714 (10%)
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+TL + SAYA+ G LD A EVF+ RD VSW ++ Y + G A +F M
Sbjct: 258 QTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ + + P++ T+ + C++L G+ +H+ ++ GL + + N+LL+MY + G
Sbjct: 318 LHEGIPPSKVTLVNASTGCSSL---RFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSP 374
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A+ +F+G I + V+WN+MIAG SQ G
Sbjct: 375 EEARHLFEG--------------------------------IPGNAVSWNTMIAGSSQKG 402
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKL---GKQIHAYIIRTEFDAT 312
AL +F M + + P + T + L A A N E+ + G+++H+ I+ + +
Sbjct: 403 QMKRALELFQRM-QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASE 461
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+G A++ YA G ++ A ++ ++
Sbjct: 462 PAIGTAVVKMYASCGAIDEAAASFQRG-------------------------------AM 490
Query: 373 RDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
DR DVV+W A++ Q+G K A+ FR M G PN T A+L + A+L G
Sbjct: 491 EDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG 550
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+H SG S++ V+ AL +MY + G++ +AR +F + ++ V + +MI A +Q
Sbjct: 551 VIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQ 610
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
+GL EA++LF RM + G +PD ++V VL+AC+HGGL ++G + M+ + I P+
Sbjct: 611 NGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSED 670
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+A VD+LGRAG L +A I M ++P V+ W +LL ACR ++++D G++A + +
Sbjct: 671 HYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVREL 730
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
+P + AY L N+ + GKW++AA +R M+ G++K G SW++I+++VH F D
Sbjct: 731 DPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRS 790
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
HP+ + IY ++ ++ EI+E+G+VPDT VL V+E KE++L HSE+LAIA G++S+
Sbjct: 791 HPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS 850
Query: 732 ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ T+R+MKNLRVC DCH+A KFI K+V++EIVVRD RFHHF G CSC DYW
Sbjct: 851 TD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 186/741 (25%), Positives = 311/741 (41%), Gaps = 165/741 (22%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
+ P+ S + LL++ R G+ +HARI+ GL L N L+ Y K
Sbjct: 18 DLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKC 75
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
ES+ ++VF + V+ SW TI++A Y
Sbjct: 76 ESLGDVEEVFSRLEVRDEASWTTIITA-------------------------------YT 104
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
E G+ K AI MF M Q+ V T +VL +C LGDLS G+ +H+++V++GL G
Sbjct: 105 EHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSV 164
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ N LL++Y G A +F+ M +++ SWN ++ + SG LD+A F +M
Sbjct: 165 LANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRM---- 219
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+ ++P + TL TLS CA K++ + IH
Sbjct: 220 ----------------------------QLEGVRPARITLVITLSVCA---KIRQARAIH 248
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+ + + + T V AL S YA++G ++
Sbjct: 249 SIVRESGLEQTLVVSTALASAYARLGHLD------------------------------- 277
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
A+ +FD +RDVV+W AML Y Q+G +A LF M+ EG P+ TL ++
Sbjct: 278 --QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNA 332
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S+ +SL G+ IHA AL G + + NAL+ MY++ G+ AR +F I VS
Sbjct: 333 STGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP--GNAVS 390
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT----HGGLVEQGQRYY 537
W +MI +Q G + A++LF+RM G+ P TY+ +L A + +G++ +
Sbjct: 391 WNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLH 450
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP--DVVAWGSLLSACRVH 595
+ + + P+ ++V + G + EA + +E DVV+W +++S+ H
Sbjct: 451 SRIVSC-GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQH 509
Query: 596 ----------KNLDLGKIAAEKLLLIE--------------------------PDNSGAY 619
+ +DL +A ++ + N
Sbjct: 510 GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVA 569
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
+AL ++Y CG E A I F V ++ V +F + Q + +
Sbjct: 570 TALASMYGRCGSLESAREI--------------FEKVAVERDVVIFNAMIAAYSQ-NGLA 614
Query: 680 NKMAKIWDEIKEMGFVPDTAS 700
+ K++ +++ G PD S
Sbjct: 615 GEALKLFWRMQQEGSRPDEQS 635
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/638 (37%), Positives = 365/638 (57%), Gaps = 67/638 (10%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
TSVL SC A L G+++H ++ +GL + L+++YA G
Sbjct: 66 TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACG-------------- 111
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
L H+ RL FD M +R+V WN +I Y+++G A+ ++ M
Sbjct: 112 -----------LVGHARRL------FDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGM 154
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ D ++PD FT L ACA L L+ G+++H ++ T + G + C
Sbjct: 155 V-DYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHW------GEDMFVC------ 201
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
L+D Y K G + AR +FD +R RD V W +M+ Y
Sbjct: 202 ---------------------AGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYG 240
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QNG +A+ L R M G P TL + +S ++ A+L G+++H R G
Sbjct: 241 QNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK 300
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM-LE 507
+ +L+ MY+K+G + AR +F + ++E VSW +MI HG +EA++LF +M +E
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHFDEALKLFNKMRVE 359
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+ PD+IT+VGVL+AC HGG+V++ + ++ +M +V+ IKPT HF +VD+LG AG +
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFE 419
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EAY+ I+ MP++PD WG+LL+ C++HKN++LG++A +KL+ +EP+++G Y L N+Y+
Sbjct: 420 EAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYA 479
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
GKWE AA +RK M G+KK G SW++++ K H F V D HP+ IY ++ ++
Sbjct: 480 QSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEG 539
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+ + G++PDT V HDV +D K M+R HSE+LAIAFGLISTP T L + KNLRVC D
Sbjct: 540 LMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCED 599
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH IK I ++V REI++RD R+HHF G CSC+DYW
Sbjct: 600 CHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 219/533 (41%), Gaps = 107/533 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +LQS + SR+ G+ +H R++ GL L L++ YA + +A+++FD M
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGM- 123
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
P R+ W +I Y G + AI+++
Sbjct: 124 ------------------------------PKRNVFLWNVLIRAYARDGPHEVAIQLYRG 153
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
MV V P FT L +C AL DL G++VH V+ T + V L++MYAK G
Sbjct: 154 MVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGC 213
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+AVFD +R+++ W NSMIA Y QN
Sbjct: 214 VDDARAVFDRIRVRDSVVW-------------------------------NSMIAAYGQN 242
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EAL + +M + + P TL ST+SA A+ L G+++H + R FD +
Sbjct: 243 GRPMEALSLCRDMAAN-GVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKL 301
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+L+ YAK G V++ AR +F+ L R
Sbjct: 302 KTSLVDMYAKSGWVQV---------------------------------ARVLFEQLMKR 328
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
++V+W AM+ GY +G +A++LF M E P+N T +LS + + K+
Sbjct: 329 ELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEF 388
Query: 435 HASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ ++ L+ + AG A + + + ++ W +++ H
Sbjct: 389 FGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHK 448
Query: 494 ---LGEEAIQLFERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
LGE A+Q +++EL +P D YV + G E+ R +M N
Sbjct: 449 NVELGELALQ---KLIEL--EPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTN 496
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 410 PNNYT-LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN+Y +++L + SL G+Q+H L SG ++ L+ +Y+ G + ARR
Sbjct: 59 PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+F+ + ++ W +I A A+ G E AIQL+ M++ G++PD+ TY L AC
Sbjct: 119 LFDGMP-KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALL 177
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+E G+ + + H + A +VD+ + G + +A + + + D V W S+
Sbjct: 178 DLETGREVHERVLGTHWGEDMFV-CAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSM 235
Query: 589 LSA 591
++A
Sbjct: 236 IAA 238
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/650 (37%), Positives = 377/650 (58%), Gaps = 49/650 (7%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C ++ +L K+VH+F+VKTG + D +A + +RL
Sbjct: 22 IKACKSMREL---KQVHAFLVKTG----------------QTHDNAIATEI---LRLSAT 59
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEALGMFANMLK 270
S + + A + FDQ+ ER+ WN++I ++ +AL +F ML
Sbjct: 60 SDFR----------DIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLS 109
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-----TEFDAT---------GPVG 316
+++++P++FT S L ACA + +L GKQ+H +++ EF T G +
Sbjct: 110 EATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSME 169
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
+A + Y V GV+ + +V NV+ ++DGY ++G++ AR +FD + R
Sbjct: 170 DANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRS 229
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK-PNNYTLSAMLSVSSSLASLDHGKQIH 435
VV+W M+ GY QNG K+A+E+F M++ G PN TL ++L S L L+ GK +H
Sbjct: 230 VVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVH 289
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A ++ + +AL+ MY+K G+I A +VF + + ++W ++I LA HG
Sbjct: 290 LYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLP-QNNVITWNAVIGGLAMHGKA 348
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+ RM + GI P +TY+ +L+AC+H GLV++G+ ++N M N +KP H+
Sbjct: 349 NDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGC 408
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
MVDLLGRAG L+EA I NMP++PD V W +LL A ++HKN+ +G AAE L+ + P +
Sbjct: 409 MVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHD 468
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
SGAY AL N+Y+S G W+ A +R MK + ++K G SW++I +H F VED H +
Sbjct: 469 SGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRA 528
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
I++ + +I +++ G +PDT VL ++E KE +L +HSEK+A+AFGLISTP T
Sbjct: 529 KDIHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTP 588
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L I+KNLR+C DCHS++K I K+ +R+IV+RD RFHHF+ G CSC DYW
Sbjct: 589 LCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 202/442 (45%), Gaps = 55/442 (12%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI-GRFKNAIRMFVEMVQD-QVLP 143
LSA + + A VF+ +P R+ +W T+I E R +A+ +F +M+ + V P
Sbjct: 56 LSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEP 115
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
QFT SVL +C + L+ GK+VH ++K GL V +LL MY G A +F
Sbjct: 116 NQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLF 175
Query: 204 ----DGM------------RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+G+ R NV NV+V + G L AR FD+M +R VV+WN
Sbjct: 176 YRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNV 235
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
MI+GY+QNG+ EA+ +F M++ + P++ TL S L A + L L+LGK +H Y +
Sbjct: 236 MISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKN 295
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ +G+AL+ YAK G +E A +
Sbjct: 296 KIRIDDVLGSALVDMYAKCGSIE---------------------------------KAIQ 322
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F+ L +V+ W A++ G +G D M + G P++ T A+LS S
Sbjct: 323 VFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGL 382
Query: 428 LDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+D G+ + S G + ++ + +AG + A + + + + V W +++
Sbjct: 383 VDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALL 442
Query: 487 VALAQH---GLGEEAIQLFERM 505
A H +G A ++ +M
Sbjct: 443 GASKMHKNIKIGMRAAEVLMQM 464
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 43 GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVF 102
G +V L N +++ YA+ ++ A+++FD M +++ SWN ++S YA+
Sbjct: 194 GREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQN---------- 243
Query: 103 NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDL 161
G +K AI +F M+Q VLP + T+ SVL + + LG L
Sbjct: 244 ---------------------GFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVL 282
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV-SL 220
GK VH + K + + ++L++MYAK G A VF+ + NV +WN V+ L
Sbjct: 283 ELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGL 342
Query: 221 HIHSGRLD----LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+H D L+R + + D VT+ ++++ S G E F +M+ LKP
Sbjct: 343 AMHGKANDIFNYLSRMEKCGISPSD-VTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKP 401
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L+S L + L L GK VH K + + L ++L++ YAK S
Sbjct: 264 PNRVTLVSVLPAISRLGVLEL-------GKWVHLYAEKNKIRIDDVLGSALVDMYAKCGS 316
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
I A +VF+ +P + +WN ++ A G+ A ++FN + + + VTY
Sbjct: 317 IEKAIQVFERLPQNNVITWNAVIGGLAMHGK---ANDIFNYLSRMEKCGISPSDVTY 370
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/758 (33%), Positives = 411/758 (54%), Gaps = 67/758 (8%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G +HA +IK G F+ N+LM Y K + ++FDEMP + + SWNT++S+
Sbjct: 189 LGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVV 248
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K+ + A E+F M R + R+ FT+++
Sbjct: 249 KEMMYERAFELFRDM-------------------RRIDGFRI-----------DHFTLST 278
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L + L + G+++H+ V+K G ++V N+L+ Y K G A+F+ MR+++
Sbjct: 279 ILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRD 337
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +W +++ ++ G DLA FD+M R+ +++N++++G+ QNG +AL F M++
Sbjct: 338 VITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVE 397
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ D FTL L+AC L + K+ KQIH +I++ F + + AL+ + G +
Sbjct: 398 EGVELTD-FTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMA 456
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
AQK+ Q S I WT+M+ GY +N
Sbjct: 457 DAQKMFSQGSFSQSGSI-------------------------------IWTSMICGYARN 485
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLS-AMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
++A+ LF EG + S A+L V +LA + GKQIH AL+SG S L V
Sbjct: 486 AQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGV 545
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N++ITMYSK N++ A +VFN++ + VSW +I H G+EA+ ++ +M + G
Sbjct: 546 GNSIITMYSKCSNMDDAIKVFNVMP-AHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAG 604
Query: 510 IKPDHITYVGVLTACTH--GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
IKPD +T+V +++A H LV+ +R + MK ++ I PT H+ S+V +LG GLL+
Sbjct: 605 IKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLE 664
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I MP+EP+ W +LL ACR+H N +GK AA+ LL ++P + Y + NLYS
Sbjct: 665 EAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYS 724
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G+W + +R+ M+ G +K G SW+ +NKVH F D HPQ I++ + +
Sbjct: 725 AYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIM 784
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E + G+VPDT+ VLH+VEE K+ L +HS K+A +GL+ T +RI+KN+ +C D
Sbjct: 785 ECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGD 844
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ +K++ + REI +RDA+ H F G CSC+DYW
Sbjct: 845 CHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 248/526 (47%), Gaps = 52/526 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ AY K G + A +VF + + VS+T +I + + R + A+ +F M +
Sbjct: 109 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 168
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+F+ ++L C L DL G ++H+ V+K G V+N+L+ +Y K G +
Sbjct: 169 LNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQL 228
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M ++++SWN V+S + + M ER A
Sbjct: 229 FDEMPHRDIASWNTVISSVVK-----------EMMYER--------------------AF 257
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F +M + + D FTL++ L A L + +G++IHA++I+ F++ V NALI
Sbjct: 258 ELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRF 316
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G ++ + E+ + +VI +T ++ Y++ G A +FD + R+ +++ A
Sbjct: 317 YTKCGSIKHVVALFEKMRVR--DVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNA 374
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+L G+ QNG A+ F MV EG + ++TL+ +L+ L KQIH L+ G
Sbjct: 375 ILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG 434
Query: 443 EASSLSVSNALITMYSKAGNI-NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S+ + AL+ M ++ G + +A + + ++ WTSMI A++ EEAI L
Sbjct: 435 FGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISL 494
Query: 502 F-ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA------ 554
F + LE + D + VL C E G++ + H +K S F
Sbjct: 495 FCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIH-----CHALK---SGFLSDLGVG 546
Query: 555 -SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
S++ + + + +A MP D+V+W L++ +H+ D
Sbjct: 547 NSIITMYSKCSNMDDAIKVFNVMPAH-DIVSWNGLIAGHLLHRQGD 591
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y+K+G + A ++F L +VV++TAM+ G+ ++ + A+E+F M G + N
Sbjct: 111 LIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELN 170
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
++ A+L+V L L+ G Q+HA ++ G + VSNAL+ +Y K G +++ ++F+
Sbjct: 171 EFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFD 230
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVGVLTACTHGGLV 530
+ R + SW ++I ++ + + E A +LF M + G + DH T +L A GL
Sbjct: 231 EMPHR-DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAAR--GLA 287
Query: 531 EQGQRYYNMMKNVHKI--KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
R + +V KI + S +++ + G ++ E M + DV+ W +
Sbjct: 288 SMVGR--EIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVR-DVITWTEM 344
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
++A + L +A E + NS +Y+A+ + + G+ A M GV+
Sbjct: 345 ITA---YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVE 401
Query: 649 KT 650
T
Sbjct: 402 LT 403
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 346/569 (60%), Gaps = 4/569 (0%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
V S+ + A+ F + +V WN+ + +++ +A+ +F L++ + P
Sbjct: 53 VASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYR-LREFDISP 111
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D +T + L AC+ L ++ GK +H Y+ + + + N ++ YA G + +A+K+
Sbjct: 112 DHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVF 171
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++ + +VI + ++ +K+GD A ++F + +R+V +WT+M+ GY Q G +K+A
Sbjct: 172 DK--MPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEA 229
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++LF M G PN T+ A+L + + +L G++IH + RSG ++ V N LI M
Sbjct: 230 IDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDM 289
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y K G + A R+F+ + R VSW++MI LA HG E+A+ LF +M+ G+KP+ +T
Sbjct: 290 YVKCGCLEDACRIFDNMEERT-VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVT 348
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
++G+L AC+H G+VE+G++Y+ M + I P H+ MVDL RAGLLQEA+ FI NM
Sbjct: 349 FIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNM 408
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P+ P+ V WG+LL C+VHKN+ L + A L ++P N G Y L N+Y+ G+WED A
Sbjct: 409 PIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVA 468
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
+RK M+ GVKKT G+S + ++ V+ F D HPQ + I+ K+ +K G+VP
Sbjct: 469 RVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVP 528
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
+T+ VL D+EED KE+ L HSEKLA+ FGLI T T +RIMKNLRVC DCH+A+K I
Sbjct: 529 NTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIIS 588
Query: 757 KLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ REIVVRD RFH FK G CSC DYW
Sbjct: 589 VVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 241/509 (47%), Gaps = 60/509 (11%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
V ++C++N+ S YAK +F L+ + W T + ++ E +AI +F
Sbjct: 53 VASVCAFNSSFS-YAKL--------IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYR 103
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ + + P +T + VL +C+ L D+ GK VH +V K GL + + N ++++YA G+
Sbjct: 104 LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGE 163
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A+ VFD M ++V +WN++++ + G + A F +M ER+V +W SMI GY+Q
Sbjct: 164 IGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQC 223
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G EA+ +F M +D+ L P++ T+ + L ACA++ L LG++IH + R+ ++ V
Sbjct: 224 GKSKEAIDLFLEM-EDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRV 282
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N LI Y K G +E A RIFD++ +R
Sbjct: 283 CNTLIDMYVKCGCLE---------------------------------DACRIFDNMEER 309
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
VV+W+AM+ G +G +DA+ LF M+ G KPN T +L S + ++ G++
Sbjct: 310 TVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYF 369
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH-- 492
AS R G + ++ ++S+AG + A + V W +++ H
Sbjct: 370 ASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKN 429
Query: 493 -GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
L EEA + ++ L + YV + G E R +M++ +K TP
Sbjct: 430 IKLAEEATRHLSKLDPL----NDGYYVVLSNIYAEAGRWEDVARVRKLMRD-RGVKKTPG 484
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEP 580
+ MV+ + YNF+ P
Sbjct: 485 WSSIMVEGV--------VYNFVAGDDTHP 505
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 185/362 (51%), Gaps = 11/362 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK+VH + K GL ++FL+N +++ YA I A+KVFD+MP + + +WN +++ K
Sbjct: 132 GKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVK 191
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A ++F MP R+ SWT++I Y + G+ K AI +F+EM +LP + TV +V
Sbjct: 192 MGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAV 251
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C +G+L G+++H F ++G + V N+L++MY K G A +FD M + V
Sbjct: 252 LVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTV 311
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
SW+ +++ GR + A A F++MI V VT+ ++ S G + FA+
Sbjct: 312 VSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFAS 371
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D + P + + L ++ H +I+ G V AL+
Sbjct: 372 MTRDYGIVPRIEHYGCMVDL---FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHK 428
Query: 328 GVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV---VAWTAM 383
+++A++ S + LN + L + Y + G R+ +RDR V W+++
Sbjct: 429 NIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSI 488
Query: 384 LV 385
+V
Sbjct: 489 MV 490
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/638 (37%), Positives = 353/638 (55%), Gaps = 67/638 (10%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ S+L +C GD+S G+ VH VK + N+LL+MYAK G V DG
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCG-------VLDGAI 53
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
L FD M R VVTW S+IA Y++ G EA+ +F
Sbjct: 54 L------------------------VFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHE 89
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M ++ + PD FT+ + L ACA L+ GK +H YI + +
Sbjct: 90 MDREG-VSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQS---------------- 132
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
N+ L+D Y K G + A +F + +D+++W M+ GY
Sbjct: 133 -----------------NIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGY 175
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+N L +A+ LF MV E KP+ TL+ +L +SLASLD GK++H LR+G S
Sbjct: 176 SKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ 234
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V+NAL+ MY K G AR +F++I ++ ++WT MI HG G AI F M +
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIP-TKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ 293
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI+PD ++++ +L AC+H GL+++G R++N+M++ +KP H+A +VDLL R+G L
Sbjct: 294 AGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLA 353
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
AY FI++MP+EPD WG+LLS CR+H ++ L + AE + +EP+N+G Y L N Y+
Sbjct: 354 MAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYA 413
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
KWE+ +R+ + G+KK G SW+++++KVH+F + HPQ I + ++
Sbjct: 414 EAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRS 473
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++KE G+ P T L + + KE L HSEKLA+AFG+++ P T+R+ KNLRVC D
Sbjct: 474 KMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGD 533
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH KFI K + REIV+RD+ RFHHFK G+C CR +W
Sbjct: 534 CHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 206/445 (46%), Gaps = 71/445 (15%)
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
T C NT+L YAK G LD A VF+LM R V+WT++I Y G AIR+F EM
Sbjct: 34 TFC--NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMD 91
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++ V P FT+T+VL +C G L GK VH+++ + + + V N+L++MYAK G
Sbjct: 92 REGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSME 151
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A +VF M +K++ S WN+MI GYS+N
Sbjct: 152 DANSVFLEMPVKDIIS-------------------------------WNTMIGGYSKNSL 180
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F +M+ + +KPD TLA L ACA+L L GK++H +I+R F + V N
Sbjct: 181 PNEALSLFGDMVLE--MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN 238
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
AL+ D Y+K G AR +FD + +D+
Sbjct: 239 ALV---------------------------------DMYVKCGVPVLARLLFDMIPTKDL 265
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHA 436
+ WT M+ GY +G +A+ F M + G +P+ + ++L S LD G + +
Sbjct: 266 ITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNV 325
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
L ++ + +++G + A + + + W +++ H +
Sbjct: 326 MQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVK 385
Query: 497 EAIQLFERMLELGIKPDHITYVGVL 521
A ++ E + EL +P++ Y +L
Sbjct: 386 LAEKVAEHVFEL--EPENTGYYVLL 408
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 39/311 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH I + + ++F+ N+LM+ YAK S+ A VF EMPVK + SWNT++ Y+K
Sbjct: 118 GKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 177
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
N +PN A+ +F +MV ++ P T+ +
Sbjct: 178 -----------NSLPNE--------------------ALSLFGDMVL-EMKPDGTTLACI 205
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C +L L GK+VH +++ G V N+L++MY K G ++A+ +FD + K++
Sbjct: 206 LPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDL 265
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+W V+++ + G + A F++M IE D V++ S++ S +G E F
Sbjct: 266 ITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNV 325
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + ++KP A + A KL + + +I + + AL+S
Sbjct: 326 MQDECNVKPKLEHYACIVDLLARSGKLAMA---YKFIKSMPIEPDATIWGALLSGCRIHH 382
Query: 328 GVEIAQKIVEQ 338
V++A+K+ E
Sbjct: 383 DVKLAEKVAEH 393
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/730 (35%), Positives = 393/730 (53%), Gaps = 71/730 (9%)
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN--RDSVSWTT 115
+ K + + A+ VF+++P + + +L AYA L A +FN +P+ +D++SW +
Sbjct: 67 HLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNS 126
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
+I F A+++F EM Q +S +H F+
Sbjct: 127 VIKASIICNDFVTAVKLFDEMPQRN-------------------SISWTTIIHGFLS--- 164
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
+G VN N V K+V++WN +V+ + ++GR++ A F
Sbjct: 165 -TGRVNEAERFFNAMPYVD--------------KDVATWNAMVNGYCNNGRVNDALRLFC 209
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
QM RDV++W S+I G +NG ++AL F NM+ S + TL LSA A +
Sbjct: 210 QMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFY 269
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
G QIH C K G + V S +++
Sbjct: 270 AGIQIHC-------------------CMFKFGFCCGLDEFVSASLVTF------------ 298
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y +G A ++F ++VV WTA+L G N + +A+E+F M+R PN +
Sbjct: 299 YASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSF 358
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
++ L+ L L+ G+ IHA+ ++ G +++ N+L+ MYSK G I A VF I
Sbjct: 359 TSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGI-C 417
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ VSW S+IV AQHG G A+ LF+ ML G++ D IT G+L+AC+ G++++ +
Sbjct: 418 EKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARC 477
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++ +K T H+A MVD+LGR G ++EA +MP+E + + W LLSACRVH
Sbjct: 478 FFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVH 537
Query: 596 KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
+LD+ + AA+++ +EPD S AY L NLY+S +W + A IR MK+ G+ K G SW
Sbjct: 538 SSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSW 597
Query: 656 VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR 715
+ ++ H F D HP + IY K+ + +++E+G++PD LHDVE + E+ML
Sbjct: 598 ITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLS 657
Query: 716 HHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFK 775
+HSE+LAIAFGL+ST E +T+ IMKNLRVC DCH+AI + K+V+REIVVRD++RFHHFK
Sbjct: 658 YHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFK 717
Query: 776 KGLCSCRDYW 785
G+CSC DYW
Sbjct: 718 NGICSCGDYW 727
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 212/466 (45%), Gaps = 71/466 (15%)
Query: 53 SLMNFYAKTESISYAKKVFDEMPV--KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
++++ + T ++ A++ F+ MP K + +WN +++ Y GR++ A +F MP+RD
Sbjct: 157 TIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDV 216
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
+SWT+IIV + G+ A+ F MV V + T+ L++ + D AG ++H
Sbjct: 217 ISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHC 276
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
+ K G C + DE ++ + +V+ + R+
Sbjct: 277 CMFKFGF--CCGL------------DEFVSAS---------------LVTFYASCKRMGD 307
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
A F + + ++VV W +++ G N EAL +F+ M++ ++ P++ + S L++C
Sbjct: 308 ACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMR-FNVVPNESSFTSALNSCV 366
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
LE L+ G+ IHA I+ + GN+L+ Y+K G
Sbjct: 367 GLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGF--------------------- 405
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
IG A +F + +++VV+W +++VG Q+G A+ LF+ M+REG +
Sbjct: 406 ------------IGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVE 453
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINAAR 467
+ TL+ +LS S L + R + L+V + ++ + + G + A
Sbjct: 454 SDEITLTGLLSACSRSGMLQKARCFFGYFARK-RSMKLTVEHYACMVDVLGRCGEVEEAE 512
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ + ++ W ++ A H + A + +R+ E+ +PD
Sbjct: 513 ALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEM--EPD 556
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 173/388 (44%), Gaps = 15/388 (3%)
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+S N H+ + +LD ARA F+++ V + ++ Y+ N EA+ +F + +
Sbjct: 58 TSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSN 117
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG-NALISCYAKVGGVE 330
+ D + S + A + + A + E + +I + G V
Sbjct: 118 TK---DTISWNSVIKA-----SIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVN 169
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A++ +V + +++GY G + A R+F + RDV++WT+++VG ++N
Sbjct: 170 EAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRN 229
Query: 391 GLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS- 448
G + A+ F++MV G ++ TL LS ++ + G QIH + G L
Sbjct: 230 GKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDE 289
Query: 449 -VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
VS +L+T Y+ + A +VF + V WT+++ + EA+++F M+
Sbjct: 290 FVSASLVTFYASCKRMGDACKVFGETVCKN-VVVWTALLTGCGLNDKHVEALEVFSEMMR 348
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+ P+ ++ L +C +E+G R + ++ S+V + + G +
Sbjct: 349 FNVVPNESSFTSALNSCVGLEDLEKG-RVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIG 407
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVH 595
+A + + E +VV+W S++ C H
Sbjct: 408 DALCVFKGI-CEKNVVSWNSVIVGCAQH 434
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 114/279 (40%), Gaps = 65/279 (23%)
Query: 30 FVGKLVHARIIKCGL--HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+ G +H + K G L F+ SL+ FYA + + A KVF E K + W +L+
Sbjct: 269 YAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLT 328
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+ A EVF+ EM++ V+P + +
Sbjct: 329 GCGLNDKHVEALEVFS-------------------------------EMMRFNVVPNESS 357
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
TS L SC L DL G+ +H+ +K GL V NSL+ MY+K G A VF G+
Sbjct: 358 FTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGIC 417
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
KNV SW NS+I G +Q+G AL +F
Sbjct: 418 EKNVVSW-------------------------------NSVIVGCAQHGCGTWALVLFKE 446
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
ML++ ++ D+ TL LSAC+ L+ + Y R
Sbjct: 447 MLRE-GVESDEITLTGLLSACSRSGMLQKARCFFGYFAR 484
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+++HA IK GL +V+ NSL+ Y+K I A VF + K + SWN+++ A+
Sbjct: 374 GRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQ 433
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +W A+ +F EM+++ V + T+T +
Sbjct: 434 HG----------------CGTW---------------ALVLFKEMLREGVESDEITLTGL 462
Query: 152 LASCTALGDLSAGKKVHS-FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L++C+ G L + F K + V ++++ + G+ A+A+ M ++
Sbjct: 463 LSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEA 522
Query: 210 NVSSWNVVVS-LHIHSGRLDLARAQFDQMIERD 241
N W V++S +HS LD+A ++ E +
Sbjct: 523 NSMVWLVLLSACRVHSS-LDVAERAAKRIFEME 554
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/640 (36%), Positives = 358/640 (55%), Gaps = 66/640 (10%)
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT+ +L C L GK H + GL N L+N+Y K G
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQN--------- 107
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
D AR FD M R +++WN+MIAGY+ N D EAL +F
Sbjct: 108 ----------------------DCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLF 145
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+ M ++ + + +FTL+STL ACA + KQ+H I+ D++ VG
Sbjct: 146 SRMHREGT-QMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVG--------- 195
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
T LD Y K I A +F+++ ++ V W+++
Sbjct: 196 ------------------------TAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFA 231
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
G+ QNGL+++ + LF+S REG + +T+S++LS +SLA + G Q+HA ++ G
Sbjct: 232 GFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHR 291
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+L V+ +L+ +Y+K G I + VF + + V W +MI + ++H EA+ LFE+M
Sbjct: 292 NLFVATSLVDVYAKCGQIEKSYEVFADME-EKNVVLWNAMIASFSRHAHSWEAMILFEKM 350
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
++GI P+ +TY+ +L+AC+H GLVE+G+ Y+N++ + +P H++ MVD+LGR+G
Sbjct: 351 QQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGK 410
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
EA+ ++ MP EP WGSLL + R+HKN+ L +IAAE+L +EP+N G + L N+
Sbjct: 411 TDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNV 470
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y++ G WE+ RK ++ G KK G SW++ + K+HVF + HP +YNK+ +I
Sbjct: 471 YAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEI 530
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
+ E++++ +T LHDV D KE++L+HHSEKLA AFGLIS P N + I KNLR+C
Sbjct: 531 YHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRIC 590
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHS +K + + +R+++VRD RFHHFK G CSC D+W
Sbjct: 591 GDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 201/470 (42%), Gaps = 99/470 (21%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LLQ K R+ VGK H I GL N L+N Y K A++VFD M V++
Sbjct: 62 LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRS 121
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ SWNT+++ Y NR+ V A+++F M +
Sbjct: 122 IISWNTMIAGYTH---------------NREDV----------------EALKLFSRMHR 150
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ T+FT++S L +C A + K++H+ +K L V + L++YAK M+
Sbjct: 151 EGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCN--MI 208
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A + F+ M E+ VTW+S+ AG+ QNG
Sbjct: 209 KDACW-----------------------------VFENMPEKTSVTWSSLFAGFVQNGLH 239
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E L +F + ++ ++ +FT++S LS CA+L + G Q+HA I++ F V +
Sbjct: 240 EEVLCLFQSTQRE-GMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATS 298
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+ YAK G +E + +F + +++VV
Sbjct: 299 LVDVYAKCGQIE---------------------------------KSYEVFADMEEKNVV 325
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W AM+ + ++ + +A+ LF M + G PN T ++LS S ++ G+
Sbjct: 326 LWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLL 385
Query: 439 L--RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
L R+ E + L S ++ + ++G + A ++ + + + W S++
Sbjct: 386 LSDRTAEPNVLHYS-CMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 147/332 (44%), Gaps = 36/332 (10%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D FTL L CA L +GK H I N LI+ Y K G + A+++
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV- 113
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
FD++ R +++W M+ GY N + +A
Sbjct: 114 --------------------------------FDAMSVRSIISWNTMIAGYTHNREDVEA 141
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
++LF M REG + +TLS+ L ++ ++ KQ+H A++ SS V A + +
Sbjct: 142 LKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDV 201
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y+K I A VF + + +V+W+S+ Q+GL EE + LF+ G++ T
Sbjct: 202 YAKCNMIKDACWVFENMP-EKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFT 260
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+L+ C L+ +G + + ++ H S+VD+ + G ++++Y +M
Sbjct: 261 VSSILSTCASLALIIEGTQVHAVIVK-HGFHRNLFVATSLVDVYAKCGQIEKSYEVFADM 319
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
E +VV W +++++ H + I EK+
Sbjct: 320 E-EKNVVLWNAMIASFSRHAHSWEAMILFEKM 350
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VHA I+K G H ++F+ SL++ YAK I + +VF +M K + WN +++++++
Sbjct: 277 GTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSR 336
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
SW +I +F +M Q + P + T S+
Sbjct: 337 HAH-----------------SWEAMI--------------LFEKMQQVGIFPNEVTYLSI 365
Query: 152 LASCTALGDLSAGKKVHSFVV--KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
L++C+ G + G+ + ++ +T ++ + ++++ + G A + D M +
Sbjct: 366 LSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYS-CMVDVLGRSGKTDEAWKLLDKMPFE 424
Query: 210 NVSS-WNVVV-SLHIHSGRLDLARAQFDQMI 238
+S W ++ S IH + LAR +Q+
Sbjct: 425 PTASMWGSLLGSSRIHKN-IRLARIAAEQLF 454
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/561 (41%), Positives = 340/561 (60%), Gaps = 8/561 (1%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
GRLD + A F + V W ++I G++ G +AL +A ML ++P+ FT +S
Sbjct: 76 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLT-QGVEPNAFTFSSI 134
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C ++ GK +H+ ++ FD+ V L+ YA+ G V AQ++ + +
Sbjct: 135 LKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDT--MPEK 188
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
++++ T +L Y K G++ AR +FD + +RD V W M+ GY QNG+ +A+ LFR M+
Sbjct: 189 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML 248
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+ KPN T+ ++LS L +L+ G+ +H+ +G ++ V AL+ MYSK G++
Sbjct: 249 KAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLE 308
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AR VF+ I ++ V+W SMIV A HG +EA+QLF+ M +G+ P +IT++G+L+AC
Sbjct: 309 DARLVFDKID-DKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 367
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
H G V +G +N MK+ + I+P H+ MV+LLGRAG +++AY ++NM +EPD V
Sbjct: 368 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 427
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
WG+LL ACR+H + LG+ E L+ NSG Y L N+Y++ G W+ A +R MK
Sbjct: 428 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 487
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
GVKK G S +++ NKVH F HP+R IY + +I +K G+ P T VLHD
Sbjct: 488 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 547
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+ E KE+ L HSEKLAIAFGLI+T TT++I+KNLRVC DCH K I K+ R+IV
Sbjct: 548 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 607
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
VRD RFHHF G CSC DYW
Sbjct: 608 VRDRNRFHHFVNGSCSCGDYW 628
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 205/419 (48%), Gaps = 42/419 (10%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+YA GRLD + +F N WT II + G + A+ + +M+ V P FT
Sbjct: 71 SYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT 130
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S+L C + GK +HS VK G + V LL++YA+ GD + A+ +FD M
Sbjct: 131 FSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 186
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K++ S +++ + G LD AR FD M ERD V WN MI GY+QNG EAL +F
Sbjct: 187 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 246
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
MLK + KP++ T+ S LSAC L L+ G+ +H+YI VG AL+ Y+K G
Sbjct: 247 MLK-AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 305
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E AR +FD + D+DVVAW +M+VGY
Sbjct: 306 SLE---------------------------------DARLVFDKIDDKDVVAWNSMIVGY 332
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRSGEASS 446
+G +++A++LF+SM R G P N T +LS + G I + G
Sbjct: 333 AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 392
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLF 502
+ ++ + +AG++ A + ++ + V W +++ A HG LGE+ ++L
Sbjct: 393 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL 451
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 200/414 (48%), Gaps = 59/414 (14%)
Query: 13 LEFYAHLLQSNLKSRNPFV------------GKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
L FYA +L ++ N F GK +H++ +K G ++++ L++ YA+
Sbjct: 113 LNFYAQMLTQGVEP-NAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYAR 171
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ A+++FD MP K+L S +L+ YAK G LD A +F+ M RD V W +I Y
Sbjct: 172 GGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGY 231
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+ G A+ +F M++ + P + TV SVL++C LG L +G+ VHS++ G+ V
Sbjct: 232 TQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNV 291
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+V +L++MY+K G A+ VFD ++ ++
Sbjct: 292 HVGTALVDMYSKCGSLEDARLVFD-------------------------------KIDDK 320
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG--- 297
DVV WNSMI GY+ +G+ EAL +F +M + L P T LSAC + + G
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCR-MGLHPTNITFIGILSACGHSGWVTEGWDI 379
Query: 298 --KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
K Y I + + G + N L + G VE A ++V+ I + + + TLL
Sbjct: 380 FNKMKDEYGIEPKIEHYGCMVNLL----GRAGHVEQAYELVKNMNIEP-DPVLWGTLLGA 434
Query: 356 YIKIGDIGPARRIFDSLRDRDVV-AWTAMLVG--YEQNGLNKDAVELFRSMVRE 406
G I +I + L D+++ + T +L+ Y G N D V R+M+++
Sbjct: 435 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG-NWDGVARLRTMMKD 487
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 146/292 (50%), Gaps = 39/292 (13%)
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
++ + G+ + ++ F L Y +G + + +F ++ V WTA++ G+ GL++
Sbjct: 52 VLFRHGLDHHPILNFK-LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHE 110
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS---- 450
A+ + M+ +G +PN +T S++L L ++ GK +H+ A++ G S L V
Sbjct: 111 QALNFYAQMLTQGVEPNAFTFSSIL----KLCPIEPGKALHSQAVKLGFDSDLYVRTGLL 166
Query: 451 ---------------------------NALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
A++T Y+K G ++AAR +F+ + R + V W
Sbjct: 167 DVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEER-DGVCWN 225
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
MI Q+G+ EA+ LF RML+ KP+ +T + VL+AC G +E G+ ++ ++N
Sbjct: 226 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN- 284
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ I+ ++VD+ + G L++A + + + DVVAW S++ +H
Sbjct: 285 NGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID-DKDVVAWNSMIVGYAMH 335
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/703 (36%), Positives = 390/703 (55%), Gaps = 69/703 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K GRL LA ++F+ MP+R++VS ++ Y GR +A+ + D L
Sbjct: 49 NHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALALL--KAADFSL 106
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
++ +++ L++ + G++ H + VK+GL V N++L+MY + A V
Sbjct: 107 -NEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKV 165
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ NVS + D+ +NSMI G+ G +F+
Sbjct: 166 FE-----NVSGF--------------------------DIFAFNSMINGFLDLG-EFDGS 193
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ + D + + L CA+ ++L LG Q+HA ++ + VG+AL+
Sbjct: 194 IRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDM 253
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K A F+ L +++VV+WTA
Sbjct: 254 YGKCDCAR---------------------------------DAHSAFEVLPEKNVVSWTA 280
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ Y QN +DA++LF + EG +PN +T + L+ + LA+L +G + ASA+++G
Sbjct: 281 VMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTG 340
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+LSV NAL+ MYSK+G+I+ A RVF + WR + VSW S+I+ A HGL EA+ +F
Sbjct: 341 HWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWR-DVVSWNSVIIGYAHHGLAREAMCVF 399
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
ML I P ++T+VGVL AC GLV++G Y N+M IKP H+ MV LL R
Sbjct: 400 HDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCR 459
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L EA FI + + DVVAW SLLS+C+V+KN LG AE++L ++P++ G Y L
Sbjct: 460 AGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLL 519
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ +W+ +RK M+ GV+K G SW+Q+ ++VHVF ED H + I K+
Sbjct: 520 SNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKL 579
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ +IK +G+VP+ A VLHDVE + KE+ L +HSEK+A+AFGLI +PE T+RIMKNL
Sbjct: 580 KELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNL 639
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+C+DCH AIK I + R+IVVRD RFH G+CSC DYW
Sbjct: 640 RICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 192/395 (48%), Gaps = 48/395 (12%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+M+ A FD V N +++ + GRL LAR FD M R+ V+ N +++GY+
Sbjct: 36 QMIRAAHFD------VIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASA 89
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +AL +LK + +++ L++ LSA A++ +G+Q H Y +++ V
Sbjct: 90 GRHSDALA----LLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NA++ Y + VE A K+ E +S ++ AF ++++G++ +G+ FD
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFEN--VSGFDIFAFNSMINGFLDLGE-------FDG---- 192
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
++ + RSMV E + ++ + A+L +S L G Q+H
Sbjct: 193 --------------------SIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVH 232
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A AL+ ++ V +AL+ MY K A F ++ + VSWT+++ A Q+
Sbjct: 233 AQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLP-EKNVVSWTAVMTAYTQNERF 291
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY-YNMMKNVHKIKPTPSHFA 554
E+A+QLF + G++P+ TY L +C ++ G + MK H S
Sbjct: 292 EDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGH--WGALSVCN 349
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+++++ ++G + +A+ +MP DVV+W S++
Sbjct: 350 ALMNMYSKSGSIHDAWRVFLSMPWR-DVVSWNSVI 383
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 35/267 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L ++ +G VHA+ +K L +V++ ++L++ Y K + A F+ +P
Sbjct: 212 YVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLP 271
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW +++AY T NE RF++A+++F++
Sbjct: 272 EKNVVSWTAVMTAY-----------------------------TQNE--RFEDALQLFLD 300
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ + V P +FT L SC L L G + + +KTG G ++V N+L+NMY+K G
Sbjct: 301 LEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGS 360
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAG 251
A VF M ++V SWN V+ + H G A F M+ ++ VT+ ++
Sbjct: 361 IHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLA 420
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDK 278
+Q G E L M+K+ +KP +
Sbjct: 421 CAQLGLVDEGLYYLNIMMKEMGIKPGR 447
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 378/649 (58%), Gaps = 70/649 (10%)
Query: 140 QVLPTQF---TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
V P++F + L C + S GK +H ++K G GC L+++A
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRG--GC-------LDLFA----- 75
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
WN+++++++ S L A FD+M ER+ +++ ++I GY+++
Sbjct: 76 -----------------WNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESV 118
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
EA+ +F + ++ + P++FT AS L ACA +E L LG QIH ++I+ + V
Sbjct: 119 RFLEAIELFVRLHRE--VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVS 176
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
NAL+ YA K G + + +F R+
Sbjct: 177 NALMDVYA---------------------------------KCGRMENSMELFAESPHRN 203
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V W ++VG+ Q G + A+ LF +M+ + T S+ L +SLA+L+ G QIH+
Sbjct: 204 DVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHS 263
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+++ + V+NALI MY+K G+I AR VF+L++ +Q+ VSW +MI + HGLG
Sbjct: 264 LTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN-KQDEVSWNAMISGYSMHGLGR 322
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA+++F++M E +KPD +T+VGVL+AC + GL++QGQ Y+ M H I+P H+ M
Sbjct: 323 EALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCM 382
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
V LLGR G L +A I+ +P +P V+ W +LL AC +H +++LG+I+A+++L +EP +
Sbjct: 383 VWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDK 442
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
+ L N+Y++ +W++ A++RK+MK GVKK G SW++ Q VH F V D HP+
Sbjct: 443 ATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVR 502
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I + + + K+ G++P+ VL DVE++ KE++L HSE+LA++FG+I TP + +
Sbjct: 503 VINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPI 562
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RIMKNLR+C DCH+AIK I K+V REIVVRD RFHHF++GLCSC DYW
Sbjct: 563 RIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 232/504 (46%), Gaps = 102/504 (20%)
Query: 10 ISPLEF----YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
+SP EF YA+ LQ ++ P GK +H I+K G L +F
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLF---------------- 74
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+WN +L+ Y K L A ++F+ MP R+++S+ T+I Y E R
Sbjct: 75 ---------------AWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVR 119
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
F AI +FV + +VLP QFT SVL +C + L+ G ++H V+K GL V V+N+
Sbjct: 120 FLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNA 178
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+++YAK G R++ + F + R+ VTW
Sbjct: 179 LMDVYAKCG-------------------------------RMENSMELFAESPHRNDVTW 207
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N++I G+ Q G +AL +F NML + ++ + T +S L ACA+L L+ G QIH+ +
Sbjct: 208 NTVIVGHVQLGDGEKALRLFLNML-EYRVQATEVTYSSALRACASLAALEPGLQIHSLTV 266
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
+T FD V NALI YAK G ++ A
Sbjct: 267 KTTFDKDIVVTNALIDMYAKCGSIK---------------------------------DA 293
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R +FD + +D V+W AM+ GY +GL ++A+ +F M KP+ T +LS ++
Sbjct: 294 RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANA 353
Query: 426 ASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
LD G+ S ++ G + ++ + + G+++ A ++ + I ++ + W +
Sbjct: 354 GLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 413
Query: 485 MIVALAQHGLGEEAIQLFERMLEL 508
++ A H E +R+LE+
Sbjct: 414 LLGACVIHNDIELGRISAQRVLEM 437
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 166/309 (53%), Gaps = 10/309 (3%)
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK---VGGVEIAQKIVEQSGISYLNV 346
+++ KL ++ ++ +EF++ NAL C K G + +I+++ G L++
Sbjct: 17 SVQSAKLTQEFVGHVSPSEFNSHA-YANALQDCIQKDEPSRGKGLHCEILKRGGC--LDL 73
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
A+ LL+ Y+K + A ++FD + +R+ +++ ++ GY ++ +A+ELF + RE
Sbjct: 74 FAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE 133
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
PN +T +++L +++ L+ G QIH ++ G S + VSNAL+ +Y+K G + +
Sbjct: 134 -VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENS 192
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+F R + V+W ++IV Q G GE+A++LF MLE ++ +TY L AC
Sbjct: 193 MELFAESPHRND-VTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACAS 251
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+E G + +++ K A ++D+ + G +++A + ++ + D V+W
Sbjct: 252 LAALEPGLQIHSLTVKTTFDKDIVVTNA-LIDMYAKCGSIKDA-RLVFDLMNKQDEVSWN 309
Query: 587 SLLSACRVH 595
+++S +H
Sbjct: 310 AMISGYSMH 318
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
K FD+ V T N ++ YAK G + A VF+LM +D VSW +I Y+ G +
Sbjct: 267 KTTFDKDIVVT----NALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGR 322
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSL 186
A+R+F +M + +V P + T VL++C G L G+ + +++ G+ C+ +
Sbjct: 323 EALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCM 382
Query: 187 LNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ + + G A + D + + +V W ++ + ++L R +++E +
Sbjct: 383 VWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEME 438
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/748 (34%), Positives = 405/748 (54%), Gaps = 68/748 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTES--ISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+H++ IK GL + ++ F ES + YA+KVFDE+P ++
Sbjct: 54 IHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSV------------- 100
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
W T+I Y+ I ++ + ++ M+ + P FT +L
Sbjct: 101 ------------------FIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLL 142
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
T +M K G ++ AV G N+
Sbjct: 143 KGFTK------------------------------DMALKYGKVLLNHAVIHGFLDSNLF 172
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+ L G ++ AR FD +VVTWN +++GY++ E+ +F M K
Sbjct: 173 VQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKC 232
Query: 273 S-LKPDKFTLASTLSACANLEKLKLGKQIH-AYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ P+ TL LSAC+ L+ L GK I+ YI + + NALI +A G ++
Sbjct: 233 ECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMD 292
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A+ + ++ + +VI++T+++ G+ I AR+ FD + +RD V+WTAM+ GY +
Sbjct: 293 AARGVFDE--MKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRM 350
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
K+ + LFR M KP+ +T+ ++L+ + L +L+ G+ ++ + +
Sbjct: 351 NRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIG 410
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NALI MY K GN+ A+++FN + +++ +WT+MIV LA +G GEEA+ +F MLE +
Sbjct: 411 NALIDMYFKCGNVEKAKKIFNEMQ-KKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASV 469
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
PD ITY+GV+ ACTH GLV +G+ +++ M H IKP +H+ MVDLLGRAG L+EA
Sbjct: 470 TPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEAL 529
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
I NMP++P+ + WGSLL ACRVHKN+ L ++AA ++L +EP+N Y LCN+Y++C
Sbjct: 530 EVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACK 589
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KW++ N+RK M G+KK G S +++ V+ F D HPQ IY K+ + ++
Sbjct: 590 KWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLS 649
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
G+ PDT+ V DV E+ KE L HSEKLAIA+ LIS+ + T+RI+KNLR+C DCH
Sbjct: 650 NAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHH 709
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGL 778
+ K+ +RE++VRD TRFHHF+ GL
Sbjct: 710 MAMVVSKVYNRELIVRDKTRFHHFRHGL 737
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 245/505 (48%), Gaps = 71/505 (14%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGK-LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
I P F + LL+ K GK L++ +I L ++F++ ++ ++ ++YA
Sbjct: 131 IKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYA 190
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+K+FD + +WN +LS YN R++
Sbjct: 191 RKIFDMGDGWEVVTWNVVLSG-------------------------------YNRFKRYE 219
Query: 128 NAIRMFVEMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL-SGCVNVTN 184
+ R+F+EM + + V P T+ +L++C+ L DL GK +++ +K G+ + + N
Sbjct: 220 ESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILEN 279
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L++M+A G+ A+ VFD M+ ++V SW +V+ ++ R+DLAR FDQM ERD V+
Sbjct: 280 ALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVS 339
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W +MI GY + E L +F +M + S++KPD+FT+ S L+ACA+L L+LG+ YI
Sbjct: 340 WTAMIDGYLRMNRFKEVLTLFRDM-QMSNVKPDEFTMVSILTACAHLGALELGEWAKTYI 398
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+ + +GNALI Y K G VE
Sbjct: 399 DKNKIKNDTFIGNALIDMYFKCGNVE---------------------------------K 425
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A++IF+ ++ +D WTAM+VG NG ++A+ +F M+ P+ T ++ +
Sbjct: 426 AKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTH 485
Query: 425 LASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ + GK ++ A++ G +L+ ++ + +AG++ A V + + ++ W
Sbjct: 486 VGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWG 545
Query: 484 SMIVALAQHGLGEEAIQLFERMLEL 508
S++ A H + A +LEL
Sbjct: 546 SLLGACRVHKNVQLAEMAANEILEL 570
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 39/207 (18%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +++S L AHL L G+ I K + F+ N+L++ Y K +
Sbjct: 370 PDEFTMVSILTACAHLGALEL-------GEWAKTYIDKNKIKNDTFIGNALIDMYFKCGN 422
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ AKK+F+EM K +W T +IV
Sbjct: 423 VEKAKKIFNEMQKKDKFTW-------------------------------TAMIVGLANN 451
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS-FVVKTGLSGCVNV 182
G + A+ MF M++ V P + T V+ +CT +G ++ GK S V+ G+ +
Sbjct: 452 GHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTH 511
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++++ + G A V M +K
Sbjct: 512 YGCMVDLLGRAGHLKEALEVIMNMPVK 538
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/758 (33%), Positives = 411/758 (54%), Gaps = 67/758 (8%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G +HA +IK G F+ N+LM Y K + ++FDEMP + + SWNT++S+
Sbjct: 207 LGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVV 266
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K+ + A E+F M R + R+ FT+++
Sbjct: 267 KEMMYERAFELFRDM-------------------RRIDGFRI-----------DHFTLST 296
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L + L + G+++H+ V+K G ++V N+L+ Y K G A+F+ MR+++
Sbjct: 297 ILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRD 355
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +W +++ ++ G DLA FD+M R+ +++N++++G+ QNG +AL F M++
Sbjct: 356 VITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVE 415
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ D FTL L+AC L + K+ KQIH +I++ F + + AL+ + G +
Sbjct: 416 EGVELTD-FTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMA 474
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
AQK+ Q S I WT+M+ GY +N
Sbjct: 475 DAQKMFSQGSFSQSGSI-------------------------------IWTSMICGYARN 503
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLS-AMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
++A+ LF EG + S A+L V +LA + GKQIH AL+SG S L V
Sbjct: 504 AQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGV 563
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N++ITMYSK N++ A +VFN++ + VSW +I H G+EA+ ++ +M + G
Sbjct: 564 GNSIITMYSKCSNMDDAIKVFNVMP-AHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAG 622
Query: 510 IKPDHITYVGVLTACTH--GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
IKPD +T+V +++A H LV+ +R + MK ++ I PT H+ S+V +LG GLL+
Sbjct: 623 IKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLE 682
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I MP+EP+ W +LL ACR+H N +GK AA+ LL ++P + Y + NLYS
Sbjct: 683 EAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYS 742
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G+W + +R+ M+ G +K G SW+ +NKVH F D HPQ I++ + +
Sbjct: 743 AYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIM 802
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E + G+VPDT+ VLH+VEE K+ L +HS K+A +GL+ T +RI+KN+ +C D
Sbjct: 803 ECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGD 862
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ +K++ + REI +RDA+ H F G CSC+DYW
Sbjct: 863 CHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 249/526 (47%), Gaps = 52/526 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ AY K G + A +VF + + VS+T +I + + R + A+ +F M +
Sbjct: 127 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 186
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+F+ ++L C L DL G ++H+ V+K G V+N+L+ +Y K G +
Sbjct: 187 LNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQL 246
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M ++++SWN V+S + + M ER A
Sbjct: 247 FDEMPHRDIASWNTVISSVVK-----------EMMYER--------------------AF 275
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F +M + + D FTL++ L A L + +G++IHA++I+ F++ V NALI
Sbjct: 276 ELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRF 334
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G ++ + E+ + +VI +T ++ Y++ G A +FD + R+ +++ A
Sbjct: 335 YTKCGSIKHVVALFEKMRVR--DVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNA 392
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+L G+ QNG A+ F MV EG + ++TL+ +L+ L KQIH L+ G
Sbjct: 393 ILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG 452
Query: 443 EASSLSVSNALITMYSKAGNINAARRV-FNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S+ + AL+ M ++ G + A+++ + ++ WTSMI A++ EEAI L
Sbjct: 453 FGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISL 512
Query: 502 F-ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA------ 554
F + LE + D + VL C E G++ + H +K S F
Sbjct: 513 FCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIH-----CHALK---SGFLSDLGVG 564
Query: 555 -SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
S++ + + + +A MP D+V+W L++ +H+ D
Sbjct: 565 NSIITMYSKCSNMDDAIKVFNVMPAH-DIVSWNGLIAGHLLHRQGD 609
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y+K+G + A ++F L +VV++TAM+ G+ ++ + A+E+F M G + N
Sbjct: 129 LIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELN 188
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
++ A+L+V L L+ G Q+HA ++ G + VSNAL+ +Y K G +++ ++F+
Sbjct: 189 EFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFD 248
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVGVLTACTHGGLV 530
+ R + SW ++I ++ + + E A +LF M + G + DH T +L A GL
Sbjct: 249 EMPHR-DIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAAR--GLA 305
Query: 531 EQGQRYYNMMKNVHKI--KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
R + +V KI + S +++ + G ++ E M + DV+ W +
Sbjct: 306 SMVGR--EIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVR-DVITWTEM 362
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
++A + L +A E + NS +Y+A+ + + G+ A M GV+
Sbjct: 363 ITA---YMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVE 419
Query: 649 KT 650
T
Sbjct: 420 LT 421
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/756 (33%), Positives = 409/756 (54%), Gaps = 102/756 (13%)
Query: 32 GKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
GK +H+RI GL L V L+NSL L+ YA
Sbjct: 140 GKAIHSRISGTKGLKLDVILENSL-------------------------------LTMYA 168
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G L+ A +F M R SW +I Y + G F+ AIR++ +M V P+ T TS
Sbjct: 169 KCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTS 225
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C+ LG L G+K+H+ + G +++ N+LL MYA+ K + D ++
Sbjct: 226 VLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARC------KCLDDAAKI-- 277
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
F ++ RDVV+W++MIA +++ EA+ ++ M +
Sbjct: 278 -----------------------FQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKM-Q 313
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
++P+ +T AS L ACA++ L+ G+ +H I+ GN G +
Sbjct: 314 LEGVRPNYYTFASVLLACASVGDLRAGRAVHDQIL----------GN----------GYK 353
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
I ++ T L+D Y G + AR +FD + +RD WT ++ GY +
Sbjct: 354 I-------------TLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ 400
Query: 391 GLNKDAVELFRSMVREGPKPNNYTL-SAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G +EL+R M P + S ++S +SL + +Q H+ G S +
Sbjct: 401 GHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVL 460
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+ +L+ MYS+ GN+ +AR+VF+ + R +T++WT++I A+HG A+ L++ M G
Sbjct: 461 ATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKHGEHGLALGLYKEMELEG 519
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+P +T++ VL AC+H GL EQG++ + +++ + + P +H++ ++DLL RAG L +A
Sbjct: 520 AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDA 579
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
I MP+EP+ V W SLL A R+HK++ AA ++ ++P + +Y L N+++
Sbjct: 580 EELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVT 639
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G A++R +M GVKK +G SW+++ +++H F V D HP+ I+ ++ ++ +I
Sbjct: 640 GNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKI 699
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
KE G+VP++ VLHDV E KE +LR HSEKLAIAFGLI+T TTLRI LR+C+DCH
Sbjct: 700 KEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCH 759
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
SA+KFI + REI+VRD++RFH F+ G CSC DYW
Sbjct: 760 SAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 194/376 (51%), Gaps = 48/376 (12%)
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
G NV N +V + G + ARA FD + ++ +W SM+ Y+QNG+ AL +
Sbjct: 52 GAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDL 111
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCY 323
+ M L+P+ + L ACA+++ L+ GK IH+ I T+ + N+L++ Y
Sbjct: 112 YKRM----DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMY 167
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G +E A+R+F+ + R V +W AM
Sbjct: 168 AKCGSLE---------------------------------DAKRLFERMSGRSVSSWNAM 194
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ Y Q+G ++A+ L+ M E P+ T +++LS S+L LD G++IHA G
Sbjct: 195 IAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGT 251
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
LS+ NAL+TMY++ ++ A ++F + R++ VSW++MI A A+ L +EAI+ +
Sbjct: 252 ELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVVSWSAMIAAFAETDLFDEAIEFYS 310
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGR 562
+M G++P++ T+ VL AC G + G+ ++ ++ N +KI T + ++VDL
Sbjct: 311 KMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKI--TLVNGTALVDLYTS 368
Query: 563 AGLLQEA---YNFIEN 575
G L EA ++ IEN
Sbjct: 369 YGSLDEARSLFDQIEN 384
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 156/287 (54%), Gaps = 15/287 (5%)
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ FD++G +AL C +I +I SG + NV ++ Y K G + AR
Sbjct: 22 SRFDSSGHYRDALRQCQDLESVRQIHDRI---SGAASANVFLGNEIVRAYGKCGSVASAR 78
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
FD++ ++ +W +ML Y QNG + A++L++ M +PN + +L +S+
Sbjct: 79 AAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIK 135
Query: 427 SLDHGKQIHASALRSGEASSLSV--SNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+L+ GK IH S + + L V N+L+TMY+K G++ A+R+F + R + SW +
Sbjct: 136 ALEEGKAIH-SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVS-SWNA 193
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI A AQ G EEAI+L+E M ++P T+ VL+AC++ GL++QG++ + ++ +
Sbjct: 194 MIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISS-R 249
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ S +++ + R L +A + +P DVV+W ++++A
Sbjct: 250 GTELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVVSWSAMIAA 295
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/512 (42%), Positives = 328/512 (64%), Gaps = 5/512 (0%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D FTL L +CA+L ++ +G+ +H +R + VG +LI Y K G + A+K+
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++ + ++ ++ L+ GY+K G+IG A +F+ + R++V+WTAM+ GY QNG + A
Sbjct: 166 DKMIVR--DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQA 223
Query: 397 VELFRSMVREGP--KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+ LF M+++G KPN T+ ++L + A+L+ G++IH A G + SV AL
Sbjct: 224 LGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALA 283
Query: 455 TMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
MY+K ++ AR F++I + ++W +MI A A HG G EA+ +FE ML G++PD
Sbjct: 284 GMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPD 343
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
+T++G+L+ C+H GL++ G ++N M +H ++P H+A +VDLLGRAG L EA I
Sbjct: 344 AVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELI 403
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
MP++ WG+LL+ACR H+NL++ ++AA +L ++EPDNSG Y L NLY+ G WE
Sbjct: 404 SQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWE 463
Query: 634 DAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMG 693
+ +R +KY G+KK+ G SW++I K H+F D HPQ IY + + ++IK G
Sbjct: 464 EVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAG 523
Query: 694 FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIK 753
++PDT+ VLHD+ E+ KE L HSEKLAIAFGL++T LR+ KNLR+C DCH+A K
Sbjct: 524 YIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATK 583
Query: 754 FICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
FI K+ +REI+VRD RFH FK G CSC DYW
Sbjct: 584 FISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 218/453 (48%), Gaps = 55/453 (12%)
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+L FT+ VL SC L + G+ VH ++ GL G V SL++MY K G A+
Sbjct: 103 LLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDAR 162
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+FD M +++++SWN +++ ++ G + +A F++M R++V+W +MI+GY+QNG+ +
Sbjct: 163 KLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQ 222
Query: 261 ALGMFANMLKDSS-LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
ALG+F ML+D S +KP+ T+ S L ACA L+ G++IH + V AL
Sbjct: 223 ALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTAL 282
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDV 377
YAK +VE AR FD + +++
Sbjct: 283 AGMYAK------CYSLVE---------------------------ARCCFDMIAQNGKNL 309
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+AW M+ Y +G +AV +F +M+R G +P+ T +LS S +D G H +
Sbjct: 310 IAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLN-HFN 368
Query: 438 ALRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+ + + V + ++ + +AG + A+ + + + + W +++ A H
Sbjct: 369 DMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSH-RN 427
Query: 496 EEAIQLFERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
E +L R L + ++PD+ YV + G+ E+ ++ ++K +K +P
Sbjct: 428 LEIAELAARRLFV-LEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLK-YQGMKKSPG--C 483
Query: 555 SMVDLLGRAGLL----------QEAYNFIENMP 577
S +++ G++ L +E Y F+E +P
Sbjct: 484 SWIEINGKSHLFMGADKSHPQAKEIYKFLEALP 516
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 32/262 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH + ++ GL ++ SL++ Y K I A+K+FD+M V+ + SWN +++ Y
Sbjct: 125 MGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYM 184
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QVLPTQFTV 148
K+G + +A ++F M +R+ VSWT +I Y + G + A+ +F EM+QD ++ P T+
Sbjct: 185 KEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTI 244
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
SVL +C L G+++H F GL +V +L MYAK + A+ FD M
Sbjct: 245 VSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFD-MIA 303
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+N ++++ WN+MI Y+ +G EA+ +F NM
Sbjct: 304 QN----------------------------GKNLIAWNTMITAYASHGCGVEAVSIFENM 335
Query: 269 LKDSSLKPDKFTLASTLSACAN 290
L+ + ++PD T LS C++
Sbjct: 336 LR-AGVQPDAVTFMGLLSGCSH 356
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 46/238 (19%)
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+E + M G +N+TL +L + L+ + G+ +H LR G V +LI M
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 457 YSKAGNINAARRVF------NLIHW------------------------RQETVSWTSMI 486
Y K G I AR++F ++ W + VSWT+MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 487 VALAQHGLGEEAIQLFERMLELG--IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
Q+G E+A+ LF+ ML+ G +KP+ +T V VL AC +E+G+R ++ +
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIE-----NMPLE--PDVVAWGSLLSACRVH 595
H S V AG+ + Y+ +E +M + +++AW ++++A H
Sbjct: 272 L------HLNSSVQ-TALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASH 322
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/698 (35%), Positives = 391/698 (56%), Gaps = 51/698 (7%)
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
++G L++ VFN R +V W +I V+ G + R F D ++P QF
Sbjct: 46 GQRGGLEI---VFNQQLTRLAVPWNSI-VSPVRCGTSISHNRSFAFRHTD-LIPKQFKRF 100
Query: 150 SVLASCTALGDLSAGKKVHSFV--VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ C + S V+S V + +S C +V+ ++A+V + F G R
Sbjct: 101 NTNKGCCIFREASQFIVVYSIVQSLVFAISSCTSVSYCSA-IHARVIKSLNYSDGFIGDR 159
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
L VS++ G + A+ FD+M +D+V+WNS+++G S GY L F
Sbjct: 160 L---------VSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCR 210
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +S +P++ TL S +SACA++ L GK +H +++ V N+LI+ Y K+G
Sbjct: 211 MRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG 270
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
LD A ++F+ + R +V+W +M+V +
Sbjct: 271 ------------------------FLDA---------ASQLFEEMPVRSLVSWNSMVVIH 297
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
NG + ++LF M R G P+ T+ A+L + + IHA R G + +
Sbjct: 298 NHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADI 357
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
++ AL+ +Y+K G +NA+ +F I R + ++WT+M+ A H G EAI+LF+ M++
Sbjct: 358 IIATALLNLYAKLGRLNASEDIFEEIKDR-DRIAWTAMLAGYAVHACGREAIKLFDLMVK 416
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G++ DH+T+ +L+AC+H GLVE+G++Y+ +M V++++P H++ MVDLLGR+G L+
Sbjct: 417 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 476
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
+AY I++MP+EP WG+LL ACRV+ N++LGK AE+LL ++P + Y L N+YS
Sbjct: 477 DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 536
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G W DA+ +R MK + + G S+++ NK+H F V D LHP+ D I+ K+ ++
Sbjct: 537 AAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 596
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+I+E G P T VLHD++E+VK M+ HSEKLAIAFGL+ T L I KNLR+C D
Sbjct: 597 KIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 656
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CHS KF L R I++RD+ RFHHF GLCSCRDYW
Sbjct: 657 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 229/510 (44%), Gaps = 101/510 (19%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HAR+IK + F+ + L++ Y K A+++FDEMP K L SWN+++S + +G
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L F M E GR P + T+ SV+++
Sbjct: 201 LGACLNAFCRM--------------RTESGR----------------QPNEVTLLSVVSA 230
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C +G L GK +H VVK G+SG V NSL+NMY K+G A +F+ M ++++ SW
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N +V +H H+ GY++ G D N++K + +
Sbjct: 291 NSMVVIHNHN--------------------------GYAEKGMD------LFNLMKRAGI 318
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
PD+ T+ + L AC + + + IHAYI R F+A + AL++ YAK+G + ++
Sbjct: 319 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 378
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
I E+ ++DRD +AWTAML GY + +
Sbjct: 379 IFEE---------------------------------IKDRDRIAWTAMLAGYAVHACGR 405
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK---QIHASALRSGEASSLSVSN 451
+A++LF MV+EG + ++ T + +LS S ++ GK +I + R L +
Sbjct: 406 EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRV--EPRLDHYS 463
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
++ + ++G + A + + + W +++ A +G E ++ E++L L
Sbjct: 464 CMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD-P 522
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
DH Y+ + + GL + +MK
Sbjct: 523 SDHRNYIMLSNIYSAAGLWRDASKVRALMK 552
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 66/280 (23%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++K G+ + NSL+N Y K + A ++F+EMPV++L SWN+++ +
Sbjct: 240 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 299
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + ++FNLM + + P Q T+ ++
Sbjct: 300 NGYAEKGMDLFNLMK-------------------------------RAGINPDQATMVAL 328
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT G + +H+++ + G + + + +LLN+YAK+
Sbjct: 329 LRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL------------------ 370
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
GRL+ + F+++ +RD + W +M+AGY+ + EA+ +F M+K+
Sbjct: 371 -------------GRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKE 417
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGK---QIHAYIIRTE 308
++ D T LSAC++ ++ GK +I + + R E
Sbjct: 418 -GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVE 456
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 261/763 (34%), Positives = 398/763 (52%), Gaps = 99/763 (12%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
+ R VGK VH +K L + + N+LM+ Y+K W
Sbjct: 288 REREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSK---------------------WGC 326
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV--QDQVL 142
I+ + +F L N++ VSW T++ ++ G + +M+ + V
Sbjct: 327 IIDSQM----------IFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVK 376
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ T+ + + C L + K++H + +K + N+ + YAK G A+ V
Sbjct: 377 ADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRV 436
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F G+R K ++SW N++I GY+Q+ +L
Sbjct: 437 FHGIRSKTLNSW-------------------------------NALIGGYAQSSDPRLSL 465
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
M K+S L PD FT+ S LSAC+ L+ L+LGK++H +IIR
Sbjct: 466 DAHLQM-KNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRN--------------- 509
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+E+ YL+V++ YI G++ + +FD++ D +V+W
Sbjct: 510 ------------WLERDLFVYLSVLSL------YIHCGELCTVQVLFDAMEDNSLVSWNT 551
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ QNG + A+ LFR MV G +P ++ + S L SL G++ HA AL+
Sbjct: 552 VITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHL 611
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ ++ ++I MY+K G I + +VFN + + SW +MI+ HG +EAI+LF
Sbjct: 612 LEDNAFIACSIIDMYAKNGAITQSSKVFNGLK-EKSAASWNAMIMGYGMHGRAKEAIKLF 670
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M G PD +T++GVLTAC H GL+ +G RY + MK+ +KP H+A ++D+LGR
Sbjct: 671 EEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGR 730
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A M EPDV W SLLS CR+H+NL++G+ A KL ++EP+ Y L
Sbjct: 731 AGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLL 790
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
NLY+ GKW+D +R+ MK + ++K G SW+++ KV F V + + I +
Sbjct: 791 SNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLW 850
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ + +I +MG+ PDT+SV HD+ E+ K + LR HSEKLAI +GLI T E TTLR+ KNL
Sbjct: 851 SILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNL 910
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+C DCH+A K I K+++REIVVRD RFHHF KG CSC DYW
Sbjct: 911 RICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 157/661 (23%), Positives = 284/661 (42%), Gaps = 131/661 (19%)
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
LC+ I++ YA G D + F+ + +++ W +I +Y+ + + MF++M+
Sbjct: 121 VLCT--RIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMI 178
Query: 138 -QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ +LP FT V+ +C + D+ G VH VVKTGL + V N+L++ Y G
Sbjct: 179 SKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFV 238
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A +FD M +N +V+WNSMI +S NG
Sbjct: 239 SDALKLFDIMPERN-------------------------------LVSWNSMIRVFSDNG 267
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
D + PD T+ + L CA ++ +GK +H + ++ D V
Sbjct: 268 -------------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVN 314
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
NAL+ Y+K G + +Q I + + NV+++ T++ G+ GDI FD LR
Sbjct: 315 NALMDMYSKWGCIIDSQMIFKLNNNK--NVVSWNTMVGGFSAEGDI---HGTFDLLRQ-- 367
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
ML G E + D V + ++ P + S + S+ K++H
Sbjct: 368 ------MLAGSED--VKADEVTILNAV------PVCFDESVLPSL----------KELHC 403
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLG 495
+L+ ++NA + Y+K G+++ A+RVF+ I R +T+ SW ++I AQ
Sbjct: 404 YSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGI--RSKTLNSWNALIGGYAQSSDP 461
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLV----EQGQRYY--- 537
++ +M G+ PD+ T +L+AC+ HG ++ E+ Y
Sbjct: 462 RLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 521
Query: 538 -NMMKNVHKIKPTPSHFASMVD---------LLG--RAGLLQEAYNFIENMPL---EPDV 582
++ + ++ F +M D + G + G + A M L +P
Sbjct: 522 LSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCG 581
Query: 583 VAWGSLLSACRVHKNLDLGKIA-AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
++ ++ AC + +L LG+ A A L + DN+ ++ ++Y+ G A + S
Sbjct: 582 ISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNG-----AITQSS 636
Query: 642 MKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
+ G+K+ SW + + G ++AI K+++E++ G PD +
Sbjct: 637 KVFNGLKEKSAASWNAMIMGYGMHG------RAKEAI-----KLFEEMQRTGRNPDDLTF 685
Query: 702 L 702
L
Sbjct: 686 L 686
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 319 LISCYAKVGGVEIAQKIVEQ-SGISYL--NVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
L+ K +E+ +KI SG + L + + T ++ Y G +R FD+LR +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
++ W A++ Y +N L + +E+F M+ + P+N+T ++ + ++ + G +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +++G L V NAL++ Y G ++ A ++F+++ R VSW SMI + +G
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERN-LVSWNSMIRVFSDNG- 267
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
+ PD T V VL C +R + K VH
Sbjct: 268 -----------DDGAFMPDVATVVTVLPVCAR-------EREIGVGKGVH 299
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/760 (32%), Positives = 403/760 (53%), Gaps = 101/760 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++K G L++ N L++ Y K A KVFD
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS------------------ 66
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
MP R+ VSW+ ++ + G K ++ +F EM + + P +FT ++
Sbjct: 67 -------------MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTN 113
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L L G ++H F +K G V V NSL++MY+K G
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG----------------- 156
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
R++ A F ++++R +++WN+MIAG+ GY +AL F M+++
Sbjct: 157 --------------RINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG-MMQE 201
Query: 272 SSLK--PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+++K PD+FTL S L AC++ + GKQIH +++R+ F A + G
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS---------ATITG- 251
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+L+D Y+K G + AR+ FD ++++ +++W+++++GY Q
Sbjct: 252 ---------------------SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQ 290
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G +A+ LF+ + + +++ LS+++ V + A L GKQ+ A A++ SV
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N+++ MY K G ++ A + F + + + +SWT +I +HGLG++++++F ML
Sbjct: 351 LNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I+PD + Y+ VL+AC+H G++++G+ ++ + H IKP H+A +VDLLGRAG L+EA
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ I+ MP++P+V W +LLS CRVH +++LGK + LL I+ N Y + NLY
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQA 529
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G W + N R+ G+KK G SWV+I+ +VH F + HP I + + +
Sbjct: 530 GYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRL 589
Query: 690 K-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT---TLRIMKNLRVC 745
+ E+G+V LHD++++ KE+ LR HSEKLAI L + N T+R+ KNLRVC
Sbjct: 590 REELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVC 649
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH IK + K+ VVRDA RFH F+ G CSC DYW
Sbjct: 650 VDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 228/485 (47%), Gaps = 83/485 (17%)
Query: 141 VLPTQF-TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++P Q + S+L CT G G +VH +++K+G + +N L++MY K + +MA
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
VFD M +NV SW+ ++S H+ +G L + + F +M + +
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY---------------- 104
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
P++FT ++ L AC L L+ G QIH + ++ F+ VGN+L
Sbjct: 105 ----------------PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSL 148
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ Y+K G I A ++F + DR +++
Sbjct: 149 VDMYSKCG---------------------------------RINEAEKVFRRIVDRSLIS 175
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREG---PKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
W AM+ G+ G A++ F M++E +P+ +TL+++L SS + GKQIH
Sbjct: 176 WNAMIAGFVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 437 SALRSGE--ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+RSG SS +++ +L+ +Y K G + +AR+ F+ I + +SW+S+I+ AQ G
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGE 293
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EA+ LF+R+ EL + D ++ L+ QG++ + + T S
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET-SVLN 352
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK----IAAEKLLL 610
S+VD+ + GL+ EA M L+ DV++W +++ H LGK I E L
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKH---GLGKKSVRIFYEMLRH 408
Query: 611 -IEPD 614
IEPD
Sbjct: 409 NIEPD 413
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 102/265 (38%), Gaps = 50/265 (18%)
Query: 410 PNN-YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN L ++L V + D G Q+H L+SG +L SN LI MY K A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC---- 524
VF+ + R VSW++++ +G + ++ LF M GI P+ T+ L AC
Sbjct: 63 VFDSMPERN-VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 525 -------THG--------GLVEQGQRYYNMMKNVHKIKPTPSHFASMVD----------- 558
HG +VE G +M +I F +VD
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 559 ----------LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
L G++QEA N+ PD SLL AC + GK L
Sbjct: 182 GFVHAGYGSKALDTFGMMQEA-----NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 609 L---LIEPDNSGAYSALCNLYSSCG 630
+ P ++ +L +LY CG
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCG 261
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/757 (34%), Positives = 411/757 (54%), Gaps = 103/757 (13%)
Query: 32 GKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
GK +H+RI GL L V L+NSL L+ YA
Sbjct: 140 GKAIHSRISGTKGLKLDVILENSL-------------------------------LTMYA 168
Query: 91 KQGRLDLACEVFNLMPNRDSVS-WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
K G L+ A +F M R SVS W +I Y + G F+ AIR++ +M V P+ T T
Sbjct: 169 KCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFT 225
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL++C+ LG L G+K+H+ + G +++ N+LL MYA+ K + D ++
Sbjct: 226 SVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARC------KCLDDAAKI- 278
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
F ++ RDVV+W++MIA +++ EA+ ++ M
Sbjct: 279 ------------------------FQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKM- 313
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ ++P+ +T AS L ACA++ L+ G+ +H I+ GN G
Sbjct: 314 QLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQIL----------GN----------GY 353
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+I ++ T L+D Y G + AR +FD + +RD WT ++ GY +
Sbjct: 354 KI-------------TLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 400
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTL-SAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
G +EL+R M P + S ++S +SL + +Q H+ G S
Sbjct: 401 QGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV 460
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ +L+ MYS+ GN+ +AR+VF+ + R +T++WT++I A+HG A+ L++ M
Sbjct: 461 LATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKHGEHGLALGLYKEMELE 519
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G +P +T++ VL AC+H GL EQG++ + +++ + + P +H++ ++DLL RAG L +
Sbjct: 520 GAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSD 579
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A I MP+EP+ V W SLL A R+HK++ AA ++ ++P + +Y L N+++
Sbjct: 580 AEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAV 639
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G A++R +M GVKK +G SW+++ +++H F V D HP+ I+ ++ ++ +
Sbjct: 640 TGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPK 699
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IKE G+VP++ VLHDV E KE +LR HSEKLAIAFGLI+T TTLRI LR+C+DC
Sbjct: 700 IKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDC 759
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HSA+KFI + REI+VRD++RFH F+ G CSC DYW
Sbjct: 760 HSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 194/377 (51%), Gaps = 49/377 (12%)
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
G NV N +V + G + AR FD + ++ +W SM+ Y+QNG+ AL +
Sbjct: 52 GAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDL 111
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCY 323
+ M L+P+ + L ACA++E L+ GK IH+ I T+ + N+L++ Y
Sbjct: 112 YKRM----DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMY 167
Query: 324 AKVGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
AK G +E A+++ E+ SG R V +W A
Sbjct: 168 AKCGSLEDAKRLFERMSG---------------------------------RRSVSSWNA 194
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y Q+G ++A+ L+ M E P+ T +++LS S+L LD G++IHA G
Sbjct: 195 MIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRG 251
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
LS+ NAL+TMY++ ++ A ++F + R++ VSW++MI A A+ L +EAI+ +
Sbjct: 252 TELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVVSWSAMIAAFAETDLFDEAIEFY 310
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLG 561
+M G++P++ T+ VL AC G + G+ ++ ++ N +KI T + ++VDL
Sbjct: 311 SKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKI--TLVNGTALVDLYT 368
Query: 562 RAGLLQEA---YNFIEN 575
G L EA ++ IEN
Sbjct: 369 SYGSLDEARSLFDQIEN 385
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 156/287 (54%), Gaps = 14/287 (4%)
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ FD++G +AL C +I +I SG + NV ++ Y K G + AR
Sbjct: 22 SRFDSSGHYRDALRQCQDLESVRQIHDRI---SGAASANVFLGNEIVRAYGKCGSVASAR 78
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
FD++ ++ +W +ML Y QNG + A++L++ M +PN + +L +S+
Sbjct: 79 VAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIE 135
Query: 427 SLDHGKQIHASALRSGEASSLSV--SNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+L+ GK IH S + + L V N+L+TMY+K G++ A+R+F + R+ SW +
Sbjct: 136 ALEEGKAIH-SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNA 194
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI A AQ G EEAI+L+E M ++P T+ VL+AC++ GL++QG++ + ++ +
Sbjct: 195 MIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISS-R 250
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ S +++ + R L +A + +P DVV+W ++++A
Sbjct: 251 GTELDLSLQNALLTMYARCKCLDDAAKIFQRLP-RRDVVSWSAMIAA 296
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 272/759 (35%), Positives = 403/759 (53%), Gaps = 101/759 (13%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P + +HA K G + F+ +SL++ Y+ ++S+A+ VFD + W
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGI------IW------ 213
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
+D+V+WT ++ Y+E ++A+ F +M P F +
Sbjct: 214 -------------------KDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVL 254
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
TSVL + L GK +H VKT +V +LL+MYAK G
Sbjct: 255 TSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCG-------------- 300
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++ AR F+ + DV+ W+ +I+ Y+Q+ + +A MF M
Sbjct: 301 -----------------YIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM 343
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ SS+ P++F+L+ L ACAN+ L LG+QIH +I+ +++ VGNAL+ YAK
Sbjct: 344 MR-SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRN 402
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+E + +I F SLRD + V+W ++VGY
Sbjct: 403 MENSLEI---------------------------------FRSLRDANEVSWNTIIVGYC 429
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
Q+G +DA+ +F+ M T S++L ++ AS+ H QIH+ +S +
Sbjct: 430 QSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTI 489
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V N+LI Y+K G I A +VF I + + VSW ++I A HG +A++LF RM +
Sbjct: 490 VCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDALELFNRMNKS 548
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
KP+ +T+V +L+ C GLV QG +N M H+IKP+ H+ +V LLGRAG L +
Sbjct: 549 DTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLND 608
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FI ++P P + W +LLS+C VHKN+ LGK +AEK+L IEP + Y L N+Y++
Sbjct: 609 ALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAA 668
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G + A +RKSM+ +GVKK G SWV+I+ +VH F V HP I N M + W
Sbjct: 669 AGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMR-IINAMLE-WLN 726
Query: 689 IK--EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+K G+VPD VLHDV+E+ K +ML HSE+LA+A+GL TP +RIMKNLR C
Sbjct: 727 LKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCL 786
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+ K I K+V REIVVRD RFHHF +G+CSC DYW
Sbjct: 787 DCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 153/581 (26%), Positives = 257/581 (44%), Gaps = 101/581 (17%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCG--LHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
A LLQ + + G+ VHAR+++ G L F N L+N
Sbjct: 51 ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNL----------------- 93
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
YAK G L A +F+ MP R+ VS+ T++ Y G F+ A +F
Sbjct: 94 --------------YAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFR 139
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+ ++ F +T++L A+ +H+ K G V +SL++ Y+ G
Sbjct: 140 RLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCG 199
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ VFDG +I +D VTW +M++ YS+
Sbjct: 200 AVSHARCVFDG-------------------------------IIWKDAVTWTAMVSCYSE 228
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
N +AL F+ M + + KP+ F L S L A L LGK IH ++T D
Sbjct: 229 NDIPEDALNTFSKM-RMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPH 287
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
VG AL+ YAK G +E AR +F+ +
Sbjct: 288 VGGALLDMYAKCGYIE---------------------------------DARTVFEIIPH 314
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
DV+ W+ ++ Y Q+ N+ A E+F M+R PN ++LS +L +++A LD G+QI
Sbjct: 315 DDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQI 374
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H ++ G S L V NAL+ +Y+K N+ + +F + E VSW ++IV Q G
Sbjct: 375 HNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANE-VSWNTIIVGYCQSGF 433
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
E+A+ +F+ M + +T+ VL AC + ++ + +++++ T
Sbjct: 434 AEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIV-CN 492
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
S++D + G +++A E++ ++ DVV+W +++S +H
Sbjct: 493 SLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALH 532
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 236/545 (43%), Gaps = 113/545 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP L S +L++ + + +GK +H +K + +L++ YAK
Sbjct: 249 PNPFVLTS-------VLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGY 301
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A+ VF+ +P + W+ ++S YA+ +Y
Sbjct: 302 IEDARTVFEIIPHDDVILWSFLISRYAQ---------------------------SYQN- 333
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
+ A MF+ M++ V+P +F+++ VL +C + L G+++H+ V+K G + V
Sbjct: 334 ---EQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVG 390
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+L+++YAK + + +F +R N SWN
Sbjct: 391 NALMDVYAKCRNMENSLEIFRSLRDANEVSWN---------------------------- 422
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
++I GY Q+G+ +AL +F M + + + + T +S L ACAN +K QIH+
Sbjct: 423 ---TIIVGYCQSGFAEDALSVFQEM-RAAHVLSTQVTFSSVLRACANTASIKHTVQIHSL 478
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I ++ F+ V N+LI YAK G + A K
Sbjct: 479 IEKSTFNNDTIVCNSLIDTYAKCGCIRDALK----------------------------- 509
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+F+S+ DVV+W A++ GY +G DA+ELF M + KPN+ T A+LSV
Sbjct: 510 ----VFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCG 565
Query: 424 SLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
S ++ G + S + S+ ++ + +AG +N A + I + W
Sbjct: 566 STGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVW 625
Query: 483 TSMIVALAQH---GLGEEAIQLFERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYN 538
+++ + H LG+ + E++LE I+P D TYV + G+++Q
Sbjct: 626 RALLSSCVVHKNVALGKFSA---EKVLE--IEPQDETTYVLLSNMYAAAGILDQVALLRK 680
Query: 539 MMKNV 543
M+N+
Sbjct: 681 SMRNI 685
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 111/270 (41%), Gaps = 43/270 (15%)
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV--SNALITMYSKAGNINA 465
PK ++Y + +L + G+ +HA ++ G + L +N L+ +Y+K G + A
Sbjct: 43 PKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAA 102
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL---- 521
ARR+F+ + R VS+ +++ A G EEA LF R+ G + +H +L
Sbjct: 103 ARRLFDGMPERN-MVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLV 161
Query: 522 -------TACTHGGLVEQGQRYY----NMMKNVHKIKPTPSH---------------FAS 555
T C H + G + + + + + SH + +
Sbjct: 162 AMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTA 221
Query: 556 MVDLLGRAGLLQEAYNFIENMPL---EPDVVAWGSLLSACRVHKNLDLGK----IAAEKL 608
MV + ++A N M + +P+ S+L A + LGK A + L
Sbjct: 222 MVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTL 281
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
EP GA L ++Y+ CG EDA +
Sbjct: 282 CDTEPHVGGA---LLDMYAKCGYIEDARTV 308
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/681 (36%), Positives = 393/681 (57%), Gaps = 37/681 (5%)
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A ++ M+ + + +T ++ +C+ K+VH+ V+K G V V N+L+N
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR----------------- 231
++ + A VF+ + + SWN +++ +I G ++ A+
Sbjct: 257 CFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSM 316
Query: 232 --------------AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
FD+M+E+D+VTW+++IA + QN EA+ F M K + D
Sbjct: 317 IVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMV-D 375
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+ S LSACANL + +GK IH+ ++ ++ + NALI Y+K G + +A+K+ +
Sbjct: 376 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFD 435
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
++ + L++I++ +++ GY+K + A+ IFDS+ ++DVV+W++M+ GY QN L + +
Sbjct: 436 EAYL--LDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETL 493
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
LF+ M G KP+ TL +++S + LA+L+ GK +HA R+G ++ + LI MY
Sbjct: 494 ALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY 553
Query: 458 SKAGNINAARRVF-NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
K G + A VF +I + +W ++I+ LA +GL E ++ +F M + + P+ IT
Sbjct: 554 MKCGCVETALEVFYGMI--EKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEIT 611
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
++GVL AC H GLV++GQ ++ M + HKI+P H+ MVDLLGRAG LQEA + M
Sbjct: 612 FMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRM 671
Query: 577 PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P+ PDV WG+LL AC+ H + ++G+ KL+ ++PD+ G + L N+Y+S GKW+D
Sbjct: 672 PMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVL 731
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVP 696
IR M V K G S ++ +H F D HP DAI + + ++ ++K G+ P
Sbjct: 732 EIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTP 791
Query: 697 DTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFIC 756
D VL DV+E+ KE L HSEKLAIAFGLI+ T +RIMKNLR+CNDCH+A K I
Sbjct: 792 DINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLIS 851
Query: 757 KLVDREIVVRDATRFHHFKKG 777
K R+IVVRD RFHHF++G
Sbjct: 852 KAFCRKIVVRDRHRFHHFEQG 872
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 262/531 (49%), Gaps = 68/531 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L+Q+ R+ + K VH ++K G V+++N+L+N ++ +++ A +VF+E
Sbjct: 216 YPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESS 275
Query: 76 VKTLCSWNTILSAYAKQGRLDLA-------------------------------CEVFNL 104
V SWN+IL+ Y + G ++ A C++F+
Sbjct: 276 VLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDE 335
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
M +D V+W+ +I + + ++ AIR FV M + V+ + S L++C L ++ G
Sbjct: 336 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 395
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
K +HS +K G +N+ N+L+ MY+K GD M+A+ +FD L ++ SWN ++S ++
Sbjct: 396 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 455
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
+D A+A FD M E+DVV+W+SMI+GY+QN E L +F M + S KPD+ TL S
Sbjct: 456 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEM-QMSGFKPDETTLVSV 514
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+SACA L L+ GK +HAYI R +G LI Y K G VE A +
Sbjct: 515 ISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE---------- 564
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+F + ++ + W A+++G NGL + ++++F +M
Sbjct: 565 -----------------------VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 601
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNI 463
+ PN T +L + +D G+ S + + ++ ++ + +AG +
Sbjct: 602 KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL 661
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
A + N + + +W +++ A +HG E ++ +++EL +PDH
Sbjct: 662 QEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIEL--QPDH 710
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 49/364 (13%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+S L A+LL N+ GKL+H+ +K G + L+N+L+ Y+K I A+K
Sbjct: 380 VSALSACANLLVVNM-------GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 432
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
+FDE + L SWN+++S Y K +D A +F+ MP +D VSW+++I Y + F
Sbjct: 433 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 492
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ +F EM P + T+ SV+++C L L GK VH+++ + GL+ V + +L++M
Sbjct: 493 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 552
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K G A VF GM K +S TWN++I
Sbjct: 553 YMKCGCVETALEVFYGMIEKGIS-------------------------------TWNALI 581
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ-----IHAYI 304
G + NG +L MF+NM K + P++ T L AC ++ + G+ IH +
Sbjct: 582 LGLAMNGLVESSLDMFSNM-KKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHK 640
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
I+ G ++ + G ++ A++++ + ++ +V + LL K GD
Sbjct: 641 IQPNVKHYG----CMVDLLGRAGKLQEAEELLNRMPMTP-DVATWGALLGACKKHGDSEM 695
Query: 365 ARRI 368
RR+
Sbjct: 696 GRRV 699
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 82/207 (39%), Gaps = 43/207 (20%)
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Y Q A L++SM+ +NYT ++ S S KQ+H L+ G S
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ V N LI +S N+ A RVFN ++VSW S++ + G EEA ++ +M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESS-VLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
E I + SM+ L G GL
Sbjct: 306 PERSIIASN----------------------------------------SMIVLFGMRGL 325
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSAC 592
+ EA + M LE D+V W +L+ AC
Sbjct: 326 VVEACKLFDEM-LEKDMVTWSALI-AC 350
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/759 (34%), Positives = 402/759 (52%), Gaps = 102/759 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA GLH +F+ +L++ Y +
Sbjct: 118 GRTIHAHAAAVGLHTDLFVSTALIDLYIRC------------------------------ 147
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ--VLPTQFTVT 149
R A VF MP RD V+W ++ Y G + +AI ++M QD+ + P T+
Sbjct: 148 -ARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDM-QDRGGLRPNASTLV 205
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGC---VNVTNSLLNMYAKVGDEMMAKAVFDGM 206
S+L G L G VH++ ++ L V + +LL+MYAK + A VF GM
Sbjct: 206 SLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGM 265
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
++N VTW+++I G+ EA +F
Sbjct: 266 TVRNE-------------------------------VTWSALIGGFVLCDRMTEAFNLFK 294
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+ML + ++AS L CA+L L++G Q+HA + ++ A GN+L+S YA
Sbjct: 295 DMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYA-- 352
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
K G I A +FD + +D +++ A+L G
Sbjct: 353 -------------------------------KAGLINEATMLFDEIAIKDTISYGALLSG 381
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QNG ++A +F+ M +P+ T+ +++ S LA+L HG+ H S + G A
Sbjct: 382 YVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALE 441
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
S+ N+LI MY+K G I+ +R+VF+ + R + VSW +MI HGLG+EA LF M
Sbjct: 442 TSICNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHGLGKEATTLFLSMK 500
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G +PD +T++ ++ AC+H GLV +G+ +++ M + + I P H+ MVDLL R G L
Sbjct: 501 NQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFL 560
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EAY FI++MPL+ DV WG+LL ACR+HKN+DLGK + + + P+ +G + L N++
Sbjct: 561 DEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIF 620
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
S+ G++++AA +R K G KK+ G SW++I +H F D HP IY+++ I
Sbjct: 621 SAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNIL 680
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+IK++G+ DT+ VL D+EE+ KE+ L +HSEKLAIAFG++S E+ T+ + KNLRVC
Sbjct: 681 IDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCG 740
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+AIK++ + +R I+VRDA RFHHFK G CSC D+W
Sbjct: 741 DCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 63/269 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G +HA + K G+H + NSL++ YAK I+ A +FDE+ +K S+ +LS Y
Sbjct: 324 MGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYV 383
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G+ + A +F +M V P T+ S
Sbjct: 384 QNGKAE-------------------------------EAFLVFKKMQACNVQPDIATMVS 412
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+ L L G+ H V+ GL+ ++ NSL++MYAK G +++ VFD M ++
Sbjct: 413 LIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARD 472
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ S WN+MIAGY +G EA +F +M K
Sbjct: 473 IVS-------------------------------WNTMIAGYGIHGLGKEATTLFLSM-K 500
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQ 299
+ +PD T ++AC++ + GK
Sbjct: 501 NQGFEPDDVTFICLIAACSHSGLVTEGKH 529
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/784 (32%), Positives = 408/784 (52%), Gaps = 111/784 (14%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
Y LL ++ + + VH + K G +F+ SL+N Y + + A+++FD M
Sbjct: 80 MYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGM 139
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P R+ V+WT ++ Y + + +FV
Sbjct: 140 -------------------------------PERNVVTWTALVTGYTLNSQPALGLEVFV 168
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM++ P+ +T+ + L +C A D+ GK+VH + +K G ++ NSL ++YAK+G
Sbjct: 169 EMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLG 228
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
LD A F ++ E++V+TW +MI+ ++
Sbjct: 229 S-------------------------------LDSALRAFWRIPEKNVITWTTMISACAE 257
Query: 255 NGYDFE-ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+ E L +F +ML D + P++FTL S +S C L LGKQ+ A+ + +
Sbjct: 258 DEECVELGLSLFIDMLMDGVM-PNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
PV N+ + YL Y++ G+ A R+F+ +
Sbjct: 317 PVKNSTM----------------------YL-----------YLRKGETDEAMRLFEQME 343
Query: 374 DRDVVAWTAMLVGYEQ--NGLNKD---------AVELFRSMVREGPKPNNYTLSAMLSVS 422
D ++ W AM+ GY Q + D A+ +FR + R KP+ +T S++LSV
Sbjct: 344 DASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVC 403
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
S++ +L+ G+QIHA ++SG S + V++AL+ MY+K G I A + F + R V+W
Sbjct: 404 SAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTW 462
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
TSMI +QHG +EAIQLFE M G++P+ IT+V +L+AC++ GLVE+ + Y++MMK
Sbjct: 463 TSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK 522
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ I+P H+ M+D+ R G +++A++FI+ EP+ W SL++ CR H N++L
Sbjct: 523 EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAF 582
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
AA+KLL ++P Y L N+Y S +W+D A +RK MK V + SW+ I++KV
Sbjct: 583 YAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKV 642
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM--LRHHSEK 720
+ F D HPQ +Y + + ++ K +G+ P + L D E+D K L+HHSE+
Sbjct: 643 YFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSER 702
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+A GL+ TP T+R+ KN+ +C DCHS+IK L +REI+VRD+ R H FK G CS
Sbjct: 703 LAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCS 762
Query: 781 CRDY 784
C D+
Sbjct: 763 CGDF 766
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
+M+ EG + +L + SL + +H ++G + + V+ +L+ Y + G
Sbjct: 68 TMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCG 127
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
ARR+F+ + R V+WT+++ + +++F MLE+G P H T L
Sbjct: 128 AARDARRLFDGMPERN-VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC V+ G++ + + + S S+ L + G L A +P E +
Sbjct: 187 NACLASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKN 244
Query: 582 VVAWGSLLSAC 592
V+ W +++SAC
Sbjct: 245 VITWTTMISAC 255
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 349/594 (58%), Gaps = 37/594 (6%)
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
H D A F + +V WN +I G +N F+A+ + M+ D+ +P+KFT
Sbjct: 79 HFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA--RPNKFTYP 136
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
+ AC+ + ++ G+QIH ++++ + + +A I YA G +E A+K+ SG S
Sbjct: 137 TLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGES 195
Query: 343 YLNVIAFTTLLDGYIKIG-------------------------------DIGPARRIFDS 371
+V+ + T++DGY+K G ++G AR++FD
Sbjct: 196 --DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDE 253
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ +RD ++W++M+ GY G K+A+E+F+ M RE +P + LS++L+ S++ ++D G
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG 313
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ +HA R+ + AL+ MY+K G ++ VF + R E +W +MI LA
Sbjct: 314 RWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAI 372
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
HG E+A++LF ++ E +KP+ IT VGVLTAC H G V++G R + M+ + + P
Sbjct: 373 HGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELE 432
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+ MVDLLGR+GL EA + I +MP++P+ WG+LL ACR+H N DL + + LL +
Sbjct: 433 HYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLEL 492
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
EP NSG Y L N+Y+ G+++D + IRK MK G+K G S V + VH F + D
Sbjct: 493 EPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGS 552
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
HPQ IY K+ I + ++ G PDT+ VL D++E+ KE + +HSEKLAIAFGLI+T
Sbjct: 553 HPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTL 612
Query: 732 ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ I+KNLRVC+DCHSA K I ++ DREI+VRD R+HHFK G CSC+D+W
Sbjct: 613 PGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 231/512 (45%), Gaps = 74/512 (14%)
Query: 84 TILSAYAKQ--GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+L YA D A +VF+ +PN + W +I E + AI + MV D
Sbjct: 70 ALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID-A 128
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG------- 194
P +FT ++ +C+ + G+++H VVK G+ V++ ++ + MYA G
Sbjct: 129 RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARK 188
Query: 195 ------------DEMM-----------AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+ M+ AK +F M +KN+ SWNV+++ G L AR
Sbjct: 189 MFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDAR 248
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M ERD ++W+SM+ GY G EAL +F M ++ + +P +F L+S L+AC+N+
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET-RPGRFILSSVLAACSNI 307
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
+ G+ +HAY+ R +G AL+ YAK G +++ +
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE----------------- 350
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
+F+ +++R++ W AM+ G +G +DA+ELF + KPN
Sbjct: 351 ----------------VFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVF 470
TL +L+ + +D G +I + G L ++ + ++G + A +
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI-TYVGVLTACTHGGL 529
N + + W +++ A HG + A ++ + +LEL +P + YV + G
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLEL--EPQNSGRYVLLSNIYAKVGR 512
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
+ + +MKN IK P S+VDL G
Sbjct: 513 FDDVSKIRKLMKN-RGIKTVPG--VSIVDLNG 541
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 137/259 (52%), Gaps = 32/259 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+L AR + V N++++ Y K + AK +F +MPVK + SWN +++ AK
Sbjct: 181 GRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAK 240
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L A ++F+ M RD +SW++++ Y GR+K A+ +F +M +++ P +F ++SV
Sbjct: 241 GGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSV 300
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
LA+C+ +G + G+ VH+++ + + + +LL+MYAK G M VF+ M+ + +
Sbjct: 301 LAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREI 360
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+W N+MI G + +G +AL +F+ L++
Sbjct: 361 FTW-------------------------------NAMIGGLAIHGRAEDALELFSK-LQE 388
Query: 272 SSLKPDKFTLASTLSACAN 290
+KP+ TL L+ACA+
Sbjct: 389 GRMKPNGITLVGVLTACAH 407
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 153/362 (42%), Gaps = 54/362 (14%)
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
Q+HA ++R+ V AL+ CYA + + F
Sbjct: 51 QLHALVLRSGHFQDHYVSGALLKCYAN----------------PHFSNFDF--------- 85
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
A ++F S+ + +V W ++ G +N A+ + MV + +PN +T +
Sbjct: 86 ------ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTL 138
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
S ++ G+QIH ++ G S + + +A I MY+ G + AR++F +
Sbjct: 139 FKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF--YSGESD 196
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
V W +MI + G+ E A LF +M I ++ ++ GG + ++ ++
Sbjct: 197 VVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNV----MINGLAKGGNLGDARKLFD 252
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVH 595
M +I ++SMVD AG +EA + M E P S+L+AC
Sbjct: 253 EMSERDEIS-----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307
Query: 596 KNLDLGKI--AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
+D G+ A K I+ D + +AL ++Y+ CG+ + + + M K+ + F
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLD-AVLGTALLDMYAKCGRLDMGWEVFEEM-----KEREIF 361
Query: 654 SW 655
+W
Sbjct: 362 TW 363
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 14/225 (6%)
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA--GNINAARRVFNLIHWRQET 479
S S+ SL + Q+HA LRSG VS AL+ Y+ N + A +VF+ I
Sbjct: 40 SKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIP-NPNV 98
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
W +I ++ +AI + RM+ + +P+ TY + AC+ V++G++ +
Sbjct: 99 FIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGH 157
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+ H I ++ + + G L++A + E DVV W +++ L
Sbjct: 158 VVK-HGIGSDVHIKSAGIQMYASFGRLEDARKMFYSG--ESDVVCWNTMIDG-----YLK 209
Query: 600 LGKIAAEKLLLIE--PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
G + A K L + N G+++ + N + G DA + M
Sbjct: 210 CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEM 254
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/691 (36%), Positives = 390/691 (56%), Gaps = 50/691 (7%)
Query: 14 EFYAHLLQSN-----LKSRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
E AHL S+ L+S G + HARI+K + FL N+L++ YA+ + A
Sbjct: 12 ELVAHLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDA 71
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR-- 125
++VFDE+P++ S+N +LSAYA+ GR D A +F +P+ D S+ ++ GR
Sbjct: 72 RRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGH 131
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
+A+R M D + ++ S L++C A D G++VH V ++ + V++ ++
Sbjct: 132 AADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSA 191
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYAK R + AR FD M ER+VV+W
Sbjct: 192 LVDMYAKCE-------------------------------RPEDARRVFDAMPERNVVSW 220
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
NS+I Y QNG EAL +F M+ + PD+ TL+S +SACA L + G+Q+HA+++
Sbjct: 221 NSLITCYEQNGPVGEALMLFVEMMA-AGFSPDEVTLSSVMSACAGLAADREGRQVHAHMV 279
Query: 306 RTE-FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+ + + NAL+ YAK G A+ I + + ++++ T++L GY K ++
Sbjct: 280 KCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDS--MPSRSIVSETSILTGYAKSANVED 337
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A+ +F + +++V+AW ++ Y QNG ++A+ LF + R+ P +YT +L+ +
Sbjct: 338 AQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 397
Query: 425 LASLDHGKQIHASALRSG------EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
+A L G+Q H L+ G S + V N+L+ MY K G+I+ +VF + R +
Sbjct: 398 IADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-D 456
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSW +MIV AQ+G ++A+ LFERML PD +T +GVL+AC H GLV++G+RY++
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFH 516
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M H I P+ H+ MVDLLGRAG L+EA I +MP+EPD V W SLL ACR+HKN+
Sbjct: 517 SMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNV 576
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+LG+ A +L ++P NSG Y L N+Y+ GKW + +R+SMK GV K G SW++I
Sbjct: 577 ELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEI 636
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
K++VF D HP R+ I+N + I E+
Sbjct: 637 GRKMNVFLARDKRHPCRNEIHNTLRIIQMEM 667
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/547 (41%), Positives = 353/547 (64%), Gaps = 5/547 (0%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQ 299
++ +N+++ +SQ+ + F N L ++ PD++T S L ACA L ++ G++
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H ++ + ++ V N+L+ Y KVG IAQK+ ++ + +V+++ TL+ GY
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR--DVVSWNTLISGYCFS 206
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAM 418
G + AR +FD + ++++V+W+ M+ GY +N DA+ELFR M EG PN+ TL ++
Sbjct: 207 GMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSV 266
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
LS + L +LD GK IH R+ L + NAL MY+K G + A+ VF+ +H R +
Sbjct: 267 LSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER-D 325
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+SW+ +I+ LA +G EA F M+E G++P+ I+++G+LTACTH GLV++G Y++
Sbjct: 326 VISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFD 385
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
MM V+ I P H+ +VDLL RAG L +A + I +MP++P+V+ WG+LL CR++K+
Sbjct: 386 MMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDA 445
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+ G+ ++L ++ ++SG+ L N+Y+S G+ +DAA+ R M+ KT G SW++I
Sbjct: 446 ERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEI 505
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
N V+ F + D HPQ IY+ + ++ ++K G+ P T V+H+++E+ KE L HS
Sbjct: 506 NNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHS 565
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLA+AFGLI+T E TT+RI+KNLRVCNDCH AIK I K+V+REIVVRD +RFHHFK G
Sbjct: 566 EKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGK 625
Query: 779 CSCRDYW 785
CSC DYW
Sbjct: 626 CSCNDYW 632
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 188/367 (51%), Gaps = 34/367 (9%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++T TSVL +C L + G+KVH FV K G + V NSL+++Y KVG +A+ +
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M +++V SWN ++S + SG +D AR FD M+E+++V+W++MI+GY++N +A+
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAI 244
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + L P+ TL S LSACA+L L LGK IH +I R + + +GNAL
Sbjct: 245 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADM 304
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G V A+ +F + +RDV++W+
Sbjct: 305 YAKCGCVL---------------------------------EAKGVFHEMHERDVISWSI 331
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-S 441
+++G G +A F M+ +G +PN+ + +L+ + +D G + +
Sbjct: 332 IIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVY 391
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + ++ + S+AG ++ A + N + + + W +++ + E ++
Sbjct: 392 GITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERV 451
Query: 502 FERMLEL 508
R+LEL
Sbjct: 452 VWRILEL 458
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 177/361 (49%), Gaps = 51/361 (14%)
Query: 4 PNPPSLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PN P+ P E+ + +L++ G+ VH + K G ++F++NSL++ Y K
Sbjct: 120 PNAPN---PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVG 176
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
A+K+FDEM V+ + SWNT++S Y G +D A VF+ M ++ VSW+T+I Y
Sbjct: 177 CNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYAR 236
Query: 123 IGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
++ +AI +F +M + L P T+ SVL++C LG L GK +H F+ + + +
Sbjct: 237 NEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLF 296
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ N+L +MYAK G + AK VF M ++V SW+++
Sbjct: 297 LGNALADMYAKCGCVLEAKGVFHEMHERDVISWSII------------------------ 332
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN-------LEKL 294
I G + GY EA FA M++D L+P+ + L+AC + LE
Sbjct: 333 -------IMGLAMYGYANEAFNFFAEMIED-GLEPNDISFMGLLTACTHAGLVDKGLEYF 384
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
+ Q+ Y I + + G V + L ++ G ++ A+ ++ + NVI + LL
Sbjct: 385 DMMPQV--YGITPKIEHYGCVVDLL----SRAGRLDQAESLINSMPMQ-PNVIVWGALLG 437
Query: 355 G 355
G
Sbjct: 438 G 438
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 27/290 (9%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
QI AS + S + + ++V I + S GN+ + +FN ++ +++ A +QH
Sbjct: 46 QIIASPIPSIDPNIIAVK--FIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQH 103
Query: 493 GLGEEAIQLFERMLEL--GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
I F L L PD T+ VL AC V +GQ+ + V K
Sbjct: 104 NAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCF---VTKYGCES 160
Query: 551 SHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
+ F S+VDL + G A + M + DVV+W +L+S +D ++ + +
Sbjct: 161 NLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR-DVVSWNTLISGYCFSGMVDKARMVFDGM 219
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+ N ++S + + Y+ K+ DA + + M++ G + V + + G
Sbjct: 220 M---EKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGAL 276
Query: 669 D---WLHP--QRDAIY------NKMAKIWDEIKEMGFVPDTASVLHDVEE 707
D W+H +R+ I N +A ++ + G V + V H++ E
Sbjct: 277 DLGKWIHRFIRRNKIEVGLFLGNALADMY---AKCGCVLEAKGVFHEMHE 323
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/650 (37%), Positives = 375/650 (57%), Gaps = 55/650 (8%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT-----------NSLLNMYAKV-GD 195
VT L TA +S K + SFV L NV N++L+ Y KV G
Sbjct: 61 VTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGK 120
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +FD + + S+N+++ ++ S + A A F++M +D+ +WN++I+G++QN
Sbjct: 121 VKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQN 180
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +A +F+ M P+K G
Sbjct: 181 GQMQKAFDLFSVM-------PEK---------------------------------NGVS 200
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+A+IS Y + G +E A+++ + G+ +V+ T +L GY+K G + A RIF + +
Sbjct: 201 WSAMISGYVEHGDLEAAEELYKNVGMK--SVVVETAMLTGYMKFGKVELAERIFQRMAVK 258
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
++V W +M+ GY +N +D +++F++M+ +PN +LS++L S+L++L G+Q+H
Sbjct: 259 NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMH 318
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+S + + +LI+MY K G++++A ++F L R++ ++W +MI AQHG G
Sbjct: 319 QLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF-LEMPRKDVITWNAMISGYAQHGAG 377
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A+ LF++M +KPD IT+V V+ AC H G V+ G +Y+ MK I+ P H+
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTC 437
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
++DLLGRAG L EA + I+ MP P +G+LL ACR+HKNLDL + AA LL ++P +
Sbjct: 438 VIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTS 497
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+ Y L N+Y++ KW+ A +RK MK V K G+SW++I++ H F D LHP+
Sbjct: 498 ATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPEL 557
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+I+ K+ ++ ++K G+VPD LHDVEE+ KE++L HSEKLAIAFGL+ T T
Sbjct: 558 TSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTP 617
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCH AIKFI + REI+VRD TRFHHF+ G CSC DYW
Sbjct: 618 IRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 177/373 (47%), Gaps = 54/373 (14%)
Query: 52 NSLMNFYAKTES-ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N++++ Y K + A ++FD++P S+N +L Y + + A FN MP +D
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDI 167
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV--TSVLASCTALGDLSAGKKVH 168
SW T+I + + G+ + A +F V+P + V +++++ GDL A ++++
Sbjct: 168 ASWNTLISGFAQNGQMQKAFDLF------SVMPEKNGVSWSAMISGYVEHGDLEAAEELY 221
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
V G+ V V ++L Y K G +A+ +F M +KN+ +WN
Sbjct: 222 KNV---GMKSVV-VETAMLTGYMKFGKVELAERIFQRMAVKNLVTWN------------- 264
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
SMIAGY +N + L +F M+ +S ++P+ +L+S L C
Sbjct: 265 ------------------SMIAGYVENCRAEDGLKVFKTMI-ESRVRPNPLSLSSVLLGC 305
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
+NL L LG+Q+H + ++ +LIS Y K G ++ A K+ + + +VI
Sbjct: 306 SNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLE--MPRKDVIT 363
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRD----RDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+ ++ GY + G A +FD +R+ D + + A+++ G V+ F+SM
Sbjct: 364 WNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMK 423
Query: 405 RE---GPKPNNYT 414
+E KP +YT
Sbjct: 424 KEFGIEAKPVHYT 436
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP SL S L L SNL + +G+ +H + K L SL++ Y K
Sbjct: 293 PNPLSLSSVL-----LGCSNLSALP--LGRQMHQLVSKSPLSKDTTACTSLISMYCKCGD 345
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN----RDSVSWTTIIVT 119
+ A K+F EMP K + +WN ++S YA+ G A +F+ M N D +++ +I+
Sbjct: 346 LDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILA 405
Query: 120 YNEIGRFKNAIRMFVEMVQD---QVLPTQFT 147
N G ++ F M ++ + P +T
Sbjct: 406 CNHAGFVDLGVQYFKSMKKEFGIEAKPVHYT 436
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 349/594 (58%), Gaps = 37/594 (6%)
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
H D A F + +V WN +I G +N F+A+ + M+ D+ +P+KFT
Sbjct: 79 HFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA--RPNKFTYP 136
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
+ AC+ + ++ G+QIH ++++ + + +A I YA G +E A+K+ SG S
Sbjct: 137 TLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGES 195
Query: 343 YLNVIAFTTLLDGYIKIG-------------------------------DIGPARRIFDS 371
+V+ + T++DGY+K G ++G AR++FD
Sbjct: 196 --DVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDE 253
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ +RD ++W++M+ GY G K+A+E+F+ M RE +P + LS++L+ S++ ++D G
Sbjct: 254 MSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG 313
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ +HA R+ + AL+ MY+K G ++ VF + R E +W +MI LA
Sbjct: 314 RWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAI 372
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
HG E+A++LF ++ E +KP+ IT VGVLTAC H G V++G R + M+ + + P
Sbjct: 373 HGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELE 432
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+ MVDLLGR+GL EA + I +MP++P+ WG+LL ACR+H N DL + + LL +
Sbjct: 433 HYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLEL 492
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
EP NSG Y L N+Y+ G+++D + IRK MK G+K G S V + VH F + D
Sbjct: 493 EPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGS 552
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
HPQ IY K+ I + ++ G PDT+ VL D++E+ KE + +HSEKLAIAFGLI+T
Sbjct: 553 HPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTL 612
Query: 732 ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ I+KNLRVC+DCHSA K I ++ DREI+VRD R+HHFK G CSC+D+W
Sbjct: 613 PGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 232/512 (45%), Gaps = 74/512 (14%)
Query: 84 TILSAYAKQ--GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+L YA D A +VF+ +PN + W +I E + AI + MV D
Sbjct: 70 ALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID-A 128
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG------- 194
P +FT ++ +C+ + G+++H VVK G+ V++ ++ ++MYA G
Sbjct: 129 RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARK 188
Query: 195 ------------DEMM-----------AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+ M+ AK +F M +KN+ SWNV+++ G L AR
Sbjct: 189 MFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDAR 248
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M ERD ++W+SM+ GY G EAL +F M ++ + +P +F L+S L+AC+N+
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET-RPGRFILSSVLAACSNI 307
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
+ G+ +HAY+ R +G AL+ YAK G +++ +
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE----------------- 350
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
+F+ +++R++ W AM+ G +G +DA+ELF + KPN
Sbjct: 351 ----------------VFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVF 470
TL +L+ + +D G +I + G L ++ + ++G + A +
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI-TYVGVLTACTHGGL 529
N + + W +++ A HG + A ++ + +LEL +P + YV + G
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLEL--EPQNSGRYVLLSNIYAKVGR 512
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
+ + +MK+ IK P S+VDL G
Sbjct: 513 FDDVSKIRKLMKD-RGIKTVPG--VSIVDLNG 541
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 137/259 (52%), Gaps = 32/259 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+L AR + V N++++ Y K + AK +F +MPVK + SWN +++ AK
Sbjct: 181 GRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAK 240
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L A ++F+ M RD +SW++++ Y GR+K A+ +F +M +++ P +F ++SV
Sbjct: 241 GGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSV 300
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
LA+C+ +G + G+ VH+++ + + + +LL+MYAK G M VF+ M+ + +
Sbjct: 301 LAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREI 360
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+W N+MI G + +G +AL +F+ L++
Sbjct: 361 FTW-------------------------------NAMIGGLAIHGRAEDALELFSK-LQE 388
Query: 272 SSLKPDKFTLASTLSACAN 290
+KP+ TL L+ACA+
Sbjct: 389 GRMKPNGITLVGVLTACAH 407
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 152/362 (41%), Gaps = 54/362 (14%)
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
Q+H ++R+ V AL+ CYA + + F
Sbjct: 51 QLHGLVLRSGHFQDHYVSGALLKCYAN----------------PHFSNFDF--------- 85
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
A ++F S+ + +V W ++ G +N A+ + MV + +PN +T +
Sbjct: 86 ------ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTL 138
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
S ++ G+QIH ++ G S + + +A I MY+ G + AR++F +
Sbjct: 139 FKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF--YSGESD 196
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
V W +MI + G+ E A LF +M I ++ ++ GG + ++ ++
Sbjct: 197 VVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNV----MINGLAKGGNLGDARKLFD 252
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVH 595
M +I ++SMVD AG +EA + M E P S+L+AC
Sbjct: 253 EMSERDEIS-----WSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307
Query: 596 KNLDLGKI--AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
+D G+ A K I+ D + +AL ++Y+ CG+ + + + M K+ + F
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLD-AVLGTALLDMYAKCGRLDMGWEVFEEM-----KEREIF 361
Query: 654 SW 655
+W
Sbjct: 362 TW 363
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 14/225 (6%)
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA--GNINAARRVFNLIHWRQET 479
S S+ SL + Q+H LRSG VS AL+ Y+ N + A +VF+ I
Sbjct: 40 SKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIP-NPNV 98
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
W +I ++ +AI + RM+ + +P+ TY + AC+ V++G++ +
Sbjct: 99 FIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGH 157
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+ H I ++ + + G L++A + E DVV W +++ L
Sbjct: 158 VVK-HGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG--ESDVVCWNTMIDG-----YLK 209
Query: 600 LGKIAAEKLLLIE--PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
G + A K L + N G+++ + N + G DA + M
Sbjct: 210 CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEM 254
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/713 (35%), Positives = 384/713 (53%), Gaps = 75/713 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G+L +A EVF+ MP R+ VSWT ++V + G + +R+F EM
Sbjct: 43 NNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTS 102
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT+++ L +C G AG ++H V+TG G V NSL+ MY+K
Sbjct: 103 PNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK---------- 150
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
W AR FD + R++ TWNSMI+GY+ G ++L
Sbjct: 151 ---------GRWT------------GDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSL 189
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + +PD+FT AS L AC+ L + G Q+HA + P NA+++
Sbjct: 190 LVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMA---VRGVSPASNAILA- 245
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
LLD Y+K + A ++FD L R+ + WT
Sbjct: 246 ---------------------------GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTT 278
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++VG+ Q G K+A+ LFR G + + + LS++++V + A ++ GKQ+H ++
Sbjct: 279 VIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP 338
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+SV+N+L+ MY K G A R F + R VSWT+MI + +HG G EAI LF
Sbjct: 339 AGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN-VVSWTAMINGVGKHGHGREAIDLF 397
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M G++ D + Y+ +L+AC+H GLV++ +RY++ + +++P H+A MVDLLGR
Sbjct: 398 EEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGR 457
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA I +MP+EP V W +LLSACRVHK++ +G+ + LL ++ DN Y L
Sbjct: 458 AGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVML 517
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNK 681
N+ + G+W + IR +M+ G++K G SW ++ +VH F G D HPQ I
Sbjct: 518 SNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRA 577
Query: 682 MAKIWDEIKE-MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT------ 734
+ ++ ++E +G+ D LHDV+E+ + + LR HSE+LA+ L+
Sbjct: 578 LREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGG 637
Query: 735 --TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCH +K + +V R +VVRDA RFH F+ G CSCRDYW
Sbjct: 638 GEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 690
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 202/490 (41%), Gaps = 103/490 (21%)
Query: 8 SLISPLEFYAHLLQSNLKS--RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
S SP EF L + LK+ G +H ++ G + NSL+ Y+K
Sbjct: 99 SGTSPNEF---TLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTG 155
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A++VFD +P + L +WN+++S YA G+ RDS ++ + E+ R
Sbjct: 156 DARRVFDVIPSRNLATWNSMISGYAHAGQ------------GRDS------LLVFREMQR 197
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VT 183
+ P +FT S+L +C+ LG G +VH+ + G+S N +
Sbjct: 198 RHDE------------QPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 245
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+LL++Y K +A VFDG+ +N W V
Sbjct: 246 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTV-------------------------- 279
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
I G++Q G EA+ +F S ++ D L+S ++ A+ ++ GKQ+H Y
Sbjct: 280 -----IVGHAQEGQVKEAMCLFRRFWS-SGVRADGHVLSSVVAVFADFALVEQGKQVHCY 333
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+T P G L+V +L+D Y+K G G
Sbjct: 334 TAKT------PAG---------------------------LDVSVANSLVDMYLKCGLTG 360
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A R F + R+VV+WTAM+ G ++G ++A++LF M EG + + A+LS S
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 420
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSW 482
+D ++ + + + A ++ + +AG + A+ + + W
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480
Query: 483 TSMIVALAQH 492
+++ A H
Sbjct: 481 QTLLSACRVH 490
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 46/303 (15%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
+A L A A L+ G Q+HA +++ F + + N LI YAK G + +A ++ + G
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD--G 64
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+ NV+++T L+ G++ +G ++ + LF
Sbjct: 65 MPERNVVSWTALMVGFL-------------------------------HHGEARECLRLF 93
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M G PN +TLSA L G QIH +R+G V+N+L+ MYSK
Sbjct: 94 GEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKG 151
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVG 519
ARRVF++I R +W SMI A G G +++ +F M +PD T+
Sbjct: 152 RWTGDARRVFDVIPSRN-LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 210
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
+L AC+ G +G + + M V + P + AG L + Y +P+
Sbjct: 211 LLKACSGLGAAREGAQVHAAMA-VRGVSPASNAIL--------AGALLDVYVKCHRLPVA 261
Query: 580 PDV 582
V
Sbjct: 262 MQV 264
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
++ +L S+ +SL G Q+HA+ ++ G S ++N LI MY+K G ++ A VF+ +
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC---------T 525
R VSWT+++V HG E ++LF M G P+ T L AC
Sbjct: 67 ERN-VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQI 125
Query: 526 HGGLVEQG-----------------QRYYNMMKNVHKIKPTP--SHFASMVDLLGRAGLL 566
HG V G R+ + V + P+ + + SM+ AG
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 185
Query: 567 QEAYNFIENMPL----EPDVVAWGSLLSAC 592
+++ M +PD + SLL AC
Sbjct: 186 RDSLLVFREMQRRHDEQPDEFTFASLLKAC 215
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 44/245 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH K L V + NSL++ Y K A + F EMP + + SW +++ K
Sbjct: 327 GKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGK 386
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL----- 142
G A ++F M D V++ ++ + G R F + QD+ +
Sbjct: 387 HGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAE 446
Query: 143 ----------------------------PTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
PT ++L++C D++ G++V ++
Sbjct: 447 HYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAV 506
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV-----SSWNVV-VSLHIHSGRLD 228
VN L N+ A+ G+ + + MR K + SW V +H G D
Sbjct: 507 DGDNPVNYV-MLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGD 565
Query: 229 LARAQ 233
A Q
Sbjct: 566 DAHPQ 570
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/578 (40%), Positives = 348/578 (60%), Gaps = 11/578 (1%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N V+ + G + + F Q E ++ +N+MI G N E++ ++ +M K+ L
Sbjct: 46 NKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEG-L 104
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
PD FT L ACA L KLG ++H +++ ++ V +L+S Y K G ++ A K
Sbjct: 105 SPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFK 164
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPA----RR---IFDSLRDRDVVAWTAMLVGY 387
+ + I NV A+T ++ GYI +G A RR +FD + ++D+V+W++M+ GY
Sbjct: 165 VFDD--IPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGY 222
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
NGL K+A++LF M+ EG +P+ Y + +L + L +L+ G R+ +
Sbjct: 223 ASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNP 282
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ ALI MY+K G +++A VF + +++ V W + I LA G + A LF +M +
Sbjct: 283 VLGTALIDMYAKCGRMDSAWEVFRGMR-KKDIVVWNAAISGLAMSGHVKAAFGLFGQMEK 341
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI+PD T+VG+L ACTH GLV++G++Y+N M+ V + P H+ MVDLLGRAG L
Sbjct: 342 SGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLD 401
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA+ +++MP+E + + WG+LL CR+H++ L + ++L+ +EP NSG Y L N+YS
Sbjct: 402 EAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYS 461
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ KWEDAA IR M G+KK G+SW+++ VH F V D HP + IY K+ ++
Sbjct: 462 ASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVK 521
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++K G+VP T VL D+EE+ KE + HSEKLAIAFGLIST N +R++KNLRVC D
Sbjct: 522 DLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGD 581
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH AIK I + REI+VRD RFH F G CSC+DYW
Sbjct: 582 CHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 205/468 (43%), Gaps = 73/468 (15%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VHA +++ GL +L N ++ F + +Y+ ++F + + +NT++
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGL--- 83
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
V N DS F+ +I ++ M ++ + P FT +L
Sbjct: 84 --------VLN-----DS---------------FQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C L D G K+H VVK G V SL+++Y K G A VFD + KNV+
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVA 175
Query: 213 SWNVVVSLHIHSGR----LDLAR---AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+W ++S +I G+ +D+ R + FD M+E+D+V+W+SMI GY+ NG EAL +F
Sbjct: 176 AWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLF 235
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
ML + +PD + + L ACA L L+LG + R EF +G ALI YAK
Sbjct: 236 FKMLNE-GFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAK 294
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G ++ A +F +R +D+V W A +
Sbjct: 295 CGRMD---------------------------------SAWEVFRGMRKKDIVVWNAAIS 321
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
G +G K A LF M + G +P+ T +L + +D G+Q S R +
Sbjct: 322 GLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLT 381
Query: 446 -SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG ++ A ++ + + W +++ H
Sbjct: 382 PEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLH 429
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 138/289 (47%), Gaps = 20/289 (6%)
Query: 2 ETPNPPSLISP--LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
E +P S P L+ A LL S L G +H ++K G F+ SL++ Y
Sbjct: 102 EGLSPDSFTFPFLLKACARLLDSKL-------GIKLHGLVVKAGCESDAFVNTSLVSLYG 154
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR----LDL---ACEVFNLMPNRDSVS 112
K I A KVFD++P K + +W I+S Y G+ +D+ AC VF+ M +D VS
Sbjct: 155 KCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVS 214
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W+++I Y G K A+ +F +M+ + P + + VL +C LG L G + +
Sbjct: 215 WSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMD 274
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
+ G + +L++MYAK G A VF GMR K++ WN +S SG + A
Sbjct: 275 RNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFG 334
Query: 233 QFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
F QM IE D T+ ++ + G E F +M + +L P+
Sbjct: 335 LFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPE 383
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE--TVSWTS 484
SL H K +HA+ LR G + N ++ GN N + R+F H +E + +
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIF---HQTKEPNIFLFNT 78
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI L + +E+I+++ M + G+ PD T+ +L AC + G + + + V
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGL---VV 135
Query: 545 KIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
K F S+V L G+ G + A+ +++P E +V AW +++S
Sbjct: 136 KAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISG 183
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/593 (38%), Positives = 349/593 (58%), Gaps = 36/593 (6%)
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
VG A+ G+ + + + N++++L+ GR D AR FD M R +V+WN+MIAGY
Sbjct: 75 VGKSCHGLAIHFGL-VTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGY 133
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+ +G D +AL +F+ M ++ + +FTL+ST+ ACA + KQ+H ++ D+
Sbjct: 134 THSGEDVQALKLFSRMHREGT-HMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSN 192
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
VG T +LD Y K I A +F+ +
Sbjct: 193 SFVG---------------------------------TAILDVYAKCNMIKDACWVFEKM 219
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+R +V W+++ GY QNGL+++A+ LFR REG + +TLSA+LS +SLA G
Sbjct: 220 PERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGI 279
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
Q+HA L+ G + V+ +L+ +Y++ G I A +F + + V W +MI + ++H
Sbjct: 280 QLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYME-HKNVVIWNAMIASFSRH 338
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
EA+ LFE+M +LGI P+ +TY+ VL+ C+H GLVE+G+ Y++++ + ++P H
Sbjct: 339 AHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLH 398
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
++ MVD+LGR+G EA+ + MP EP WGSLL +CR + N+ L +IAAE+L +E
Sbjct: 399 YSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLE 458
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
PDN G + L N+Y++ G WE+ RK +K G KK G SW++ + KVHVF V + H
Sbjct: 459 PDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKH 518
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
P+ IYNK+ +I+ E+++ LHDV + KE++L+HHSEKLA++FGLIS P
Sbjct: 519 PRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPS 578
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
N + I KNLR+C DCHS +K + +R ++VRD RFHHFK G CSC D+W
Sbjct: 579 NIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 187/406 (46%), Gaps = 68/406 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K GR D A VF++M R VSW T+I Y G A+++F M ++
Sbjct: 96 NILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTH 155
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
++FT++S + +C A ++ K++H+ +K L V ++L++YAK M+ A
Sbjct: 156 MSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCN--MIKDAC 213
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+ F++M ER +VTW+S+ AGY QNG EAL
Sbjct: 214 W-----------------------------VFEKMPERTLVTWSSLFAGYVQNGLHEEAL 244
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ++ ++ +FTL++ LSACA+L G Q+HA I++ F V +L+
Sbjct: 245 HLFRCAQRE-GVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G +E A +F + ++VV W A
Sbjct: 304 YARCGQIE---------------------------------KAYALFAYMEHKNVVIWNA 330
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL--R 440
M+ + ++ + +A+ LF M + G PN T ++LSV S ++ G+ + + R
Sbjct: 331 MIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDR 390
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ E + L S ++ + ++G + A + N + + W S++
Sbjct: 391 TVEPNVLHYS-CMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLL 435
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 38/268 (14%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT-----ILSAYAK 91
+R+ + G H+S F +S + A +I+ K++ + +K N+ IL YAK
Sbjct: 147 SRMHREGTHMSEFTLSSTICACAAKYAINECKQL-HTIALKLALDSNSFVGTAILDVYAK 205
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ AC VF MP R V+W+++ Y + G + A+ +F ++ V T+FT++++
Sbjct: 206 CNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAI 265
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C +L G ++H+ ++K G G V SL+++YA+ G A A+F M KNV
Sbjct: 266 LSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNV 325
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
V WN+MIA +S++ + +EA+ +F M +
Sbjct: 326 -------------------------------VIWNAMIASFSRHAHSWEAMILFEKM-QQ 353
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQ 299
+ P++ T S LS C++ ++ G+
Sbjct: 354 LGIFPNEVTYLSVLSVCSHAGLVEKGRH 381
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+S L + + SL GK H A+ G + N LI +Y+K G + AR VF+++H
Sbjct: 60 ISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMH 119
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R VSW +MI G +A++LF RM G T + AC + + +
Sbjct: 120 VRS-IVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECK 178
Query: 535 RYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + + K+ + F +++D+ + ++++A E MP E +V W SL +
Sbjct: 179 QLHTIAL---KLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSSLFAG 233
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 35/250 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA I+KCG H + F+ SL++ YA+ I A +F M K + WN +++++++
Sbjct: 278 GIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSR 337
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
SW +I +F +M Q + P + T SV
Sbjct: 338 HAH-----------------SWEAMI--------------LFEKMQQLGIFPNEVTYLSV 366
Query: 152 LASCTALGDLSAGKKVHSFVVK-TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L+ C+ G + G+ S ++ + V + ++++ + G A + + M +
Sbjct: 367 LSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEP 426
Query: 211 VSS-WNVVVSLHIHSGRLDLARAQFDQM--IERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+S W ++ + + LAR +Q+ +E D + +++ ++E + M
Sbjct: 427 TASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARK 486
Query: 268 MLKDSSLKPD 277
LKDS K +
Sbjct: 487 YLKDSGAKKE 496
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/712 (33%), Positives = 390/712 (54%), Gaps = 70/712 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
L + N ++ Y K +A +VF+ MP R+ VSWT ++ + G ++ +F EM +
Sbjct: 404 LITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGR 463
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P +FT ++ L +C L L G ++H F +K G V V NSL++MY+K G
Sbjct: 464 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG---- 519
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
R++ A F M+ R +++WN+MIAGY GY
Sbjct: 520 ---------------------------RINEAEKVFRWMVGRSLISWNAMIAGYVHAGYG 552
Query: 259 FEALGMFANMLKDSSLK--PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
AL F M++++ +K PD+FTL S L AC++ + GKQIH +++R+ F
Sbjct: 553 SRALATFG-MMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS-- 609
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
A + G +L+D Y+K G++ AR+ FD ++++
Sbjct: 610 -------ATITG----------------------SLVDLYVKCGNLFSARKAFDQIKEKT 640
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+++W+++++GY Q G +A+ LF+ + + +++ LS+++ V + A L GKQ+ A
Sbjct: 641 MISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQA 700
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
++ SVSN+L+ MY K G ++ A + F + + + +SWT MI +HGLG+
Sbjct: 701 LVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVMITGYGKHGLGK 759
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
+A+ +F +ML I+PD + Y+ VL+AC+H G++++G+ ++ + IKP H+A +
Sbjct: 760 KAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACV 819
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLLGRAG L+EA + ++ MP++P+V W +LLS CRVH +++LGK + LL I+ N
Sbjct: 820 VDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNP 879
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
Y + NLY G W + N R+ G++K G SWV+I+ +VH F + HP
Sbjct: 880 ANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTL 939
Query: 677 AIYNKMAKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT- 734
I + ++ ++ E+G+V LHD++++ KE+ LR HSEKLAI L + N
Sbjct: 940 VIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQK 999
Query: 735 --TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
T+R+ KNLRVC DCH IK + K+ VVRDA RFH F+ G CSC DY
Sbjct: 1000 GKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 206/415 (49%), Gaps = 51/415 (12%)
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
N+ + N ++ ++ +A FD M ER+VV+W ++++G+ NG +L +F M
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + P++FT ++ L AC L L+ G QIH + ++ F+ VGN+L+ Y+K
Sbjct: 463 R-QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC--- 518
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
G I A ++F + R +++W AM+ GY
Sbjct: 519 ------------------------------GRINEAEKVFRWMVGRSLISWNAMIAGYVH 548
Query: 390 NGLNKDAVELFRSMVREG---PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE--A 444
G A+ F M++E +P+ +TL+++L SS + GKQIH +RSG
Sbjct: 549 AGYGSRALATF-GMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 607
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
SS +++ +L+ +Y K GN+ +AR+ F+ I + +SW+S+I+ AQ G EA+ LF+R
Sbjct: 608 SSATITGSLVDLYVKCGNLFSARKAFDQIK-EKTMISWSSLILGYAQEGDFVEAMGLFKR 666
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
+ EL + D ++ L++QG++ ++ + T S S+VD+ + G
Sbjct: 667 LQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLET-SVSNSLVDMYLKCG 725
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE---KLLL--IEPD 614
L+ EA M L+ DV++W +++ H LGK A K+L IEPD
Sbjct: 726 LVDEAEKCFAEMQLK-DVISWTVMITGYGKH---GLGKKAVSIFNKMLRHNIEPD 776
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 213/480 (44%), Gaps = 100/480 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H +K G + V + NSL++ Y+K I+ A+KVF M ++L SWN +++ Y
Sbjct: 489 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVH 548
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A F +M + + + P +FT+TS+
Sbjct: 549 AGYGSRALATFGMM-----------------------------QEAKIKERPDEFTLTSL 579
Query: 152 LASCTALGDLSAGKKVHSFVVKTGL--SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
L +C++ G + AGK++H F+V++G +T SL+++Y K G+ A+ FD
Sbjct: 580 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFD----- 634
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
Q+ E+ +++W+S+I GY+Q G EA+G+F L
Sbjct: 635 --------------------------QIKEKTMISWSSLILGYAQEGDFVEAMGLFKR-L 667
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++ S + D F L+S + A+ L+ GKQ+ A +++ V N+L+ Y K G V
Sbjct: 668 QELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLV 727
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ A+K + + +VI++T ++ GY K
Sbjct: 728 DEAEKCFAEMQLK--DVISWTVMITGYGK------------------------------- 754
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLS 448
+GL K AV +F M+R +P+ A+LS S + G+++ + L + G +
Sbjct: 755 HGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVE 814
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
++ + +AG + A+ + + + + W +++ HG LG+E ++ R+
Sbjct: 815 HYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 874
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 132/251 (52%), Gaps = 5/251 (1%)
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
S LN+I L+D Y K + A ++FDS+ +R+VV+WTA++ G+ NG ++ LF
Sbjct: 400 SGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFT 459
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M R+G PN +T S L L +L+ G QIH L+ G + V N+L+ MYSK G
Sbjct: 460 EMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 519
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK--PDHITYVG 519
IN A +VF + R +SW +MI G G A+ F M E IK PD T
Sbjct: 520 RINEAEKVFRWMVGRS-LISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTS 578
Query: 520 VLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
+L AC+ G++ G++ + ++++ + + S+VDL + G L A + +
Sbjct: 579 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK- 637
Query: 579 EPDVVAWGSLL 589
E +++W SL+
Sbjct: 638 EKTMISWSSLI 648
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
SG +L SN LI MY K A +VF+ + R VSWT+++ +G ++
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERN-VVSWTALMSGHVLNGDLNGSLS 456
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF M GI P+ T+ L AC +E+G + + + + S+VD+
Sbjct: 457 LFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKI-GFEMMVEVGNSLVDMY 515
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ G + EA M + +++W ++++
Sbjct: 516 SKCGRINEAEKVFRWM-VGRSLISWNAMIAG 545
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/713 (35%), Positives = 384/713 (53%), Gaps = 75/713 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G+L +A EVF+ MP R+ VSWT ++V + G + +R+F EM
Sbjct: 239 NNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTS 298
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT+++ L +C G AG ++H V+TG G V NSL+ MY+K
Sbjct: 299 PNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSK---------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
W AR FD + R++ TWNSMI+GY+ G ++L
Sbjct: 347 ---------GRWT------------GDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSL 385
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + +PD+FT AS L AC+ L + G Q+HA +
Sbjct: 386 LVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAM------------------ 427
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
V GV A N I LLD Y+K + A ++FD L R+ + WT
Sbjct: 428 --AVRGVSPAS-----------NAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTT 474
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++VG+ Q G K+A+ LFR G + + + LS++++V + A ++ GKQ+H ++
Sbjct: 475 VIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP 534
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+SV+N+L+ MY K G A R F + R VSWT+MI + +HG G EAI LF
Sbjct: 535 AGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARN-VVSWTAMINGVGKHGHGREAIDLF 593
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M G++ D + Y+ +L+AC+H GLV++ +RY++ + +++P H+A MVDLLGR
Sbjct: 594 EEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGR 653
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L+EA I +MP+EP V W +LLSACRVHK++ +G+ + LL ++ DN Y L
Sbjct: 654 AGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVML 713
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF-GVEDWLHPQRDAIYNK 681
N+ + G+W + IR +M+ G++K G SW ++ +VH F G D HPQ I
Sbjct: 714 SNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRA 773
Query: 682 MAKIWDEIKE-MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT------ 734
+ ++ ++E +G+ D LHDV+E+ + + LR HSE+LA+ L+
Sbjct: 774 LREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGG 833
Query: 735 --TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KNLRVC DCH +K + +V R +VVRDA RFH F+ G CSCRDYW
Sbjct: 834 GEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 886
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 202/490 (41%), Gaps = 103/490 (21%)
Query: 8 SLISPLEFYAHLLQSNLKS--RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
S SP EF L + LK+ G +H ++ G + NSL+ Y+K
Sbjct: 295 SGTSPNEF---TLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTG 351
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A++VFD +P + L +WN+++S YA G+ RDS ++ + E+ R
Sbjct: 352 DARRVFDVIPSRNLATWNSMISGYAHAGQ------------GRDS------LLVFREMQR 393
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VT 183
+ P +FT S+L +C+ LG G +VH+ + G+S N +
Sbjct: 394 RHDE------------QPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 441
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+LL++Y K +A VFDG+ +N W V
Sbjct: 442 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTV-------------------------- 475
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
I G++Q G EA+ +F S ++ D L+S ++ A+ ++ GKQ+H Y
Sbjct: 476 -----IVGHAQEGQVKEAMCLFRRFWS-SGVRADGHVLSSVVAVFADFALVEQGKQVHCY 529
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+T P G L+V +L+D Y+K G G
Sbjct: 530 TAKT------PAG---------------------------LDVSVANSLVDMYLKCGLTG 556
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A R F + R+VV+WTAM+ G ++G ++A++LF M EG + + A+LS S
Sbjct: 557 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 616
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSW 482
+D ++ + + + A ++ + +AG + A+ + + W
Sbjct: 617 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 676
Query: 483 TSMIVALAQH 492
+++ A H
Sbjct: 677 QTLLSACRVH 686
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 121/270 (44%), Gaps = 38/270 (14%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
+A L A A L+ G Q+HA +++ F + + N LI YAK G + +A ++ + G
Sbjct: 203 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD--G 260
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+ NV+++T L+ G++ +G ++ + LF
Sbjct: 261 MPERNVVSWTALMVGFL-------------------------------HHGEARECLRLF 289
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M G PN +TLSA L G QIH +R+G V+N+L+ MYSK
Sbjct: 290 GEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKG 347
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVG 519
ARRVF++I R +W SMI A G G +++ +F M +PD T+
Sbjct: 348 RWTGDARRVFDVIPSRN-LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFAS 406
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
+L AC+ G +G + + M V + P
Sbjct: 407 LLKACSGLGAAREGAQVHAAMA-VRGVSPA 435
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P ++ +L S+ +SL G Q+HA+ ++ G S ++N LI MY+K G ++ A
Sbjct: 196 PMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAG 255
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC--- 524
VF+ + R VSWT+++V HG E ++LF M G P+ T L AC
Sbjct: 256 EVFDGMPERN-VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGG 314
Query: 525 ------THGGLVEQGQRYYNMMKN-----------------VHKIKPTP--SHFASMVDL 559
HG V G ++++ N V + P+ + + SM+
Sbjct: 315 TRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISG 374
Query: 560 LGRAGLLQEAYNFIENMPL----EPDVVAWGSLLSACRVHKNLDLGKI--AAEKLLLIEP 613
AG +++ M +PD + SLL AC G AA + + P
Sbjct: 375 YAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSP 434
Query: 614 -DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
N+ AL ++Y C + A + + G+++ W +
Sbjct: 435 ASNAILAGALLDVYVKCHRLPVAMQV-----FDGLERRNAIQWTTV 475
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 44/245 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH K L V + NSL++ Y K A + F EMP + + SW +++ K
Sbjct: 523 GKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGK 582
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL----- 142
G A ++F M D V++ ++ + G R F + QD+ +
Sbjct: 583 HGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAE 642
Query: 143 ----------------------------PTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
PT ++L++C D++ G++V ++
Sbjct: 643 HYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAV 702
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV-----SSWNVV-VSLHIHSGRLD 228
VN L N+ A+ G+ + + MR K + SW V +H G D
Sbjct: 703 DGDNPVNYV-MLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGD 761
Query: 229 LARAQ 233
A Q
Sbjct: 762 DAHPQ 766
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/754 (33%), Positives = 393/754 (52%), Gaps = 117/754 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y+K G +DLA VF + +DSVSW +I ++ GR AI +F +M + V+
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + +SVL++CT + G+++H F+VK GLS V N+L+ +Y++ G+ + A+ +
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F +M RD +++NS+I+G +Q G+ AL
Sbjct: 271 -------------------------------FSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M D +KPD T+AS LSACA++ GKQ+H+Y+I+ +
Sbjct: 300 QLFEKMQLDC-MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSS----------- 347
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
++I +LLD Y+K DI A F + +VV W
Sbjct: 348 ----------------------DLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNV 385
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
MLV Y Q G ++ +F M EG PN YT ++L +SL +LD G+QIH ++SG
Sbjct: 386 MLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSG 445
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ V + LI MY+K G ++ AR + + ++ VSWT+MI QH L EA++LF
Sbjct: 446 FQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQHDLFAEALKLF 504
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY-------------------------- 536
+ M GI+ D+I + ++AC + QGQ+
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLIT 564
Query: 537 -------------------------YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
+N M + S S+ + + + GL+
Sbjct: 565 LYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVT 624
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
F+ MP+EPD + W +LLSAC VHKN+++G+ AA LL +EP++S Y L N+Y+ GK
Sbjct: 625 FVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGK 684
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+ R+ MK GVKK G SW++++N +H F V D LHP + IY + + + E
Sbjct: 685 WDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGE 744
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+V D ++L+DVE++ K+ HSEKLA+AFGL+S +R++KNLRVCNDCH+
Sbjct: 745 IGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNW 804
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IKF+ K+ +R IVVRDA RFHHF+ G+CSC+DYW
Sbjct: 805 IKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 253/522 (48%), Gaps = 115/522 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H I+K GL F+ N+L+ Y++ ++ A+++F +M + S+N+++S A
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
++G D A+++F +M D + P TV S
Sbjct: 291 QRGFSD-------------------------------RALQLFEKMQLDCMKPDCVTVAS 319
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L++C ++G GK++HS+V+K G+S + + SLL++Y K D A F +N
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V WNV M+ Y Q G E+ +F M +
Sbjct: 380 VVLWNV-------------------------------MLVAYGQLGNLSESYWIFLQM-Q 407
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
L P+++T S L C +L L LG+QIH +I++ F V + LI YAK G ++
Sbjct: 408 IEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELD 467
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A+ I+++ LR+ DVV+WTAM+ GY Q+
Sbjct: 468 TARGILQR---------------------------------LREEDVVSWTAMIAGYTQH 494
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
L +A++LF+ M +G + +N S+ +S + + +L+ G+QIHA + SG + LS+
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554
Query: 451 NA-----LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
NA LIT+YSK G+I A+R F + + VSW +MI +QHG G EA+ LFE M
Sbjct: 555 NALASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQHGYGSEAVSLFEEM 613
Query: 506 LELGIKPDHITYVG-------------VLTACTHGGLVEQGQ 534
+LG+ P+H+T+VG +L+ACT +E G+
Sbjct: 614 KQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGE 655
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 173/727 (23%), Positives = 307/727 (42%), Gaps = 157/727 (21%)
Query: 13 LEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
++ Y L + S + K +HARI K G L + L++ Y + A K+FD
Sbjct: 10 VQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFD 69
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
++P + WN ++S + LA +V L
Sbjct: 70 DIPSSNVSFWNKVISGLLAK---KLASQVLGL---------------------------- 98
Query: 133 FVEMVQDQVLPTQFTVTSVLASCT-ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
F M+ + V P + T SVL +C+ +++H+ ++ G V N L+++Y+
Sbjct: 99 FSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYS 158
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K G +AK VF+ + LK+ SW ++S G
Sbjct: 159 KNGHVDLAKLVFERLFLKDSVSWVAMIS-------------------------------G 187
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
SQNG + EA+ +F M K S++ P + +S LSAC +E KLG+Q+H +I++ +
Sbjct: 188 LSQNGREDEAILLFCQMHK-SAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSS 246
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
V NAL++ Y++ G N+IA A +IF
Sbjct: 247 ETFVCNALVTLYSRWG-----------------NLIA----------------AEQIFSK 273
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ RD +++ +++ G Q G + A++LF M + KP+ T++++LS +S+ + G
Sbjct: 274 MHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKG 333
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
KQ+H+ ++ G +S L + +L+ +Y K +I A F L + V W M+VA Q
Sbjct: 334 KQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYF-LTTETENVVLWNVMLVAYGQ 392
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK------NVHK 545
G E+ +F +M G+ P+ TY +L CT G ++ G++ + + NV+
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452
Query: 546 IKPTPSHFASMVDLLGRAGLLQ---------------------------EAYNFIENMPL 578
+A +L G+LQ + + +EN +
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512
Query: 579 EPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLL-----IEPDNSGAYSALCNLYSSCGKW 632
D + + S +SAC + L+ G +I A+ + + N+ A + L LYS CG
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSI 572
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKV--HVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
EDA ++ + + SW + H +G E +++E+K
Sbjct: 573 EDAKR-----EFFEMPEKNVVSWNAMITGYSQHGYGSE-------------AVSLFEEMK 614
Query: 691 EMGFVPD 697
++G +P+
Sbjct: 615 QLGLMPN 621
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/570 (24%), Positives = 239/570 (41%), Gaps = 132/570 (23%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ GK +H+ +IK G+ + ++ SL++ Y K I A + F + + WN +L AY
Sbjct: 331 YKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAY 390
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
++G + +F++M + ++P Q+T
Sbjct: 391 G-------------------------------QLGNLSESYWIFLQMQIEGLMPNQYTYP 419
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +CT+LG L G+++H+ V+K+G V V + L++MYAK G+ A+ + +R
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-- 477
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
E DVV+W +MIAGY+Q+ EAL +F M
Sbjct: 478 -----------------------------EEDVVSWTAMIAGYTQHDLFAEALKLFQEM- 507
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++ ++ D +S +SACA ++ L G+QIHA + + +GNAL S
Sbjct: 508 ENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALAS-------- 559
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
L+ Y K G I A+R F + +++VV+W AM+ GY Q
Sbjct: 560 --------------------NVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQ 599
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTL-------------SAMLSVSSSLASLDHGKQIHA 436
+G +AV LF M + G PN+ T +LS + +++ G + A
Sbjct: 600 HGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIG-EFAA 658
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR----QETVSWTSMIVALAQH 492
L E + L MY+ +G + R ++ R + SW + ++
Sbjct: 659 RHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAF 718
Query: 493 GLGEE----AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
+G+ A Q++E + +L + I YV Q YN++ +V + +
Sbjct: 719 FVGDRLHPLAEQIYEYIDDLNERAGEIGYV---------------QDRYNLLNDVEQEQK 763
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
P+ + L GLL + MP+
Sbjct: 764 DPTAYIHSEKLAVAFGLL----SLTNTMPI 789
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M G + N T + + SL K++HA +SG + + LI +Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 463 INAARRVFNLIHWRQETVS-WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
++ A ++F+ I VS W +I L L + + LF M+ + PD T+ VL
Sbjct: 61 VDNAIKLFDDI--PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC+ G Q + H +P ++DL + G + A E + L+ D
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK-D 177
Query: 582 VVAWGSLLSA 591
V+W +++S
Sbjct: 178 SVSWVAMISG 187
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/753 (33%), Positives = 401/753 (53%), Gaps = 97/753 (12%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +HA++++ GL F + ++ F + ES
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQES----------------------------- 35
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G L A VF+ +PN S + +II + + A+ + EM+ ++P ++T S+
Sbjct: 36 GSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLF 95
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
SC + S GK++H K G + N+L+NMY+ G
Sbjct: 96 KSCR---NSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCG------------------ 134
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+VS AR FD+M ++ VV+W +MI ++Q EA+ +F M+K
Sbjct: 135 ---CLVS----------ARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
++KP++ TL + L+ACA L + K+IH YI F
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGR--------------------- 220
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
+V+ T L+D Y K G + AR +FD +++++ +W M+ G+ ++
Sbjct: 221 ------------HVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSN 268
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
++A+ LFR M +G K + T++++L + L +L+ GK +HA + +++ A
Sbjct: 269 YEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTA 328
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+ MY+K G+I A +VF+ + ++ ++WT++I+ LA G E A+Q F+ M G+KP
Sbjct: 329 LVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKP 387
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D IT+VGVL AC+H G V++G ++N M + + I+PT H+ +VD+LGRAG + EA
Sbjct: 388 DAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEEL 447
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I++MP+ PD G LL ACR+H NL+ + AA++LL I+P +SG Y L N+Y S KW
Sbjct: 448 IKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKW 507
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
E+A R+ M G++K G S +++ VH F D H Q I + + ++K
Sbjct: 508 EEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNA 567
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+VPD + VL D+ E+ KE L HSEKLAIAFGL+ST T +R++KNLR+C+DCHSA
Sbjct: 568 GYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSAT 627
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I KL +REI+VRD RFHHFK G CSCR +W
Sbjct: 628 KLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 225/525 (42%), Gaps = 101/525 (19%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
RN GK +H K G + +N+LMN Y+ + A+KVFD+M KT+ SW T++
Sbjct: 99 RNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMI 158
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-VLPTQ 145
+A+ + PN A+R+F M++ + V P +
Sbjct: 159 GVHAQWDQ-----------PNE--------------------AVRLFDRMMKSENVKPNE 187
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
T+ +VL +C DL+ K++H ++ + G V + L+++Y K G +A+ +FD
Sbjct: 188 VTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDK 247
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+ KN+ SWN++++ H+ + EAL +F
Sbjct: 248 AQEKNLFSWNIMINGHVEDSNYE-------------------------------EALLLF 276
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M + +K DK T+AS L AC +L L+LGK +HAYI + D +G AL+ YAK
Sbjct: 277 REM-QTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAK 335
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A + +F + ++DV+ WTA+++
Sbjct: 336 CGSIETAIQ---------------------------------VFHEMPEKDVMTWTALIL 362
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEA 444
G G ++A++ F M +G KP+ T +L+ S +D G ++ + G
Sbjct: 363 GLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQ 422
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
++ L+ + +AG I A + + + ++ A HG E A + ++
Sbjct: 423 PTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQ 482
Query: 505 MLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
+LE I P H TYV + E+ +R +M KP
Sbjct: 483 LLE--IDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKP 525
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 77/328 (23%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L++ +L + ++R+ + K +H I + G V L LM+ Y K
Sbjct: 185 PNEVTLVN-------VLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ +FD+ K L SWN +++ + E
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHV-------------------------------ED 266
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
++ A+ +F EM + + T+ S+L +CT LG L GK +H+++ K + V +
Sbjct: 267 SNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALG 326
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IE 239
+L++MYAK G A VF M K+V +W ++ G+ + A FD+M ++
Sbjct: 327 TALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVK 386
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANM------------------------------- 268
D +T+ ++A S G+ E + F +M
Sbjct: 387 PDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEE 446
Query: 269 -LKDSSLKPDKFTLASTLSAC---ANLE 292
+K + PD+F L L AC NLE
Sbjct: 447 LIKSMPMAPDQFVLGGLLGACRIHGNLE 474
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/783 (32%), Positives = 402/783 (51%), Gaps = 111/783 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL +++ + + +H ++K G +F+ SL+N Y + + A+ +FD+
Sbjct: 81 YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQ-- 138
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
MP ++ V+WT +I Y + A+ +FVE
Sbjct: 139 -----------------------------MPEKNVVTWTALITGYTVNSQLLEALEVFVE 169
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ P+ +T+ ++L +C+A + G +VH + +K ++ NSL MYAK
Sbjct: 170 MLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAK--- 226
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
SG L+ A F + +++V+TW +MI+ +++
Sbjct: 227 ----------------------------SGSLESAMRAFRMVPDKNVITWTTMISACAED 258
Query: 256 -GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
Y L +F +ML D L P++FTL S +S C L LGKQ+ A+ + P
Sbjct: 259 ENYTELGLTLFLDMLMDGVL-PNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIP 317
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N+ + YL Y++ G+ A R F+ + D
Sbjct: 318 VKNSTM----------------------YL-----------YLRKGETDEAMRFFEEMDD 344
Query: 375 RDVVAWTAMLVGYEQ-----------NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
++ W AM+ GY Q A+++FR++ R KP+ +T S++LSV S
Sbjct: 345 VSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCS 404
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
S+ +L+ G+QIHA +++G S + V++AL+ MY+K G I A + F + R V+WT
Sbjct: 405 SMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRT-LVTWT 463
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI +QHG +EAIQLFE M G++P+ IT+V VL+AC++ GL E+ + Y++MMK
Sbjct: 464 SMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEE 523
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+KI+P H+ MVD+ R G L +A+ FI EP+ W SL++ CR H N++L
Sbjct: 524 YKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFY 583
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
AA++L+ + P Y L N+Y S +W D A +RK MK G+ SW+ I++KV+
Sbjct: 584 AADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVY 643
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM--LRHHSEKL 721
F D H D +Y + + ++ K +G+ P ++ L D E+D K +RHHSE+L
Sbjct: 644 FFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERL 703
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+A GL+ TP T+R+ KN+ +C DCHS+IKF L +REIVVRD+ R H FK G CSC
Sbjct: 704 AVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSC 763
Query: 782 RDY 784
D+
Sbjct: 764 GDF 766
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 178/412 (43%), Gaps = 72/412 (17%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S + L NL GK V A K G ++ +KNS M Y +
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNL-------GKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGE 331
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
A + F+EM ++ +WN ++S YA+ + +D + +
Sbjct: 332 TDEAMRFFEEMDDVSIITWNAMISGYAQI-----------METAKDDLHARS-------- 372
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
R A+++F + + + P FT +S+L+ C+++ L G+++H+ +KTG V V
Sbjct: 373 -RGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVN 431
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
++L+NMY K G A F M ++ + +W
Sbjct: 432 SALVNMYNKCGCIEDATKAFVEMSIRTLVTW----------------------------- 462
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC--ANLEKLKLGKQIH 301
SMI+GYSQ+G EA+ +F +M + + ++P++ T LSAC A L + K H
Sbjct: 463 --TSMISGYSQHGRPQEAIQLFEDM-RFAGVRPNEITFVCVLSACSYAGLAE----KAEH 515
Query: 302 AYIIRTEFDATGPVGN---ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
+ + E P+ + ++ + ++G ++ A + ++G N +++L+ G
Sbjct: 516 YFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFE-PNEAIWSSLVAGCRS 574
Query: 359 IGDIGPARRIFD---SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
G++ A D LR + + + +L Y N D + + M +EG
Sbjct: 575 HGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLMKQEG 626
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 9/257 (3%)
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA------VELF 400
+A G+ G R S+ D W + QNG +A V
Sbjct: 7 VAVPVAASGFPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEA 66
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
+M+REG + +L V SL + +H +++G ++ + V+ +L+ Y +
Sbjct: 67 MAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRC 126
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G AR +F+ + + V+WT++I + EA+++F MLE G P H T +
Sbjct: 127 GASQDARSLFDQMP-EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAM 185
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L AC+ + G + + + T S S+ + ++G L+ A +P +
Sbjct: 186 LNACSASNNADLGSQVHGYTIKYRALSIT-SIGNSLCRMYAKSGSLESAMRAFRMVP-DK 243
Query: 581 DVVAWGSLLSACRVHKN 597
+V+ W +++SAC +N
Sbjct: 244 NVITWTTMISACAEDEN 260
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 262/711 (36%), Positives = 389/711 (54%), Gaps = 80/711 (11%)
Query: 83 NTILSAYAKQ----GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV- 137
N + SA AK R + A +VF+ +P+ D+V W T++ + A+ FV M
Sbjct: 158 NFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG----SEALEAFVRMAG 213
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
V P T+ SVL + + + + G+ VH+F K GL+ +V L+++YAK GD
Sbjct: 214 AGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGD-- 271
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
++ AR FD+M D+VT+N++I+GYS NG
Sbjct: 272 -----------------------------MECARHLFDRMEGPDLVTYNALISGYSINGM 302
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
++ +F ++ L+P TL + + + L +HA++++ DA PV
Sbjct: 303 VGSSVELFKELV-GMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVST 361
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
AL TTL Y + D+ ARR FD++ ++ +
Sbjct: 362 AL------------------------------TTL---YCRFNDMDSARRAFDAMPEKTM 388
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+W AM+ GY QNGL + AV LF+ M +PN T+S+ LS + L +L GK +H
Sbjct: 389 ESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKI 448
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
++ V ALI MY K G+I AR +F+ + + VSW MI HG G E
Sbjct: 449 IANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMD-NKNVVSWNVMISGYGLHGQGAE 507
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A++L++ M++ + P T++ VL AC+HGGLV++G + M + + I P H MV
Sbjct: 508 ALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMV 567
Query: 558 DLLGRAGLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
DLLGRAG L+EA+ I P + P + WG+LL AC VHK+ DL K+A++KL +EP+
Sbjct: 568 DLLGRAGQLKEAFELISEFPKSAVGPGI--WGALLGACMVHKDGDLAKLASQKLFELEPE 625
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L NLY+S ++ +AA +R+ K + KT G + ++I ++ HVF D HPQ
Sbjct: 626 NTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQ 685
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
DAIY + K+ ++ E G+ PDT + L+DVEE+ KE M++ HSEKLAIAFGL++T T
Sbjct: 686 SDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGT 745
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLRVC DCH+A K I K+ R IVVRDA+RFHHF+ G+CSC DYW
Sbjct: 746 EIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 207/511 (40%), Gaps = 106/511 (20%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A +L + + N +G+ VHA KCGL + L++ YAK + A+ +FD M
Sbjct: 225 ASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEG 284
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
L ++N ++S Y+ G + +++ +F E+
Sbjct: 285 PDLVTYNALISGYSINGMVG-------------------------------SSVELFKEL 313
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
V + P+ T+ +++ + G +H+ VVK GL V+ +L +Y + D
Sbjct: 314 VGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDM 373
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A+ FD M K + SWN ++S + +G ++A A F QM
Sbjct: 374 DSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQM------------------- 414
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+AL + N L SS LSACA L L LGK +H I + + V
Sbjct: 415 ---QALNVRPNPLTISS----------ALSACAQLGALSLGKWVHKIIANEKLELNVYVM 461
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
ALI Y K G I AR IFDS+ +++
Sbjct: 462 TALIDMYVKCG---------------------------------SIAEARCIFDSMDNKN 488
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+W M+ GY +G +A++L++ M+ P + T ++L S + G +
Sbjct: 489 VVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFR 548
Query: 437 SALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLI-HWRQETVS---WTSMIVALAQ 491
S G + ++ + +AG + A F LI + + V W +++ A
Sbjct: 549 SMTSDYGITPGIEHCTCMVDLLGRAGQLKEA---FELISEFPKSAVGPGIWGALLGACMV 605
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
H G+ A +++ EL +P++ Y +L+
Sbjct: 606 HKDGDLAKLASQKLFEL--EPENTGYYVLLS 634
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP ++ S L A L +L GK VH I L L+V++ +L++ Y K S
Sbjct: 421 PNPLTISSALSACAQLGALSL-------GKWVHKIIANEKLELNVYVMTALIDMYVKCGS 473
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGR----LDLACEVFNLMPNRDSVSWTTIIVT 119
I+ A+ +FD M K + SWN ++S Y G+ L L ++ + + S ++ +++
Sbjct: 474 IAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYA 533
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL--SAGKKVHSF 170
+ G K +F M D + +T + CT + DL AG+ +F
Sbjct: 534 CSHGGLVKEGTTVFRSMTSD------YGITPGIEHCTCMVDLLGRAGQLKEAF 580
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 408 PKPNNYTLS-AMLSVSSSL---------ASLDHGKQIHASALRSGEASSLSVSNALITMY 457
P P++++ + A S++SS A+ + +HA A+ SG A+ V++AL +Y
Sbjct: 109 PSPDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLY 168
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHIT 516
N AR+VF+ + +TV W +++ L+ G EA++ F RM G ++PD T
Sbjct: 169 FTLSRGNDARKVFDAVP-SPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTT 223
Query: 517 YVGVLTAC------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
VL A T G V + ++ H + ++ L + G ++ A
Sbjct: 224 LASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT-------GLISLYAKCGDMECAR 276
Query: 571 NFIENMPLEPDVVAWGSLLS 590
+ + M PD+V + +L+S
Sbjct: 277 HLFDRME-GPDLVTYNALIS 295
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/638 (37%), Positives = 363/638 (56%), Gaps = 67/638 (10%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ +L S T L G+++H+ ++K+GL V + L+N Y+K +++ VF+
Sbjct: 57 ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESE 116
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K+ + TW+S+I+ ++QN A+ F
Sbjct: 117 RKSST-------------------------------TWSSVISSFAQNEEPVLAIQYFCR 145
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M+ ++ L PD S ACA L + +GK +H +I+T +D
Sbjct: 146 MIGEN-LCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYD----------------- 187
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
++V ++L+D Y K GDI AR +FD + R+VV+W+ M+ GY
Sbjct: 188 ----------------VDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGY 231
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q G +++A+ LF+ + EG N++TLS+++ V S L+ GKQIH ++ S
Sbjct: 232 TQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSG 291
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V ++LI++YSK G I A RVF+ + + + W +M++A AQH +EA LF +M
Sbjct: 292 FVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGM-WNAMLIACAQHAHTKEAFDLFTKMEN 350
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G++P+ IT++ VL AC+H GLVE+G++Y+ +MK ++I+P H+ASMVDLLGRAG LQ
Sbjct: 351 AGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQ 409
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA + I+ MP EP WG+ ++ CR+H N DL AA+K+ + +SG + L N Y+
Sbjct: 410 EALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYA 469
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G++EDAA RK ++ GVKK G SW++ N+VH F D H + IY K+ + +
Sbjct: 470 AAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGE 529
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E++ G+V DT+ VL +V + K Q +R+HSE+LAIAFGLIS P +RIMKNLRVC D
Sbjct: 530 EMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGD 589
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+AIKFI KL R I+VRD RFH F+ G CSC DYW
Sbjct: 590 CHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 220/511 (43%), Gaps = 100/511 (19%)
Query: 3 TP-NPPSLISPLEFYAH---LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFY 58
TP N P+ + Y H LL S +SR+ G+ +HA IIK GL + + + L+NFY
Sbjct: 40 TPQNSPNRFCSEKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFY 99
Query: 59 AKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIV 118
+KT+ +P+ L+ +VF + S +W+++I
Sbjct: 100 SKTQ-----------LPL--------------------LSSQVFEESERKSSTTWSSVIS 128
Query: 119 TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG 178
++ + AI+ F M+ + + P S +C LG GK VH V+KTG
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
V V +SL++MYAK GD A+ VFD M +N
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRN---------------------------- 220
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
VV+W+ MI GY+Q G EA+ +F L + L + FTL+S + C + L+LGK
Sbjct: 221 ---VVSWSGMIYGYTQLGEHEEAMRLFKEALLE-GLDVNDFTLSSVIRVCGSATLLELGK 276
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
QIH +T +D +G VG++LIS Y+K G L++G
Sbjct: 277 QIHGLCFKTSYDLSGFVGSSLISLYSKCG------------------------LIEG--- 309
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
A R+FD + +++ W AML+ Q+ K+A +LF M G +PN T +
Sbjct: 310 ------AYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCV 363
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L S ++ GK+ A + +++ + +AG + A V +
Sbjct: 364 LYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
W + I HG + A +++ ELG
Sbjct: 424 ESVWGAFITGCRIHGNTDLAAFAADKVFELG 454
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/702 (35%), Positives = 391/702 (55%), Gaps = 69/702 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++AY K G ++ A +F+ + D VSW ++I G N + +F++M+ V
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 568
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ SVL + +G+LS G+ +H F VK S V +N+LL+MY+K G+
Sbjct: 569 VDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGN------- 621
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ A F +M + +V+W S IA Y + G +A+
Sbjct: 622 ------------------------LNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAI 657
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G+F M + ++PD +T+ S + ACA L G+ +H+Y+I+ + PV NALI+
Sbjct: 658 GLFDEM-QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINM 716
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G VE+ AR +F + +D+V+W
Sbjct: 717 YAKCGS-------VEE--------------------------ARLVFSKIPVKDIVSWNT 743
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY QN L +A+ELF M ++ KP++ T++ +L + LA+LD G++IH LR G
Sbjct: 744 MIGGYSQNSLPNEALELFLDMQKQF-KPDDITMACVLPACAGLAALDKGREIHGHILRRG 802
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S L V+ AL+ MY+K G + A+ +F++I +++ +SWT MI HG G EAI F
Sbjct: 803 YFSDLHVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTF 861
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M GI+PD ++ +L AC+H GL+ +G +++N M+N ++P H+A +VDLL R
Sbjct: 862 NEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 921
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
G L +AY FIE+MP++PD WG LLS CR+H ++ L + AE + +EPDN+ Y L
Sbjct: 922 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 981
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y+ KWE+ +RK M+ G K+ G SW+++ K ++F + HPQ I +
Sbjct: 982 ANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLL 1041
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR-HHSEKLAIAFGLISTPENTTLRIMKN 741
K+ +++ + VL + E+D++++M++ HSEK A+AFG+++ P T+R+ KN
Sbjct: 1042 RKLTMQMQNEDYFSMFRYVLIN-EDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKN 1100
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
RVC DCH KF+ K REIV+RD+ RFHHFK GLCSCRD
Sbjct: 1101 QRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 162/390 (41%), Gaps = 68/390 (17%)
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
+ S L CA + L+ GK++H+ II G+ I + + +
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISN--------------------GISIDEALGAK- 409
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
L+ Y+ GD+ R+IFD + + V W ++ Y + G +++V L
Sbjct: 410 ------------LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F+ M + G N YT + +L ++L + K++H L+ G S+ +V N+LI Y K
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G + +A +F+ + + VSW SMI +G +++F +ML LG++ D T V
Sbjct: 518 FGGVESAHNLFDELS-EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVS 576
Query: 520 VLTACTHGGLVEQGQRYY-------------------NMMKNVHKIKPTPSHFASMVDL- 559
VL A + G + G+ + +M + F M D
Sbjct: 577 VLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTT 636
Query: 560 ----------LGRAGLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
R GL +A + M + PD+ S++ AC +LD G+
Sbjct: 637 IVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHS 696
Query: 607 KLLLIE-PDNSGAYSALCNLYSSCGKWEDA 635
++ N +AL N+Y+ CG E+A
Sbjct: 697 YVIKNGMGSNLPVTNALINMYAKCGSVEEA 726
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/704 (35%), Positives = 380/704 (53%), Gaps = 86/704 (12%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K G L A VF+ MP RD VSWTT++ Y F A+R+ EM V
Sbjct: 127 NALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVK 186
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ + S++A L D+ +G+ VH ++V+ VGDE M
Sbjct: 187 LSGVALISLIAVFGNLLDMKSGRAVHGYIVRN------------------VGDEKM---- 224
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
VS ++ ++ G L A+ FD++ +R VV+W MIAG ++ E
Sbjct: 225 -------EVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGA 277
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F ML++ L P++ TL S ++ C + L LGK HAY++R F
Sbjct: 278 KNFNRMLEEK-LFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGF------------- 323
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
G+ +A T L+D Y K G +G AR +F+ ++ +DV W+
Sbjct: 324 -----GMSLA---------------LVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSV 363
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ Y LF M+ KPNN T+ ++LS+ + +LD GK HA R G
Sbjct: 364 LISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHG 423
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + ALI MY+K G++ AR +FN R + W +M+ + HG G+EA++LF
Sbjct: 424 LEVDVILETALINMYAKCGDVTIARSLFNEAMQR-DIRMWNTMMAGFSMHGCGKEALELF 482
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M G++P+ IT+V + AC+H GL+E H+ +VDLLGR
Sbjct: 483 SEMESHGVEPNDITFVSIFHACSHSGLME--------------------HYGCLVDLLGR 522
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L EA+N IENMP+ P+ + WG+LL+AC++HKNL LG++AA K+L ++P N G YS L
Sbjct: 523 AGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCG-YSVL 581
Query: 623 -CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
N+Y+S +W D ++R++M + G+KK G SW+++ VH F D Q +Y
Sbjct: 582 KSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEM 641
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ +++E G+ P+TA+VL +++E+ KE L +HSEKLA AFGLIST T +RI+KN
Sbjct: 642 VTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKN 701
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C+DCH+A K + K+ R I+VRD RFHHF +G CSC YW
Sbjct: 702 LRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/574 (23%), Positives = 226/574 (39%), Gaps = 164/574 (28%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL++ ++ + +G+ +H K G VF+ N+LMN Y K + A+ VFD+MP +
Sbjct: 94 LLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERD 153
Query: 79 LCSWNTILSAYA----------------------------------------KQGRLDLA 98
+ SW T+L Y K GR
Sbjct: 154 VVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHG 213
Query: 99 CEVFNLMPNRDSVSWTTIIV-TYNEIGRFKNAIRMFVEM--------------------- 136
V N+ + VS TT ++ Y + G +A R+F +
Sbjct: 214 YIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRL 273
Query: 137 ----------VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+++++ P + T+ S++ C +G L GK H+++++ G + + +L
Sbjct: 274 DEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTAL 333
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MY K G A+A+F+G++ K+V W+V++S + H +D F +M+ DV
Sbjct: 334 IDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDV---- 389
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
KP+ T+ S LS CA L LGK HAYI R
Sbjct: 390 ----------------------------KPNNVTMVSLLSLCAEAGALDLGKWTHAYINR 421
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ + ALI+ YAK G V I AR
Sbjct: 422 HGLEVDVILETALINMYAKCGDVTI---------------------------------AR 448
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+F+ RD+ W M+ G+ +G K+A+ELF M G +PN+ T ++ S
Sbjct: 449 SLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSG 508
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
++H L+ + +AG+++ A + + R T+ W +++
Sbjct: 509 LMEH-------------------YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALL 549
Query: 487 VALAQH---GLGEEAIQLFERMLELGIKPDHITY 517
A H LGE A + ++LEL P + Y
Sbjct: 550 AACKLHKNLALGEVAAR---KILEL--DPQNCGY 578
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 209/490 (42%), Gaps = 100/490 (20%)
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+N +I+ Y+ N + + +M + + D F L S L ACA LG+++H +
Sbjct: 55 YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+ F + V NAL++ Y K G + A+ + +Q + +V+++TT+L Y++ G
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQ--MPERDVVSWTTMLGCYVRSKAFGE 172
Query: 365 ARR----------------------IFDSLRD-------------------RDVVAWTAM 383
A R +F +L D +V TA+
Sbjct: 173 ALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTAL 232
Query: 384 LVGYEQNGLNKDAVELF-----RSMVR---------------EGPK-----------PNN 412
+ Y + G A LF RS+V EG K PN
Sbjct: 233 IDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNE 292
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
TL ++++ + +LD GK HA LR+G SL++ ALI MY K G + AR +FN
Sbjct: 293 ITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNG 352
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ +++ W+ +I A A ++ LF ML +KP+++T V +L+ C G ++
Sbjct: 353 VK-KKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDL 411
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G ++ + N H ++ +++++ + G + A + N ++ D+ W ++++
Sbjct: 412 G-KWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLF-NEAMQRDIRMWNTMMAGF 469
Query: 593 RVHKNLDLGKIAAEKLLL-----IEPDN------------SGA---YSALCNLYSSCGKW 632
+H GK A E +EP++ SG Y L +L G
Sbjct: 470 SMH---GCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEHYGCLVDLLGRAGHL 526
Query: 633 EDAANIRKSM 642
++A NI ++M
Sbjct: 527 DEAHNIIENM 536
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/566 (40%), Positives = 339/566 (59%), Gaps = 35/566 (6%)
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
+++ R+D A F+ + WN MI G++ +G +L +++ M+ + LKPDKF
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM-EKGLKPDKF 819
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
L +CA L L+ GK IH + L+ C
Sbjct: 820 AFPFALKSCAGLSDLQRGKVIHQH---------------LVCC----------------- 847
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
G S ++ L+D Y K GDI AR +FD + RD+V+WT+M+ GY NG N + +
Sbjct: 848 GCSN-DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGF 906
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M G PN ++ ++L +L +L G+ H+ +++G + V+ A++ MYSK
Sbjct: 907 FDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSK 966
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G+++ AR +F+ + + V W++MI + HG G +AI LF++M++ G++P H+T+
Sbjct: 967 CGSLDLARCLFDETAGK-DLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTC 1025
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
VL+AC+H GL+E+G+ Y+ +M I S++A MVDLLGRAG L EA + IENMP+E
Sbjct: 1026 VLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE 1085
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
PD WGSLL ACR+H NLDL + A+ L ++P ++G + L N+Y++ +W + +R
Sbjct: 1086 PDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVR 1145
Query: 640 KSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTA 699
K M G K QGFS V+ N+VH FGV D HPQ + +Y K+ ++ +K +G+VP T
Sbjct: 1146 KMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTD 1205
Query: 700 SVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLV 759
VLHD+EE+ KE L +HSE+LAIAFGLI+T TTLRI KNLR+C DCH+AIK I K+V
Sbjct: 1206 FVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIV 1265
Query: 760 DREIVVRDATRFHHFKKGLCSCRDYW 785
+R I+VRD RFH F+ G+CSC DYW
Sbjct: 1266 NRVILVRDMHRFHRFEDGVCSCGDYW 1291
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/624 (31%), Positives = 334/624 (53%), Gaps = 68/624 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQV 141
+ ++ Y+K G++ A +VF D+V WT+++ Y + + A+ +F +MV D V
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+ T+ SV+++C L ++ AG VH V++ G + + NSLLN+YAK G E
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCE----- 257
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+A F +M E+DV++W++MIA Y+ N EA
Sbjct: 258 --------------------------KIAANLFSKMPEKDVISWSTMIACYANNEAANEA 291
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M+ + +P+ T+ S L ACA L+ GK+IH + F+
Sbjct: 292 LNLFHEMI-EKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFE----------- 339
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
L+ T L+D Y+K A +F L +DVV+W
Sbjct: 340 ----------------------LDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWV 377
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
A+L GY QNG+ ++ +FR+M+ +G +P+ + +L+ SS L +H +RS
Sbjct: 378 ALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS 437
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S++ V +LI +YSK G++ A ++F + R + V W+SMI A HG G EA+++
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEI 496
Query: 502 FERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
F++M++ ++P+++T++ +L+AC+H GLVE+G + ++ M + ++++P HF MVDLL
Sbjct: 497 FDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLL 556
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GR G L +A + I MP+ WG+LL ACR+H N+++G+ AA+ L ++P ++G Y
Sbjct: 557 GRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYI 616
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L N+Y+ GKW++ A +R +K G+KK G S V+++ VH F D HP IY
Sbjct: 617 LLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYE 676
Query: 681 KMAKIWDEIKEMGFVPDTASVLHD 704
+ K+ ++ + ++PD +LHD
Sbjct: 677 LLRKLEAQMGKEVYIPDLDFLLHD 700
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/563 (26%), Positives = 252/563 (44%), Gaps = 100/563 (17%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H+++ K G+ F L + YAK S+ A+KVFDE P + WN+ L +Y ++ +
Sbjct: 23 LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ +F+LM I T E P FT+ L +
Sbjct: 83 WEETLRLFHLM-----------ICTAGEA-------------------PDNFTIPIALKA 112
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C L L GK +H F K ++G +M +
Sbjct: 113 CAGLRMLELGKVIHGFAKKND----------------EIGSDMFVGSA------------ 144
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+V L+ G++ A F++ D V W SM+ GY QN EAL +F+ M+ +
Sbjct: 145 --LVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
D TL S +SACA L +K G +H +IR EFD P+ N+L++ YAK G +IA
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+F + ++DV++W+ M+ Y N
Sbjct: 263 ---------------------------------LFSKMPEKDVISWSTMIACYANNEAAN 289
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A+ LF M+ + +PN+ T+ + L + +L+ GK+IH A+ G SVS ALI
Sbjct: 290 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALI 349
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY K + A +F + +++ VSW +++ AQ+G+ +++ +F ML GI+PD
Sbjct: 350 DMYMKCSCPDEAVDLFQRLP-KKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDA 408
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNF 572
+ V +L A + G+ +Q + V + + F AS+++L + G L +A
Sbjct: 409 VAVVKILAASSELGIFQQALCLHGY---VVRSGFNSNVFVGASLIELYSKCGSLGDAVKL 465
Query: 573 IENMPLEPDVVAWGSLLSACRVH 595
+ M + DVV W S+++A +H
Sbjct: 466 FKGMIVR-DVVIWSSMIAAYGIH 487
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 202/432 (46%), Gaps = 72/432 (16%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y R+D A VF +PN S W +I + GRF +++ ++ +M++ + P +F
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
L SC L DL GK +H +V G S + V +L++MYAK GD
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGD------------- 868
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
++ AR FD+M RD+V+W SMI+GY+ NGY+ E LG F ++
Sbjct: 869 ------------------IEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFF-DL 909
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++ S + P++ ++ S L AC NL L+ G+ H+Y+I+T F+ V A++ Y+K G
Sbjct: 910 MRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGS 969
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+++ AR +FD +D+V W+AM+ Y
Sbjct: 970 LDL---------------------------------ARCLFDETAGKDLVCWSAMIASYG 996
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE---AS 445
+G + A++LF MV+ G +P++ T + +LS S L+ GK L + E A
Sbjct: 997 IHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYF--QLMTEEFVIAR 1054
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
LS ++ + +AG ++ A + + + W S++ A H + A ++ + +
Sbjct: 1055 KLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHL 1114
Query: 506 LELGIKPDHITY 517
L P H Y
Sbjct: 1115 FHL--DPVHAGY 1124
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/528 (24%), Positives = 225/528 (42%), Gaps = 123/528 (23%)
Query: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
+P +L+S + A LL N+K+ G VH +I+ + L NSL+N YAKT
Sbjct: 205 DPVTLVSVVSACAQLL--NVKA-----GSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCE 257
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
A +F +MP K + SW+T+++ YA NE
Sbjct: 258 KIAANLFSKMPEKDVISWSTMIACYAN-----------------------------NEAA 288
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
A+ +F EM++ + P TV S L +C +L GKK+H V G +V+
Sbjct: 289 --NEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST 346
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L++MY K A +F + K+V V+
Sbjct: 347 ALIDMYMKCSCPDEAVDLFQRLPKKDV-------------------------------VS 375
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W ++++GY+QNG ++++G+F NML D ++PD + L+A + L + +H Y+
Sbjct: 376 WVALLSGYAQNGMAYKSMGVFRNMLSD-GIQPDAVAVVKILAASSELGIFQQALCLHGYV 434
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R+ F++ VG +LI Y+K G +G
Sbjct: 435 VRSGFNSNVFVGASLIELYSKC---------------------------------GSLGD 461
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSS 423
A ++F + RDVV W++M+ Y +G +A+E+F MV+ +PNN T ++LS S
Sbjct: 462 AVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACS 521
Query: 424 SLASLDHG-----KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
++ G + +H LR ++ + ++ + + G + A + N +
Sbjct: 522 HAGLVEEGLKIFDRMVHDYQLRP-DSEHFGI---MVDLLGRIGQLGKAMDIINRMPIPAG 577
Query: 479 TVSWTSMIVALAQH---GLGEEAIQ-LFERMLELGIKPDHITYVGVLT 522
W +++ A H +GE A + LF + P H Y +L+
Sbjct: 578 PHVWGALLGACRIHHNIEMGEAAAKNLF------WLDPSHAGYYILLS 619
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 96/368 (26%)
Query: 2 ETPNPPSLI---------------SPLEFYAHLLQSNLKSRN---PFV------------ 31
+ PNP S + S LE Y+ +++ LK PF
Sbjct: 777 DIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQR 836
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK++H ++ CG +F+ +L++ YAK I A+ VFD+M V+ L SW +++S YA
Sbjct: 837 GKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAH 896
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G YN + F M V+P + ++ SV
Sbjct: 897 NG--------------------------YN-----SETLGFFDLMRSSGVIPNRVSILSV 925
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C LG L G+ HS+V++TG + V ++++MY+K G +A+ +FD K++
Sbjct: 926 LLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDL 985
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
W ++MIA Y +G+ +A+ +F M+K
Sbjct: 986 VCW-------------------------------SAMIASYGIHGHGRKAIDLFDQMVK- 1013
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCYAKVGGV 329
+ ++P T LSAC++ L+ GK ++ ++ EF + N ++ + G +
Sbjct: 1014 AGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDLLGRAGQL 1072
Query: 330 EIAQKIVE 337
A ++E
Sbjct: 1073 SEAVDLIE 1080
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +++S L Q+ SRN GK +H + G L + +L++ Y K
Sbjct: 305 PNSVTVVSAL-------QACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSC 357
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
A +F +P K + SW +LS YA+ G + Y +
Sbjct: 358 PDEAVDLFQRLPKKDVVSWVALLSGYAQNG------------------------MAYKSM 393
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G F+N M+ D + P V +LA+ + LG +H +VV++G + V V
Sbjct: 394 GVFRN-------MLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVG 446
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV- 242
SL+ +Y+K G A +F GM +++V W+ +++ + GR A FDQM++
Sbjct: 447 ASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTV 506
Query: 243 ----VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
VT+ S+++ S G E L +F M+ D L+PD
Sbjct: 507 RPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPD 545
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
Q+H+ ++G + L ++Y+K ++ AAR+VF+ W S + + +
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP-HPNVHLWNSTLRSYCRE 80
Query: 493 GLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
EE ++LF M+ G PD+ T L AC ++E G+ + K +I
Sbjct: 81 KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++V+L + G + EA E PD V W S+++
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTG 179
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 266/814 (32%), Positives = 431/814 (52%), Gaps = 90/814 (11%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV---KTLCSWNT 84
N G+ +H++I + L N+L++ Y+K S+ AK+ FD +P + + +WN
Sbjct: 156 NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNA 215
Query: 85 ILSAYAKQGRLDLACEVFNLM-------PN------------------------------ 107
++SA+ + G A ++F M PN
Sbjct: 216 MISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 275
Query: 108 -----RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS 162
R++ T ++ +Y ++G +A +F+ ++ + T ++++++C G
Sbjct: 276 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQ 335
Query: 163 AGKKVHSFVVKTGLSGCVNVTNSLLNMYA--KVGDEMMAKAVFDGMRLKNVSSWNVV--- 217
++ + G S+LN + +VG A + M + + + NV+
Sbjct: 336 ESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVG-SATAFVLEQAMEVVSATRDNVLGTT 394
Query: 218 -VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++ + S L ARA FD + DVV+WN+M A Y Q+ EAL +F ML + ++P
Sbjct: 395 LLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEG-VRP 453
Query: 277 DKFTLASTLSACANLEKLK---LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
T + L+ACA +GK+I + + + V NA ++ YAK G + A+
Sbjct: 454 SVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADAR 513
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ E+ I PARR D + W +ML Y +GL
Sbjct: 514 AVFER-----------------------ISPARR--------DCITWNSMLAAYGHHGLG 542
Query: 394 KDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
K+A ELF++M E KPN T A+L S+S S+ G++IHA + +G S + NA
Sbjct: 543 KEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNA 602
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
L+ MY+K G+++ A+ +F+ QE V +WTS+I AQ+G E A++LF M + G++
Sbjct: 603 LLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVR 662
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+H+T++ LTAC HGG +EQG + M H I P HF+ +VDLLGR G L EA
Sbjct: 663 PNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEK 722
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+E + DV+ W +LL AC+ K L+ G+ AE+++ ++P+ + +Y L ++Y++ G+
Sbjct: 723 LLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGR 781
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W +AA IRK+M G++ G S V++ ++H F D HP+ + IY ++ ++ IK
Sbjct: 782 WNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKA 841
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+V DT VLHDV ++ KE++L HSEKLAIAFGL+STP + LR++KNLRVC+DCH+A
Sbjct: 842 AGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTA 901
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+ R+I++RD++R+HHF G CSC DYW
Sbjct: 902 TKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 172/659 (26%), Positives = 296/659 (44%), Gaps = 150/659 (22%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARII--KCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
Y LLQ+ + R G+ +HA I+ + LH FL + L+ +AK +++ A+ + D
Sbjct: 46 YGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADR 105
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
S Y S T +I + E GR A+ +F
Sbjct: 106 FA-----------SVY----------------------SCTAMIRAWMEHGRPDKAMELF 132
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M +V P + +++ +C+ LG+L+AG+++HS + + N+L++MY+K
Sbjct: 133 DRM---EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKC 189
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G + AK FD RL S +RDVVTWN+MI+ +
Sbjct: 190 GSLIDAKQAFD--RLPRAS--------------------------KRDVVTWNAMISAFL 221
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC--ANLEKLKLGKQIHAYI------- 304
+NG EAL +F +M +D + P+ T S L +C A L L+ + IH I
Sbjct: 222 RNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 281
Query: 305 ---IRTEF-DATGPVGN------------------ALISCYAKVGGV------------- 329
+RT D+ G +G+ +L++C A +
Sbjct: 282 EAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLF 341
Query: 330 -EIAQKIVEQSGISYLNVI------------AF------------------TTLLDGYIK 358
+ + + SG++ ++V+ AF TTLL Y +
Sbjct: 342 FAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYAR 401
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
D+ AR FD+++ DVV+W AM Y Q+ +++A+ LF M+ EG +P+ T
Sbjct: 402 SNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITA 461
Query: 419 LSVSSSLASLDH---GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH- 474
L+ ++ GK+I + +G +V+NA + MY+K G++ AR VF I
Sbjct: 462 LTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISP 521
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGLVEQG 533
R++ ++W SM+ A HGLG+EA +LF+ M E +KP+ +T+V VL A T + QG
Sbjct: 522 ARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG 581
Query: 534 QRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN-FIENMPLEPDVVAWGSLLS 590
+ + ++ N + + +++++ + G L +A F ++ + DV+AW SL++
Sbjct: 582 REIHARVVSNGFESDTVIQN--ALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIA 638
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 226/510 (44%), Gaps = 94/510 (18%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV--KTGLSGCVNVTNSLLNMYAKV 193
++ DQ T +L +C L L G+++H+ ++ + L + + L+ M+AK
Sbjct: 34 IIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKC 93
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G+ A+A+ D R +V S ++ + GR D A FD+M
Sbjct: 94 GNLAEAEALAD--RFASVYSCTAMIRAWMEHGRPDKAMELFDRM---------------- 135
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
++P+ L + ++AC+ L L G++IH+ I +F+
Sbjct: 136 -------------------EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENS 176
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL- 372
+GNALIS Y+K G +L+D A++ FD L
Sbjct: 177 VLGNALISMYSKCG-----------------------SLID----------AKQAFDRLP 203
Query: 373 --RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG-PKPNNYTLSAMLS--VSSSLAS 427
RDVV W AM+ + +NG ++A++LFR M R+G P PN+ T ++L V + L S
Sbjct: 204 RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLS 263
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET----VSWT 483
L+ + IH + +G V AL+ Y K G+++ A VF L +E V+ +
Sbjct: 264 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF-LRKGDEEPSTSLVTCS 322
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI A Q+G +E+++LF M G KP +T V VL AC+ +++ G +++
Sbjct: 323 AMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS---MLQVGSATAFVLEQA 379
Query: 544 HKIKPTPSHFASMVDLL---GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
++ LL R+ L A + + PDVV+W ++ +A H
Sbjct: 380 MEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQ-SPDVVSWNAMAAAYLQHHRSRE 438
Query: 601 GKIAAEKLLL--IEPDNSGAYSAL--CNLY 626
+ E++LL + P + +AL C Y
Sbjct: 439 ALVLFERMLLEGVRPSVATFITALTACAAY 468
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/562 (40%), Positives = 341/562 (60%), Gaps = 34/562 (6%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
S + A F+Q+ ++ TWN+MI G++++ A+ +F+ M SS+ PD T
Sbjct: 82 SAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPF 141
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
A A L + LG+ IH+ ++R FD+ V N+L+ Y+
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSV------------------ 183
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+G + A ++F+ + RD VAW +++ G+ NG+ +A+ L+R M
Sbjct: 184 ---------------LGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM 228
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
EG +P+ +T+ ++LS L +L G+++H ++ G + SNAL+ +YSK GN
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A++VF+ + R VSWTS+IV LA +GLG EA++LF + G+KP IT+VGVL A
Sbjct: 289 RDAQKVFDEMEERS-VVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYA 347
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H G++++G Y+ MK + I P H MVDLL RAG + +AY++I NMP+ P+ V
Sbjct: 348 CSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAV 407
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
W +LL AC +H +L+LG++A ++ +E +SG + L NLY+S +W D N+RK M
Sbjct: 408 IWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIML 467
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
GVKKT G+S V+++N+V+ F + D HPQ + Y +AKI +K G+VP T +VL
Sbjct: 468 MKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLA 527
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
D+EE+ KE L HH+EK+AIAF L++TP T +RIMKNLRVC DCH AIK I K+ +REI
Sbjct: 528 DIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREI 587
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRD +RFHHFK G CSC+DYW
Sbjct: 588 IVRDRSRFHHFKDGSCSCKDYW 609
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/547 (25%), Positives = 221/547 (40%), Gaps = 114/547 (20%)
Query: 33 KLVHARIIKCGL--HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
K +HA I+ G+ F K+ + + + +S+A ++F+++ + +WNT++ +A
Sbjct: 52 KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ A E+F+ M S +LP T
Sbjct: 112 ESENPSPAVELFSQMHAASS------------------------------ILPDTHTFPF 141
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ + L D+S G+ +HS VV+ G V NSL++MY+ +G A VF+ M
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSY-- 199
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
RD V WNS+I G++ NG EAL ++ M
Sbjct: 200 -----------------------------RDRVAWNSVINGFALNGMPNEALTLYREM-G 229
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
++PD FT+ S LSAC L L LG+++H Y+++ NAL+ Y+K G
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
AQK +FD + +R VV+WT+++VG N
Sbjct: 290 DAQK---------------------------------VFDEMEERSVVSWTSLIVGLAVN 316
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSV 449
GL +A++LF + R+G KP+ T +L S LD G G +
Sbjct: 317 GLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEH 376
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERML 506
++ + +AG + A + V W +++ A HG LGE A +R L
Sbjct: 377 HGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQR-L 435
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
E D + + L A L Q R +MK V K TP + S+V+L R
Sbjct: 436 EQRHSGDFV-LLSNLYASERRWLDVQNVRKIMLMKGVKK---TPGY--SLVELKNR---- 485
Query: 567 QEAYNFI 573
Y FI
Sbjct: 486 --VYEFI 490
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 63/290 (21%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
S++ + L ++ K + +G+ +H+ +++ G F++NSL++ Y+ S+ A
Sbjct: 131 SILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSA 190
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+VF+ M + +WN++++ +A G MPN
Sbjct: 191 YQVFEIMSYRDRVAWNSVINGFALNG-----------MPN-------------------- 219
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+ ++ EM + V P FT+ S+L++C LG L+ G++VH ++VK GL + +N+LL
Sbjct: 220 EALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALL 279
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
++Y+K G+ A+ VFD +M ER VV+W S
Sbjct: 280 DLYSKCGNFRDAQKVFD-------------------------------EMEERSVVSWTS 308
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
+I G + NG EAL +F L+ LKP + T L AC++ L G
Sbjct: 309 LIVGLAVNGLGNEALKLFGE-LERQGLKPSEITFVGVLYACSHCGMLDEG 357
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 54/224 (24%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH ++K GL + N+L++ Y+K + A+KVFDEM +++ SW +++ A
Sbjct: 255 LGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLA 314
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G +G A+++F E+ + + P++ T
Sbjct: 315 VNG-----------------------------LG--NEALKLFGELERQGLKPSEITFVG 343
Query: 151 VLASCTALGDLSAG-------KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
VL +C+ G L G K+ + + + GC+ LL KVGD +
Sbjct: 344 VLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCM---VDLLCRAGKVGD------AY 394
Query: 204 DGMR----LKNVSSWNVVV---SLHIHSGRLDLARAQFDQMIER 240
D +R N W ++ ++H H ++ARA+ ++ +R
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQR 438
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/582 (39%), Positives = 360/582 (61%), Gaps = 15/582 (2%)
Query: 206 MRLKNVSSWN-VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M LK +WN V+ + G+L A+ F ++ E D V++N+M++ Y +N A
Sbjct: 1 MTLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAF 60
Query: 265 FANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F +M +KD+ P T+ + + ++K + ++I + NA+IS Y
Sbjct: 61 FEDMPIKDT---PSWNTMITGFAQNQQMDKAR-----DLFLIMPTKNVV--TWNAMISGY 110
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+ G ++ A K+ E++ + +V+A+T ++ GY+K+G IG A R+F+ + ++++V W AM
Sbjct: 111 VECGDLDSALKLFEKA--PFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAM 168
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ GY +N +D V+LFR+MV G +PN+ TLS+ L S L++L G+Q+H +S
Sbjct: 169 IAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPL 228
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ +LI+MY K G + ++F + R++ V+W +MI AQHG G++A+ LF+
Sbjct: 229 CDDTTAGTSLISMYCKCGVLEDGWKLFVQVP-RRDVVTWNAMISGYAQHGEGKKALGLFD 287
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M+E G+KPD IT+V VL AC H G + G +Y++ M + + P H+ MVDLLGRA
Sbjct: 288 EMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRA 347
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L EA + IE MP +P +G+LL ACR+HKN ++ + A++KLL ++P ++ Y L
Sbjct: 348 GKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDPASATGYVQLA 407
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y++ +W+ A +RKSMK V KT G+SW+++++ H F D HP+ +I+ K+
Sbjct: 408 NVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHPELASIHGKLK 467
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
++ ++K G+VPD LHDV E+ KEQ+L HSEKLAIA+GLI P T +R+ KNLR
Sbjct: 468 ELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLR 527
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCH AIK+I ++ REI+VRD TRFHHFK G CSC DYW
Sbjct: 528 VCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 182/378 (48%), Gaps = 49/378 (12%)
Query: 44 LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN 103
L +V + L K + A+++F ++P S+NT+LS Y + ++ A F
Sbjct: 3 LKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFE 62
Query: 104 LMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSA 163
MP +D+ SW T+I + + + A +F+ ++PT+ VT
Sbjct: 63 DMPIKDTPSWNTMITGFAQNQQMDKARDLFL------IMPTKNVVT-------------- 102
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
N++++ Y + GD A +F+ K+V +W +++ ++
Sbjct: 103 -------------------WNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMK 143
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
GR+ LA F++M E+++VTWN+MIAGY +N + + +F M+ ++P+ TL+S
Sbjct: 144 LGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMV-GFGIQPNSSTLSS 202
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L C+ L L+LG+Q+H + ++ G +LIS Y K G +E K+ Q +
Sbjct: 203 ALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQ--VPR 260
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVEL 399
+V+ + ++ GY + G+ A +FD + ++ D + + A+L+ G V+
Sbjct: 261 RDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKY 320
Query: 400 FRSMVREG---PKPNNYT 414
F SM ++ KP++YT
Sbjct: 321 FHSMAKDYGLVAKPDHYT 338
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH + K L SL++ Y K + K+F ++P + + +WN ++S YA
Sbjct: 215 LGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYA 274
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL---P 143
+ G A +F+ M + D +++ +++ N G ++ F M +D L P
Sbjct: 275 QHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKP 334
Query: 144 TQFT 147
+T
Sbjct: 335 DHYT 338
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/648 (38%), Positives = 373/648 (57%), Gaps = 40/648 (6%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + L +C A G+L G+++HS VV +GL+ + ++NSL+NMY K D A+ V
Sbjct: 8 PDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKV 67
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FDGM L++V SW +++++ +G A F+ M +D V+WN++I N +AL
Sbjct: 68 FDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDAL 127
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA-TGPVGNALIS 321
+F M + L+ ++FTL S L AC LE LKL +QIHA F + VGN++++
Sbjct: 128 ELFHGM-ELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVN 186
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YA+ G +LLD ++ FDSL ++ +VAW+
Sbjct: 187 MYARCG-----------------------SLLD----------TKKAFDSLEEKGLVAWS 213
Query: 382 AMLVGYEQ--NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
ML Y Q +G + A + F+ M EG KP T + L +++A+L+HG+ +H A
Sbjct: 214 IMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAA 273
Query: 440 RSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
SG +SL + N +I MY K G+ + A+ VF+ + + +SW S+IVA A +G EA
Sbjct: 274 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP-EKCLISWNSLIVAYAHNGHALEA 332
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ + ML G PD T V +L +H GL+E+G ++ H ++P+ +VD
Sbjct: 333 LSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVD 392
Query: 559 LLGRAGLLQEAYNFIENMP-LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
LL R G L A I P + D +AW +LL+AC+ + + G AE++ +EP +SG
Sbjct: 393 LLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSG 452
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
++ L NLY+S G+W DA+ IRK M+ + VKK G SW+++ VH F + HP+
Sbjct: 453 SFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIRE 512
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
I ++ K+ ++E G+VPDT +V+HDVEE KE++L HSE+LAI FGL+ST T+R
Sbjct: 513 ICEELEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIR 572
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++KNLRVC+DCH+A K I +V REIVVRD++RFHHFK G CSC D+W
Sbjct: 573 VVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 620
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 73/489 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+ ++ GL ++ + NSL+N Y K + + A+KVFD M ++ + SW +L+ YA+
Sbjct: 29 GRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQ 88
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A VF MP +D VSW +I +F++A+ +F M + + +FT+ S+
Sbjct: 89 NGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSL 148
Query: 152 LASCTALGDLSAGKKVH-SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L +C L DL +++H V NS++NMYA+ G + K FD +
Sbjct: 149 LEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLE--- 205
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ--NGYDFEALGMFANM 268
E+ +V W+ M+A Y+Q +G A F M
Sbjct: 206 ----------------------------EKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEM 237
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV-GNALISCYAKVG 327
+ +KP + T S L ACA + L+ G+ +H + F T V GN +I+ Y K G
Sbjct: 238 -EAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCG 296
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
A+ +FD + ++ +++W +++V Y
Sbjct: 297 SPS---------------------------------DAKLVFDQMPEKCLISWNSLIVAY 323
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
NG +A+ + M+ +G P++ T ++L S L+ G + S+++ G S
Sbjct: 324 AHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPS 383
Query: 447 LSVSNALITMYSKAGNINAARR-VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
L+ + ++ G ++AA + + +T++W +++ A +G + I+ ER+
Sbjct: 384 SGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERV 443
Query: 506 LELGIKPDH 514
EL +P H
Sbjct: 444 FEL--EPQH 450
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 194/384 (50%), Gaps = 11/384 (2%)
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PDK L ACA +L G+QIH+ ++ + + + N+L++ Y K V A+K
Sbjct: 7 RPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEK 66
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + G+ +V+++T +L Y + G A +F+++ +D V+W A++ N +
Sbjct: 67 VFD--GMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQ 124
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH-ASALRSGEASSLSVSNAL 453
DA+ELF M EG + N +TL ++L L L +QIH +A +S +V N++
Sbjct: 125 DALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSV 184
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ--HGLGEEAIQLFERMLELGIK 511
+ MY++ G++ ++ F+ + + V+W+ M+ A AQ G G A + F+ M GIK
Sbjct: 185 VNMYARCGSLLDTKKAFDSLE-EKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIK 243
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P +T+V L AC +E G+ + ++ + +++++ G+ G +A
Sbjct: 244 PGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKL 303
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE---PDNSGAYSALCNLYSS 628
+ MP E +++W SL+ A H L +++ + +L++ PD+ + S L L +
Sbjct: 304 VFDQMP-EKCLISWNSLIVA-YAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHA 361
Query: 629 CGKWEDAANIRKSMKYVGVKKTQG 652
+ R S++ G++ + G
Sbjct: 362 GLLERGVEHFRSSIQDHGLEPSSG 385
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 37/222 (16%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M EG +P+ L ++ LDHG+QIH+S + SG S++ +SN+L+ MY K +
Sbjct: 1 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM----------------- 505
+ A +VF+ + R + VSWT+M+ AQ+G +A+ +FE M
Sbjct: 61 VPCAEKVFDGMLLR-DVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVG 119
Query: 506 -------LEL-------GIKPDHITYVGVLTACTHGGL--VEQGQRYYNMMKNVHKIKPT 549
LEL G++ + T + +L AC GGL ++ ++ + +
Sbjct: 120 NSKFQDALELFHGMELEGLRSNEFTLLSLLEAC--GGLEDLKLARQIHARAAAGGFGGNS 177
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ S+V++ R G L + +++ E +VAW +L+A
Sbjct: 178 TAVGNSVVNMYARCGSLLDTKKAFDSLE-EKGLVAWSIMLAA 218
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/783 (32%), Positives = 428/783 (54%), Gaps = 92/783 (11%)
Query: 7 PSLISPLE--FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
P L + +E +Y LLQ + +++H I+K G H +F+ L+N Y+K
Sbjct: 56 PKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKC--- 112
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
G ++ A +VF+ +P R+ +WTT++ Y +
Sbjct: 113 ----------------------------GVMESAHKVFDNLPRRNVNAWTTLLTGYVQNS 144
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
A+++F++M++ P+ +T+ VL +C++L + GK+VH++++K + ++ N
Sbjct: 145 HPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGN 204
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
SL + Y+K RL+ A F + E+DV++
Sbjct: 205 SLSSFYSKFR-------------------------------RLEFAIKAFKIIKEKDVIS 233
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W S+I+ NG +L F +ML D +KP+++TL S LSAC + L LG QIH+
Sbjct: 234 WTSVISSCCDNGQAARSLSFFMDMLSDG-MKPNEYTLTSVLSACCVMLTLDLGAQIHSLS 292
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
I+ + ++ + N+++ Y K G + AQK+ E G+ LN++ + ++ G+ K+ D
Sbjct: 293 IKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFE--GMETLNLVTWNAMIAGHAKMMD--- 347
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
L + DV A + A+ +F+ + R G KP+ +T S++LSV S+
Sbjct: 348 -------LAEDDVAAHKS----------GSTALAMFQKLYRSGMKPDLFTFSSVLSVCSN 390
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +L+ G+QIH ++SG + + V AL++MY+K G+I+ A + F + R +SWTS
Sbjct: 391 LVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT-MISWTS 449
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI A+HGL ++A+QLFE M +GIKP+ +T+VGVL+AC+H GL ++ Y+ +M+ +
Sbjct: 450 MITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQY 509
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
IKP HFA ++D+ R G ++EA++ + M EP+ W L++ CR H DLG A
Sbjct: 510 NIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYA 569
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AE+LL ++P + Y +L N++ S G+W+D + +RK MK V K + +SW+ I+ KV+
Sbjct: 570 AEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYS 629
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH---HSEKL 721
F D H Q +Y + + +E+K +G+ P V +E+ +E++L HSEKL
Sbjct: 630 FKPNDKSHCQSLEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKL 688
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AIAFGL++ P T +R++K++ +C DCH+ I+FI L REIV+RD+ + H F G CSC
Sbjct: 689 AIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSC 748
Query: 782 RDY 784
Y
Sbjct: 749 GGY 751
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/561 (41%), Positives = 339/561 (60%), Gaps = 8/561 (1%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
GRLD + A F + V W ++I G++ G +AL +A ML ++P+ FT +S
Sbjct: 23 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLT-QGVEPNAFTFSSI 81
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C ++ GK +H+ ++ FD+ V L+ YA+ G V AQ++ + +
Sbjct: 82 LKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDT--MPEK 135
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
++++ T +L Y K G++ AR +FD + +RD V W M+ GY QNG+ +A+ LFR M+
Sbjct: 136 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML 195
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+ KPN T+ ++LS L +L+ G+ +H+ +G ++ V AL+ MYSK G++
Sbjct: 196 KAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLE 255
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AR VF+ I ++ V+W SMIV A G +EA+QLF+ M +G+ P +IT++G+L+AC
Sbjct: 256 DARLVFDKID-DKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
H G V +G +N MK+ + I+P H+ MV+LLGRAG +++AY ++NM +EPD V
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
WG+LL ACR+H + LG+ E L+ NSG Y L N+Y++ G W+ A +R MK
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
GVKK G S +++ NKVH F HP+R IY + +I +K G+ P T VLHD
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+ E KE+ L HSEKLAIAFGLI+T TT++I+KNLRVC DCH K I K+ R+IV
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
VRD RFHHF G CSC DYW
Sbjct: 555 VRDRNRFHHFVNGSCSCGDYW 575
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 204/419 (48%), Gaps = 42/419 (10%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+YA GRLD + +F N WT II + G + A+ + +M+ V P FT
Sbjct: 18 SYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT 77
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S+L C + GK +HS VK G + V LL++YA+ GD + A+ +FD M
Sbjct: 78 FSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K++ S +++ + G LD AR FD M ERD V WN MI GY+QNG EAL +F
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
MLK + KP++ T+ S LSAC L L+ G+ +H+YI VG AL+ Y+K G
Sbjct: 194 MLK-AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A R +FD + D+DVVAW +M+VGY
Sbjct: 253 SLEDA---------------------------------RLVFDKIDDKDVVAWNSMIVGY 279
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRSGEASS 446
G +++A++LF+SM R G P N T +LS + G I + G
Sbjct: 280 AMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 339
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLF 502
+ ++ + +AG++ A + ++ + V W +++ A HG LGE+ ++L
Sbjct: 340 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELL 398
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 59/414 (14%)
Query: 13 LEFYAHLLQSNLKSRNPFV------------GKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
L FYA +L ++ N F GK +H++ +K G ++++ L++ YA+
Sbjct: 60 LNFYAQMLTQGVEP-NAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYAR 118
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ A+++FD MP K+L S +L+ YAK G LD A +F+ M RD V W +I Y
Sbjct: 119 GGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGY 178
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+ G A+ +F M++ + P + TV SVL++C LG L +G+ VHS++ G+ V
Sbjct: 179 TQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNV 238
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+V +L++MY+K G A+ VFD ++ ++
Sbjct: 239 HVGTALVDMYSKCGSLEDARLVFD-------------------------------KIDDK 267
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG--- 297
DVV WNSMI GY+ G+ EAL +F +M + L P T LSAC + + G
Sbjct: 268 DVVAWNSMIVGYAMXGFSQEALQLFKSMCR-MGLHPTNITFIGILSACGHSGWVTEGWDI 326
Query: 298 --KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
K Y I + + G +++ + G VE A ++V+ I + + + TLL
Sbjct: 327 FNKMKDEYGIEPKIEHYG----CMVNLLGRAGHVEQAYELVKNMNIE-PDPVLWGTLLGA 381
Query: 356 YIKIGDIGPARRIFDSLRDRDVV-AWTAMLVG--YEQNGLNKDAVELFRSMVRE 406
G I +I + L D+++ + T +L+ Y G N D V R+M+++
Sbjct: 382 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG-NWDGVARLRTMMKD 434
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 136/274 (49%), Gaps = 38/274 (13%)
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+ L Y +G + + +F ++ V WTA++ G+ GL++ A+ + M+ +
Sbjct: 10 VPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQ 69
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS---------------- 450
G +PN +T S++L L ++ GK +H+ A++ G S L V
Sbjct: 70 GVEPNAFTFSSIL----KLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSA 125
Query: 451 ---------------NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A++T Y+K G ++AAR +F+ + R + V W MI Q+G+
Sbjct: 126 QQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEER-DGVCWNVMIDGYTQNGMP 184
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA+ LF RML+ KP+ +T + VL+AC G +E G+ ++ ++N + I+ +
Sbjct: 185 NEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN-NGIQFNVHVGTA 243
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+VD+ + G L++A + + + DVVAW S++
Sbjct: 244 LVDMYSKCGSLEDARLVFDKID-DKDVVAWNSMI 276
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/562 (40%), Positives = 340/562 (60%), Gaps = 34/562 (6%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
S + A F+Q+ ++ TWN+MI G++++ A+ +F+ M SS+ PD T
Sbjct: 82 SAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPF 141
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
A A L + LG+ IH+ ++R FD+ V N+L+ Y+ G E
Sbjct: 142 LFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAE------------- 188
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
A ++F+ + RD VAW +++ G+ NG+ +A+ L+R M
Sbjct: 189 --------------------SAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM 228
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
EG +P+ +T+ ++LS L +L G+++H ++ G + SNAL+ +YSK GN
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A++VF+ + R VSWTS+IV LA +GLG EA++LF + G+KP IT+VGVL A
Sbjct: 289 RDAQKVFDEMEERS-VVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYA 347
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H G++++G Y+ MK + I P H MVDLL RAG + +AY++I NMP+ P+ V
Sbjct: 348 CSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAV 407
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
W +LL AC +H +L+LG++A ++ +E +SG + L NLY+S +W D N+RK M
Sbjct: 408 IWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIML 467
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
GVKKT G+S V+++N+V+ F + D HPQ + Y +AKI +K G+VP T +VL
Sbjct: 468 MKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLA 527
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
D+EE+ KE L HH+EK+AIAF L++TP T +RIMKNLRVC DCH AIK I K+ +REI
Sbjct: 528 DIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREI 587
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRD +RFHHFK G CSC+DYW
Sbjct: 588 IVRDRSRFHHFKDGSCSCKDYW 609
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 200/484 (41%), Gaps = 83/484 (17%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLA 153
+ A ++FN + + +W T+I + E A+ +F +M +LP T +
Sbjct: 85 MSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFK 144
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+ L D+S G+ +HS VV+ G V NSL++MY+ G A VF+ M
Sbjct: 145 AVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSY----- 199
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
RD V WNS+I G++ NG EAL ++ M
Sbjct: 200 --------------------------RDRVAWNSVINGFALNGMPNEALTLYREM-GSEG 232
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
++PD FT+ S LSAC L L LG+++H Y+++ NAL+ Y+K G AQ
Sbjct: 233 VEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQ 292
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
K +FD + +R VV+WT+++VG NGL
Sbjct: 293 K---------------------------------VFDEMEERSVVSWTSLIVGLAVNGLG 319
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSVSNA 452
+A++LF + R+G KP+ T +L S LD G G +
Sbjct: 320 NEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGC 379
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERMLELG 509
++ + +AG + A + V W +++ A HG LGE A +R LE
Sbjct: 380 MVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQR-LEQR 438
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
D + + L A L Q R +MK V K TP + S+V+L R
Sbjct: 439 HSGDFV-LLSNLYASERRWLDVQNVRKIMLMKGVKK---TPGY--SLVELKNR------V 486
Query: 570 YNFI 573
Y FI
Sbjct: 487 YEFI 490
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 109/215 (50%), Gaps = 32/215 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++ Y+ G + A +VF +M RD V+W ++I + G A+ ++ EM + V
Sbjct: 175 NSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVE 234
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT+ S+L++C LG L+ G++VH ++VK GL + +N+LL++Y+K G+ A+ V
Sbjct: 235 PDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKV 294
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD +M ER VV+W S+I G + NG EAL
Sbjct: 295 FD-------------------------------EMEERSVVSWTSLIVGLAVNGLGNEAL 323
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
+F L+ LKP + T L AC++ L G
Sbjct: 324 KLFGE-LERQGLKPSEITFVGVLYACSHCGMLDEG 357
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 54/224 (24%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH ++K GL + N+L++ Y+K + A+KVFDEM +++ SW +++ A
Sbjct: 255 LGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLA 314
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G +G A+++F E+ + + P++ T
Sbjct: 315 VNG-----------------------------LG--NEALKLFGELERQGLKPSEITFVG 343
Query: 151 VLASCTALGDLSAG-------KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
VL +C+ G L G K+ + + + GC+ LL KVGD +
Sbjct: 344 VLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCM---VDLLCRAGKVGD------AY 394
Query: 204 DGMR----LKNVSSWNVVV---SLHIHSGRLDLARAQFDQMIER 240
D +R N W ++ ++H H ++ARA+ ++ +R
Sbjct: 395 DYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQR 438
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/559 (40%), Positives = 341/559 (61%), Gaps = 35/559 (6%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+ A F Q+ ++ TWN+MI GY+++ AL ++ M S ++PD T L
Sbjct: 90 MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQM-HVSCIEPDTHTYPFLLK 148
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
A A L ++ G+++H+ IR F++ V N L+ YA G E A K+
Sbjct: 149 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKL----------- 197
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
F+ + +R++V W +++ GY NG +A+ LFR M
Sbjct: 198 ----------------------FELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 235
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G +P+ +T+ ++LS + L +L G++ H ++ G +L NAL+ +Y+K G+I A
Sbjct: 236 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA 295
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+VF+ + + VSWTS+IV LA +G G+EA++LF+ + G+ P IT+VGVL AC+H
Sbjct: 296 HKVFDEME-EKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSH 354
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
G+V++G Y+ MK + I P H+ MVDLLGRAGL+++A+ FI+NMP++P+ V W
Sbjct: 355 CGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWR 414
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LL AC +H +L LG++A +LL +EP +SG Y L NLY+S +W D +R++M G
Sbjct: 415 TLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREG 474
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
VKKT G S V+++N++H F + D HPQ + IY K+A+I +K G+VP ++VL D+E
Sbjct: 475 VKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIE 534
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E+ KE L +HSEK+AIAF LI+T +R++KNLRVC DCH AIK I K+ DREIVVR
Sbjct: 535 EEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVR 594
Query: 767 DATRFHHFKKGLCSCRDYW 785
D +RFHHFK G CSC+DYW
Sbjct: 595 DRSRFHHFKDGHCSCKDYW 613
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 204/481 (42%), Gaps = 94/481 (19%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ A ++F+ + N + +W T+I Y E A+ ++ +M + P T +L +
Sbjct: 90 MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA 149
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
L D+ G+KVHS ++ G V V N+L++MYA G A +F+ M +N+ +W
Sbjct: 150 IAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTW 209
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N S+I GY+ NG EAL +F M +
Sbjct: 210 N-------------------------------SVINGYALNGRPNEALTLFREM-GLRGV 237
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+PD FT+ S LSACA L L LG++ H Y+++ D GNAL+ YAK G + A K
Sbjct: 238 EPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHK 297
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+FD + ++ VV+WT+++VG NG K
Sbjct: 298 ---------------------------------VFDEMEEKSVVSWTSLIVGLAVNGFGK 324
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNAL 453
+A+ELF+ + R+G P+ T +L S +D G G + +
Sbjct: 325 EALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCM 384
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERMLELGI 510
+ + +AG + A + + V W +++ A HG LGE A R L +
Sbjct: 385 VDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVA-----RAQLLQL 439
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK---------IKPTPSHFASMVDLLG 561
+P H +L+ L QR+ +VHK +K TP H S+V+L
Sbjct: 440 EPKHSGDYVLLS-----NLYASEQRW----SDVHKVRRTMLREGVKKTPGH--SLVELRN 488
Query: 562 R 562
R
Sbjct: 489 R 489
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 177/404 (43%), Gaps = 80/404 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL++ K + G+ VH+ I+ G VF++N+L++ YA A K+F+ M
Sbjct: 143 YPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMA 202
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ L +WN++++ YA GR PN A+ +F E
Sbjct: 203 ERNLVTWNSVINGYALNGR-----------PN--------------------EALTLFRE 231
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M V P FT+ S+L++C LG L+ G++ H ++VK GL G ++ N+LL++YAK G
Sbjct: 232 MGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGS 291
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A VFD M E+ VV+W S+I G + N
Sbjct: 292 IRQAHKVFDEME-------------------------------EKSVVSWTSLIVGLAVN 320
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG-----KQIHAYIIRTEFD 310
G+ EAL +F L+ L P + T L AC++ + G + Y I + +
Sbjct: 321 GFGKEALELFKE-LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIE 379
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL-----DGYIKIGDIGPA 365
G ++ + G V+ A + ++ + N + + TLL G++ +G++ A
Sbjct: 380 HYG----CMVDLLGRAGLVKQAHEFIQNMPMQ-PNAVVWRTLLGACTIHGHLALGEVARA 434
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
+ + + + L EQ D ++ R+M+REG K
Sbjct: 435 QLLQLEPKHSGDYVLLSNLYASEQRW--SDVHKVRRTMLREGVK 476
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/591 (38%), Positives = 357/591 (60%), Gaps = 35/591 (5%)
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGR-LDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A A+F + ++ S N ++S S R L AR FD+M +RD W+++++GY+++G
Sbjct: 82 ALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQ 141
Query: 258 DFEALGMFANMLKD--SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
AL ++ M ++ + ++FT +S L+A A + G+++H +++R DA G
Sbjct: 142 PEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAG-- 199
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G+A++ ++ L D Y K G + ARR+FD + R
Sbjct: 200 GDAVL----------------------------WSALADMYAKCGRVDDARRVFDRMPVR 231
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D V+WTAM+ Y G + LF M+R G +PN +T + +L + A G+Q+
Sbjct: 232 DAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQV 291
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +SG S +AL+ MYSK G++ +A RVF + + + VSWT++I AQ+G
Sbjct: 292 HGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMA-KPDLVSWTAVISGYAQNGQ 350
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EEA++ F+ L GIKPDH+T+VGVL+AC H GLV++G ++ +K + I+ T H+A
Sbjct: 351 PEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYA 410
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
++DLL R+G + A I NM ++P+ W SLL CR+HKN+ L + AAE L IEP+
Sbjct: 411 CVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPE 470
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N Y L N+Y+S G +++ ++R+ M+ G+ K SW+++ +VHVF V D HP+
Sbjct: 471 NPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPK 530
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
D IY + K++ ++ E G+V D VLHDVE++ KEQ + +HSE+LA+AFG+I+TPE +
Sbjct: 531 ADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGS 590
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++ KNLR+C DCH+AIK I ++V R+I+VRD+ RFHHFK G+CSCRDYW
Sbjct: 591 PIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 231/510 (45%), Gaps = 84/510 (16%)
Query: 47 SVFLKNSLMNFYAK-TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR-LDLACEVFNL 104
S L N L++ + ++ A +F + +CS NT++SA ++ R L A E+F+
Sbjct: 61 STVLSNRLLHLLSSHPATLPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDR 120
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD---QVLPTQFTVTSVLASCTALGDL 161
MP RD +W+ ++ Y G+ + A+ ++ M ++ +FT +S LA+ A
Sbjct: 121 MPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCG 180
Query: 162 SAGKKVHSFVVKTGL---SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
AG+++H VV+ G+ G + ++L +MYAK G A+ VFD M +++ SW
Sbjct: 181 RAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTA-- 238
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
M+ER Y G E +F +ML+ ++P++
Sbjct: 239 ------------------MVER-----------YFDGGRGGEGFRLFLHMLRTRGVRPNE 269
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
FT A L ACA G+Q+H + ++ TG SC+A+
Sbjct: 270 FTYAGVLRACAQFAVESFGRQVHGRMAKS---GTGD------SCFAE------------- 307
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+ LL Y K GD+G A R+F+++ D+V+WTA++ GY QNG ++A+
Sbjct: 308 -----------SALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALR 356
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRSGEASSLSVSNALITMY 457
F +R G KP++ T +LS + +D G +I H+ + + +I +
Sbjct: 357 YFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLL 416
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQ-LFERMLELGIKPD 513
S++G A ++ + + W S++ H GL A + LFE I+P+
Sbjct: 417 SRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFE------IEPE 470
Query: 514 H-ITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+ TYV + GL ++ + +M++
Sbjct: 471 NPATYVTLANIYASVGLFDEVEDVRRIMES 500
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF YA +L++ + G+ VH R+ K G S F +++L+ Y+K + A
Sbjct: 265 VRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAV 324
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+VF+ M L SW ++S YA+ G+ +
Sbjct: 325 RVFEAMAKPDLVSWTAVISGYAQNGQPE-------------------------------E 353
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNSLL 187
A+R F ++ + P T VL++C G + G ++ HS + + + ++
Sbjct: 354 ALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVI 413
Query: 188 NMYAKVGDEMMAKAVFDGMRLK 209
++ ++ G A+ + M +K
Sbjct: 414 DLLSRSGQFERAEKMIGNMAVK 435
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/661 (36%), Positives = 381/661 (57%), Gaps = 12/661 (1%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+LS YA A V +L+P + S++T+I +++ +F +A+ F +M+ ++P
Sbjct: 54 LLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPD 113
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ S + +C L L ++VH +G V +SL++MY K A VFD
Sbjct: 114 NRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFD 173
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
M +V SW+ +V+ + G +D A+ F +M ++ ++++WN MIAG++ +G E
Sbjct: 174 RMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSE 233
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ MF +M +PD T++S L A +LE L +G IH Y+I+ + V +ALI
Sbjct: 234 AVLMFLDM-HLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----D 376
Y K ++ +Q + +++V + + G + G + + R+F L+D+ +
Sbjct: 293 DMYGKCSCTSEMSQVFDQ--MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELN 350
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+WT+M+ QNG + +A+ELFR M G KPN+ T+ +L ++A+L HGK H
Sbjct: 351 VVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHC 410
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+LR G ++ + V +ALI MY+K G I A+R F+ I + V W ++I A HG +
Sbjct: 411 FSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN-LVCWNAVIAGYAMHGKAK 469
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
EA+++F+ M G KPD I++ VL+AC+ GL E+G Y+N M + + I+ H+A M
Sbjct: 470 EAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACM 529
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
V LL RAG L++AY I MP+ PD WG+LLS+CRVH N+ LG++AAEKL +EP N
Sbjct: 530 VTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNP 589
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y+S G W + +R MK G++K G SW++++NKVH+ D HPQ
Sbjct: 590 GNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMT 649
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I + K+ E+K++G+ P+ VL DVEE KEQ+L HSEKLA+ FGL++TP L
Sbjct: 650 QIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPL 709
Query: 737 R 737
+
Sbjct: 710 Q 710
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 249/526 (47%), Gaps = 56/526 (10%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
+ VH G F+++SL++ Y K I A +VFD M + SW+ +++AYA+
Sbjct: 133 ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYAR 192
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
QG +D A +F+ M PN +SW +I +N G + A+ MF++M P
Sbjct: 193 QGCVDEAKRLFSEMGDSGVQPNL--ISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDG 250
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
T++SVL + L DL G +H +V+K GL V+++L++MY K VFD
Sbjct: 251 TTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQ 310
Query: 206 MRLKNVSSWNVVVSLHIHSGRLD----LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
M +V S N + +G+++ L R DQ +E +VV+W SMIA SQNG D EA
Sbjct: 311 MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEA 370
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + +KP+ T+ L AC N+ L GK H + +R VG+ALI
Sbjct: 371 LELFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID 429
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G ++ +R FD + +++V W
Sbjct: 430 MYAKCGRIQ---------------------------------ASRICFDGIPTKNLVCWN 456
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK-QIHASALR 440
A++ GY +G K+A+E+F M R G KP+ + + +LS S + G ++ + +
Sbjct: 457 AVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSK 516
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEE 497
G + + ++T+ S+AG + A + + + W +++ + H LGE
Sbjct: 517 YGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEV 576
Query: 498 AIQLFERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKN 542
A E++ EL +P + Y+ + G+ + R +MMKN
Sbjct: 577 AA---EKLFEL--EPSNPGNYILLSNIYASKGMWNEVNRVRDMMKN 617
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 222/490 (45%), Gaps = 78/490 (15%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
Q T+ + L S TA LS ++ H+ ++KTGL ++ LL+ YA
Sbjct: 15 QHTILNCLNSTTA--SLSQTRQAHAHILKTGLFNDTHLATKLLSHYA------------- 59
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
N+ + + L D + E +V +++++I +S+ AL
Sbjct: 60 ----NNMCFADATLVL--------------DLVPEPNVFSFSTLIYAFSKFHQFHHALST 101
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F+ ML L PD L S + ACA L LK +Q+H + FD+ V ++L+ Y
Sbjct: 102 FSQMLT-RGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYI 160
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV----VAW 380
K + A ++ ++ + +V++++ L+ Y + G + A+R+F + D V ++W
Sbjct: 161 KCNQIRDAHRVFDR--MFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISW 218
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
M+ G+ +GL +AV +F M G +P+ T+S++L L L G IH ++
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFN--------------------------LIH 474
G S VS+ALI MY K + +VF+ L
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338
Query: 475 WRQ--------ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+RQ VSWTSMI +Q+G EA++LF M G+KP+ +T +L AC +
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGN 398
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
+ G+ + ++ + T + S ++D+ + G +Q + + +P + ++V W
Sbjct: 399 IAALMHGKAAHCF--SLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTK-NLVCW 455
Query: 586 GSLLSACRVH 595
++++ +H
Sbjct: 456 NAVIAGYAMH 465
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 11/299 (3%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G L+H +IK GL + ++L++ Y K S +VFD+M + S N + +
Sbjct: 268 MGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLS 327
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ G+++ + +F + ++ + VSWT++I ++ GR A+ +F EM V P
Sbjct: 328 RNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSV 387
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T+ +L +C + L GK H F ++ G+S V V ++L++MYAK G ++ FDG+
Sbjct: 388 TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGI 447
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNSMIAGYSQNGYDFEAL 262
KN+ WN V++ + G+ A FD M D++++ +++ SQ+G E
Sbjct: 448 PTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGS 507
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
F +M ++ A ++ + KL +Q +A I R + V AL+S
Sbjct: 508 YYFNSMSSKYGIEARVEHYACMVTLLSRAGKL---EQAYAMIRRMPVNPDACVWGALLS 563
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/783 (32%), Positives = 428/783 (54%), Gaps = 92/783 (11%)
Query: 7 PSLISPLE--FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
P L + +E +Y LLQ + +++H I+K G H +F+ L+N Y+K
Sbjct: 50 PKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKC--- 106
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
G ++ A +VF+ +P R+ +WTT++ Y +
Sbjct: 107 ----------------------------GVMESAHKVFDNLPRRNVNAWTTLLTGYVQNS 138
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
A+++F++M++ P+ +T+ VL +C++L + GK+VH++++K + ++ N
Sbjct: 139 HPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGN 198
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
SL + Y+K RL+ A F + E+DV++
Sbjct: 199 SLSSFYSKFR-------------------------------RLEFAIKAFKIIKEKDVIS 227
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W S+I+ NG +L F +ML D +KP+++TL S LSAC + L LG QIH+
Sbjct: 228 WTSVISSCCDNGQAARSLSFFMDMLSDG-MKPNEYTLTSVLSACCVMLTLDLGAQIHSLS 286
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
I+ + ++ + N+++ Y K G + AQK+ E G+ LN++ + ++ G+ K+ D
Sbjct: 287 IKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFE--GMETLNLVTWNAMIAGHAKMMD--- 341
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
L + DV A + A+ +F+ + R G KP+ +T S++LSV S+
Sbjct: 342 -------LAEDDVAAHKS----------GSTALAMFQKLYRSGMKPDLFTFSSVLSVCSN 384
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +L+ G+QIH ++SG + + V AL++MY+K G+I+ A + F + R +SWTS
Sbjct: 385 LVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT-MISWTS 443
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
MI A+HGL ++A+QLFE M +GIKP+ +T+VGVL+AC+H GL ++ Y+ +M+ +
Sbjct: 444 MITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQY 503
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
IKP HFA ++D+ R G ++EA++ + M EP+ W L++ CR H DLG A
Sbjct: 504 NIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYA 563
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AE+LL ++P + Y +L N++ S G+W+D + +RK MK V K + +SW+ I+ KV+
Sbjct: 564 AEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYS 623
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH---HSEKL 721
F D H Q +Y + + +E+K +G+ P V +E+ +E++L HSEKL
Sbjct: 624 FKPNDKSHCQSLEMYKLLETVLNEVKALGYEP-IEDVEVIEKEENEERVLSSTVLHSEKL 682
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AIAFGL++ P T +R++K++ +C DCH+ I+FI L REIV+RD+ + H F G CSC
Sbjct: 683 AIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSC 742
Query: 782 RDY 784
Y
Sbjct: 743 GGY 745
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/645 (38%), Positives = 375/645 (58%), Gaps = 66/645 (10%)
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
+L++YA+ GD AK VFD M ++ SW ++S SG + A+ FD M ERD++ W
Sbjct: 29 MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAW 88
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLK----PDKFTLASTLSACANLEKLKLGKQIH 301
M+ L F+N ++D+ P++ +A T AN E+ G+ +
Sbjct: 89 TIMLT----------VLATFSN-IEDAKYHFDQMPERDLVAWTAMLAANAER---GQMEN 134
Query: 302 AYIIRTEFDATGPVGN-----ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
A R FD P N +L+S Y + G V+ A ++ + + N++A+T +L GY
Sbjct: 135 A---RETFDQM-PERNLFSWTSLLSAYGRSGDVKAAGRVFDS--MPEWNLVAWTAMLTGY 188
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG------------------------- 391
GD+ A+R FDS+ +RD++AWTAML Y NG
Sbjct: 189 SLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVA 248
Query: 392 ------LNKDAVELFRSMVR-----EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
L +++ ELF M R +G PN T +L S L +L G++IHA+
Sbjct: 249 ALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAE 308
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + L VSNAL+ Y + G + A+ VF+ + R++ +SW+SMI A AQ G +EA++
Sbjct: 309 RGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMR-RRDVISWSSMISAFAQRGRVDEAME 367
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
L+ RML G PD I ++ VL AC++ G+VE ++ + +++PT H+A MVD+L
Sbjct: 368 LYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVL 427
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L++A + + MP P + + ++LSAC+++ +++ G+ AAE + ++P+NS Y
Sbjct: 428 GRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYI 487
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L N+YS+ + +DAA IRK M+ G+KK G SW+++ ++VH F D +HPQRD IY
Sbjct: 488 TLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYA 547
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
++ ++ ++KE G+ DT VL DVEED KE +L +HSEKLAIAFGLISTP LRI+K
Sbjct: 548 EIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVK 607
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC+DCH+A K I K+ REI+VRD RFHHF+ G+CSC DYW
Sbjct: 608 NLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 214/471 (45%), Gaps = 77/471 (16%)
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNL--------- 104
+++ YA++ +S AK VFD MP +L SW +LSA+A G + A +F+
Sbjct: 29 MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLIAW 88
Query: 105 ----------------------MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
MP RD V+WT ++ E G+ +NA F +M + +
Sbjct: 89 TIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNL- 147
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
F+ TS+L++ GD+ A +V + + L ++L Y+ GD + AK
Sbjct: 148 ---FSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAW----TAMLTGYSLSGDVVRAKRA 200
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M +++ +W ++S + +G L R F +M ERD+++W +M+A +N E+
Sbjct: 201 FDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESK 260
Query: 263 GMFANMLKDSSLK----PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
+F M + +L P++ T + L AC+ L L G++IHA + FD V NA
Sbjct: 261 ELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNA 320
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L++ Y + G +G A+ +FD +R RDV+
Sbjct: 321 LVNFYGRCGA---------------------------------LGDAKIVFDGMRRRDVI 347
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W++M+ + Q G +A+EL+ M+ EG P++ ++L S+ ++ S
Sbjct: 348 SWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSI 407
Query: 439 LRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ + +L ++ + +AG + A + L+ + + + +M+ A
Sbjct: 408 VGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSA 458
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 125/234 (53%), Gaps = 9/234 (3%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
+++ Y+ + + AK+ FD MP + L +W +LSAYA G L E+F MP RD +
Sbjct: 182 TAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLI 241
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-----PTQFTVTSVLASCTALGDLSAGKK 166
SW T++ E + + +F M + L P + T ++L +C+ LG L+ G+K
Sbjct: 242 SWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRK 301
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+H+ V + G + V+N+L+N Y + G AK VFDGMR ++V SW+ ++S GR
Sbjct: 302 IHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGR 361
Query: 227 LDLARAQFDQMIER----DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+D A + +M+ D + + S++ S +G + F +++ D+ ++P
Sbjct: 362 VDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEP 415
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA + + G + + N+L+NFY + ++ AK VFD M + + SW++++SA+A+
Sbjct: 299 GRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQ 358
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPT 144
+GR+D A E+++ M + D + + +++ + G + + F +V D QV PT
Sbjct: 359 RGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPT 416
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 266/788 (33%), Positives = 401/788 (50%), Gaps = 103/788 (13%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E P + P F A S LK N VGK V+ ++ G + +K S+++ + K
Sbjct: 184 EGVRPDHFVFPKVFKAC---SELK--NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKC 238
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTII 117
+ A++ F+E+ K + WN ++S Y +G A + + M D V+W II
Sbjct: 239 GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298
Query: 118 VTYNEIGRFKNAIRMFVEM------------------------------------VQDQV 141
Y + G+F+ A + F+EM V + V
Sbjct: 299 SGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGV 358
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAK 200
P T+ S +++CT L L G+++H + +K L + V NSL++ YAK +A+
Sbjct: 359 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 418
Query: 201 AVFDGMRLKNVSSWNVVVSLHI----HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
F ++ ++ SWN +++ + H ++L Q IE D++TWN ++ G++Q G
Sbjct: 419 RKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG 478
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
AL F M + P+ T++ L+AC + LKLGK+IH Y++R + + VG
Sbjct: 479 DGKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
+ALIS Y+ +E+A + F L RD
Sbjct: 538 SALISMYSGCDSLEVACSV---------------------------------FSELSTRD 564
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV W +++ Q+G + +A++L R M + N T+ + L S LA+L GK+IH
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ 624
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+R G + + N+LI MY + G+I +RR+F+L+ R + VSW MI HG G
Sbjct: 625 FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGMHGFGM 683
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
+A+ LF+ +G+KP+HIT+ +L+AC+H GL+E+G +Y+ MMK + + P +A M
Sbjct: 684 DAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 743
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAG E FIE MP EP+ WGSLL ACR+H N DL + AA L +EP +S
Sbjct: 744 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSS 803
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y + N+YS+ G+WEDAA IR MK GV K G SW++++ K+H F V D HP +
Sbjct: 804 GNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLME 863
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I K K+ DV+ED KE L HSEK+A+AFGLIST T L
Sbjct: 864 QISGKDGKL------------------DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPL 905
Query: 737 RIMKNLRV 744
RI+KNLRV
Sbjct: 906 RIIKNLRV 913
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/640 (28%), Positives = 305/640 (47%), Gaps = 85/640 (13%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
M+ NP I E YA +LQ K N +G VHA+++ G+ + FL + L+ Y +
Sbjct: 80 MDLTNPDECI---EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQ 136
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
T + A+++FD+M + + SW I+ Y
Sbjct: 137 TGCVEDARRMFDKMSERNVFSWTAIMEMYCG----------------------------- 167
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+G ++ I++F MV + V P F V +C+ L + GK V+ +++ G G
Sbjct: 168 --LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNS 225
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV----------------------------- 211
V S+L+M+ K G +A+ F+ + K+V
Sbjct: 226 CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLS 285
Query: 212 ------SSWNVVVSLHIHSGRLDLARAQFDQM-----IERDVVTWNSMIAGYSQNGYDFE 260
+WN ++S + SG+ + A F +M + +VV+W ++IAG QNGYDFE
Sbjct: 286 GVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFE 345
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNAL 319
AL +F M+ + +KP+ T+AS +SAC NL L+ G++IH Y I+ E D+ VGN+L
Sbjct: 346 ALSVFRKMVLE-GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DR 375
+ YAK VE+A++ + I +++++ +L GY G A + ++ +
Sbjct: 405 VDYYAKCRSVEVARR--KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D++ W ++ G+ Q G K A+E F+ M G PN T+S L+ + +L GK+IH
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIH 522
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
LR+ S V +ALI+MYS ++ A VF+ + R + V W S+I A AQ G
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWNSIISACAQSGRS 581
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
A+ L M ++ + +T V L AC+ + QG+ + + + S
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNS 640
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++D+ GR G +Q++ + MP + D+V+W ++S +H
Sbjct: 641 LIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVMISVYGMH 679
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 6/272 (2%)
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+NG+ +A L SM P +++L L +L G Q+HA + +G
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ + L+ +Y + G + ARR+F+ + R SWT+++ G EE I+LF M+
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERN-VFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
G++PDH + V AC+ G+ Y+ M ++ + S++D+ + G +
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSI-GFEGNSCVKGSILDMFIKCGRMDI 243
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEKLLLIEPDNSGAYSALCNLY 626
A F E + + DV W ++S L I+ KL ++PD ++A+ + Y
Sbjct: 244 ARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV-TWNAIISGY 301
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+ G++E+A+ M + K SW +
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTAL 333
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/658 (36%), Positives = 381/658 (57%), Gaps = 50/658 (7%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA--KVGDEM 197
Q LP + S+ +C+A ++ +++H+F +KT + V++ LL +Y+ K+ D
Sbjct: 12 QYLPHNLHL-SLFQTCSAPQEV---EQLHAFSLKTAIFNHPFVSSRLLALYSDPKIND-- 65
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
L AR+ FD++ R ++ WN++I Y +N +
Sbjct: 66 -----------------------------LGYARSIFDRIQRRSLIHWNTIIKCYVENQF 96
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+ + +F ++ + PD FTL + CA L ++ GKQIH ++ F + V
Sbjct: 97 SHDGIVLFHELVHE--YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQG 154
Query: 318 ALISCYAKVGGVEIAQKIVEQ---------SGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+L++ Y+K G ++ A+K+ + + + N++++ +++GY+K GD A +
Sbjct: 155 SLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALEL 214
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + D+V W M+ GYE NG DAV++F M++ G +P++ TL ++LS S LA L
Sbjct: 215 FYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVL 274
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+ IH+ ++G + +LI MY+K G I +A VF I +++ WT++IV
Sbjct: 275 GKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ-KKKVGHWTAIIVG 333
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
L HG+ A+ LF M + G+KP+ I ++GVL AC H GLV+ G++Y++MM N +KI+P
Sbjct: 334 LGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEP 393
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
T H+ +VD+L RAG L+EA N IENMP+ P+ V W SLL R H +D+G+ AA+++
Sbjct: 394 TLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRV 453
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+ + P+ G Y L N+Y++ G WE +++R+ M G +K G S V+ + +H F V
Sbjct: 454 IEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVG 513
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE-EDVKEQMLRHHSEKLAIAFGL 727
D HPQ IY KM+++ +++K +G VPDT VL +E E KE L +HSE+LAIAFGL
Sbjct: 514 DISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGL 573
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I+ +RIMKNLRVCNDCHS K + K+ REI+VRD RFHHFK G CSC DYW
Sbjct: 574 INVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 226/489 (46%), Gaps = 62/489 (12%)
Query: 44 LHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA--KQGRLDLACEV 101
LHLS+F S + + S +F+ V + +L+ Y+ K L A +
Sbjct: 18 LHLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSS-----RLLALYSDPKINDLGYARSI 72
Query: 102 FNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL 161
F+ + R + W TII Y E + I +F E+V + LP FT+ V+ C LG +
Sbjct: 73 FDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVV 131
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK-----------N 210
GK++H +K G V V SL+NMY+K G+ A+ VFDGM K N
Sbjct: 132 QEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGN 191
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ SWN +++ ++ SG D A F QM D+VTWN MIAGY NG +A+ MF MLK
Sbjct: 192 LVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK 251
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S +P TL S LSA + L L G+ IH+Y+ + F+ G +G +LI YAK G +E
Sbjct: 252 LGS-RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIE 310
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A +F +++ + V WTA++VG +
Sbjct: 311 ---------------------------------SALTVFRAIQKKKVGHWTAIIVGLGIH 337
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSV 449
G+ A+ LF M + G KPN +L+ + +D G+Q + + +L
Sbjct: 338 GMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH 397
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERML 506
L+ + +AG++ A+ + V W S++ HG +GE A Q R++
Sbjct: 398 YGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQ---RVI 454
Query: 507 ELGIKPDHI 515
E + P+ I
Sbjct: 455 E--VAPETI 461
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 157/358 (43%), Gaps = 58/358 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK-----------TLC 80
GK +H +K G VF++ SL+N Y+K I A+KVFD M K L
Sbjct: 134 GKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLV 193
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
SWN +++ Y K G D A E+F MP D V+W +I Y G+F +A++MF M++
Sbjct: 194 SWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 253
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
P+ T+ SVL++ + L L G+ +HS++ K G + SL+ MYAK G A
Sbjct: 254 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESAL 313
Query: 201 AVFDGMRLKNVSSWN-VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
VF ++ K V W ++V L IH G
Sbjct: 314 TVFRAIQKKKVGHWTAIIVGLGIH--------------------------------GMAN 341
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ-----IHAYIIRTEFDATGP 314
AL +F M K + LKP+ L+AC + + G+Q ++ Y I + G
Sbjct: 342 HALALFLEMCK-TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYG- 399
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL----DGYIKIGDIGPARRI 368
L+ + G +E A+ +E IS VI + L G I IG+ R I
Sbjct: 400 ---CLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVI 454
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/760 (35%), Positives = 399/760 (52%), Gaps = 109/760 (14%)
Query: 33 KLVHARIIKCGLH-----LSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
KL H R+++ LH LS+ L+ S +NF + + Y VF + P + NT L
Sbjct: 21 KLAHCRLLRLNLHHDNDLLSIILR-STINF---SNNAQYPILVFHKTPTNS----NTFLY 72
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+G M ++D RF NA+ ++ M + ++P FT
Sbjct: 73 NTMIRG-----------MVSKD---------------RFNNAVHLYASMHKAAIVPDSFT 106
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ VL +C L G +HS V KTG V V +++ Y+K G
Sbjct: 107 FSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCG------------F 154
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
L++ +W V FD M+ ++VV+W MI G + G EA+ +F
Sbjct: 155 LRD--AWKV-----------------FDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRG 195
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+L +S L+PD F + L ACA L L+ G+ I
Sbjct: 196 LL-ESGLRPDGFVIVRVLRACARLGDLESGRWI--------------------------- 227
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ + + G+S NV T+L+D Y K G + AR +FD + ++D+V W+AM+ GY
Sbjct: 228 -----DRCMRECGLSR-NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGY 281
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA--S 445
NGL ++A+ELF M + +P+ Y + LS +SL +L+ G A L + E S
Sbjct: 282 ASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNW--AKGLMNYEEFLS 339
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ + +LI Y+K G++ A V+ ++ ++ V + ++I LA +G A +F +M
Sbjct: 340 NPVLGTSLIDFYAKCGSMEEALGVYKMMK-EKDRVVFNAVISGLAMYGQVGAAFGVFGQM 398
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
+ GI P+ T+VG+L CTH GLV+ G+ Y+N M + + PT H+ MVDLL RAG
Sbjct: 399 GKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGF 458
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
L EA+N I+ MP++ +V+ WGSLL CR+H+ L + ++L+ +EP NSG Y L N+
Sbjct: 459 LDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNI 518
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
YS+ +W++A IR ++ G++K G+SWV++ VH F V D HP IY K+ +
Sbjct: 519 YSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESL 578
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
+ ++KE G+ P T VL DVEE+ KE L HSEKLA+AF LIST +R++KNLRVC
Sbjct: 579 FKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVC 638
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH AIK I K+ REIV+RD RFH F G CSCRDYW
Sbjct: 639 GDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 206/479 (43%), Gaps = 97/479 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G ++H+ + K G VF+K +++ FY+K + A KVFD+M VK + SW
Sbjct: 122 LGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSW-------- 173
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
T +I E G+F+ A+ +F +++ + P F +
Sbjct: 174 -----------------------TGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVR 210
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL +C LGDL +G+ + + + GLS V V SL++MY K G A+ VFDG
Sbjct: 211 VLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDG----- 265
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
M+E+D+V W++MI GY+ NG EA+ +F M K
Sbjct: 266 --------------------------MVEKDIVCWSAMIQGYASNGLPREAIELFFEMRK 299
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+++PD + + LS+CA+L L+LG + EF + +G +LI YAK G +E
Sbjct: 300 -VNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSME 358
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A ++ ++++D V + A++ G
Sbjct: 359 ---------------------------------EALGVYKMMKEKDRVVFNAVISGLAMY 385
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSV 449
G A +F M + G PN +T +L + +D G+ S + ++
Sbjct: 386 GQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEH 445
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ + ++AG ++ A + + + + W S++ H + A + ++++EL
Sbjct: 446 YGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIEL 504
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/773 (34%), Positives = 407/773 (52%), Gaps = 103/773 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++++ Y + G L+ A +VF+ + ++ V WT +I Y G AI +F ++Q+ +
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
SVL++C++ L+AG+ +H V+ GL V ++L++MY + G A A+
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F G L+ DVV WN+MI SQNG EAL
Sbjct: 186 F---------------------GHLER---------HLDVVLWNAMITANSQNGSPREAL 215
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACAN---------------LEKLKLGKQI------- 300
+F ML+ + PD T S AC++ L++ LG +
Sbjct: 216 EIFYRMLQ-LGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALV 274
Query: 301 HAYI------IRTEFDATGPVGNA-----LISCYAKVG---------------------- 327
+AY EF A P NA +I+ +A++G
Sbjct: 275 NAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTRST 334
Query: 328 ------GVE------IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G E + + I ++ G++ +V T L+ Y + A R+F + +
Sbjct: 335 LFAALEGCEDLHTARLVEAIAQEIGVA-TDVAIVTDLVMAYARCDGQEDAIRVFSAREEG 393
Query: 376 --DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D TAM+ Y Q + +L+ + + G P+ L +SLA+L G+Q
Sbjct: 394 EWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQ 453
Query: 434 IHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IHA A +++ NA+++MY + G++ AR F+ + R E +SW +M+ A AQH
Sbjct: 454 IHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDE-ISWNAMLSASAQH 512
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G E+ LF ML+ G + + ++ +L+AC H GLVE G +++ M H + P H
Sbjct: 513 GRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEH 572
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+ MVDLLGR G L +A+ ++ MP+ PD W +L+ ACR++ + + G+ AAE++L +
Sbjct: 573 YGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELR 632
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
+++ AY ALCN+YS+ G+WEDAA +RK M +G++K G S ++I++KVH F V D H
Sbjct: 633 ANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSH 692
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQ +AIY ++ ++ I+ G+ T VLHDVEE+ KEQ+LR HSEKLAIAFG++STP+
Sbjct: 693 PQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQ 752
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+TLR++KNLRVC DCH+A KFI K+ REIVVRD RFHHFK G CSC DYW
Sbjct: 753 GSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/558 (24%), Positives = 234/558 (41%), Gaps = 111/558 (19%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
+L +SL+ Y + S+ A VF ++ K++ W ++SAY +
Sbjct: 63 YLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSR---------------- 106
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
G AI +F ++Q+ + SVL++C++ L+AG+ +H
Sbjct: 107 ---------------GHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIH 151
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
V+ GL V ++L++MY + G A A+F G L+
Sbjct: 152 RCAVEAGLGLQEIVASALVSMYGRCGSLRDANALF---------------------GHLE 190
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
DVV WN+MI SQNG EAL +F ML+ + PD T S AC
Sbjct: 191 R---------HLDVVLWNAMITANSQNGSPREALEIFYRMLQ-LGIPPDLVTFVSVFKAC 240
Query: 289 ANLEKLKLG--KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
++ L+ K H + T + V AL++ YA+ G ++ A
Sbjct: 241 SSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCA-------------- 286
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
R F ++ +R+ V+WT+M+ + Q G + AVE F +M+ E
Sbjct: 287 -------------------REFFAAMPERNAVSWTSMIAAFAQIG-HLLAVETFHAMLLE 326
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G P TL A L L + + + A A G A+ +++ L+ Y++ A
Sbjct: 327 GVVPTRSTLFAALEGCEDLHT---ARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDA 383
Query: 467 RRVFNLIHWRQETVSW-----TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
RVF+ +E W T+MI AQ +L+ +E GI PD I Y+ L
Sbjct: 384 IRVFSA----REEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITAL 439
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC + +G++ + + ++ + ++V + G+ G L++A + + MP D
Sbjct: 440 DACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPAR-D 498
Query: 582 VVAWGSLLSACRVHKNLD 599
++W ++LSA H ++
Sbjct: 499 EISWNAMLSASAQHGRVE 516
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 79/346 (22%)
Query: 6 PPSLISPLEFYAHLLQS-NLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
PP L++ + + S +L++ K H + + GL V + +L+N YA+ I
Sbjct: 227 PPDLVTFVSVFKACSSSPSLRASQV---KGFHTCLDETGLGSDVVVATALVNAYARCGEI 283
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM------PNR---------- 108
A++ F MP + SW ++++A+A+ G L LA E F+ M P R
Sbjct: 284 DCAREFFAAMPERNAVSWTSMIAAFAQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGC 342
Query: 109 --------------------DSVSWTTIIVTYNEIGRFKNAIRMFV-------------- 134
D T +++ Y ++AIR+F
Sbjct: 343 EDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTA 402
Query: 135 -------------------EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV-VKT 174
++ + P + + L +C +L LS G+++H+ V
Sbjct: 403 MIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADR 462
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL----DLA 230
L V + N++++MY + G A+ FDGM ++ SWN ++S GR+ DL
Sbjct: 463 RLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLF 522
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
RA + + + V + ++++ + G F+ M D + P
Sbjct: 523 RAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVP 568
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/642 (36%), Positives = 368/642 (57%), Gaps = 40/642 (6%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ SVL CT + + K+VH+ + + GL C V LL K+ M
Sbjct: 42 LVSVLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDP-------- 90
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
R F Q+ + W ++I GY+ G E++ ++ N
Sbjct: 91 ---------------------YPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLY-N 128
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY-IIRTEFDATGPVGNALISCYAKV 326
++ + P FT + L AC+ + LG+Q+H I+ F + VGN LI Y K
Sbjct: 129 SMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKC 188
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G + ++ ++ + +VI++T+L+ Y K+G++ A +FD L +D+VAWTAM+ G
Sbjct: 189 GCLGCGHRVFDE--MLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTG 246
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG--EA 444
Y QN ++A+E+F M G K + TL ++S + L + + + A +SG
Sbjct: 247 YAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPT 306
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S++ V +ALI MY+K G++ A +VF + R S++SMIV A HGL A++LF+
Sbjct: 307 SNVVVGSALIDMYAKCGSVEDAYKVFERMEERN-VYSYSSMIVGFAMHGLAGAAMELFDE 365
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
ML+ IKP+ +T++GVLTAC+H G+VEQGQ+ + MM+ H + P+ H+A MVDLLGRAG
Sbjct: 366 MLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAG 425
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L+EA N ++ MP+ P WG+LL ACR+H N D+ +IAA L +EP+ G Y L N
Sbjct: 426 RLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSN 485
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK-VHVFGVEDWLHPQRDAIYNKMA 683
+Y+S G+W+D + +RK M+ G+KK G SWV+ + +H F D HP+ I +
Sbjct: 486 IYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALE 545
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ D +K +G+ P+ +SV +D+ ++ K+++L HSEKLA+AFGL++T T+RI+KNLR
Sbjct: 546 DLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLR 605
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+C DCHS + ++ REIVVRD RFHHF+ G CSC ++W
Sbjct: 606 ICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 204/465 (43%), Gaps = 67/465 (14%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VHA I + GL F+ L+ +TL + + Y +
Sbjct: 56 KQVHAHIFRKGLEQCCFVLAKLL---------------------RTLTKLDVPMDPYPRL 94
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
VF + + WT +I Y G F ++ ++ M + + P FT T++L
Sbjct: 95 --------VFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALL 146
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+C+A D++ G++VH+ + G G + V N+L++MY K G VFD M ++V
Sbjct: 147 KACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDV 206
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW ++ + G ++ A FD + +D+V W +M+ GY+QN EAL +F M +
Sbjct: 207 ISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERM-QA 265
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--VGNALISCYAKVGGV 329
+ +K D+ TL +SACA L K + ++ F T VG+ALI YAK G V
Sbjct: 266 AGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSV 325
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E A K+ E+ + NV ++++++ G+
Sbjct: 326 EDAYKVFER--MEERNVYSYSSMIVGF-------------------------------AM 352
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLS 448
+GL A+ELF M++ KPN T +L+ S ++ G+Q+ A G A S
Sbjct: 353 HGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSED 412
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ + +AG + A + ++ W +++ A HG
Sbjct: 413 HYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHG 457
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHAR-IIKCGLHLSVFLKNSLMNFYAKTESISYA 67
I P+ F + LL++ + + +G+ VH + I+ G +++ N+L++ Y K +
Sbjct: 135 IGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCG 194
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+VFDEM + + SW +++ AYAK G ++ A E+F+ +P +D V+WT ++ Y + R +
Sbjct: 195 HRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPR 254
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT--NS 185
A+ +F M V + T+ V+++C LG V ++G NV ++
Sbjct: 255 EALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSA 314
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYAK G A VF+ M +NV S +
Sbjct: 315 LIDMYAKCGSVEDAYKVFERMEERNVYS-------------------------------Y 343
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+SMI G++ +G A+ +F MLK + +KP++ T L+AC++ ++ G+Q+ A +
Sbjct: 344 SSMIVGFAMHGLAGAAMELFDEMLK-TEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMM 401
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 9/239 (3%)
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINA-ARRVFNLI 473
S ++SV ++ KQ+HA R G E ++ L T+ ++ R VF +
Sbjct: 40 SRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQV 99
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ + WT++I A G E++ L+ M GI P T+ +L AC+ V G
Sbjct: 100 EYPNPFL-WTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLG 158
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
++ + + +++D+ + G L + + M L+ DV++W SL+ A
Sbjct: 159 RQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISWTSLIVAYA 217
Query: 594 VHKNLDLGKIAAEKLLLIEP-DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQ 651
N++ AA +L P + A++A+ Y+ + +A + + M+ GVK +
Sbjct: 218 KVGNME----AASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/595 (41%), Positives = 364/595 (61%), Gaps = 36/595 (6%)
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G E+ A G+ L NV V+S++ GRLD ARA F+++ ++ VTWN+M+ Y
Sbjct: 50 GREIHRYARISGL-LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYK 108
Query: 254 QNGYDFEALGMFANMLKDS-SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+G D EAL +F M + S S +PDKF+ + + AC+NLE L+ G++IH + R
Sbjct: 109 LDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRRE----- 163
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
G E+ + +V+ T LL+ Y K GD+ AR++FDS+
Sbjct: 164 ---------------GKELHK-----------DVVVGTALLNMYSKCGDLEEARKVFDSI 197
Query: 373 R-DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDH 430
R D D V W AM+ Y Q+G K A++L+RSM P T ++ V + L++L
Sbjct: 198 RHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQ 257
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
G+ IHA + ++L VSNAL+ MY K G ++ A VF+ + + E +SW ++I + A
Sbjct: 258 GRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDE-ISWNTIISSYA 316
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG ++A+ L++ M G+KP +T+VG+L+AC+HGGLV G Y+ M++ H+IKP+
Sbjct: 317 YHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSV 376
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
HF ++DLLGR G L EA +++MP++ + V W SLL AC+ H +L G AA++++
Sbjct: 377 PHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVD 436
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
P SG Y L N+Y++ G+W+D IRK M GVKK+ G SW++I + VH F D
Sbjct: 437 RVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDR 496
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HPQ + IY ++ K+ +E+K +G+VPDT+SV HD+EE+ KE +L HSEKLAI +G +
Sbjct: 497 SHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVV 556
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
P + LRI+KNLRVC DCH+A KF+ ++ R+IVVRDA RFH F+ G CSCRDYW
Sbjct: 557 PGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 611
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 184/417 (44%), Gaps = 70/417 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ-- 140
++S Y K GRLD A F + ++SV+W ++ Y GR + A+ +F EM +
Sbjct: 70 TAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRS 129
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG--LSGCVNVTNSLLNMYAKVGDEMM 198
P +F+ + + +C+ L DL G+++H + + G L V V +LLNMY+K GD
Sbjct: 130 ARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEE 189
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ VFD +R + D V WN+MIA Y+Q+G
Sbjct: 190 ARKVFDSIRH------------------------------DADSVCWNAMIAAYAQHGRG 219
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
+AL ++ +M + L P + T + + CA L LK G+ IHA + T FDA V NA
Sbjct: 220 KQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNA 279
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+ Y K G ++ A LD +F S++ +D +
Sbjct: 280 LVHMYGKCGCLDEA--------------------LD-------------VFHSMKLKDEI 306
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W ++ Y +G + A+ L++ M +G KP T +LS S + G +
Sbjct: 307 SWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD-YFYR 365
Query: 439 LRSGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ SV + +I + + G + A V + + V W S++ A HG
Sbjct: 366 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 422
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 116/220 (52%), Gaps = 12/220 (5%)
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS--LDHGKQIHASALRS 441
+ + NG + +A+ FR M + G +P+ T S +L+ + + + +D G++IH A S
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G ++ V A+I+MY K G ++ AR F + W+ +V+W +M+ G EA++L
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKN-SVTWNAMMTNYKLDGRDREALEL 119
Query: 502 FERMLE--LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM----KNVHKIKPTPSHFAS 555
F M E +PD ++ + AC++ +EQG+ + M+ K +HK + +
Sbjct: 120 FREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGT---A 176
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++++ + G L+EA +++ + D V W ++++A H
Sbjct: 177 LLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQH 216
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 34/270 (12%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y K G LD A +VF+ M +D +SW TII +Y G A+ ++ EM V
Sbjct: 278 NALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVK 337
Query: 143 PTQFTVTSVLASCTALGDLSAG-------KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
PT+ T +L++C+ G ++ G + H GC+ +++ + G
Sbjct: 338 PTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCI------IDLLGRGGR 391
Query: 196 EMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ V M ++ N W ++ G L DQ+++R V W S GY
Sbjct: 392 LAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDR--VPWTS--GGYVL 447
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+ A G + ++ K K A + +++G +H ++ D + P
Sbjct: 448 LSNIYAAAGRWKDV-----EKIRKIMAARGVKKSPGKSWIEIGDVVHEFV---SGDRSHP 499
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYL 344
G + VE+ + + E G+ Y+
Sbjct: 500 QGEEIY--------VELGKMVEEMKGLGYV 521
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/791 (33%), Positives = 408/791 (51%), Gaps = 109/791 (13%)
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
SY K + V+ N +LS + + G L A VF M RD SW ++ Y + G
Sbjct: 118 SYVSKTVTRLGVRL---GNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG 174
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
F A+ ++ M+ + P +T VL +C L DL+ G++VH V++ G V+V N
Sbjct: 175 YFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN 234
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L+ MY K GD +F AR FD+M RD ++
Sbjct: 235 ALITMYVKCGD------IFS-------------------------ARLVFDRMPRRDRIS 263
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
WN+MI+GY +N E L +F M+++ + PD T+ S +SAC L +LG+++H Y+
Sbjct: 264 WNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYV 322
Query: 305 IRTEFDATGPVGN-------------------------------ALISCYAKVG------ 327
I+T F A V N A+IS Y K G
Sbjct: 323 IKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAV 382
Query: 328 --------------GVEIAQKIVEQSGISYLN-----------------VIAFTTLLDGY 356
+ IA + +G+ L+ VI +L+D Y
Sbjct: 383 ETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMY 442
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
K I A +F + +++V++WT++++G N + +A+ F+ M+ KPN+ TL
Sbjct: 443 SKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLV 501
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
++LS + + +L GK+IHA ALR+G + NAL+ MY + G + A FN
Sbjct: 502 SVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN--SCE 559
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
++ SW ++ AQ G G A++LF +M+E + PD IT+ +L AC+ G+V G Y
Sbjct: 560 KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEY 619
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
+ M++ I P H+AS+VDLLGRAG L++AY FI+ MP++PD WG+LL+ACR+++
Sbjct: 620 FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQ 679
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
N++LG++AA+ + ++ + G Y LCNLY+ GKW++ A +RK M+ + G SWV
Sbjct: 680 NVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWV 739
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
++ +VH F D HPQ I + +++++ G S D++ K ++
Sbjct: 740 EVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDAS-KAEIFCG 798
Query: 717 HSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK 776
HSE+LAIAFGLI+T T + + KNL +C +CH+ +KFI K+V R I VRD +FHHFK
Sbjct: 799 HSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKD 858
Query: 777 GLCSCRD--YW 785
G+CSC D YW
Sbjct: 859 GVCSCGDEGYW 869
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 186/665 (27%), Positives = 299/665 (44%), Gaps = 136/665 (20%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
E Y LL+ R G VH+ + K L V L N+L++ + + + A VF +
Sbjct: 95 ETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGK 154
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
M + L SWN ++ YAK G D A+ ++
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFD-------------------------------EALNLY 183
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M+ + P +T VL +C L DL+ G++VH V++ G V+V N+L+ MY K
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKC 243
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
GD A+ VFD M ++ SW N+MI+GY
Sbjct: 244 GDIFSARLVFDRMPRRDRISW-------------------------------NAMISGYF 272
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+N E L +F M+++ + PD T+ S +SAC L +LG+++H Y+I+T F A
Sbjct: 273 ENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEV 331
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V N+LI ++ VG + A+ + S + + +++++T
Sbjct: 332 SVNNSLIQMHSSVGCWDEAEMVF--SKMEFKDLVSWT----------------------- 366
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
AM+ GYE+NGL + AVE + M EG P+ T++++LS + L LD G
Sbjct: 367 --------AMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIM 418
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H A R+G S + V+N+LI MYSK I+ A VF+ I + +SWTS+I+ L +
Sbjct: 419 LHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNY 477
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY---------------- 537
EA+ F++M+ L +KP+ +T V VL+AC G + G+ +
Sbjct: 478 RSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN 536
Query: 538 ---NMMKNVHKIKPTPSHF-------ASMVDLL------GRAGLLQEAYNFIENMPLEPD 581
+M +++P + F AS LL G+ GL E ++ + + PD
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPD 596
Query: 582 VVAWGSLLSACR----VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
+ + SLL AC V L+ + + E I P N Y+++ +L G+ EDA
Sbjct: 597 EITFTSLLCACSRSGMVTDGLEYFE-SMEHKFHIAP-NLKHYASVVDLLGRAGRLEDAYE 654
Query: 638 IRKSM 642
K M
Sbjct: 655 FIKKM 659
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 247/531 (46%), Gaps = 79/531 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G + A+ M + QV + T ++L C S G +VHS+V KT V +
Sbjct: 73 GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+LL+M+ + GD + A VF M +++ SWNV+V
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLV------------------------- 167
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
GY++ GY EAL ++ ML ++PD +T L C L L G+++H +
Sbjct: 168 ------GGYAKAGYFDEALNLYHRMLW-VGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+IR F++ V NALI+ Y +K GDI
Sbjct: 221 VIRYGFESDVDVVNALITMY---------------------------------VKCGDIF 247
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR +FD + RD ++W AM+ GY +N + + + LF M P+ T+++++S
Sbjct: 248 SARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE 307
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+L G+++H +++G + +SV+N+LI M+S G + A VF+ + ++ + VSWT
Sbjct: 308 ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK-DLVSWT 366
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI ++GL E+A++ + M G+ PD IT VL+AC GL+++G M+
Sbjct: 367 AMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI----MLHEF 422
Query: 544 HKIKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV-HKNLD 599
S+ S++D+ + + +A +P +V++W S++ R+ +++ +
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFE 481
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYS----SCGKWEDAANIRKSMKYVG 646
+ +L ++P++ S L SCGK A +R + + G
Sbjct: 482 ALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDG 532
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 208/504 (41%), Gaps = 132/504 (26%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH +IK G V + NSL+ ++ A+ VF +M K L SW ++S Y
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G + A E + +M + + V+P + T+ S
Sbjct: 374 KNGLPEKAVETYTIMEH-------------------------------EGVVPDEITIAS 402
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C LG L G +H F +TGL+ V V NSL++MY+K A VF R+ N
Sbjct: 403 VLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFH--RIPN 460
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
++V++W S+I G N FEAL F M+
Sbjct: 461 -----------------------------KNVISWTSIILGLRLNYRSFEALFFFQQMIL 491
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
SLKP+ TL S LSACA + L GK+IHA+ +RT G + NAL
Sbjct: 492 --SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL----------- 538
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
LD Y++ G + PA F+S ++DV +W +L GY Q
Sbjct: 539 ----------------------LDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQ 575
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G AVELF M+ P+ T +++L S RSG V+
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACS----------------RSG-----MVT 614
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ L S + A NL H + S++ L + G E+A + ++M I
Sbjct: 615 DGLEYFESMEHKFHIAP---NLKH-------YASVVDLLGRAGRLEDAYEFIKKM---PI 661
Query: 511 KPDHITYVGVLTACTHGGLVEQGQ 534
PD + +L AC VE G+
Sbjct: 662 DPDPAIWGALLNACRIYQNVELGE 685
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 44/350 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G ++H + GL V + NSL++ Y+K I A +VF +P
Sbjct: 416 GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP---------------- 459
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
N++ +SWT+II+ R A+ F +M+ + P T+ SV
Sbjct: 460 ---------------NKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSV 503
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C +G LS GK++H+ ++TGL + N+LL+MY + G A F+ K+V
Sbjct: 504 LSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDV 562
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
+SWN++++ + G+ LA F +MIE DV +T+ S++ S++G + L F +
Sbjct: 563 ASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFES 622
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + P+ AS + +L + + +I + D + AL++
Sbjct: 623 MEHKFHIAPNLKHYASVVDLLGRAGRL---EDAYEFIKKMPIDPDPAIWGALLNACRIYQ 679
Query: 328 GVEI----AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VE+ AQ I E S I L K ++ R+I R
Sbjct: 680 NVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 137/329 (41%), Gaps = 65/329 (19%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T A+L + + G ++H+ ++ + + NAL++M+ + G++ A VF +
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
R + SW ++ A+ G +EA+ L+ RML +GI+PD T+ VL C GGL +
Sbjct: 156 AER-DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTC--GGLPDLA 212
Query: 534 Q-RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP--------------- 577
+ R ++ + + +++ + + G + A + MP
Sbjct: 213 RGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYF 272
Query: 578 -------------------LEPDVVAWGSLLSACRVHKNLDLGK------IAAEKLLLIE 612
++PD++ S++SAC + LG+ I + +
Sbjct: 273 ENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVS 332
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
+NS L ++SS G W++A + M++ + SW + + G E
Sbjct: 333 VNNS-----LIQMHSSVGCWDEAEMVFSKMEFKDL-----VSWTAM-----ISGYE---- 373
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
++ + K + + ++ G VPD ++
Sbjct: 374 --KNGLPEKAVETYTIMEHEGVVPDEITI 400
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/670 (35%), Positives = 390/670 (58%), Gaps = 43/670 (6%)
Query: 117 IVTYNEIGRFKNAI-RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG 175
I+ GR K A+ R F E + + P F+ + +C AL L +++H+F +G
Sbjct: 20 IIRLCSTGRVKEALHRRFREGLWSE--PGLFS--HIFRACQALPLL---RQLHAFAATSG 72
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
+ N LL YA +GD A+ +F+ + +NV SWN+++ ++ +G L+ AR FD
Sbjct: 73 AAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFD 132
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+M R+V TWN+M+AG + +G + E+LG F M ++ ++PD++ L S CA L +
Sbjct: 133 EMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREG-MQPDEYGLGSLFRCCAGLRDVV 191
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
G+Q+HAY++R+ D VG++L Y + G
Sbjct: 192 SGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG---------------------------- 223
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
+++ G+ A R SL ++V+ + G QNG + A+E F M G + N T
Sbjct: 224 FLRDGE--AALRALPSL---NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTF 278
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+ ++ S LA+L G+QIHA A+++G + V +L+ MYS+ G + + RV L +
Sbjct: 279 VSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVC-LEYS 337
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ V ++MI A HG G++A+ LF++M+ G +P+ +T++ +L AC+H GL ++G
Sbjct: 338 GTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMN 397
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ +M + ++P+ H+ +VDLLGR+G L EA + I +MP++PD V W +LLSAC+
Sbjct: 398 CFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQ 457
Query: 596 KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
K D+ + AE+++ ++P +S +Y L N+ ++ +WED + +R++M+ V+K G SW
Sbjct: 458 KKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSW 517
Query: 656 VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR 715
V+++ ++H F D H ++ I + ++ I++ G+ PD + V HD+E++ KE L
Sbjct: 518 VELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLA 577
Query: 716 HHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFK 775
HHSEKLAIAF +S PE +R+MKNLRVC+DCH AIK + K++ REIVVRD +RFHHFK
Sbjct: 578 HHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFK 637
Query: 776 KGLCSCRDYW 785
G CSC DYW
Sbjct: 638 DGKCSCGDYW 647
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 214/472 (45%), Gaps = 69/472 (14%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
F N L+ YA A+ +F+ +P + + SWN ++ Y K G L+ A ++F+ MP R
Sbjct: 78 FTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR 137
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
+ +W ++ G + ++ F M ++ + P ++ + S+ C L D+ +G++VH
Sbjct: 138 NVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVH 197
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
++VV++GL + V +SL +MY + G +A L+ + S N
Sbjct: 198 AYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA-----LRALPSLN------------- 239
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
+V+ N+ I+G +QNG D E F +++ + ++ + T S +++C
Sbjct: 240 -------------IVSCNTTISGRTQNG-DAEGALEFFCLMRGAGVEANAVTFVSAVTSC 285
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI-VEQSGISYLNVI 347
++L L G+QIHA I+T D PV +L+ Y++ G + ++++ +E SG
Sbjct: 286 SDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGT------ 339
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
D+V +AM+ Y +G + AV LF+ M+ G
Sbjct: 340 ----------------------------DLVLCSAMISAYGFHGHGQKAVGLFKQMMAAG 371
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAA 466
+PN T +L S D G ++ G S+ ++ + ++G +N A
Sbjct: 372 AEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEA 431
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ + + + V W +++ A + A ++ ER++EL D +YV
Sbjct: 432 EDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELD-PHDSASYV 482
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/549 (40%), Positives = 338/549 (61%), Gaps = 36/549 (6%)
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
M RD+ +W S+IAGY+QN EAL + KP+ FT AS L A +
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEAL-GLLLGMLRGRFKPNGFTFASLLKAAGASASSGI 59
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
G+QIHA ++ ++ VG+AL LD Y
Sbjct: 60 GEQIHALTVKYDWHDDVYVGSAL---------------------------------LDMY 86
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+ G + A +FD L ++ V+W A++ G+ + G + + +F M R G + ++T S
Sbjct: 87 ARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYS 146
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
++ S + + +L+ GK +HA ++SGE S V N ++ MY+K+G++ AR+VF+ + +
Sbjct: 147 SVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVD-K 205
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
++ V+W SM+ A AQ+GLG EA+ FE M + G+ + IT++ +LTAC+HGGLV++G++Y
Sbjct: 206 KDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQY 265
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
++MMK H ++P H+ ++VDLLGRAGLL +A FI MP++P WG+LL +CR+HK
Sbjct: 266 FDMMKE-HNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHK 324
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
N +G+ AA+ + ++PD++G L N+Y+S G+W+ AA +RK MK GVKK SWV
Sbjct: 325 NAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWV 384
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
+I+N VH+F D HP+ + IY K +I +I++ G+VP+T VL V+E ++ L++
Sbjct: 385 EIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQY 444
Query: 717 HSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK 776
HSEK+A+AF LI+ P T+RIMKN+R+C DCHSA ++I K+ +REIVVRD RFHHF
Sbjct: 445 HSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFEREIVVRDTNRFHHFSS 504
Query: 777 GLCSCRDYW 785
G CSC DYW
Sbjct: 505 GSCSCGDYW 513
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 148/329 (44%), Gaps = 65/329 (19%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
M RD SWT++I Y + A+ + + M++ + P FT S+L + A G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
+++H+ VK V V ++LL+MYA+ G MA AVFD + KN SW
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSW---------- 110
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
N++IAG+++ G L MFA M ++ + FT +S
Sbjct: 111 ---------------------NALIAGFARKGDGETTLLMFAEMQRN-GFEATHFTYSSV 148
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
SA A + L+ GK +HA++I++ + VGN ++ YAK G
Sbjct: 149 FSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSG----------------- 191
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+++D AR++FD + +D+V W +ML + Q GL ++AV F M
Sbjct: 192 ------SMID----------ARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMR 235
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+ G N T ++L+ S + GKQ
Sbjct: 236 KCGVHLNQITFLSILTACSHGGLVKEGKQ 264
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 63/284 (22%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A LL++ S + +G+ +HA +K H V++ ++L++ YA+
Sbjct: 44 FASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARC-------------- 89
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
GR+D+A VF+ + +++ VSW +I + G + + MF E
Sbjct: 90 -----------------GRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAE 132
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++ T FT +SV ++ +G L GK VH+ ++K+G V N++L+MYAK G
Sbjct: 133 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGS 192
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ A+ VFD H + DL VTWNSM+ ++Q
Sbjct: 193 MIDARKVFD------------------HVDKKDL-------------VTWNSMLTAFAQY 221
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
G EA+ F M K + ++ T S L+AC++ +K GKQ
Sbjct: 222 GLGREAVTHFEEMRK-CGVHLNQITFLSILTACSHGGLVKEGKQ 264
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 31/163 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +IK G LS F+ N++++ YAK+ S+ A+KVFD + K L +WN++L+A+A+
Sbjct: 161 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQ 220
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +GR A+ F EM + V Q T S+
Sbjct: 221 YG-----------------------------LGR--EAVTHFEEMRKCGVHLNQITFLSI 249
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
L +C+ G + GK+ + + L ++ +++++ + G
Sbjct: 250 LTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAG 292
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/716 (33%), Positives = 395/716 (55%), Gaps = 70/716 (9%)
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P L + N ++ Y K +A +VF+ MP R+ VSW+ ++ + G K ++ +F
Sbjct: 408 PWLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFS 467
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM + + P +FT ++ L +C L L G ++H F +K G V V NSL++MY+K G
Sbjct: 468 EMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 527
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
R++ A F ++++R +++WN+MIAG+
Sbjct: 528 -------------------------------RINEAEKVFRRIVDRSLISWNAMIAGFVH 556
Query: 255 NGYDFEALGMFANMLKDSSLK--PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
GY +AL F M++++++K PD+FTL S L AC++ + GKQIH +++R+ F
Sbjct: 557 AGYGSKALDTFG-MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 615
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
A + G +L+D Y+K G + AR+ FD +
Sbjct: 616 SS---------ATITG----------------------SLVDLYVKCGYLFSARKAFDQI 644
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+++ +++W+++++GY Q G +A+ LF+ + + +++ LS+++ V + A L GK
Sbjct: 645 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 704
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
Q+ A A++ SV N+++ MY K G ++ A + F + + + +SWT +I +H
Sbjct: 705 QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKH 763
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
GLG++++++F ML I+PD + Y+ VL+AC+H G++++G+ ++ + H IKP H
Sbjct: 764 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 823
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+A +VDLLGRAG L+EA + I+ MP++P+V W +LLS CRVH +++LGK + LL I+
Sbjct: 824 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 883
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
N Y + NLY G W + N R+ G+KK G SWV+I+ +VH F + H
Sbjct: 884 AKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 943
Query: 673 PQRDAIYNKMAKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
P I + + ++ E+G+V LHD++++ KE+ LR HSEKLAI L +
Sbjct: 944 PLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 1003
Query: 732 ENT---TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
N T+R+ KNLRVC DCH IK + K+ VVRDA RFH F+ G CSC DY
Sbjct: 1004 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 214/480 (44%), Gaps = 100/480 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H +K G + V + NSL++ Y+K I+ A+KVF + ++L SWN +++ +
Sbjct: 497 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 556
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G A + F +M + ++++ P +FT+TS+
Sbjct: 557 AGYGSKALDTFGMMQEAN---------------------------IKER--PDEFTLTSL 587
Query: 152 LASCTALGDLSAGKKVHSFVVKTGL--SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
L +C++ G + AGK++H F+V++G +T SL+++Y K G A+ FD
Sbjct: 588 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD----- 642
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
Q+ E+ +++W+S+I GY+Q G EA+G+F L
Sbjct: 643 --------------------------QIKEKTMISWSSLILGYAQEGEFVEAMGLFKR-L 675
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++ + + D F L+S + A+ L+ GKQ+ A ++ V N+++ Y K G V
Sbjct: 676 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 735
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ A+K + + +VI++T ++ GY K
Sbjct: 736 DEAEKCFAEMQLK--DVISWTVVITGYGK------------------------------- 762
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLS 448
+GL K +V +F M+R +P+ A+LS S + G+++ + L + G +
Sbjct: 763 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 822
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
++ + +AG + A+ + + + + W +++ HG LG+E ++ R+
Sbjct: 823 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 882
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/563 (38%), Positives = 350/563 (62%), Gaps = 8/563 (1%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGY-------DFEALGMFANMLKDSSLKPDKFTLA 282
AR F Q+ + +WN++I + + EAL F++ML D ++P+KFT
Sbjct: 68 ARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFP 127
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
L ACA L +++ GKQ+H ++++ + V + L+ Y G ++ A + Q+ +
Sbjct: 128 CVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLE 187
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
NV+ + ++DGY+++GD+ +R +FDS+ ++ VV+W M+ G QNG K+A+E+F
Sbjct: 188 G-NVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHD 246
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M PN TL ++L S L +++ GK +H A ++ + +ALI MYSK G+
Sbjct: 247 MQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGS 306
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
I+ A +VF I ++ ++W+++I LA HG +A+ F RM + G+ P + Y+GVL+
Sbjct: 307 IDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLS 366
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
AC+H GLVE+G+ Y M N+ + P H+ MVDLLGRAG L+EA I NMP++PD
Sbjct: 367 ACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDD 426
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
V +LL AC++H N+++G+ A+ L+ P +SG+Y AL N+++S G WE +R M
Sbjct: 427 VILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKM 486
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
K + ++K G SW+++ +H F VED HP+ + I++ + ++ D ++ +G+ P+T VL
Sbjct: 487 KELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVL 546
Query: 703 HDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDRE 762
+++E K+ L +HSEK+AIAFGLIST T L+I+KNLRVC DCHS+IK + K+ +R+
Sbjct: 547 LNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRK 606
Query: 763 IVVRDATRFHHFKKGLCSCRDYW 785
I+VRD RFHHF+ G CSC DYW
Sbjct: 607 IIVRDRKRFHHFENGSCSCMDYW 629
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 223/508 (43%), Gaps = 97/508 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFY--AKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
K +HA IK G L+ F + I YA+K F ++ SWNTI+ A A
Sbjct: 32 KQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRALA 91
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVT 149
DL F++ N + A+ F M+ D ++ P +FT
Sbjct: 92 DSDDDDL----FHV----------------NSL----EALLYFSHMLTDGLVEPNKFTFP 127
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL +C L + GK++H FVVK GL V ++L+ +Y G A +F RL+
Sbjct: 128 CVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLE 187
Query: 210 -NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
NV WNV++ ++ G L +R FD M + VV+WN MI+G +QNG+ EA+ MF +M
Sbjct: 188 GNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDM 247
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ + P+ TL S L A + L ++LGK +H + + E + +G+ALI Y+K G
Sbjct: 248 -QLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGS 306
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD-RDVVAWTAMLVGY 387
++ A ++F+ +R+ ++ + W+A++ G
Sbjct: 307 ID---------------------------------KAVQVFEGIRNKKNPITWSAIIGGL 333
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+G +DA++ F M + G P++ +LS S ++ G+ I+
Sbjct: 334 AMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYY----------- 382
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ N++ + M+ L + G EEA QL +L
Sbjct: 383 --------------------HMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQL---ILN 419
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ +KPD + +L AC G +E G+R
Sbjct: 420 MPVKPDDVILKALLGACKMHGNIEMGER 447
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 48/313 (15%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFV----------------GKLVHARIIKCGLHLSVFLKNS 53
+ L +++H+L L N F GK +H ++K GL F++++
Sbjct: 104 LEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSN 163
Query: 54 LMNFYAKTESISYAKKVFDEMPVK-TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
L+ Y ++ A +F + ++ + WN ++ Y + G L + E+F+ MPN+ VS
Sbjct: 164 LVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVS 223
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W +I + G FK AI MF +M V P T+ SVL + + LG + GK VH F
Sbjct: 224 WNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAE 283
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
K + + ++L++MY+K G A VF+G+R K
Sbjct: 284 KNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNK----------------------- 320
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
++ +TW+++I G + +G +AL F M + + + P LSAC++
Sbjct: 321 -------KNPITWSAIIGGLAMHGRARDALDHFWRM-QQAGVTPSDVVYIGVLSACSHAG 372
Query: 293 KLKLGKQIHAYII 305
++ G+ I+ +++
Sbjct: 373 LVEEGRSIYYHMV 385
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITM--YSKAGNINAARRVFNLIHWRQETV 480
S + H KQIHA +++G+ + L+ S I AR+ F+ IH
Sbjct: 23 SRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIH-HPNCF 81
Query: 481 SWTSMIVALAQ-------HGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQ 532
SW ++I ALA H EA+ F ML G ++P+ T+ VL AC +E+
Sbjct: 82 SWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEE 141
Query: 533 GQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
G++ + V K+ F +++V + G +++A+ LE +VV W ++
Sbjct: 142 GKQLHGF---VVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMID 198
Query: 591 A 591
Sbjct: 199 G 199
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/754 (34%), Positives = 397/754 (52%), Gaps = 108/754 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GKLVHA ++ + L++ LK +L++ Y K +SI A KV
Sbjct: 235 GKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKV--------------------- 273
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+L L +VF WT II + + +F+ AI F EM V+P FT + +
Sbjct: 274 -SKLTLEYDVF---------LWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGI 323
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C+++ L GK++HS VV GL V+V NSL++MY K + M+ AV
Sbjct: 324 LNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSN-MIEDAV--------- 373
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
RA F + +V++W S+IAG+S++G + E++ +F M +
Sbjct: 374 -------------------RA-FRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAM-QG 412
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++P+ FTL++ L AC ++ L +++H YII+ D VGNAL+
Sbjct: 413 VGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALV----------- 461
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D Y +G + A + ++ RDV+ +T++ Q G
Sbjct: 462 ----------------------DAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTG 499
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++ A+ + M ++ + + ++L++ LS ++ + ++ GKQ+H +++SG S +SVSN
Sbjct: 500 NHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSN 559
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
L+ +Y K G I+ A R F I + VSW +I LA +G A+ FE M G++
Sbjct: 560 GLVDLYGKCGCIHDAHRSFLEIT-EPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVE 618
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD IT + VL AC+HGGLV+ G Y+ M+ H I+P H+ +VDLLGRAG L+EA N
Sbjct: 619 PDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMN 678
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
IE MP +PD + + +LL AC++H N+ LG+ A + L ++P + Y L NLY G+
Sbjct: 679 VIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGR 738
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
E R+ M+ GV+K G SW++ +N VH+F D HPQ I+ K+ + + +
Sbjct: 739 SELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRN 798
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G + + L HHSEKLA+AFGLISTP +RI+KN+R+C DCH
Sbjct: 799 QGIWYQ------------ENRALAHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDF 846
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I + +LVDREI+VRD RFH FKKG CSCR YW
Sbjct: 847 IMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 270/573 (47%), Gaps = 105/573 (18%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
SR+ G +H+ IIK G +FL N+L++ Y K ++ A+++FDE
Sbjct: 28 SRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDE------------ 75
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
MP RD SWT ++ Y +IG + A+ +F M+ P +
Sbjct: 76 -------------------MPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNE 116
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT+++ L SC+AL + + G + + V K+G + ++L++ Y+K G A VF+
Sbjct: 117 FTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEY 176
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M ++ SW ++VS + +G +W+ +AL ++
Sbjct: 177 MNNGDIVSWTMMVSSFVEAG------------------SWS-------------QALQLY 205
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M++ + + P++FT L+A + L L GK +HA+++ + + AL+ Y K
Sbjct: 206 HRMIQ-TGVAPNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCK 263
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
+E A K+ + + + DV WTA++
Sbjct: 264 CQSIEDAVKVSKLT---------------------------------LEYDVFLWTAIIS 290
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
G+ Q+ ++A+ F M G PNN+T S +L+ SS+ +LD GKQIH+ + +G +
Sbjct: 291 GFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEN 350
Query: 446 SLSVSNALITMYSKAGN-INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+SV N+L+ MY K N I A R F I +SWTS+I ++HGL EE+I++F
Sbjct: 351 DVSVGNSLVDMYMKCSNMIEDAVRAFRGIA-SPNVISWTSLIAGFSEHGLEEESIKVFGA 409
Query: 505 MLELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
M +G++P+ T +L AC T L + + + ++KN + ++VD
Sbjct: 410 MQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGN--ALVDAYAGL 467
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
G++ +A++ + +M DV+ + SL A R+++
Sbjct: 468 GMVDDAWH-VTSMMKHRDVITYTSL--ATRINQ 497
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 200/419 (47%), Gaps = 45/419 (10%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD+M RDV +W +++ Y + G EAL +F +ML S P++FTL++ L +C+
Sbjct: 69 ARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLI-SGEYPNEFTLSTALRSCS 127
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L + G + A + ++ FD+ +G+ALI
Sbjct: 128 ALREFNHGTRFQALVTKSGFDSNPVLGSALI----------------------------- 158
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
D Y K G A R+F+ + + D+V+WT M+ + + G A++L+ M++ G
Sbjct: 159 ----DFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVA 214
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
PN +T +L+ SS L L++GK +HA + +L + AL+ MY K +I A +V
Sbjct: 215 PNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKV 273
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
L + WT++I Q EAI F M G+ P++ TY G+L AC+
Sbjct: 274 SKLT-LEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILA 332
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR-AGLLQEAYNFIENMPLEPDVVAWGSL 588
++ G++ ++ + + ++ S S+VD+ + + ++++A + P+V++W SL
Sbjct: 333 LDLGKQIHSRVV-MAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIA-SPNVISWTSL 390
Query: 589 LSACRVH--KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
++ H + + A + + + P++ L + +CG + RK Y+
Sbjct: 391 IAGFSEHGLEEESIKVFGAMQGVGVRPNS----FTLSTILGACGTIKSLTQTRKLHGYI 445
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 37/314 (11%)
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+++L + + N ++ G IH+ II+ F + N L+S Y K GV
Sbjct: 15 EYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGV-------- 66
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
AR++FD + RDV +WT ++ Y + G +++A+
Sbjct: 67 -------------------------AEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEAL 101
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
ELF SM+ G PN +TLS L S+L +HG + A +SG S+ + +ALI Y
Sbjct: 102 ELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFY 161
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
SK G A RVF ++ + VSWT M+ + + G +A+QL+ RM++ G+ P+ T+
Sbjct: 162 SKCGCTQEAYRVFEYMN-NGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTF 220
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
V +L A + GL + ++M + +I+ ++VD+ + +++A + +
Sbjct: 221 VKLLAASSFLGLNYGKLVHAHLM--MWRIELNLVLKTALVDMYCKCQSIEDAVK-VSKLT 277
Query: 578 LEPDVVAWGSLLSA 591
LE DV W +++S
Sbjct: 278 LEYDVFLWTAIISG 291
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
++R+ V + P Y+L + + S+ G IH+ ++ G + +SN L+++Y
Sbjct: 2 IWRTTVSKIPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYG 61
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K + AR++F+ + R + SWT ++ A + G EEA++LF+ ML G P+ T
Sbjct: 62 KCFGVAEARQLFDEMPCR-DVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLS 120
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
L +C+ G R+ ++ P ++++D + G QEAY E M
Sbjct: 121 TALRSCSALREFNHGTRFQALVTK-SGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMN- 178
Query: 579 EPDVVAWGSLLSA 591
D+V+W ++S+
Sbjct: 179 NGDIVSWTMMVSS 191
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/714 (34%), Positives = 392/714 (54%), Gaps = 73/714 (10%)
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+TL + SAYA+ G L A EVF+ RD VSW ++ Y + G A +F M
Sbjct: 258 QTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ + + P++ T+ + C++L G+ +H ++ GL + + N+LL+MY + G
Sbjct: 318 LHEGISPSKVTLVNASTGCSSL---RFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSP 374
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A+ +F + I + V+WN+MIAG SQ G
Sbjct: 375 EEARHLF--------------------------------KRIPCNAVSWNTMIAGSSQKG 402
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKL---GKQIHAYIIRTEFDAT 312
A+ +F M + + P + T + L A A N E+ + G+++H+ I+ + +
Sbjct: 403 QMKRAVELFQRM-QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASE 461
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+G A++ YA G ++ A ++ ++
Sbjct: 462 PAIGTAVVKMYASCGAIDEAAASFQRG-------------------------------AM 490
Query: 373 RDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
DR DVV+W A++ Q+G K A+ FR M G PN T A+L + A+L G
Sbjct: 491 EDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG 550
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ +H SG S+L V+ AL +MY + G++ +AR +F + ++ V + +MI A +Q
Sbjct: 551 EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQ 610
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
+GL EA++LF RM + G +PD ++V VL+AC+HGGL ++G + M+ + I P+
Sbjct: 611 NGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSED 670
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+A VD+LGRAG L +A I M ++P V+ W +LL ACR ++++D G++A + +
Sbjct: 671 HYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVREL 730
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
+P + AY L N+ + GKW++AA +R M+ G++K G SW++I+++VH F D
Sbjct: 731 DPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRS 790
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
HP+ + IY ++ ++ EI+E+G+VPDT VL V+E KE++L HSE+LAIA G++S+
Sbjct: 791 HPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS 850
Query: 732 ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ T+R+MKNLRVC DCH+A KFI K+V++EIVVRD RFHHF G CSC DYW
Sbjct: 851 TD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 196/741 (26%), Positives = 318/741 (42%), Gaps = 165/741 (22%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
+ P+ S + LL++ R G+ +HARI+ GL L N L+ Y K
Sbjct: 18 DLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKC 75
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
ES+ ++VF + V RD SWTTII Y
Sbjct: 76 ESLGDVEEVFSRLEV-------------------------------RDEASWTTIITAYT 104
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
E G+ K AI MF M Q+ V T +VL +C LGDLS G+ +H+++V++GL G
Sbjct: 105 EHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSV 164
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ N LL++Y G V M L F++M ERD
Sbjct: 165 LANLLLHIYGSCG------CVASAMLL-------------------------FEKM-ERD 192
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+WN+ IA +Q+G AL +F M + ++P + TL L+ CA + + + IH
Sbjct: 193 LVSWNAAIAANAQSGDLGIALELFQRM-QLEGVRPARITLVIALTVCATIRQ---AQAIH 248
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+I+R +SG+ V++ T L Y ++G
Sbjct: 249 -FIVR-------------------------------ESGLEQTLVVS-TALASAYARLGH 275
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A+ +FD +RDVV+W AML Y Q+G +A LF M+ EG P+ TL ++
Sbjct: 276 LYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---VNA 332
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S+ +SL G+ IH AL G + + NAL+ MY++ G+ AR +F I VS
Sbjct: 333 STGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC--NAVS 390
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT----HGGLVEQGQRYY 537
W +MI +Q G + A++LF+RM G+ P TY+ +L A + +G++ +
Sbjct: 391 WNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLH 450
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP--DVVAWGSLLSACRVH 595
+ + + P+ ++V + G + EA + +E DVV+W +++S+ H
Sbjct: 451 SRIVSC-GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQH 509
Query: 596 ----------KNLDLGKIAAEKLL-------------LIEPD-------NSGAYS----- 620
+ +DL +A ++ L E + +SG S
Sbjct: 510 GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVA 569
Query: 621 -ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
AL ++Y CG E A I F V ++ V +F + Q + +
Sbjct: 570 TALASMYGRCGSLESAREI--------------FEKVAVERDVVIFNAMIAAYSQ-NGLA 614
Query: 680 NKMAKIWDEIKEMGFVPDTAS 700
+ K++ +++ G PD S
Sbjct: 615 GEALKLFWRMQQEGSRPDEQS 635
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 117/269 (43%), Gaps = 65/269 (24%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
++R G+ +H+RI+ CG YA +I A
Sbjct: 439 EARAMAEGRKLHSRIVSCG--------------YASEPAIGTA----------------- 467
Query: 85 ILSAYAKQGRLDLACEVFN--LMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
++ YA G +D A F M +R D VSW II + ++ G K A+ F M V
Sbjct: 468 VVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGV 527
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P Q T +VL +C L+ G+ VH + +G+ + V +L +MY + G A+
Sbjct: 528 APNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESARE 587
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F+ + +ERDVV +N+MIA YSQNG EA
Sbjct: 588 IFEKV------------------------------AVERDVVIFNAMIAAYSQNGLAGEA 617
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACAN 290
L +F M ++ S +PD+ + S LSAC++
Sbjct: 618 LKLFWRMQQEGS-RPDEQSFVSVLSACSH 645
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/657 (36%), Positives = 369/657 (56%), Gaps = 72/657 (10%)
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+R M + V T + ++ C+A G + GK+VH + G + V N+LLN
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLN 98
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY K +N+ L+ A FD+M ER+VV+W +M
Sbjct: 99 MYVK---------------------FNL----------LEEAEDLFDEMPERNVVSWTTM 127
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+ YS N + +AL M ++ ++P+ FT +S L AC L L+ Q+H II+T
Sbjct: 128 ISAYS-NKLNDKALKCLILMFREG-VRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTG 182
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
++ +V + L+D Y K D+ A +
Sbjct: 183 LES---------------------------------DVFVRSALIDVYSKWSDLDNALGV 209
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
FD + RD+V W +++ G+ QN +A+ LF+ M R G + TL+++L + LA L
Sbjct: 210 FDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALL 269
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ G+Q+H L+ + L ++NALI MY K G++ A F+ + ++ +SW++M+
Sbjct: 270 ELGRQVHVHVLKFDQ--DLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAG 326
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
LAQ+G +A++LFE M E G +P++IT +GVL AC+H GLVE+G Y+ MK + + P
Sbjct: 327 LAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDP 386
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ ++DLLGRAG L EA I M EPD V W +LL ACRVH+N+DL AA+K+
Sbjct: 387 GREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKI 446
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+ +EP+++G Y L N+Y++ +WED A +RK+M G++KT G SW+++ ++HVF +
Sbjct: 447 IELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILG 506
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D HP+ + I ++ + + + +G+VPDT VL D+E + KE LR+HSEKLAI FGL+
Sbjct: 507 DTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLM 566
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ T+RI KNLR+C DCH K + ++ R IV+RD R+HHF+ G+CSC DYW
Sbjct: 567 NLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 215/478 (44%), Gaps = 103/478 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH I G +F+ N+L+N Y K + A+ +FDEMP + + SW T++SAY+
Sbjct: 74 GKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSN 133
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ N+ A++ + M ++ V P FT +SV
Sbjct: 134 K---------------------------LND-----KALKCLILMFREGVRPNMFTYSSV 161
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L +L +++H ++KTGL V V ++L+++Y+K D A VFD
Sbjct: 162 LRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD------- 211
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+M RD+V WNS+I G++QN EAL +F M K
Sbjct: 212 ------------------------EMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRM-KR 246
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ D+ TL S L AC L L+LG+Q+H ++++ FD + NALI Y K G +E
Sbjct: 247 AGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLE- 303
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A F + ++DV++W+ M+ G QNG
Sbjct: 304 --------------------------------DANSAFSRMVEKDVISWSTMVAGLAQNG 331
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVS 450
++ A+ELF SM G +PN T+ +L S ++ G S + G
Sbjct: 332 YSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHY 391
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
LI + +AG ++ A ++ + + ++V+W +++ A H + AI ++++EL
Sbjct: 392 GCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIEL 449
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 273/833 (32%), Positives = 412/833 (49%), Gaps = 144/833 (17%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG VH ++K L VF+ N+L++FY S+S A +
Sbjct: 202 VGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALR--------------------- 240
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ--DQV--LPTQF 146
VF +MP R+ VSW ++I +++ G + + +M++ D++ P
Sbjct: 241 ----------VFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVA 290
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLS----------------GCVNVT------- 183
T+ +VL C ++ GK VH +K L GC+N
Sbjct: 291 TLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLN 350
Query: 184 --------NSLLNMYAKVGD---------EMMAKA----------------VFDGMRLKN 210
N+++ ++ GD +M+A F+ L N
Sbjct: 351 NNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPN 410
Query: 211 VSSW-----------------NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
+ N V+ + G L A F + + V +WN++I GYS
Sbjct: 411 LKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYS 470
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
Q+ +L + M K S L PD FT+ S LSAC+ ++ LKLGK++H IIR +
Sbjct: 471 QSSDPRLSLDAYFQM-KSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLER-- 527
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ + +LL YI G++ A +FD++
Sbjct: 528 -------------------------------DSFVYISLLSLYIHCGELSTAHVLFDAME 556
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D+ +V+W M+ GY QNG + A+ LFR MV G +P ++ ++ S L SL G++
Sbjct: 557 DKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGRE 616
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
H AL+ + ++ ++I MY+K G++ + +VFN + R SW +M++ HG
Sbjct: 617 AHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERS-VASWNAMVMGYGIHG 675
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
+EAI+LFE M G PD +T++GVLTAC H GLV +G Y + MK + + PT H+
Sbjct: 676 RAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHY 735
Query: 554 ASMVDLLGRAGLLQEAYNF-IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
A ++D+L RAG L EA E M EP V W LLS+CR+HKNL++G+ A KL + E
Sbjct: 736 ACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSE 795
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P+ Y L NLY+ GKW++ +R+ MK + ++K G SW+++ KV F +
Sbjct: 796 PEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSL 855
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
+ I + + + EI +MG+ PDT+SV HD+ E+ K + LR HSEKLAI +GLI T E
Sbjct: 856 DGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSE 915
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TTLR+ KNLR+C DCH+A K I K+++REIVVRD RFHHFK G CSC DYW
Sbjct: 916 GTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 165/667 (24%), Positives = 301/667 (45%), Gaps = 128/667 (19%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
LC+ +++ Y+ G D + VF+ + ++ W +I +Y+ + N + MFV+M+
Sbjct: 119 LCT--RVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMIT 176
Query: 139 DQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+ +LP FT V+ +C + ++ G VH VVKT L V V+N+L++ Y G
Sbjct: 177 ESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNG--- 233
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+V D +R+ F M ER++V+WNSMI +S NG
Sbjct: 234 ---SVSDALRV-------------------------FKIMPERNLVSWNSMIRVFSDNGL 265
Query: 258 DFEALGMFANMLK---DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
E + M++ + + PD TLA+ L CA ++ +GK +H ++ D
Sbjct: 266 SEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVV 325
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V NAL+ Y+K G + AQ I + + NV+++ T++ G+ GDI + FD LR
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNK--NVVSWNTMVGGFSAAGDI---HKTFDLLRQ 380
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
ML G L D V + ++ P + S + ++ K++
Sbjct: 381 --------MLAG--GGDLRADEVTILNAV------PVCFEESVLPNL----------KEL 414
Query: 435 HASALRSGEASSLS-VSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQH 492
H +L+ + V+NA + Y+K G+++ A RVF I R +TV SW ++I +Q
Sbjct: 415 HCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSI--RSKTVNSWNALIGGYSQS 472
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKN--------- 542
++ + +M G+ PD T +L+AC+ ++ G+ + + ++N
Sbjct: 473 SDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVY 532
Query: 543 -------VHKIKPTPSH-------------FASMVDLLGRAGLLQEAYNFIENMPL---E 579
+H + + +H + +MV+ + G + A + M L +
Sbjct: 533 ISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQ 592
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIA---AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
P ++ S+ AC + +L LG+ A A K LL DN+ ++ ++Y+ G
Sbjct: 593 PCEISMMSVFGACSLLPSLRLGREAHGYALKCLL--EDNAFIACSVIDMYAKNG------ 644
Query: 637 NIRKSMK-YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
++ +S K + G+K+ SW + V +G+ ++AI K+++E++ G
Sbjct: 645 SVMESFKVFNGLKERSVASWNAM---VMGYGIHG---RAKEAI-----KLFEEMQRTGHC 693
Query: 696 PDTASVL 702
PD + L
Sbjct: 694 PDELTFL 700
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 13/282 (4%)
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
G +I Q + E + +S +V+ T ++ Y G +R +FD+LR +++ W A++ Y
Sbjct: 100 GRKIHQLVSESARLSNDDVLC-TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSY 158
Query: 388 EQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
+N L + +E+F M+ E G P+N+T ++ + ++ + G +H +++
Sbjct: 159 SRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVED 218
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ VSNAL++ Y G+++ A RVF ++ R VSW SMI + +GL EE L +M+
Sbjct: 219 VFVSNALVSFYGTNGSVSDALRVFKIMPERN-LVSWNSMIRVFSDNGLSEECFLLLGQMM 277
Query: 507 ----ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E+ PD T VL C + G+ + + + K + A M D+ +
Sbjct: 278 EKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALM-DMYSK 336
Query: 563 AGLLQEAYNFIENMPLEPDVVAW----GSLLSACRVHKNLDL 600
G + +A I + +VV+W G +A +HK DL
Sbjct: 337 CGCINDA-QVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDL 377
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/622 (37%), Positives = 367/622 (59%), Gaps = 67/622 (10%)
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
G ++H ++VK+GLS V N+L+N Y+K ++ FD
Sbjct: 34 GLQLHGYIVKSGLSLIPLVANNLINFYSK------SQLPFD------------------- 68
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
+R F+ ++ TW+S+I+ ++QN + +L M+ SL+PD L S
Sbjct: 69 ------SRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMA-GSLRPDDHVLPS 121
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+C L + +GK +H ++T +DA VG++L+
Sbjct: 122 ATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLV----------------------- 158
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
D Y K G+I AR++FD + R+VV W+ M+ GY Q G N++A+ LF+
Sbjct: 159 ----------DMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
+ E N+Y+ S ++SV ++ L+ G+QI ++S SS V ++L+++YSK G++
Sbjct: 209 LFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDL 268
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A +VF+ + R + W +M+ A AQH ++ I+LF+RM G+KP+ IT++ VL A
Sbjct: 269 EGAYQVFDEVPMRNLGI-WNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLV++G+ Y+++MK +I+PT H+AS+VD+LGRAG L+EA + NMP++P
Sbjct: 328 CSHAGLVDEGKYYFDLMKE-SRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTES 386
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
WG+LL++C +HKN +L AA+K+ + P +SG + +L N Y++ G++EDAA RK ++
Sbjct: 387 VWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
G KK G SWV+ +NKVH F + H + IY K+A++ +E+++ G+V DT+ VL
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLR 506
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
+V+ D K Q +R+HSE+LAIAFGLI+ P + +R+MKNLRVC DCH+AIKF+ R I
Sbjct: 507 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVI 566
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRD RFH F+ G CSC DYW
Sbjct: 567 IVRDNNRFHRFEDGKCSCNDYW 588
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 220/508 (43%), Gaps = 99/508 (19%)
Query: 5 NPPSLISPLEFY---AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
N + P Y LL S+ +SR+ G +H I+K GL L + N+L+NFY+K+
Sbjct: 4 NSSAFFVPCHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKS 63
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ +++ F++ P K+ +W++I+S +A+ N +P W ++
Sbjct: 64 QLPFDSRRAFEDSPQKSATTWSSIISCFAQ-----------NELP------WMSL----- 101
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
+M+ + P + S SC L GK VH +KTG V
Sbjct: 102 ---------EFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVF 152
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V +SL++MYAK G+ + A+ +FD M L+N
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPLRN------------------------------- 181
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
VVTW+ M+ GY+Q G + EAL +F L + +L + ++ ++ +S CAN L+LG+QI
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFE-NLAVNDYSFSTVISVCANSTLLELGRQIQ 240
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
I++ FD++ VG++L+S Y+K GD
Sbjct: 241 GLCIKSSFDSSSFVGSSLVSLYSKC---------------------------------GD 267
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A ++FD + R++ W AML Q+ + +ELF+ M G KPN T +L+
Sbjct: 268 LEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S +D GK S + +L+ M +AG + A + +
Sbjct: 328 CSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESV 387
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELG 509
W +++ + H E A +++ ELG
Sbjct: 388 WGALLTSCTIHKNTELAAFAADKVFELG 415
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 142/272 (52%), Gaps = 9/272 (3%)
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
V G+++ IV +SG+S + ++A L++ Y K +RR F+ + W++++
Sbjct: 32 VKGLQLHGYIV-KSGLSLIPLVA-NNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIIS 89
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
+ QN L ++E R M+ +P+++ L + L+ D GK +H ++++G +
Sbjct: 90 CFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDA 149
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ V ++L+ MY+K G I AR++F+ + R V+W+ M+ AQ G EEA+ LF+
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPLRN-VVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRA 563
L + + ++ V++ C + L+E G++ + K S F +S+V L +
Sbjct: 209 LFENLAVNDYSFSTVISVCANSTLLELGRQIQGL---CIKSSFDSSSFVGSSLVSLYSKC 265
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
G L+ AY + +P+ ++ W ++L AC H
Sbjct: 266 GDLEGAYQVFDEVPMR-NLGIWNAMLKACAQH 296
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 165/370 (44%), Gaps = 50/370 (13%)
Query: 18 HLLQSNLKSRNPF----VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
H+L S KS +GK VH +K G VF+ +SL++ YAK I YA+K+
Sbjct: 117 HVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM--- 173
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
F+ MP R+ V+W+ ++ Y ++G + A+ +F
Sbjct: 174 ----------------------------FDEMPLRNVVTWSGMMYGYAQMGENEEALWLF 205
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
E + + + ++ ++V++ C L G+++ +K+ V +SL+++Y+K
Sbjct: 206 KEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKC 265
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVV---SLHIHSGR-LDLARAQFDQMIERDVVTWNSMI 249
GD A VFD + ++N+ WN ++ + H H+ + ++L + ++ + +T+ +++
Sbjct: 266 GDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVL 325
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
S G E F +++K+S ++P AS + KL+ +I +
Sbjct: 326 NACSHAGLVDEGKYYF-DLMKESRIEPTDKHYASLVDMLGRAGKLEEALEI---VTNMPI 381
Query: 310 DATGPVGNALISCYAKVGGVEI----AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
D T V AL++ E+ A K+ E +S I+ + + D A
Sbjct: 382 DPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKA 441
Query: 366 RRIFDSLRDR 375
R++ LRDR
Sbjct: 442 RKL---LRDR 448
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 27/194 (13%)
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P N + +L S+ S+ G Q+H ++SG + V+N LI YSK+ +R
Sbjct: 11 PCHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSR 70
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP-DHI-----TYVGVL 521
R F + T +W+S+I AQ+ L +++ +M+ ++P DH+ G+L
Sbjct: 71 RAFEDSPQKSAT-TWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGIL 129
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA------SMVDLLGRAGLLQEAYNFIEN 575
+ C G K+VH + + A S+VD+ + G + A +
Sbjct: 130 SRCDIG-------------KSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDE 176
Query: 576 MPLEPDVVAWGSLL 589
MPL +VV W ++
Sbjct: 177 MPLR-NVVTWSGMM 189
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/787 (33%), Positives = 406/787 (51%), Gaps = 107/787 (13%)
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
SY K + V+ N +LS + + G L A VF M RD SW ++ Y + G
Sbjct: 118 SYVSKTVTRLGVRL---GNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAG 174
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
F A+ ++ M+ + P +T VL +C L DL+ G++VH V++ G V+V N
Sbjct: 175 YFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVN 234
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+L+ MY K GD +F AR FD+M RD ++
Sbjct: 235 ALITMYVKCGD------IFS-------------------------ARLVFDRMPRRDRIS 263
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
WN+MI+GY +N E L +F M+++ + PD T+ S +SAC L +LG+++H Y+
Sbjct: 264 WNAMISGYFENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYV 322
Query: 305 IRTEFDATGPVGN-------------------------------ALISCYAKVG------ 327
I+T F A V N A+IS Y K G
Sbjct: 323 IKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAV 382
Query: 328 --------------GVEIAQKIVEQSGISYLN-----------------VIAFTTLLDGY 356
+ IA + +G+ L+ VI +L+D Y
Sbjct: 383 ETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMY 442
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
K I A +F + +++V++WT++++G N + +A+ F+ M+ KPN+ TL
Sbjct: 443 SKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTLV 501
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
++LS + + +L GK+IHA ALR+G + NAL+ MY + G + A FN
Sbjct: 502 SVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN--SCE 559
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
++ SW ++ AQ G G A++LF +M+E + PD IT+ +L AC+ G+V G Y
Sbjct: 560 KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEY 619
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
+ M++ I P H+AS+VDLLGRAG L++AY FI+ MP++PD WG+LL+ACR+++
Sbjct: 620 FESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQ 679
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
N++LG++AA+ + ++ + G Y LCNLY+ GKW++ A +RK M+ + G SWV
Sbjct: 680 NVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWV 739
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
++ +VH F D HPQ I + +++++ G S D++ K ++
Sbjct: 740 EVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDAS-KAEIFCG 798
Query: 717 HSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK 776
HSE+LAIAFGLI+T T + + KNL +C +CH+ +KFI K+V R I VRD +FHHFK
Sbjct: 799 HSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKD 858
Query: 777 GLCSCRD 783
G+CSC D
Sbjct: 859 GVCSCGD 865
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 186/665 (27%), Positives = 299/665 (44%), Gaps = 136/665 (20%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
E Y LL+ R G VH+ + K L V L N+L++ + + + A VF +
Sbjct: 95 ETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGK 154
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
M + L SWN ++ YAK G D A+ ++
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFD-------------------------------EALNLY 183
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M+ + P +T VL +C L DL+ G++VH V++ G V+V N+L+ MY K
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKC 243
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
GD A+ VFD M ++ SW N+MI+GY
Sbjct: 244 GDIFSARLVFDRMPRRDRISW-------------------------------NAMISGYF 272
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+N E L +F M+++ + PD T+ S +SAC L +LG+++H Y+I+T F A
Sbjct: 273 ENDVCLEGLRLFF-MMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEV 331
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V N+LI ++ VG + A+ + S + + +++++T
Sbjct: 332 SVNNSLIQMHSSVGCWDEAEMVF--SKMEFKDLVSWT----------------------- 366
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
AM+ GYE+NGL + AVE + M EG P+ T++++LS + L LD G
Sbjct: 367 --------AMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIM 418
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+H A R+G S + V+N+LI MYSK I+ A VF+ I + +SWTS+I+ L +
Sbjct: 419 LHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNY 477
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY---------------- 537
EA+ F++M+ L +KP+ +T V VL+AC G + G+ +
Sbjct: 478 RSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPN 536
Query: 538 ---NMMKNVHKIKPTPSHF-------ASMVDLL------GRAGLLQEAYNFIENMPLEPD 581
+M +++P + F AS LL G+ GL E ++ + + PD
Sbjct: 537 ALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPD 596
Query: 582 VVAWGSLLSACR----VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
+ + SLL AC V L+ + + E I P N Y+++ +L G+ EDA
Sbjct: 597 EITFTSLLCACSRSGMVTDGLEYFE-SMEHKFHIAP-NLKHYASVVDLLGRAGRLEDAYE 654
Query: 638 IRKSM 642
K M
Sbjct: 655 FIKKM 659
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 247/531 (46%), Gaps = 79/531 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G + A+ M + QV + T ++L C S G +VHS+V KT V +
Sbjct: 73 GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+LL+M+ + GD + A VF M +++ SWNV+V
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLV------------------------- 167
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
GY++ GY EAL ++ ML ++PD +T L C L L G+++H +
Sbjct: 168 ------GGYAKAGYFDEALNLYHRMLW-VGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+IR F++ V NALI+ Y +K GDI
Sbjct: 221 VIRYGFESDVDVVNALITMY---------------------------------VKCGDIF 247
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR +FD + RD ++W AM+ GY +N + + + LF M P+ T+++++S
Sbjct: 248 SARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE 307
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+L G+++H +++G + +SV+N+LI M+S G + A VF+ + ++ + VSWT
Sbjct: 308 ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK-DLVSWT 366
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI ++GL E+A++ + M G+ PD IT VL+AC GL+++G M+
Sbjct: 367 AMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI----MLHEF 422
Query: 544 HKIKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV-HKNLD 599
S+ S++D+ + + +A +P +V++W S++ R+ +++ +
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFE 481
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYS----SCGKWEDAANIRKSMKYVG 646
+ +L ++P++ S L SCGK A +R + + G
Sbjct: 482 ALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDG 532
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 206/504 (40%), Gaps = 132/504 (26%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH +IK G V + NSL+ ++ A+ VF +M K L SW ++S Y
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G + A E + +M + + V+P + T+ S
Sbjct: 374 KNGLPEKAVETYTIMEH-------------------------------EGVVPDEITIAS 402
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C LG L G +H F +TGL+ V V NSL++MY+K A VF + KN
Sbjct: 403 VLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKN 462
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V++W S+I G N FEAL F M+
Sbjct: 463 -------------------------------VISWTSIILGLRLNYRSFEALFFFQQMIL 491
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
SLKP+ TL S LSACA + L GK+IHA+ +RT G + NAL
Sbjct: 492 --SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNAL----------- 538
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
LD Y++ G + PA F+S ++DV +W +L GY Q
Sbjct: 539 ----------------------LDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQ 575
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G AVELF M+ P+ T +++L S RSG V+
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACS----------------RSG-----MVT 614
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
+ L S + A NL H + S++ L + G E+A + ++M I
Sbjct: 615 DGLEYFESMEHKFHIAP---NLKH-------YASVVDLLGRAGRLEDAYEFIKKM---PI 661
Query: 511 KPDHITYVGVLTACTHGGLVEQGQ 534
PD + +L AC VE G+
Sbjct: 662 DPDPAIWGALLNACRIYQNVELGE 685
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 44/350 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G ++H + GL V + NSL++ Y+K I A +VF +P
Sbjct: 416 GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP---------------- 459
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
N++ +SWT+II+ R A+ F +M+ + P T+ SV
Sbjct: 460 ---------------NKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSV 503
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C +G LS GK++H+ ++TGL + N+LL+MY + G A F+ K+V
Sbjct: 504 LSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDV 562
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
+SWN++++ + G+ LA F +MIE DV +T+ S++ S++G + L F +
Sbjct: 563 ASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFES 622
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + P+ AS + +L + + +I + D + AL++
Sbjct: 623 MEHKFHIAPNLKHYASVVDLLGRAGRL---EDAYEFIKKMPIDPDPAIWGALLNACRIYQ 679
Query: 328 GVEI----AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VE+ AQ I E S I L K ++ R+I R
Sbjct: 680 NVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/785 (33%), Positives = 407/785 (51%), Gaps = 107/785 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +L++ L A + R +GK VH +K L + L N+LM+ Y+K
Sbjct: 40 PDVATLVTVLPVCA-------REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 92
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I+ A+ + F + N++ VSW T++ ++
Sbjct: 93 ITNAQMI-------------------------------FKMNNNKNVVSWNTMVGGFSAE 121
Query: 124 GRFKNAIRMFVEMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
G + +M+ + V + T+ + + C L + K++H + +K
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V N+ + YAK G A+ VF G+R K V+S
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNS---------------------------- 213
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
WN++I G++Q+ +L M K S L PD FT+ S LSAC+ L+ L+LGK++H
Sbjct: 214 ---WNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 269
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+IIR +E+ YL+V++ YI G+
Sbjct: 270 GFIIRN---------------------------WLERDLFVYLSVLSL------YIHCGE 296
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ + +FD++ D+ +V+W ++ GY QNG A+ +FR MV G + ++ +
Sbjct: 297 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 356
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S L SL G++ HA AL+ ++ +LI MY+K G+I + +VFN + + T S
Sbjct: 357 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTAS 415
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +MI+ HGL +EAI+LFE M G PD +T++GVLTAC H GL+ +G RY + MK
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI-ENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ +KP H+A ++D+LGRAG L +A + E M E DV W SLLS+CR+H+NL++
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 535
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G+ A KL +EP+ Y L NLY+ GKWED +R+ M + ++K G SW+++
Sbjct: 536 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 595
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KV F V + + I + + + +I +MG+ PDT SV HD+ E+ K + LR HSEK
Sbjct: 596 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 655
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+ +GLI T E TT+R+ KNLR+C DCH+A K I K+++REIVVRD RFHHFK G+CS
Sbjct: 656 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 715
Query: 781 CRDYW 785
C DYW
Sbjct: 716 CGDYW 720
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 215/493 (43%), Gaps = 72/493 (14%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ----VLPTQFTVTSVLASCTALGDLSA 163
R+ VSW ++I +++ G + + + EM+++ +P T+ +VL C ++
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
GK VH + VK L + + N+L++MY+K G A+ +F KNV S
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS---------- 110
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS-LKPDKFTLA 282
WN+M+ G+S G + ML +K D+ T+
Sbjct: 111 ---------------------WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 149
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
+ + C + L K++H Y ++ EF V NA ++ YAK G + AQ
Sbjct: 150 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ--------- 200
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
R+F +R + V +W A++ G+ Q+ + +++
Sbjct: 201 ------------------------RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M G P+++T+ ++LS S L SL GK++H +R+ L V +++++Y G
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ + +F+ + + VSW ++I Q+G + A+ +F +M+ GI+ I+ + V
Sbjct: 297 LCTVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
AC+ + G+ + H ++ S++D+ + G + ++ + E
Sbjct: 356 ACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKST 413
Query: 583 VAWGSLLSACRVH 595
+W +++ +H
Sbjct: 414 ASWNAMIMGYGIH 426
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/644 (35%), Positives = 376/644 (58%), Gaps = 35/644 (5%)
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
L ++ + L+SC L DL+ ++H+ + TG+ V + +L+ A
Sbjct: 32 LLCKYPILRHLSSCKTLKDLT---QIHAQTITTGIFSDNFVASRILSFAA---------- 78
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+S H G + AR F ++ + D+ N++I Y+ + +A
Sbjct: 79 ----------------LSPH---GSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDA 119
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ ++ M + S + PD T L AC+ + L+LG+ IH+++ + + + V N L+
Sbjct: 120 VVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQ 179
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YA G +E A + +++ + ++ ++ GY+K G ARR+F+++ DRDVV+W+
Sbjct: 180 MYASCGLIESAGLVFDRT--PECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWS 237
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
M+ GY Q K+ + LF+ M+ E +PN L LS + L +++ G+ I R
Sbjct: 238 VMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERK 297
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
++ + ALI MYSK G++ A VF+ + + ++W++MI LA +G G++A+ L
Sbjct: 298 NVRLTVRLGTALIDMYSKCGSVERALEVFHKMK-EKNVLAWSAMINGLAINGQGKDALNL 356
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M G+KP+ +T++G+L AC+H LV++G +++ M +++ +KP H MVDL G
Sbjct: 357 FSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYG 416
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG+L +A I++MP +P+ WG+LL+ACR+H + +LG+ ++LL ++P++ G Y
Sbjct: 417 RAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVL 476
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y++CG+W+ A +R+ M+ V KT G S++ + + +H F D HPQ + IY K
Sbjct: 477 LSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAK 536
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ E+K G+ PDT VL D++E+ KE L HHSEKLAIAFGLI T TT+RI KN
Sbjct: 537 LGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKN 596
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCHSA K I K+ +REI+VRD RFHHF+ G CSC D+W
Sbjct: 597 LRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 259/568 (45%), Gaps = 82/568 (14%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYA 59
++ NPP + +P + + +L S +HA+ I G+ F+ + +++F A
Sbjct: 19 LQNQNPPWIPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAA 78
Query: 60 KTE--SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
+ SI YA+ +F + + NT++ AYA PN
Sbjct: 79 LSPHGSIPYARFLFYRIRKPDIFIANTLIRAYA-------------FSPNP--------- 116
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
+A+ + EM + V+ P T +L +C+ + L G+ +HS V K G
Sbjct: 117 ---------IDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGW 167
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
S V+V+N L+ MYA G A VFD + +SWN+++ ++ G AR F+
Sbjct: 168 SSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEA 227
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
M +RDVV+W+ MI GY Q E LG+F +M+ + ++P++ L + LSACA+L ++
Sbjct: 228 MPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGE-KIEPNESVLVNALSACAHLGAMEQ 286
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
G+ I Y+ R T +G ALI Y+K G VE A +
Sbjct: 287 GQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALE---------------------- 324
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+F +++++V+AW+AM+ G NG KDA+ LF M +G KPN T
Sbjct: 325 -----------VFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFI 373
Query: 417 AMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+L+ S +D G H+ G + ++ +Y +AG ++ A+ V + +
Sbjct: 374 GILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPF 433
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH----ITYVGVLTACTHGGLVE 531
+ + W +++ A HG E Q+ +R+LEL P+H + + AC V
Sbjct: 434 KPNSAIWGALLNACRIHGDTELGEQVGKRLLEL--DPNHGGRYVLLSNIYAACGRWDRVA 491
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDL 559
+ +R MM+ ++ TP S +DL
Sbjct: 492 ELRR---MMRE-RQVSKTPG--CSFIDL 513
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/621 (37%), Positives = 363/621 (58%), Gaps = 68/621 (10%)
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMA 199
++P + +L CT LG + G+ VH+ +V + L + + N ++NMYAK G
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG----- 137
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
LD AR FD+M +D+VTW ++IAG+SQN
Sbjct: 138 --------------------------CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPR 171
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+AL +F ML+ L+P+ FTL+S L A + L G Q+HA+ ++ + ++ VG+AL
Sbjct: 172 DALLLFPQMLR-LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSAL 230
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ YA+ G + A+ FD + + V+
Sbjct: 231 VDMYARC---------------------------------GHMDAAQLAFDGMPTKSEVS 257
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + G + A+ L M R+ +P ++T S++ S +S+ +L+ GK +HA +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMI 317
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+SG + N L+ MY+KAG+I+ A+RVF+ + + + VSW +M+ AQHGLG+E +
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHGLGKETL 376
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
FE+ML +GI+P+ I+++ VLTAC+H GL+++G Y+ +MK +K++P H+ + VDL
Sbjct: 377 DRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDL 435
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGR GLL A FI MP+EP WG+LL ACR+HKN++LG AAE+ ++P +SG
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPR 495
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S G+W D A +RK MK GVKK SWV+I+N VH+F D HPQ I
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIR 555
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
K +I +IKE+G+VPDT+ VL V++ +E+ L++HSEKLA+AF L++TP + +RI
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615
Query: 740 KNLRVCNDCHSAIKFICKLVD 760
KN+RVC DCH+AIKF+ K+ +
Sbjct: 616 KNIRVCGDCHAAIKFVSKIYE 636
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 199/371 (53%), Gaps = 51/371 (13%)
Query: 263 GMFA-NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF-DATGPVGNALI 320
G++A ++++ SL PD + L C L K++ G+ +HA+++ + F D + N ++
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ YAK G ++ ARR+FD + +D+V W
Sbjct: 131 NMYAKCGCLD---------------------------------DARRMFDEMPTKDMVTW 157
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TA++ G+ QN +DA+ LF M+R G +PN++TLS++L S S LD G Q+HA L+
Sbjct: 158 TALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK 217
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G SS+ V +AL+ MY++ G+++AA+ F+ + + E VSW ++I A+ G GE A+
Sbjct: 218 YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE-VSWNALISGHARKGEGEHALH 276
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDL 559
L +M +P H TY V +AC G +EQG+ + +M+K+ K+ + +++D+
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN--TLLDM 334
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL-----LLIEPD 614
+AG + +A + + ++PDVV+W ++L+ C H LGK ++ + IEP+
Sbjct: 335 YAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQH---GLGKETLDRFEQMLRIGIEPN 390
Query: 615 NSGAYSALCNL 625
S LC L
Sbjct: 391 E---ISFLCVL 398
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 217/501 (43%), Gaps = 95/501 (18%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
SL+ Y+ LL+ + +GK+ RI+ L S FL N L+
Sbjct: 82 SLVPDYNLYSKLLKECTR-----LGKVEQGRIVHAHLVDSHFLDNHLV------------ 124
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
N I++ YAK G LD A +F+ MP +D V+WT +I +++ R +
Sbjct: 125 -------------LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPR 171
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+A+ +F +M++ + P FT++S+L + + L G ++H+F +K G V V ++L+
Sbjct: 172 DALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALV 231
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+MYA+ G A+ FDGM K+ SW N+
Sbjct: 232 DMYARCGHMDAAQLAFDGMPTKSEVSW-------------------------------NA 260
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+I+G+++ G AL + M + + +P FT +S SACA++ L+ GK +HA++I++
Sbjct: 261 LISGHARKGEGEHALHLLWKMQR-KNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKS 319
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+GN L+ YAK G ++ A +R
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDA---------------------------------KR 346
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+FD L DVV+W ML G Q+GL K+ ++ F M+R G +PN + +L+ S
Sbjct: 347 VFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGL 406
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
LD G + + + + + G ++ A R + W +++
Sbjct: 407 LDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLG 466
Query: 488 ALAQHGLGEEAIQLFERMLEL 508
A H E + ER EL
Sbjct: 467 ACRMHKNMELGVYAAERAFEL 487
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 268/813 (32%), Positives = 433/813 (53%), Gaps = 88/813 (10%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP---VKTLCSWNT 84
N G+ +H++I + L N+L++ Y+K S+ AK+ FD +P + + +WN
Sbjct: 22 NLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNA 81
Query: 85 ILSAYAKQGRLDLACEVFNLM-------PN------------------------------ 107
++SA+ + G A ++F M PN
Sbjct: 82 MISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIV 141
Query: 108 -----RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS 162
R++ T ++ +Y ++G +A +F+ ++ + T ++++++C G
Sbjct: 142 GAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQ 201
Query: 163 AGKKVHSFVVKTGLSGCVNVTNSLLNMYA--KVGDEMMAKAVFDGMRLKNVSSWNVV--- 217
++ + G S+LN + VG A + M + + + NV+
Sbjct: 202 ESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGS-ATAFVLEQAMEVVSATRDNVLGTT 260
Query: 218 -VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++ + S L ARA FD + DVV+WN+M A Y Q+ EAL +F ML + ++P
Sbjct: 261 LLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEG-VRP 319
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
T + L+ACA AY +T A G I Q ++
Sbjct: 320 SVATFITALTACA------------AYPPQT----------------ASAIGKRI-QSLL 350
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD--RDVVAWTAMLVGYEQNGLNK 394
E++G+ +A TL + Y K G + AR +F+ + RD + W +ML Y +GL K
Sbjct: 351 EEAGLEGDTAVANATL-NMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGK 409
Query: 395 DAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+A ELF++M E KPN T A+L S+S S+ G++IHA + +G S + NAL
Sbjct: 410 EAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNAL 469
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
+ MY+K G+++ A+ +F+ QE V +WTS++ AQ+G E A++LF M + G++P
Sbjct: 470 LNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRP 529
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+HIT++ LTAC HGG +EQG + M H I P HF+ +VDLLGR G L EA
Sbjct: 530 NHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKL 589
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
+E + DV+ W +LL AC+ K L+ G+ AE+++ ++P+ + +Y L ++Y++ G+W
Sbjct: 590 LERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRW 648
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
+AA IRK+M G++ G S V++ ++H F D HP+ + IY ++ ++ IK
Sbjct: 649 NEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAA 708
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+V DT VLHDV ++ KE++L HSEKLAIAFGL+STP + LR++KNLRVC+DCH+A
Sbjct: 709 GYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTAT 768
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+ R+I++RD++R+HHF G CSC DYW
Sbjct: 769 KLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 224/485 (46%), Gaps = 75/485 (15%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
+V P + +++ +C+ LG+L+AG+++HS + + N+L++MY+K G + A
Sbjct: 2 EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
K FD RL S +RDVVTWN+MI+ + +NG
Sbjct: 62 KQAFD--RLPRAS--------------------------KRDVVTWNAMISAFLRNGSAR 93
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSAC--ANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F +M D + P+ T S L +C A L L+ + IH I+ + V
Sbjct: 94 EALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRT 153
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
AL+ Y K+G ++ A ++ +++ D P+ +
Sbjct: 154 ALVDSYGKLGSLDDAWEV--------------------FLRKSDEEPSTSL--------- 184
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V +AM+ QNG ++++ LF +M EG KP+ TL ++L+ S L +
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQ 244
Query: 438 ALRSGEASSLSV-SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+ A+ +V L+T Y+++ +++ AR F+ I + VSW +M A QH
Sbjct: 245 AMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQ-SPDVVSWNAMAAAYLQHHRPR 303
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTAC------THGGLVEQGQRYYNMMKNVHKIKPTP 550
EA+ LFERML G++P T++ LTAC T + G+R ++++ T
Sbjct: 304 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI---GKRIQSLLEEAGLEGDTA 360
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENM-PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
A++ ++ + G L +A E + P D + W S+L+A H LGK A E
Sbjct: 361 VANATL-NMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHH---GLGKEAFELFQ 416
Query: 610 LIEPD 614
+E +
Sbjct: 417 AMEAE 421
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 252/746 (33%), Positives = 390/746 (52%), Gaps = 97/746 (13%)
Query: 40 IKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLAC 99
I G +F+ ++++ Y K ++ A+KVFD M + WNT++S K +C
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKN-----SC 187
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
F AI +F +MV+ + TV +VL L
Sbjct: 188 --------------------------FDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQ 221
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
DL+ G + +K G V L +Y+K G+
Sbjct: 222 DLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGE------------------------ 257
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ AR F Q+ + D+V++N+MI+GY+ N ++ +F +L S K +
Sbjct: 258 -------IETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLV-SGEKVNSS 309
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
++ + L L + IH + ++ + V AL + Y+++ +E
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIE--------- 360
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
AR +FD ++ + +W AM+ GY QNGL + A+ L
Sbjct: 361 ------------------------SARLLFDESSEKSLASWNAMISGYAQNGLTEKAISL 396
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F+ M + +PN T++++LS + L +L GK +H R S++ VS ALI MY+K
Sbjct: 397 FQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAK 456
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G+I A+R+F+++ + V+W +MI HG G EA+ LF ML + P +T++
Sbjct: 457 CGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLS 515
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
VL AC+H GLV +G + M + H +P P H+A MVDLLGRAG L +A +FI MP+E
Sbjct: 516 VLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVE 575
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
P WG+LL AC +HK+ +L ++A++KL ++P N G Y L N+YS+ + +AA++R
Sbjct: 576 PGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVR 635
Query: 640 KSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTA 699
+K + KT G + +++ N +H+F D HPQ AIY + K+ +++E GF +T
Sbjct: 636 GVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETG 695
Query: 700 SVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLV 759
+ LHDVEE+ KE M++ HSEKLAIAFGLI++ T +RI+KNLRVC DCH+A KFI K+
Sbjct: 696 TALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKIT 755
Query: 760 DREIVVRDATRFHHFKKGLCSCRDYW 785
+R IVVRDA RFHHFK G+CSC DYW
Sbjct: 756 ERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 192/455 (42%), Gaps = 73/455 (16%)
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
H +D A F + D+ +N +I +S N A+ ++ ++ K + L+PD FT A
Sbjct: 54 HLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYA 113
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
+S ++L L I F + VG+A+++CY
Sbjct: 114 FVISGASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACY------------------- 151
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
K + AR++FD + +RD V W M+ G +N +A+ +F
Sbjct: 152 --------------FKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGD 197
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
MV+ G ++ T++A+L + L L G I A++ G S V L +YSK G
Sbjct: 198 MVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGE 257
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV-- 520
I AR +F I + + VS+ +MI + E +++LF+ +L G K + + VG+
Sbjct: 258 IETARLLFGQI-GQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIP 316
Query: 521 ---------LTACTHGGLVEQG-----------QRYYNMMKNVHKIK--------PTPSH 552
LT C HG + G Y+ + + + + +
Sbjct: 317 VFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLAS 376
Query: 553 FASMVDLLGRAGLLQEAYNFIENM---PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
+ +M+ + GL ++A + + M + P+ V S+LSAC L LGK + L+
Sbjct: 377 WNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD-LI 435
Query: 610 LIEPDNSGAY--SALCNLYSSCGKWEDAANIRKSM 642
E S + +AL ++Y+ CG +A + M
Sbjct: 436 NRESFESNIFVSTALIDMYAKCGSITEAQRLFSMM 470
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 116/268 (43%), Gaps = 63/268 (23%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+ +H K G+ + + +L Y++ I A+ +FDE K+L SWN ++S YA+
Sbjct: 328 RCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQN 387
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G + AI +F EM + +V P TVTS+L
Sbjct: 388 GLTE-------------------------------KAISLFQEMQKCEVRPNPVTVTSIL 416
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
++C LG LS GK VH + + + V+ +L++MYAK G A+ +F M KN
Sbjct: 417 SACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAV 476
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
+W N+MI+GY +GY EAL +F ML S
Sbjct: 477 TW-------------------------------NAMISGYGLHGYGHEALNLFNEMLH-S 504
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQI 300
+ P T S L AC++ ++ G +I
Sbjct: 505 RVSPTGVTFLSVLYACSHAGLVREGDEI 532
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 46/243 (18%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP ++ S L A L +L GK VH I + ++F+ +L++ YAK S
Sbjct: 407 PNPVTVTSILSACAQLGALSL-------GKWVHDLINRESFESNIFVSTALIDMYAKCGS 459
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I+ A+++F MP K +WN ++S Y G Y
Sbjct: 460 ITEAQRLFSMMPEKNAVTWNAMISGYGLHG--------------------------YGH- 492
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNV 182
A+ +F EM+ +V PT T SVL +C+ G + G ++ S V G
Sbjct: 493 ----EALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEH 548
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS----WNVVVSLHIHSGRLDLARAQFDQMI 238
++++ + G+ + KA+ D +R V W ++ + +LAR D++
Sbjct: 549 YACMVDLLGRAGN--LDKAL-DFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLF 605
Query: 239 ERD 241
E D
Sbjct: 606 ELD 608
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/604 (37%), Positives = 352/604 (58%), Gaps = 37/604 (6%)
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER-DV 242
+ +L+ + G ++ A+ + G+ L V + +V L+ G + +AR FD+M + +V
Sbjct: 72 SCVLSRAVRPGRQLHARLLVSGLGLDAVLA-TRLVDLYASCGLVSVARRLFDEMPNQGNV 130
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
WN +I Y+++G A+ ++ ML S++PD FT L ACA L L G+++H
Sbjct: 131 FLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHD 190
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++RT + A +V L+D Y K G +
Sbjct: 191 RVMRTSWAA---------------------------------DVFVCAGLIDMYAKCGCV 217
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +FDS RD V W +M+ QNG +A+ L R+M EG P TL + +S +
Sbjct: 218 DEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAA 277
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ +L G+++H R G S + +L+ MY+K+G + AR +F+ + + +E +SW
Sbjct: 278 ADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQL-FHRELISW 336
Query: 483 TSMIVALAQHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
+MI HG + A +LF RM E + PDHIT+VGVL+AC HGG+V++ + +++M
Sbjct: 337 NAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMV 396
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
V+ IKP H+ +VD+LG +G +EA + I+ M ++PD WG+LL+ C++HKN++L
Sbjct: 397 TVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELA 456
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
++A KL+ +EP+++G Y L N+Y+ GKWE+AA +RK M G+KK SW++++ K
Sbjct: 457 ELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGK 516
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
H F V D HP+ D IY ++ ++ I + G+VPDT SV H+VE+D K M+R HSE+L
Sbjct: 517 SHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERL 576
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AIAFGLISTP T L + KNLRVC DCH IK I ++ REI++RD R+HHF G CSC
Sbjct: 577 AIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSC 636
Query: 782 RDYW 785
+D+W
Sbjct: 637 KDHW 640
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 48/325 (14%)
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
A+ L +C ++ G+Q+HA ++ + + L+ YA G V +
Sbjct: 67 ATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSV---------- 116
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELF 400
ARR+FD + ++ +V W ++ Y ++G + A+EL+
Sbjct: 117 -----------------------ARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELY 153
Query: 401 RSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
R M+ G +P+N+T +L ++L L G+++H +R+ A+ + V LI MY+K
Sbjct: 154 REMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAK 213
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G ++ A VF+ R + V W SMI A Q+G EA+ L M GI P +T V
Sbjct: 214 CGCVDEAWAVFDSTTVR-DAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVS 272
Query: 520 VLTACTHGGLVEQGQRYYNM-----MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
++A G + +G+ + + K+K S++D+ ++G + A +
Sbjct: 273 AISAAADAGALPRGRELHGYGWRRGFGSQDKLK------TSLLDMYAKSGWVTVARVLFD 326
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLD 599
+ ++++W +++ +H + D
Sbjct: 327 QL-FHRELISWNAMICGFGMHGHAD 350
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 147/372 (39%), Gaps = 109/372 (29%)
Query: 7 PSLISPLEF------YAHLLQSNLKSRNPFVGKLVHARIIKCGLHL-------------- 46
P+ +SP + YA +L+S + SR G+ +HAR++ GL L
Sbjct: 51 PAFLSPCPYPYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYAS 110
Query: 47 ------------------SVFLKNSLMNFYAKTESISYAKKVFDEM-------------- 74
+VFL N L+ YA+ A +++ EM
Sbjct: 111 CGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYP 170
Query: 75 PVKTLC-------------------SWNT-------ILSAYAKQGRLDLACEVFNLMPNR 108
PV C SW ++ YAK G +D A VF+ R
Sbjct: 171 PVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVR 230
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
D+V W ++I + GR A+ + M + + PT T+ S +++ G L G+++H
Sbjct: 231 DAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELH 290
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+ + G + SLL+MYAK G +A+ +FD
Sbjct: 291 GYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFD------------------------ 326
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
Q+ R++++WN+MI G+ +G+ A +F M ++ + PD T LSAC
Sbjct: 327 -------QLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSAC 379
Query: 289 ANLEKLKLGKQI 300
+ ++ K++
Sbjct: 380 NHGGMVQEAKEV 391
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 408 PKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P N+ A + S L+ ++ G+Q+HA L SG ++ L+ +Y+ G ++ A
Sbjct: 58 PYPYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVA 117
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACT 525
RR+F+ + + W +I A A+ G E AI+L+ ML G ++PD+ TY VL AC
Sbjct: 118 RRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACA 177
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
+ G+ ++ V + F A ++D+ + G + EA+ ++ + D V
Sbjct: 178 ALLDLGAGREVHD---RVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVR-DAV 233
Query: 584 AWGSLLSAC 592
W S+++AC
Sbjct: 234 VWNSMIAAC 242
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 38/250 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H + G LK SL++ YAK+ ++ A+ +FD++ + L SWN ++ +
Sbjct: 286 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGM 345
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G D ACE+F M N + QV+P T V
Sbjct: 346 HGHADHACELFRRMRN------------------------------EAQVMPDHITFVGV 375
Query: 152 LASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L++C G + K+V +V + V L+++ G A V GM +K
Sbjct: 376 LSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKP 435
Query: 211 VSS-WNVVVS-LHIHSGRLDLARAQFDQMIE---RDVVTWNSMIAGYSQNGYDFEALGMF 265
S W +++ IH ++LA ++IE D + + Y+Q+G +E
Sbjct: 436 DSGIWGALLNGCKIHKN-VELAELALHKLIELEPEDAGNYVLLSNIYAQSG-KWEEAARV 493
Query: 266 ANMLKDSSLK 275
++ + LK
Sbjct: 494 RKLMTNRGLK 503
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/659 (36%), Positives = 374/659 (56%), Gaps = 46/659 (6%)
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV--VKTGLSGCVNVTNSL 186
+ + F + + L +F ++ L LS +V+S V + +S C +V+
Sbjct: 23 SFKKFAHIQKYPFLLCKFFISKRRICNANLFQLSPPFQVYSIVQSLVFAISSCTSVSYCS 82
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++A+V + F G RL VS++ G + A+ FD+M +D+V+WN
Sbjct: 83 -AIHARVIKSLNYSDGFIGDRL---------VSMYFKLGYDEDAQRLFDEMPNKDLVSWN 132
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
S+++G S GY L F M +S +P++ TL S +SACA++ L GK +H +++
Sbjct: 133 SLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVK 192
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
V N+LI+ Y K+G LD A
Sbjct: 193 LGMSGKAKVVNSLINMYGKLG------------------------FLDA---------AS 219
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
++F+ + R +V+W +M+V + NG + ++LF M R G P+ T+ A+L +
Sbjct: 220 QLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 279
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ IHA R G + + ++ AL+ +Y+K G +NA+ +F I R + ++WT+M+
Sbjct: 280 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR-DRIAWTAML 338
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A H G EAI+LF+ M++ G++ DH+T+ +L+AC+H GLVE+G++Y+ +M V+++
Sbjct: 339 AGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRV 398
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+P H++ MVDLLGR+G L++AY I++MP+EP WG+LL ACRV+ N++LGK AE
Sbjct: 399 EPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAE 458
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
+LL ++P + Y L N+YS+ G W DA+ +R MK + + G S+++ NK+H F
Sbjct: 459 QLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFV 518
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D LHP+ D I+ K+ ++ +I+E G P T VLHD++E+VK M+ HSEKLAIAFG
Sbjct: 519 VGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFG 578
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+ T L I KNLR+C DCHS KF L R I++RD+ RFHHF GLCSCRDYW
Sbjct: 579 LLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 229/510 (44%), Gaps = 101/510 (19%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HAR+IK + F+ + L++ Y K A+++FDEMP K L SWN+++S + +G
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L F M E GR P + T+ SV+++
Sbjct: 144 LGACLNAFCRMR--------------TESGR----------------QPNEVTLLSVVSA 173
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C +G L GK +H VVK G+SG V NSL+NMY K+G A +F+ M ++++ SW
Sbjct: 174 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 233
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N +V +H H+ GY++ G D N++K + +
Sbjct: 234 NSMVVIHNHN--------------------------GYAEKGMD------LFNLMKRAGI 261
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
PD+ T+ + L AC + + + IHAYI R F+A + AL++ YAK+G + ++
Sbjct: 262 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 321
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
I E+ ++DRD +AWTAML GY + +
Sbjct: 322 IFEE---------------------------------IKDRDRIAWTAMLAGYAVHACGR 348
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK---QIHASALRSGEASSLSVSN 451
+A++LF MV+EG + ++ T + +LS S ++ GK +I + R L +
Sbjct: 349 EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRV--EPRLDHYS 406
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
++ + ++G + A + + + W +++ A +G E ++ E++L L
Sbjct: 407 CMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD-P 465
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
DH Y+ + + GL + +MK
Sbjct: 466 SDHRNYIMLSNIYSAAGLWRDASKVRALMK 495
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 66/280 (23%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++K G+ + NSL+N Y K + A ++F+EMPV++L SWN+++ +
Sbjct: 183 GKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNH 242
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + ++FNLM + + P Q T+ ++
Sbjct: 243 NGYAEKGMDLFNLMK-------------------------------RAGINPDQATMVAL 271
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT G + +H+++ + G + + + +LLN+YAK+
Sbjct: 272 LRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL------------------ 313
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
GRL+ + F+++ +RD + W +M+AGY+ + EA+ +F M+K+
Sbjct: 314 -------------GRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKE 360
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGK---QIHAYIIRTE 308
++ D T LSAC++ ++ GK +I + + R E
Sbjct: 361 -GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVE 399
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/747 (34%), Positives = 394/747 (52%), Gaps = 94/747 (12%)
Query: 53 SLMNFYAKTESISYAKKV----------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVF 102
+++N + +E++ + +K+ + E V T+ ++S Y K G + A VF
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM-----LVSMYGKCGSIAEAELVF 496
Query: 103 NLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
MP +R V+W ++ Y + R K A +EM+Q VLP + TSVL+SC +
Sbjct: 497 KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE 556
Query: 161 LSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
+ + ++++G S C+ ++S
Sbjct: 557 ---AQVLRMCILESGYRSACLE---------------------------------TALIS 580
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
+H L+ AR+ FD+M DVV+W +M++ ++N DF+ + ++ + PDKF
Sbjct: 581 MHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAEN-RDFKEVHHLFRRMQLEGVIPDKF 639
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
TLA+TL C + L LGK IHA + +A V NAL++ Y+ G
Sbjct: 640 TLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCG------------ 687
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
D A F++++ RD+V+W M Y Q GL K+AV L
Sbjct: 688 ---------------------DWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
FR M EG KP+ T S L+VS A + GK H A SG S +SV+ L+ +Y+K
Sbjct: 727 FRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAK 786
Query: 460 AGNINAARRVF-NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
G ++ A +F W V ++I ALAQHG EEA+++F +M + G++PD T V
Sbjct: 787 CGKLDEAISLFRGACQW--TVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLV 844
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
+++AC H G+VE+G + MK I PT H+A VDLLGRAG L+ A I MP
Sbjct: 845 SIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPF 904
Query: 579 EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
E + + W SLL C++ + +LG+ A+++L ++P NS A+ L N+Y + GKW+DA
Sbjct: 905 EDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVD 964
Query: 639 RKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDT 698
RK + VK G SW++I +VH F D HPQ D IY + K+ ++ G+ D
Sbjct: 965 RKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADK 1024
Query: 699 ASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKL 758
D E+++KE+ L +HSE++AIAFGLI+TP +TTL+I+KNLRVC DCH+A K+I +
Sbjct: 1025 GL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMI 1081
Query: 759 VDREIVVRDATRFHHFKKGLCSCRDYW 785
+ REI+VRD+ RFHHF G CSC+D W
Sbjct: 1082 MGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 254/589 (43%), Gaps = 104/589 (17%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
+ L+ Y LLQS + S + GK H I GL +FL N L+N Y +
Sbjct: 23 ADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRC--------- 73
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
G L+ A +F+ M R+ VSWT +I + G F A
Sbjct: 74 ----------------------GSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAF 111
Query: 131 RMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL----SGCVNVTNS 185
+F M ++ P +T+ ++L +C DL+ G+ +H+ + + GL + V N+
Sbjct: 112 ALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNA 171
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
++NMYAK G A AVF + K DVV+W
Sbjct: 172 MINMYAKCGSPEDAIAVFLTIPEK-------------------------------DVVSW 200
Query: 246 NSMIAGYSQNGYDF-EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+M Y+Q + +AL +F ML L P+ T + L AC +L G +H+ +
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLL-QPLAPNVITFITALGACTSLRD---GTWLHSLL 256
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
GNALI+ Y K G E A +
Sbjct: 257 HEAGLGFDPLAGNALINMYGKCGDWEGAYGVF---------------------------- 288
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSS 423
+ S ++ D+V+W AM+ + G + DA+ +FR + EG +PN+ TL +L ++++
Sbjct: 289 --KAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA 346
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
S ++ H SG + V NA+I+MY+K G +AA VF I W+ + +SW
Sbjct: 347 SGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWN 406
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+M+ A + + F ML GI P+ ++++ +L AC++ ++ G++ ++++
Sbjct: 407 TMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTR 466
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP-DVVAWGSLLSA 591
+ S +V + G+ G + EA + MPL +V W +L A
Sbjct: 467 RRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 207/493 (41%), Gaps = 71/493 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
N I+S YAK G A VF + + D +SW T++ + F + F M+ +
Sbjct: 374 NAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC-VNVTNSLLNMYAKVGDEMMAK 200
P + + ++L +C+ L G+K+HS ++ +V L++MY K G A+
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAE 493
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
VF M L + R +VTWN M+ Y+QN E
Sbjct: 494 LVFKEMPLPS-----------------------------RSLVTWNVMLGAYAQNDRSKE 524
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A G ML+ L PD + S LS+C ++
Sbjct: 525 AFGALMEMLQGGVL-PDALSFTSVLSSCYCSQE--------------------------- 556
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
++ + + +SG Y + T L+ + + ++ AR +FD + DVV+W
Sbjct: 557 --------AQVLRMCILESG--YRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSW 606
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
TAM+ +N K+ LFR M EG P+ +TL+ L +L GK IHA
Sbjct: 607 TAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTE 666
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + ++V NAL+ MYS G+ A F + R + VSW M A AQ GL +EA+
Sbjct: 667 IGLEADIAVENALLNMYSNCGDWREALSFFETMKAR-DLVSWNIMSAAYAQAGLAKEAVL 725
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF M G+KPD +T+ L LV G+ ++ + + S +V L
Sbjct: 726 LFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAE-SGLDSDVSVATGLVKLY 784
Query: 561 GRAGLLQEAYNFI 573
+ G L EA +
Sbjct: 785 AKCGKLDEAISLF 797
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 69/363 (19%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A L + L S +GK++HA + + GL + ++N+L+N Y+ A F+ M
Sbjct: 642 ATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKA 701
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
+ L SWN + +AYA+ G LA K A+ +F M
Sbjct: 702 RDLVSWNIMSAAYAQAG---LA----------------------------KEAVLLFRHM 730
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+ V P + T ++ L +S GK H ++GL V+V L+ +YAK
Sbjct: 731 QLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKC--- 787
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
G+LD A + F + VV N++I +Q+G
Sbjct: 788 ----------------------------GKLDEAISLFRGACQWTVVLLNAIIGALAQHG 819
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
+ EA+ MF M + ++PD TL S +SAC + ++ G +++ E+ P
Sbjct: 820 FSEEAVKMFWKM-QQEGVRPDVATLVSIISACGHAGMVEEG--CSSFLTMKEYFGISPTL 876
Query: 317 N---ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ + G +E A++I+ + N + +T+LL GD R +
Sbjct: 877 EHYACFVDLLGRAGQLEHAEQIIRKMPFED-NTLVWTSLLGTCKLQGDAELGERCAQRIL 935
Query: 374 DRD 376
+ D
Sbjct: 936 ELD 938
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 40/265 (15%)
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+A+L L GK+ H +G L + N LI MY + G++ A +F+ +
Sbjct: 29 TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R VSWT++I A AQ G A LF M LE P+ T V +L AC + + G+
Sbjct: 89 RN-VVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 535 RYYNMMKNVHKIKPTPSHFA---SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS- 590
+ M+ + + + + +M+++ + G ++A +P E DVV+W ++
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP-EKDVVSWTAMAGA 206
Query: 591 ----------ACRVHKNLDLGKIAAEKLLLIEP--------DNSGAYS------------ 620
A R+ + + L +A + I D + +S
Sbjct: 207 YAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPL 266
Query: 621 ---ALCNLYSSCGKWEDAANIRKSM 642
AL N+Y CG WE A + K+M
Sbjct: 267 AGNALINMYGKCGDWEGAYGVFKAM 291
>gi|326524233|dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/677 (34%), Positives = 372/677 (54%), Gaps = 69/677 (10%)
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQVLPTQFTVTSVLASCTALGDLSAG 164
P R + +WT +I GR + + F EM+ + P F + +VL C+ LGD+ +G
Sbjct: 79 PKRSAAAWTAVIAGCARAGRHADGMGAFAEMLAEGGAAPNAFVLAAVLRCCSGLGDVESG 138
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
K++H ++++ G+ + N++L+MYAK GD + K F M + SWN+V+S + S
Sbjct: 139 KRIHGWLLRNGVHLDRVLCNAVLDMYAKSGDYELTKRAFRAMVEVDAVSWNIVISACLQS 198
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + + FD+ RD +WN++I+G +NG +AL +M + + ++ + +T ++
Sbjct: 199 GDILGSTQLFDESPVRDTSSWNTIISGLMRNGCAAKALDRLYHMAR-AGVEFNHYTYSTA 257
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L+ L L LG+Q+H ++ + +A V ++L+ Y K ++ A + E+
Sbjct: 258 LALAGMLSMLDLGRQLHGRVLTSALEADAFVRSSLMDMYCKCSSIKTAVLVFER------ 311
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+ L G +K AW+ M+ GY QNG ++A E FR M+
Sbjct: 312 -----WSHLTGDMKF-------------------AWSTMIAGYVQNGREEEAFEFFRLML 347
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
EG + +TL++ ++ ++ ++ G+ M+ A N
Sbjct: 348 CEGVAADQFTLTSAVAACANAGMVEQGR-----------------------MFDIAPTKN 384
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
A WTSM+ + A HG G AI+LF RM IKP+ +T VGVL+AC
Sbjct: 385 VAL--------------WTSMLCSYASHGKGRMAIKLFNRMTAEKIKPNEVTLVGVLSAC 430
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+HG LV +G+ ++ +M+ + I P+ H+ MVDL GRAGLL +A FI ++ + +
Sbjct: 431 SHGRLVSEGEHFFKLMQEEYGIVPSIEHYNCMVDLYGRAGLLDKANIFINENKIKHESIV 490
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
W +LLSACRVHK+++ K+A+E L+ +E ++G+Y L N+Y++ KW D + +R M
Sbjct: 491 WKTLLSACRVHKDMEHAKLASESLIQLEQCDAGSYVMLSNMYATHSKWRDTSKLRSLMLE 550
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
GV+K G SW+ ++N VH F D HP+ IY + K+ + +KE+G+ V HD
Sbjct: 551 RGVRKQPGRSWIHLKNTVHTFVAGDAAHPRSSEIYTYLEKLMERLKELGYTSRIDLVAHD 610
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
VEE+ +E L+ HSEKLA+AFG+ISTP T LRI KNLR+C DCH AIK++ + DREIV
Sbjct: 611 VEEEQRETALKFHSEKLAMAFGIISTPSGTPLRIFKNLRICVDCHEAIKYVSRATDREIV 670
Query: 765 VRDATRFHHFKKGLCSC 781
VRD RFHHFK CSC
Sbjct: 671 VRDLYRFHHFKDAKCSC 687
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 191/478 (39%), Gaps = 99/478 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H +++ G+HL L N++++ YAK+ K+ F M SWN ++SA +
Sbjct: 138 GKRIHGWLLRNGVHLDRVLCNAVLDMYAKSGDYELTKRAFRAMVEVDAVSWNIVISACLQ 197
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + + ++F+ P RD+ SW TII G A+ M + V +T ++
Sbjct: 198 SGDILGSTQLFDESPVRDTSSWNTIISGLMRNGCAAKALDRLYHMARAGVEFNHYTYSTA 257
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
LA L L G+++H V+ + L V +SL++MY K A VF+
Sbjct: 258 LALAGMLSMLDLGRQLHGRVLTSALEADAFVRSSLMDMYCKCSSIKTAVLVFE------- 310
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
W+ H+ +G + A W++MIAGY QNG + EA F ML +
Sbjct: 311 -RWS-----HL-TGDMKFA--------------WSTMIAGYVQNGREEEAFEFFRLMLCE 349
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ D+FTL S ++ACAN ++ G+ FD P
Sbjct: 350 -GVAADQFTLTSAVAACANAGMVEQGRM---------FD-IAPTK--------------- 383
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
NV +T++L Y G A ++F+ + +
Sbjct: 384 -------------NVALWTSMLCSYASHGKGRMAIKLFNRMTAEKI-------------- 416
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVS 450
KPN TL +LS S + G+ G S+
Sbjct: 417 -----------------KPNEVTLVGVLSACSHGRLVSEGEHFFKLMQEEYGIVPSIEHY 459
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
N ++ +Y +AG ++ A N + E++ W +++ A H E A E +++L
Sbjct: 460 NCMVDLYGRAGLLDKANIFINENKIKHESIVWKTLLSACRVHKDMEHAKLASESLIQL 517
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 38/202 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE---MPVKTLCSWNTILS 87
+G+ +H R++ L F+++SLM+ Y K SI A VF+ + +W+T+++
Sbjct: 269 LGRQLHGRVLTSALEADAFVRSSLMDMYCKCSSIKTAVLVFERWSHLTGDMKFAWSTMIA 328
Query: 88 AYAKQGRLDLACEVFNLM----------------------------------PNRDSVSW 113
Y + GR + A E F LM P ++ W
Sbjct: 329 GYVQNGREEEAFEFFRLMLCEGVAADQFTLTSAVAACANAGMVEQGRMFDIAPTKNVALW 388
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
T+++ +Y G+ + AI++F M +++ P + T+ VL++C+ +S G+ + +
Sbjct: 389 TSMLCSYASHGKGRMAIKLFNRMTAEKIKPNEVTLVGVLSACSHGRLVSEGEHFFKLMQE 448
Query: 174 T-GLSGCVNVTNSLLNMYAKVG 194
G+ + N ++++Y + G
Sbjct: 449 EYGIVPSIEHYNCMVDLYGRAG 470
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 275/822 (33%), Positives = 444/822 (54%), Gaps = 134/822 (16%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLD 96
AR+ K G +++ ++L++ +A+ AK +F++M V+ + S N ++ KQ + +
Sbjct: 779 ARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGE 838
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
A +VF+ M + ++ + +V L + F+ SVL
Sbjct: 839 AAAKVFHEMKDLVGINSDSYVV-----------------------LLSAFSEFSVLEE-- 873
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
G++VH+ V++TGL+ V+ N
Sbjct: 874 ---GRRKGREVHAHVIRTGLND------------------------------NKVAIGNG 900
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+V+++ SG + A + F+ M+E+D V+WNS+I+G QN +A F M + S+ P
Sbjct: 901 LVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM-P 959
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS------CYAK----- 325
FTL STLS+CA+L + LG+QIH ++ D V NAL++ C+ +
Sbjct: 960 SNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVF 1019
Query: 326 --------------VGGVEIAQKIVEQ---------------SGISYLNVIAFTT----- 351
+G + ++ V Q S ++++N+++ +
Sbjct: 1020 SLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLH 1079
Query: 352 ------------------------LLDGYIKIGDIGPARRIFDSLRD-RDVVAWTAMLVG 386
LL Y K G++ +IF + + RD V+W +M+ G
Sbjct: 1080 EVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 1139
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y N L A++L M+++G + +++T + +LS +S+A+L+ G ++HA +R+ S
Sbjct: 1140 YIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESD 1199
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V +AL+ MYSK G I+ A R F L+ R SW SMI A+HG GE+A++LF RM+
Sbjct: 1200 VVVGSALVDMYSKCGRIDYASRFFELMPLRN-VYSWNSMISGYARHGHGEKALKLFTRMM 1258
Query: 507 ELGIKPDHIT-YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G PDH+ +GVL+AC+H G VE+G ++ M V+++ P HF+ MVDLLGRAG
Sbjct: 1259 LDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGK 1318
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSAC-RVH-KNLDLGKIAAEKLLLIEPDNSGAYSALC 623
L E +FI +MP++P+V+ W ++L AC R + +N +LG+ AAE LL +EP N+ Y L
Sbjct: 1319 LDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 1378
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+S KWED A R +MK VKK G SWV +++ VHVF D LHP++D IY+K+
Sbjct: 1379 NMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLR 1438
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
++ ++++ G++P T L D+E + KE++L +HSEK+A+AF +++ +RIMKNLR
Sbjct: 1439 ELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLR 1497
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCHSA +I K+V R+IV+RD+ RFHHF+ G CSC DYW
Sbjct: 1498 VCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 258/605 (42%), Gaps = 122/605 (20%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y + G L A ++F+ M NR+ V+W +I Y + G+ A F +MV+ +
Sbjct: 583 NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFI 642
Query: 143 PTQFTVTSVLASCTALG--DLSAGKKVHSFVVKTGLSGCVNVTN---------------- 184
P + S L +C G G ++H + KT V V N
Sbjct: 643 PNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDA 702
Query: 185 ----------------SLLNMYAKVGDEMMAKAVFDGMR--------------------- 207
S++++Y++ GD + A +F M+
Sbjct: 703 RSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITA 762
Query: 208 ------------------------LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
L+++ + +VS G D A+ F+QM R+VV
Sbjct: 763 ACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVV 822
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT-LASTLSACANLEK-LKLGKQIH 301
+ N ++ G + A +F M + D + L S S + LE+ + G+++H
Sbjct: 823 SMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVH 882
Query: 302 AYIIRTEF-DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
A++IRT D +GN L++ YAK G
Sbjct: 883 AHVIRTGLNDNKVAIGNGLVNMYAKSGA-------------------------------- 910
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
I A +F+ + ++D V+W +++ G +QN ++DA E F M R G P+N+TL + LS
Sbjct: 911 -IADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLS 969
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+SL + G+QIH L+ G + +SVSNAL+ +Y++ G +VF+L+ + V
Sbjct: 970 SCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQV 1028
Query: 481 SWTSMIVALAQHGLG-EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
SW S+I AL+ +A++ F M+ G +T++ +L+A + L E + + +
Sbjct: 1029 SWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHAL 1088
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC----RVH 595
+ + + + +++ G+ G + E M D V+W S++S +H
Sbjct: 1089 VLK-YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLH 1147
Query: 596 KNLDL 600
K +DL
Sbjct: 1148 KAMDL 1152
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 207/443 (46%), Gaps = 85/443 (19%)
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
+++H +K G G + ++N+L+N+Y ++GD A+ +FD M +N+ +W ++S +
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
+G+ D A A+F M+ AG+ N Y F S
Sbjct: 623 NGKPDEACARFRDMVR----------AGFIPNHYAF----------------------GS 650
Query: 284 TLSAC--ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
L AC + KLG QIH I +T + + V N LIS Y
Sbjct: 651 ALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG----------------- 693
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
+ LD AR +FD + R+ ++W +++ Y + G A +LF
Sbjct: 694 ---------SCLDS------ANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFS 738
Query: 402 SMVREGP----KPNNYTLSAMLSVSSSLASLDHG----KQIHASALRSGEASSLSVSNAL 453
SM +EG KPN YT ++++ + S S+D G +Q+ A +SG L V +AL
Sbjct: 739 SMQKEGLGFSFKPNEYTFGSLITAACS--SVDFGLCVLEQMLARVEKSGFLQDLYVGSAL 796
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-GIKP 512
++ +++ G + A+ +F + R VS ++V L + GE A ++F M +L GI
Sbjct: 797 VSGFARFGLTDDAKNIFEQMGVRN-VVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINS 855
Query: 513 DHITYVGVLTACTHGGLVEQGQRY-YNMMKNVHKIKPTPSHFA---SMVDLLGRAGLLQE 568
D +YV +L+A + ++E+G+R + +V + + A +V++ ++G + +
Sbjct: 856 D--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 913
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A + E M +E D V+W SL+S
Sbjct: 914 ACSVFELM-VEKDSVSWNSLISG 935
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 209/487 (42%), Gaps = 108/487 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H +K GL V + N+L+ YA+T + KVF MP SWN+++ A
Sbjct: 979 LGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA-- 1036
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
L + SVS A++ F+EM++ ++ T +
Sbjct: 1037 -------------LSDSEASVS---------------QAVKYFLEMMRGGWGLSRVTFIN 1068
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RLK 209
+L++ ++L ++H+ V+K LS + N+LL+ Y K G+ + +F M +
Sbjct: 1069 ILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETR 1128
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+ SW NSMI+GY N +A+ + M+
Sbjct: 1129 DEVSW-------------------------------NSMISGYIHNELLHKAMDLVWFMM 1157
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + D FT A+ LSACA++ L+ G ++HA IR ++ VG+AL+ Y+K G +
Sbjct: 1158 QKGQ-RLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRI 1216
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ A + E + P R ++ +W +M+ GY +
Sbjct: 1217 DYASRFFE------------------------LMPLRNVY---------SWNSMISGYAR 1243
Query: 390 NGLNKDAVELFRSMVREGPKPNNYT-LSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+G + A++LF M+ +G P++ L +LS S + ++ G + H ++ S
Sbjct: 1244 HGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPR 1302
Query: 449 VS--NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG-----LGEEAIQL 501
V + ++ + +AG ++ N + + + W +++ A + LG A ++
Sbjct: 1303 VEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEM 1362
Query: 502 FERMLEL 508
+LEL
Sbjct: 1363 ---LLEL 1366
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 134/321 (41%), Gaps = 67/321 (20%)
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ +++H +++ G +L +SN LI +Y + G++ +A+++F+ + R V+W +I
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRN-LVTWACLISG 619
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG------------GLVEQGQ-- 534
Q+G +EA F M+ G P+H + L AC GL+ + +
Sbjct: 620 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 679
Query: 535 -----------RYYNMMKNVHKIKPTPSHFA--------SMVDLLGRAGLLQEAYNFIEN 575
Y + + + + + S++ + R G AY+ +
Sbjct: 680 SDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSS 739
Query: 576 MPLE-------PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG------AYSAL 622
M E P+ +GSL++A ++D G E+ +L + SG SAL
Sbjct: 740 MQKEGLGFSFKPNEYTFGSLITA--ACSSVDFGLCVLEQ-MLARVEKSGFLQDLYVGSAL 796
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
+ ++ G +DA NI F + ++N V + G+ L Q+
Sbjct: 797 VSGFARFGLTDDAKNI--------------FEQMGVRNVVSMNGLMVGLVKQKQG--EAA 840
Query: 683 AKIWDEIKEM-GFVPDTASVL 702
AK++ E+K++ G D+ VL
Sbjct: 841 AKVFHEMKDLVGINSDSYVVL 861
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 265/785 (33%), Positives = 407/785 (51%), Gaps = 107/785 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +L++ L A + R +GK VH +K L + L N+LM+ Y+K
Sbjct: 290 PDVATLVTVLPVCA-------REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 342
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I+ A+ + F + N++ VSW T++ ++
Sbjct: 343 ITNAQMI-------------------------------FKMNNNKNVVSWNTMVGGFSAE 371
Query: 124 GRFKNAIRMFVEMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
G + +M+ + V + T+ + + C L + K++H + +K
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 431
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V N+ + YAK G A+ VF G+R K V+S
Sbjct: 432 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNS---------------------------- 463
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
WN++I G++Q+ +L M K S L PD FT+ S LSAC+ L+ L+LGK++H
Sbjct: 464 ---WNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+IIR +E+ YL+V++ YI G+
Sbjct: 520 GFIIRN---------------------------WLERDLFVYLSVLSL------YIHCGE 546
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ + +FD++ D+ +V+W ++ GY QNG A+ +FR MV G + ++ +
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S L SL G++ HA AL+ ++ +LI MY+K G+I + +VFN + + T S
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTAS 665
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +MI+ HGL +EAI+LFE M G PD +T++GVLTAC H GL+ +G RY + MK
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI-ENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ +KP H+A ++D+LGRAG L +A + E M E DV W SLLS+CR+H+NL++
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G+ A KL +EP+ Y L NLY+ GKWED +R+ M + ++K G SW+++
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KV F V + + I + + + +I +MG+ PDT SV HD+ E+ K + LR HSEK
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 905
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+ +GLI T E TT+R+ KNLR+C DCH+A K I K+++REIVVRD RFHHFK G+CS
Sbjct: 906 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 965
Query: 781 CRDYW 785
C DYW
Sbjct: 966 CGDYW 970
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/566 (22%), Positives = 244/566 (43%), Gaps = 95/566 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G VH ++K GL VF+ N+L++FY ++ A ++FD MP + L SWN+++ ++
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G + E F L+ ++ N G F +P T+ +
Sbjct: 265 DNG---FSEESFLLLGE---------MMEENGDGAF---------------MPDVATLVT 297
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL C ++ GK VH + VK L + + N+L++MY+K G A+ +F KN
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V S WN+M+ G+S G + ML
Sbjct: 358 VVS-------------------------------WNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 271 DSS-LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+K D+ T+ + + C + L K++H Y ++ EF V NA ++ YAK G +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
AQ R+F +R + V +W A++ G+ Q
Sbjct: 447 SYAQ---------------------------------RVFHGIRSKTVNSWNALIGGHAQ 473
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+ + +++ M G P+++T+ ++LS S L SL GK++H +R+ L V
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+++++Y G + + +F+ + + VSW ++I Q+G + A+ +F +M+ G
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I+ I+ + V AC+ + G+ + H ++ S++D+ + G + ++
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVH 595
+ E +W +++ +H
Sbjct: 652 SKVFNGLK-EKSTASWNAMIMGYGIH 676
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 203/453 (44%), Gaps = 71/453 (15%)
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
LC+ I++ YA G D + VF+ + +++ W +I +Y+ + + F+EM+
Sbjct: 121 VLCT--RIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 138 QD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+LP FT V+ +C + D+ G VH VVKTGL V V N+L++ Y G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A +FD M +N+ S WNSMI +S NG
Sbjct: 239 TDALQLFDIMPERNLVS-------------------------------WNSMIRVFSDNG 267
Query: 257 YDFEALGMFANMLK---DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+ E+ + M++ D + PD TL + L CA ++ LGK +H + ++ D
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ NAL+ Y+K G + AQ I + + NV+++ T++ G+ GD FD LR
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMVGGFSAEGD---THGTFDVLR 382
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
ML G E K + T+ + V + L K+
Sbjct: 383 Q--------MLAGGED------------------VKADEVTILNAVPVCFHESFLPSLKE 416
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQH 492
+H +L+ + V+NA + Y+K G+++ A+RVF+ I R +TV SW ++I AQ
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQS 474
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
++ +M G+ PD T +L+AC+
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 177/422 (41%), Gaps = 76/422 (18%)
Query: 117 IVTYNEIGRFKNAIRMFVEMV------QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
I + E G + R E V D L + + +L + D+ G+K+H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
V SG + N D+++ + ++++ G D +
Sbjct: 110 V-----SGSTRLRN----------DDVLCTRI---------------ITMYAMCGSPDDS 139
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD + +++ WN++I+ YS+N E L F M+ + L PD FT + ACA
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+ + +G +H +++T VGNAL+S Y G F
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG---------------------FV 238
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK- 409
T A ++FD + +R++V+W +M+ + NG ++++ L M+ E
Sbjct: 239 T------------DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
Query: 410 ---PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P+ TL +L V + + GK +H A++ L ++NAL+ MYSK G I A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG--IKPDHITYVGVLTAC 524
+ +F + + + VSW +M+ + G + +ML G +K D +T + + C
Sbjct: 347 QMIFKMNN-NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 525 TH 526
H
Sbjct: 406 FH 407
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 132/287 (45%), Gaps = 23/287 (8%)
Query: 319 LISCYAKVGGVEIAQKIVEQ-SGISYL--NVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
L+ K +E+ +KI + SG + L + + T ++ Y G +R +FD+LR +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
++ W A++ Y +N L + +E F M+ P+++T ++ + ++ + G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +++G + V NAL++ Y G + A ++F+++ R VSW SMI + +G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN-LVSWNSMIRVFSDNGF 268
Query: 495 GEEAIQLFERMLEL----GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH------ 544
EE+ L M+E PD T V VL C +R + K VH
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR-------EREIGLGKGVHGWAVKL 321
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++ +++D+ + G + A I M +VV+W +++
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 367
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 271/825 (32%), Positives = 421/825 (51%), Gaps = 104/825 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F GKL +++ +K F A+ + Y K++ + L N ++ Y
Sbjct: 93 FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY-KQILEMGFESDLYVGNALVDMY 151
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
++ G L A +VF+ MP RD VSW ++I Y+ G ++ A+ ++ E+ ++P FTV+
Sbjct: 152 SRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVS 211
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL + L + G+ +H F +K+G++ V N LL MY K A+ VF
Sbjct: 212 SVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVF------ 265
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
D+M+ RD VT+N+MI GY + E++ MF L
Sbjct: 266 -------------------------DEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENL 300
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
KPD T+ S L AC +L L L K I+ Y++R F V N LI YAK G +
Sbjct: 301 --DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDM 358
Query: 330 EIAQKIVE------------------QSG---------------------ISYLNVIAFT 350
A+ + QSG I+YL +I+ +
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLS 418
Query: 351 T-----------------------------LLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
T L+D Y K G++G + +IF+S+ D V W
Sbjct: 419 TRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWN 478
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ + G +++ M + P+ T L + +SLA+ GK+IH LR
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S L + NALI MYSK G + ++ RVF + R++ V+WT MI A +G GE+A++
Sbjct: 539 GYESELQIGNALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALES 597
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F M + GI PD + ++ ++ AC+H GLVE+G + MK +KI P H+A +VDLL
Sbjct: 598 FVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLS 657
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R+ + +A FI+ MP+EPD W S+L ACR +++ + + +++ + PD+ G
Sbjct: 658 RSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
N Y++ KW+ + IRKS++ +KK G+SW++I KVHVF D PQ +AI+
Sbjct: 718 ASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKS 777
Query: 682 MAKIWDEIKEMGFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ ++ + + G++PD+ V ++ EE+ K +++ HSE+LAIAFGL++T T L++MK
Sbjct: 778 LEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMK 837
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC+DCH K I K+V REI+VRDA RFH FK G+CSC+D W
Sbjct: 838 NLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 267/562 (47%), Gaps = 103/562 (18%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM-PVKTLCSWNTILSAYAK 91
+ +HA +I GL S F L++ Y+ + + + VF + P K + WN+I+ A
Sbjct: 24 RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRA--- 80
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+++ G F A+ + ++ + +V P ++T SV
Sbjct: 81 ----------------------------FSKNGWFPKALEFYGKLRESKVSPDKYTFPSV 112
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C L D G V+ +++ G + V N+L++MY+++G A+ VFD M ++++
Sbjct: 113 IKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDL 172
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S WNS+I+GYS +GY EAL ++ + L++
Sbjct: 173 VS-------------------------------WNSLISGYSSHGYYEEALEIY-HELRN 200
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S + PD FT++S L A ANL +K G+ +H + +++ ++ V N L++ Y K
Sbjct: 201 SWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTD 260
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+++ FD + RD V + M+ GY +
Sbjct: 261 ARRV---------------------------------FDEMVVRDSVTYNTMICGYLKLE 287
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ +++V++F + + KP+ T++++L L L K I+ LR+G +V N
Sbjct: 288 MVEESVKMFLENLDQF-KPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKN 346
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI +Y+K G++ AR VFN + + +TVSW S+I Q G EA++LF+ M+ + +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
DHITY+ +++ T ++ G+ + N +K+ I + S+ +++D+ + G + ++
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSN--ALIDMYAKCGEVGDSL 463
Query: 571 NFIENMPLEPDVVAWGSLLSAC 592
+M D V W +++SAC
Sbjct: 464 KIFNSMG-TLDTVTWNTVISAC 484
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 207/492 (42%), Gaps = 99/492 (20%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ + K ++ +++ G L +KN L++ YAK + A+ VF+ M K SWN+I+
Sbjct: 321 RDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
S Y + G L A ++F +M M +E D +
Sbjct: 381 SGYIQSGDLMEAMKLFKMM--------------------------MIMEEQADHI----- 409
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +++ T L DL GK +HS +K+G+ ++V+N+L++MYAK G+ + +F+ M
Sbjct: 410 TYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSM 469
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
G LD VTWN++I+ + G DF
Sbjct: 470 ------------------GTLD-------------TVTWNTVISACVRFG-DFATGLQVT 497
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++ + + PD T TL CA+L +LGK+IH ++R +++ +GNALI Y+K
Sbjct: 498 TQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +E + R+F+ + RDVV WT M+
Sbjct: 558 GCLE---------------------------------SSFRVFERMSRRDVVTWTGMIYA 584
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y G + A+E F M + G P++ A++ S ++ G +
Sbjct: 585 YGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDP 644
Query: 447 LSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ A ++ + S++ I+ A + + W S++ A G E A ++ R+
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRI 704
Query: 506 LELGIKPDHITY 517
+EL PD Y
Sbjct: 705 IEL--NPDDPGY 714
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+S LS SS+L L ++IHA + G S S LI YS ++ VF +
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVS 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
+ W S+I A +++G +A++ + ++ E + PD T+ V+ AC E G
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 535 RYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
Y K + ++ + ++VD+ R GLL A + MP+ D+V+W SL+S
Sbjct: 127 LVY---KQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLISGY 182
Query: 593 RVH 595
H
Sbjct: 183 SSH 185
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/751 (34%), Positives = 394/751 (52%), Gaps = 102/751 (13%)
Query: 53 SLMNFYAKTESISYAKKV----------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVF 102
+++N + +E++ + +K+ + E V T+ ++S Y K G + A VF
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM-----LVSMYGKCGSISEAELVF 496
Query: 103 NLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
MP +R V+W ++ Y + R K A +EM+Q VLP + TSVL+SC +
Sbjct: 497 KEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE 556
Query: 161 LSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
+ + ++++G S C+ ++S
Sbjct: 557 ---AQVLRMCILESGYRSACLE---------------------------------TALIS 580
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
+H L+ AR+ F++M DVV+W +M++ ++N DF+ + ++ + PDKF
Sbjct: 581 MHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAEN-RDFKEVHNLFRRMQLEGVIPDKF 639
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
TLA+TL C L LGK IHA + +A V NAL++ Y+ G
Sbjct: 640 TLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCG------------ 687
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
D A F++++ RD+V+W M Y Q GL K+AV L
Sbjct: 688 ---------------------DWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLL 726
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
FR M EG KP+ T S L+VS A + GK HA A SG S +SV+ L+ +Y+K
Sbjct: 727 FRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAK 786
Query: 460 AGNINAARRVFNLIHWRQETVSWT-----SMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
G ++ A +F + WT ++I ALAQHG EEA+++F +M + G++PD
Sbjct: 787 CGKLDEAMSLF------RGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDV 840
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
T V +++AC H G+VE+G + MK I PT H+A VDLLGRAG L+ A I
Sbjct: 841 ATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIR 900
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
MP E + + W SLL C++ + +LG+ A+++L ++P NS A+ L N+Y + GKW+D
Sbjct: 901 KMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKD 960
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A RK M VK G SW +I +VH F D HP+ D IY + K+ ++ G+
Sbjct: 961 ADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGY 1020
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
D DVE+++KE+ L +HSE++AIAFGLI+TP TTL+I+KNLRVC DCH+A K+
Sbjct: 1021 EADKG---LDVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKY 1077
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I ++ REI+VRD+ RFHHF G CSC+D W
Sbjct: 1078 ISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 150/589 (25%), Positives = 252/589 (42%), Gaps = 104/589 (17%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
+ L+ Y LLQS + S + GK H I GL +FL N L+N Y +
Sbjct: 23 ADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRC--------- 73
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
G L+ A +F+ M R+ VSWT +I + G F A
Sbjct: 74 ----------------------GSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAF 111
Query: 131 RMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL----SGCVNVTNS 185
+F M ++ P +T+ ++L +C DL+ G+ +H+ + + GL + V N+
Sbjct: 112 ALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNA 171
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
++NMYAK G A AVF + K DVV+W
Sbjct: 172 MINMYAKCGSLEDAIAVFLAIPEK-------------------------------DVVSW 200
Query: 246 NSMIAGYSQNGYDF-EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+M Y+Q + +AL +F ML L P+ T + L AC +L G +H+ +
Sbjct: 201 TAMAGAYAQERRFYPDALRIFREMLLQ-PLAPNVITFITALGACTSLRD---GTWLHSLL 256
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
NALI+ Y K G E A +
Sbjct: 257 HEASLGFDPLASNALINMYGKCGDWEGAYSVF---------------------------- 288
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML-SVSS 423
+ S ++ D+V+W AM+ + G + DA+ +FR + EG +PN+ TL +L ++++
Sbjct: 289 --KAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAA 346
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
S + H SG + + NA+I+MY+K G +AA VF I W+ + +SW
Sbjct: 347 SGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWN 406
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+M+ A + + F ML GI P+ ++++ +L AC++ ++ G++ ++++
Sbjct: 407 TMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTR 466
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP-DVVAWGSLLSA 591
+ S +V + G+ G + EA + MPL +V W +L A
Sbjct: 467 RRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 183/750 (24%), Positives = 303/750 (40%), Gaps = 193/750 (25%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLH----LSVFLKNSLMNFYA 59
PN +L++ +L + SR+ +G+ +HA I + GL + + N+++N YA
Sbjct: 125 PNSYTLVA-------MLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYA 177
Query: 60 KTESI-----------------------SYAK---------KVFDEMPVKTLC------- 80
K S+ +YA+ ++F EM ++ L
Sbjct: 178 KCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFI 237
Query: 81 ------------SW-----------------NTILSAYAKQGRLDLACEVFNLMPNR--- 108
+W N +++ Y K G + A VF M +R
Sbjct: 238 TALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQEL 297
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG-DLSAGKKV 167
D VSW +I E GR +A+ +F + + + P T+ ++L + A G D A +
Sbjct: 298 DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGF 357
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H + ++G V + N++++MYAK G A AVF +R K
Sbjct: 358 HGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKC----------------- 400
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EALGMFANMLKDSSLKPDKFTLASTLS 286
DV++WN+M+ G S++ F + + F +ML + + P+K + + L+
Sbjct: 401 -------------DVISWNTML-GASEDRKSFGKVVNTFHHMLL-AGIDPNKVSFIAILN 445
Query: 287 ACANLEKLKLGKQIHAYIIRTEFD-ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
AC+N E L G++IH+ I+ D V L+S Y K G + A+ + ++
Sbjct: 446 ACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEM------ 499
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
L R +V W ML Y QN +K+A M++
Sbjct: 500 -------------------------PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ 534
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G P+ + +++L SS + + L SG S+ + ALI+M+ + +
Sbjct: 535 GGVLPDALSFTSVL---SSCYCSQEAQVLRMCILESGYRSA-CLETALISMHGRCRELEQ 590
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC- 524
AR VFN + + VSWT+M+ A A++ +E LF RM G+ PD T L C
Sbjct: 591 ARSVFNEMD-HGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCL 649
Query: 525 ----------THGGLVEQG--------QRYYNMMKNVHKIKPTPSHFASMV--DLL---- 560
H + E G NM N + S F +M DL+
Sbjct: 650 ASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNI 709
Query: 561 -----GRAGLLQEAYNFIENMPLE---PDVVAWGSLLSACRVHKNLDLGK----IAAEKL 608
+AGL +EA M LE PD + + + L+ + GK +AAE
Sbjct: 710 MSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESG 769
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
L + D S A + L LY+ CGK ++A ++
Sbjct: 770 L--DSDVSVA-TGLVKLYAKCGKLDEAMSL 796
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 40/265 (15%)
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+A+L L GK H +G L + N LI MY + G++ A +F+ +
Sbjct: 29 TALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R VSWT++I A AQ G A LF M LE P+ T V +L AC + + G+
Sbjct: 89 RN-VVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 535 RYYNMM--KNVHKIKPTPSHFA-SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS- 590
+ M+ + + T + +M+++ + G L++A +P E DVV+W ++
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP-EKDVVSWTAMAGA 206
Query: 591 ----------ACRVHKNLDLGKIAAEKLLLIEP--------DNSGAYS------------ 620
A R+ + + L +A + I D + +S
Sbjct: 207 YAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPL 266
Query: 621 ---ALCNLYSSCGKWEDAANIRKSM 642
AL N+Y CG WE A ++ K+M
Sbjct: 267 ASNALINMYGKCGDWEGAYSVFKAM 291
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/572 (39%), Positives = 351/572 (61%), Gaps = 14/572 (2%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
LD AR F M + ++N++I S++ +AL +F M++D S++P+ FT S
Sbjct: 61 LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 120
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ-------S 339
AC E+L+ G+Q+H ++ D+ V + ++ Y G +E A ++ +
Sbjct: 121 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 180
Query: 340 GISYL------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
GI +V+ + ++DGY++IG++ AR +FD + R VV+W M+ GY Q+G
Sbjct: 181 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 240
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
K+AVE+FR M PN TL ++L S L +L+ GK +H A+R+ + +AL
Sbjct: 241 KEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSAL 300
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K G+I A +VF + ++ V+W+++I LA HG ++ + FE M G+ P
Sbjct: 301 IDMYAKCGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
+TY+G+L+AC+H GLV +G+ +++ M V ++P H+ MVDLLGRAGLL+E+ I
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWE 633
NMP++PD V W +LL AC++H N+++GK AE L+ + P +SG+Y AL N+Y+S G WE
Sbjct: 420 LNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWE 479
Query: 634 DAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMG 693
A +R MK + V+K G SW+++ +H F VED HP+ I++ + ++ + +G
Sbjct: 480 GVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVG 539
Query: 694 FVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIK 753
+ P+T VL +++E+ KE L +HSEK+AIAFGLIST T LRI KNLR+C DCHS+IK
Sbjct: 540 YRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIK 599
Query: 754 FICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I K+ R+I+VRD RFHHF G CSC DYW
Sbjct: 600 LISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 209/441 (47%), Gaps = 51/441 (11%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPT 144
SA + LD A ++F M + S+ T+I +E +A+ +F+EMV+D V P
Sbjct: 52 FSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPN 111
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG-----DEMMA 199
FT SV +C L G++VH VK GL V ++++ MY G +
Sbjct: 112 CFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFY 171
Query: 200 KAVF----DGMRLK------NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
+ VF DG+R K +V WNV++ ++ G L++AR FD+M +R VV+WN MI
Sbjct: 172 RRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMI 231
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
AGY+Q+G+ EA+ +F M + + + P+ TL S L A + L L+LGK +H Y +R
Sbjct: 232 AGYAQSGHFKEAVEVFREM-QMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNI 290
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+G+ALI YAK G +E A ++ E
Sbjct: 291 GVDDVLGSALIDMYAKCGSIEKALQVFE-------------------------------- 318
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
L R+VV W+ ++ G +G KD ++ F M R G P++ T +LS S ++
Sbjct: 319 -GLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVN 377
Query: 430 HGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+ +R SG + ++ + +AG + + + + + + V W +++ A
Sbjct: 378 EGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGA 437
Query: 489 LAQHGLGEEAIQLFERMLELG 509
HG E ++ E ++EL
Sbjct: 438 CKMHGNVEMGKRVAEHLMELA 458
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 152/355 (42%), Gaps = 52/355 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS---------- 81
G+ VH +K GL F+ ++++ Y + A ++F C
Sbjct: 131 GRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVD 190
Query: 82 -----WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
WN ++ Y + G L++A +F+ MP R VSW +I Y + G FK A+ +F EM
Sbjct: 191 GDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREM 250
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+V P T+ SVL + + LG L GK VH + V+ + + ++L++MYAK G
Sbjct: 251 QMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSI 310
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGY 252
A VF+G+ +NV +W+ +++ GR F+ M V VT+ +++
Sbjct: 311 EKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSAC 370
Query: 253 SQNGYDFEALGMFANMLKDSSL--------------------------------KPDKFT 280
S G E F +M++ S L KPD
Sbjct: 371 SHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVI 430
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
+ L AC +++GK++ +++ +G AL + YA +G E K+
Sbjct: 431 WKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSY-VALSNIYASLGNWEGVAKV 484
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 122/279 (43%), Gaps = 44/279 (15%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L+S L + L L GK VH ++ + + L ++L++ YAK S
Sbjct: 257 PNYVTLVSVLPAMSRLGALEL-------GKWVHLYAVRNNIGVDDVLGSALIDMYAKCGS 309
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A +VF+ +P + + +W+TI++ A GR
Sbjct: 310 IEKALQVFEGLPKRNVVTWSTIIAGLAMHGRA---------------------------- 341
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK-TGLSGCVNV 182
K+ + F +M + V+P+ T +L++C+ G ++ G+ +V+ +GL +
Sbjct: 342 ---KDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEH 398
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIE-- 239
++++ + G ++ + M +K + W ++ G +++ + + ++E
Sbjct: 399 YGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELA 458
Query: 240 -RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
D ++ ++ Y+ G ++E + M+K+ ++ D
Sbjct: 459 PHDSGSYVALSNIYASLG-NWEGVAKVRLMMKEMDVRKD 496
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/701 (34%), Positives = 384/701 (54%), Gaps = 80/701 (11%)
Query: 98 ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
A +F+ MP R+ V+WT ++ Y + + +FVEM++ P+ +T+ + L +C A
Sbjct: 92 ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151
Query: 158 LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
D+ GK+VH + +K G ++ NSL ++YAK+G
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGS---------------------- 189
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE-ALGMFANMLKDSSLKP 276
LD A F ++ E++V+TW +MI+ +++ E + +F +ML D + P
Sbjct: 190 ---------LDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVM-P 239
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
++FTL S +S C L LGKQ+ A+ + + PV N+ +
Sbjct: 240 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM---------------- 283
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ--NGLNK 394
YL Y++ G+ A R+F+ + D ++ W AM+ GY Q +
Sbjct: 284 ------YL-----------YLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD 326
Query: 395 D---------AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
D A+ +FR + R KP+ +T S++LSV S++ +L+ G+QIHA ++SG S
Sbjct: 327 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 386
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ V++AL+ MY+K G I A + F + R V+WTSMI +QHG +EAIQLFE M
Sbjct: 387 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSMISGYSQHGQPQEAIQLFEEM 445
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G++P+ IT+V +L+AC++ GLVE+ + Y++MMK + I+P H+ M+D+ R G
Sbjct: 446 RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGR 505
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
+++A++FI+ EP+ W SL++ CR H N++L AA+KLL ++P Y L N+
Sbjct: 506 VEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNM 565
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y S +W+D A +RK MK V + SW+ I++KV+ F D HPQ +Y + +
Sbjct: 566 YISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENL 625
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQM--LRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
++ K +G+ P + L D E+D K L+HHSE+LA+A GL+ TP T+R+ KN+
Sbjct: 626 LEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNIT 685
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+C DCHS+IK L +REI+VRD+ R H FK G CSC D+
Sbjct: 686 MCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 228/506 (45%), Gaps = 92/506 (18%)
Query: 20 LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTL 79
L + L S + +GK VH IK G + NSL + YAK S+ A + F +P K +
Sbjct: 146 LNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNV 205
Query: 80 CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
+W T++SA A+ D C E+G + +F++M+ D
Sbjct: 206 ITWTTMISACAE----DEECV---------------------ELG-----MSLFIDMLMD 235
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
V+P +FT+TSV++ C DL+ GK+V +F K G + V NS + +Y + G+ A
Sbjct: 236 GVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEA 295
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+F+ M ++ +WN ++ SG + + D + R F
Sbjct: 296 MRLFEQMEDASIITWNAMI-----SGYAQIMDSAKDDLQAR---------------SRGF 335
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+AL +F + LK S +KPD FT +S LS C+ + L+ G+QIHA I++ F + V +AL
Sbjct: 336 QALTIFRD-LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 394
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
++ Y K G ++ A K AF + P R V
Sbjct: 395 VNMYNKCGCIQDANK-------------AFLEM-----------PTRTF---------VT 421
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
WT+M+ GY Q+G ++A++LF M G +PN T ++LS S ++ + H +
Sbjct: 422 WTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAE--HYFDM 479
Query: 440 RSGEASSLSVSN---ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
E V + +I M+ + G + A + W+S++ HG E
Sbjct: 480 MKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 539
Query: 497 EAIQLFERMLELGIKPDHI-TYVGVL 521
A +++LEL KP I TY+ +L
Sbjct: 540 LAFYAADKLLEL--KPKGIETYILLL 563
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/682 (35%), Positives = 377/682 (55%), Gaps = 80/682 (11%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
PN + S T + + +G+ N+ + +VQ V ++SCT++ SA
Sbjct: 112 FPNSSNDSTRTKVAVF--LGKLHNSSLLADSIVQSLVF--------AISSCTSVSYCSA- 160
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVG-DEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
+H+ V+K+ + + L++MY K+G DE D RL
Sbjct: 161 --IHARVIKSLNYSDGFIGDRLVSMYFKLGYDE-------DAQRL--------------- 196
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
FD+M RD+V+WNS+++G S GY L F M +S +P++ TL S
Sbjct: 197 ----------FDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLS 246
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+SACA + L GK +H +++ V N+LI+ Y K+G
Sbjct: 247 VVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG---------------- 290
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
LD A ++F+ + R +V+W +M+V + NG + ++LF M
Sbjct: 291 --------FLDA---------ASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 333
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
R G P+ T+ A+L + + IHA R G + + ++ AL+ +Y+K G +
Sbjct: 334 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 393
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
NA+ +F I R +T++WT+M+ A H G EAI+LF+ M++ G++ DH+T+ +L+A
Sbjct: 394 NASEDIFEEIKDR-DTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 452
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLVE+G++Y+ +M V++++P H++ MVDLLGR+G L++AY I++MP+EP
Sbjct: 453 CSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSG 512
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
WG+LL ACRV+ N++LGK AE+LL ++P + Y L N+YS+ G W A+ +R MK
Sbjct: 513 VWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMK 572
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
+ + G S+++ NK+H F V D LHP+ D I+ K+ ++ +I E G P T VLH
Sbjct: 573 ERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLH 632
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
D++E+VK M+ HSEKLAIAFGL+ T L I KNLR+C DCHS KF L R I
Sbjct: 633 DIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTI 692
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
++RD+ RFHHF GLCSCRDYW
Sbjct: 693 IIRDSKRFHHFADGLCSCRDYW 714
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 215/463 (46%), Gaps = 72/463 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQV 141
+ ++S Y K G + A +F+ MPNRD VSW +++ + G + F M +
Sbjct: 178 DRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 237
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P + T+ SV+++C +G L GK +H VVK G+SG V NSL+NMY K+G A
Sbjct: 238 QPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 297
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F+ M ++++ SWN +V +H H+ GY++ G D
Sbjct: 298 LFEEMPVRSLVSWNSMVVIHNHN--------------------------GYAEKGMD--- 328
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
N++K + + PD+ T+ + L AC + + + IHAYI R F+A + AL++
Sbjct: 329 ---LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLN 385
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK+G + ++ I E+ ++DRD +AWT
Sbjct: 386 LYAKLGRLNASEDIFEE---------------------------------IKDRDTIAWT 412
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK---QIHASA 438
AML GY + ++A++LF MV+EG + ++ T + +LS S ++ GK +I +
Sbjct: 413 AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV 472
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
R L + ++ + ++G + A + + + W +++ A +G E
Sbjct: 473 YRV--EPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELG 530
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
++ E++L L DH Y+ + + GL + +MK
Sbjct: 531 KEVAEQLLSLD-PSDHRNYIMLSNIYSAAGLWRXASKVRXLMK 572
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/544 (39%), Positives = 337/544 (61%), Gaps = 5/544 (0%)
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKLGKQIH 301
V WN++I+G+++ G E+ G F +M + + P T S LSAC + LG Q+H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMAR-AGAAPTPVTYVSVLSACGKGTRDVLLGMQVH 146
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
++ + V NAL+ YA+ + A K+ + G+ +V+++T+LL G ++G
Sbjct: 147 GRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFD--GMQVRSVVSWTSLLSGLARLGQ 204
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ AR +FD + +RD V+WTAM+ GY ++A+E+FR M + +T+ ++++
Sbjct: 205 VDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITA 264
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L +L+ G+ + R G V NALI MYSK G+I A VF +H R + +
Sbjct: 265 CAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHR-DKFT 323
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
WT++I+ LA +G EEAI++F RM+ + PD +T++GVLTACTH GLV++G+ ++ M
Sbjct: 324 WTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMI 383
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
+ I P H+ ++DLLGRAG + EA + I+ MP+ P+ WG+LL+ACRVH N ++G
Sbjct: 384 EAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIG 443
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
++ AE+LL ++P+NS Y L N+Y+ C +WED +R ++ G+KK G S +++
Sbjct: 444 ELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGI 503
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
+H F D HP IY+K+ I ++ +G+ PD V +V E K+++L HSEKL
Sbjct: 504 IHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKL 563
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AIAF L+S+ NT +RI+KNLR+C DCH+AIK I +L RE+VVRD TRFHHF+ G CSC
Sbjct: 564 AIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSC 623
Query: 782 RDYW 785
+DYW
Sbjct: 624 KDYW 627
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 199/400 (49%), Gaps = 36/400 (9%)
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASC-TALGDLSAGKKVHS 169
V+W +I +N GRF + FV+M + PT T SVL++C D+ G +VH
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
VV +G+ + V N+L++MYA+ D A VFDGM++++V SW ++S G++D
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD+M ERD V+W +MI GY EAL MF M + S++ D+FT+ S ++ACA
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREM-QYSNVSADEFTMVSVITACA 266
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L L++G+ + Y+ R VGNALI Y+K G +E A
Sbjct: 267 QLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERA----------------- 309
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
LD +F + RD WTA+++G NG ++A+E+F M+R
Sbjct: 310 ---LD-------------VFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSET 353
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARR 468
P+ T +L+ + +D G++ S + + A ++ +I + +AG I A
Sbjct: 354 PDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALD 413
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ + + W +++ A HG E + ER+LEL
Sbjct: 414 TIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLEL 453
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 152/295 (51%), Gaps = 32/295 (10%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
+P+ + + L +R+ +G VH R++ G+ + ++N+L++ YA+ + A KV
Sbjct: 121 TPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKV 180
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD M V+++ SW ++LS A+ G++D A ++F+ MP RD+VSWT +I Y RF+ A+
Sbjct: 181 FDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREAL 240
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
MF EM V +FT+ SV+ +C LG L G+ V ++ + G+ V N+L++MY
Sbjct: 241 EMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 300
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K G A VF GM RD TW ++I
Sbjct: 301 SKCGSIERALDVFKGMH-------------------------------HRDKFTWTAIIL 329
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
G + NGY+ EA+ MF M++ S PD+ T L+AC + + G++ +I
Sbjct: 330 GLAVNGYEEEAIEMFHRMIRVSE-TPDEVTFIGVLTACTHAGLVDKGREFFLSMI 383
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 153/382 (40%), Gaps = 86/382 (22%)
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA----SLDHGKQIHASALRSGEASSLSV 449
+DAV + M+ G +P+ YT A+L + A S + +HA +R G + V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+++L+ Y+ L+ V+W ++I + G E+ F M G
Sbjct: 61 ASSLVAAYTAG---GDGAAARALVGECDTPVAWNALISGHNRGGRFGESCGSFVDMARAG 117
Query: 510 IKPDHITYVGVLTAC------------THGGLVEQG----QRYYNMMKNVH--------- 544
P +TYV VL+AC HG +V G R N + +++
Sbjct: 118 AAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSA 177
Query: 545 -------KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS----ACR 593
+++ S + S++ L R G + EA + + MP E D V+W +++ A R
Sbjct: 178 WKVFDGMQVRSVVS-WTSLLSGLARLGQVDEARDLFDRMP-ERDTVSWTAMIDGYVWAAR 235
Query: 594 VHKNLDLGK------IAAEKLLLIEPDNSGAY--------------------------SA 621
+ L++ + ++A++ ++ + A +A
Sbjct: 236 FREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNA 295
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L ++YS CG E A ++ K M + F+W I + V G E+ + ++++
Sbjct: 296 LIDMYSKCGSIERALDVFKGMHH-----RDKFTWTAIILGLAVNGYEE----EAIEMFHR 346
Query: 682 MAKIWDEIKEMGFVPDTASVLH 703
M ++ + E+ F+ + H
Sbjct: 347 MIRVSETPDEVTFIGVLTACTH 368
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 384/708 (54%), Gaps = 70/708 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C N++LS YA+ G + A VF+ MP RD +SW +++ ++ E G++ +AI + VEM++
Sbjct: 487 VCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLK 546
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ T T+ L++C L L K VH+FV+ + + + N+L+ MY K G
Sbjct: 547 TRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFG---- 599
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+D A+ M ERDVVTWN++I G++ +
Sbjct: 600 ---------------------------LMDEAQKVCKIMPERDVVTWNALIGGHADDKDP 632
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL-KLGKQIHAYIIRTEFDATGPVGN 317
+ F N+++ L + T+ + L C + + L K G IHA+I+ F+ V +
Sbjct: 633 NATIQAF-NLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQS 691
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YA+ G D+ + IFD L +++
Sbjct: 692 SLITMYAQCG---------------------------------DLNTSSYIFDVLANKNS 718
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
W A+ G ++A++ M +G + ++ S L+ +L LD G+Q+H+
Sbjct: 719 STWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSW 778
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
++ G V NA + MY K G I+ R+ + R + SW +I ALA+HG +
Sbjct: 779 IIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKR-SWNILISALARHGFFRQ 837
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A + F ML+LG+KPDH+T+V +L+AC+HGGLV++G Y++ M + + H ++
Sbjct: 838 ATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCII 897
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGR+G L EA FI+ MP+ P+ W SLL+AC+VH NL+LG+ AA++L + +
Sbjct: 898 DLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDS 957
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY N+ +S +W D N+RK M+ +KK SW++++NKV FG+ D HPQ
Sbjct: 958 AYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQ 1017
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ +E G +PDT+ L D +E+ KE L +HSE++A+AFGLI++ E + LR
Sbjct: 1018 IYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLR 1077
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLRVC DCHS K + K+V R+IVVRD+ RFHHF G CSC DYW
Sbjct: 1078 IFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 246/544 (45%), Gaps = 103/544 (18%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S + ++ A VFN M RD++SW +II GRF+ ++ F M +
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T++++L +C + L G+ +H + K+GL V V NSLL+MYA+ G A+ V
Sbjct: 450 TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M RD+++WNSM+A + ++G A+
Sbjct: 510 -------------------------------FHTMPARDLISWNSMMASHVEDGKYSHAI 538
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ MLK + + T + LSAC NLEKLK+ +HA++I +GN L++
Sbjct: 539 LLLVEMLK-TRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTM 594
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G L+D K+ I P +RDVV W A
Sbjct: 595 YGKFG------------------------LMDEAQKVCKIMP---------ERDVVTWNA 621
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS-LDHGKQIHASALRS 441
++ G+ + ++ F M REG N T+ +L S L HG IHA + +
Sbjct: 622 LIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVA 681
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G V ++LITMY++ G++N + +F+++ + + +W ++ A A +G GEEA++
Sbjct: 682 GFELDTYVQSSLITMYAQCGDLNTSSYIFDVLA-NKNSSTWNAIFSANAHYGPGEEALKF 740
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM---------------------- 539
RM G+ D ++ L + ++++GQ+ ++
Sbjct: 741 IARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGK 800
Query: 540 ---MKNVHKIKPTPS-----HFASMVDLLGRAGLLQ---EAYNFIENMPLEPDVVAWGSL 588
+ +V +I P P + ++ L R G + EA++ + ++ L+PD V + SL
Sbjct: 801 CGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSL 860
Query: 589 LSAC 592
LSAC
Sbjct: 861 LSAC 864
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 271/599 (45%), Gaps = 95/599 (15%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIK-CGLHLSVFLKNSLMNFY-AKTES 63
PP+ SPL + L++ +K N F+ +H I +S FL+
Sbjct: 109 PPTPYSPLLNCQNQLETCVK-ENEFLSYGIHTFIRNHSNPQVSRFLQKGFSEISEGNVGK 167
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+A V D + T + NT+++ Y+K G + A VF+ M +R+ SW +I + +
Sbjct: 168 ALHALCVKDVIQQNTFYT-NTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRV 226
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG-KKVHSFVVKTGLSGCVNV 182
G + A++ F M ++ V P+ + + S++ +C G ++ G +++H +VVK GL V V
Sbjct: 227 GWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFV 286
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
SLL+ Y G + A F+++ E ++
Sbjct: 287 GTSLLHFYGT-------------------------------HGSVSEANKLFEEIEEPNI 315
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V+W S++ Y+ NG+ E L ++ + L+ + L T+A+ + C +G QI
Sbjct: 316 VSWTSLMVCYADNGHTKEVLNIYRH-LRHNGLICTGNTMATVIRTCGMFGDKTMGYQILG 374
Query: 303 YIIRTEFDATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+I++ D + V N+LIS + VE
Sbjct: 375 DVIKSGLDTSSVSVANSLISMFGNYDSVE------------------------------- 403
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
A R+F+++++RD ++W +++ NG ++++ F M R PK + T+SA+L
Sbjct: 404 --EASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPA 461
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S L G+ +H +SG S++ V N+L++MY++AG+ A VF+ + R + +S
Sbjct: 462 CGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR-DLIS 520
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W SM+ + + G AI L ML+ +++T+ L+AC YN+ K
Sbjct: 521 WNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSAC------------YNLEK 568
Query: 542 NVHKIKPTPSHFA---------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + HFA ++V + G+ GL+ EA + MP E DVV W +L+
Sbjct: 569 -LKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG 625
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 214/453 (47%), Gaps = 75/453 (16%)
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
+ GK +H+ VK + TN+L+NMY+K G A+ VF
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVF------------------ 205
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
D+M +R+ +WN+MI+G+ + G+ +A+ F +M ++ + P + +
Sbjct: 206 -------------DKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENG-VTPSSYVI 251
Query: 282 ASTLSACANLEKLKLG-KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
AS ++AC + G +QIH Y+++ L+S
Sbjct: 252 ASMVTACDRSGCMTEGARQIHGYVVKC----------GLMS------------------- 282
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
NV T+LL Y G + A ++F+ + + ++V+WT+++V Y NG K+ + ++
Sbjct: 283 ----NVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIY 338
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EASSLSVSNALITMYSK 459
R + G T++ ++ G QI ++SG + SS+SV+N+LI+M+
Sbjct: 339 RHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGN 398
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
++ A RVFN + R +T+SW S+I A A +G EE++ F M K D+IT
Sbjct: 399 YDSVEEASRVFNNMQER-DTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISA 457
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
+L AC ++ G+ + ++ ++ S++ + +AG ++A MP
Sbjct: 458 LLPACGSAQHLKWGRGLHGLITK-SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR 516
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
D+++W S++++ +++ GK + LLL+E
Sbjct: 517 -DLISWNSMMAS-----HVEDGKYSHAILLLVE 543
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/763 (33%), Positives = 409/763 (53%), Gaps = 106/763 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
GK VHA + GL VFL NSL + YA + A++VFD SWN++LS Y
Sbjct: 121 TGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYV 180
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + +VF+LM + + W + F + S
Sbjct: 181 RAGAREETLKVFSLMCHH-GLGWNS------------------------------FALGS 209
Query: 151 VLASCTALGDLSA--GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++ C + D+ + VH VVK GL + + +++++MYAK G A A+F
Sbjct: 210 IIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALF----- 264
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN----GYDF--EAL 262
K+V NV+V +N+MIAG+ ++ G + EAL
Sbjct: 265 KSVPDPNVIV--------------------------FNAMIAGFCRDEAAVGKEVSREAL 298
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+++ M + ++P +FT +S L AC + GKQIH +++ F +G+ALI
Sbjct: 299 SLYSEM-QSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDL 357
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+ G +E DGY R F SL +D+V WT+
Sbjct: 358 YSDSGCME-----------------------DGY----------RCFRSLPKQDIVTWTS 384
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G QN L + A+ LF+ + G KP+ +T+S++++ +SLA G+QI A++ G
Sbjct: 385 MISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYG 444
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ N+ I M +++G+++A R F + R + VSW+++I + AQHG +A+++F
Sbjct: 445 FNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESR-DVVSWSAVISSHAQHGCARDALRIF 503
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M+ + P+ +T++ VLTAC+HGGLV+ G RYY +MKN + + PT H +VDLLGR
Sbjct: 504 NEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGR 563
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L +A FI + D V W SLL++CR+H +++ G++ A++++ +EP +S +Y L
Sbjct: 564 AGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVIL 623
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y G+ A+ R MK GVKK G SW+++++ VH F D HP+ +AIY K+
Sbjct: 624 YNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKL 683
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
A++ +I+++ D AS D ++ ++ HSEK+A+AFG+I P++ +R+MKNL
Sbjct: 684 AEMLSKIEKLANT-DNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNL 742
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHS +K I +REI++RD RFHHF+ G CSC DYW
Sbjct: 743 RVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 201/450 (44%), Gaps = 76/450 (16%)
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L SCTAL ++A VH+ + + + + + NSLL Y ++G
Sbjct: 8 LLRSCTALPHVAA---VHAHIARAHPTASLFLRNSLLAAYCRLG---------------- 48
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +H+ RL D+M R+ V++N +I+ YS+ G AL FA
Sbjct: 49 -------VGAPLHAARL------IDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARA 95
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ L+ D+FT A+ L+AC+ L+ GK +HA + + N+L S YA G +
Sbjct: 96 AAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMG 155
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A+++ FD+ + D V+W ++L GY +
Sbjct: 156 EARRV---------------------------------FDAAEEHDDVSWNSLLSGYVRA 182
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH--GKQIHASALRSGEASSLS 448
G ++ +++F M G N++ L +++ +S + + + +H +++G + L
Sbjct: 183 GAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLF 242
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ------HGLGEEAIQLF 502
+++A+I MY+K G + A +F + + + +MI + + EA+ L+
Sbjct: 243 LASAMIDMYAKRGALTNAVALFKSVP-DPNVIVFNAMIAGFCRDEAAVGKEVSREALSLY 301
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M G++P T+ +L AC G G++ + + H ++++DL
Sbjct: 302 SEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLK-HSFHDDDYIGSALIDLYSD 360
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
+G +++ Y ++P + D+V W S++S C
Sbjct: 361 SGCMEDGYRCFRSLP-KQDIVTWTSMISGC 389
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG---NINAARRVFNLIHW 475
L + S +L H +HA R+ +SL + N+L+ Y + G ++AAR + +
Sbjct: 6 LDLLRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMP-- 63
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLF-ERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R+ VS+ +I + ++ GL A++ F G++ D TY L AC+ + G+
Sbjct: 64 RRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGK 123
Query: 535 RYYNM--MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ M + + + ASM G G + ++ E E D V+W SLLS
Sbjct: 124 AVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAE----EHDDVSWNSLLSG 178
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/590 (38%), Positives = 352/590 (59%), Gaps = 37/590 (6%)
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGR-LDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A A+ + +V S+N +V+ S R L ARA FD+M RD +W+++++ + ++G
Sbjct: 80 ALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQ 139
Query: 258 DFEALGMFANMLKD--SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
AL ++ ML++ S ++FT +S L+A + G+++H +++R DA
Sbjct: 140 PRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDA---- 195
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+ + ++ L D Y K G + AR +FD + R
Sbjct: 196 -----------------------------DAVVWSALADMYAKFGRLDDARSVFDRMPVR 226
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVV+WTAML Y G + + LF M+R G PN +T + +L + S GKQ+H
Sbjct: 227 DVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVH 286
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+S S +AL+ MYSK G++ A RVF + + + VSWT+MI AQ+G
Sbjct: 287 GRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMP-KPDLVSWTAMISGYAQNGQP 345
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+EA+ F+ +L G +PDH+T+VGVL+AC H GLV++G ++ +K+ + I+ T H+A
Sbjct: 346 DEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYAC 405
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
++DLL R+GL + A + I MP++P+ W SLL CR+HKN+ L AAE L IEP+N
Sbjct: 406 VIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPEN 465
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
Y L N+Y+S G +++ N+R++M+ G+ K SW+++ +VHVF V D HPQ
Sbjct: 466 PATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQA 525
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ IY + K++ +++E G+V DT VLHDVE++ K+Q + +HSE+LA+AFG+I+TP+ +
Sbjct: 526 EEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSP 585
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++ KNLR+C DCH+ IK I K+V REI+VRD+ RFHHFK G CSCRDYW
Sbjct: 586 IKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 223/502 (44%), Gaps = 74/502 (14%)
Query: 47 SVFLKNSLMNFYAK-TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR-LDLACEVFNL 104
S L N +++ + ++ A + +P +CS+NT+++A + R L A +F+
Sbjct: 59 STLLSNRILHLLSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDR 118
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD---QVLPTQFTVTSVLASCTALGDL 161
MP RD SW+ I+ + G+ + A+ ++ M+++ +FT +S LA+ TA
Sbjct: 119 MPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCA 178
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
AG+++H VV+ G+ V ++L +MYAK G
Sbjct: 179 RAGRELHCHVVRRGIDADAVVWSALADMYAKFG--------------------------- 211
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
RLD AR+ FD+M RDVV+W +M+ Y G D E +F M++ S + P++FT
Sbjct: 212 ----RLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMR-SGILPNEFTY 266
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
A L ACA KLGKQ+H + ++ + G+AL+ Y+K G + A ++ G+
Sbjct: 267 AGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFR--GM 324
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
+++++T ++ G Y QNG +A+ F
Sbjct: 325 PKPDLVSWTAMISG-------------------------------YAQNGQPDEALHCFD 353
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRSGEASSLSVSNALITMYSKA 460
++ G +P++ T +LS + +D G I H+ + G + +I + S++
Sbjct: 354 MLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRS 413
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH-ITYVG 519
G A + N + + W S++ H A E + E I+P++ TYV
Sbjct: 414 GLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFE--IEPENPATYVT 471
Query: 520 VLTACTHGGLVEQGQRYYNMMK 541
+ GL ++ + M+
Sbjct: 472 LANIYASVGLFDEVENMRRTME 493
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P EF YA +L++ + + +GK VH R+ K S F ++L++ Y+K +
Sbjct: 257 SGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGT 316
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM 105
A +VF MP L SW ++S YA+ G+ D A F+++
Sbjct: 317 AMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDML 355
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/780 (31%), Positives = 424/780 (54%), Gaps = 96/780 (12%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
Y LL +++ + +H ++K G +F+ SL+N Y + S A+++FD M
Sbjct: 78 MYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGM 137
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P +++ V+WT +I + A+ +FV
Sbjct: 138 P-------------------------------DKNVVTWTALITGHTLNSEPALALEVFV 166
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM++ P+ +T+ +L++C+A + G++VH + +K G ++ NSL +Y K G
Sbjct: 167 EMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSG 226
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
D + G+R F +++V+TW +MI+ ++
Sbjct: 227 D------LESGLR-------------------------AFKGTPDKNVITWTTMISSCAE 255
Query: 255 N-GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+ Y L +F +ML + + P++FTL S +S C + LGKQ+ A+ + +A
Sbjct: 256 DENYLDLGLSLFLDML-EGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANL 314
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
PV N+ + Y + G + A ++ E+ S ++I + ++ GY +I DS +
Sbjct: 315 PVKNSTMYLYLRKGETDEAMRLFEEMDSS--SIITWNAMISGYAQI---------MDSAK 363
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D D+ A + G++ A++LFR +VR KP+ +T S++LSV S++ +L+ G+Q
Sbjct: 364 D-DLHARSR---GFQ-------ALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQ 412
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IHA+ +++G S + V++AL+ MY+K G+I A + F + R V+WTSMI +QHG
Sbjct: 413 IHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRT-PVTWTSMISGYSQHG 471
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
++AIQLFE M+ G +P+ IT+V +L+AC++ GLVE+ +RY++MM+N + I+P H+
Sbjct: 472 RSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHY 531
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
MVD+ R G L +A++FI+ EP+ W SL++ CR H N++L AA++LL ++P
Sbjct: 532 GCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKP 591
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
Y L N+Y S G+W D A +RK K+ V + SW+ I++KV+ F +D HP
Sbjct: 592 KVIETYVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHP 651
Query: 674 QRDAIYNKMAKIWDEIKEMGFVP--DTASVLHDVEEDVKEQ-------MLRHHSEKLAIA 724
Q +Y + + ++ K +G+ P + +L D +E ++ +++HHSE+LA+A
Sbjct: 652 QATELYQLLENLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVA 711
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
GL+ TP T+R+ KN+ +C DCHS+IK+ L +REIVVRD+ R H FK G CSC D+
Sbjct: 712 LGLLETPPGATVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 344/559 (61%), Gaps = 4/559 (0%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+D A F Q+ ++ +N+MI G+S + +A + + L PD T +
Sbjct: 69 IDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQR-QGLLPDNLTFPFLVK 127
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
+C L + +G Q H +II+ F+ V N+L+ YA G E A I ++ + Y++V
Sbjct: 128 SCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQR--MYYVDV 185
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+++T+++ G+ K GD+ AR++FD + ++++V W+ M+ GY QN AVELF+ + +
Sbjct: 186 VSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQ 245
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G + N + +++S + L +L+ G++ H +++G +L + AL+ MY++ G+I+ A
Sbjct: 246 GVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKA 305
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
VF + R +T+SWT++I LA HG E +++ F M+E G+ P IT+ VL+AC+H
Sbjct: 306 VWVFEDLPER-DTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSH 364
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
GGLVE+G + + MK H+++P H+ MVDLLGRAG L+EA F+ MP++P+ WG
Sbjct: 365 GGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWG 424
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LL ACR+HKN ++G+ + L+ + P +SG Y L N+Y++ +WE +R+ MK G
Sbjct: 425 ALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKG 484
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+KK G S +++ +VH F + D HP+ D I +I I+ G+ +TA L D++
Sbjct: 485 LKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDID 544
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E+ KE L HSEKLAIAFG++ + T +RI+KNLRVC DCH+A K I K+ RE++VR
Sbjct: 545 EEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVR 604
Query: 767 DATRFHHFKKGLCSCRDYW 785
D RFHHF++GLCSC DYW
Sbjct: 605 DRNRFHHFRQGLCSCMDYW 623
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 237/538 (44%), Gaps = 80/538 (14%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTES----ISYAKKVFDEMPVKTLCSWNTILSA 88
K++HA +I+ + VF + L+ F S I YA ++F ++ L +N ++
Sbjct: 34 KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRG 93
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
++ D A +V+ + +LP T
Sbjct: 94 HSGSKNPD-------------------------------QAFHFYVQSQRQGLLPDNLTF 122
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++ SCT L +S G + H ++K G V V NSL++MYA GD A +F M
Sbjct: 123 PFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYY 182
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+V SW ++ G ++ AR FDQM E+++VTW++MI+GY+QN + +A+ +F +
Sbjct: 183 VDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELF-KV 241
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L+ ++ ++ + S +S+CA+L L+LG++ H Y+++ +G AL+ YA+ G
Sbjct: 242 LQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGS 301
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
++ A +F+ L +RD ++WTA++ G
Sbjct: 302 ID---------------------------------KAVWVFEDLPERDTLSWTALIAGLA 328
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS-L 447
+G ++ +++ F +MV G P + T +A+LS S ++ G QI S R L
Sbjct: 329 MHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRL 388
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFER 504
++ + +AG + A R + + W +++ A H +GE ++ +
Sbjct: 389 EHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQ 448
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+L P H Y +L+ + M +K P H S+++L GR
Sbjct: 449 LL-----PQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGH--SLIELDGR 499
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 37/295 (12%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
P +L P L++S K +G H IIK G V+++NSL++ YA
Sbjct: 117 PDNLTFPF-----LVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTE 171
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A +F M + SW +++ + K G ++ A ++F+ MP ++ V+W+T+I Y +
Sbjct: 172 AATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNH 231
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
F A+ +F + V + + SV++SC LG L G++ H +VVK G++ + + +
Sbjct: 232 FDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTA 291
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYA+ G +D A F+ + ERD ++W
Sbjct: 292 LVDMYARCGS-------------------------------IDKAVWVFEDLPERDTLSW 320
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
++IAG + +GY +L FA M+ ++ L P T + LSAC++ ++ G QI
Sbjct: 321 TALIAGLAMHGYSERSLKYFATMV-EAGLTPRDITFTAVLSACSHGGLVERGFQI 374
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/592 (40%), Positives = 344/592 (58%), Gaps = 41/592 (6%)
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD++ +++VV +N MI Y N +AL +F NM + PD +T L A +
Sbjct: 91 RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM-AGHGIDPDHYTYPCVLKASSG 149
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
E L +G QIHA ++R D VGN LIS Y K G + A ++++Q + +V+++
Sbjct: 150 SEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQ--MPCRDVVSWN 207
Query: 351 TLLDGYIKIG-------------------DIG------PA------------RRIFDSLR 373
+L+ G + G D G PA + +F L
Sbjct: 208 SLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLA 267
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++ +V+W M+ Y N + +AV++F M P+ +++++L L++L G++
Sbjct: 268 NKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRR 327
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
IH +R +L + NALI MY+K G + AR VF+ + +R + VSWTSMI A +G
Sbjct: 328 IHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-DVVSWTSMISAYGMNG 386
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G +A+ LF RM +LG+ PD I +V VL+AC+H GL+++G+ Y+ +M KI P HF
Sbjct: 387 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHF 446
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
MVDLLGRAG + EAY FI+ MP+EP+ WG+LLSACRV+ N+ +G +AA++L + P
Sbjct: 447 VCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCP 506
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
+ SG Y L N+Y+ G+WED +R MK G+KK G S ++ N+VH F D HP
Sbjct: 507 EQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHP 566
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
Q IY ++ ++KE G+VP+T S LHDVEE+ KE L HSEKLAIAF +++T
Sbjct: 567 QSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPG 626
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +RI KNLRVC DCH A K I K+V REI +RD RFHHF G+CSC DYW
Sbjct: 627 SPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 187/427 (43%), Gaps = 76/427 (17%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT-----ILSAYAKQGRLDLACEVF 102
V +N K I Y KK+ ++ + N ++ AYA G +F
Sbjct: 35 VLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIF 94
Query: 103 NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS 162
+ +P ++ V + +I +Y + +A+ +F M + P +T VL + + DL
Sbjct: 95 DEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 154
Query: 163 AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI 222
G ++H+ VV+ GL V V N L++MY K G + A V D M ++V SWN +V+
Sbjct: 155 VGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCA 214
Query: 223 HSGRLDLA-------------------------------------RAQFDQMIERDVVTW 245
+G+ D A + F ++ + +V+W
Sbjct: 215 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSW 274
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N MIA Y N EA+ +F M +D ++ PD ++AS L AC +L L LG++IH Y++
Sbjct: 275 NVMIAVYMNNSMPAEAVDIFLQM-EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVV 333
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R + NALI YAK G +E A+++ +Q
Sbjct: 334 RKRLQPNLLLENALIDMYAKCGCLEYAREVFDQ--------------------------- 366
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
++ RDVV+WT+M+ Y NG +DAV LF M G P++ ++LS S
Sbjct: 367 ------MKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHA 420
Query: 426 ASLDHGK 432
LD G+
Sbjct: 421 GLLDEGR 427
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 69/320 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L+++ S + +VG +HA +++ GL L+VF+ N L++ Y K + A +V D+MP
Sbjct: 140 YPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMP 199
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEV---------------------------------- 101
+ + SWN++++ A+ G+ D A EV
Sbjct: 200 CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFV 259
Query: 102 ---FNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
F + N+ VSW +I Y A+ +F++M V P ++ SVL +C L
Sbjct: 260 KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 319
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
L G+++H +VV+ L + + N+L++MYAK G A+ VFD M+ ++V SW
Sbjct: 320 SALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW---- 375
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
SMI+ Y NG +A+ +F+ M +D L PD
Sbjct: 376 ---------------------------TSMISAYGMNGKGRDAVSLFSRM-QDLGLNPDS 407
Query: 279 FTLASTLSACANLEKLKLGK 298
S LSAC++ L G+
Sbjct: 408 IAFVSVLSACSHAGLLDEGR 427
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 267/793 (33%), Positives = 415/793 (52%), Gaps = 115/793 (14%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
TP PP L+ YA L Q+ + + G+ LH +FL N +F
Sbjct: 54 TP-PPPLVHSHHTYAALFQACARRSSLPEGQ---------ALHRHMFLHNPNSDF----- 98
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
L N +++ YAK G LD A ++F+ MP ++ VSWT ++ Y +
Sbjct: 99 ---------------NLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQ 143
Query: 123 IGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
GR R+F M + Q PT+F SV+++C GD + G++VH+ +KT CV
Sbjct: 144 HGRSNECFRVFRGMLIWHQ--PTEFAFASVISACG--GDDNCGRQVHALALKTSFDSCVY 199
Query: 182 VTNSLLNMYAKV---GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
V N+L+ MY K DE +WNV ++ M
Sbjct: 200 VGNALIMMYCKSCGGADE----------------AWNV-----------------YEAMG 226
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA-CANLEKLKLG 297
R++V+WNSMIAG+ G AL +F+ M ++ D+ TL S S C + L+
Sbjct: 227 FRNLVSWNSMIAGFQVCGCGNRALELFSQM-HVGGIRFDRATLVSIFSCLCGMGDGLECC 285
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
Q+ I+T F V AL+ Y+ +GG
Sbjct: 286 FQLQCLTIKTGFILKIEVATALVKAYSSLGG----------------------------- 316
Query: 358 KIGDIGPARRIFDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
++ RIF L R DVV+WT ++ + + K A+ +FR +RE P+ + S
Sbjct: 317 ---EVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKKALVIFRQFLRECLAPDRHMFS 372
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L + LA+ H + + L+ G + ++NALI ++ G++ +++VF+ + R
Sbjct: 373 IVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSR 432
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+TVSW SM+ A A HG G+EA+ LF +M +PD T+V +L+AC+H G+ E+G +
Sbjct: 433 -DTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKI 488
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
+ M N H I P H+A MVD+LGRAG + EA I+ MP+EPD V W +LL +CR H
Sbjct: 489 FETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHG 548
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
L K+AA KL ++P+NS Y + N++ + G++ +A IR+ M+ V+K G SW+
Sbjct: 549 ETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWI 608
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
++ N+VH F HP+++AI ++ ++ +K++G+VP + LHD+E++ KE+ L +
Sbjct: 609 EVGNQVHEFASGGQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYY 668
Query: 717 HSEKLAIAFGLISTP----ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
HSEKLA+AF L++ T++IMKN+R+C DCH+ +K +LVD EIVVRD+ RFH
Sbjct: 669 HSEKLALAFALMNVGSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFH 728
Query: 773 HFKKGLCSCRDYW 785
HFK +CSC DYW
Sbjct: 729 HFKAKVCSCNDYW 741
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII--RTEFDATG 313
G+ EAL +F ++ L T A+ ACA L G+ +H ++ D
Sbjct: 41 GHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNL 100
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ N +++ YAK G ++ A ++ ++ + N++++T L+ GY + G R+F
Sbjct: 101 FLTNHVVNMYAKCGSLDYAHQMFDE--MPEKNIVSWTALVSGYAQHGRSNECFRVF---- 154
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
R ++ W +P + ++++S + G+Q
Sbjct: 155 -RGMLIWH---------------------------QPTEFAFASVISACG--GDDNCGRQ 184
Query: 434 IHASALRSGEASSLSVSNALITMYSKA-GNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+HA AL++ S + V NALI MY K+ G + A V+ + +R VSW SMI
Sbjct: 185 VHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRN-LVSWNSMIAGFQVC 243
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTA-CTHGGLVE---QGQRYYNMMKNVHKIKP 548
G G A++LF +M GI+ D T V + + C G +E Q Q + KI+
Sbjct: 244 GCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEV 303
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + L G + + Y + DVV+W +++A
Sbjct: 304 ATALVKAYSSL---GGEVSDCYRIFLELDGRQDVVSWTGIIAA 343
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 259/759 (34%), Positives = 398/759 (52%), Gaps = 105/759 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+L+H ++ GL L + ++L++ Y + S+ A +F
Sbjct: 147 GRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFG------------------- 187
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+L + D V W +I ++ G + A+ +F M+Q + P T SV
Sbjct: 188 -----------HLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSV 236
Query: 152 LASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+C++ L A K H+ + +TGL V V +L+N YA+ G+
Sbjct: 237 FKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGE-------------- 282
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+D AR F +M ER+ V+W SMIA ++Q G+ A+ F ML
Sbjct: 283 -----------------IDCARKFFAEMPERNAVSWTSMIAAFTQIGH-LLAVETFHAML 324
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + P + TL + L C E L++ + + A
Sbjct: 325 LEGVV-PTRSTLFAALEGC---EDLRVARLVEA--------------------------- 353
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR--DVVAWTAMLVGY 387
IAQ+I G+ +V T L+ Y + A R+F + + D TAM+ Y
Sbjct: 354 -IAQEI----GV-VTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVY 407
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEASS 446
Q + +L+ + + G P+ L +SLA+L G+QIHA A
Sbjct: 408 AQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRD 467
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+++ NA+++MY + G++ AR F+ + R E +SW +M+ A AQHG E+ LF ML
Sbjct: 468 VTLGNAIVSMYGQCGSLRDARDAFDGMPARDE-ISWNAMLSASAQHGRVEDCCDLFRAML 526
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G + I ++ +L+AC H GLV+ G +++ M H + P H+ MVDLLGR G L
Sbjct: 527 QEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRL 586
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+A+ ++ MP+ PD W +L+ ACR++ + + G+ AAE++L + D++ AY ALCN+Y
Sbjct: 587 ADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIY 646
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
S+ G+W+DAA +RK M +G++K G S ++I++KVH F V D HPQ +AIY ++ ++
Sbjct: 647 SAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVM 706
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
I+ G+ T VLHDVEE+ KEQ+LR HSEKLAIAFG++STP+ +TLR++KNLRVC
Sbjct: 707 GAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCV 766
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+A KFI K+ REIVVRD RFHHFK G CSC DYW
Sbjct: 767 DCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 231/524 (44%), Gaps = 80/524 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++++ Y + G L+ A +VF+ + ++ V WT +I Y G AI +F ++Q+ +
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
SVL++C++ L+AG+ +H V+ GL V ++L++MY + G A A+
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F G L+ DVV WN+MI SQNG EAL
Sbjct: 186 F---------------------GHLER---------HLDVVLWNAMITANSQNGSPREAL 215
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG--KQIHAYIIRTEFDATGPVGNALI 320
+F ML+ + PD T S AC++ L+ K HA + T + V AL+
Sbjct: 216 EIFYRMLQ-LGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALV 274
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ YA+ G ++ A+K F + +R+ V+W
Sbjct: 275 NAYARCGEIDCARK---------------------------------FFAEMPERNAVSW 301
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
T+M+ + Q G + AVE F +M+ EG P TL A L L + + A A
Sbjct: 302 TSMIAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAAL---EGCEDLRVARLVEAIAQE 357
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW-----TSMIVALAQHGLG 495
G + +++ L+ Y++ A RVF+ +E W T+MI AQ
Sbjct: 358 IGVVTDVAIVTDLVMAYARCDGQEDAIRVFSA----REEGEWDAALVTAMIAVYAQCRDR 413
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+L+ +E GI PD I Y+ L AC + +G++ + + ++ + +
Sbjct: 414 RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNA 473
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
+V + G+ G L++A + + MP D ++W ++LSA H ++
Sbjct: 474 IVSMYGQCGSLRDARDAFDGMPAR-DEISWNAMLSASAQHGRVE 516
>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 685
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/690 (34%), Positives = 371/690 (53%), Gaps = 75/690 (10%)
Query: 100 EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTAL 158
++ + P R + +WT I GR + + F EM + P F + +VL C L
Sbjct: 67 KLLDETPKRSASAWTAFIAGCARSGRHMDGLSAFTEMRAKGGAEPNAFVLAAVLRCCAGL 126
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
D+ +GK +H ++++ G V + N++L+MYAK GD K F M + SWN+V+
Sbjct: 127 RDMESGKCIHGWMLRNGAHLDVVLCNAVLDMYAKCGDYECTKRAFKAMTKIDAVSWNIVI 186
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
S + +G + + FD RD +WN++I+G +NG +AL M + + + +
Sbjct: 187 SACMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRNGCAAKALDCLYRMAR-ARVVFNH 245
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+T ++ L+ L LG+Q+H ++ D
Sbjct: 246 YTYSTALALAGMLSLQDLGRQLHGRVLTAAVDT--------------------------- 278
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS---LRDRDVVAWTAMLVGYEQNGLNKD 395
+ ++L+D Y K G + A IFDS L AW+AM+ GY QNG ++
Sbjct: 279 ------DAFVRSSLMDMYCKCGSMETAVLIFDSWSQLTGDMNFAWSAMVAGYVQNGREEE 332
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
A E FRSM+REG + +TL++ ++ ++ ++ G+
Sbjct: 333 AFEFFRSMLREGVAAHQFTLTSAIAACANAGMVEQGR----------------------- 369
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
++ +A N A WTSM+ + A HG G AI+LF RM I P+ I
Sbjct: 370 IFDRACAKNVAL--------------WTSMLCSYASHGKGRMAIELFNRMTAEKITPNEI 415
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T VGVL+AC+HG LV +G ++ +M++ + I P+ H+ MVDL GRAG+L +A+NFI+
Sbjct: 416 TLVGVLSACSHGRLVNEGDHFFKLMQDEYGIVPSIEHYNCMVDLYGRAGMLYKAHNFIKE 475
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
++ + + W +LLSACR+HK+++ K+A+E L+ +E ++G+Y L N+Y++ KW D
Sbjct: 476 NNIKHEAIVWKTLLSACRLHKHMEYAKLASENLIQLEECDAGSYVMLSNVYATHSKWLDT 535
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+ +R SM+ V K G SW+ ++N +H F D HP+ IY + K+ + +K++G+
Sbjct: 536 SKLRSSMRERRVWKQPGRSWIHLKNIMHTFVAGDTAHPRSAEIYAYLEKLMERLKDLGYT 595
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
T V HDVEE+ +E L+ HSEKLAIAFG+ISTP T LRI KNLRVC DCH AIK++
Sbjct: 596 SRTDLVAHDVEEEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCVDCHEAIKYV 655
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ DREIVVRD RFHHFK CSC D+W
Sbjct: 656 SQATDREIVVRDLYRFHHFKDAKCSCEDFW 685
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 36/295 (12%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN L + L A L R+ GK +H +++ G HL V L N++++ YAK
Sbjct: 111 PNAFVLAAVLRCCAGL-------RDMESGKCIHGWMLRNGAHLDVVLCNAVLDMYAKCGD 163
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
K+ F M SWN ++SA + G + + ++F++ P RD+ SW T+I
Sbjct: 164 YECTKRAFKAMTKIDAVSWNIVISACMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRN 223
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G A+ M + +V+ +T ++ LA L G+++H V+ + V
Sbjct: 224 GCAAKALDCLYRMARARVVFNHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVDTDAFVR 283
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
+SL++MY K G A +FD SW+ + +G ++ A
Sbjct: 284 SSLMDMYCKCGSMETAVLIFD--------SWSQL------TGDMNFA------------- 316
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
W++M+AGY QNG + EA F +ML++ + +FTL S ++ACAN ++ G+
Sbjct: 317 -WSAMVAGYVQNGREEEAFEFFRSMLRE-GVAAHQFTLTSAIAACANAGMVEQGR 369
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/593 (39%), Positives = 345/593 (58%), Gaps = 41/593 (6%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
R FD++ +++VV +N MI Y N +AL +F NM + PD +T L A +
Sbjct: 1079 TRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM-AGHGIDPDHYTYPCVLKASS 1137
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
E L +G QIHA ++R D VGN LIS Y K G + A ++++Z + +V+++
Sbjct: 1138 GSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZ--MPCRDVVSW 1195
Query: 350 TTLLDGYIKIG-------------------DIG------PA------------RRIFDSL 372
+L+ G + G D G PA + +F L
Sbjct: 1196 NSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKL 1255
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
++ +V+W M+ Y N + +AV++F M P+ +++++L L++L G+
Sbjct: 1256 ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 1315
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH +R +L + NALI MY+K G + AR VF+ + +R + VSWTSMI A +
Sbjct: 1316 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-DVVSWTSMISAYGMN 1374
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G G +A+ LF RM +LG+ PD I +V VL+AC+H GL+++G+ Y+ +M KI P H
Sbjct: 1375 GKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEH 1434
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
F MVDLLGRAG + EAY FI+ MP+EP+ WG+LLSACRV+ N+ +G +AA++L +
Sbjct: 1435 FVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLC 1494
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P+ SG Y L N+Y+ G+WED +R MK G+KK G S ++ N+VH F D H
Sbjct: 1495 PEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSH 1554
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQ IY ++ + ++KE G+VP+T S LHDVEE+ KE L HSEKLAIAF +++T
Sbjct: 1555 PQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAP 1614
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +RI KNLRVC DCH A K I K+V REI +RD RFHHF G+CSC DYW
Sbjct: 1615 GSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 201/467 (43%), Gaps = 79/467 (16%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
+LI P++ + S +K V + + + V +N K I Y
Sbjct: 987 NLIDPVDLISASPPSAVKQLQTLVLSIQKPKFTQ---QXVVLTENLCGQILDKNPDIKYL 1043
Query: 68 KKVFDEMPVKTLCSWNT-----ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
KK+ ++ + N ++ AYA G +F+ +P ++ V + +I +Y
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 1103
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
+ +A+ +F M + P +T VL + + DL G ++H+ VV+ GL V V
Sbjct: 1104 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 1163
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA------------ 230
N L++MY K G + A V D M ++V SWN +V+ +G+ D A
Sbjct: 1164 GNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGL 1223
Query: 231 -------------------------RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
+ F ++ + +V+WN MIA Y N EA+ +F
Sbjct: 1224 KPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF 1283
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
M +D ++ PD ++AS L AC +L L LG++IH Y++R + NALI YAK
Sbjct: 1284 LQM-EDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAK 1342
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A+++ +Q ++ RDVV+WT+M+
Sbjct: 1343 CGCLEYAREVFDQ---------------------------------MKFRDVVSWTSMIS 1369
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
Y NG +DAV LF M G P++ ++LS S LD G+
Sbjct: 1370 AYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 1416
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/545 (40%), Positives = 334/545 (61%), Gaps = 4/545 (0%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+ WNS + ++ +A+ +F L+ + PD FT +S L AC NL L G+ +
Sbjct: 92 ETFVWNSCLKALAEGDSPIDAIMLFYR-LRQYDVCPDTFTCSSVLRACLNLLDLSNGRIL 150
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H + + F + + N ++ YA G + A+ + E+ + +V+ + ++ IK G
Sbjct: 151 HGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEK--MPQRDVVTWNIMIAQLIKQG 208
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D A +F + +R+V +WT+M+ GY Q G K+A+ LF M G K N T+ A+L+
Sbjct: 209 DHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLA 268
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L +LD G +IH + R G ++ +SN LI MY K G + A +VF + R V
Sbjct: 269 ACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT-VV 327
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SW++MI LA HG EEA++LF M ++GI+P+ +T++G+L AC+H GL+ +G+R++ M
Sbjct: 328 SWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASM 387
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ I P H+ MVDLL RAGLL EA+ FI NMP++P+ V WG+LL ACRVHKN+++
Sbjct: 388 TRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEM 447
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
+ A + LL ++P N G Y L N+Y+ G+WED A +RK MK VKKT G+S + +
Sbjct: 448 AEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDG 507
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
VH F + HP + I+ + ++ +E++ G+VP+T+ VL D+EE K + + HSEK
Sbjct: 508 VVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEK 567
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+ FGL++TP T +RIMKNLR+C DCHSA K I +V+REIVVRD RFH F CS
Sbjct: 568 LALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCS 627
Query: 781 CRDYW 785
CRDYW
Sbjct: 628 CRDYW 632
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 255/571 (44%), Gaps = 76/571 (13%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFD--EMPVKTLCSWNTI 85
+PF + VHA+IIK LS+ + A T S YA+++F E WN+
Sbjct: 40 SPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSC 99
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
L A A+ DS +AI +F + Q V P
Sbjct: 100 LKALAEG----------------DSPI---------------DAIMLFYRLRQYDVCPDT 128
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT +SVL +C L DLS G+ +H V K G + + N ++++YA G+ A+ +F+
Sbjct: 129 FTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEK 188
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M ++V +WN++++ I G + A F +M ER+V +W SMIAGY Q G EA+ +F
Sbjct: 189 MPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLF 248
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
A M +++ +K ++ T+ + L+ACA+L L LG +IH Y R F + N LI Y K
Sbjct: 249 AKM-EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVK 307
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A K +F+ + +R VV+W+AM+
Sbjct: 308 CGCLEEACK---------------------------------VFEEMEERTVVSWSAMIG 334
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEA 444
G +G ++A+ LF M + G +PN T +L S + + G++ AS R G
Sbjct: 335 GLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGII 394
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ ++ + S+AG ++ A + + V W +++ A H E A + +
Sbjct: 395 PQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKH 454
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
+LEL D YV + G E R MK+ ++K TP + VD G
Sbjct: 455 LLELDPLNDGY-YVVLSNIYAEAGRWEDTARVRKFMKD-RQVKKTPGWSSITVD-----G 507
Query: 565 LLQEAYNFIENMPLEPDVVA-WGSLLSACRV 594
++ E E+ P + W LL R+
Sbjct: 508 VVHEFVAGEESHPDTEQIFQRWEELLEEMRL 538
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH-WRQETVSWTSMIVALA 490
+Q+HA +++ S+ + + + + + A+++F + + ET W S + ALA
Sbjct: 45 RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 104
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
+ +AI LF R+ + + PD T VL AC + + G+ + +++ V +
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKV-GFRSNL 163
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
+V L G + EA E MP + DVV W +++ + + A L
Sbjct: 164 YLQNMIVHLYASCGEMGEARLLFEKMP-QRDVVTWNIMIAQLIKQGDHE----GAYDLFS 218
Query: 611 IEPD-NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
P+ N +++++ Y CGK ++A ++ M+ GVK
Sbjct: 219 RMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVK 257
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/573 (39%), Positives = 344/573 (60%), Gaps = 36/573 (6%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N +VS++ G LD ARA F+ ++ER VV+W++MI Y+ +G EAL +F M D +
Sbjct: 24 NGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRV 83
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPV-GNALISCYAKVGGVEIA 332
+P+ T +AC +E L+ G++IHA + + E ++ + NAL++ Y + G +E
Sbjct: 84 EPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLE-- 141
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
AR++FD++ D +WT+M+ +N
Sbjct: 142 -------------------------------EARKVFDTMDHPDAFSWTSMITACTENCE 170
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+A+ELF M EG P + TL+++L+ + +L GKQIH+ SG SS+ A
Sbjct: 171 LLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTA 230
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+ MY+K G++ + +VF + R +VSWT+MI ALAQHG G+EA++LF+ M G+
Sbjct: 231 LLDMYAKCGSLECSSKVFTAMETRN-SVSWTAMIAALAQHGQGDEALELFKEMNLEGMVA 289
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D T++ VL AC+H GL+++ +++ M + I PT +H+ +D +GRAG LQ+A
Sbjct: 290 DATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEEL 349
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I +MP P+ + W +LL+ACR+H + AE L + P++S AY+ L N+Y++ G++
Sbjct: 350 IHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRY 409
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
D +RK M G+KK G S+++++NKVH F D HP RD I ++ K+ ++E
Sbjct: 410 GDQMRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREA 469
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+VP+T VLH V E+ KEQ++ HSEKLAIAFGLI+TP T L I+KNLRVC+DCH+A
Sbjct: 470 GYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAAT 529
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K++ R IVVRD RFHHF+ G CSC+DYW
Sbjct: 530 KVIAKIMRRRIVVRDTHRFHHFEDGQCSCKDYW 562
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 205/492 (41%), Gaps = 103/492 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+R+ CG H + +N L +S YAK
Sbjct: 4 GRRIHSRLSLCGFHRATIAQNGL-------------------------------VSMYAK 32
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTS 150
G LD A +FN + R VSW+ +I Y GR + A+ +F M D +V P T T
Sbjct: 33 CGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTG 92
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VTNSLLNMYAKVGDEMMAKAVFDGMRL 208
V +C + DL G+++H+ + +G N + N+LLNMY + G
Sbjct: 93 VFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGS------------- 139
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
L+ AR FD M D +W SMI ++N EAL +F M
Sbjct: 140 ------------------LEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRM 181
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ P TLAS L+ACA LK+GKQIH+ + + F ++ AL+ YAK G
Sbjct: 182 -NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGS 240
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+E + K +F ++ R+ V+WTAM+
Sbjct: 241 LECSSK---------------------------------VFTAMETRNSVSWTAMIAALA 267
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASS 446
Q+G +A+ELF+ M EG + T +L S + + S + + +
Sbjct: 268 QHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTE 327
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
AL T+ +AG + A + + + + ET++W +++ A H E A ++ E +
Sbjct: 328 THYCRALDTI-GRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLS 386
Query: 507 ELGIKPDHITYV 518
+L + D + Y
Sbjct: 387 KLAPE-DSMAYT 397
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 138/257 (53%), Gaps = 6/257 (2%)
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
IA L+ Y K G + AR IF+ + +R VV+W+AM+ Y +G ++A+ LF M
Sbjct: 20 TIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRN 79
Query: 406 EGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE--ASSLSVSNALITMYSKAGN 462
+G +PN T + + + + L+ G++IHA A+ SGE +S+ + NAL+ MY + G+
Sbjct: 80 DGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGS 139
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ AR+VF+ + + SWTSMI A ++ EA++LF RM GI P +T VL
Sbjct: 140 LEEARKVFDTMD-HPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLN 198
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
AC G ++ G++ ++ + + + +++D+ + G L+ + M +
Sbjct: 199 ACACSGALKVGKQIHSRL-DASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETR-NS 256
Query: 583 VAWGSLLSACRVHKNLD 599
V+W ++++A H D
Sbjct: 257 VSWTAMIAALAQHGQGD 273
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 136/298 (45%), Gaps = 8/298 (2%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +L+ Y + G L+ A +VF+ M + D+ SWT++I E A+ +F M + +
Sbjct: 128 NALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIP 187
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT T+ SVL +C G L GK++HS + +G V +LL+MYAK G + V
Sbjct: 188 PTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKV 247
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYD 258
F M +N SW +++ G+ D A F +M + D T+ ++ S G
Sbjct: 248 FTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLI 307
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E+L F +M++D ++ P + L +L+ +++ I F
Sbjct: 308 KESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEEL---IHSMPFHPETLTWKT 364
Query: 319 LISCYAKVGGVEIAQKIVE-QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
L++ E A K+ E S ++ + +A+T L + Y G G R+ + DR
Sbjct: 365 LLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDR 422
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
++ G++IH+ G + N L++MY+K G ++ AR +FN I R VSW++MI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERT-VVSWSAMIG 59
Query: 488 ALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A A HG G+EA+ LF RM G ++P+ +T+ GV AC +EQG+ + + ++
Sbjct: 60 AYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGEL 119
Query: 547 KPTPSHFA-SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
K + + +++++ R G L+EA + M PD +W S+++AC
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
PP+ ++ A +L + S VGK +H+R+ G H SV + +L++ YAK S+
Sbjct: 187 PPTSVT----LASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLE 242
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYN 121
+ KVF M + SW +++A A+ G+ D A E+F M D+ ++ ++ +
Sbjct: 243 CSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACS 302
Query: 122 EIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLS-AGKKVHSF 170
G K ++ F MV+D + PT+ L + G L A + +HS
Sbjct: 303 HAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSM 353
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/680 (37%), Positives = 380/680 (55%), Gaps = 71/680 (10%)
Query: 142 LPTQFTVTS----VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+P +F V + +L +C L+ KK+H +K + +V + L +Y
Sbjct: 1 MPLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYL------ 54
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
S N VV LAR FD++ V+ WN +I Y+ NG
Sbjct: 55 ---------------SCNQVV----------LARRLFDEIPNPSVILWNQIIRAYAWNGP 89
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
A+ ++ +ML ++P+K+T L AC+ L ++ G +IH++ ++ V
Sbjct: 90 FDGAIDLYHSMLH-LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG---------------DI 362
AL+ YAK G + AQ++ S +S+ +V+A+ ++ G G I
Sbjct: 149 ALVDFYAKCGILVEAQRLF--SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206
Query: 363 GP-----------------ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
P AR+IFD + R+ V+W+AM+ GY + K+A+++FR M
Sbjct: 207 CPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQL 266
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G P+ T+ +L S LA+L HG H + G A+ + NALI MYSK G I+
Sbjct: 267 SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISF 326
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
AR VFN + R + VSW +MI+ HGLG EA+ LF +L LG+KPD IT++ +L++C+
Sbjct: 327 AREVFNRMD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 385
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
H GLV +G+ +++ M I P H MVD+LGRAGL+ EA++FI NMP EPDV W
Sbjct: 386 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 445
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYV 645
+LLSACR+HKN++LG+ ++K+ + P+++G + L N+YS+ G+W+DAA+IR + K
Sbjct: 446 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 505
Query: 646 GVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDV 705
G+KK G SW++I VH F D H Q I K+ ++ E+K +G+ + + V DV
Sbjct: 506 GLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDV 565
Query: 706 EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
EE+ KEQ+L +HSEKLAIAFG+++ + + KNLRVC DCH+AIKF+ + REI V
Sbjct: 566 EEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITV 625
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RDA RFHHFK G C+C D+W
Sbjct: 626 RDANRFHHFKNGTCNCGDFW 645
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 215/527 (40%), Gaps = 106/527 (20%)
Query: 12 PLEF-----YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
PL F Y HLL++ ++S++ K +H +K + + + L Y +
Sbjct: 2 PLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVL 61
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
A+++FDE+P N + W II Y G F
Sbjct: 62 ARRLFDEIP-------------------------------NPSVILWNQIIRAYAWNGPF 90
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
AI ++ M+ V P ++T VL +C+ L + G ++HS GL V V +L
Sbjct: 91 DGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTAL 150
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD------------------ 228
++ YAK G + A+ +F M ++V +WN +++ G D
Sbjct: 151 VDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNS 210
Query: 229 --------------LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
AR FD M R+ V+W++MI GY + EAL +F M++ S +
Sbjct: 211 STIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIF-RMMQLSGI 269
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
PD T+ L AC++L L+ G H Y+I F + NALI Y+K G +
Sbjct: 270 DPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISF--- 326
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
AR +F+ + D+V+W AM++GY +GL
Sbjct: 327 ------------------------------AREVFNRMDRHDIVSWNAMIIGYGIHGLGM 356
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNAL 453
+A+ LF ++ G KP++ T +LS S + G+ + R + +
Sbjct: 357 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 416
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE 497
+ + +AG I+ A + + + W++++ A H LGEE
Sbjct: 417 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEE 463
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 265/694 (38%), Positives = 381/694 (54%), Gaps = 87/694 (12%)
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
SVSW +I+ Y+ +A+ +F EM V +LP V ++L LG
Sbjct: 23 SVSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGFF------- 75
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
V N+L++MYAK G A VF+ MR K+V +WN +V+ + +GR +
Sbjct: 76 -------------VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFE 122
Query: 229 LARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
A + F +M IE DVVTW+S+I+GY+Q G+ EA+ +F M +P+ TL S
Sbjct: 123 DALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCG-CRCRPNVVTLMSL 181
Query: 285 LSACANLEKLKLGKQIHAY----IIRTEF-DATGPVG--NALISCYAKVGGVEIAQKIVE 337
LSACA++ L GK+ H Y I++ E D T + NALI YAK +E+A
Sbjct: 182 LSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA----- 236
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAMLVGYEQNGLNKD 395
R +FD + +DRDVV WT M+ GY Q+G
Sbjct: 237 ----------------------------RAMFDEICPKDRDVVTWTVMIGGYAQHGDANH 268
Query: 396 AVELFRSMVR--EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS--LSVSN 451
A++LF M + PN++T+S +L + LA+L GKQIHA LR S L V+N
Sbjct: 269 ALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVAN 328
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI MYSK+G+++ A+ VF+ + ++ VSWTS++ HG A+ L
Sbjct: 329 CLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHG---AALVL---------- 374
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
D IT++ VL AC+H G+V++G + M + P H+A M DL GRAG L EA
Sbjct: 375 -DGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATR 433
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I +M +EP V W +LLSACR H N +L + AA+KLL ++ DN G Y+ L N+Y++ +
Sbjct: 434 LINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARR 493
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+D A IR MK G+KK G+SWV+ + + F V D H Q IY +A + IK
Sbjct: 494 WKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKA 553
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+VP T LHDV+++ K L HSEKLA+A+ +++ P +RI KNLR+C D HSA
Sbjct: 554 IGYVPQTNFSLHDVDDEEKGDQLLEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSA 613
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I +I +V+ EI++RD++RFH FK G CSC+ YW
Sbjct: 614 ITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 647
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 89/482 (18%)
Query: 46 LSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM 105
L F+ N+L++ YAK + A KVF+ M K + +WN +++ Y++ GR + A +F M
Sbjct: 72 LGFFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM 131
Query: 106 PNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL 161
D V+W+++I Y + G A+ +F +M + P T+ S+L++C ++G L
Sbjct: 132 REEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGAL 191
Query: 162 SAGKKVHSFVVKTGLSGCVN-------VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
GK+ H + VK L G N V N+L++MYAK +A+A+FD + K
Sbjct: 192 LHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPK----- 246
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK-DSS 273
+RDVVTW MI GY+Q+G AL +F+ M K D+
Sbjct: 247 ------------------------DRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNC 282
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYII-RTEFDATGP-VGNALISCYAKVGGVEI 331
+ P+ FT++ L ACA L LK GKQIHAY++ R+ D+ V N LI Y+K G V+
Sbjct: 283 IVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDT 342
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AQ + + +S N +++T+LL GY G G A + D + + +L +G
Sbjct: 343 AQVVFDS--MSKRNAVSWTSLLTGY---GMHGAALVL-------DGITFLVVLYACSHSG 390
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ ++LF M ++ +D G + +A
Sbjct: 391 MVDRGIDLFYRMSKD-------------------FVVDPGVEHYA--------------- 416
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+ ++ +AG + A R+ N + V W +++ A H E A +++LEL
Sbjct: 417 CMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKAD 476
Query: 512 PD 513
D
Sbjct: 477 ND 478
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 32 GKLVHARIIKCGLHLS--VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
GK +HA +++ S +F+ N L++ Y+K+ + A+ VFD M + SW ++L+ Y
Sbjct: 306 GKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY 365
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
G A V D +++ ++ + G I +F M +D V+
Sbjct: 366 GMHG----AALVL------DGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVV 408
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/624 (37%), Positives = 361/624 (57%), Gaps = 37/624 (5%)
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
KK+H+ +VK+GL+ C + N+LL+ Y K
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCN----------------------------- 51
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
L A FD+M +RD V+W S++ Y+Q + L +F M L+PD F A+
Sbjct: 52 --LLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYAT 109
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L ACA+L L+LGKQ+HA + + F V ++L+ YAK G IA+ + + I
Sbjct: 110 LLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFD--SILV 167
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+++T +L GY + G A +F R++ +WTA++ G Q+G D +F M
Sbjct: 168 KTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEM 227
Query: 404 VREGPK-PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
REG + LS+++ ++LA L GKQIH + SG S L +SNAL+ MY+K +
Sbjct: 228 RREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSD 287
Query: 463 INAARRVFN-LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
I AAR VFN ++H ++ VSWTS+IV AQHG +EA+ L+++M+ IKP+ +T+VG++
Sbjct: 288 ILAARNVFNRMLH--RDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLI 345
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC+H GLV +G++ + M ++I P+ F +DLL R+G L EA + I+ MP +PD
Sbjct: 346 YACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPD 405
Query: 582 VVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
W +LLSAC+ H N ++G A++LL + Y L N+Y+ GKWE + +RK
Sbjct: 406 EPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKL 465
Query: 642 MKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
M + VK+ G+S + + + VF + HP +D I+ + ++ E+++ G++PDT+ V
Sbjct: 466 MTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYV 525
Query: 702 LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDR 761
LHD+EE KE+ L HSE+ A+A+GL+ T +RI+KNLR+C DCH+ +K +V +
Sbjct: 526 LHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHK 585
Query: 762 EIVVRDATRFHHFKKGLCSCRDYW 785
EI+VRDATR+HHFK G CSC D+W
Sbjct: 586 EIIVRDATRYHHFKDGRCSCNDFW 609
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 258/546 (47%), Gaps = 70/546 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y H L+ K + P K +HA+I+K GL+ +P
Sbjct: 5 YLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQC------------------------QPLP 40
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
NT+L AY K L A +F+ MP RD VSW +I+ YN+ + +F
Sbjct: 41 -------NTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHY 93
Query: 136 M-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M D++ P F ++L +C +L L GK+VH+ V + V +SL++MYAK G
Sbjct: 94 MFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCG 153
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+A++VFD + +K SW ++S + SG D A F + R++ +W ++I+G Q
Sbjct: 154 LPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQ 213
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+GY + MF M ++ D L+S + ACANL L LGKQIH +I + +++
Sbjct: 214 SGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLF 273
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ NAL+ YAK DI AR +F+ +
Sbjct: 274 ISNALVDMYAKC---------------------------------SDILAARNVFNRMLH 300
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RDVV+WT+++VG Q+G K+A++L+ MV KPN T ++ S + G+++
Sbjct: 301 RDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKL 360
Query: 435 HASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ + S SL + + + S++G++N A + + + + +W +++ A HG
Sbjct: 361 FKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHG 420
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
E +++ +R+L L + + TYV + G EQ R +M ++ ++K P +
Sbjct: 421 NTEMGVRIADRLLSLNMH-EPSTYVLLSNVYAGAGKWEQMSRVRKLMTDM-EVKRKPGY- 477
Query: 554 ASMVDL 559
S +DL
Sbjct: 478 -SSIDL 482
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/703 (35%), Positives = 388/703 (55%), Gaps = 70/703 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AY+ + A VFN + +D+V WT ++ Y+E +NA R+F +M P
Sbjct: 203 LIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPN 262
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
F +TSVL + L + GK +H +KT +V +LL+MYAK GD
Sbjct: 263 PFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD--------- 313
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+K+ AR F+ + DV+ + MI+ Y+Q+ + +A +
Sbjct: 314 ---IKD-------------------ARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFEL 351
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F +++ SS+ P++++L+S L AC N+ +L GKQIH + I+ ++ VGNAL
Sbjct: 352 FLRLMR-SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL----- 405
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+D Y K D+ + +IF SLRD + V+W ++
Sbjct: 406 ----------------------------MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
VG+ Q+GL ++A+ +F M T S++L +S AS+ H QIH S +S
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ + N+LI Y+K G I A +VF + R + +SW ++I A HG +A++LF+R
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMER-DIISWNAIISGYALHGQAADALELFDR 556
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + ++ + IT+V +L+ C+ GLV G ++ M+ H IKP+ H+ +V LLGRAG
Sbjct: 557 MNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAG 616
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L +A FI ++P P + W +LLS+C +HKN+ LG+ +AEK+L IEP + Y L N
Sbjct: 617 RLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSN 676
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y++ G + A +RKSM+ +GV+K G SWV+I+ ++H F V HP I N M +
Sbjct: 677 MYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVI-NAMLE 735
Query: 685 IWDEIK--EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
W +K G++PD VLHDV+++ K +ML HSE+LA+A+GL+ TP +RI+KNL
Sbjct: 736 -WLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNL 794
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R C DCH+A I K+V REI+VRD RFHHF+ G CSC DYW
Sbjct: 795 RSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 164/637 (25%), Positives = 281/637 (44%), Gaps = 116/637 (18%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGL--HLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
A LQ + + G+ VH +++ G L +F N L+N Y K ++ A+++FD M
Sbjct: 63 ARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRM 122
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + S+ T++ A+A++G + A +F + W +E+
Sbjct: 123 PERNMVSFVTLVQAHAQRGDFEAAAALFR------RLRWEG-----HEV----------- 160
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
QF +T++L A+ VHS K G V + L++ Y+
Sbjct: 161 ---------NQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCS 211
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ VF+G ++ +D V W +M++ YS+
Sbjct: 212 LVSDAEHVFNG-------------------------------IVRKDAVVWTAMVSCYSE 240
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
N A +F+ M + S KP+ F L S L A L + LGK IH I+T D
Sbjct: 241 NDCPENAFRVFSKM-RVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
VG AL+ YAK G DI AR F+ +
Sbjct: 300 VGGALLDMYAKCG---------------------------------DIKDARLAFEMIPY 326
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
DV+ + M+ Y Q+ N+ A ELF ++R PN Y+LS++L +++ LD GKQI
Sbjct: 327 DDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQI 386
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H A++ G S L V NAL+ Y+K +++++ ++F+ + E VSW +++V +Q GL
Sbjct: 387 HNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE-VSWNTIVVGFSQSGL 445
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ-GQRYYNMMKNVHKIKPTPSHF 553
GEEA+ +F M + +TY VL AC + GQ + ++ K+ +
Sbjct: 446 GEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN- 504
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE- 612
S++D + G +++A +++ +E D+++W +++S +H AA+ L L +
Sbjct: 505 -SLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHGQ------AADALELFDR 556
Query: 613 ------PDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
N + AL ++ SS G ++ SM+
Sbjct: 557 MNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMR 593
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 78/420 (18%)
Query: 135 EMVQDQVLPT-----QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV--TNSLL 187
E+ +LP+ F L C A GD G+ VH VV+ G G +++ N LL
Sbjct: 44 ELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLL 103
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
NMY K+G L AR FD+M ER++V++ +
Sbjct: 104 NMYGKLGP-------------------------------LASARRLFDRMPERNMVSFVT 132
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
++ ++Q G DFEA L+ + ++F L + L ++ L +H+ +
Sbjct: 133 LVQAHAQRG-DFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKL 191
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
D VG+ LI D Y + A
Sbjct: 192 GHDHNAFVGSGLI---------------------------------DAYSLCSLVSDAEH 218
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F+ + +D V WTAM+ Y +N ++A +F M G KPN + L+++L + L S
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ GK IH A+++ + V AL+ MY+K G+I AR F +I + + + + MI
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPY-DDVILLSFMIS 337
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQ E+A +LF R++ + P+ + VL ACT+ ++ G++ +N H IK
Sbjct: 338 RYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHN-----HAIK 392
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 42/277 (15%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN SL S L+ +++Q + GK +H IK G +F+ N+LM+FYAK
Sbjct: 362 PNEYSLSSVLQACTNMVQLDF-------GKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+D + ++F+ + + + VSW TI+V +++
Sbjct: 415 -------------------------------MDSSLKIFSSLRDANEVSWNTIVVGFSQS 443
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G + A+ +F EM Q+ TQ T +SVL +C + + ++H + K+ + +
Sbjct: 444 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIG 503
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IE 239
NSL++ YAK G A VF + +++ SWN ++S + G+ A FD+M +E
Sbjct: 504 NSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVE 563
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+ +T+ ++++ S G L +F +M D +KP
Sbjct: 564 SNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKP 600
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/655 (36%), Positives = 366/655 (55%), Gaps = 44/655 (6%)
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVG--DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
F LS ++ N +L+ Y + ++ K + D N S ++ ++ G
Sbjct: 11 FATARQLSFTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEP 70
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
LAR FD++ +++VV +N MI Y N +AL ++ M PD +T L A
Sbjct: 71 GLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYT-QGFVPDMYTYPCVLKA 129
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
+ + L +G QIH +++ D VGN LI+ Y K ++ AQ+++++ I +V+
Sbjct: 130 SSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDE--IPCRDVV 187
Query: 348 AFTTLLDGYIKIGDIGPA-------------------------------------RRIFD 370
++ +++ Y + G A + +F
Sbjct: 188 SWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFL 247
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
L + V++W M+ Y N + K+AV L+ M G +P+ ++ ++L L++L
Sbjct: 248 KLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSL 307
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
G+++H A R +L + NALI MY+K G + AR VFN + +R + VSWTS+I A
Sbjct: 308 GRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR-DVVSWTSIISAYG 366
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
+ G G +A+ +F M G+ PD I +V VL AC+H GL++ G+ Y+N+M I P
Sbjct: 367 KCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GITPKL 425
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
HFA +VDLLGRAG + EAY FI MPLEPD WG LLSACRV+ N+++G +AA+KLL+
Sbjct: 426 EHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLM 485
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+ P++SG Y L N+Y+ G+W D A IR M+ G+KK G S V++ + VH F D
Sbjct: 486 LNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDH 545
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HPQ IY ++ + ++KE+G++P+T S LHDVEE+ KE L HSEKLA+AF +I+T
Sbjct: 546 SHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINT 605
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T +R+ KNLRVC DCH A K I K+ +REI++RD RFHHF++G CSC DYW
Sbjct: 606 KPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/529 (22%), Positives = 220/529 (41%), Gaps = 95/529 (17%)
Query: 53 SLMNFYAKTESISYAK----KVFDEMP-VKTL------------CSWNT-----ILSAYA 90
SL ++A +S+ + ++ D+ P + TL WN ++ YA
Sbjct: 6 SLSRYFATARQLSFTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYA 65
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G LA +F+ + +++ V + +I +Y +K+A+ ++ M +P +T
Sbjct: 66 ACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPC 125
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + + L G ++H V+K GL + V N L+ MY K A+ V D + ++
Sbjct: 126 VLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRD 185
Query: 211 VSSWNVVVSLHIHSGR----LDLAR---------------------------------AQ 233
V SWN +VS++ +GR L+L R
Sbjct: 186 VVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEM 245
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
F ++ ++ V++WN MIA Y N EA+ +++ M + + ++PD ++ S L A +L
Sbjct: 246 FLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQM-EANGVEPDVVSIVSVLPAYGDLSA 304
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L LG+++H + R + + NALI YAK G + A+ + Q + + +V+++T+++
Sbjct: 305 LSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQ--MQFRDVVSWTSII 362
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
Y K G +DAV +F M G P++
Sbjct: 363 SAYGKCGQ-------------------------------GRDAVAVFAEMRNSGLNPDSI 391
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
++L+ S LD G+ G L ++ + +AG I+ A +
Sbjct: 392 AFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQM 451
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ W ++ A + I +++L L P+H Y +L+
Sbjct: 452 PLEPDERVWGPLLSACRVYSNMNIGILAADKLLML--NPEHSGYYVLLS 498
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 69/320 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L+++ +S + +VG +H ++K GL L++++ N L+ Y K +S+ A++V DE+P
Sbjct: 123 YPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIP 182
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEV------FNLMPN---------------------- 107
+ + SWN+++S YA+ GR + A E+ NL PN
Sbjct: 183 CRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYV 242
Query: 108 ---------RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
+ +SW +I Y K A+ ++ +M + V P ++ SVL + L
Sbjct: 243 KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDL 302
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
LS G++VH F + L + + N+L++MYAK G A+AVF+ M+ ++V SW
Sbjct: 303 SALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSW---- 358
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
S+I+ Y + G +A+ +FA M ++S L PD
Sbjct: 359 ---------------------------TSIISAYGKCGQGRDAVAVFAEM-RNSGLNPDS 390
Query: 279 FTLASTLSACANLEKLKLGK 298
S L+AC++ L G+
Sbjct: 391 IAFVSVLAACSHAGLLDDGR 410
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/691 (35%), Positives = 388/691 (56%), Gaps = 50/691 (7%)
Query: 14 EFYAHLLQSN-----LKSRNPFVG-KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
E AHL S+ L+S G + H ++K + FL N+L++ YA+ + A
Sbjct: 12 ELVAHLRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREA 71
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR-- 125
++VFD +P++ S+N +LSAYA+ GR D A +F +P+ D S+ ++ GR
Sbjct: 72 RRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGH 131
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
+A+R M D + ++ S L++C A DL G++VH V ++ + V++ +
Sbjct: 132 AGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTA 191
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYAK + A+ VFD M ER+VV+W
Sbjct: 192 LVDMYAKCERPVDARRVFDA-------------------------------MPERNVVSW 220
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
NS+I Y QNG EAL +F M+ + PD+ TL+S +SACA L + G+Q+HA+++
Sbjct: 221 NSLITCYEQNGPVGEALVLFVEMMA-TGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMV 279
Query: 306 -RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
R + NAL+ YAK G A+ I + + +V++ T++L GY K ++
Sbjct: 280 KRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDS--MPSRSVVSETSILAGYAKSANVED 337
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
A+ +F + +++V+AW ++ Y QNG ++A+ LF + R+ P +YT +L+ +
Sbjct: 338 AQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 397
Query: 425 LASLDHGKQIHASALRSG------EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
+A L G+Q H L+ G S + V N+L+ MY K G+I+ +VF + R +
Sbjct: 398 IAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-D 456
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSW +MIV AQ+G ++A+ LFERML PD +T +GVL+AC H GLV++G+R+++
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFH 516
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M H I P+ H+ MVDLLGRAG L+EA I++MP EPD V W SLL ACR+HKN+
Sbjct: 517 FMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNV 576
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+LG+ A +L ++P+NSG Y L N+Y+ GKW D +R+SMK GV K G SW++I
Sbjct: 577 ELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEI 636
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
+K++VF D HP R+ I++ + I E+
Sbjct: 637 GSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/712 (34%), Positives = 388/712 (54%), Gaps = 83/712 (11%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S Y+K G + A VF++ RD VSW +++ Y G + +R+F M + +
Sbjct: 148 NSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMG 207
Query: 143 PTQFTVTSVLASCTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
F + SV+ C+ GD + + VH V+K GL V + +++++MYAK G + A
Sbjct: 208 LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAA 267
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN----G 256
A+F ++ E +VV +N+MIAG+ + G
Sbjct: 268 ALFRSVQ-------------------------------EPNVVMFNTMIAGFCRTETVIG 296
Query: 257 YDF--EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+ EAL +++ ++ ++P +FT +S L AC L+ GKQIH +I+ F
Sbjct: 297 KEVASEALTLYSE-VQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF 355
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+G+ALI Y G +E DG+ R F S
Sbjct: 356 IGSALIDLYFNSGCME-----------------------DGF----------RCFRSSPK 382
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D+V WTAM+ G QN L++ A+ LF + G KP+ +T+S++++ +SLA G+QI
Sbjct: 383 HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
A +SG + N+ + MY+++G+++AA R F + + VSW+++I AQHG
Sbjct: 443 QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME-SHDVVSWSAVISCHAQHGC 501
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
+A+ F+ M++ + P+ IT++GVLTAC+HGGLV++G RYY M + + PT H
Sbjct: 502 ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCT 561
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGRAG L +A FI N D V W SLL++CR+H++L+ G++ A +++ +EP
Sbjct: 562 CVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT 621
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+S +Y L N+Y G+ A+ R MK GVKK G SW++++ VH F D HP+
Sbjct: 622 SSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPE 681
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ-MLRHHSEKLAIAFGLISTPEN 733
AIY K+ ++ I+++ D E +EQ ++ HSEKLA+A G+I P++
Sbjct: 682 SSAIYTKLEEMLSRIEKLATT--------DTEISKREQNLMNCHSEKLAVALGMIHLPQS 733
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+MKNLRVC DCHS +K I K +REI++RD RFHHF+ G CSC DYW
Sbjct: 734 APIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/702 (34%), Positives = 395/702 (56%), Gaps = 37/702 (5%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+D +FN + N + W +I Y + A ++ M+ + + +T ++ +
Sbjct: 28 IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C+ K+VH+ V+K G V V N+L+N ++ + A VF+ + + SW
Sbjct: 88 CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147
Query: 215 NVVVSLHIHSGRLDLAR-------------------------------AQFDQMIERDVV 243
N +++ +I G ++ A+ FD+M+E+D+V
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMV 207
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TW+++IA + QN EA+ F M K + D+ S LSACANL + +GK IH+
Sbjct: 208 TWSALIACFQQNEMYEEAIRTFVGMHKIGVM-VDEVVAVSALSACANLLVVNMGKLIHSL 266
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
++ ++ + NALI Y+K G + +A+K+ +++ + L++I++ +++ GY+K +
Sbjct: 267 SLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYL--LDLISWNSMISGYLKCNLVD 324
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A+ IFDS+ ++DVV+W++M+ GY QN L + + LF+ M G KP+ TL +++S +
Sbjct: 325 NAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACA 384
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQETVSW 482
LA+L+ GK +HA R+G ++ + LI MY K G + A VF +I + +W
Sbjct: 385 RLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI--EKGISTW 442
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
++I+ LA +GL E ++ +F M + + P+ IT++GVL AC H GLV++GQ ++ M +
Sbjct: 443 NALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH 502
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
HKI+P H+ MVDLLGRAG LQEA + MP+ PDV WG+LL AC+ H + ++G+
Sbjct: 503 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGR 562
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
KL+ ++PD+ G + L N+Y+S GKW+D IR M V K G S ++ +
Sbjct: 563 RVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVI 622
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F D HP DAI + + ++ ++K G+ PD VL DV+E+ KE L HSEKLA
Sbjct: 623 HEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLA 682
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
IAFGLI+ T +RIMKNLR+CNDCH+A K I K R+IV
Sbjct: 683 IAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 262/531 (49%), Gaps = 68/531 (12%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L+Q+ R+ + K VH ++K G V+++N+L+N ++ +++ A +VF+E
Sbjct: 81 YPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESS 140
Query: 76 VKTLCSWNTILSAYAKQGRLDLA-------------------------------CEVFNL 104
V SWN+IL+ Y + G ++ A C++F+
Sbjct: 141 VLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDE 200
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
M +D V+W+ +I + + ++ AIR FV M + V+ + S L++C L ++ G
Sbjct: 201 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 260
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
K +HS +K G +N+ N+L+ MY+K GD M+A+ +FD L ++ SWN ++S ++
Sbjct: 261 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 320
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
+D A+A FD M E+DVV+W+SMI+GY+QN E L +F M + S KPD+ TL S
Sbjct: 321 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEM-QMSGFKPDETTLVSV 379
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+SACA L L+ GK +HAYI R +G LI Y K G VE A +
Sbjct: 380 ISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE---------- 429
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+F + ++ + W A+++G NGL + ++++F +M
Sbjct: 430 -----------------------VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 466
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNI 463
+ PN T +L + +D G+ S + + ++ ++ + +AG +
Sbjct: 467 KCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL 526
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
A + N + + +W +++ A +HG E ++ +++EL +PDH
Sbjct: 527 QEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIEL--QPDH 575
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 49/364 (13%)
Query: 10 ISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+S L A+LL N+ GKL+H+ +K G + L+N+L+ Y+K I A+K
Sbjct: 245 VSALSACANLLVVNM-------GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 297
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
+FDE + L SWN+++S Y K +D A +F+ MP +D VSW+++I Y + F
Sbjct: 298 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 357
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ +F EM P + T+ SV+++C L L GK VH+++ + GL+ V + +L++M
Sbjct: 358 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 417
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K G A VF GM K +S TWN++I
Sbjct: 418 YMKCGCVETALEVFYGMIEKGIS-------------------------------TWNALI 446
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ-----IHAYI 304
G + NG +L MF+NM K + P++ T L AC ++ + G+ IH +
Sbjct: 447 LGLAMNGLVESSLDMFSNM-KKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHK 505
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
I+ G ++ + G ++ A++++ + ++ +V + LL K GD
Sbjct: 506 IQPNVKHYG----CMVDLLGRAGKLQEAEELLNRMPMT-PDVATWGALLGACKKHGDSEM 560
Query: 365 ARRI 368
RR+
Sbjct: 561 GRRV 564
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/699 (35%), Positives = 369/699 (52%), Gaps = 66/699 (9%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
A + G L+ A ++F M N D T+I Y A+ ++ MV+ V +T
Sbjct: 54 ALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYT 113
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
VLA+C LG + G++ H V+K G + V N+L+ Y G A VFD
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFD--- 170
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ RDVVTWN MI + G +A +
Sbjct: 171 ----------------------------ESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M K +L+PD+ T+ S + ACA L L+ GK +H+Y D V NA+
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAI-------- 254
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
LD Y K DI A+ +F+ +R++DV++WT+ML G
Sbjct: 255 -------------------------LDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGL 289
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
++G ++A+ LF+ M + + TL +LS + +LD GK IH + L
Sbjct: 290 AKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDL 349
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ AL+ MY+K G+I+ A +VF + R +W ++I LA HG GE+AI LF++M
Sbjct: 350 VLETALVDMYAKCGSIDLALQVFRRMRVRN-VFTWNALIGGLAMHGHGEDAISLFDQMEH 408
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+ PD +T++ +L AC+H GLV++G + MKN +I+P H+ +VDLL RA +
Sbjct: 409 DKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVD 468
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
+A FIENMP++ + V W +LL ACR + DL + +++ +EPD+ G Y L NLY+
Sbjct: 469 DALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYA 528
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+W+ A +RK MK G++KT G SW+++ +H F D H Q + IY + ++
Sbjct: 529 GVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTR 588
Query: 688 EIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+ + G VP TA+VL D+EE+ KE L HSEKLAIA GLISTP + +RI+KNLRVCN
Sbjct: 589 RVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCN 648
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHS +K K+ +REIV RD +RFHHFK+G CSC D+W
Sbjct: 649 DCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 210/485 (43%), Gaps = 100/485 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ H ++K G +F+ N+L+ FY S A VFDE V+ + +WN +++A+
Sbjct: 129 LGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHL 188
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVT 149
+G L+ + F+L+ EM + D + P + T+
Sbjct: 189 NKG---LSEKAFDLLD----------------------------EMTKLDNLRPDEVTMV 217
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S++ +C LG+L GK +HS+ + GL + V N++L+MY K D A+ VF+ +R K
Sbjct: 218 SLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREK 277
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V SW SM++G +++GY EAL +F M
Sbjct: 278 DVLSW-------------------------------TSMLSGLAKSGYFQEALALFQKM- 305
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + ++ D+ TL LSACA L GK IH I + E + + AL+ YAK G +
Sbjct: 306 QLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSI 365
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
++A + +F +R R+V W A++ G
Sbjct: 366 DLALQ---------------------------------VFRRMRVRNVFTWNALIGGLAM 392
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLS 448
+G +DA+ LF M + P++ T A+L S +D G A + +
Sbjct: 393 HGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRME 452
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ + +A ++ A + + +V W +++ A G + A ++ R++EL
Sbjct: 453 HYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIEL 512
Query: 509 GIKPD 513
+PD
Sbjct: 513 --EPD 515
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY--SKAGNINAARRVFNLIHWRQE 478
+ + S+ KQ HA LR+ + S+ LI+ S +G++N AR++F + +
Sbjct: 17 LKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQ-NPD 75
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY- 537
+MI A+ EA+ L+ M+E G+ D+ TY VL AC G V+ G+R++
Sbjct: 76 PFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHC 135
Query: 538 NMMKN-----------VHKIKPTPSHFASMVDLLGRA------------------GLLQE 568
++KN + + F D+ + GL ++
Sbjct: 136 EVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEK 195
Query: 569 AYNFIENMP----LEPDVVAWGSLLSACRVHKNLDLGKI--AAEKLLLIEPDNSGAYSAL 622
A++ ++ M L PD V SL+ AC NL+ GK + K L ++ +N +A+
Sbjct: 196 AFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLD-ENLRVNNAI 254
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
++Y C E A + + +++ SW +
Sbjct: 255 LDMYCKCDDIESAQEV-----FNRIREKDVLSWTSM 285
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/667 (34%), Positives = 368/667 (55%), Gaps = 61/667 (9%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
V S+L + T L + ++H+ ++KT L G V LL R
Sbjct: 6 VMSLLQNATKLNQII---QIHALIIKTSLDGNNFVLAKLLR------------------R 44
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
L SS N ++ AR+ FD++ D WN+MI Y + E++ +F
Sbjct: 45 LFACSSANDLL----------YARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQ 94
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + D ++L+ + AC L+ G+++H +++ + V ALI YAK G
Sbjct: 95 MRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFG 154
Query: 328 GVEIAQKIVEQSGISYL-----------------------------NVIAFTTLLDGYIK 358
+EIA+ I+++ L +++++ T++ G+
Sbjct: 155 DIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHAS 214
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
+GD+G A+++FD +RD+++W++M+ Y + + +A+ LF M P+ T+ ++
Sbjct: 215 LGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSV 274
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
LS + +L GK IH R+ L + +L+ MY+K G+I+ + RVFN ++ R +
Sbjct: 275 LSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR-D 333
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+W++MI+ LA HG GE A+ F +M+ IKP+ +T++GVL+AC+H GLV++G Y+
Sbjct: 334 VFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFT 393
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M V+ + P H+ +VD+LGRAG LQEA I++MP PD + W +LL ACR++KN+
Sbjct: 394 SMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNV 453
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
++ + A LL +EP G Y L N+YS +W+ N+R+ MK + ++K G S +++
Sbjct: 454 EIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEV 513
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
N VH F D HP+ I +++I +K G+ P TASVL D +E KE L HHS
Sbjct: 514 DNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHS 573
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLAIAFGL+ST +T+RI+KNLRVC+DCH AIK I + R I+VRD RFHHF G
Sbjct: 574 EKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGS 633
Query: 779 CSCRDYW 785
CSC+DYW
Sbjct: 634 CSCKDYW 640
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/564 (25%), Positives = 254/564 (45%), Gaps = 111/564 (19%)
Query: 35 VHARIIKCGLHLSVF-LKNSLMNFYAKTES--ISYAKKVFDEMPVKTLCSWNTILSAYAK 91
+HA IIK L + F L L +A + + + YA+ VFDE+P WNT++ AY
Sbjct: 22 IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAY-- 79
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ-FTVTS 150
N ++S+S +F +M + +P ++++
Sbjct: 80 ----------LNSQNPQESMS-------------------LFFQMRHQECIPIDSYSLSL 110
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ +C L D G+K+H+ V+K GL + V +L+ MYAK GD +A+ + D M +
Sbjct: 111 VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPD 170
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN------------------------ 246
+ +NV+++ ++ G ++LA FD+M ERD+V+WN
Sbjct: 171 LVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230
Query: 247 -------SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
SMIA Y++ EAL +F M + +++ PDK T+ S LSAC ++ L +GK
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHEM-QLANVLPDKVTMVSVLSACGDVGALGMGKM 289
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
IH I R + +G +L+ YAK
Sbjct: 290 IHECIERNRIEIDLKLGTSLVDMYAKC--------------------------------- 316
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
GDI + R+F+ + +RDV AW+AM++G +G + A++ F M+ E KPN+ T +L
Sbjct: 317 GDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVL 376
Query: 420 SVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
S S + +D G S + + S + ++ + +AG + A + + + +
Sbjct: 377 SACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPD 436
Query: 479 TVSWTSMIVALAQHG---LGEEA-IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
+ W +++ A + + EEA + L E LE + +++ + + V +
Sbjct: 437 AIVWRALLGACRIYKNVEIAEEATVNLLE--LEPHVDGNYVLLSNIYSQAKEWDKVVNVR 494
Query: 535 RYYNMMKNVHKIKPTPSHFASMVD 558
R MMKN++ I+ P + VD
Sbjct: 495 R---MMKNIN-IQKVPGSSSIEVD 514
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 37/302 (12%)
Query: 12 PLEFYAH--LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
P++ Y+ ++Q+ + ++P G+ +H +++K GL +F++ +L+ YAK I A+
Sbjct: 102 PIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARN 161
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG----- 124
+ DEM L +N +L+ Y + G ++LA ++F+ MP RD VSW T+I + +G
Sbjct: 162 ILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTA 221
Query: 125 --------------------------RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
+ A+R+F EM VLP + T+ SVL++C +
Sbjct: 222 KKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDV 281
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G L GK +H + + + + + SL++MYAK GD + VF+GM ++V +W+ ++
Sbjct: 282 GALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMI 341
Query: 219 SLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+ G +LA F +MI D+ VT+ +++ S G E F +M K +
Sbjct: 342 MGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDV 401
Query: 275 KP 276
P
Sbjct: 402 SP 403
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/756 (33%), Positives = 394/756 (52%), Gaps = 103/756 (13%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMN---FYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
K +H +I LH FL N L+ F+ +T+ Y+ +F + +N++++ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTK---YSYLLFSHTQFPNIFLYNSLINGF 86
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
N + F + +F+ + + + FT
Sbjct: 87 VN-----------------------------NHL--FHETLDLFLSIRKHGLYLHGFTFP 115
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL +CT G +HS VVK G + V SLL++Y+
Sbjct: 116 LVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG----------------- 158
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
SGRL+ A FD++ +R VVTW ++ +GY+ +G EA+ +F M+
Sbjct: 159 --------------SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ +KPD + + LSAC ++ L G+ I Y+ E
Sbjct: 205 -EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM-------------------- 243
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
QK N TTL++ Y K G + AR +FDS+ ++D+V W+ M+ GY
Sbjct: 244 ---QK----------NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N K+ +ELF M++E KP+ +++ LS +SL +LD G+ + R ++L +
Sbjct: 291 NSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFM 350
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+NALI MY+K G + VF + ++ V + I LA++G + + +F + +LG
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I PD T++G+L C H GL++ G R++N + V+ +K T H+ MVDL GRAG+L +A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y I +MP+ P+ + WG+LLS CR+ K+ L + ++L+ +EP N+G Y L N+YS
Sbjct: 470 YRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+W++AA +R M G+KK G+SW++++ KVH F +D HP D IY K+ + +E+
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+ MGFVP T V DVEE+ KE++L +HSEKLA+A GLIST +R++KNLRVC DCH
Sbjct: 590 RLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCH 649
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+K I K+ REIVVRD RFH F G CSC DYW
Sbjct: 650 EVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 124/548 (22%), Positives = 240/548 (43%), Gaps = 107/548 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L++ ++ + +G +H+ ++KCG + V SL++ Y+ + ++ A K+FDE+P ++
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ +W + S Y GR + AI +F +MV+
Sbjct: 177 VVTWTALFSGYTTS-------------------------------GRHREAIDLFKKMVE 205
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V P + + VL++C +GDL +G+ + ++ + + V +L+N+YAK G
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A++VFD M+E+D+VTW++MI GY+ N +
Sbjct: 266 ARSVFD-------------------------------SMVEKDIVTWSTMIQGYASNSFP 294
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E + +F ML++ +LKPD+F++ LS+CA+L L LG+ + I R EF + NA
Sbjct: 295 KEGIELFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI YAK G + +F ++++D+V
Sbjct: 354 LIDMYAKCGA---------------------------------MARGFEVFKEMKEKDIV 380
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHAS 437
A + G +NG K + +F + G P+ T +L + G + +A
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ ++ ++ ++ +AG ++ A R+ + R + W +++ +
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL----VK 496
Query: 498 AIQLFERMLE--LGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
QL E +L+ + ++P + YV + + GG ++ +MM N +K P +
Sbjct: 497 DTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM-NKKGMKKIPGY-- 553
Query: 555 SMVDLLGR 562
S ++L G+
Sbjct: 554 SWIELEGK 561
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 390/660 (59%), Gaps = 53/660 (8%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALG-----DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+++ +VLP + +S+ + + L ++S G+ + F + N+ + +L +
Sbjct: 19 LIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNR-------NLVHEILQLC 71
Query: 191 AKVGDEMMAKAVFDGM-RLK---NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
A+ G M AKA + R+ +V+ NV+++ + G ++LAR FD M+ER +V+WN
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKLGKQIHAYII 305
+MI Y++N + EAL +F M ++ K +FT++S LSAC N + L+ K++H +
Sbjct: 132 TMIGLYTRNRMESEALDIFLEM-RNEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSV 189
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
+T D LN+ T LLD Y K G I A
Sbjct: 190 KTCID---------------------------------LNLYVGTALLDLYAKCGMIKDA 216
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
++F+S++D+ V W++M+ GY QN ++A+ L+R R + N +TLS+++ S+L
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
A+L GKQ+HA +SG S++ V+++ + MY+K G++ + +F+ + + + W ++
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTI 335
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I A+H +E + LFE+M + G+ P+ +T+ +L+ C H GLVE+G+R++ +M+ +
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 395
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
+ P H++ MVD+LGRAGLL EAY I+++P +P WGSLL++CRV+KNL+L ++AA
Sbjct: 396 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAA 455
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
EKL +EP+N+G + L N+Y++ +WE+ A RK ++ VKK +G SW+ I++KVH F
Sbjct: 456 EKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTF 515
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
V + HP+ I + + + + ++ G+ P LHDVE KE++L HSEKLA+ F
Sbjct: 516 SVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVF 575
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GL+ PE++ +RIMKNLR+C DCH +K R I+VRD RFHHF G CSC D+W
Sbjct: 576 GLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 204/428 (47%), Gaps = 68/428 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++AY+K G ++LA +VF+ M R VSW T+I Y A+ +F+EM +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
++FT++SVL++C D KK+H VKT + + V +LL++YAK G A V
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M+ ++ VTW+SM+AGY QN EAL
Sbjct: 220 FESMQ-------------------------------DKSSVTWSSMVAGYVQNKNYEEAL 248
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ + SL+ ++FTL+S + AC+NL L GKQ+HA I ++ F + V ++ +
Sbjct: 249 LLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +L + YI IF ++++++ W
Sbjct: 308 YAKCG-----------------------SLRESYI----------IFSEVQEKNLELWNT 334
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS- 441
++ G+ ++ K+ + LF M ++G PN T S++LSV ++ G++ +R+
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTT 393
Query: 442 -GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + ++ + ++ + +AG ++ A + I + W S++ + + E A
Sbjct: 394 YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEV 453
Query: 501 LFERMLEL 508
E++ EL
Sbjct: 454 AAEKLFEL 461
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 149/317 (47%), Gaps = 19/317 (5%)
Query: 74 MPVKTLCSWN-----TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+ VKT N +L YAK G + A +VF M ++ SV+W++++ Y + ++
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ ++ + + QFT++SV+ +C+ L L GK++H+ + K+G V V +S ++
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVT 244
MYAK G + +F ++ KN+ WN ++S R F++M + + VT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
++S+++ G E F M L P+ + + L + L + + I
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI---LGRAGLLSEAYELI 423
Query: 305 IRTEFDATGPV-GNALISC--YAKVGGVEI-AQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
FD T + G+ L SC Y + E+ A+K+ E + N + + + +
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483
Query: 361 DIGPARRIFDSLRDRDV 377
+I +R++ LRD DV
Sbjct: 484 EIAKSRKL---LRDCDV 497
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 262/703 (37%), Positives = 384/703 (54%), Gaps = 70/703 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AY+ G + A VF+ + +D+V+WT ++ Y+E + A+ F +M P
Sbjct: 189 LIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPN 248
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
F +TS L + L GK +H VKT +V +LL+MYAK GD
Sbjct: 249 PFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGD--------- 299
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
++ A A F+ + DV+ W+ +I+ Y+Q+ + +A M
Sbjct: 300 ----------------------IEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEM 337
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M++ S + P++F+L+ L ACAN+ L+LG+QIH I+ +++ VGNAL+ YA
Sbjct: 338 FLRMMR-SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYA 396
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K +E + IF SL+D + V+W ++
Sbjct: 397 KCRNME---------------------------------NSLEIFSSLQDANEVSWNTII 423
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
VGY Q+G +DA+ +F M T S++L ++ +S+ H QIH+ +S
Sbjct: 424 VGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFN 483
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ V N+LI Y+K G I A +VF I + VSW S+I A A HG A++LF+R
Sbjct: 484 NDTIVCNSLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALHGRATNALELFDR 542
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + IK + +T+V +L+ C GLV QG +N M H+IKP+ H+ +V LLGRAG
Sbjct: 543 MNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAG 602
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
L +A FI ++P P + W +LLS+C VHKN+ LG+ AAEK+L IEP + Y L N
Sbjct: 603 RLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSN 662
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
+Y++ G ++ A RKSM+ VGVKK G SWV+I+ +VH F V HP I N M +
Sbjct: 663 MYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMR-IINAMLE 721
Query: 685 IWDEIK--EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
W +K G+VPD VLHDV+E+ K +ML HSE+LA+A+GL TP +RIMKNL
Sbjct: 722 -WLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNL 780
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R C DCH+ K I K+V REI+VRD RFHHF++G+CSC DYW
Sbjct: 781 RSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 265/581 (45%), Gaps = 101/581 (17%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCG--LHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
A LQ + + G+ VHAR+++ G L F N L+NFYAK ++ A+++FD M
Sbjct: 49 ARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGM 108
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + S+ T++ YA +G + A E+F + +E+ F
Sbjct: 109 PERNRVSFVTLMQGYALRGEFEEALELFRRLQREG-----------HEVNHF-------- 149
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
VL T+ VL + A G L+ G +H+ K G V +L++ Y+ G
Sbjct: 150 ------VLT---TILKVLVTMDAPG-LACG--IHACACKLGHDRNAFVGTALIDAYSLCG 197
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ VFDG ++ +D VTW +M++ YS+
Sbjct: 198 AVCHARCVFDG-------------------------------IVGKDAVTWTAMVSCYSE 226
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
N AL F+ M + + KP+ F L S L A L LGK IH ++T +D
Sbjct: 227 NDIPEYALNTFSKM-RMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPH 285
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
VG AL+ YAK G +E A IF+ +
Sbjct: 286 VGGALLDMYAKCGDIE---------------------------------DAHAIFEMIPH 312
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
DV+ W+ ++ Y Q+ N+ A E+F M+R PN ++LS +L +++A L+ G+QI
Sbjct: 313 DDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQI 372
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H A++ G S L V NAL+ MY+K N+ + +F+ + E VSW ++IV Q G
Sbjct: 373 HNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANE-VSWNTIIVGYCQSGF 431
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
E+A+ +F M + +T+ VL AC + ++ + +++++ T
Sbjct: 432 AEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIV-CN 490
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
S++D + G +++A E++ +E DVV+W S++SA +H
Sbjct: 491 SLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALH 530
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 36/274 (13%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S + P EF + +LQ+ +G+ +H IK G +F+ N+LM+ YAK ++
Sbjct: 344 SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNME- 402
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
N++ E+F+ + + + VSW TIIV Y + G
Sbjct: 403 ----------------NSL--------------EIFSSLQDANEVSWNTIIVGYCQSGFA 432
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
++A+ +F EM +L TQ T +SVL +C + ++HS + K+ + V NSL
Sbjct: 433 EDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSL 492
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV---- 242
++ YAK G A VF+ + +V SWN ++S + GR A FD+M + D+
Sbjct: 493 IDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKAND 552
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
VT+ S+++ G + L +F +M+ D +KP
Sbjct: 553 VTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKP 586
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H+ I K + + NSL++ YAK I A KVF+ + + SWN+I+SAYA GR
Sbjct: 473 IHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGR 532
Query: 95 LDLACEVFNLMPNRD----SVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVT 149
A E+F+ M D V++ +++ G + +F M+ D ++ P+ T
Sbjct: 533 ATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYT 592
Query: 150 SVLASCTALGDLSAGKKV--------HSFVVKTGLSGCVNVTNSLLNMYA 191
++ G L+ K V + LS CV N L YA
Sbjct: 593 CIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYA 642
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/594 (38%), Positives = 351/594 (59%), Gaps = 35/594 (5%)
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
H L+ A F+ + +V +N +I G QN +A+ + M+ + +P+KFT
Sbjct: 76 HFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMI-AHARPNKFTYP 134
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
+ AC E + G Q+HA++I+ + +A I Y G VE A++++ + G S
Sbjct: 135 TLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNS 194
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV------------------------- 377
+VI F ++DGY+K G++ A+ +F S+ D++V
Sbjct: 195 --DVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNE 252
Query: 378 ------VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
++W+AM+ GY + G K+A+E+F M RE +P + LS++L+ ++L +LD G
Sbjct: 253 MKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQG 312
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ IHA + + + AL+ MY+K G ++ A VF + ++E +W +MI L
Sbjct: 313 RWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKME-KKEVFTWNAMICGLGM 371
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
HG E+AI+LF +M + +P+ IT +GVL+AC H G+V++G R +N M+ V+ I+P
Sbjct: 372 HGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGME 431
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+ +VDLLGRAGLL EA + +MP+EP WG+LL ACR H +++LG+ + LL +
Sbjct: 432 HYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLEL 491
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
EP NSG Y+ L N+Y+ G+W+D AN+RK MK GVK + G S + VH F + D
Sbjct: 492 EPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGS 551
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
HPQ IY + + +K GF P+T+ VL D+EE+ KE L++HSEKLAIAFGLI+T
Sbjct: 552 HPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTK 611
Query: 732 ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TT+ ++KNLR+C DCHSA K I ++ DREI+VRD R+HHFK G CSC+D+W
Sbjct: 612 PGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 213/461 (46%), Gaps = 72/461 (15%)
Query: 84 TILSAYAKQ--GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
T++ YA L+ A +VF +PN + + II + AI + +M+
Sbjct: 67 TLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHA 126
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT------------------ 183
P +FT ++ +CTA G +VH+ V+K GLSG V++
Sbjct: 127 RPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARR 186
Query: 184 -------------NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
N++++ Y K G+ AK +F M KNV SWNV+VS G ++ A
Sbjct: 187 MLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEA 246
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R F++M E++ ++W++MI GY + GY EAL +F N+++ ++P KF L+S L+ACAN
Sbjct: 247 RELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVF-NVMQREEIRPRKFVLSSVLAACAN 305
Query: 291 LEKLKLGKQIHAYIIR--TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
L L G+ IHAY+ FDA +G AL+ YAK G +++A
Sbjct: 306 LGALDQGRWIHAYVNNNSNSFDAV--LGTALVDMYAKCGRLDMAWD-------------- 349
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
+F+ + ++V W AM+ G +G +DA+ELF M ++
Sbjct: 350 -------------------VFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKF 390
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAAR 467
+PN TL +LS + +D G +I S G + ++ + +AG + A
Sbjct: 391 RPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAE 450
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V + W +++ A +HG E ++ + +LEL
Sbjct: 451 EVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLEL 491
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 32/239 (13%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N++++ Y K + AK++F M K + SWN ++S AK G ++ A E+FN M ++ +
Sbjct: 200 NAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEI 259
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SW+ +I Y + G +K A+ +F M ++++ P +F ++SVLA+C LG L G+ +H++V
Sbjct: 260 SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYV 319
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
S + +L++MYAK G MA VF+ M K V +W
Sbjct: 320 NNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTW----------------- 362
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
N+MI G +G +A+ +F M K +P+ TL LSACA+
Sbjct: 363 --------------NAMICGLGMHGRAEDAIELFFKMQK-QKFRPNGITLLGVLSACAH 406
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/708 (34%), Positives = 388/708 (54%), Gaps = 70/708 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C N++LS Y++ G+ + A VF+ M RD +SW +++ ++ + G + A+ + +EM+Q
Sbjct: 296 VCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQ 355
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ T T+ L++C L L K VH+FV+ GL + + N+L+ MY K G
Sbjct: 356 TRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAA 412
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ V M +RD VTWN++I G++ N
Sbjct: 413 AQRVCK-------------------------------IMPDRDEVTWNALIGGHADNKEP 441
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL-KLGKQIHAYIIRTEFDATGPVGN 317
A+ F N+L++ + + T+ + LSA + + L G IHA+I+ F+ V +
Sbjct: 442 NAAIEAF-NLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQS 500
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YA+ G D+ + IFD L +++
Sbjct: 501 SLITMYAQCG---------------------------------DLNTSNYIFDVLANKNS 527
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
W A+L G ++A++L M +G + ++ S ++ +L LD G+Q+H+
Sbjct: 528 STWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSL 587
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
++ G S+ V NA + MY K G I+ R+ R + SW +I ALA+HG ++
Sbjct: 588 IIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQR-SWNILISALARHGFFQQ 646
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A + F ML+LG++PDH+T+V +L+AC+HGGLV++G Y++ M + H ++
Sbjct: 647 AREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCII 706
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGRAG L EA NFI MP+ P + W SLL+AC++H NL+L + AA++L ++ +
Sbjct: 707 DLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDS 766
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY N+ +S +W D N+RK M+ +KK SWV+++N+V FG+ D HPQ
Sbjct: 767 AYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAE 826
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ I+E G++PDT+ L D +E+ KE L +HSE++A+AFGLI++ E + LR
Sbjct: 827 IYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLR 886
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLRVC DCHS K + +++ R+I++RDA RFHHF G CSC DYW
Sbjct: 887 IFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 157/599 (26%), Positives = 261/599 (43%), Gaps = 134/599 (22%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+ +G V +IK GL +V + NSL++ + +SI A VFD+
Sbjct: 175 DKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDD-------------- 220
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
M RD++SW +II G + ++ F +M T
Sbjct: 221 -----------------MKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYIT 263
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
++++L C + +L G+ +H VVK+GL V V NSLL+MY++ G A+ V
Sbjct: 264 ISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFV----- 318
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
F +M ERD+++WNSM+A + NG AL +
Sbjct: 319 --------------------------FHKMRERDLISWNSMMASHVDNGNYPRALELLIE 352
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML+ + + T + LSAC NLE LK+ +HA++I +GNAL++ Y K
Sbjct: 353 MLQ-TRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGK-- 406
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
G + A+R+ + DRD V W A++ G+
Sbjct: 407 -------------------------------FGSMAAAQRVCKIMPDRDEVTWNALIGGH 435
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS-LDHGKQIHASALRSGEASS 446
N A+E F + EG N T+ +LS S LDHG IHA + +G
Sbjct: 436 ADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELE 495
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V ++LITMY++ G++N + +F+++ + + +W +++ A A +G GEEA++L +M
Sbjct: 496 TFVQSSLITMYAQCGDLNTSNYIFDVLA-NKNSSTWNAILSANAHYGPGEEALKLIIKMR 554
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-------------------------MK 541
GI D ++ + L+++GQ+ +++ +
Sbjct: 555 NDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEID 614
Query: 542 NVHKIKPTPSHFAS-----MVDLLGRAGLLQ---EAYNFIENMPLEPDVVAWGSLLSAC 592
+V +I P P + ++ L R G Q EA++ + ++ L PD V + SLLSAC
Sbjct: 615 DVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSAC 673
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 234/512 (45%), Gaps = 88/512 (17%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y+K G ++ A VF+ MP R+ SW ++ + +G ++ A++ F M++ V P+ +
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 149 TSVLASCTALGDLSAGK-KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
S++ +C G ++ G +VH+ V+K GL+ V V SLL+ Y G
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFG------------- 108
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
W V + F ++ E ++V+W S++ GY+ NG E + ++
Sbjct: 109 ------WVAEVDM------------VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRR 150
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+ +D + ++ +A+ + +C L LG Q+ +I++ D T V N+LIS +
Sbjct: 151 LRRD-GVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCD 209
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A +FD +++RD ++W +++
Sbjct: 210 SIE---------------------------------EASCVFDDMKERDTISWNSIITAS 236
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
NG + ++E F M K + T+SA+L V S +L G+ +H ++SG S++
Sbjct: 237 VHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNV 296
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V N+L++MYS+AG A VF+ + R + +SW SM+ + +G A++L ML+
Sbjct: 297 CVCNSLLSMYSQAGKSEDAEFVFHKMRER-DLISWNSMMASHVDNGNYPRALELLIEMLQ 355
Query: 508 LGIKPDHITYVGVLTAC--------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
+++T+ L+AC H ++ G + ++ N ++V +
Sbjct: 356 TRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGN------------ALVTM 403
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G+ G + A + MP + D V W +L+
Sbjct: 404 YGKFGSMAAAQRVCKIMP-DRDEVTWNALIGG 434
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 194/389 (49%), Gaps = 43/389 (11%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G ++ A+ FD+M ER+ +WN++++G+ + G+ +A+ F +ML + ++P + AS
Sbjct: 6 GSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHML-EHGVRPSSYVAASL 64
Query: 285 LSACANLEKLKLGK-QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
++AC + G Q+HA++I+ ++C VG
Sbjct: 65 VTACDRSGCMTEGAFQVHAHVIKCG-----------LACDVFVG---------------- 97
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
T+LL Y G + +F + + ++V+WT+++VGY NG K+ + ++R +
Sbjct: 98 ------TSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRL 151
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
R+G N ++ ++ L G Q+ S ++SG +++SV+N+LI+M+ +I
Sbjct: 152 RRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSI 211
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A VF+ + R +T+SW S+I A +G E++++ F +M K D+IT +L
Sbjct: 212 EEASCVFDDMKER-DTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPV 270
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C + G+ + M+ ++ S++ + +AG ++A F+ + E D++
Sbjct: 271 CGSAQNLRWGRGLHGMVVK-SGLESNVCVCNSLLSMYSQAGKSEDA-EFVFHKMRERDLI 328
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+W S++++ ++D G LLIE
Sbjct: 329 SWNSMMAS-----HVDNGNYPRALELLIE 352
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK G+I A+ VF+ + R E SW +++ + G ++A+Q F MLE G++P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEA-SWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFI 573
++TAC G + +G + + +V K F S++ G G + E
Sbjct: 60 VAASLVTACDRSGCMTEGA--FQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVF 117
Query: 574 ENMPLEPDVVAWGSLL 589
+ + EP++V+W SL+
Sbjct: 118 KEIE-EPNIVSWTSLM 132
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 45/232 (19%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
AH + NL + G+ +H+ IIK G + ++ N+ M+ Y K I ++ +
Sbjct: 568 AHAIIGNLTLLDE--GQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRS 625
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
++ SWN ++SA A+ G F+ A F EM
Sbjct: 626 RSQRSWNILISALARH-------------------------------GFFQQAREAFHEM 654
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS-----FVVKTGLSGCVNVTNSLLNMYA 191
+ + P T S+L++C+ G + G S F V TG+ CV ++++
Sbjct: 655 LDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCV----CIIDLLG 710
Query: 192 KVGDEMMAKAVFDGMRLKNVS-SW-NVVVSLHIHSGRLDLARAQFDQMIERD 241
+ G A+ + M + W +++ + IH G L+LAR D++ E D
Sbjct: 711 RAGKLTEAENFINKMPVPPTDLVWRSLLAACKIH-GNLELARKAADRLFELD 761
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 247/712 (34%), Positives = 388/712 (54%), Gaps = 83/712 (11%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S Y+K G + A VF++ RD VSW +++ Y G + +R+F M + +
Sbjct: 148 NSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMG 207
Query: 143 PTQFTVTSVLASCTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
F + SV+ C+ GD + + VH V+K GL V + +++++MYAK G + A
Sbjct: 208 LNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAA 267
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN----G 256
A+F ++ E +VV +N+MIAG+ + G
Sbjct: 268 ALFRSVQ-------------------------------EPNVVMFNTMIAGFCRTETVIG 296
Query: 257 YDF--EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+ EAL +++ ++ ++P +FT +S L AC L+ GKQIH +I+ F
Sbjct: 297 KEVASEALTLYSE-VQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF 355
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+G+ALI Y G +E DG+ R F S
Sbjct: 356 IGSALIDLYFNSGCME-----------------------DGF----------RCFRSSPK 382
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D+V WTAM+ G QN L++ A+ LF + G KP+ +T+S++++ +SLA G+QI
Sbjct: 383 HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
A +SG + N+ + MY+++G+++AA R F + + VSW+++I AQHG
Sbjct: 443 QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME-SHDVVSWSAVISCHAQHGC 501
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
+A+ F+ M++ + P+ IT++GVLTAC+HGGLV++G RYY M + + PT H
Sbjct: 502 ARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCT 561
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGRAG L +A FI N D V W SLL++CR+H++L+ G++ A +++ +EP
Sbjct: 562 CVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPT 621
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+S +Y L N+Y G+ A+ R MK GVKK G SW++++ VH F D HP+
Sbjct: 622 SSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPE 681
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ-MLRHHSEKLAIAFGLISTPEN 733
AIY K+ ++ I+++ D E +EQ ++ HSEKLA+A G+I P++
Sbjct: 682 SSAIYTKLEEMLSRIEKLATT--------DTEISKREQNLMNCHSEKLAVALGMIHLPQS 733
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+MKNLRVC DCHS +K I K +REI++RD RFHHF+ G CSC DYW
Sbjct: 734 APIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCADYW 785
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/595 (40%), Positives = 343/595 (57%), Gaps = 43/595 (7%)
Query: 126 FKNAIRMFVEM--------VQDQV-LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
FK AI + E + D V P+ T +++L C L L G KVH+ +G
Sbjct: 61 FKEAIDILCEQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGF 120
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
V ++N +L+MY K + AK +FD M +++ SWN+++S + +GRL AR FDQ
Sbjct: 121 VPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQ 180
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
M ERD +W +M +GY ++ EAL +F M + + K +KFT++S L+A A ++ L L
Sbjct: 181 MTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHL 240
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
GK+IH +I+R D G + ++ L D Y
Sbjct: 241 GKEIHGHILRIGLDLDG---------------------------------VVWSALSDMY 267
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
K G IG AR IFD DRDVV+WTAM+ Y + G ++ LF +++ G PN +T S
Sbjct: 268 GKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFS 327
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L+ + A+ + GKQ+H R G S ++ L+ MY+K GNI ARRVFN + R
Sbjct: 328 GVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMP-R 386
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ VSWTS+I AQ+G +EA+Q FE +L+ G +PDHIT+VGVL+ACTH GLV++G Y
Sbjct: 387 PDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEY 446
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
++ +K H + T H+A ++DLL R+G LQEA + I+ MP+EPD W SLL CR+H
Sbjct: 447 FDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHG 506
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
NL L K AAE L IEP+N Y+ L N+Y++ G W A +RK M GV K G SW+
Sbjct: 507 NLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWI 566
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKE 711
+I+ +VHVF V D H + I+ + K+ +KE G+VPDT VLHDVEE+ KE
Sbjct: 567 EIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKE 621
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 245/523 (46%), Gaps = 74/523 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ LLQ L+ R G VHA G V + N +++ Y K S+ AK++FDEM
Sbjct: 92 YSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMA 151
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ LCSWN ++S YAK GRL A ++F+ M RD+ SWT + Y + + A+ +F
Sbjct: 152 ERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRA 211
Query: 136 MVQDQVLP-TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M + + +FT++S LA+ A+ L GK++H +++ GL V ++L +MY K G
Sbjct: 212 MQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCG 271
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ +FD ++V SW ++ + GR +
Sbjct: 272 SIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRRE-------------------------- 305
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
E +F+++LK S + P++FT + L+ACA+ +LGKQ+H Y+ R FD +
Sbjct: 306 -----EGFALFSDLLK-SGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSF 359
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ L+ Y K G ++ A+++ +G+ +++++T+L+ GY
Sbjct: 360 AASTLVHMYTKCGNIKNARRVF--NGMPRPDLVSWTSLISGYA----------------- 400
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
QNG +A++ F +++ G +P++ T +LS + +D G +
Sbjct: 401 --------------QNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEY 446
Query: 435 HAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
S + G + LI + S++G + A + + + + W S++ HG
Sbjct: 447 FDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHG 506
Query: 494 LGEEAIQLFERMLELGIKPDH-ITYVGV----LTACTHGGLVE 531
+ A + E + E I+P++ TY + TA GG+ E
Sbjct: 507 NLKLAKRAAEALFE--IEPENPATYTTLANIYATAGLWGGVAE 547
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/579 (39%), Positives = 346/579 (59%), Gaps = 18/579 (3%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMI---AGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
S +D ARA F QM E + WN+++ A + EAL +F+ ML D +KP++FT
Sbjct: 65 SRDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFT 124
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA-----QKI 335
S L ACA +L+ GKQIH I++ F V + L+ Y +E A + +
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 336 VEQSGISYL---------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
V+ G + NV+ + ++DG +++GDI A+ +FD + R VV+W M+ G
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISG 244
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QNG +A+ LF+ M PN TL ++L + + +L+ GK IH A ++
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEID 304
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ +AL+ MYSK G+I+ A +VF + R ++W+++I A A HG E+AI F M
Sbjct: 305 DVLGSALVDMYSKCGSIDEALQVFETLPKRN-AITWSAIIGAFAMHGRAEDAIIHFHLMG 363
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G+ P+ + Y+G+L+AC+H GLVE+G+ +++ M V ++P H+ MVDLLGRAG L
Sbjct: 364 KAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHL 423
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA I NMP+EPD V W +LL AC++HKNL +G+ AE L+ + P +SG+Y AL NLY
Sbjct: 424 EEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLY 483
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+S G WE A +R MK + ++K G SW++I +H F VED H + I + ++
Sbjct: 484 ASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMS 543
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+++ G+ P+T V + +E + + L++HSEK+A+AFGLIST L+I+KNLR+C
Sbjct: 544 MKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICE 603
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+++K I + R+I+VRD RFH F+ G CSC DYW
Sbjct: 604 DCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 230/526 (43%), Gaps = 90/526 (17%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA-KT 61
+P PP ++S + + P K +HA IK G ++ F A +
Sbjct: 15 SPQPPLILS---------KPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSS 65
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
I YA+ VF +MP WNTIL A+ L E
Sbjct: 66 RDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSE--------------------- 104
Query: 122 EIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
A+ +F M+ D +V P +FT SVL +C L GK++H +VK G
Sbjct: 105 -------ALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDE 157
Query: 181 NVTNSLLNMY---AKVGD--EMMAKAV--FDG---MRLK------NVSSWNVVVSLHIHS 224
V ++L+ MY A + D + K V FDG M L NV WN+++ +
Sbjct: 158 FVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRL 217
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + A+ FD+M +R VV+WN MI+GY+QNG+ EA+ +F M + S++ P+ TL S
Sbjct: 218 GDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEM-QSSNIDPNYVTLVSV 276
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L A A + L+LGK IH Y + + + +G+AL+ Y+K G ++
Sbjct: 277 LPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSID-------------- 322
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
A ++F++L R+ + W+A++ + +G +DA+ F M
Sbjct: 323 -------------------EALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMG 363
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNI 463
+ G PN+ +LS S ++ G+ + ++ G + ++ + +AG++
Sbjct: 364 KAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHL 423
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
A + + + V W +++ A H + ++ E ++EL
Sbjct: 424 EEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELA 469
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/579 (39%), Positives = 346/579 (59%), Gaps = 18/579 (3%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMI---AGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
S +D ARA F QM E + WN+++ A + EAL +F+ ML D +KP++FT
Sbjct: 65 SRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFT 124
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA-----QKI 335
S L ACA +L+ GKQIH I++ F V + L+ Y +E A + +
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 336 VEQSGISYL---------NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
V+ G + NV+ + ++DG +++GDI A+ +FD + R VV+W M+ G
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISG 244
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QNG +A+ LF+ M PN TL ++L + + +L+ GK IH A ++
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEID 304
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ +AL+ MYSK G+I+ A +VF + R ++W+++I A A HG E+AI F M
Sbjct: 305 DVLGSALVDMYSKCGSIDKALQVFETLPKRN-AITWSAIIGAFAMHGRAEDAIIHFHLMG 363
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G+ P+ + Y+G+L+AC+H GLVE+G+ +++ M V ++P H+ MVDLLGRAG L
Sbjct: 364 KAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHL 423
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA I NMP+EPD V W +LL AC++HKNL +G+ AE L+ + P +SG+Y AL NLY
Sbjct: 424 EEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLY 483
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+S G WE A +R MK + ++K G SW++I +H F VED H + I + ++
Sbjct: 484 ASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMS 543
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+++ G+ P+T V + +E + + L++HSEK+A+AFGLIST L+I+KNLR+C
Sbjct: 544 MKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICE 603
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+++K I + R+I+VRD RFH F+ G CSC DYW
Sbjct: 604 DCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 229/526 (43%), Gaps = 90/526 (17%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA-KT 61
+P PP ++S + + P K +HA IK G ++ F A +
Sbjct: 15 SPQPPLILS---------KPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSS 65
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
I YA+ VF +MP WNTIL A+ L E
Sbjct: 66 RDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSE--------------------- 104
Query: 122 EIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
A+ +F M+ D +V P +FT SVL +C L GK++H +VK G
Sbjct: 105 -------ALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDE 157
Query: 181 NVTNSLLNMY---AKVGD--EMMAKAV--FDG---MRLK------NVSSWNVVVSLHIHS 224
V ++L+ MY A + D + K V FDG M L NV WN+++ +
Sbjct: 158 FVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRL 217
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + A+ FD+M R VV+WN MI+GY+QNG+ EA+ +F M + S++ P+ TL S
Sbjct: 218 GDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEM-QSSNIDPNYVTLVSV 276
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L A A + L+LGK IH Y + + + +G+AL+ Y+K G ++
Sbjct: 277 LPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSID-------------- 322
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
A ++F++L R+ + W+A++ + +G +DA+ F M
Sbjct: 323 -------------------KALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMG 363
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNI 463
+ G PN+ +LS S ++ G+ + ++ G + ++ + +AG++
Sbjct: 364 KAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHL 423
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
A + + + V W +++ A H + ++ E ++EL
Sbjct: 424 EEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELA 469
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/638 (36%), Positives = 367/638 (57%), Gaps = 53/638 (8%)
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG------DEMMAKA--VFDGMRLKN 210
GDL+ + + T N LL YA+ D ++A A +FD + +
Sbjct: 22 GDLAGAAEPEAVASTTPQRKTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPD 81
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM--IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
S+N ++S H +G + AR F M R+V +WN+M++G S++G EA +F M
Sbjct: 82 AVSYNTLLSCHFAAGDVRGARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARAVFLAM 141
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+S+ NA++SC+A G
Sbjct: 142 PARNSIS----------------------------------------WNAMVSCFAHAGD 161
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ A++ E + N + +T ++ GY+ G + A + F+++ R +V+W A++ GY
Sbjct: 162 MCAAEECFEDAP-DKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYV 220
Query: 389 QNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+N +DA+ +F++MVR+ +PN TLS++L S+L++L G+Q+H + + +
Sbjct: 221 KNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRV 280
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ +L++MY K G+++ A ++F+ + R + ++W +MI A HG G EAI+LFE+M
Sbjct: 281 TAGTSLVSMYCKCGDLDGACKLFSEMRIR-DVIAWNAMISGYAHHGDGREAIELFEKMKS 339
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G++P+ IT+V VLTAC H G+ + G + + M+ V+ I+ H++ MVDLL RAG L+
Sbjct: 340 QGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVDLLCRAGSLE 399
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
A + I +MP +P A+G+LL+A RV+KN++ + AA KL+ P N+GAY L N+Y+
Sbjct: 400 RAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAGAYVQLANIYA 459
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+W D + +R+ MK V KT G+SWV+I +HVF D LHPQ I+ ++ ++ +
Sbjct: 460 VANQWADVSRVRRWMKDNAVVKTPGYSWVEINGVIHVFRSNDRLHPQLSLIHERLCQLEE 519
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+K MG+VPD LHDV+E +K QML HSEKLAIAFGL+ST TLRI KNLRVC D
Sbjct: 520 RMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLRVCGD 579
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+A K I K+ DREI++RD TRFHHF+ G CSC DYW
Sbjct: 580 CHTAAKLISKIEDREIILRDTTRFHHFRSGHCSCGDYW 617
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 171/367 (46%), Gaps = 50/367 (13%)
Query: 77 KTLCSWNTILSAYAKQGR--------LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
KT +N +L+ YA+ R L A +F+ +P D+VS+ T++ + G +
Sbjct: 41 KTTADYNRLLAGYARAARPGGRRDRLLADARHLFDRIPRPDAVSYNTLLSCHFAAGDVRG 100
Query: 129 AIRMFVEMVQDQVLPTQF-TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A +F M T + T+ S L+ A+G+ A + + +S N+++
Sbjct: 101 ARDLFAAMPATARNVTSWNTMLSGLSRSGAVGEARA--VFLAMPARNSIS-----WNAMV 153
Query: 188 NMYAKVGDEMMAKAVF-DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
+ +A GD A+ F D +N W +VS ++ SG ++ A F+ M R +V+WN
Sbjct: 154 SCFAHAGDMCAAEECFEDAPDKENAVLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWN 213
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+++AGY +N +AL +F M++D+ ++P++ TL+S L C+NL L G+Q+H + +
Sbjct: 214 AVVAGYVKNSRAEDALWVFKTMVRDADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTK 273
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
G +L+S Y K G ++ A K+ + I +VIA+ ++ GY GD
Sbjct: 274 LPLSRRVTAGTSLVSMYCKCGDLDGACKLFSEMRIR--DVIAWNAMISGYAHHGD----- 326
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
++A+ELF M +G +PN T A+L+
Sbjct: 327 --------------------------GREAIELFEKMKSQGVEPNWITFVAVLTACIHTG 360
Query: 427 SLDHGKQ 433
D G Q
Sbjct: 361 MCDFGMQ 367
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 65/281 (23%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA--------------------- 90
N++++ +++ ++ A+ VF MP + SWN ++S +A
Sbjct: 119 NTMLSGLSRSGAVGEARAVFLAMPARNSISWNAMVSCFAHAGDMCAAEECFEDAPDKENA 178
Query: 91 -----------KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G ++ A + F MP R VSW ++ Y + R ++A+ +F MV+D
Sbjct: 179 VLWTAMVSGYMDSGHVEKAMQFFEAMPVRSLVSWNAVVAGYVKNSRAEDALWVFKTMVRD 238
Query: 140 -QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V P + T++SVL C+ L L G++VH + K LS V SL++MY K GD
Sbjct: 239 ADVRPNESTLSSVLLGCSNLSALGFGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGDLDG 298
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A +F MR+++V +WN +MI+GY+ +G
Sbjct: 299 ACKLFSEMRIRDVIAWN-------------------------------AMISGYAHHGDG 327
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
EA+ +F M K ++P+ T + L+AC + G Q
Sbjct: 328 REAIELFEKM-KSQGVEPNWITFVAVLTACIHTGMCDFGMQ 367
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L L SNL + G+ VH K L V SL++ Y K
Sbjct: 243 PNESTLSSVL-----LGCSNLSALG--FGRQVHQWCTKLPLSRRVTAGTSLVSMYCKCGD 295
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD-SVSWTTII 117
+ A K+F EM ++ + +WN ++S YA G A E+F M ++ +W T +
Sbjct: 296 LDGACKLFSEMRIRDVIAWNAMISGYAHHGDGREAIELFEKMKSQGVEPNWITFV 350
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 264/745 (35%), Positives = 414/745 (55%), Gaps = 48/745 (6%)
Query: 35 VHARIIKCGLHL------SVFLKNSLMN-FYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+HAR+ G HL + L NSL+N + YA +FD MP T ++T L
Sbjct: 18 LHARLTTSG-HLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPSTFL-FDTALR 75
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
A ++ G P+R + +F M + V P FT
Sbjct: 76 ACSRAGS----------DPHRPFL--------------------LFRRMRRAGVRPDGFT 105
Query: 148 VTSVLASCTALG----DLSAGKKVHSFVVKTGL-SGCVNVTNSLLNMYAKVGDEMMAKAV 202
L C++ L +H+ ++T L S V+NSL++MY ++G A+
Sbjct: 106 F-HFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRA 164
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + +K+ +W +++S G L + Q RDV++W S+IA YS+ EA+
Sbjct: 165 FDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAV 224
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
G F ML + PD+ T+ + LSACA L+ L+LG+ +H + + + ALI
Sbjct: 225 GCFKTMLS-HGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDM 283
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G AQ++ + G ++ ++DGY K G + AR +FD + RD++ + +
Sbjct: 284 YAKCGDFGHAQQVFDALGRGP-RPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNS 342
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GY +G ++A+ LF SM R + +N+T+ +L+ +SL +L G+ +HA +
Sbjct: 343 MMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRL 402
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + + AL+ MY K G ++ A VF + +++ +WT+MI LA +G+G+ A++ F
Sbjct: 403 VEADIYLGTALLDMYMKCGRVDEATIVFQRM-GKRDVHTWTAMIAGLAFNGMGKAALEHF 461
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+M G +P+ ++Y+ VLTAC+H L+ +G+ Y++ M+ ++ I P H+ M+DLLGR
Sbjct: 462 YQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGR 521
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
+GLL EA + ++ MP++P+ V W S+LSACRVHK++DL + AAE LL +EPD G Y L
Sbjct: 522 SGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQL 581
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+Y +WE+A+ IR M+ VKKT G+S + + +VH F V D HP+ I +
Sbjct: 582 YNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAML 641
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+I +K +G+ P T+ + DV+E+ KEQ L HSEKLAIAFGLI+ N + I KNL
Sbjct: 642 EEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNL 701
Query: 743 RVCNDCHSAIKFICKLVDREIVVRD 767
RVC DCHSAIK I +L +REI+VRD
Sbjct: 702 RVCEDCHSAIKLISRLWNREIIVRD 726
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 37/283 (13%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM---P 75
+L + K ++ +G+ +H + + G+ S L +L++ YAK +A++VFD + P
Sbjct: 245 VLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGP 304
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
SWN I+ Y K G +D+A +F+ M RD +++ +++ Y G+ + A+ +F+
Sbjct: 305 RPQ--SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMS 362
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + FTV ++L +C +LG L G+ +H+ + + + + + +LL+MY K G
Sbjct: 363 MRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGR 422
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A VF +M +RDV TW +MIAG + N
Sbjct: 423 VDEATIVF-------------------------------QRMGKRDVHTWTAMIAGLAFN 451
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
G AL F M D +P+ + + L+AC++ L G+
Sbjct: 452 GMGKAALEHFYQMRCD-GFQPNSVSYIAVLTACSHSCLLNEGR 493
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/546 (39%), Positives = 337/546 (61%), Gaps = 35/546 (6%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+V WN++I GY++ G A+ ++ M ++PD T L A + ++LG+ I
Sbjct: 84 NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETI 143
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H+ +IR+ F + V N+L+ YA G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCG--------------------------------- 170
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D+ A ++FD + ++D+VAW +++ G+ +NG ++A+ L+ M +G KP+ +T+ ++LS
Sbjct: 171 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLS 230
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ + +L GK+ H ++ G +L SN L+ +Y++ G + A+ +F+ + + +V
Sbjct: 231 ACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSV 289
Query: 481 SWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
SWTS+IV LA +GLG+EAI+LF+ M + G+ P IT+VG+L AC+H G+V++G Y+
Sbjct: 290 SWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M +KI+P HF MVDLL RAG +++AY +I MP++P+VV W +LL AC VH + D
Sbjct: 350 MSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
L ++A K+L +EP++SG Y L N+Y+S +W D IRK M GV+K G S V++
Sbjct: 410 LAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVG 469
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
N+VH F + D HPQ D IY K+ ++ D ++ G+VP ++V DVEE+ KE L +HSE
Sbjct: 470 NRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSE 529
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
K+AIAF LISTPE +R++KNL+VC DCH AIK + K+ +REIVVRD +RFHHFK G C
Sbjct: 530 KIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSC 589
Query: 780 SCRDYW 785
SC+DYW
Sbjct: 590 SCQDYW 595
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 181/409 (44%), Gaps = 78/409 (19%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
W T+I Y EIG +A+ ++ EM V P T +L + + D+ G+ +HS V
Sbjct: 88 WNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVV 147
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+++G + V NSLL++YA GD A VFD M K++ +WN
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN---------------- 191
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM-LKDSSLKPDKFTLASTLSACAN 290
S+I G+++NG EAL ++ M LK +KPD FT+ S LSACA
Sbjct: 192 ---------------SVINGFAENGKPEEALALYTEMDLK--GIKPDGFTIVSLLSACAK 234
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+ L LGK+ H Y+I+ N L+ YA+ G VE
Sbjct: 235 IGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVE-------------------- 274
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPK 409
A+ +FD + D++ V+WT+++VG NGL K+A+ELF++M +EG
Sbjct: 275 -------------EAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLL 321
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS----NALITMYSKAGNINA 465
P T +L S + G + R E + ++ + ++AG +
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFR---RMSEEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
A + + V W +++ A H G+ + RM L ++P+H
Sbjct: 379 AYEYILKMPMQPNVVIWRTLLGACTVH--GDSDLAELARMKILQLEPNH 425
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 160/351 (45%), Gaps = 72/351 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL++ K + +G+ +H+ +I+ G ++++NSL++ YA ++ A K
Sbjct: 124 YPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYK------ 177
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
VF+ MP +D V+W ++I + E G+ + A+ ++ E
Sbjct: 178 -------------------------VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + P FT+ S+L++C +G L+ GK+ H +++K GL+ ++ +N LL++YA+ G
Sbjct: 213 MDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
AK +FD +M++++ V+W S+I G + N
Sbjct: 273 VEEAKTLFD-------------------------------EMVDKNSVSWTSLIVGLAVN 301
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG-----KQIHAYIIRTEFD 310
G EA+ +F NM L P + T L AC++ +K G + Y I +
Sbjct: 302 GLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIE 361
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
G ++ A+ G V+ A + + + + NV+ + TLL GD
Sbjct: 362 HFG----CMVDLLARAGQVKKAYEYILKMPMQ-PNVVIWRTLLGACTVHGD 407
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK H +IK GL ++ N L++ YA+ + AK +FDEM K SW +++ A
Sbjct: 240 LGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 91 KQGRLDLACEVFNLMPNRD-----SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
G A E+F M +++ +++ I+ + G K F M ++ + +
Sbjct: 300 VNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPR 359
Query: 146 FTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+ A AG KK + +++K + V + +LL GD +A+
Sbjct: 360 IEHFGCMVDLLA----RAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 67/271 (24%)
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNA---------LITMYSKAGNINAARRVFNLIHW 475
++SL +QIHA ++R+G +S+S+A L+++ S ++ A +VF+ I
Sbjct: 27 VSSLTKLRQIHAFSIRNG----VSISDAELGKHLIFYLVSLPSPP-PMSYAHKVFSKIEK 81
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQ 534
W ++I A+ G A+ L+ M G ++PD TY +L A V G+
Sbjct: 82 PINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGE 141
Query: 535 RYYNMMKNVHKIKPTPSHFASMV-------DLLGRAGLLQEAYNFIENMPLEPDVVAWG- 586
++++ S F S++ L G + AY + MP E D+VAW
Sbjct: 142 TIHSVV--------IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNS 192
Query: 587 ----------------------------------SLLSACRVHKNLDLGKIAAEKLLLIE 612
SLLSAC L LGK ++ +
Sbjct: 193 VINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVG 252
Query: 613 -PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
N + + L +LY+ CG+ E+A + M
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 337/546 (61%), Gaps = 35/546 (6%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+V WN++I GY++ G A ++ M ++PD T + A + ++LG+ I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H+ +IR+ F + V N+L+ YA G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCG--------------------------------- 170
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D+ A ++FD + ++D+VAW +++ G+ +NG ++A+ L+ M +G KP+ +T+ ++LS
Sbjct: 171 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLS 230
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ + +L GK++H ++ G +L SN L+ +Y++ G + A+ +F+ + + +V
Sbjct: 231 ACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSV 289
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
SWTS+IV LA +G G+EAI+LF+ M G+ P IT+VG+L AC+H G+V++G Y+
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M+ +KI+P HF MVDLL RAG +++AY +I++MP++P+VV W +LL AC VH + D
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
L + A ++L +EP++SG Y L N+Y+S +W D IRK M GVKK G S V++
Sbjct: 410 LAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVG 469
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
N+VH F + D HPQ DAIY K+ ++ ++ G+VP ++V DVEE+ KE + +HSE
Sbjct: 470 NRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 529
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
K+AIAF LISTPE + + ++KNLRVC DCH AIK + K+ +REIVVRD +RFHHFK G C
Sbjct: 530 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSC 589
Query: 780 SCRDYW 785
SC+DYW
Sbjct: 590 SCQDYW 595
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 181/406 (44%), Gaps = 72/406 (17%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
W T+I Y EIG +A ++ EM V V P T ++ + T + D+ G+ +HS V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+++G + V NSLL++YA GD A VFD M K++ +WN
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN---------------- 191
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
S+I G+++NG EAL ++ M +KPD FT+ S LSACA +
Sbjct: 192 ---------------SVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKI 235
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
L LGK++H Y+I+ N L+ YA+ G VE
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE--------------------- 274
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPKP 410
A+ +FD + D++ V+WT+++VG NG K+A+ELF+ M EG P
Sbjct: 275 ------------EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINAARR 468
T +L S + G + + +R + + ++ + ++AG + A
Sbjct: 323 CEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
+ + V W +++ A H G+ + F R+ L ++P+H
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNH 425
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 160/351 (45%), Gaps = 72/351 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L+++ + +G+ +H+ +I+ G ++++NSL++ YA ++ A K
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYK------ 177
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
VF+ MP +D V+W ++I + E G+ + A+ ++ E
Sbjct: 178 -------------------------VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + P FT+ S+L++C +G L+ GK+VH +++K GL+ ++ +N LL++YA+ G
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
AK +FD +M++++ V+W S+I G + N
Sbjct: 273 VEEAKTLFD-------------------------------EMVDKNSVSWTSLIVGLAVN 301
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG-----KQIHAYIIRTEFD 310
G+ EA+ +F M L P + T L AC++ +K G + Y I +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
G ++ A+ G V+ A + ++ + NV+ + TLL GD
Sbjct: 362 HFG----CMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACTVHGD 407
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 68/330 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH +IK GL ++ N L++ YA+ + AK +FDEM K SW +++ A
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G A E+F M + + +LP + T
Sbjct: 300 VNGFGKEAIELFKYMESTEG------------------------------LLPCEITFVG 329
Query: 151 VLASCTALGDLSAG-------KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+L +C+ G + G ++ + + GC ++++ A+ G A
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC------MVDLLARAGQVKKAYEYI 383
Query: 204 DGMRLK-NVSSWNVVV---SLHIHSGRLDLARAQFDQMIER---DVVTWNSMIAGYSQNG 256
M ++ NV W ++ ++H S + AR Q Q+ D V ++M A Q
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS-EQRW 442
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
D + + ML+D K +L +++G ++H +++ D + P
Sbjct: 443 SDVQKIR--KQMLRDGVKKVPGHSL------------VEVGNRVHEFLMG---DKSHPQS 485
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNV 346
+A+ + ++ G ++ V Q Y++V
Sbjct: 486 DAIYAKLKEMTGRLRSEGYVPQISNVYVDV 515
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 67/271 (24%)
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNA---------LITMYSKAGNINAARRVFNLIHW 475
++S+ +QIHA ++R G +S+S+A L+++ S ++ A +VF+ I
Sbjct: 27 VSSITKLRQIHAFSIRHG----VSISDAELGKHLIFYLVSLPSPP-PMSYAHKVFSKIEK 81
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQ 534
W ++I A+ G A L+ M G ++PD TY ++ A T V G+
Sbjct: 82 PINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGE 141
Query: 535 RYYNMMKNVHKIKPTPSHFASMV-------DLLGRAGLLQEAYNFIENMPLEPDVVAWG- 586
++++ S F S++ L G + AY + MP E D+VAW
Sbjct: 142 TIHSVV--------IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNS 192
Query: 587 ----------------------------------SLLSACRVHKNLDLGKIAAEKLLLIE 612
SLLSAC L LGK ++ +
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 613 -PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
N + + L +LY+ CG+ E+A + M
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/735 (34%), Positives = 399/735 (54%), Gaps = 94/735 (12%)
Query: 85 ILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV----- 137
++ AY K G A +VF+ MP + D VSWT +I Y+ G A + F M
Sbjct: 93 LVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGW 152
Query: 138 -QDQVLPTQFTVTSVLASCTALGD----LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
+ L S A+G L G VH VVK G ++ NS+++MY+
Sbjct: 153 DGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSA 212
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
D A VF+G+ ++ +RDVV+WNS+I+G+
Sbjct: 213 CKDVGGAWRVFNGIPIE-----------------------------QRDVVSWNSLISGF 243
Query: 253 SQNGYDFEALGMFANMLKD--SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
+ NG AL F +M+ + S+++P++ T+ + L +CA L ++ +H YI
Sbjct: 244 TLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI------ 297
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
++ + +A+ +V+ T LLD + + G++ AR IFD
Sbjct: 298 ------------SSRHSSLLVAK-----------DVVVLTALLDMHARCGNLALAREIFD 334
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP------KPNNYTLSAMLSVSSS 424
+ ++VV W+AM+ GYEQ ++A+ LFR M+ EG KPN TL ++++ S
Sbjct: 335 GVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSR 394
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWT 483
L + IH A+ +G +++ALI M +K G+I R+VF+ + TV SW+
Sbjct: 395 LGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWS 454
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI A HG G+ A++LF M G +P+ ITY+ VL+AC+H GLVEQG+ +N M+
Sbjct: 455 SMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKD 514
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+ + PT H+A +VDLLGRAG L EA+N I NMP++ D+ WGSLL+AC +H N LG+I
Sbjct: 515 YGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEI 574
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
+K+L ++ ++ G + L N+Y G+W+D +R ++ G++K G S+++I N+V+
Sbjct: 575 VEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVY 634
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMG-FVPDTASVLHDVEEDVKEQMLR--HHSEK 720
F ED HP+ + IY ++ + + +++ +V +T + D D+ +LR +HSE+
Sbjct: 635 SFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVED--GDIAGLILRCKYHSER 692
Query: 721 LAIAFGLISTPENTT----------LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATR 770
LAIAFGLI ++T +RI KNLRVC DCH+ K + K++DRE++VRDA R
Sbjct: 693 LAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHR 752
Query: 771 FHHFKKGLCSCRDYW 785
FHHF+ G CSC DYW
Sbjct: 753 FHHFRDGFCSCGDYW 767
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 202/479 (42%), Gaps = 103/479 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++K G +S L NS+++ Y+ + + A +VF+ +P++
Sbjct: 184 GSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE-------------- 229
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD---QVLPTQFTV 148
RD VSW ++I + G + A+R F +MV + V P + TV
Sbjct: 230 ---------------QRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTV 274
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L SC LG + VH ++ +SLL
Sbjct: 275 IALLKSCAELGCVETSSWVHEYISSR--------HSSLLVA------------------- 307
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K+V ++ +H G L LAR FD + ++VV W++MIAGY Q EAL +F M
Sbjct: 308 KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQM 367
Query: 269 LKDSSL-----KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
L + ++ KP+ TL S ++AC+ L + IH Y + T D + +ALI
Sbjct: 368 LMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMC 427
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD--RDVVAWT 381
AK G DI R++F + + R VV+W+
Sbjct: 428 AKCG---------------------------------DIEHGRQVFSEMDESTRTVVSWS 454
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+M+ +G K A+ELF M G +PN T ++LS S ++ GK S +
Sbjct: 455 SMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKD 514
Query: 442 -GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGE 496
G + + L+ + +AG+++ A V + + + W S++ A HG LGE
Sbjct: 515 YGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGE 573
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 223/546 (40%), Gaps = 108/546 (19%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
+ ++D+ W ++I N + A+ F M V FT ++L +C AL L
Sbjct: 13 ISHKDTFHWNSLIAK-NATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
+VH+++ + GL+ +L++ Y K G A VFD M +V
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV------------- 118
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML------KDSSLKPDK 278
DVV+W ++I+ YS NG EA F M D
Sbjct: 119 ----------------DVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDV 162
Query: 279 FTLASTLSACA---NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
+L + +SACA L+ G +H +++ F + +GN+++ Y+ V A ++
Sbjct: 163 VSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRV 222
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
I +V+++ +L+ G+ NG +
Sbjct: 223 FNGIPIEQRDVVSWNSLISGFT-------------------------------LNGEAER 251
Query: 396 AVELFRSMVREGP---KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-- 450
A+ F MV EG +PN T+ A+L + L ++ +H S SSL V+
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI--SSRHSSLLVAKD 309
Query: 451 ----NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
AL+ M+++ GN+ AR +F+ + + V W++MI Q EEA++LF +ML
Sbjct: 310 VVVLTALLDMHARCGNLALAREIFDGVEGKN-VVCWSAMIAGYEQGSCPEEALRLFRQML 368
Query: 507 ELG------IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK------IKPTPSHFA 554
G +KP+ +T V V+ AC+ G R +M +HK + +
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLG----ASRSASM---IHKYAVATGLDQDARIAS 421
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEP-DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
+++D+ + G ++ M VV+W S++ A +H GK A E L
Sbjct: 422 ALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALE---LFSE 475
Query: 614 DNSGAY 619
+G Y
Sbjct: 476 MRTGGY 481
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 44/275 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--- 139
+L +A+ G L LA E+F+ + ++ V W+ +I Y + + A+R+F +M+ +
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373
Query: 140 ---QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+V P T+ SV+A+C+ LG + +H + V TGL + ++L++M AK GD
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433
Query: 197 MMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
+ VF M + V SW+ ++ G A F +M E + +T+ S+++
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKP--------------------------------DK 278
S G + F +M KD + P D
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
S L+AC KLG+ + I+ + ++ G
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVG 588
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 114/279 (40%), Gaps = 58/279 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L+S + + L S S ++H + GL + ++L++ AK
Sbjct: 380 PNAVTLVSVIAACSRLGASRSAS-------MIHKYAVATGLDQDARIASALIDMCAKCGD 432
Query: 64 ISYAKKVFDEM--PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
I + ++VF EM +T+ SW++++ A
Sbjct: 433 IEHGRQVFSEMDESTRTVVSWSSMIGAEGIH----------------------------- 463
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCV 180
G K A+ +F EM P + T SVL++C+ G + GK + + K G+S
Sbjct: 464 --GEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTG 521
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSW-NVVVSLHIHSGRLDLARAQFDQMI 238
L+++ + G A V M +K +++ W +++ + H+H + +++
Sbjct: 522 KHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLH------GNCKLGEIV 575
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
E+ +++ +S G+ + ANM +D+ D
Sbjct: 576 EKKILSLDSNSVGHHV---------LLANMYEDAGRWDD 605
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/625 (37%), Positives = 357/625 (57%), Gaps = 38/625 (6%)
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
KK+H+ ++K GL+ + N+LLN Y K G + D ++L
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCG------LIQDALQL--------------- 60
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
FD + RD V W S++ + + AL + ++L + PD F AS
Sbjct: 61 ----------FDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLS-TGFHPDHFVFAS 109
Query: 284 TLSACANLEKL--KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+ ACANL L K GKQ+HA + F V ++LI YAK G + + + + I
Sbjct: 110 LVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDS--I 167
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
S LN I++TT++ GY + G A R+F R++ AWTA++ G Q+G DA LF
Sbjct: 168 SSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFV 227
Query: 402 SMVREGPKPNN-YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M EG + LS+++ ++LA + GKQ+H + G S L +SNALI MY+K
Sbjct: 228 EMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKC 287
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
++ AA+ +F + R++ VSWTS+IV AQHG EEA+ L++ M+ G+KP+ +T+VG+
Sbjct: 288 SDLVAAKYIFCEM-CRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGL 346
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
+ AC+H GLV +G+ + M H I P+ H+ ++DL R+G L EA N I MP+ P
Sbjct: 347 IHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNP 406
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
D W +LLS+C+ H N + A+ LL ++P++ +Y L N+Y+ G WED + +RK
Sbjct: 407 DEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRK 466
Query: 641 SMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTAS 700
M + KK G+S + + HVF + HP RD I M ++ +E+++ G+ PDT+S
Sbjct: 467 LMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSS 526
Query: 701 VLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVD 760
VLHD+++ KE+ L HSE+LA+A+GL+ T +RI+KNLRVC DCH+ +K I + +
Sbjct: 527 VLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITN 586
Query: 761 REIVVRDATRFHHFKKGLCSCRDYW 785
REI VRDA R+HHFK G CSC D+W
Sbjct: 587 REIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 255/550 (46%), Gaps = 76/550 (13%)
Query: 17 AHLLQSNLKS---RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
A LQS L S ++P + K +HA+IIK GL+ + E I
Sbjct: 4 AQSLQSQLCSAARQSPLLAKKLHAQIIKAGLN--------------QHEPIP-------- 41
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
NT+L+AY K G + A ++F+ +P RD V+W +++ N R A+ +
Sbjct: 42 ---------NTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSIS 92
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDL--SAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
++ P F S++ +C LG L GK+VH+ + S V +SL++MYA
Sbjct: 93 RSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYA 152
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K G +AVFD + N SW ++S + SGR A F Q R++ W ++I+G
Sbjct: 153 KFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISG 212
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Q+G +A +F M + D L+S + ACANL +LGKQ+H +I +++
Sbjct: 213 LVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYES 272
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
+ NALI D Y K D+ A+ IF
Sbjct: 273 CLFISNALI---------------------------------DMYAKCSDLVAAKYIFCE 299
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ +DVV+WT+++VG Q+G ++A+ L+ MV G KPN T ++ S + G
Sbjct: 300 MCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKG 359
Query: 432 KQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
+ + + + G + SL L+ ++S++G+++ A + + + +W +++ +
Sbjct: 360 RTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCK 419
Query: 491 QHGLGEEAIQLFERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
+HG + A+++ + +L L KP D +Y+ + G+ E + +M + + K
Sbjct: 420 RHGNTQMAVRIADHLLNL--KPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTL-EAKKA 476
Query: 550 PSHFASMVDL 559
P + S +DL
Sbjct: 477 PGY--SCIDL 484
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/664 (36%), Positives = 370/664 (55%), Gaps = 74/664 (11%)
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G+LS GK VH+ VV+ A FD V +N ++
Sbjct: 30 GELSLGKAVHARVVRA--------------------------ARFD------VVQYNNLI 57
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
+L++ GRL LAR FD M R+ V+ N +++GY+ +G +AL + L+ + ++
Sbjct: 58 ALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL----LRVADFGLNE 113
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+ L+S ++A A++ +G+Q H Y I+ V +A++ Y + ++ A K ++
Sbjct: 114 YVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKYSKK 173
Query: 339 SGISY-------------------------------------LNVIAFTTLLDGYIKIGD 361
G LNV + L+D Y K
Sbjct: 174 HGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDF 233
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
A R+F+ L ++++V+WTA++ Y QN L +DA++LF M EG +PN +T + L+
Sbjct: 234 PHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNS 293
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ LA+L +G + A +++G L V NAL+ MYSK+G++ ARRVF + R + VS
Sbjct: 294 CAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCR-DVVS 352
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W S+I+ A HG EA++ F ML P ++T++GVL+AC GLV++G Y N+M
Sbjct: 353 WNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMM 412
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
+KP H+ MV LL R G L EA FIE+ + DVVAW SLLS+C+V++N LG
Sbjct: 413 KEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLG 472
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
AE++ ++P + G Y L N+Y+ +W+ +R+ M+ +GV+K G SW+Q+ ++
Sbjct: 473 HRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSE 532
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
VHVF ED HP + I K+ ++ D+IK +G+VP+ A LHDVE++ KE+ L +HSEKL
Sbjct: 533 VHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKL 592
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+AFGLI TP+ +RIMKN+R+C+DCH AIK I R IVVRD RFH + G+CSC
Sbjct: 593 ALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSC 652
Query: 782 RDYW 785
DYW
Sbjct: 653 DDYW 656
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 220/482 (45%), Gaps = 88/482 (18%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+N +++ Y K GRL LA +VF+ MP+R+ VS ++ Y GR ++A+ + V D
Sbjct: 53 YNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALL--RVADFG 110
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG--DEMMA 199
L ++ ++S +A+ + G++ H + +K GL+ V +++L+MY + DE +
Sbjct: 111 L-NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVK 169
Query: 200 KAVFDGMRLKNV-------------SSWNVVVSLHIHS---------------------G 225
+ G + + + S+ VV+ +H+ G
Sbjct: 170 YSKKHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYG 229
Query: 226 RLDL---ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
+ D A F+ + E+++V+W +++ Y+QN +AL +F +M + ++P++FT A
Sbjct: 230 KCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDM-EMEGVRPNEFTYA 288
Query: 283 STLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
L++CA L LK G + A ++T PV NAL++ Y+K G VE
Sbjct: 289 VALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVE------------ 336
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
ARR+F S+ RDVV+W ++++GY +G ++A+E F
Sbjct: 337 ---------------------DARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHD 375
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAG 461
M+ P+ T +LS + L +D G ++ G ++ + + G
Sbjct: 376 MLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVG 435
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALA---QHGLGEE-AIQLFERMLELGIKPDHI-T 516
++ A R + V+W S++ + +GLG A Q+F+ +KP + T
Sbjct: 436 RLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQ------LKPKDVGT 489
Query: 517 YV 518
YV
Sbjct: 490 YV 491
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 35/257 (13%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
++ +G VH + +K L L+V++ ++L++ Y K + A +VF+ +P K + SW I
Sbjct: 196 TKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAI 255
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
++AY T NE+ F++A+++F++M + V P +
Sbjct: 256 MTAY-----------------------------TQNEL--FEDALQLFLDMEMEGVRPNE 284
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT L SC L L G + + +KTG G + V N+L+NMY+K G A+ VF
Sbjct: 285 FTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLS 344
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQF-DQMIERDV---VTWNSMIAGYSQNGYDFEA 261
M ++V SWN ++ + H GR A F D + +V VT+ +++ +Q G E
Sbjct: 345 MPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 404
Query: 262 LGMFANMLKDSSLKPDK 278
M+K+ +KP K
Sbjct: 405 FYYLNIMMKEVGVKPGK 421
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 78/200 (39%), Gaps = 62/200 (31%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N+LMN Y+K+ S+ A++VF MP + + SWN+I+ YA GR A E F+ M
Sbjct: 323 NALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDM------ 376
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
+F E V P+ T VL++C LG + G + +
Sbjct: 377 --------------------LFAEEV-----PSYVTFIGVLSACAQLGLVDEGFYYLNIM 411
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA- 230
+K + K G E + +V L GRLD A
Sbjct: 412 MK--------------EVGVKPGKE----------------HYTCMVGLLCRVGRLDEAE 441
Query: 231 RAQFDQMIERDVVTWNSMIA 250
R I DVV W S+++
Sbjct: 442 RFIESNCIGTDVVAWRSLLS 461
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/605 (37%), Positives = 368/605 (60%), Gaps = 41/605 (6%)
Query: 186 LLNMYAKVGDEMMAKAVF-DGMRLK---NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+L + A+ G M AKA MR++ +V+ NV+++ + G ++LAR FD M+ER
Sbjct: 69 ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLEKLKLGKQI 300
+V+WN+MI Y++N + EAL +F M ++ K +FT++S LSAC AN + L+ K++
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEM-RNEGFKFSEFTISSVLSACGANCDALEC-KKL 186
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H ++T D LN+ T LLD Y K G
Sbjct: 187 HCLSMKTSLD---------------------------------LNLYVGTALLDLYAKCG 213
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
I A ++F+S++D+ V W++M+ GY Q+ ++A+ L+R R + N +TLS+++
Sbjct: 214 MINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 273
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S+LA+L GKQ+HA +SG S++ V+++ + MY+K G++ + +F+ + + +
Sbjct: 274 ACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIEL 333
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
W ++I A+H +E + LFE+M + G+ P+ +T+ +L+ C H GLVE+G+R++ +M
Sbjct: 334 -WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 392
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ + + P H++ MVD+LGRAGLL EAY I+++P EP WGSLL++CRV KNL+L
Sbjct: 393 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLEL 452
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
++AA+KL +EP+N+G + L N+Y++ +WE+ A RK ++ VKK +G SW+ I++
Sbjct: 453 AEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKD 512
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KVH+F V + HP+ I + + E+++ G+ P LHDVE KE++L HSEK
Sbjct: 513 KVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEK 572
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+ FGL+ PE +T+RIMKNLR+C DCH +K R I+VRDA RFHHF G CS
Sbjct: 573 LALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCS 632
Query: 781 CRDYW 785
C ++W
Sbjct: 633 CGEFW 637
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 195/408 (47%), Gaps = 68/408 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++AY+K G ++LA +VF+ M R VSW T+I Y A+ +F EM +
Sbjct: 102 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFK 161
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
++FT++SVL++C A D KK+H +KT L + V +LL++YAK G A V
Sbjct: 162 FSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQV 221
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M+ ++ VTW+SM+AGY Q+ EAL
Sbjct: 222 FESMQ-------------------------------DKSSVTWSSMVAGYVQSKNYEEAL 250
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ + SL+ ++FTL+S + AC+NL L GKQ+HA I ++ F + V ++ +
Sbjct: 251 LLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDM 309
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +L + YI IF ++++++ W
Sbjct: 310 YAKCG-----------------------SLRESYI----------IFSEVQEKNIELWNT 336
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ ++ K+ + LF M ++G PN T S++LSV ++ G++ +R+
Sbjct: 337 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTT 395
Query: 443 EASSLSV--SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
S +V + ++ + +AG ++ A + I + W S++ +
Sbjct: 396 YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 158/348 (45%), Gaps = 31/348 (8%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+L YAK G ++ A +VF M ++ SV+W++++ Y + ++ A+ ++ + +
Sbjct: 205 LLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQN 264
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
QFT++SV+ +C+ L L GK++H+ + K+G V V +S ++MYAK G + +F
Sbjct: 265 QFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 324
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
++ KN+ WN ++S R F++M + + VT++S+++ G E
Sbjct: 325 EVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 384
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
F M L P+ + + L + L + + I F+ T + +L+
Sbjct: 385 GRRFFKLMRTTYGLSPNVVHYSCMVDI---LGRAGLLSEAYELIKSIPFEPTASIWGSLL 441
Query: 321 SCYAKVGGVEIAQ----KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
+ +E+A+ K+ E + N + + + + +I +R++ LRD D
Sbjct: 442 ASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKL---LRDCD 498
Query: 377 V-----VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
V +W + KD V +FR V E P + ML
Sbjct: 499 VKKVRGQSWIDI----------KDKVHIFR--VGESSHPRIREICTML 534
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I K G +VF+ +S ++ YAK S+ + +F E+ K + WNTI+S +AK
Sbjct: 284 GKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAK 343
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R P K + +F +M QD + P + T +S+
Sbjct: 344 HAR-----------P--------------------KEVMILFEKMQQDGMHPNEVTFSSL 372
Query: 152 LASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVG 194
L+ C G + G++ + T GLS V + ++++ + G
Sbjct: 373 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 416
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/759 (33%), Positives = 401/759 (52%), Gaps = 102/759 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA GLH +F+ +L++ Y + A+ VF +MP++ + +WN +L+ YA
Sbjct: 119 GRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYAN 178
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ--VLPTQFTVT 149
G + +AI ++M QD + P T+
Sbjct: 179 H-------------------------------GMYHHAIAHLLDM-QDHGGLRPNASTLV 206
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSG---CVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
S+L G L G +H++ ++ L V + +LL+MYAK + A VF GM
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM 266
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
++N VTW+++I G+ EA +F
Sbjct: 267 PVRN-------------------------------DVTWSALIGGFVLCDRMTEAFNLFK 295
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+ML + ++AS L CA+L L +G Q+HA I ++ A N+L+S YAK
Sbjct: 296 DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKA 355
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G I A FD + +D +++ A+L G
Sbjct: 356 ---------------------------------GLINEATMFFDEIAVKDTISYGALLSG 382
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
QNG ++A +F+ M +P+ T+ +++ S LA+L HGK H S + G A
Sbjct: 383 CVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALE 442
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
S+ N+LI MY+K G I+ +R+VF+ + R + VSW +MI HGLG+EA LF M
Sbjct: 443 TSICNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHGLGKEATTLFLGMK 501
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G PD +T++ ++ AC+H GLV +G+ +++ M + + I P H+ MVDLL R GLL
Sbjct: 502 NQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLL 561
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EAY FI++MPL+ DV WG+LL ACR+HKN+DLGK + + + P+ +G + L N++
Sbjct: 562 DEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIF 621
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
S+ G++++AA +R K G KK+ G+SW++I +H F D HP IY+++ I
Sbjct: 622 SAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIM 681
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+IK++G+ DT+ VL D+EE+ KE+ L +HSEKLAIAFG++S E+ T+ + KNLRVC
Sbjct: 682 VDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCG 741
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+AIK++ + +R I+VRD RFHHFK G CSC ++W
Sbjct: 742 DCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 259/535 (48%), Gaps = 68/535 (12%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
VK W L + +G+L LA +VF+ +P D+ ++ +I Y+ +G F AI ++
Sbjct: 31 VKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRS 90
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ +V P ++T VL +C+AL DL AG+ +H+ GL + V+ +L+++Y +
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF M +++V V WN+M+AGY+ +
Sbjct: 151 FGPARNVFAKMPMRDV-------------------------------VAWNAMLAGYANH 179
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G A+ +M L+P+ TL S L A L G IHAY +R
Sbjct: 180 GMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLR--------- 230
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+C +EQ + V+ T LLD Y K + A R+F + R
Sbjct: 231 -----AC-------------LEQ---NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT-LSAMLSVSSSLASLDHGKQI 434
+ V W+A++ G+ +A LF+ M+ EG + T +++ L V +SLA L G Q+
Sbjct: 270 NDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQL 329
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA +SG + L+ SN+L++MY+KAG IN A F+ I + +T+S+ +++ Q+G
Sbjct: 330 HALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGCVQNGK 388
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EEA +F++M ++PD T V ++ AC+H ++ G+ + + + + S
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICN 447
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
S++D+ + G + + + MP DVV+W ++++ +H LGK A L
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH---GLGKEATTLFL 498
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 63/269 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G +HA I K G+H + NSL++ YAK I+ A FDE+ VK S+ +LS
Sbjct: 325 MGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCV 384
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G+ + A +F +M + P T+ S
Sbjct: 385 QNGKAE-------------------------------EAFLVFKKMQACNMEPDIATMVS 413
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+ L L GK H V+ GL+ ++ NSL++MYAK G +++ VFD M ++
Sbjct: 414 LIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARD 473
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V S WN+MIAGY +G EA +F M K
Sbjct: 474 VVS-------------------------------WNTMIAGYGIHGLGKEATTLFLGM-K 501
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQ 299
+ PD T ++AC++ + GK
Sbjct: 502 NQGFAPDDVTFICLIAACSHSGLVTEGKH 530
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/759 (33%), Positives = 401/759 (52%), Gaps = 102/759 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA GLH +F+ +L++ Y + A+ VF +MP++ + +WN +L+ YA
Sbjct: 119 GRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYAN 178
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ--VLPTQFTVT 149
G + +AI ++M QD + P T+
Sbjct: 179 H-------------------------------GMYHHAIAHLLDM-QDHGGLRPNASTLV 206
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSG---CVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
S+L G L G +H++ ++ L V + +LL+MYAK + A VF GM
Sbjct: 207 SLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM 266
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
++N VTW+++I G+ EA +F
Sbjct: 267 PVRN-------------------------------DVTWSALIGGFVLCDRMTEAFNLFK 295
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+ML + ++AS L CA+L L +G Q+HA I ++ A N+L+S YAK
Sbjct: 296 DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKA 355
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G I A FD + +D +++ A+L G
Sbjct: 356 ---------------------------------GLINEATMFFDEIAVKDTISYGALLSG 382
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
QNG ++A +F+ M +P+ T+ +++ S LA+L HGK H S + G A
Sbjct: 383 CVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALE 442
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
S+ N+LI MY+K G I+ +R+VF+ + R + VSW +MI HGLG+EA LF M
Sbjct: 443 TSICNSLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHGLGKEATTLFLGMK 501
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G PD +T++ ++ AC+H GLV +G+ +++ M + + I P H+ MVDLL R GLL
Sbjct: 502 NQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLL 561
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EAY FI++MPL+ DV WG+LL ACR+HKN+DLGK + + + P+ +G + L N++
Sbjct: 562 DEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIF 621
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
S+ G++++AA +R K G KK+ G+SW++I +H F D HP IY+++ I
Sbjct: 622 SAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIM 681
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+IK++G+ DT+ VL D+EE+ KE+ L +HSEKLAIAFG++S E+ T+ + KNLRVC
Sbjct: 682 VDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCG 741
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+AIK++ + +R I+VRD RFHHFK G CSC ++W
Sbjct: 742 DCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 259/535 (48%), Gaps = 68/535 (12%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
VK W L + +G+L LA +VF+ +P D+ ++ +I Y+ +G F AI ++
Sbjct: 31 VKDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRS 90
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ +V P ++T VL +C+AL DL AG+ +H+ GL + V+ +L+++Y +
Sbjct: 91 MLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCAR 150
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VF M +++V V WN+M+AGY+ +
Sbjct: 151 FGPARNVFAKMPMRDV-------------------------------VAWNAMLAGYANH 179
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G A+ +M L+P+ TL S L A L G IHAY +R
Sbjct: 180 GMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLR--------- 230
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+C +EQ + V+ T LLD Y K + A R+F + R
Sbjct: 231 -----AC-------------LEQ---NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR 269
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT-LSAMLSVSSSLASLDHGKQI 434
+ V W+A++ G+ +A LF+ M+ EG + T +++ L V +SLA L G Q+
Sbjct: 270 NDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQL 329
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA +SG + L+ SN+L++MY+KAG IN A F+ I + +T+S+ +++ Q+G
Sbjct: 330 HALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGALLSGCVQNGK 388
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EEA +F++M ++PD T V ++ AC+H ++ G+ + + + + S
Sbjct: 389 AEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI-IRGLALETSICN 447
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
S++D+ + G + + + MP DVV+W ++++ +H LGK A L
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIH---GLGKEATTLFL 498
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 63/269 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G +HA I K G+H + NSL++ YAK I+ A FDE+ VK S+ +LS
Sbjct: 325 MGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCV 384
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G+ + A +F +M + P T+ S
Sbjct: 385 QNGKAE-------------------------------EAFLVFKKMQACNMEPDIATMVS 413
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+ L L GK H V+ GL+ ++ NSL++MYAK G +++ VFD M ++
Sbjct: 414 LIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARD 473
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V S WN+MIAGY +G EA +F M K
Sbjct: 474 VVS-------------------------------WNTMIAGYGIHGLGKEATTLFLGM-K 501
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQ 299
+ PD T ++AC++ + GK
Sbjct: 502 NQGFAPDDVTFICLIAACSHSGLVTEGKH 530
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/704 (33%), Positives = 380/704 (53%), Gaps = 69/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQV 141
N ++S YAK +D A VF+ MP++D++SW ++I G AI +FV M +Q
Sbjct: 449 NALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE 508
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
L + T+ SVL +C G+ VH + VKTGL G ++ N+LL+MY+
Sbjct: 509 LDST-TLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYS---------- 557
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
N S W+ + F M +++VV+W +MI Y++ G +
Sbjct: 558 --------NCSDWHSTNQI-------------FRNMAQKNVVSWTAMITSYTRAGLFDKV 596
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
G+ M+ D +KPD F + S L A E LK GK +H Y IR + PV NAL+
Sbjct: 597 AGLLQEMVLDG-IKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALME 655
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y +E A+ + + + ++D+++W
Sbjct: 656 MYVNCRNMEEARLVFDH---------------------------------VTNKDIISWN 682
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY +N ++ LF M+ + KPN T++ +L +S++SL+ G++IHA ALR
Sbjct: 683 TLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRR 741
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G SNAL+ MY K G + AR +F+ + ++ +SWT MI HG G++A+ L
Sbjct: 742 GFLEDSYTSNALVDMYVKCGALLVARVLFDRLT-KKNLISWTIMIAGYGMHGCGKDAVAL 800
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
FE+M G++PD ++ +L AC H GL +G +++N M+ +KI+P H+ +VDLL
Sbjct: 801 FEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLS 860
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
G L+EA+ FIE+MP+EPD W SLL CR+H+++ L + A+++ +EP+N+G Y
Sbjct: 861 HTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVL 920
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ +WE ++ + G+++ G SW++++ KVHVF ++ HP+ + I
Sbjct: 921 LANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEF 980
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + ++E G P L + V ++ L HS KLA+ FG++ PE +R+ KN
Sbjct: 981 LDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKN 1040
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+VC+ CH A KFI K+ +REI++RD++RFHHF+ G CSCR ++
Sbjct: 1041 SKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSCRGHF 1084
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 261/592 (44%), Gaps = 108/592 (18%)
Query: 88 AYAKQGRLDLACEVFNLMPNR--DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
AY K G L A VF+ MP R D WT+++ Y + G F+ + +F +M V P
Sbjct: 139 AYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDA 198
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
V+ VL +LG ++ G+ +H + K GL V N+L+ +Y++ G + D
Sbjct: 199 HAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCG------CMEDA 252
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M++ FD M RD ++WNS I+GY NG+ A+ +F
Sbjct: 253 MQV-------------------------FDSMHARDAISWNSTISGYFSNGWHDRAVDLF 287
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+ M + + + T+ S L ACA L +GK +H Y +++
Sbjct: 288 SKMWSEGT-EISSVTVLSVLPACAELGFELVGKVVHGYSMKSGL---------------- 330
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAML 384
+ +E Q ++++ S L + Y+K GD+G ARR+FD++ + +V W ++
Sbjct: 331 LWDLESVQSGIDEALGSKLVFM--------YVKCGDMGSARRVFDAMPSKGNVHVWNLIM 382
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
GY + ++++ LF M G P+ + LS +L + L+ G H ++ G
Sbjct: 383 GGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFG 442
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ +V NALI+ Y+K+ I+ A VF+ + Q+T+SW S+I +GL EAI+LF R
Sbjct: 443 TQCAVCNALISFYAKSNMIDNAVLVFDRMP-HQDTISWNSVISGCTSNGLNSEAIELFVR 501
Query: 505 MLELGIKPDHITYVGVLTACT-----------HGGLVEQG--------QRYYNMMKNVHK 545
M G + D T + VL AC HG V+ G +M N
Sbjct: 502 MWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSD 561
Query: 546 IKPTPSHF-----------ASMVDLLGRAGLLQEAYNFIENMPLE---PDVVAWGSLLSA 591
T F +M+ RAGL + ++ M L+ PDV A S+L
Sbjct: 562 WHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHG 621
Query: 592 CRVHKNLDLGKI--------AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
++L GK EKLL + +AL +Y +C E+A
Sbjct: 622 FAGDESLKQGKSVHGYAIRNGMEKLLPVA-------NALMEMYVNCRNMEEA 666
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 176/712 (24%), Positives = 312/712 (43%), Gaps = 133/712 (18%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
P ++ + + L+ + K+ + G + ++ CG+ + ++ A SI+
Sbjct: 157 PPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITE 216
Query: 67 AKKV---FDEMPVKTLCS-WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ + +++ + C+ N +++ Y++ G ++ A +VF+ M RD++SW + I Y
Sbjct: 217 GEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFS 276
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL------ 176
G A+ +F +M + + TV SVL +C LG GK VH + +K+GL
Sbjct: 277 NGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLES 336
Query: 177 --SGCVNVTNS-LLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARA 232
SG S L+ MY K GD A+ VFD M K NV WN++
Sbjct: 337 VQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLI--------------- 381
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
+ GY++ E+L +F M + + PD+ L+ L L
Sbjct: 382 ----------------MGGYAKAAEFEESLLLFEQM-HELGITPDEHALSCLLKCITCLS 424
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA----QKIVEQSGISYLNVIA 348
+ G H Y+++ F V NALIS YAK ++ A ++ Q IS+ +VI+
Sbjct: 425 CARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVIS 484
Query: 349 --------------------------FTTLLD------------------GY-IKIGDIG 363
TTLL GY +K G IG
Sbjct: 485 GCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIG 544
Query: 364 -------------------PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+IF ++ ++VV+WTAM+ Y + GL L + MV
Sbjct: 545 ETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMV 604
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+G KP+ + ++++L + SL GK +H A+R+G L V+NAL+ MY N+
Sbjct: 605 LDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNME 664
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AR VF+ + ++ +SW ++I +++ E+ LF ML L KP+ +T +L A
Sbjct: 665 EARLVFDHVT-NKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAV 722
Query: 525 THGGLVEQGQRY--YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+E+G+ Y + + + T + ++VD+ + G L A + + + ++
Sbjct: 723 ASISSLERGREIHAYALRRGFLEDSYTSN---ALVDMYVKCGALLVARVLFDRLT-KKNL 778
Query: 583 VAWGSLLSACRVHKNLDLGKIAA---EKLL--LIEPDNSGAYSALCNLYSSC 629
++W +++ +H GK A E++ +EPD + ++SA+ LY+ C
Sbjct: 779 ISWTIMIAGYGMH---GCGKDAVALFEQMRGSGVEPD-TASFSAI--LYACC 824
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 99/180 (55%), Gaps = 3/180 (1%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDR--DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
L+ Y+K GD+G AR +FD + R DV WT+++ Y + G ++ V LFR M G
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P+ + +S +L +SL S+ G+ IH + G + +V+NALI +YS+ G + A +V
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ +H R + +SW S I +G + A+ LF +M G + +T + VL AC G
Sbjct: 256 FDSMHAR-DAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 120/242 (49%), Gaps = 9/242 (3%)
Query: 43 GLHLSVFLKNSLMNFYAKTESISYAKKV----FDEMPVKTLCSWNTILSAYAKQGRLDLA 98
G+ VF S+++ +A ES+ K V K L N ++ Y ++ A
Sbjct: 607 GIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEA 666
Query: 99 CEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
VF+ + N+D +SW T+I Y+ + +F +M+ Q P T+T +L + ++
Sbjct: 667 RLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVTMTCILPAVASI 725
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
L G+++H++ ++ G +N+L++MY K G ++A+ +FD + KN+ SW +++
Sbjct: 726 SSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMI 785
Query: 219 SLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+ + G A A F+QM +E D ++++++ +G E F M K+ +
Sbjct: 786 AGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKI 845
Query: 275 KP 276
+P
Sbjct: 846 EP 847
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/564 (39%), Positives = 349/564 (61%), Gaps = 5/564 (0%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEALGMFANMLKDSSLKPDKFTLAS 283
G L A FDQ+ + DV +N+MI ++ ++ +F +M++ S P+++T
Sbjct: 63 GSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVF 122
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
AC N + G+QI + I+ ++ V NA+I YA G V+ A+++ + S
Sbjct: 123 VFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQ- 181
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
++ ++ ++ GY+ G+IG A+ +FD + +RDVV+WT ++ GY Q G K+A++LF M
Sbjct: 182 -DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEM 240
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
++ GP PN +TL++ L+ ++L +LD G+ IH +S + + +L+ MY+K G I
Sbjct: 241 LQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEI 300
Query: 464 NAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A +VF+ + + V W +MI A HG +EAI LFE+M + P+ +T+V +L
Sbjct: 301 DFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLN 360
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
AC+HG LVE+G+ Y+ M + + I+P H+ MVDLLGR+GLL+EA + NMP+ PD
Sbjct: 361 ACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDA 420
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
WG+LL ACR+HK+++ G+ + + ++ D+ G + L NLYS+ G+W++A +R+ +
Sbjct: 421 TIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKI 480
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ G KKT G S +++ H F V D HPQ +Y + ++ ++K G+VP+ VL
Sbjct: 481 EVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVL 540
Query: 703 HDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDR 761
D+ +E+ KE L HSEKLAIAFGLI+TP T +RI+KNLRVC DCH A KFI K+ R
Sbjct: 541 LDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKR 600
Query: 762 EIVVRDATRFHHFKKGLCSCRDYW 785
EI+VRD R+HHFK G CSC+DYW
Sbjct: 601 EIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 236/516 (45%), Gaps = 103/516 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTE--SISYAKKVFDEMPVKTLCSWNTILSAYA 90
K HA +I GL L N L+ + S+SYA ++FD++P + +NT++ A+A
Sbjct: 32 KQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHA 91
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQVLPTQFTVT 149
++P N++R+F+ MV+ LP ++T
Sbjct: 92 -------------VIPTSS-----------------HNSMRIFLSMVRVSGFLPNRYTFV 121
Query: 150 SVLASC-TALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
V +C LG L G+++ +K GL + VTN+++ MYA G A+ VFD
Sbjct: 122 FVFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLD 180
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+++ SWN+++ ++ SG + A+ FD+M ERDVV+W ++IAGY Q G EAL +F M
Sbjct: 181 QDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEM 240
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L+ + P++FTLAS L+ACANL L G+ IH YI ++E + +L+ YAK G
Sbjct: 241 LQ-TGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 299
Query: 329 VEIAQKIV-EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
++ A K+ ++ G+ V W AM+ GY
Sbjct: 300 IDFAAKVFHDEYGLKL--------------------------------KVWPWNAMIGGY 327
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+G +K+A++LF M E PN T A+L+ S HGK + G S+
Sbjct: 328 AMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACS------HGKLVEEG---RGYFKSM 378
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ S + E + M+ L + GL +EA E +
Sbjct: 379 ASSYGI----------------------EPEIEHYGCMVDLLGRSGLLKEAE---ETVFN 413
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+ + PD + +L AC +E+GQR ++K +
Sbjct: 414 MPMAPDATIWGALLGACRIHKDIERGQRIGKIIKEL 449
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 138/270 (51%), Gaps = 36/270 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ + IK GL ++F+ N+++ YA + A++VFD + L SWN ++ Y
Sbjct: 136 GEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVG 195
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A E+F+ M RD VSWTTII Y ++G FK A+ +F EM+Q P +FT+ S
Sbjct: 196 SGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASA 255
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD---GMRL 208
LA+C L L G+ +H ++ K+ + + SLL+MYAK G+ A VF G++L
Sbjct: 256 LAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKL 315
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K V WN+MI GY+ +G EA+ +F M
Sbjct: 316 K--------------------------------VWPWNAMIGGYAMHGKSKEAIDLFEQM 343
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGK 298
K + P+K T + L+AC++ + ++ G+
Sbjct: 344 -KVEKVSPNKVTFVALLNACSHGKLVEEGR 372
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/623 (36%), Positives = 349/623 (56%), Gaps = 68/623 (10%)
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
KK+H+ V++TG S ++ LL +GD A+ VFD M H
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM----------------HK 71
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
R+ L WN++ GY +N FE+L ++ M +D ++PD+FT
Sbjct: 72 PRIFL---------------WNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFV 115
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+ A + L G +HA++++ F G V L+ Y
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMY--------------------- 154
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+K G++ A +F+S++ +D+VAW A L Q G + A+E F M
Sbjct: 155 ------------MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+ + +++T+ +MLS L SL+ G++I+ A + ++ V NA + M+ K GN
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AAR +F + R VSW++MIV A +G EA+ LF M G++P+++T++GVL+AC
Sbjct: 263 AARVLFEEMKQRN-VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 525 THGGLVEQGQRYYNMM--KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+H GLV +G+RY+++M N ++P H+A MVDLLGR+GLL+EAY FI+ MP+EPD
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
WG+LL AC VH+++ LG+ A+ L+ PD + L N+Y++ GKW+ +R M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ +G KK +S V+ + K+H F D HPQ AIY K+ +I +I++MG+VPDT SV
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Query: 703 HDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDRE 762
HDVE + KE L HHSEKLAIAFGLI +R+MKNLR C+DCH+ KF+ L E
Sbjct: 502 HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTE 561
Query: 763 IVVRDATRFHHFKKGLCSCRDYW 785
I++RD RFHHF+ G+CSC+++W
Sbjct: 562 IIMRDKNRFHHFRNGVCSCKEFW 584
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 219/517 (42%), Gaps = 134/517 (25%)
Query: 11 SPL--EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+PL + + LL+++ S P K +HA +++ G L L+ + YA+
Sbjct: 6 TPLTKQMLSELLRAS--SSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYAR 63
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+VFDEM + WNT+ Y + N +P
Sbjct: 64 QVFDEMHKPRIFLWNTLFKGYVR-----------NQLPF--------------------E 92
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-VTNSLL 187
++ ++ +M V P +FT V+ + + LGD S G +H+ VVK G GC+ V L+
Sbjct: 93 SLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF-GCLGIVATELV 151
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
MY K G+ A+ +F+ M++K++ +WN +++ + +G NS
Sbjct: 152 MMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG--------------------NS 191
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
I AL F M D +++ D FT+ S LSAC L L++G++I+ +
Sbjct: 192 AI-----------ALEYFNKMCAD-AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
E D V NA + + K G E A+ + E+ + NV++++T++ GY
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEE--MKQRNVVSWSTMIVGY----------- 286
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
AM NG +++A+ LF +M EG +PN T +LS S
Sbjct: 287 --------------AM------NGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
++ GK+ + ++S + + + R+E + M+
Sbjct: 327 VNEGKRYFSLMVQSNDKN---------------------------LEPRKE--HYACMVD 357
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
L + GL EEA + ++M ++PD + +L AC
Sbjct: 358 LLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGAC 391
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 64/299 (21%)
Query: 10 ISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF + + F G +HA ++K G + L+ Y K +S A+
Sbjct: 105 VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAE 164
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+F+ M VK L +WN L+ + G +A E FN
Sbjct: 165 FLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN------------------------- 199
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+M D V FTV S+L++C LG L G++++ K + + V N+ L+
Sbjct: 200 ------KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
M+ K G+ A+ +F+ M+ +N VV+W++M
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRN-------------------------------VVSWSTM 282
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
I GY+ NG EAL +F M ++ L+P+ T LSAC++ + GK+ + ++++
Sbjct: 283 IVGYAMNGDSREALTLFTTM-QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ ++ R K + ++ ++N+ ++ + K + A+ +F+EM + + SW+T++ YA
Sbjct: 228 IGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYA 287
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
G A +F M N + V++ ++ + G R F MVQ +
Sbjct: 288 MNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEP 347
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
LG ++ + F+ K + + +LL A D ++ + V D +
Sbjct: 348 RKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVL 407
Query: 207 --RLKNVSSWNVVVS-LHIHSGR---LDLARAQFDQMIERDVVTWNSM 248
++ S++V++S ++ +G+ +D R++ ++ + V ++S+
Sbjct: 408 VETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/538 (41%), Positives = 328/538 (60%), Gaps = 35/538 (6%)
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M+ GY +AL +F+ ++ S K D+ TLA+ AC L L GKQIHA+ I+
Sbjct: 1 MMFGYIIGNDGKKALELFS-LIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKA 59
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
FD+ V SGI LD YIK GD+ A
Sbjct: 60 GFDSDLHV----------------------NSGI-----------LDMYIKCGDMVNAGI 86
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F+ + D VAWT+M+ G NG A+ ++ M + P+ YT + ++ SS + +
Sbjct: 87 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 146
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ G+Q+HA+ ++ S V +L+ MY+K GNI A R+F ++ R + W +M+V
Sbjct: 147 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL-WNAMLV 205
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
LAQHG EEA+ LF+ M GI+PD ++++G+L+AC+H GL + Y + M N + I+
Sbjct: 206 GLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 265
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H++ +VD LGRAGL+QEA IE MP + +LL ACR+ +++ GK A +
Sbjct: 266 PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAAR 325
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
L +EP +S AY L N+Y++ +W+D + RK MK VKK GFSW+ ++N +H+F V
Sbjct: 326 LFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVV 385
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
+D HPQ D IY+K+ ++ I+E G+VPDT VL DVE++ KE+ L +HSEKLAIA+GL
Sbjct: 386 DDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGL 445
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
ISTP +TT+R++KNLRVC DCH+AIK+I K+ +REIV+RDA RFHHF+ G+CSC DYW
Sbjct: 446 ISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 503
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 163/383 (42%), Gaps = 66/383 (17%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
K A+ +F + + Q T+ + +C L L GK++H+ +K G ++V + +
Sbjct: 12 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
L+MY K GD + A VF+ + D V W
Sbjct: 72 LDMYIKCGDMVNAGIVFNYISAP-------------------------------DDVAWT 100
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
SMI+G NG + +AL ++ M + S + PD++T A+ + A + + L+ G+Q+HA +I+
Sbjct: 101 SMISGCVDNGNEDQALRIYHRM-RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK 159
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ + VG +L+ YAK G +E D Y
Sbjct: 160 LDCVSDPFVGTSLVDMYAKCGNIE-----------------------DAY---------- 186
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
R+F + R++ W AMLVG Q+G ++AV LF+SM G +P+ + +LS S
Sbjct: 187 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 246
Query: 427 SLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
+ +H+ G + + L+ +AG + A +V + ++ ++
Sbjct: 247 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL 306
Query: 486 IVALAQHGLGEEAIQLFERMLEL 508
+ A G E ++ R+ L
Sbjct: 307 LGACRIQGDVEXGKRVAARLFAL 329
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 7/255 (2%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
IL Y K G + A VFN + D V+WT++I + G A+R++ M Q +V+P
Sbjct: 71 ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 130
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
++T +++ + + + L G+++H+ V+K V SL++MYAK G+ A +F
Sbjct: 131 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFK 190
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
M ++N++ WN ++ G + A F M IE D V++ +++ S G E
Sbjct: 191 KMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSE 250
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A +M D ++P+ + + A L + L ++ I F A+ + AL+
Sbjct: 251 AYEYLHSMPNDYGIEPEIEHYSCLVDA---LGRAGLVQEADKVIETMPFKASASINRALL 307
Query: 321 SCYAKVGGVEIAQKI 335
G VE +++
Sbjct: 308 GACRIQGDVEXGKRV 322
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 7/200 (3%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S + P E+ +A L++++ G+ +HA +IK F+ SL++ YAK +I
Sbjct: 125 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIED 184
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNE 122
A ++F +M V+ + WN +L A+ G + A +F M + D VS+ I+ +
Sbjct: 185 AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 244
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G A M D + + S L ALG ++ + ++
Sbjct: 245 AGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD--ALGRAGLVQEADKVIETMPFKASASI 302
Query: 183 TNSLLNMYAKVGDEMMAKAV 202
+LL GD K V
Sbjct: 303 NRALLGACRIQGDVEXGKRV 322
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/662 (35%), Positives = 371/662 (56%), Gaps = 66/662 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++L Y K G ++ A +FN + V W ++V + +I + +F +M +
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P QFT +L +CT ++ G+++HS VKTG + V+ L++MY+K G
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYG-------- 394
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
W L+ AR + + E+DVV+W SMIAGY Q+ +AL
Sbjct: 395 -----------W------------LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M K + PD LAS +S CA + ++ G QIHA I + + + NAL++
Sbjct: 432 AAFKEMQK-CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNL 490
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G +I E AF++ F+ + +D + W
Sbjct: 491 YARCG------RIRE----------AFSS-----------------FEEIEHKDEITWNG 517
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ Q+GL+++A+++F M + G K N +T + LS S++LA + GKQIHA +++G
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V NALI++Y K G+ A+ F+ + R E VSW ++I + +QHG G EA+ LF
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNE-VSWNTIITSCSQHGRGLEALDLF 636
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + GIKP+ +T++GVL AC+H GLVE+G Y+ M + + I+P P H+A ++D+ GR
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A FIE MP+ D + W +LLSAC+VHKN+++G+ AA+ LL +EP +S +Y L
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N Y+ KW + +RK M+ GV+K G SW++++N VH F V D LHP + IYN +
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
A I D + ++G+ + + HD E++ ++ HSEKLA+ FGL+S P LR++KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876
Query: 743 RV 744
RV
Sbjct: 877 RV 878
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 292/659 (44%), Gaps = 126/659 (19%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y+K G + A VF + RD+VSW ++ Y + G + A+ ++ +M + V+
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + ++SVL+SCT + G+ +H+ K G + V N+++ +Y + G +A+ V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M ++ ++N ++S G++Q G+ AL
Sbjct: 201 FCDMPHRDTVTFNTLIS-------------------------------GHAQCGHGEHAL 229
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + S L PD T++S L+ACA+L L+ G Q+H+Y+ + + + +L+
Sbjct: 230 EIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G VE T L+ IF+S +VV W
Sbjct: 289 YVKCGDVE-------------------TALV--------------IFNSSDRTNVVLWNL 315
Query: 383 MLVGYEQ-NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
MLV + Q N L K + ELF M G +PN +T +L + +D G+QIH+ ++++
Sbjct: 316 MLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S + VS LI MYSK G + ARRV ++ ++ VSWTSMI QH ++A+
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAGYVQHECCKDALAA 433
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + GI PD+I ++ C + QG + + + V S + ++V+L
Sbjct: 434 FKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI-YVSGYSGDVSIWNALVNLYA 492
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLS----------ACRVHKNLDLGKIAAEKLLLI 611
R G ++EA++ E + D + W L+S A +V +D + +
Sbjct: 493 RCGRIREAFSSFEEIE-HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFV 551
Query: 612 EPDNSGAY--------------------------SALCNLYSSCGKWEDAANIRKSMKYV 645
++ A +AL +LY CG +EDA M++
Sbjct: 552 SALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA-----KMEFS 606
Query: 646 GVKKTQGFSWVQIQNKV--HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ + SW I H G+E ++D++K+ G P+ + +
Sbjct: 607 EMSERNEVSWNTIITSCSQHGRGLE-------------ALDLFDQMKKEGIKPNDVTFI 652
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 213/435 (48%), Gaps = 44/435 (10%)
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
+V E+ AKAV G+ + N+++ L+ +G + AR F+++ RD V+W +M++G
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSG 117
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y+QNG EALG++ M + + + P + L+S LS+C E G+ IHA + F +
Sbjct: 118 YAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCS 176
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
VGNA+I+ Y + G +A+++ + + + + F TL+ G+
Sbjct: 177 EIFVGNAVITLYLRCGSFRLAERVF--CDMPHRDTVTFNTLISGHA-------------- 220
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
Q G + A+E+F M G P+ T+S++L+ +SL L G
Sbjct: 221 -----------------QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
Q+H+ ++G +S + +L+ +Y K G++ A +FN R V W M+VA Q
Sbjct: 264 TQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-RTNVVLWNLMLVAFGQ 322
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
++ +LF +M GI+P+ TY +L CT ++ G++ +++ K
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV---KTGFESD 379
Query: 552 HFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEK 607
+ S ++D+ + G L++A +E M E DVV+W S+++ H+ L +
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438
Query: 608 LLLIEPDNSGAYSAL 622
I PDN G SA+
Sbjct: 439 KCGIWPDNIGLASAI 453
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 211/485 (43%), Gaps = 98/485 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P +F Y +L++ +R +G+ +H+ +K G +++ L++ Y+K + A+
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+V + + K + SW ++++ Y + C K+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHE----CC---------------------------KD 429
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ F EM + + P + S ++ C + + G ++H+ + +G SG V++ N+L+N
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+YA+ G A + F+ + K+ +WN +VS
Sbjct: 490 LYARCGRIREAFSSFEEIEHKDEITWNGLVS----------------------------- 520
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
G++Q+G EAL +F M S +K + FT S LSA ANL ++K GKQIHA +I+T
Sbjct: 521 --GFAQSGLHEEALKVFMRM-DQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
VGNALIS Y K G E A+
Sbjct: 578 HSFETEVGNALISLYGKCGSFE---------------------------------DAKME 604
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +R+ V+W ++ Q+G +A++LF M +EG KPN+ T +L+ S + +
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 429 DHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ G S + G +I ++ +AG ++ A++ + + + W +++
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 488 ALAQH 492
A H
Sbjct: 725 ACKVH 729
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/662 (35%), Positives = 371/662 (56%), Gaps = 66/662 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++L Y K G ++ A +FN + V W ++V + +I + +F +M +
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P QFT +L +CT ++ G+++HS VKTG + V+ L++MY+K G
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYG-------- 394
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
W L+ AR + + E+DVV+W SMIAGY Q+ +AL
Sbjct: 395 -----------W------------LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M K + PD LAS +S CA + ++ G QIHA I + + + NAL++
Sbjct: 432 AAFKEMQK-CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNL 490
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G +I E AF++ F+ + +D + W
Sbjct: 491 YARCG------RIRE----------AFSS-----------------FEEIEHKDEITWNG 517
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ Q+GL+++A+++F M + G K N +T + LS S++LA + GKQIHA +++G
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V NALI++Y K G+ A+ F+ + R E VSW ++I + +QHG G EA+ LF
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNE-VSWNTIITSCSQHGRGLEALDLF 636
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + GIKP+ +T++GVL AC+H GLVE+G Y+ M + + I+P P H+A ++D+ GR
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A FIE MP+ D + W +LLSAC+VHKN+++G+ AA+ LL +EP +S +Y L
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N Y+ KW + +RK M+ GV+K G SW++++N VH F V D LHP + IYN +
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
A I D + ++G+ + + HD E++ ++ HSEKLA+ FGL+S P LR++KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876
Query: 743 RV 744
RV
Sbjct: 877 RV 878
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 292/659 (44%), Gaps = 126/659 (19%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y+K G + A VF + RD+VSW ++ Y + G + A+ ++ +M + V+
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + ++SVL+SCT + G+ +H+ K G + V N+++ +Y + G +A+ V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M ++ ++N ++S G++Q G+ AL
Sbjct: 201 FCDMPHRDTVTFNTLIS-------------------------------GHAQCGHGEHAL 229
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + S L PD T++S L+ACA+L L+ G Q+H+Y+ + + + +L+
Sbjct: 230 EIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G VE T L+ IF+S +VV W
Sbjct: 289 YVKCGDVE-------------------TALV--------------IFNSSDRTNVVLWNL 315
Query: 383 MLVGYEQ-NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
MLV + Q N L K + ELF M G +PN +T +L + +D G+QIH+ ++++
Sbjct: 316 MLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S + VS LI MYSK G + ARRV ++ ++ VSWTSMI QH ++A+
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAGYVQHECCKDALAA 433
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + GI PD+I ++ C + QG + + + V S + ++V+L
Sbjct: 434 FKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI-YVSGYSGDVSIWNALVNLYA 492
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLS----------ACRVHKNLDLGKIAAEKLLLI 611
R G ++EA++ E + D + W L+S A +V +D + +
Sbjct: 493 RCGRIREAFSSFEEIE-HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFV 551
Query: 612 EPDNSGAY--------------------------SALCNLYSSCGKWEDAANIRKSMKYV 645
++ A +AL +LY CG +EDA M++
Sbjct: 552 SALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDA-----KMEFS 606
Query: 646 GVKKTQGFSWVQIQNKV--HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ + SW I H G+E ++D++K+ G P+ + +
Sbjct: 607 EMSERNEVSWNTIITSCSQHGRGLE-------------ALDLFDQMKKEGIKPNDVTFI 652
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 213/435 (48%), Gaps = 44/435 (10%)
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
+V E+ AKAV G+ + N+++ L+ +G + AR F+++ RD V+W +M++G
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSG 117
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y+QNG EALG++ M + + + P + L+S LS+C E G+ IHA + F +
Sbjct: 118 YAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCS 176
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
VGNA+I+ Y + G +A+++ + + + + F TL+ G+
Sbjct: 177 EIFVGNAVITLYLRCGSFRLAERVF--CDMPHRDTVTFNTLISGHA-------------- 220
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
Q G + A+E+F M G P+ T+S++L+ +SL L G
Sbjct: 221 -----------------QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
Q+H+ ++G +S + +L+ +Y K G++ A +FN R V W M+VA Q
Sbjct: 264 TQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-RTNVVLWNLMLVAFGQ 322
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
++ +LF +M GI+P+ TY +L CT ++ G++ +++ K
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV---KTGFESD 379
Query: 552 HFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEK 607
+ S ++D+ + G L++A +E M E DVV+W S+++ H+ L +
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438
Query: 608 LLLIEPDNSGAYSAL 622
I PDN G SA+
Sbjct: 439 KCGIWPDNIGLASAI 453
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 211/485 (43%), Gaps = 98/485 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P +F Y +L++ +R +G+ +H+ +K G +++ L++ Y+K + A+
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+V + + K + SW ++++ Y + C K+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHE----CC---------------------------KD 429
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ F EM + + P + S ++ C + + G ++H+ + +G SG V++ N+L+N
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+YA+ G A + F+ + K+ +WN +VS
Sbjct: 490 LYARCGRIREAFSSFEEIEHKDEITWNGLVS----------------------------- 520
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
G++Q+G EAL +F M S +K + FT S LSA ANL ++K GKQIHA +I+T
Sbjct: 521 --GFAQSGLHEEALKVFMRM-DQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
VGNALIS Y K G E A+
Sbjct: 578 HSFETEVGNALISLYGKCGSFE---------------------------------DAKME 604
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +R+ V+W ++ Q+G +A++LF M +EG KPN+ T +L+ S + +
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 429 DHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ G S + G +I ++ +AG ++ A++ + + + W +++
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 488 ALAQH 492
A H
Sbjct: 725 ACKVH 729
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/711 (34%), Positives = 391/711 (54%), Gaps = 75/711 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S YA+ G + A +VF+ RD VSW ++ Y G + +R+F M + +
Sbjct: 153 NSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIG 212
Query: 143 PTQFTVTSVLASCTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
F + SV+ C D + VH VVK G V + ++++ MYAK
Sbjct: 213 LNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAK-------- 264
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN----G 256
G L A A F +++ +VV +N+MIAG ++ G
Sbjct: 265 -----------------------KGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVG 301
Query: 257 YDF--EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
D EAL +++ ++ ++P +FT +S + AC ++ GKQIH +++ F
Sbjct: 302 TDVLREALSLYSE-VQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDF 360
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+G+ALI Y G +E DG+ R F S+
Sbjct: 361 IGSALIDLYLNSGCME-----------------------DGF----------RCFTSVPK 387
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+DVV WTAM+ G QN L + A+ LF ++ G KP+ +T+S++++ +SLA G+QI
Sbjct: 388 QDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQI 447
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
A +SG ++ N+ I MY+++G+++AA R F + + VSW+++I + AQHG
Sbjct: 448 QCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEME-SHDIVSWSAVISSHAQHGC 506
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
+A++ F M++ + P+ IT++GVLTAC+HGGLV++G +YY MK + + PT H
Sbjct: 507 ARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCT 566
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGRAG L +A FI + + V W SLL++CR+H++++ G++ A++++ ++P
Sbjct: 567 CVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPS 626
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+S +Y L N+Y G+ A+ IR MK GVKK G SW+++++ VH F D HP+
Sbjct: 627 SSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPE 686
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+AIY+K+A++ +I ++ D +S D ++ + HSEKLA+A GLI P++
Sbjct: 687 SNAIYSKLAEMLSKIDKLT-ATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSA 745
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+MKNLRVC DCH +K I K REIV+RDA RFHHF+ G CSC DYW
Sbjct: 746 PIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/685 (34%), Positives = 372/685 (54%), Gaps = 67/685 (9%)
Query: 101 VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
+ L P R V+WT +I + G F +A+ F +M ++ + P FT + TAL
Sbjct: 14 LLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCL 73
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
AGK++H+ +K G V S +MY+K G + F+ RL
Sbjct: 74 PFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLK------FEAQRL------------ 115
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
FD+M R+V WN+ I+ +G +A+ F + +PD T
Sbjct: 116 -------------FDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGG-EPDLIT 161
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
+ L+ACA+ L LG+Q+H +IR+ F+ V N +I Y K VE+A+ +
Sbjct: 162 FCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMV----- 216
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
F+ + R+ V+W M+ EQN + A +F
Sbjct: 217 ----------------------------FNGMGRRNSVSWCTMVAACEQNDEKEKACVVF 248
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
+EG + +Y +S+++S + ++ L+ G+ +HA A+++ + V +AL+ MY K
Sbjct: 249 LMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKC 308
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G+I +VF+ + R VSW +MI A G + A+ LFE M + +++T + V
Sbjct: 309 GSIEDCEQVFHEMPERN-LVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICV 366
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L+AC+ GG V+ G + M++ ++I+P H+A + D+LGRAG+++ AY F++ MP+ P
Sbjct: 367 LSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRP 426
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
+ WG+LL+ACRV+ +LGKIAA+ L ++P +SG + L N++++ G+W++A +RK
Sbjct: 427 TISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRK 486
Query: 641 SMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTAS 700
MK VG+KK G SWV +NKVHVF +D H + I + K+ E++ G++PDT
Sbjct: 487 EMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNY 546
Query: 701 VLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVD 760
L+D+EE+ K + +HSEK+A+AFGLI+ P +RI KNLR+C DCHSA KFI +V
Sbjct: 547 ALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVG 606
Query: 761 REIVVRDATRFHHFKKGLCSCRDYW 785
REI+VRD RFH F+ CSCRD+W
Sbjct: 607 REIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 68/378 (17%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
PF GK +HA +K G F+ S + Y+KT A+++FDEMP + + WN A
Sbjct: 74 PFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWN----A 129
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y LD GR AI F+E + P T
Sbjct: 130 YISNAVLD---------------------------GRPGKAIDKFIEFRRVGGEPDLITF 162
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+ L +C L G+++H V+++G G V+V N ++++Y K + +A+ VF+GM
Sbjct: 163 CAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGM-- 220
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
GR R+ V+W +M+A QN +A +F M
Sbjct: 221 ----------------GR-------------RNSVSWCTMVAACEQNDEKEKACVVFL-M 250
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ ++ + ++S +SA A + L+ G+ +HA ++ + VG+AL+ Y K G
Sbjct: 251 GRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGS 310
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM---LV 385
+E +++ + + N++++ ++ GY GD+ A +F+ ++ V + + L
Sbjct: 311 IEDCEQVFHE--MPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVANYVTLICVLS 368
Query: 386 GYEQNGLNKDAVELFRSM 403
+ G K E+F SM
Sbjct: 369 ACSRGGAVKLGNEIFESM 386
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +K + +F+ ++L++ Y K SI ++VF EMP + L SWN ++S YA
Sbjct: 279 GRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAH 338
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
QG +D+A +F M + ++ T+I + R A+++ E+ + + +
Sbjct: 339 QGDVDMAMTLFEEMQSEAVANYVTLICVLSACSR-GGAVKLGNEIFESMRDRYRIEPGAE 397
Query: 152 LASCTA--LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RL 208
+C A LG ++ + FV K + ++V +LLN G+ + K D + +L
Sbjct: 398 HYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKL 457
Query: 209 KNVSSWNVVV--SLHIHSGRLDLA 230
S N V+ ++ +GR D A
Sbjct: 458 DPKDSGNHVLLSNMFAAAGRWDEA 481
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/661 (36%), Positives = 380/661 (57%), Gaps = 38/661 (5%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
++A+ + M+ +P +T +L + + + VH+ VVK G+ +V SL
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV-VTW 245
+ YA GD A+A+ S R ERD V W
Sbjct: 85 VTAYAAGGDGAAARALL--------------------SER------------ERDTPVVW 112
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKLGKQIHAYI 304
N++I+G+++ EA F +M + + P T S LSAC + LG Q+H +
Sbjct: 113 NALISGHNRCRRFGEACCSFVDMAR-AGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRV 171
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+ + V NAL+ YA+ +E A K+ + G+ +V+++T+LL G ++G +
Sbjct: 172 VGSGVLPDLRVENALVDMYAECADMESAWKLFD--GMQVRSVVSWTSLLSGLTRLGRVDE 229
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
AR +F + +RD V+WTAM+ GY Q ++A+E+FR M + +T+ ++++ +
Sbjct: 230 ARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQ 289
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +L+ G+ + R G V NALI MYSK G+I A VF +H R + +WT+
Sbjct: 290 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHR-DKFTWTA 348
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
+I+ LA +G GEEAI++F RM+ + PD +T++GVLTACTH GLV++G+ ++ M+ +
Sbjct: 349 IILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETY 408
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
I P H+ ++DL GRAG + EA + I+ MP+ P+ WG+LL+ACRVH N ++G++
Sbjct: 409 NIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELV 468
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
E+LL ++P+NS Y+ L N+Y+ C +WED +R ++ G+KK G S +++ +H
Sbjct: 469 TERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHE 528
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F D HP IY K+ I +++ +G+ PD V +V E+ K+++L HSEKLAIA
Sbjct: 529 FVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIA 588
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
F L+S+ NT +RI+KNLR+C DCH+AIK I +L RE+VVRD TRFHHF+ G CSC+DY
Sbjct: 589 FALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDY 648
Query: 785 W 785
W
Sbjct: 649 W 649
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 234/509 (45%), Gaps = 69/509 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL++ + + + VHA ++K G+ + + SL+ YA + A+ + E
Sbjct: 46 FPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERE 105
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
T WN ++S +N RF A FV+
Sbjct: 106 RDTPVVWNALISG-------------------------------HNRCRRFGEACCSFVD 134
Query: 136 MVQDQVLPTQFTVTSVLASC-TALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M + PT T SVL++C GD+ G +VH VV +G+ + V N+L++MYA+
Sbjct: 135 MARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECA 194
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
D A +FDGM++++V SW ++S GR+D AR F +M ERD V+W +MI GY Q
Sbjct: 195 DMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQ 254
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
EAL MF M + S++ D+FT+ S ++ACA L L++G+ + Y+ R
Sbjct: 255 AARFREALEMFREM-QCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAF 313
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
VGNALI Y+K G +E A LD +F +
Sbjct: 314 VGNALIDMYSKCGSIERA--------------------LD-------------VFKDMHH 340
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD WTA+++G NG ++A+E+F M+ P+ T +L+ + +D G++
Sbjct: 341 RDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREF 400
Query: 435 HASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
S + A ++ +I ++ +AG I A + + + W +++ A HG
Sbjct: 401 FLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHG 460
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLT 522
E + ER+L++ P++ T +L+
Sbjct: 461 NSEIGELVTERLLQM--DPENSTVYTLLS 487
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 173/357 (48%), Gaps = 37/357 (10%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
+P+ + + L + + +G VH R++ G+ + ++N+L++ YA+ + A K+
Sbjct: 143 TPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKL 202
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD M V+++ SW ++LS + GR+D A ++F MP RD+VSWT +I Y + RF+ A+
Sbjct: 203 FDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREAL 262
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
MF EM V +FT+ SV+ +C LG L G+ V ++ + G+ V N+L++MY
Sbjct: 263 EMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 322
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K G ++ A F M RD TW ++I
Sbjct: 323 SKCGS-------------------------------IERALDVFKDMHHRDKFTWTAIIL 351
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G + NGY EA+ MF M+ S PD+ T L+AC + + G++ + T
Sbjct: 352 GLAVNGYGEEAIEMFHRMIGVSE-TPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNI 410
Query: 311 ATGPVG-NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL----LDGYIKIGDI 362
A V +I + + G + A ++Q ++ + I T L + G +IG++
Sbjct: 411 APNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGEL 467
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/704 (34%), Positives = 372/704 (52%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQV 141
N++++ Y K A ++F+LMP R+ VSW ++ Y G +++F M +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +F T V SC+ G + GK+ H +K GL V N+L+ MY+ A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
V D + ++S ++ +S ++ G + D V WN++
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNL------------- 238
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
T S+L +NL L L Q+H+ ++R F+A ALI+
Sbjct: 239 ------------------TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K G V AQ R+FD +++ T
Sbjct: 281 MYGKCGKVLYAQ---------------------------------RVFDDTHAQNIFLNT 307
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ Y Q+ ++A+ LF M + PN YT + +L+ + L+ L G +H L+S
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS 367
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + + V NAL+ MY+K+G+I AR+ F+ + +R + V+W +MI + HGLG EA++
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEA 426
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+RM+ G P+ IT++GVL AC+H G VEQG Y+N + ++P H+ +V LL
Sbjct: 427 FDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
+AG+ ++A +F+ P+E DVVAW +LL+AC V +N LGK AE + P++SG Y
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVL 546
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+++ +WE A +R M GVKK G SW+ I+N+ HVF ED HP+ IY K
Sbjct: 547 LSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAK 606
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ +IK +G+ PD A HDV+E+ +E L +HSEKLA+A+GLI TPE + L + KN
Sbjct: 607 VKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKN 666
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+C+DCHSAIK I K+ R IV+RD+ RFHHF G CSC DYW
Sbjct: 667 VRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 196/420 (46%), Gaps = 43/420 (10%)
Query: 190 YAKVGDEMMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
Y ++G+ + A + R ++ N +++L++ AR FD M ER+VV+W +
Sbjct: 46 YLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M+ GY +G+DFE L +F +M +P++F +C+N +++ GKQ H ++
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ V N L+ Y+ G A ++++ + Y ++ F++ L GY++ G
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDD--LPYCDLSVFSSALSGYLECGAF----- 218
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
K+ +++ R E NN T + L + S+L
Sbjct: 219 --------------------------KEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ Q+H+ +R G + + ALI MY K G + A+RVF+ H Q T+++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTH-AQNIFLNTTIMD 311
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKI 546
A Q EEA+ LF +M + P+ T+ +L + L++QG + + +K+ ++
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+ ++V++ ++G +++A M D+V W +++S C H LG+ A E
Sbjct: 372 HVMVGN--ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH---GLGREALE 425
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 184/458 (40%), Gaps = 97/458 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK H +K GL F++N+L+ Y+ A +V D++P L +++ LS Y +
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +V N D V W + + +++R+F
Sbjct: 215 CGAFKEGLDVLRKTANEDFV-WNNLT--------YLSSLRLF------------------ 247
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ L DL+ +VHS +V+ G + V +L+NMY K G + A+ VFD +N
Sbjct: 248 ----SNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQN- 302
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+ +++ Y Q+ EAL +F+ M
Sbjct: 303 ------------------------------IFLNTTIMDAYFQDKSFEEALNLFSKM-DT 331
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ P+++T A L++ A L LK G +H ++++ + VGNAL++ YAK G +E
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+K SG+++ RD+V W M+ G +G
Sbjct: 392 ARKAF--SGMTF-------------------------------RDIVTWNTMISGCSHHG 418
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVS 450
L ++A+E F M+ G PN T +L S + ++ G ++ + +
Sbjct: 419 LGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY 478
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
++ + SKAG A + V+W +++ A
Sbjct: 479 TCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 42/277 (15%)
Query: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
N + +S L +++L NL + VH+R+++ G + V +L+N Y K +
Sbjct: 236 NNLTYLSSLRLFSNLRDLNLALQ-------VHSRMVRFGFNAEVEACGALINMYGKCGKV 288
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
YA++VFD+ + + TI+ AY +
Sbjct: 289 LYAQRVFDDTHAQNIFLNTTIMDAYFQD-------------------------------K 317
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
F+ A+ +F +M +V P ++T +L S L L G +H V+K+G V V N
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER---- 240
+L+NMYAK G A+ F GM +++ +WN ++S H G A FD+MI
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
+ +T+ ++ S G+ + L F ++K ++PD
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 32/242 (13%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L L CAN L++G+ IHA++I T + E A +I
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTN----------------QSSRAEDAYQI----- 72
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+L++ Y+K + AR++FD + +R+VV+W AM+ GY+ +G + + ++LF
Sbjct: 73 ---------NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLF 123
Query: 401 RSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
+SM G +PN + + + S+ ++ GKQ H L+ G S V N L+ MYS
Sbjct: 124 KSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSL 183
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
A RV + + + +V ++S + + G +E + + + +++TY+
Sbjct: 184 CSGNGEAIRVLDDLPYCDLSV-FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLS 242
Query: 520 VL 521
L
Sbjct: 243 SL 244
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/702 (34%), Positives = 386/702 (54%), Gaps = 71/702 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K G ++ A VF+ MPNRD +SW +I Y E G +R+F M++ V
Sbjct: 246 NALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVD 305
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+TSV+ +C LGD G+++H +V++T ++ NSL+ MY+ VG A+ V
Sbjct: 306 PDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETV 365
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F +R + RD+V+W +MI+GY +AL
Sbjct: 366 F--------------------------SRTEC-----RDLVSWTAMISGYENCLMPQKAL 394
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ M++ + PD+ T+A LSAC+ L L +G +H
Sbjct: 395 ETY-KMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLH--------------------- 432
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
++ +Q G+ +++A +L+D Y K I A IF S ++++V+WT+
Sbjct: 433 -----------EVAKQKGLVSYSIVA-NSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTS 480
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+++G N +A+ FR M+R KPN+ TL +LS + + +L GK+IHA ALR+G
Sbjct: 481 IILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTG 539
Query: 443 EASSLSVSNALITMYSKAGNINAA-RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ + NA++ MY + G + A ++ F++ H E SW ++ A+ G G A +L
Sbjct: 540 VSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDH---EVTSWNILLTGYAERGKGAHATEL 596
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+RM+E + P+ +T++ +L AC+ G+V +G Y+N MK + I P H+A +VDLLG
Sbjct: 597 FQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLG 656
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R+G L+EAY FI+ MP++PD WG+LL++CR+H +++LG++AAE + + + G Y
Sbjct: 657 RSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYIL 716
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY+ GKW+ A +RK M+ G+ G SWV+++ VH F D HPQ I
Sbjct: 717 LSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINAL 776
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + + ++KE G V S D+ E K + HSE+LAI FGLI++ + + KN
Sbjct: 777 LERFYKKMKEAG-VEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKN 835
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
L +C CH+ +KFI + V REI VRDA +FHHFK G+CSC D
Sbjct: 836 LYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 244/513 (47%), Gaps = 78/513 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +LS + + G L A VF M R+ SW ++ Y + G F A+ ++ M+ V
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +T VL +C + +L G+++H V++ G V+V N+L+ MY K GD A+ V
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M ++ SW N+MI+GY +NG E L
Sbjct: 265 FDKMPNRDRISW-------------------------------NAMISGYFENGVCLEGL 293
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M+K + PD T+ S ++AC L +LG+QIH Y++RTEF + N+LI
Sbjct: 294 RLFGMMIK-YPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPM 352
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+ VG +E A+ +F RD+V+WTA
Sbjct: 353 YSSVGLIEEAET---------------------------------VFSRTECRDLVSWTA 379
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ GYE + + A+E ++ M EG P+ T++ +LS S L +LD G +H A + G
Sbjct: 380 MISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKG 439
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S V+N+LI MY+K I+ A +F+ + VSWTS+I+ L + EA+ F
Sbjct: 440 LVSYSIVANSLIDMYAKCKCIDKALEIFHST-LEKNIVSWTSIILGLRINNRCFEALFFF 498
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM----VD 558
M+ +KP+ +T V VL+AC G + G+ + H ++ S M +D
Sbjct: 499 REMIR-RLKPNSVTLVCVLSACARIGALTCGKEIH-----AHALRTGVSFDGFMPNAILD 552
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ R G ++ A+ + ++ +V +W LL+
Sbjct: 553 MYVRCGRMEYAWK--QFFSVDHEVTSWNILLTG 583
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 201/432 (46%), Gaps = 68/432 (15%)
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
G +V+S+V + + + N+LL+M+ + G+ + A VF M +N+ SWNV+V
Sbjct: 125 GSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLV----- 179
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
GY++ G EAL ++ ML +KPD +T
Sbjct: 180 --------------------------GGYAKAGLFDEALDLYHRMLW-VGVKPDVYTFPC 212
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L C + L G++IH ++IR F++ V NALI+ Y K G
Sbjct: 213 VLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCG---------------- 256
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
D+ AR +FD + +RD ++W AM+ GY +NG+ + + LF M
Sbjct: 257 -----------------DVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMM 299
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
++ P+ T++++++ L G+QIH LR+ S+ N+LI MYS G I
Sbjct: 300 IKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLI 359
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A VF+ R + VSWT+MI + ++A++ ++ M GI PD IT VL+A
Sbjct: 360 EEAETVFSRTECR-DLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSA 418
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+ ++ G + + K + + S++D+ + + +A + LE ++V
Sbjct: 419 CSCLCNLDMGMNLHEVAKQKGLVSYSIVA-NSLIDMYAKCKCIDKALEIFHS-TLEKNIV 476
Query: 584 AWGSLLSACRVH 595
+W S++ R++
Sbjct: 477 SWTSIILGLRIN 488
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 17/296 (5%)
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+S+L++ LL +++ G++ A +F + R++ +W ++ GY + GL +A++L+
Sbjct: 136 MSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLY 195
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M+ G KP+ YT +L + +L G++IH +R G S + V NALITMY K
Sbjct: 196 HRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKC 255
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G++N AR VF+ + R + +SW +MI ++G+ E ++LF M++ + PD +T V
Sbjct: 256 GDVNTARLVFDKMPNR-DRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
+TAC G G++ + + + PS S++ + GL++EA
Sbjct: 315 ITACELLGDDRLGRQIHGYVLRT-EFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECR- 372
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE-----PDNS------GAYSALCNL 625
D+V+W +++S ++N + + A E ++E PD A S LCNL
Sbjct: 373 DLVSWTAMISG---YENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNL 425
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 37/230 (16%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
NSL++ YAK + I A ++F K + V
Sbjct: 448 NSLIDMYAKCKCIDKALEIFHSTLEKNI-------------------------------V 476
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SWT+II+ R A+ F EM++ ++ P T+ VL++C +G L+ GK++H+
Sbjct: 477 SWTSIILGLRINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHA 535
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
++TG+S + N++L+MY + G A F + V+SWN++++ + G+ A
Sbjct: 536 LRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHAT 594
Query: 232 AQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
F +M+E +V VT+ S++ S++G E L F +M S+ P+
Sbjct: 595 ELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPN 644
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 129/310 (41%), Gaps = 61/310 (19%)
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
G ++++ S SL + NAL++M+ + GN+ A VF + ++ SW ++ A
Sbjct: 125 GSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRME-KRNLFSWNVLVGGYA 183
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-------------------------- 524
+ GL +EA+ L+ RML +G+KPD T+ VL C
Sbjct: 184 KAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVD 243
Query: 525 ---------THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
G V + ++ M N +I + +M+ G+ E
Sbjct: 244 VVNALITMYVKCGDVNTARLVFDKMPNRDRIS-----WNAMISGYFENGVCLEGLRLFGM 298
Query: 576 M---PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE-PDNSGAYSALCNLYSSCGK 631
M P++PD++ S+++AC + + LG+ +L E + +++L +YSS G
Sbjct: 299 MIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGL 358
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
E+A + + + SW + + G E+ L PQ+ KM ++
Sbjct: 359 IEEAETV-----FSRTECRDLVSWTAM-----ISGYENCLMPQKALETYKM------MEA 402
Query: 692 MGFVPDTASV 701
G +PD ++
Sbjct: 403 EGIMPDEITI 412
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/753 (33%), Positives = 388/753 (51%), Gaps = 97/753 (12%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VH +I LH FL N L+ Y+ +F + +NT+++ +
Sbjct: 30 KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVN- 88
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
N + F + +F+ + + + FT VL
Sbjct: 89 ----------------------------NHL--FHETLDLFLSIRKHGLNLHGFTFPLVL 118
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+CT + G +HS VVK G + V SLL++Y+
Sbjct: 119 KACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG-------------------- 158
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SGRL+ A F+++ ER VVTW ++ +GY+ G EA+ +F M+ +
Sbjct: 159 -----------SGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMV-EM 206
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
++PD + + LSAC ++ L G+ I ++ E
Sbjct: 207 GVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEM----------------------- 243
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
QK N TTL++ Y K G + AR +FDS+ ++D+V W+ M+ GY N
Sbjct: 244 QK----------NSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSF 293
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
K+ +E F M++E KP+ +++ LS +SL +LD G+ + R ++L ++NA
Sbjct: 294 PKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
LI MY+K G + VF + ++ V + I LA++G + + +F + +LGI P
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D T++G+L C H GL++ G R++N + V+ +K T H+ MVDL GRAG+L +AY
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I +MP+ P+ + WG+LLS CR+ K+ L + ++L+ +EP N+G Y L N+YS G+W
Sbjct: 473 ICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRW 532
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
++AA +R M G+KK G+SW++++ VH F +D HP D IY K+ + +E++ M
Sbjct: 533 DEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
GFVP T V DVE++ KE++L HHSEKLA+AFGLIST +R++KNLRVC DCH +
Sbjct: 593 GFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVM 652
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+ REIVVRD RFH F G CSC DYW
Sbjct: 653 KLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 203/469 (43%), Gaps = 97/469 (20%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L++ ++ N +G +H+ ++KCG + V SL++ Y+ + ++ A KVF+E+P ++
Sbjct: 117 VLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERS 176
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ +W + S Y G+ + AI +F +MV+
Sbjct: 177 VVTWTALFSGYTTA-------------------------------GKHREAIDLFKKMVE 205
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V P + + VL++C +GDL +G+ + + + + V +L+N+YAK G
Sbjct: 206 MGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A++VFD M E+D+VTW++MI GY+ N +
Sbjct: 266 ARSVFDSMG-------------------------------EKDIVTWSTMIQGYASNSFP 294
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E + F ML++ +LKPD+F++ LS+CA+L L LG+ + I R EF + NA
Sbjct: 295 KEGIEFFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI YAK G + +F ++++D+V
Sbjct: 354 LIDMYAKCGA---------------------------------MARGFEVFKEMKEKDIV 380
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHAS 437
A + G +NG K + +F + G P+ T +L + G + +A
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+ ++ ++ ++ +AG ++ A R+ + R + W +++
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 13 LEFYAHLLQSNLK-SRNPFVGKLVHARII------KCGLHL--------SVFLKNSLMNF 57
+EF+ +LQ NLK + VG L + + G+ L ++F+ N+L++
Sbjct: 298 IEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDM 357
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN----LMPNRDSVSW 113
YAK +++ +VF EM K + N +S AK G + L+ VF L + D ++
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
Query: 114 TTIIVTYNEIGRFKNAIRMF 133
++ G ++ +R F
Sbjct: 418 LGLLCGCVHAGLIQDGLRFF 437
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/771 (33%), Positives = 409/771 (53%), Gaps = 113/771 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L+ ++ K +H I+K G S F + L++ Y K I+ A+K+FDEM
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEARKLFDEM- 61
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
PNR V+W ++I ++ G+ K AI ++
Sbjct: 62 ------------------------------PNRHIVTWNSMISSHVSRGKTKEAIELYSN 91
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+ + VLP +T +++ + + +G G+K H V G +V D
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGF---------------EVSD 136
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A + D ++ G++ AR FD+++++DVV + ++I GY+Q+
Sbjct: 137 GFVATGIVD---------------MYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQH 181
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL +F +M+ S +KP+++TLAS L +C NL L GK IH +++ ++
Sbjct: 182 GLDGEALEVFEDMV-GSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+L++ Y+K VE + ++F+SL
Sbjct: 241 QTSLLTMYSKCNMVE---------------------------------DSIKVFNSLAYA 267
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
V WT+ +VG QNG + A+ +FR M+R PN++TLS++L SSLA L+ G+QIH
Sbjct: 268 SHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIH 327
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A ++ G + V ALI +Y K GN+ AR VF+ + + VS +MI A AQ+G G
Sbjct: 328 AVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSL-TELDIVSINTMIYAYAQNGFG 386
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA++LFER+ +LG++P+ +T++ +L AC + GLVE+G + +++++N H I+ T H+
Sbjct: 387 HEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTC 446
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
M+DLLGRA +EA IE PDV+ W +LL+AC++H +++ + +K+L P +
Sbjct: 447 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 505
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G + L N+Y+S GKW++ ++ + + + +KKT SWV I +VH F D HP+
Sbjct: 506 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 565
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST-PENT 734
I + ++ +++ +G+ PDT VL D+EE+ K L +HSEKLAIAF L T +NT
Sbjct: 566 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 625
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLRVC D I+ RDA RFHHFK G+CSC+DYW
Sbjct: 626 AIRIFKNLRVCGD--------------YIIARDAKRFHHFKGGICSCKDYW 662
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/592 (38%), Positives = 336/592 (56%), Gaps = 30/592 (5%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
S L A F D N++I S + +L F + + +L PD FT A
Sbjct: 49 SDALHYALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAF 108
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ----- 338
L A AN L+ G Q+H+ R FDA VG LIS YA+ G A+++ ++
Sbjct: 109 ALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPN 168
Query: 339 ------------------------SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ N+ ++ +L GY K G++G ARR+F +
Sbjct: 169 VVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPL 228
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD V+W+ M+VG+ NG +A FR ++RE + N +L+ +LS + + + GK +
Sbjct: 229 RDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKIL 288
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H ++G SV+NALI YSK GN+ AR VF + + VSWTS+I LA HG
Sbjct: 289 HGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGC 348
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
GEEAIQLF M E G++PD IT++ +L AC+H GLVE+G ++ MKN++ I+P H+
Sbjct: 349 GEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYG 408
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDL GRA LQ+AY FI MP+ P+ + W +LL AC +H N+++ ++ +L ++PD
Sbjct: 409 CMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPD 468
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
NSG + L N+Y+ GKW+D ++IR++M +KKT G+S ++I ++ F + +
Sbjct: 469 NSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEV 528
Query: 675 RDAIYNKMAKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ + K+ +I ++ E G+ P SVLHD+EE+ KE + HSEKLA AFG+ P+
Sbjct: 529 TEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKG 588
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRI+KNLRVC DCH+ +K I K+ EI+VRD +RFH FK G CSCRDYW
Sbjct: 589 RILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 214/515 (41%), Gaps = 99/515 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +HA+I K GLH + L+ A T S +
Sbjct: 19 KQIHAQICKTGLHTDPLVFGKLLLHCAITISDA--------------------------- 51
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSV 151
L A +F+ PN D+ T+I + + +++ F+++ + L P FT
Sbjct: 52 --LHYALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFA 109
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L + L G ++HS + G + V +L++MYA+ GD A+ VFD M NV
Sbjct: 110 LKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNV 169
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ----------------- 254
+WN V++ G ++ A+ F M R++ +WN M+AGY++
Sbjct: 170 VTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLR 229
Query: 255 --------------NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
NG EA G F +L++ ++ ++ +L LSACA + GK +
Sbjct: 230 DEVSWSTMIVGFAHNGCFDEAFGFFRELLRE-EIRTNEVSLTGVLSACAQAGAFEFGKIL 288
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H ++ + F G V NALI Y+K G V +A+ + + ++
Sbjct: 289 HGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVA------------------ 330
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
R +V+WT+++ G +G ++A++LF M G +P+ T ++L
Sbjct: 331 --------------RSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLY 376
Query: 421 VSSSLASLDHGKQIHASALRS--GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
S ++ G + S +++ G ++ ++ +Y +A + A +
Sbjct: 377 ACSHSGLVEEGCGLF-SKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPN 435
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ W +++ A + HG E A + R+ E+ PD
Sbjct: 436 AIIWRTLLGACSIHGNIEMAELVKARLAEM--DPD 468
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/571 (39%), Positives = 355/571 (62%), Gaps = 32/571 (5%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQ 299
++ +N+++ +SQ+ + F N L ++ PD++T S L ACA L ++ G++
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ--------------------- 338
+H ++ + ++ V N+L+ Y KVG IAQK+ ++
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 339 --------SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
G+ N+++++T++ GY ++G++ AR++F+++ R+VV+W AM+ GY QN
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQN 268
Query: 391 GLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
DA+ELFR M EG PN+ TL ++LS + L +LD GK IH R+ L +
Sbjct: 269 EKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFL 328
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NAL MY+K G + A+ VF+ +H R + +SW+ +I+ LA +G EA F M+E G
Sbjct: 329 GNALADMYAKCGCVLEAKGVFHEMHER-DVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 387
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P+ I+++G+LTACTH GLV++G Y++MM V+ I P H+ +VDLL RAG L +A
Sbjct: 388 LEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQA 447
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ I +MP++P+V+ WG+LL CR++K+ + G+ ++L ++ ++SG+ L N+Y+S
Sbjct: 448 ESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASM 507
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+ +DAA+ R M+ KT G SW++I N V+ F + D HPQ IY+ + ++ ++
Sbjct: 508 GRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKM 567
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K G+ P T V+H+++E+ KE L HSEKLA+AFGLI+T E TT+RI+KNLRVCNDCH
Sbjct: 568 KVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCH 627
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
AIK I K+V+REIVVRD +RFHHFK G CS
Sbjct: 628 DAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 189/398 (47%), Gaps = 65/398 (16%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++T TSVL +C L + G+KVH FV K G + V NSL+++Y KVG +A+ +
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE----------------------- 239
FD M +++V SWN ++S + SG +D AR FD M+E
Sbjct: 185 FDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEAR 244
Query: 240 --------RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
R+VV+WN+MIAGY+QN +A+ +F M + L P+ TL S LSACA+L
Sbjct: 245 QLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHL 304
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
L LGK IH +I R + + +GNAL YAK G V +E G
Sbjct: 305 GALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCV------LEAKG----------- 347
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
+F + +RDV++W+ +++G G +A F M+ +G +PN
Sbjct: 348 ----------------VFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPN 391
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVF 470
+ + +L+ + +D G + + G + ++ + S+AG ++ A +
Sbjct: 392 DISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLI 451
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
N + + + W +++ + E ++ R+LEL
Sbjct: 452 NSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILEL 489
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 182/405 (44%), Gaps = 82/405 (20%)
Query: 4 PNPPSLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PN P+ P E+ + +L++ G+ VH + K G ++F++NSL++ Y K
Sbjct: 120 PNAPN---PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVG 176
Query: 63 SISYAKKVFDEMPVKTLCSWNTI-------------------------------LSAYAK 91
A+K+FDEM V+ + SWNT+ +S YA+
Sbjct: 177 CNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYAR 236
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTS 150
G L+ A ++F MP R+ VSW +I Y + ++ +AI +F +M + L P T+ S
Sbjct: 237 VGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVS 296
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C LG L GK +H F+ + + + + N+L +MYAK G + AK VF M ++
Sbjct: 297 VLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERD 356
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SW+++ I G + GY EA FA M++
Sbjct: 357 VISWSII-------------------------------IMGLAMYGYANEAFNFFAEMIE 385
Query: 271 DSSLKPDKFTLASTLSACAN-------LEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
D L+P+ + L+AC + LE + Q+ Y I + + G V + L
Sbjct: 386 D-GLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQV--YGITPKIEHYGCVVDLL---- 438
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
++ G ++ A+ ++ + NVI + LL G D R+
Sbjct: 439 SRAGRLDQAESLINSMPMQP-NVIVWGALLGGCRIYKDAERGERV 482
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
QI AS + S + + ++V I + S GN+ + +FN ++ +++ A +QH
Sbjct: 46 QIIASPIPSIDPNIIAVK--FIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQH 103
Query: 493 GLGEEAIQLFERMLEL--GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
I F L L PD T+ VL AC V +GQ+ + V K
Sbjct: 104 NAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCF---VTKYGCES 160
Query: 551 SHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
+ F S+VDL + G A + M + DVV+W +L+S +D ++ + +
Sbjct: 161 NLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR-DVVSWNTLISGYCFSGMVDKARMVFDGM 219
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+ N ++S + + Y+ G E+A + ++M
Sbjct: 220 M---EKNLVSWSTMISGYARVGNLEEARQLFENM 250
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/438 (46%), Positives = 298/438 (68%), Gaps = 3/438 (0%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T LLD Y+K+G + A ++F + D+D+VAW+AML GY Q G + A+++F + + G K
Sbjct: 36 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 95
Query: 410 PNNYTLSAMLSVSSSL-ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN +T S++L+V ++ AS+ GKQ H A++S SSL VS+AL+TMY+K GNI +A
Sbjct: 96 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 155
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF ++ VSW SMI AQHG +A+ +F+ M + +K D +T++GV ACTH G
Sbjct: 156 VFKR-QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 214
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LVE+G++Y+++M KI PT H + MVDL RAG L++A IENMP W ++
Sbjct: 215 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTI 274
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L+ACRVHK +LG++AAEK++ ++P++S AY L N+Y+ G W++ A +RK M VK
Sbjct: 275 LAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK 334
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G+SW++++NK + F D HP +D IY K+ + +K++G+ PDT+ VL D++++
Sbjct: 335 KEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDE 394
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE +L HSE+LAIAFGLI+TP+ + L I+KNLRVC DCH IK I K+ +REIVVRD+
Sbjct: 395 HKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDS 454
Query: 769 TRFHHFKK-GLCSCRDYW 785
RFHHF G+CSC D+W
Sbjct: 455 NRFHHFSSDGVCSCGDFW 472
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 130/257 (50%), Gaps = 34/257 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+L AY K G+++ A +VF+ + ++D V+W+ ++ Y + G + AI+MF E+ + +
Sbjct: 36 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 95
Query: 143 PTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT +S+L C A + GK+ H F +K+ L + V+++LL MYAK G+ A+
Sbjct: 96 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 155
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VF R K++ SWN SMI+GY+Q+G +A
Sbjct: 156 VFKRQREKDLVSWN-------------------------------SMISGYAQHGQAMKA 184
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-TEFDATGPVGNALI 320
L +F M K +K D T +AC + ++ G++ ++R + T + ++
Sbjct: 185 LDVFKEM-KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 243
Query: 321 SCYAKVGGVEIAQKIVE 337
Y++ G +E A K++E
Sbjct: 244 DLYSRAGQLEKAMKVIE 260
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 180/411 (43%), Gaps = 75/411 (18%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+FT + +L TAL +S + VH+ VVKT V +LL+ Y K+G A VF
Sbjct: 1 EFTYSVIL---TALPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
G+ K++ +W ++M+AGY+Q G A+ M
Sbjct: 57 GIDDKDIVAW-------------------------------SAMLAGYAQTGETEAAIKM 85
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLE-KLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F + K +KP++FT +S L+ CA + GKQ H + I++ D++ V +AL++ Y
Sbjct: 86 FGELTK-GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 144
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G +E A++ +F R++D+V+W +M
Sbjct: 145 AKKGNIESAEE---------------------------------VFKRQREKDLVSWNSM 171
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+ GY Q+G A+++F+ M + K + T + + + ++ G++ +R +
Sbjct: 172 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 231
Query: 444 ASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ N+ ++ +YS+AG + A +V + + W +++ A H E
Sbjct: 232 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 291
Query: 503 ERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
E++ + +KP D YV + G ++ + +M N +K P +
Sbjct: 292 EKI--IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLM-NERNVKKEPGY 339
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++HA +++ S +V AL+ Y K G + A +VF+ I ++ V+W++M+ AQ
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQT 76
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTH-GGLVEQGQRYYNMMKNVHKIKPTPS 551
G E AI++F + + GIKP+ T+ +L C + QG++++ ++ +
Sbjct: 77 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLC 135
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH----KNLDLGK 602
++++ + + G ++ A + E D+V+W S++S H K LD+ K
Sbjct: 136 VSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKALDVFK 189
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 37 ARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT-----LCSWNTILSAYAK 91
+ K G+ + F +S++N A T + K F +K+ LC + +L+ YAK
Sbjct: 87 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 146
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+G ++ A EVF +D VSW ++I Y + G+ A+ +F EM + +V T V
Sbjct: 147 KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV 206
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS-LLNMYAKVGDEMMAKAVFDGMRLKN 210
A+CT G + G+K +V+ NS ++++Y++ G A V + M
Sbjct: 207 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 266
Query: 211 VSS-WNVVVSLHIHSGRLDLARAQFDQMI 238
S+ W +++ + +L R +++I
Sbjct: 267 GSTIWRTILAACRVHKKTELGRLAAEKII 295
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK H IK L S+ + ++L+ YAK +I A++VF K L SWN+++S YA+
Sbjct: 118 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 177
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQF 146
G+ A +VF M R D V++ + G + + F MV+D ++ PT+
Sbjct: 178 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 237
Query: 147 TVTSVLASCTALGDLSAGKKV 167
+ ++ + G L KV
Sbjct: 238 HNSCMVDLYSRAGQLEKAMKV 258
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/590 (37%), Positives = 352/590 (59%), Gaps = 37/590 (6%)
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGR-LDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A A+ + +V S+N +V+ S R L ARA FD+M RD +W+++++ ++++G
Sbjct: 80 ALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQ 139
Query: 258 DFEALGMFANMLKD--SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
AL ++ ML++ S+ ++FT +S L+A + G+++H +++R DA
Sbjct: 140 PRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDA---- 195
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+ + ++ L D Y K G + AR +FD + R
Sbjct: 196 -----------------------------DAVVWSALADMYAKCGRVDDARSVFDRMPVR 226
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DVV+WTAM+ Y + + LF M+R G +PN +T + +L + S GKQ+H
Sbjct: 227 DVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVH 286
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+S S +AL+ MYSK G++ A RVF + + + VSWT+MI AQ+G
Sbjct: 287 GRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMP-KLDLVSWTAMISGYAQNGQP 345
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+EA++ F+ +L G +PDH+T+VGVL+AC H GLV++G ++ +K+ + I+ T H+A
Sbjct: 346 DEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYAC 405
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
++DLL R+GL + A I M ++P+ W SLL CR+HKN+ L + AAE L IEP+N
Sbjct: 406 VIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPEN 465
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
Y L N+Y+S G +++ N R+ M+ G+ K SW+++ ++HVF V D LHPQ
Sbjct: 466 PATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQA 525
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ +Y + K++ +++E G+V DT VLHDVE++ K+Q + +HSE+LA+AFG+I+TP+
Sbjct: 526 EQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAP 585
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++ KNLR+C DCH+ IK I K+V REI+VRD+ RFHHFK G CSCRDYW
Sbjct: 586 IKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 223/502 (44%), Gaps = 74/502 (14%)
Query: 47 SVFLKNSLMNFYAK-TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR-LDLACEVFNL 104
S L N +++ + ++ A + +P +CS+NT+++A + R L A +F+
Sbjct: 59 STLLSNRILHLLSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDR 118
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV---LPTQFTVTSVLASCTALGDL 161
MP RD SW+ I+ + G+ + A+ ++ M+++ + +FT +S LA+ TA
Sbjct: 119 MPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCA 178
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
AG+++H VV+ G+ V ++L +MYAK G A++VFD M +++V
Sbjct: 179 RAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDV---------- 228
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
V+W +M+ Y D E +F ML+ S ++P++FT
Sbjct: 229 ---------------------VSWTAMVERYFDARRDGEGFRLFVRMLR-SGIQPNEFTY 266
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
A L ACA KLGKQ+H + ++ + +AL+ Y+K G + A ++ G+
Sbjct: 267 AGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFR--GM 324
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
L+++++T ++ GY QNG +A+ F
Sbjct: 325 PKLDLVSWTAMISGY-------------------------------AQNGQPDEALRYFD 353
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRSGEASSLSVSNALITMYSKA 460
++R G +P++ T +LS + +D G I H+ G + +I + S++
Sbjct: 354 MLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRS 413
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH-ITYVG 519
G A + N + + W S++ H A E + E I+P++ TYV
Sbjct: 414 GLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFE--IEPENPATYVT 471
Query: 520 VLTACTHGGLVEQGQRYYNMMK 541
+ GL ++ + +M+
Sbjct: 472 LANIYASVGLFDEVENTRRIME 493
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
W+ + YAK GR+D A VF+ MP RD VSWT ++ Y + R R+FV M++ +
Sbjct: 200 WSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGI 259
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT VL +C GK+VH + K+ ++L++MY+K GD A
Sbjct: 260 QPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVR 319
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNSMIAGYSQNGY 257
VF GM ++ SW ++S + +G+ D A FD ++ D VT+ +++ + G
Sbjct: 320 VFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGL 379
Query: 258 DFEALGMF--------------------------------ANMLKDSSLKPDKFTLASTL 285
+ L +F M+ S+KP+KF AS L
Sbjct: 380 VDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLL 439
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGN-ALISCYAKVG---GVEIAQKIVEQSGI 341
C + ++L + + E + P L + YA VG VE ++I+E GI
Sbjct: 440 GGCRIHKNVRLARWAAEALF--EIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGI 497
Query: 342 SYL 344
+ +
Sbjct: 498 TKM 500
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 33/204 (16%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S I P EF YA +L++ + + +GK VH R+ K S F +++L++ Y+K +
Sbjct: 257 SGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGT 316
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
A +VF MP L SW ++S YA+ G+ D
Sbjct: 317 AVRVFRGMPKLDLVSWTAMISGYAQNGQPD------------------------------ 346
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNS 185
A+R F +++ P T VL++C G + G + HS + G+ +
Sbjct: 347 -EALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYAC 405
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLK 209
++++ ++ G A+ + + M +K
Sbjct: 406 VIDLLSRSGLFERAEEMINTMSVK 429
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/752 (34%), Positives = 398/752 (52%), Gaps = 82/752 (10%)
Query: 41 KCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV----KTLCSWNTILSAYAKQGRLD 96
K G+ +S++ L + S+S+ + + + M + ++ N +L Y + G L+
Sbjct: 74 KAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLE 133
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
A ++F+ M + ++VS TT+I Y E G A+ +F M++ P T++L S
Sbjct: 134 DADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLV 193
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
L G+++H+ V++ GL ++ ++NMY K G + AK VF
Sbjct: 194 NPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVF------------- 240
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
DQM + V W ++ GY+Q G +AL +F +++ + ++
Sbjct: 241 ------------------DQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEG-VEW 281
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D F + L ACA+LE+L+ GKQIHA + + + VG
Sbjct: 282 DSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVG-------------------- 321
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
T L+D YIK A R F +R+ + V+W+A++ GY Q ++A
Sbjct: 322 -------------TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 368
Query: 397 VELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
V+ F+S+ + N++T +++ S LA + G Q+HA A++ S +ALIT
Sbjct: 369 VKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 428
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK G ++ A VF + + V+WT+ I A +G EA++LFE+M+ G+KP+ +
Sbjct: 429 MYSKCGCLDDAHEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 487
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T++ VLTAC+H GLVEQG+ Y + M + + PT H+ M+D+ R+GLL EA F++N
Sbjct: 488 TFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKN 547
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EPD ++W LS C HKNL+LGKIA E+L ++P+++ Y NLY+ GKWE+A
Sbjct: 548 MPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEA 607
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
A + K M +KK SW+Q + K+H F V D HPQ IY K+ K +D GF+
Sbjct: 608 AEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKL-KEFD-----GFM 661
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN--TTLRIMKNLRVCNDCHSAIK 753
+ + +EQ+L HSE+LAIAFGLIS N +++ KNLR C DCH K
Sbjct: 662 --EGDMFQCSMTERREQLL-DHSERLAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAK 718
Query: 754 FICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + EIV+RD+ RFHHFK+G CSC DYW
Sbjct: 719 HVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 213/509 (41%), Gaps = 107/509 (21%)
Query: 1 METPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
+E+ + P P Y LL+S + R +G+ +HA +I+ GL + ++ ++N Y K
Sbjct: 174 LESGDKP----PSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVK 229
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ AK+VFD+M VK +W ++ V Y
Sbjct: 230 CGWLVGAKRVFDQMAVKKPVAWTGLM-------------------------------VGY 258
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
+ GR ++A+++FV+++ + V F + VL +C +L +L GK++H+ V K GL V
Sbjct: 259 TQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEV 318
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+V L++ Y K A F +R N SW+ ++S
Sbjct: 319 SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS--------------------- 357
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
GY Q EA+ F ++ +++ + FT S AC+ L +G Q+
Sbjct: 358 ----------GYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQV 407
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA I+ + +ALI+ Y+K G ++ A ++ E + +++A+T + G+ G
Sbjct: 408 HADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFE--SMDNPDIVAWTAFISGHAYYG 465
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
+ A R LF MV G KPN+ T A+L+
Sbjct: 466 NASEALR-------------------------------LFEKMVSCGMKPNSVTFIAVLT 494
Query: 421 VSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S ++ GK + LR A ++ + +I +Y+++G ++ A R + + +
Sbjct: 495 ACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDA 554
Query: 480 VSWTSMIVALAQHG-------LGEEAIQL 501
+SW + H GEE QL
Sbjct: 555 MSWKCFLSGCWTHKNLELGKIAGEELRQL 583
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
LV ++G +A E F+ M + G + Y+ + L SL HG+ +H E
Sbjct: 53 LVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIE 112
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
S+ + N ++ MY + G++ A ++F+ + VS T+MI A A+ GL ++A+ LF
Sbjct: 113 NPSVLLQNCVLQMYCECGSLEDADKLFDEMS-DLNAVSRTTMISAYAEQGLLDKAVGLFS 171
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS----MVDL 559
RMLE G KP Y +L + + ++ G++ + H I+ AS +V++
Sbjct: 172 RMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIH-----AHVIRAGLCSNASIETGIVNM 226
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
+ G L A + M ++ VAW L+
Sbjct: 227 YVKCGWLVGAKRVFDQMAVKKP-VAWTGLM 255
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/755 (34%), Positives = 398/755 (52%), Gaps = 108/755 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H I GL +F+ +L++ Y VK C
Sbjct: 29 GRAIHRHAIHAGLQADLFVSTALLDMY-----------------VKCAC----------- 60
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR--MFVEMVQDQVLPTQFTVT 149
L A +F MP RD V+W ++ Y G + +A+ + ++M ++ P T+
Sbjct: 61 ---LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLV 117
Query: 150 SVLASCTALGDLSAGKKVHSFVV----------KTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++L G L+ G VH++ + K+ L+ V + +LL+MYAK G + A
Sbjct: 118 ALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 177
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ VF D M R+ VTW+++I G+
Sbjct: 178 RRVF-------------------------------DAMPARNEVTWSALIGGFVLCSRMT 206
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+A +F ML ++AS L ACA+L+ L++G+Q+HA + ++ A GN+L
Sbjct: 207 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 266
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+S YA K G I A +FD + +D V+
Sbjct: 267 LSMYA---------------------------------KAGLIDQAIALFDEMAVKDTVS 293
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
++A++ GY QNG ++A +F+ M +P+ T+ +++ S LA+L HG+ H S +
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
G AS S+ NALI MY+K G I+ +R+VFN++ R + VSW +MI HGLG+EA
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHGLGKEAT 412
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF M LG PD +T++ +L+AC+H GLV +G+ ++++M + + + P H+ MVDL
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDL 472
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
L R G L EAY FI++MPL DV W +LL ACRV+KN+DLGK + + + P+ +G +
Sbjct: 473 LSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNF 532
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+YS+ G++++AA +R K G KK+ G SW++I +H F D HPQ IY
Sbjct: 533 VLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIY 592
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
++ I IK++G+ PDT+ VL D+EE+ KE+ L HSEKLAIA+G++S E+ T+ +
Sbjct: 593 RELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVT 652
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
KNLRVC DCH+ IK I + R I+VRDA RFHHF
Sbjct: 653 KNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 233/489 (47%), Gaps = 74/489 (15%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ +V P +T L +C+AL D G+ +H + GL + V+ +LL+MY K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F M +++ +W N+M+AGY+ +
Sbjct: 61 LPDAAHIFATMPARDLVAW-------------------------------NAMLAGYAHH 89
Query: 256 GYDFEALGMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G A+ +M ++ L+P+ TL + L A L G +HAY IR P
Sbjct: 90 GMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLH---P 146
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
N+ K+ + V+ T LLD Y K G + ARR+FD++
Sbjct: 147 NRNS-------------KSKLTD-------GVLLGTALLDMYAKCGSLLYARRVFDAMPA 186
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL---ASLDH- 430
R+ V W+A++ G+ A LF++M+ +G + S++S+L ASLDH
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHL 241
Query: 431 --GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+Q+HA +SG + L+ N+L++MY+KAG I+ A +F+ + + +TVS+++++
Sbjct: 242 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSG 300
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
Q+G EEA +F++M ++PD T V ++ AC+H ++ G+ + + + +
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLAS 359
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
S +++D+ + G + + MP D+V+W ++++ +H LGK A
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMP-SRDIVSWNTMIAGYGIH---GLGKEATA-- 413
Query: 609 LLIEPDNSG 617
L +E +N G
Sbjct: 414 LFLEMNNLG 422
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 63/260 (24%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA + K G+H + NSL++ YAK I A +FDEM VK S++ ++S Y
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ GR + A +F +M V P T+ S
Sbjct: 303 QNGRAE-------------------------------EAFLVFKKMQACNVEPDAATMVS 331
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+ L L G+ H V+ GL+ ++ N+L++MYAK G +++ VF+ M ++
Sbjct: 332 LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRD 391
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ S WN+MIAGY +G EA +F M
Sbjct: 392 IVS-------------------------------WNTMIAGYGIHGLGKEATALFLEM-N 419
Query: 271 DSSLKPDKFTLASTLSACAN 290
+ PD T LSAC++
Sbjct: 420 NLGFPPDGVTFICLLSACSH 439
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 357/649 (55%), Gaps = 72/649 (11%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PTQ T ++ SC LS G VH +V +G + L+NMY ++G
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGS------- 128
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+D AR FD+ ER + WN++ + G E L
Sbjct: 129 ------------------------IDRARKVFDETRERTIYVWNALFRALAMVGCGKELL 164
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACA----NLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
++ M + D+FT L AC ++ L+ GK+IHA+I+R ++A
Sbjct: 165 DLYVQM-NWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEA------- 216
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
N+ TTLLD Y K G + A +F ++ ++ V
Sbjct: 217 --------------------------NIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFV 250
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPK--PNNYTLSAMLSVSSSLASLDHGKQIHA 436
+W+AM+ + +N + A+ELF+ M+ E PN+ T+ +L + LA+L+ GK IH
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHG 310
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
LR G S L V NALITMY + G I +RVF+ + R + VSW S+I HG G+
Sbjct: 311 YILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNR-DVVSWNSLISIYGMHGFGK 369
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
+AIQ+FE M+ G P +I+++ VL AC+H GLVE+G+ + M + ++I P H+A M
Sbjct: 370 KAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 429
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLLGRA L EA IE+M EP WGSLL +CR+H N++L + A+ L +EP N+
Sbjct: 430 VDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNA 489
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L ++Y+ W +A ++ K ++ G++K G SW++++ KV+ F D +PQ +
Sbjct: 490 GNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIE 549
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I+ + K+ +E+K G+VP T VL+D++E+ KE+++ HSEKLA+AFGLI+T + T+
Sbjct: 550 EIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETI 609
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RI KNLR+C DCH+ KFI K +REI+VRD RFHHFK G+CSC DYW
Sbjct: 610 RIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 204/495 (41%), Gaps = 106/495 (21%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP + HL+ S + + G VH R++ G FL L+N Y + S
Sbjct: 74 PNPTQ-----RTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGS 128
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A+KV F+ R W + +
Sbjct: 129 IDRARKV-------------------------------FDETRERTIYVWNALFRALAMV 157
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT----ALGDLSAGKKVHSFVVKTGLSGC 179
G K + ++V+M + +FT T VL +C ++ L GK++H+ +++ G
Sbjct: 158 GCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEAN 217
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
++V +LL++YAK G A +VF M KN
Sbjct: 218 IHVMTTLLDVYAKFGSVSYANSVFCAMPTKNF---------------------------- 249
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFA-NMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
V+W++MIA +++N +AL +F ML+ P+ T+ + L ACA L L+ GK
Sbjct: 250 ---VSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGK 306
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
IH YI+R D+ PV NALI+ Y + G + + Q
Sbjct: 307 LIHGYILRRGLDSILPVLNALITMYGRCGEILMGQ------------------------- 341
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
R+FD++++RDVV+W +++ Y +G K A+++F +M+ +G P+ + +
Sbjct: 342 --------RVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITV 393
Query: 419 LSVSSSLASLDHGKQIHASALRSGEA-SSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
L S ++ GK + S L + ++ + +A ++ A ++ +H+
Sbjct: 394 LGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEP 453
Query: 478 ETVSWTSMIVALAQH 492
W S++ + H
Sbjct: 454 GPTVWGSLLGSCRIH 468
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 21/263 (7%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QV 141
T+L YAK G + A VF MP ++ VSW+ +I + + A+ +F M+ +
Sbjct: 223 TLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDS 282
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+P T+ +VL +C L L GK +H ++++ GL + V N+L+ MY + G+ +M +
Sbjct: 283 VPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQR 342
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNSMIAGYSQNGY 257
VFD M+ ++V SWN ++S++ G A F+ MI + +++ +++ S G
Sbjct: 343 VFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGL 402
Query: 258 DFEALGMFANMLKDSSLKP--DKFTLASTLSACANL--EKLKLGKQIHAYIIRTEFDATG 313
E +F +ML + P + + L AN E +KL + +H F+ G
Sbjct: 403 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMH-------FEP-G 454
Query: 314 PV--GNALISCYAKVGGVEIAQK 334
P G+ L SC VE+A++
Sbjct: 455 PTVWGSLLGSCRIHC-NVELAER 476
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P P T ++ + SL G +H + SG ++ LI MY + G+I+ AR
Sbjct: 74 PNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRAR 133
Query: 468 RVFNLIHWRQETVS-WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+VF+ R+ T+ W ++ ALA G G+E + L+ +M +GI D TY VL AC
Sbjct: 134 KVFD--ETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVV 191
Query: 527 GGL----VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
L +++G+ + + H + +++D+ + G + A + MP + +
Sbjct: 192 SELSVSPLQKGKEIHAHILR-HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NF 249
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS-ALCNLYSSCG 630
V+W +++ AC + + + +L+++E +S S + N+ +C
Sbjct: 250 VSWSAMI-ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACA 297
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/585 (37%), Positives = 345/585 (58%), Gaps = 39/585 (6%)
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD + + +V WN MI +N F+A+ ++ M+ + +P+K+T + L AC++
Sbjct: 94 FDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMV-AHFRPNKYTYPAVLKACSDAGV 152
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
+ G Q+HA++++ G + ++ I YA G + A++I++ G ++ + + ++
Sbjct: 153 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG-GEVDAVCWNAMI 211
Query: 354 DGYIKIGDIGPARRIF--------------------------------DSLRDRDVVAWT 381
DGY++ G++ AR +F D +++RD ++W+
Sbjct: 212 DGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWS 271
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY Q G +A+E+F M +E +P + L ++LS ++L +LD G+ IH A R+
Sbjct: 272 AMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN 331
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ +L+ MY+K G I+ A VF + +E SW +MI LA HG E+AI L
Sbjct: 332 SIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEVSSWNAMIGGLAMHGRAEDAIDL 390
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M I P+ IT+VGVL AC HGGLV++G +N M+ + ++P H+ +VDLLG
Sbjct: 391 FSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 447
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAGLL EA + ++P EP WG+LL ACR H N++LG+ + LL +EP NSG Y+
Sbjct: 448 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 507
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI-QNKVHVFGVEDWLHPQRDAIYN 680
L N+Y+ G+WE+ +RK MK G+K T G S + + + +VH F + D HPQ IY
Sbjct: 508 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQ 567
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ K+ + ++ G+ PD + VL D++E+ KE + HSEKLAI FGLI+T TT+RI+K
Sbjct: 568 MLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVK 627
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCHSA K I ++ +REI+VRD R+HHF+ G CSC+D+W
Sbjct: 628 NLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 150/585 (25%), Positives = 251/585 (42%), Gaps = 108/585 (18%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K HA I++ G ++ SL+ YA S N LS
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANV-------------------STNRYLS----- 86
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
+ + VF+ + + W +I E AI ++ EM+ P ++T +VL
Sbjct: 87 --FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVL 144
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA--------------------- 191
+C+ G ++ G +VH+ +VK GL G ++ +S + MYA
Sbjct: 145 KACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA 204
Query: 192 -----------KVGDEMMAKAVFDGMRLKN-VSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+ G+ A+ +F+GM ++ +S+WN ++S G +++AR FD+M E
Sbjct: 205 VCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKE 264
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD ++W++MI GY Q G EAL +F M K+ ++P KF L S LSACANL L G+
Sbjct: 265 RDEISWSAMIDGYIQEGCFMEALEIFHQMQKE-KIRPRKFVLPSVLSACANLGALDQGRW 323
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
IH Y R G +G +L+ YAK G +++A +
Sbjct: 324 IHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWE------------------------- 358
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
+F+ + +++V +W AM+ G +G +DA++LF M PN T +L
Sbjct: 359 --------VFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVL 407
Query: 420 SVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
+ + + G I S + G + ++ + +AG + A +V + I
Sbjct: 408 NACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPT 467
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQGQRYY 537
W +++ A +HG E ++ + +LEL +P + +L+ G E+
Sbjct: 468 PAVWGALLGACRKHGNVELGERVGKILLEL--EPQNSGRYTLLSNIYAKAGRWEEVGEVR 525
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+MK IK TP S++D LGR E + FI P V
Sbjct: 526 KLMKE-RGIKTTPG--TSIID-LGRG----EVHKFIIGDGSHPQV 562
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 184/361 (50%), Gaps = 12/361 (3%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARII--KCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
H+L S ++ F G+LV AR I G + N++++ Y + + A+++F+ M
Sbjct: 172 GHILSSAIRMYASF-GRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230
Query: 75 PVKTLCS-WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
P +++ S WN ++S +++ G +++A E F+ M RD +SW+ +I Y + G F A+ +F
Sbjct: 231 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 290
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+M ++++ P +F + SVL++C LG L G+ +H++ + + + SL++MYAK
Sbjct: 291 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 350
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM-IERDVVTWNSMIAGY 252
G +A VF+ M K VSSWN ++ GR + A F +M I + +T+ ++
Sbjct: 351 GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNAC 410
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+ G + L +F +M K+ ++P + L +++ + I + T
Sbjct: 411 AHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSI---PTEPT 467
Query: 313 GPVGNALISCYAKVGGVEIAQKIVE-QSGISYLNVIAFTTLLDGYIKIG---DIGPARRI 368
V AL+ K G VE+ +++ + + N +T L + Y K G ++G R++
Sbjct: 468 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKL 527
Query: 369 F 369
Sbjct: 528 M 528
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAG-----NINAARRVFNLIHWRQETVS 481
SL H KQ HA LR+G ++ +L+ Y+ + ++ RVF+ + +
Sbjct: 46 SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR-KPNVFL 104
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNMM 540
W MI ++ +AI L+ M+ +P+ TY VL AC+ G+V +G Q + +++
Sbjct: 105 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 164
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
K H + +S + + G L EA +++ E D V W +++ L
Sbjct: 165 K--HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDG-----YLRF 217
Query: 601 GKI-AAEKLLLIEPDNS--GAYSALCNLYSSCGKWEDAANIRKSMK 643
G++ AA +L PD S ++A+ + +S CG E A MK
Sbjct: 218 GEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMK 263
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/638 (36%), Positives = 357/638 (55%), Gaps = 69/638 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+ + C L G++VH+ +V G + + L+ MYA+ G A V DGM
Sbjct: 40 AAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP-- 97
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
ER+VV+W +MI+GYSQN EA +F ML
Sbjct: 98 -----------------------------ERNVVSWTAMISGYSQNERPAEAWDLFIMML 128
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLG--KQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+ + +P++FTLAS L++C + + KQ+HA+ I+ F+
Sbjct: 129 R-AGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFE----------------- 170
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
L++ ++LLD Y + +I ARR+FD L RDVV++T +L GY
Sbjct: 171 ----------------LHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGY 214
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+ GL+++A+ LFR + EG + N T S +L+ S L+S+D+GKQ+H LR +
Sbjct: 215 TRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFM 274
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
++ N+LI MYSK G + +RRVF+ + R VSW +M++ +HG+ E +QLF M +
Sbjct: 275 ALQNSLIDMYSKCGKLLYSRRVFDNMPER-SVVSWNAMLMGYGRHGMAYEVVQLFRFMCD 333
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+KPD +T + VL +HGGLV++G ++ + H+ ++DLLGR+G L+
Sbjct: 334 -KVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLE 392
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
+A I+ MP +P WGSLL ACRVH N+ +G+ A+KL IEP+N+G Y L N+Y+
Sbjct: 393 KALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYA 452
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ W+D +RK M V K G SW+ + +H F + HP+++ I K+ +I+
Sbjct: 453 AARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYA 512
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
IK GFVPD + VLHDV+++ KE+ML HSEKLAI FGL+STP + T+++MKNLR+C D
Sbjct: 513 AIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVD 572
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ KF+ K+ REI +RD RFH +G C+C DYW
Sbjct: 573 CHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 207/467 (44%), Gaps = 104/467 (22%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHAR++ G +++L L+ YA+ ++ A V D
Sbjct: 54 GRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDG------------------ 95
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
MP R+ VSWT +I Y++ R A +F+ M++ P +FT+ SV
Sbjct: 96 -------------MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASV 142
Query: 152 LASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
L SCT + K+VH+F +K + V +SLL+MYA+
Sbjct: 143 LTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYAR----------------- 185
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
S + AR FD + RDVV++ ++++GY++ G D EAL +F L
Sbjct: 186 --------------SENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLF-RQL 230
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ ++ ++ T + L+A + L + GKQ+H I+R E + N+LI
Sbjct: 231 YNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLI--------- 281
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
D Y K G + +RR+FD++ +R VV+W AML+GY +
Sbjct: 282 ------------------------DMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGR 317
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G+ + V+LFR M + KP++ TL A+L S +D G + ++ E S+L
Sbjct: 318 HGMAYEVVQLFRFMC-DKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVK--EQSTLLN 374
Query: 450 SN---ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ +I + ++G + A + + ++ W S++ A H
Sbjct: 375 TQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHA 421
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/734 (34%), Positives = 394/734 (53%), Gaps = 90/734 (12%)
Query: 84 TILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV---- 137
++ AY K G A +VF+ MP + D VSWT +I Y+ G A F M
Sbjct: 92 ALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRG 151
Query: 138 --QDQVLPTQFTVTSVLASCTALGD----LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
+ L S A+G L G VH VVK G ++ NS+++MY+
Sbjct: 152 WDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYS 211
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
D A VF+G+ ++ +RDVV+WNS+I+G
Sbjct: 212 ACKDVGGAWRVFNGIPIE-----------------------------QRDVVSWNSLISG 242
Query: 252 YSQNGYDFEALGMFANMLKD--SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
+ NG AL F +M+ + S+++P++ T+ + L +CA L ++ +H YI
Sbjct: 243 FXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI----- 297
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
++ + +A+ +V+ T LLD + + G++ AR IF
Sbjct: 298 -------------SSRHSSLLVAK-----------DVVVLTALLDMHARCGNLALAREIF 333
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP------KPNNYTLSAMLSVSS 423
D + ++VV W+AM+ GYEQ ++A+ LFR M+ EG KPN TL ++++ S
Sbjct: 334 DGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACS 393
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SW 482
L + IH A+ +G +++ALI M +K G+I R+VF+ + TV SW
Sbjct: 394 RLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSW 453
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+SMI A HG G+ A++LF M G +P+ ITY+ VL+AC+H GLVEQG+ +N M+
Sbjct: 454 SSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEK 513
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ + PT H+A +VDLLGRAG L EA+N I NMP++ D+ WGSLL+AC +H N LG+
Sbjct: 514 DYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGE 573
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
I +K+L ++ ++ G + L N+Y G+W+D +R ++ G++K G S+++I N+V
Sbjct: 574 IVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEV 633
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMG-FVPDTASVLHDVEEDVKEQMLRHHSEKL 721
+ F ED HP+ + IY ++ + + +++ +V +T + D + ++HSE+L
Sbjct: 634 YSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVEDGDIAGLIXRCKYHSERL 693
Query: 722 AIAFGLISTPENTT----------LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRF 771
AIAFGLI ++T +RI KNLRVC DCH+ K + K++DRE++VRDA RF
Sbjct: 694 AIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRF 753
Query: 772 HHFKKGLCSCRDYW 785
HHF+ G CSC DYW
Sbjct: 754 HHFRDGFCSCGDYW 767
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 202/479 (42%), Gaps = 103/479 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++K G +S L NS+++ Y+ + + A +VF+ +P++
Sbjct: 184 GSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE-------------- 229
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD---QVLPTQFTV 148
RD VSW ++I + G + A+R F +MV + V P + TV
Sbjct: 230 ---------------QRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTV 274
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L SC LG + VH ++ +SLL
Sbjct: 275 IALLKSCAELGCVETSSWVHEYISSR--------HSSLLVA------------------- 307
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K+V ++ +H G L LAR FD + ++VV W++MIAGY Q EAL +F M
Sbjct: 308 KDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQM 367
Query: 269 LKDSSL-----KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
L + ++ KP+ TL S ++AC+ L + IH Y + T D + +ALI
Sbjct: 368 LMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMC 427
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD--RDVVAWT 381
AK G DI R++F + + R VV+W+
Sbjct: 428 AKCG---------------------------------DIEHGRQVFSEMDESTRTVVSWS 454
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+M+ +G K A+ELF M G +PN T ++LS S ++ GK S +
Sbjct: 455 SMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKD 514
Query: 442 -GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGE 496
G + + L+ + +AG+++ A V + + + W S++ A HG LGE
Sbjct: 515 YGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGE 573
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 223/546 (40%), Gaps = 108/546 (19%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
+ ++D+ W ++I N + A+ F M V FT ++L +C AL L
Sbjct: 13 ISHKDTFHWNSLIAK-NATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
+VH+++ + GL+ +L++ Y K G A VFD M +V
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSV------------- 118
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML------KDSSLKPDK 278
DVV+W ++I+ YS NG EA F M D
Sbjct: 119 ----------------DVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDV 162
Query: 279 FTLASTLSACA---NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
+L + +SACA L+ G +H +++ F + +GN+++ Y+ V A ++
Sbjct: 163 VSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRV 222
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
I +V+++ +L+ G+ NG +
Sbjct: 223 FNGIPIEQRDVVSWNSLIS-------------------------------GFXLNGEAER 251
Query: 396 AVELFRSMVREGP---KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-- 450
A+ F MV EG +PN T+ A+L + L ++ +H S SSL V+
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYI--SSRHSSLLVAKD 309
Query: 451 ----NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
AL+ M+++ GN+ AR +F+ + + V W++MI Q EEA++LF +ML
Sbjct: 310 VVVLTALLDMHARCGNLALAREIFDGVEGKN-VVCWSAMIAGYEQGSCPEEALRLFRQML 368
Query: 507 ELG------IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK------IKPTPSHFA 554
G +KP+ +T V V+ AC+ G R +M +HK + +
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLG----ASRSASM---IHKYAVATGLDQDARIAS 421
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEP-DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
+++D+ + G ++ M VV+W S++ A +H GK A E L
Sbjct: 422 ALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGE---GKRALE---LFSE 475
Query: 614 DNSGAY 619
+G Y
Sbjct: 476 MRTGGY 481
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 44/275 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--- 139
+L +A+ G L LA E+F+ + ++ V W+ +I Y + + A+R+F +M+ +
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373
Query: 140 ---QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+V P T+ SV+A+C+ LG + +H + V TGL + ++L++M AK GD
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433
Query: 197 MMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
+ VF M + V SW+ ++ G A F +M E + +T+ S+++
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKP--------------------------------DK 278
S G + F +M KD + P D
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
S L+AC KLG+ + I+ + ++ G
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVG 588
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 114/279 (40%), Gaps = 58/279 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L+S + + L S S ++H + GL + ++L++ AK
Sbjct: 380 PNAVTLVSVIAACSRLGASRSAS-------MIHKYAVATGLDQDARIASALIDMCAKCGD 432
Query: 64 ISYAKKVFDEM--PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
I + ++VF EM +T+ SW++++ A
Sbjct: 433 IEHGRQVFSEMDESTRTVVSWSSMIGAEGIH----------------------------- 463
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCV 180
G K A+ +F EM P + T SVL++C+ G + GK + + K G+S
Sbjct: 464 --GEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTG 521
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSW-NVVVSLHIHSGRLDLARAQFDQMI 238
L+++ + G A V M +K +++ W +++ + H+H + +++
Sbjct: 522 KHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLH------GNCKLGEIV 575
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
E+ +++ +S G+ + ANM +D+ D
Sbjct: 576 EKKILSLDSNSVGHHV---------LLANMYEDAGRWDD 605
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/587 (37%), Positives = 352/587 (59%), Gaps = 10/587 (1%)
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A +FD V + + ++S+ I+ LD A F Q+ ++ +NS I G+S + D
Sbjct: 41 AHTIFD------VFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSK-D 93
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
+ F K + L PD T + AC L +G Q H IIR FD+ V N+
Sbjct: 94 PDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNS 153
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L++ Y+ +G ++ A + + IS L+V+++T+++ GYIK GD+ AR++FD + ++++V
Sbjct: 154 LVTMYSTLGDIKSASYVFRR--ISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W+ M+ GY +N A+EL+ + EG N + ++++ + L +L+ G++ H
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYI 271
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
LR+ +L + AL+ MY++ G+I+ A VF+ + R + +SWT++I A HG E+A
Sbjct: 272 LRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGR-DALSWTTLIAGFAMHGYAEKA 330
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
++ F RM + G+ P IT+ VL+AC+HGGLVE+G + MK ++I+P H+ MVD
Sbjct: 331 LEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVD 390
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LLGRAG L EA F+ MP++P+ WG+LL ACR+HKN ++ + A + L+ ++P++SG
Sbjct: 391 LLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGY 450
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N+Y+ KWE+ NIR+ MK GV K G++ ++ KVH F + D HP+ I
Sbjct: 451 YVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQI 510
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+I +I+ G+ + L D++E+ KE + HSEKLAIA+ ++ T + +RI
Sbjct: 511 ERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRI 570
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLRVC DCH+A K I K+ +RE++VRD RFHHFK G CSC DYW
Sbjct: 571 VKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 236/505 (46%), Gaps = 42/505 (8%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEM----PVKTLCSWNTILSAYAKQGRLDLACEVFNLM 105
LKN ++F ++S+ K + + + + + + ++S + LD A +VF +
Sbjct: 14 LKNPKLSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQI 73
Query: 106 PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGK 165
N + + + I ++ + +V+ ++ ++P T ++ +CT G L G
Sbjct: 74 QNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGI 133
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
+ H +++ G V V NSL+ MY+ +GD A VF + +V SW +V+ +I SG
Sbjct: 134 QAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSG 193
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
+ AR FD+M E+++VTW+ MI+GY++N + +A+ ++ +L+ + ++ + S +
Sbjct: 194 DVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYF-LLQSEGVHANETVMVSVI 252
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
++CA+L L+LG++ H YI+R + +G AL+ YA+ G ++
Sbjct: 253 ASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSID--------------- 297
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
A +FD L RD ++WT ++ G+ +G + A+E F M +
Sbjct: 298 ------------------KAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEK 339
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNIN 464
G P T +A+LS S ++ G ++ S R L ++ + +AG +
Sbjct: 340 AGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLA 399
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
A + N + + W +++ A H E A + + ++EL KP+H Y +L+
Sbjct: 400 EAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIEL--KPEHSGYYVLLSNI 457
Query: 525 -THGGLVEQGQRYYNMMKNVHKIKP 548
E + MMK +KP
Sbjct: 458 YARTNKWENVENIRQMMKERGVVKP 482
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 139/275 (50%), Gaps = 32/275 (11%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L+++ + + +G H +II+ G V+++NSL+ Y+ I A VF +
Sbjct: 116 YPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRIS 175
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ SW ++++ Y K G + A ++F+ MP ++ V+W+ +I Y + F AI ++
Sbjct: 176 CLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFL 235
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ + V + + SV+ASC LG L G++ H ++++ ++ + + +L++MYA+ G
Sbjct: 236 LQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGS 295
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+D A FDQ+ RD ++W ++IAG++ +
Sbjct: 296 -------------------------------IDKAIWVFDQLPGRDALSWTTLIAGFAMH 324
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
GY +AL F+ M K + L P + T + LSAC++
Sbjct: 325 GYAEKALEYFSRMEK-AGLTPREITFTAVLSACSH 358
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
LS S +L H K IHA +R+ + ++ LI++ ++ A +VF I
Sbjct: 19 LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQ-NPN 77
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
+ S I + +++ + + G+ PD++TY ++ ACT G ++ G + +
Sbjct: 78 LFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHG 137
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ H S+V + G ++ A + DVV+W S+++
Sbjct: 138 QIIR-HGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISC-LDVVSWTSMVAG 188
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/588 (38%), Positives = 356/588 (60%), Gaps = 35/588 (5%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ A +VF+ +P+ D + I Y+ + A+R FV M Q+ V FT+ + S
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C +L + GK+VHS V++ G V N+L+N YAK+ D A+ +FDG+ +K+ ++
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N ++S + SG + AR FD+M +R +V+WN+MI+ Y+QNG D+ + ++D
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNG-DYHKGWIIFQRMQDEMC 224
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+P++ TLA+ LS CA L L++G +I + + +G+
Sbjct: 225 EPNEITLATVLSICAKLGDLEMGLRI------KKLNDNKNLGS----------------- 261
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
N+I T +L+ Y+K G + R +FD + RDVV W+AM+ GY QNG +
Sbjct: 262 ----------NMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSN 311
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A+ELF +M KPN+ TL ++LS + L S++ G++I + G S++ V++AL+
Sbjct: 312 EALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALL 371
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MYSK GNI AR++F+ + R + V+W SMI+ LA +G E+AI L+ RM E+ +KP++
Sbjct: 372 GMYSKCGNIIKARQIFDKLPQR-DNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNN 430
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
IT+VG++TACTH G VE G ++ M++ H I P HFA +VDL R+G L +AY FI
Sbjct: 431 ITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFIC 490
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
M +EP+VV WG+LLSA R+H N++L ++A +KLL +EPDNSG Y L N+Y+S G+W++
Sbjct: 491 RMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQE 550
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
A +RK MK V+K +SWV+++++VH F V D HP+ D +Y+ +
Sbjct: 551 ALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTI 598
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 246/515 (47%), Gaps = 71/515 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK VH+ +I+ G H SVF +N+L+NFYAK + A+ +FD + VK ++N ++SAY+
Sbjct: 114 VGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYS 173
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + A E+F+ M +R VSW +I Y + G + +F M + P + T+ +
Sbjct: 174 RSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLAT 233
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL+ C LGDL G ++ L + V+ ++L MY K G + VFD M ++
Sbjct: 234 VLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRD 293
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V +W ++MIAGY+QNG EAL +F NM K
Sbjct: 294 VVTW-------------------------------SAMIAGYAQNGRSNEALELFENM-K 321
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ +KP+ TL S LSACA L ++ G++I +Y+ ++ G + N ++
Sbjct: 322 SAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV-----ESRGLISNVYVA--------- 367
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+ LL Y K G+I AR+IFD L RD V W +M++G N
Sbjct: 368 -------------------SALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAIN 408
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G +DA+ L+ M KPNN T +++ + ++ G + S +RS S ++
Sbjct: 409 GFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRS-MRSDHNISPNIE 467
Query: 451 N--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ ++ ++ ++G + A + V W +++ A H E A +++LEL
Sbjct: 468 HFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLEL 527
Query: 509 GIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKN 542
+PD+ YV + G ++ + +MK+
Sbjct: 528 --EPDNSGNYVILSNIYASAGRWQEALKVRKLMKD 560
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 204/369 (55%), Gaps = 8/369 (2%)
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
+++ + AR FDQ+ D S I YS+ + EAL F +M +++ ++ FT+
Sbjct: 41 LNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNN-VRIVCFTI 99
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+CA+L + +GKQ+H+ +IR F ++ NALI+ YAK+ + A+ I + GI
Sbjct: 100 PPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFD--GI 157
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
+ IA+ L+ Y + G++ AR +FD +RDR +V+W AM+ Y QNG +F+
Sbjct: 158 LVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQ 217
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M E +PN TL+ +LS+ + L L+ G +I S++ VS A++ MY K G
Sbjct: 218 RMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCG 277
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
++ R VF+ + R++ V+W++MI AQ+G EA++LFE M IKP+ +T V VL
Sbjct: 278 AVDDGRLVFDHMA-RRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVL 336
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS-MVDLLGRAGLLQEAYNFIENMPLEP 580
+AC G VE G+R + +++ I + AS ++ + + G + +A + +P +
Sbjct: 337 SACAQLGSVETGERIGSYVESRGLISNV--YVASALLGMYSKCGNIIKARQIFDKLP-QR 393
Query: 581 DVVAWGSLL 589
D V W S++
Sbjct: 394 DNVTWNSMI 402
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L+S L A L R +G V +R GL +V++ ++L+ Y+K +
Sbjct: 327 PNDVTLVSVLSACAQLGSVETGER---IGSYVESR----GLISNVYVASALLGMYSKCGN 379
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM------PNRDSVSWTTII 117
I A+++FD++P + +WN+++ A G + A ++N M PN ++++ ++
Sbjct: 380 IIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPN--NITFVGLM 437
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQ 140
G + + F M D
Sbjct: 438 TACTHAGHVELGLEFFRSMRSDH 460
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/756 (32%), Positives = 400/756 (52%), Gaps = 99/756 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM-PVKTLCSWNTILSAYA 90
G++V + + G V + SL++ +AK + A+ VF M ++ + S ++ AY
Sbjct: 87 GRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYV 146
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G+ DLA + + W +M + P FT +
Sbjct: 147 RHGKNDLALDTY----------W---------------------KMRSQGLEPDAFTYAA 175
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C++ L GK +H ++++ G ++V N+L+ MYAK G +K++F M +K+
Sbjct: 176 ILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKD 235
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SW N+MIA Y+ G+D +A +F M
Sbjct: 236 VVSW-------------------------------NAMIAAYTLYGHDKDAFSLFHRMCT 264
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
PD +T +S L ACA+ ++L+ G+ +H I FD + N LIS + + G +E
Sbjct: 265 LGH-TPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLE 323
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
ARR F S+ +++ AW ML Y Q
Sbjct: 324 ---------------------------------SARRYFYSIEKKELGAWNTMLAAYAQF 350
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
KDA+ L+++M+ EG P+ +T S+++ +SL +L GK IH + G + +
Sbjct: 351 DKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILG 410
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
AL+ MY+K G++ A++ F+ I ++ VSW++MI A AQHG EEA++L M GI
Sbjct: 411 TALVNMYAKCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGI 469
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+ +T VL AC+HGG + +G Y+ + I+ + +DLLGRAG L+EA
Sbjct: 470 AQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAE 529
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+ + MP + VA +LL C+VH ++ GK ++++ +EP+N G+Y L N+Y++ G
Sbjct: 530 HVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAG 589
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+W+D A +R+ M+ GVK+ G S ++ ++K++ F V D +P+ I ++ +++ +K
Sbjct: 590 RWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMK 649
Query: 691 -EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
E G+VPDT V HDV +D KE++L+ HSEK+A+ FGLI++P +TLRI+KNLRVC+DCH
Sbjct: 650 EEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCH 709
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K K+ R I+VRD TRFHHF+ G+CSC DYW
Sbjct: 710 TVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 250/520 (48%), Gaps = 81/520 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N I+ Y K + A +VF+ + R++ SW+ ++ Y + ++ A+ ++ EMV+ ++
Sbjct: 6 NMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEIS 65
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+T++SVLA+CT L D+ G+ V + G V V SL++++AK G A++V
Sbjct: 66 IDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESV 125
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M G + RD+++ +MI Y ++G + AL
Sbjct: 126 FRSM------------------GAM------------RDIISVTAMIGAYVRHGKNDLAL 155
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ M + L+PD FT A+ L AC++ + L GK IH +I+ ++ V NALI+
Sbjct: 156 DTYWKM-RSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITM 214
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G ++ ++ +F ++ +DVV+W A
Sbjct: 215 YAKCGSLK---------------------------------DSKSLFLTMDVKDVVSWNA 241
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y G +KDA LF M G P+ YT S++L +S L+ G+ +H G
Sbjct: 242 MIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARG 301
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ N LI+M+++ G++ +ARR F I ++E +W +M+ A AQ G++A+ L+
Sbjct: 302 FDRDFAMQNNLISMFTRCGSLESARRYFYSIE-KKELGAWNTMLAAYAQFDKGKDALFLY 360
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF-------AS 555
+ ML G PD T+ V+ +C G + +G K +H+ T F +
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREG-------KFIHEC-STSCGFEKDVILGTA 412
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+V++ + G L +A + + DVV+W ++++A H
Sbjct: 413 LVNMYAKCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQH 451
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++N +I MY K + AR+VF+ I R SW+ ++ Q+ + +EA+++++ M+
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRN-AFSWSILVECYVQNAMYQEALEVYKEMVRK 62
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
I D T VL ACT VE+G+ + + K S++ L + G L+E
Sbjct: 63 EISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVA-TSLIHLFAKCGCLEE 121
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG-----KIAAEKLLLIEPDNSGAYSALC 623
A + +M D+++ +++ A H DL K+ ++ L EPD + Y+A+
Sbjct: 122 AESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGL---EPD-AFTYAAIL 177
Query: 624 NLYSSCGKWEDAANIRK 640
SS D +I K
Sbjct: 178 GACSSPDFLLDGKHIHK 194
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/737 (32%), Positives = 388/737 (52%), Gaps = 47/737 (6%)
Query: 61 TESISYAKKVFDEMPVKTLCSWN------TILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
T+ + K+ +K WN ++S+Y G A VF + R+ + W
Sbjct: 432 TDEQEHGIKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWN 491
Query: 115 TIIVTY-NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+ + + + G + +F E+ V+ + L +CT + D+ G ++H ++K
Sbjct: 492 SFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIK 551
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
G V + +L+N Y + A VF M WN + L++ S +L
Sbjct: 552 RGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVEL 611
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLE 292
F +M + S LK + T+ L A + L
Sbjct: 612 FRKM--------------------------------QFSFLKAETATIVRVLQASISELG 639
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
L +GK+ H Y++R FD VG +LI Y K + AQ + + + N+ A+ +L
Sbjct: 640 FLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN--MKNRNIFAWNSL 697
Query: 353 LDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
+ GY G A R+ + + D+V W M+ GY G K+A+ F M +EG
Sbjct: 698 VSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGV 757
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN+ +++ +L +SL+ L GK+IH ++R+G + V+ ALI MYSK+ ++ A +
Sbjct: 758 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 817
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF I + SW MI+ A GLG+EAI +F M ++G+ PD IT+ +L+AC + G
Sbjct: 818 VFRRIQ-NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 876
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L+ +G +Y++ M ++I P H+ MVDLLGRAG L EA++ I MPL+PD WG+L
Sbjct: 877 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 936
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
L +CR+HKNL + AA+ L +EP+NS Y + NLYS +WED ++R+ M GV+
Sbjct: 937 LGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 996
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
Q +SW+QI +VHVF ++ HP IY ++ ++ E+K++G+VPD V +++E
Sbjct: 997 NRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEV 1056
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
K+++L H+EKLAI +GLI +R++KN R+C+DCHSA K+I + RE+ +RD
Sbjct: 1057 EKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDG 1116
Query: 769 TRFHHFKKGLCSCRDYW 785
RFHHF++G CSC D+W
Sbjct: 1117 VRFHHFREGKCSCNDFW 1133
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 221/485 (45%), Gaps = 71/485 (14%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDE 73
E Y+ L++ + + ++G +H +IK G L V+L+ +LMNFY + + A +VF E
Sbjct: 524 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHE 583
Query: 74 MPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
M PN +++ W I+ + + + + +F
Sbjct: 584 M-------------------------------PNPEALLWNEAIILNLQSEKLQKGVELF 612
Query: 134 VEMVQDQVLPTQFTVTSVL-ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
+M + T+ VL AS + LG L+ GK+ H +V++ G V V SL++MY K
Sbjct: 613 RKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK 672
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSM 248
A+AVFD M+ +N+ +WN +VS + G + A +QM I+ D+VTWN M
Sbjct: 673 NHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGM 732
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I+GY+ G EAL FA M ++ + P+ ++ L ACA+L L+ GK+IH IR
Sbjct: 733 ISGYAMWGCGKEALAFFAQMQQEGVM-PNSASITCLLRACASLSLLQKGKEIHCLSIRNG 791
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
F V ALI Y+K ++ A K +
Sbjct: 792 FIEDVFVATALIDMYSKSSSLKNAHK---------------------------------V 818
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F ++++ + +W M++G+ GL K+A+ +F M + G P+ T +A+LS + +
Sbjct: 819 FRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLI 878
Query: 429 DHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G + S + L ++ + +AG ++ A + + + + + W +++
Sbjct: 879 GEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLG 938
Query: 488 ALAQH 492
+ H
Sbjct: 939 SCRIH 943
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/585 (37%), Positives = 345/585 (58%), Gaps = 39/585 (6%)
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD + + +V WN MI +N F+A+ ++ M+ S +P+K+T + L AC++
Sbjct: 95 FDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHS-RPNKYTYPAVLKACSDSGV 153
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
+ G Q+HA++++ G + ++ I YA G + A++I++ G ++ + + ++
Sbjct: 154 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG-GEVDAVCWNAMI 212
Query: 354 DGYIKIGDIGPARRIF--------------------------------DSLRDRDVVAWT 381
DGY++ G++ AR +F D +++RD ++W+
Sbjct: 213 DGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWS 272
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY Q G +A+E+F M +E +P + L ++LS ++L +LD G+ IH A R+
Sbjct: 273 AMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN 332
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ +L+ MY+K G I+ A VF + +E SW +MI LA HG E+AI L
Sbjct: 333 SIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS-NKEVSSWNAMIGGLAMHGRAEDAIDL 391
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M I P+ IT+VGVL AC HGGLV++G +N M+ + ++P H+ +VDLLG
Sbjct: 392 FSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 448
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAGLL EA + ++P EP WG+LL ACR H N++LG+ + LL +EP NSG Y+
Sbjct: 449 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 508
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI-QNKVHVFGVEDWLHPQRDAIYN 680
L N+Y+ G+WE+ +RK MK G+K T G S + + + +VH F + D HPQ IY
Sbjct: 509 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQ 568
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ K+ + ++ G+ PD + VL D++E+ KE + HSEKLAI FGLI+T TT+RI+K
Sbjct: 569 MLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVK 628
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCHSA K I ++ +REI+VRD R+HHF+ G CSC+D+W
Sbjct: 629 NLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 151/585 (25%), Positives = 251/585 (42%), Gaps = 108/585 (18%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K HA I++ G ++ SL+ YA S N LS
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANV-------------------STNRYLS----- 87
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
+ + VF+ + + W +I E AI ++ EMV P ++T +VL
Sbjct: 88 --FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVL 145
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA--------------------- 191
+C+ G ++ G +VH+ +VK GL G ++ +S + MYA
Sbjct: 146 KACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA 205
Query: 192 -----------KVGDEMMAKAVFDGMRLKN-VSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+ G+ A+ +F+GM ++ +S+WN ++S G +++AR FD+M E
Sbjct: 206 VCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKE 265
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD ++W++MI GY Q G EAL +F M K+ ++P KF L S LSACANL L G+
Sbjct: 266 RDEISWSAMIDGYIQEGCFMEALEIFHQMQKE-KIRPRKFVLPSVLSACANLGALDQGRW 324
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
IH Y R G +G +L+ YAK G +++A +
Sbjct: 325 IHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWE------------------------- 359
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
+F+ + +++V +W AM+ G +G +DA++LF M PN T +L
Sbjct: 360 --------VFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVL 408
Query: 420 SVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
+ + + G I S + G + ++ + +AG + A +V + I
Sbjct: 409 NACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPT 468
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQGQRYY 537
W +++ A +HG E ++ + +LEL +P + +L+ G E+
Sbjct: 469 PAVWGALLGACRKHGNVELGERVGKILLEL--EPQNSGRYTLLSNIYAKAGRWEEVGEVR 526
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+MK IK TP S++D LGR E + FI P V
Sbjct: 527 KLMKE-RGIKTTPG--TSIID-LGRG----EVHKFIIGDGSHPQV 563
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 184/361 (50%), Gaps = 12/361 (3%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARII--KCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
H+L S ++ F G+LV AR I G + N++++ Y + + A+++F+ M
Sbjct: 173 GHILSSAIRMYASF-GRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231
Query: 75 PVKTLCS-WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
P +++ S WN ++S +++ G +++A E F+ M RD +SW+ +I Y + G F A+ +F
Sbjct: 232 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 291
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+M ++++ P +F + SVL++C LG L G+ +H++ + + + SL++MYAK
Sbjct: 292 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 351
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM-IERDVVTWNSMIAGY 252
G +A VF+ M K VSSWN ++ GR + A F +M I + +T+ ++
Sbjct: 352 GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEITFVGVLNAC 411
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+ G + L +F +M K+ ++P + L +++ + I + T
Sbjct: 412 AHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSI---PTEPT 468
Query: 313 GPVGNALISCYAKVGGVEIAQKIVE-QSGISYLNVIAFTTLLDGYIKIG---DIGPARRI 368
V AL+ K G VE+ +++ + + N +T L + Y K G ++G R++
Sbjct: 469 PAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKL 528
Query: 369 F 369
Sbjct: 529 M 529
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 17/226 (7%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAG-----NINAARRVFNLIHWRQETVS 481
SL H KQ HA LR+G ++ +L+ Y+ + ++ RVF+ + +
Sbjct: 47 SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR-KPNVFL 105
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNMM 540
W MI ++ +AI L+ M+ +P+ TY VL AC+ G+V +G Q + +++
Sbjct: 106 WNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLV 165
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
K H + +S + + G L EA +++ E D V W +++ L
Sbjct: 166 K--HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDG-----YLRF 218
Query: 601 GKI-AAEKLLLIEPDNS--GAYSALCNLYSSCGKWEDAANIRKSMK 643
G++ AA +L PD S ++A+ + +S CG E A MK
Sbjct: 219 GEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMK 264
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/652 (35%), Positives = 358/652 (54%), Gaps = 73/652 (11%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ + P FT ++ +C+ L G ++H VVK G V ++NSL+ MY K
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCD- 59
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +L+R FD+M +++ V+W+++I Q+
Sbjct: 60 ------------------------------KYELSRQVFDEMPDKNAVSWSAIIGACLQD 89
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
E +F ML + S +P + + L+A A + + ++ ++ D V
Sbjct: 90 DRCKEGFSLFRQMLSEGS-RPSR---GAILNAMACVRSHEEADDVYRVVVENGLDFDQSV 145
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+A +A+ G VE+A R++FD + +
Sbjct: 146 QSAAAGMFARCGRVEVA---------------------------------RKLFDGIMSK 172
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V W + Y + + +A+ L + M+ +G P+ TL ++ S+LAS +H
Sbjct: 173 DLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVH 232
Query: 436 ASALRSGEASS--LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ +G + L+V ALI +Y K G++ AR+VF+ + R ++W++MI HG
Sbjct: 233 G-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERN-IITWSAMISGYGMHG 290
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
G EA+ LF++M + +KPDHIT+V +L+AC+H GLV +G +N M + P P H+
Sbjct: 291 WGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHY 349
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
A MVD+LGRAG L EA +FIE MP+ P+ WG+LL ACR+H N+DL ++ A L ++P
Sbjct: 350 ACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDP 409
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
N+G Y L N+Y+ GK ++A +IR MK GVKK G+S ++I+NK++ F D HP
Sbjct: 410 HNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHP 469
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
Q D IY+++ ++ D I++ G+ PD VLHDV+E+ KE ML HSEKLAI FGL++
Sbjct: 470 QTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPG 529
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +RI KNLRVC DCH+A KFI K+ REIVVRDA RFHHFK G CSCRDYW
Sbjct: 530 SVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 203/515 (39%), Gaps = 107/515 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H ++K G VF+ NSL+ Y K + +++VFDEMP K SW+ I+ A +
Sbjct: 29 GIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQ 88
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R K +F +M+ + P++ + +
Sbjct: 89 DDRC-------------------------------KEGFSLFRQMLSEGSRPSRGAILNA 117
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+A + + V+ VV+ GL +V ++ M+A+ G +A+ +FDG
Sbjct: 118 MACVRSHEE---ADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDG------ 168
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
++ +D+VTW + I Y + EALG+ M+
Sbjct: 169 -------------------------IMSKDLVTWATTIEAYVKADMPLEALGLLKQMML- 202
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF--DATGPVGNALISCYAKVGGV 329
+ PD TL + AC+ L +L +H II T F + V ALI Y K G +
Sbjct: 203 QGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSL 261
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
A+K+ DG +++R+++ W+AM+ GY
Sbjct: 262 TYARKV-----------------FDG----------------MQERNIITWSAMISGYGM 288
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLS 448
+G ++A+ LF M + KP++ T ++LS S + G + S R G
Sbjct: 289 HGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPE 347
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ + +AG ++ A + R W +++ A H L + ++ R L
Sbjct: 348 HYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIH-LNVDLAEMVARAL-F 405
Query: 509 GIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKN 542
+ P + YV + T G ++ +MKN
Sbjct: 406 DLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKN 440
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 31 VGKLVHARIIKCGLHLSVFL--KNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
+ +VH II G + L + +L++ Y K S++YA+KVFD M + + +W+ ++S
Sbjct: 227 LAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISG 285
Query: 89 YAKQGRLDLACEVFNLMP---NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
Y G A +F+ M D +++ +I+ + G F M +D
Sbjct: 286 YGMHGWGREALNLFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARD------ 339
Query: 146 FTVTSVLASCTALGDL--SAGK--KVHSFVVKTGLSGCVNVTNSLLN---MYAKVG-DEM 197
F VT + D+ AGK + F+ + + V +LL ++ V EM
Sbjct: 340 FGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEM 399
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
+A+A+FD + N + ++ +++ +G+ A + M R V IAGYS
Sbjct: 400 VARALFD-LDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGV----KKIAGYS 450
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/551 (39%), Positives = 332/551 (60%), Gaps = 12/551 (2%)
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
++ + + M+A Y+ +G ++ +F + D FT L + L + +G
Sbjct: 101 LQPTALVGSKMVAFYASSGDIDSSVSVFNGI-------GDYFTFPFVLKSSVELLSVWMG 153
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
K +H I+R V +LI Y K G + A K+ + I +V ++ LL GY
Sbjct: 154 KCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR--DVSSWNALLAGYT 211
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE--GPKPNNYTL 415
K G I A IF+ + R++V+WT M+ GY Q+GL + A+ LF MV+E G +PN T+
Sbjct: 212 KSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTI 271
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
++L + L++L+ G+QIH A R G S+ SV AL MY+K G++ AR F+ ++
Sbjct: 272 MSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNR 331
Query: 476 RQET-VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
++ ++W +MI A A +G G +A+ F M++ GI+PD IT+ G+L+ C+H GLV+ G
Sbjct: 332 NEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGL 391
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
+Y+N M + I P H+A + DLLGRAG L EA + MP+ WGSLL+ACR
Sbjct: 392 KYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRK 451
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H+NL++ + AA KL ++EP+N+G Y L N+Y+ G+W++ +R +K G KK+ G S
Sbjct: 452 HRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCS 511
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQML 714
W++I K H+F D HPQ IY + + +++K G+ PDT+ VLHD+ E+ KE L
Sbjct: 512 WIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNL 571
Query: 715 RHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
HSEKLA+AFG+++TP T LR+ KNLR+C DCH+A+ FI ++ RE++VRD RFHHF
Sbjct: 572 IAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHF 631
Query: 775 KKGLCSCRDYW 785
K G CSC DYW
Sbjct: 632 KGGCCSCGDYW 642
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 149/269 (55%), Gaps = 8/269 (2%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L+S+++ + ++GK VH I++ GL +++ SL+ Y K I+ A KVFD M
Sbjct: 137 FPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMT 196
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++ + SWN +L+ Y K G +D A +F MP R+ VSWTT+I Y++ G + A+ +F E
Sbjct: 197 IRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDE 256
Query: 136 MVQDQ--VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
MV++ V P T+ SVL +C L L G+++H + GL+ +V +L MYAK
Sbjct: 257 MVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKC 316
Query: 194 GDEMMAKAVFDGMRL--KNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNS 247
G + A+ FD + KN+ +WN +++ + G A + F +MI+ D +T+
Sbjct: 317 GSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTG 376
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+++G S +G L F +M S+ P
Sbjct: 377 LLSGCSHSGLVDVGLKYFNHMSTTYSINP 405
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 206/446 (46%), Gaps = 51/446 (11%)
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT VL S L + GK VH +++ GL + V SL+ +Y K G+ A VFD
Sbjct: 135 FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDN 194
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M +++VSSWN +++ + SG +D A A F++M R++V+W +MI+GYSQ+G +AL +F
Sbjct: 195 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 254
Query: 266 ANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
M+K DS ++P+ T+ S L ACA L L+ G+QIH R ++ V AL + YA
Sbjct: 255 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 314
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G + A+ ++ + N+I AW M+
Sbjct: 315 KCGSLVDARNCFDKLNRNEKNLI-------------------------------AWNTMI 343
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI--HASALRSG 442
Y G AV FR M++ G +P++ T + +LS S +D G + H S S
Sbjct: 344 TAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSI 403
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ + + +AG + A ++ + W S++ A +H E A
Sbjct: 404 NP-RVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAA 462
Query: 503 ERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
++ L +P++ YV + G ++ + ++K+ K +P S +++ G
Sbjct: 463 RKLFVL--EPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKS-QGTKKSPG--CSWIEING 517
Query: 562 RAGLL----------QEAYNFIENMP 577
+A + +E Y F+E +P
Sbjct: 518 KAHMFLGGDTSHPQGKEIYMFLEALP 543
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 349/598 (58%), Gaps = 46/598 (7%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD++ ER+V+ N MI Y NG+ E + +F M +++PD +T L AC+
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACS 151
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ +G++IH + +T VGN L+S Y K G + A+ ++++ +S +V+++
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE--MSRRDVVSW 209
Query: 350 TTLLDGY------------------IKIG-DIG------PA------------RRIFDSL 372
+L+ GY +KI D G PA + +F +
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+ +V+W M+ Y +N + +AVEL+ M +G +P+ +++++L ++L GK
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH R +L + NALI MY+K G + AR VF + R + VSWT+MI A
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISAYGFS 388
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G G +A+ LF ++ + G+ PD I +V L AC+H GL+E+G+ + +M + +KI P H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
A MVDLLGRAG ++EAY FI++M +EP+ WG+LL ACRVH + D+G +AA+KL +
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P+ SG Y L N+Y+ G+WE+ NIR MK G+KK G S V++ +H F V D H
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQ D IY ++ + ++KE+G+VPD+ S LHDVEE+ KE L HSEKLAI F L++T E
Sbjct: 569 PQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKE 628
Query: 733 -----NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
N T+RI KNLR+C DCH A K I ++ REI++RD RFH F+ G+CSC DYW
Sbjct: 629 EEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/549 (24%), Positives = 222/549 (40%), Gaps = 106/549 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+ VH+RII L + L LM YA + ++ A+KVFDE+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI------------------ 100
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
P R+ + +I +Y G + +++F M V P +T VL
Sbjct: 101 -------------PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C+ G + G+K+H K GLS + V N L++MY K G A+ V D M ++V
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 213 SWNVVVSLHIHSGRLDLA-------------------------------------RAQFD 235
SWN +V + + R D A + F
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+M ++ +V+WN MI Y +N EA+ +++ M D +PD ++ S L AC + L
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALS 326
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
LGK+IH YI R + + NALI YAK G +E
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE------------------------- 361
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
AR +F++++ RDVV+WTAM+ Y +G DAV LF + G P++
Sbjct: 362 --------KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIH 474
L+ S L+ G+ + + L ++ + +AG + A R +
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQG 533
W +++ A H + + +++ +L P+ Y +L+ G E+
Sbjct: 474 MEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA--PEQSGYYVLLSNIYAKAGRWEEV 531
Query: 534 QRYYNMMKN 542
N+MK+
Sbjct: 532 TNIRNIMKS 540
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 44/361 (12%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y + D+ AR++FD + +R+V+ M+ Y NG + V++F +M +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+YT +L S ++ G++IH SA + G +S+L V N L++MY K G ++ AR V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA---CTHGG 528
+ R++ VSW S++V AQ+ ++A+++ M + I D T +L A T
Sbjct: 200 EMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA---YNFIENMPLEPDVVAW 585
++ ++ M K + + M+ + + + EA Y+ +E EPD V+
Sbjct: 259 VMYVKDMFFKMGKK------SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 586 GSLLSACRVHKNLDLGK-----IAAEKL---LLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
S+L AC L LGK I +KL LL+E +AL ++Y+ CG E A +
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE-------NALIDMYAKCGCLEKARD 365
Query: 638 IRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPD 697
+ ++MK V SW + + +G + DA+ ++ ++++ G VPD
Sbjct: 366 VFENMKSRDV-----VSWTAM---ISAYG---FSGRGCDAV-----ALFSKLQDSGLVPD 409
Query: 698 T 698
+
Sbjct: 410 S 410
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 69/305 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H K GL ++F+ N L++ Y K +S A+ V DEM + + SWN+++ YA
Sbjct: 158 IGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 91 KQGRLDLACEV-------------------------------------FNLMPNRDSVSW 113
+ R D A EV F M + VSW
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+I Y + A+ ++ M D P ++TSVL +C LS GKK+H ++ +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
L + + N+L++MYAK G A+ VF+ M+ ++V SW
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW------------------- 378
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+MI+ Y +G +A+ +F+ L+DS L PD +TL+AC++
Sbjct: 379 ------------TAMISAYGFSGRGCDAVALFSK-LQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 294 LKLGK 298
L+ G+
Sbjct: 426 LEEGR 430
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 24 LKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS-- 81
+K+ P +++R+ G S++ T ++S KK+ + K L
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 82 --WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
N ++ YAK G L+ A +VF M +RD VSWT +I Y GR +A+ +F ++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGK 165
++P + LA+C+ G L G+
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGR 430
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/605 (37%), Positives = 349/605 (57%), Gaps = 39/605 (6%)
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER-DV 242
+ +L+ + G ++ A+ + G L V + +V L+ G + LAR FD+M + +V
Sbjct: 77 SCVLSRAVRPGRQLHARLLVSGTGLDAVLA-TRLVDLYASCGHVSLARRVFDEMPNQGNV 135
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
WN +I Y+++G A+ ++ ML S+KPD FT L ACA L L G+++H
Sbjct: 136 FLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHD 195
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++RT + +V T L+D Y K G +
Sbjct: 196 RVMRTNWAT---------------------------------DVFVCTGLIDMYAKCGCM 222
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +F+ RD W +M+ QNG +A+ L R+M EG P TL + +S +
Sbjct: 223 DEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAA 282
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQETVS 481
+ ++L G+++H R G S + +L+ MY+K+G + A +F L+H +E +S
Sbjct: 283 AVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLH--RELIS 340
Query: 482 WTSMIVALAQHGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
W +MI HG + A +LF RM E + PDHIT+VGVL+AC HGG+V++ + +++M
Sbjct: 341 WNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLM 400
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
V+ IKPT H+ +VD+LG +G +EA + I+ M ++PD WG+LL+ C++HKN++L
Sbjct: 401 VTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVEL 460
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
++A +KL+ +EP+++G Y L N+Y+ GKWE+AA +RK M G+KK SW++++
Sbjct: 461 AELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKG 520
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
K H F V D HP+ D IY ++ ++ I + G+VPDT V H+VE+D K M+ HSE+
Sbjct: 521 KFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSER 580
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAFGLISTP T L + KNLRVC DCH IK I ++ REI++RD R+HHF G CS
Sbjct: 581 LAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECS 640
Query: 781 CRDYW 785
C+D+W
Sbjct: 641 CKDHW 645
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 205/512 (40%), Gaps = 133/512 (25%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA +L+S + SR G+ +HAR++ G L L L++ YA +S A++
Sbjct: 71 YATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARR------ 124
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVS-WTTIIVTYNEIGRFKNAIRMFV 134
VF+ MPN+ +V W +I Y G + AI ++
Sbjct: 125 -------------------------VFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYR 159
Query: 135 EMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
M+ + P FT VL +C AL DLSAG++VH V++T + V V L++MYAK
Sbjct: 160 AMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKC 219
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G +D A A F+ RD WNSMIA
Sbjct: 220 GC-------------------------------MDEAWAVFNDTTIRDAAVWNSMIAACG 248
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
QNG EAL + NM + + P TL S +SA A L G+++H Y R F +
Sbjct: 249 QNGRPAEALTLCRNMAAEG-IAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQD 307
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +L+ YAK G V +A + EQ L
Sbjct: 308 KLKTSLLDMYAKSGWVMVAHVLFEQ---------------------------------LL 334
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGK 432
R++++W AM+ G+ +G A ELF M E P++ T +LS + +HG
Sbjct: 335 HRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLS------ACNHGG 388
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ + V + ++T+YS + +T ++ L
Sbjct: 389 MVQEAK---------EVFDLMVTVYSIKPTVQ----------------HYTCLVDVLGHS 423
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
G +EA + + ML +KPD + +L C
Sbjct: 424 GRFKEASDVIKGML---VKPDSGIWGALLNGC 452
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 48/325 (14%)
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
A+ L +C ++ G+Q+HA ++ + + L+ YA G V +
Sbjct: 72 ATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSL---------- 121
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELF 400
ARR+FD + ++ +V W ++ Y ++G + A+EL+
Sbjct: 122 -----------------------ARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELY 158
Query: 401 RSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
R+M+ G KP+N+T +L ++L L G+++H +R+ A+ + V LI MY+K
Sbjct: 159 RAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAK 218
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G ++ A VFN R V W SMI A Q+G EA+ L M GI P T V
Sbjct: 219 CGCMDEAWAVFNDTTIRDAAV-WNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVS 277
Query: 520 VLTACTHGGLVEQGQRYYNM-----MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
++A + +G+ + + K+K S++D+ ++G + A+ E
Sbjct: 278 AISAAAVASALPRGRELHGYGWRRGFGSQDKLK------TSLLDMYAKSGWVMVAHVLFE 331
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLD 599
+ L ++++W +++ +H + D
Sbjct: 332 QL-LHRELISWNAMICGFGMHGHAD 355
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 8/189 (4%)
Query: 408 PKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P N++ A + S L+ ++ G+Q+HA L SG ++ L+ +Y+ G+++ A
Sbjct: 63 PSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLA 122
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACT 525
RRVF+ + + W +I A A+ G E AI+L+ ML G +KPD+ TY VL AC
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA 182
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
+ G+ ++ V + F ++D+ + G + EA+ + + D
Sbjct: 183 ALLDLSAGREVHD---RVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIR-DAA 238
Query: 584 AWGSLLSAC 592
W S+++AC
Sbjct: 239 VWNSMIAAC 247
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/672 (35%), Positives = 371/672 (55%), Gaps = 62/672 (9%)
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
TQ +S+L +C +L +L K+VH++V KTGL + LL +++ V +V
Sbjct: 4 TQHLCSSLLTNCRSLKNL---KQVHAYVCKTGLDTDPIIAGKLL-LHSAV-------SVP 52
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
D LD AR F DV N++I G +++ +L
Sbjct: 53 DA---------------------LDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLI 91
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F M + + D F+ A L A A+ L+ G Q+H I D VG L+S Y
Sbjct: 92 TFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMY 151
Query: 324 AKVGGVEIAQKIVEQ-----------------------------SGISYLNVIAFTTLLD 354
++ G V A+K+ E+ + + + N+ ++ +L
Sbjct: 152 SECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLA 211
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYT 414
GY K G++ AR++F + +D V+W+ M+VG+ NG +A FR + + G +PN +
Sbjct: 212 GYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVS 271
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
L+ LS + +++ GK +H +SG +SV+NAL+ YSK GN+ AR VF +
Sbjct: 272 LTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMP 331
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
++ VSWTSMI LA HG GEEAIQLF M E GI+PD I ++ +L AC+H GL+E+G
Sbjct: 332 EKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGY 391
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
Y+ MK+++ I+P H+ MVDL GRAG L +AY FI +MP+ P + W +LL AC +
Sbjct: 392 EYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSI 451
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H N+ L + E+L ++P+NSG + L N+Y+ GKW+D A +R+SM + KT G+S
Sbjct: 452 HGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWS 511
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMG-FVPDTASVLHDVEEDVKEQM 713
+++ ++ F + + + Y K+ +I +++ G ++P+ SVLHD+E++ KE
Sbjct: 512 MIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDS 571
Query: 714 LRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHH 773
+ HSEKLA+AFG+ + + +RI+KNLRVC DCH+ +K I K+ EIVVRD +RFH
Sbjct: 572 VSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHS 631
Query: 774 FKKGLCSCRDYW 785
FK G CSCRDYW
Sbjct: 632 FKTGSCSCRDYW 643
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 193/403 (47%), Gaps = 68/403 (16%)
Query: 9 LISPLEFY--AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
L +PL+ + A LL++ R+ G +H + I GL +F+ +L++ Y++ +++
Sbjct: 100 LTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAF 159
Query: 67 AKKVFDEM-------------------------------PVKTLCSWNTILSAYAKQGRL 95
AKKVF+EM P + L SWN +L+ Y K G L
Sbjct: 160 AKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGEL 219
Query: 96 DLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASC 155
+LA ++F MP +D VSW+T+IV + G F A F E+ Q + P + ++T L++C
Sbjct: 220 ELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSAC 279
Query: 156 TALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWN 215
G + GK +H F+ K+G V+V N+LL+ Y+K G+ MA+ VF+ M K
Sbjct: 280 ADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEK------ 333
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
R +V+W SMIAG + +GY EA+ +F M ++S ++
Sbjct: 334 ------------------------RSIVSWTSMIAGLAMHGYGEEAIQLFHEM-EESGIR 368
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCYAKVGGVEIAQ 333
PD S L AC++ ++ G + + Y ++ ++ + + ++ Y + G ++ A
Sbjct: 369 PDGIAFISILYACSHAGLIEKGYE-YFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAY 427
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
+ + + I + TLL G++ A R+ + L + D
Sbjct: 428 EFIIHMPV-LPTAIIWRTLLGACSIHGNVKLAERVKERLSELD 469
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 202/456 (44%), Gaps = 68/456 (14%)
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-TQ 145
SA + LD A +F PN D T+I E +N++ FVEM + P
Sbjct: 47 SAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDS 106
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
F+ +L + + L +G ++H + GL + V +L++MY++ G AK VF+
Sbjct: 107 FSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEE 166
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ----------- 254
M NV +WN VV+ G + A F++M R++ +WN M+AGY++
Sbjct: 167 MFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLF 226
Query: 255 --------------------NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
NG+ +EA G F L+ ++P++ +L LSACA+ +
Sbjct: 227 LEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRE-LQQVGMRPNEVSLTGALSACADAGAI 285
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
+ GK +H +I ++ F V NAL+ Y+K G
Sbjct: 286 EFGKILHGFIEKSGFLWMVSVNNALLDTYSKCG--------------------------- 318
Query: 355 GYIKIGDIGPARRIFDSLRD-RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
++G AR +F+ + + R +V+WT+M+ G +G ++A++LF M G +P+
Sbjct: 319 ------NVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGI 372
Query: 414 TLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
++L S ++ G + + ++ ++ +Y +AG ++ A
Sbjct: 373 AFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIH 432
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ + W +++ A + HG + A ++ ER+ EL
Sbjct: 433 MPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSEL 468
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI--TMYSKAGNINAARRV 469
N+T S+ ++ SL + KQ+HA ++G + ++ L+ + S ++ ARR+
Sbjct: 2 NHTQHLCSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRL 61
Query: 470 FNLIHWRQETVSW-TSMIVALAQHGLGEEAIQLFERMLELGIKP-DHITYVGVLTACTHG 527
F +H+ V ++I LA+ + ++ F M P D ++ +L A
Sbjct: 62 F--LHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASY 119
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
+E G + + VH + ++V + G + A E M EP+VVAW +
Sbjct: 120 RSLESGIQLH-CQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEM-FEPNVVAWNA 177
Query: 588 LLSAC 592
+++AC
Sbjct: 178 VVTAC 182
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/704 (33%), Positives = 372/704 (52%), Gaps = 71/704 (10%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
I AY + G L +A + FN + + SW TI+ ++++ F + +++F M+++ L
Sbjct: 53 IFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVD 112
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
F + + +C L K HS +K L G V +L+N+Y ++G A VF+
Sbjct: 113 SFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFE 172
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
+ LKN V W MI G+ +F +
Sbjct: 173 EVPLKNS-------------------------------VIWGVMIKGHLNFSEEFGVFEL 201
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F+ M + S + D F + + AC N+ K GK H I+ F +
Sbjct: 202 FSRM-RRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDS------------ 248
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
N T+L+D Y+K G + A ++F+ + RDVV W+A++
Sbjct: 249 --------------------NFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAII 288
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G+ +NG +++ +FR M+ + PN+ T ++++ SSL SL G+ +H +R+G
Sbjct: 289 AGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVE 348
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ + I MY+K G I A RVF I + SW++MI HGL EA+ LF
Sbjct: 349 LDVKNYTSFIDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMHGLCAEALNLFYE 407
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + P+ +T+V VL+AC+H G +E+G ++ M + I P H+A MVDLLGRAG
Sbjct: 408 MRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAG 467
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
+ EA +FI NMP EP AWG+LL ACR+H+ +L + A+KLL +E D SG Y L N
Sbjct: 468 KIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSN 527
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED---WLHPQRDAIYNK 681
+Y+ G WE R M G+ K GF+ ++I+ K+++F ED + + Q ++++N
Sbjct: 528 IYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNS 587
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + ++E+G+VPD VLHDV+++VK+++L HSEKLAI FGL+++ E +RI KN
Sbjct: 588 LK---ERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKN 644
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RVC DCH+A KFI + R+I++RD RFHH + G+CSC DYW
Sbjct: 645 MRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 191/430 (44%), Gaps = 73/430 (16%)
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
+++ Y + G L+ A +VF +P ++SV W +I + +F M +
Sbjct: 153 ALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFEL 212
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSF----VVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
F V ++ +C G++ AGK+ +F + K + + SL++MY K G
Sbjct: 213 DPFVVEGLIQAC---GNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCG----- 264
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
LD A F+++ RDVV W+++IAG+++NG
Sbjct: 265 --------------------------FLDFALKLFEEISYRDVVVWSAIIAGFARNGRAL 298
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
E++ MF ML DS + P+ T AS + AC++L LK G+ +H Y+IR
Sbjct: 299 ESISMFRQMLADS-VTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRN------------ 345
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
GVE L+V +T+ +D Y K G I A R+F + +++V +
Sbjct: 346 --------GVE-------------LDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFS 384
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W+ M+ G+ +GL +A+ LF M PN+ T ++LS S ++ G S
Sbjct: 385 WSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMS 444
Query: 440 RSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
R + + A ++ + +AG I+ A N + +W +++ A H E A
Sbjct: 445 RDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELA 504
Query: 499 IQLFERMLEL 508
++ +++L L
Sbjct: 505 EEVAKKLLPL 514
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 200/436 (45%), Gaps = 53/436 (12%)
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
++ +I G L +A F+ + ++ +WN+++A +S+N ++ L +F MLK+ L
Sbjct: 52 MIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKL- 110
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
D F L + AC L + K H+ I+ + V AL++ Y ++G +E A K+
Sbjct: 111 VDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKV 170
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
E+ + ++ V W M+ G+
Sbjct: 171 FEEVPL---------------------------------KNSVIWGVMIKGHLNFSEEFG 197
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA-SSLSVSNALI 454
ELF M R G + + + + ++ ++ + GK H ++ S+ + +L+
Sbjct: 198 VFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLV 257
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY K G ++ A ++F I +R + V W+++I A++G E+I +F +ML + P+
Sbjct: 258 DMYMKCGFLDFALKLFEEISYR-DVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNS 316
Query: 515 ITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
+T+ ++ AC+ G ++QG+ + M++N ++ ++ S +D+ + G + AY
Sbjct: 317 VTFASIVLACSSLGSLKQGRSVHGYMIRN--GVELDVKNYTSFIDMYAKCGCIVTAYRVF 374
Query: 574 ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI-------EPDNSGAYSALCNLY 626
+P E +V +W ++++ +H + AE L L + NS + ++ +
Sbjct: 375 CQIP-EKNVFSWSTMINGFGMH------GLCAEALNLFYEMRSVNQLPNSVTFVSVLSAC 427
Query: 627 SSCGKWEDAANIRKSM 642
S G+ E+ + KSM
Sbjct: 428 SHSGRIEEGWSHFKSM 443
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 43/269 (15%)
Query: 37 ARIIKCGLHLSVFLKNSLM----NFYAKTESISY----AKKVFDEMPVKTLCSWNTILSA 88
+R+ + G L F+ L+ N YA E ++ KK F + +++
Sbjct: 203 SRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFID---SNFFLQTSLVDM 259
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y K G LD A ++F + RD V W+ II + GR +I MF +M+ D V P T
Sbjct: 260 YMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTF 319
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
S++ +C++LG L G+ VH ++++ G+ V S ++MYAK G + A VF +
Sbjct: 320 ASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPE 379
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
KNV SW ++MI G+ +G EAL +F M
Sbjct: 380 KNVFSW-------------------------------STMINGFGMHGLCAEALNLFYEM 408
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLG 297
+ L P+ T S LSAC++ +++ G
Sbjct: 409 RSVNQL-PNSVTFVSVLSACSHSGRIEEG 436
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH +I+ G+ L V S ++ YAK I A +VF ++P K + SW+T+++ +
Sbjct: 335 GRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGM 394
Query: 92 QGRLDLACEVF------NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G A +F N +PN SV++ +++ + GR + F M +D
Sbjct: 395 HGLCAEALNLFYEMRSVNQLPN--SVTFVSVLSACSHSGRIEEGWSHFKSMSRD 446
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/768 (32%), Positives = 398/768 (51%), Gaps = 100/768 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L+S + + G+ VHA +++ + V + N+L+ Y K + A+ +FD+
Sbjct: 138 FPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDK-- 195
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
MP RD +SW +I Y E + +F
Sbjct: 196 -----------------------------MPTRDRISWNAMISGYFENDECLEGLELFFR 226
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + + P T+TSV+++C LGD G ++HS+VV+T G ++V NSL+ MY VG
Sbjct: 227 MRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGH 286
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A++VF GM ++V V+W ++I+G N
Sbjct: 287 WKEAESVFSGMECRDV-------------------------------VSWTTIISGCVDN 315
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+AL + M ++ PD+ T+AS LSACA+L +L +G ++H RT V
Sbjct: 316 LLPDKALETYKTMEITGTM-PDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVV 374
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI Y+K +E A +I F + D+
Sbjct: 375 ANSLIDMYSKCKRIEKALEI---------------------------------FHQIPDK 401
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DV++WT+++ G N +A+ FR M+ + KPN+ TL + LS + + +L GK+IH
Sbjct: 402 DVISWTSVINGLRINNRCFEALIFFRKMILK-SKPNSVTLISALSACARVGALMCGKEIH 460
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A AL++G + NA++ +Y + G + A FNL ++ +W ++ AQ G G
Sbjct: 461 AHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLN--EKDVGAWNILLTGYAQKGKG 518
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
++LF+RM+E I PD +T++ +L AC+ G+V +G Y+ MK + I P H+A
Sbjct: 519 AMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYAC 578
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VDLLGRAG L EA+ FIE MP++PD WG+LL+ACR+H+++ LG++AA+ + + ++
Sbjct: 579 VVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAES 638
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G Y LCNLY+ GKW++ A +R++MK G+ G SWV+++ KVH F D HPQ
Sbjct: 639 IGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQM 698
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
I + ++++K GF S + ++ K + HSE+ AIA+ LI++
Sbjct: 699 QEINVVLEGFYEKMKTSGFNGQECSSMDGIQTS-KADIFCGHSERQAIAYSLINSAPGMP 757
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+ + KNL +C CHS +KFI K+V REI VRD +FHHFK GLCSC D
Sbjct: 758 IWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 246/514 (47%), Gaps = 80/514 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +LS + + G + A VF M RD SW ++ Y + G F A+ ++ ++ +
Sbjct: 73 NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +T SVL SC DL G++VH+ VV+ V+V N+L+ MY K GD + A+ +
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARML 192
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M ++ SW N+MI+GY +N E L
Sbjct: 193 FDKMPTRDRISW-------------------------------NAMISGYFENDECLEGL 221
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ S+ PD T+ S +SAC L +LG Q+H+Y++RT +D V N+LI
Sbjct: 222 ELFFRM-RELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQM 280
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y VG + A+ + SG+ +V+++TT++ G +
Sbjct: 281 YLSVGHWKEAESVF--SGMECRDVVSWTTIISGCV------------------------- 313
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
N L A+E +++M G P+ T++++LS +SL LD G ++H A R+G
Sbjct: 314 ------DNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTG 367
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V+N+LI MYSK I A +F+ I ++ +SWTS+I L + EA+ F
Sbjct: 368 HILYVVVANSLIDMYSKCKRIEKALEIFHQIP-DKDVISWTSVINGLRINNRCFEALIFF 426
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA----SMVD 558
+M+ L KP+ +T + L+AC G + G+ + H +K +++D
Sbjct: 427 RKMI-LKSKPNSVTLISALSACARVGALMCGKEIH-----AHALKAGMGFDGFLPNAILD 480
Query: 559 LLGRAGLLQEAYN-FIENMPLEPDVVAWGSLLSA 591
L R G ++ A N F N E DV AW LL+
Sbjct: 481 LYVRCGRMRTALNQFNLN---EKDVGAWNILLTG 511
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 225/463 (48%), Gaps = 55/463 (11%)
Query: 196 EMMAKAVFDGM-RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
E + KAV + L +V N ++S+ + G + A F +M ERD+ +WN ++ GY++
Sbjct: 53 EYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTK 112
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G+ EAL ++ +L + ++PD +T S L +CA L G+++HA+++R +FD
Sbjct: 113 AGFFDEALCLYHRILW-AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVD 171
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V NALI+ Y +K GD+ AR +FD +
Sbjct: 172 VVNALITMY---------------------------------VKCGDVVSARMLFDKMPT 198
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD ++W AM+ GY +N + +ELF M P+ T+++++S L G Q+
Sbjct: 199 RDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQL 258
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H+ +R+ ++SV N+LI MY G+ A VF+ + R + VSWT++I + L
Sbjct: 259 HSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR-DVVSWTTIISGCVDNLL 317
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
++A++ ++ M G PD +T VL+AC G ++ G + +H++ H
Sbjct: 318 PDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMK-------LHELAERTGHIL 370
Query: 555 ------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
S++D+ + +++A +P + DV++W S+++ R++ I K+
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQIP-DKDVISWTSVINGLRINNRCFEALIFFRKM 429
Query: 609 LLIEPDNS----GAYSALCNLYS-SCGKWEDAANIRKSMKYVG 646
+L NS A SA + + CGK A ++ M + G
Sbjct: 430 ILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDG 472
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +LIS L A + GK +HA +K G+ FL N++++ Y +
Sbjct: 435 PNSVTLISALSACA-------RVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGR 487
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTTIIVT 119
+ A F+ + K + +WN +L+ YA++G+ + E+F M N D V++ +++
Sbjct: 488 MRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCA 546
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL--SAGK--KVHSFVVKTG 175
+ G + F Q + + +T L + DL AGK + H F+ +
Sbjct: 547 CSRSGMVTEGLEYF------QRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMP 600
Query: 176 LSGCVNVTNSLLNM-----YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+ + +LLN + +G E+ A+ +F +++ + ++ +L+ SG+ D
Sbjct: 601 IKPDPAIWGALLNACRIHRHVLLG-ELAAQHIFK-QDAESIGYYILLCNLYADSGKWD 656
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/783 (32%), Positives = 424/783 (54%), Gaps = 73/783 (9%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P E+ + +L + +++ + +G VH ++K GL VF+ N+LM Y K
Sbjct: 192 IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKC------- 244
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
G LDL +F MP RD SW T+I + + ++
Sbjct: 245 ------------------------GFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280
Query: 129 AIRMFVEMVQDQVLPT-QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A F M + L F+++++L +C G+++H+ +K GL ++V++SL+
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
Y K G +F+ M +++V +W +++ ++ G LD A F++M +R+ +++N+
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
++AG S+N AL +F ML++ ++ TL S ++AC L+ K+ +QI ++++
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEG-VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKF 459
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
G + N+ I T L+D Y + G + A +
Sbjct: 460 -----GILSNSCIE----------------------------TALVDMYTRCGRMEDAEK 486
Query: 368 IF--DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS-AMLSVSSS 424
IF SL + T+M+ GY +NG +A+ LF S EG + +S ++LS+ S
Sbjct: 487 IFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGS 546
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+ + GKQ+H AL+SG + V NA ++MYSK N++ A RVFN ++ Q+ VSW
Sbjct: 547 IGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN-MQDIVSWNG 605
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG--GLVEQGQRYYNMMKN 542
++ H G++A+ ++++M + GIKPD IT+ +++A H LV+ + + M+
Sbjct: 606 LVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
H IKPT H+AS + +LGR GLL+EA I NMPLEPDV W +LL++CR++KN L K
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEK 725
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AA +L +EP + +Y NLYS+ G+W + +R+ M+ G +K SW+ +NK+
Sbjct: 726 LAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKI 785
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F D HPQ IY+ + + E ++G+VPDT+ VL +VEE K++ L +HS KLA
Sbjct: 786 HSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLA 845
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
FG++ T ++I+KN+R+C DCH+ +K++ + R+I++RD + FH F G CSC
Sbjct: 846 ATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCT 905
Query: 783 DYW 785
DYW
Sbjct: 906 DYW 908
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/590 (24%), Positives = 264/590 (44%), Gaps = 74/590 (12%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
++ SP + LL+ + + +P + + VHA+ +K L +FL N+L++ Y K + A
Sbjct: 96 TIASPFD----LLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDA 149
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
KVF + + S+ ++S ++K D
Sbjct: 150 DKVFSGLSCPNVVSYTALISGFSKSDWED------------------------------- 178
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+ +F M+ + P ++T ++L +C D G +VH VVK GL CV + N+L+
Sbjct: 179 EAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALM 238
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+Y K G + +F+ M ++++SWN V+S + + D
Sbjct: 239 GLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD------------------- 279
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
EA F M LK D F+L++ L+ACA K G+Q+HA ++
Sbjct: 280 ------------EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKV 327
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
++ V ++LI Y K G + E I +VI +T ++ Y++ G + A
Sbjct: 328 GLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIR--DVITWTGMITSYMEFGMLDSAVE 385
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F+ + R+ +++ A+L G +N A+ELF M+ EG + ++ TL+++++ L S
Sbjct: 386 VFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKS 445
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE-TVSWTSMI 486
+QI ++ G S+ + AL+ MY++ G + A ++F + T TSMI
Sbjct: 446 FKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMI 505
Query: 487 VALAQHGLGEEAIQLFER-MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
A++G EAI LF E I D + +L+ C G E G++ +
Sbjct: 506 CGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGL 565
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
I T A+ V + + + +A M ++ D+V+W L++ +H
Sbjct: 566 ITETGVGNAT-VSMYSKCWNMDDAVRVFNTMNMQ-DIVSWNGLVAGHVLH 613
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 336/589 (57%), Gaps = 31/589 (5%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
L AR F + DV +N++I G S + AL +F M + S PD F+ A L
Sbjct: 55 LHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLK 114
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ-------- 338
A AN L G Q+H + D+ VG LIS YA+ + A+K+ ++
Sbjct: 115 AAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVA 174
Query: 339 ---------------------SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+ N+ ++ +L GY K G++ AR +F + +D
Sbjct: 175 WNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDD 234
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V+W+ M+VG+ NG DA FR + REG +PN +L+ +LS + + + G+ +H
Sbjct: 235 VSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGF 294
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+SG +SV+NALI YSK GN++ AR VF+ + R+ VSWT+MI +A HG GEE
Sbjct: 295 VEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMHGYGEE 353
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
AI+LF M E IKPD IT++ +L AC+H GLV+ G Y++ M N + I+P H+ MV
Sbjct: 354 AIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMV 413
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DL GRAG LQ+AY+F+ MP+ P+ + W +LL AC +H NL L +L ++P+NSG
Sbjct: 414 DLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSG 473
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
+ L N+Y+ GKW+D A +R+SM + +KKT G+S +++ ++ F + +
Sbjct: 474 DHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVE 533
Query: 678 IYNKMAKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
+ K+ +I ++ E G+VP+ SVLHD+E + KE + HSEKLA+AFG+ P +
Sbjct: 534 AHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAI 593
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R++KNLR+C DCH+ +K I K+ + EIVVRD +RFH F G CSCRDYW
Sbjct: 594 RVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 198/433 (45%), Gaps = 76/433 (17%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM- 74
+A LL++ R G +H + GL +F+ +L++ YA+ + +A+KVFDEM
Sbjct: 109 FAFLLKAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMI 168
Query: 75 ------------------------------PVKTLCSWNTILSAYAKQGRLDLACEVFNL 104
P++ L SWN +L+ Y K G L LA EVF
Sbjct: 169 EPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMK 228
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
MP +D VSW+T+IV + G F +A F E+ ++ + P + ++T VL++C G G
Sbjct: 229 MPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFG 288
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
+ +H FV K+G ++V N+L++ Y+K G+ MA+ VFD
Sbjct: 289 RILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFD-------------------- 328
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
M+ R V+W +MIAG + +GY EA+ +F N +++S++KPD T S
Sbjct: 329 -----------NMLRRSAVSWTAMIAGMAMHGYGEEAIRLF-NEMEESNIKPDSITFISI 376
Query: 285 LSACANLEKLKLG-----KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
L AC++ + LG + ++ Y I + G ++ Y + G ++ A V Q
Sbjct: 377 LYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYG----CMVDLYGRAGKLQQAYDFVCQM 432
Query: 340 GISYLNVIAFTTLLDGYIKIGDI---GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
IS N I + TLL G++ G +R L + + Y G KD
Sbjct: 433 PIS-PNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDV 491
Query: 397 VELFRSMVREGPK 409
L RSM + K
Sbjct: 492 AALRRSMTHQRLK 504
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 194/457 (42%), Gaps = 78/457 (17%)
Query: 82 WNTILSAYA-KQGRLDLACEV------------FNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+ T L++Y G+L L C V F + N D + T+I ++ N
Sbjct: 29 FKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSN 88
Query: 129 AIRMFVEMVQDQV-LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+++FVEM + V LP F+ +L + L+ G ++H V GL + V +L+
Sbjct: 89 ALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLI 148
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+MYA+ + A+ VFD M N+ +WN +V+ + A F M R++ +WN
Sbjct: 149 SMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNI 208
Query: 248 MIAGYSQNGYDFEALGMFANM-LKD-----------------------------SSLKPD 277
M+AGY++ G A +F M LKD ++P+
Sbjct: 209 MLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPN 268
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
+ +L LSACA + G+ +H ++ ++ F V NALI Y+K G +++
Sbjct: 269 EVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDM------ 322
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
AR +FD++ R V+WTAM+ G +G ++A+
Sbjct: 323 ---------------------------ARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAI 355
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITM 456
LF M KP++ T ++L S +D G + + + G + ++ +
Sbjct: 356 RLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDL 415
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
Y +AG + A + + W +++ A + HG
Sbjct: 416 YGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHG 452
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/668 (35%), Positives = 368/668 (55%), Gaps = 70/668 (10%)
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH--------------------IHSG 225
L++ YA GD + VFD M KNV WN +VS + I
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
R + A FD++ +RDV++WNSMI+GY NG LG++ M+ + D T+ S L
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMY-LGIDVDLATIISVL 120
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG----I 341
CA L LGK +H+ I++ F+ N L+ Y+K G ++ A ++ E+ G +
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 342 SY-----------------------------LNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
S+ L+V+A T++L + G + + + D +
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 373 RDRDVVA----WTAMLVGYEQNGLNKDAVELFRSMVREGP----------KPNNYTLSAM 418
+ ++ + A++ Y + G + A +F +MV + KP++ T++ +
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 300
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L +SL++L+ GK+IH LR+G +S V+NAL+ +Y K G + AR +F++I ++
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKD 359
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSWT MI HG G EAI F M + GI+PD ++++ +L AC+H GL+EQG R++
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 419
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
+MKN I+P H+A MVDLL R G L +AY FIE +P+ PD WG+LL CR++ ++
Sbjct: 420 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDI 479
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+L + AE++ +EP+N+G Y L N+Y+ KWE+ +R+ + G++K G SW++I
Sbjct: 480 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEI 539
Query: 659 QNKVHVF-GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHH 717
+ +V++F + HP I + + K+ ++KE G+ P T L + +E KE L H
Sbjct: 540 KGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGH 599
Query: 718 SEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
SEKLA+AFGL++ P T+R+ KNLRVC DCH KF+ K REIV+RD+ RFHHFK G
Sbjct: 600 SEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDG 659
Query: 778 LCSCRDYW 785
CSCR +W
Sbjct: 660 YCSCRGFW 667
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 165/639 (25%), Positives = 267/639 (41%), Gaps = 112/639 (17%)
Query: 54 LMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG-------------------- 93
L++FYA + ++VFD M K + WN ++S YAK G
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
R + A E+F+ + +RD +SW ++I Y G + + ++ +M+ + T+ SVL
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
C G LS GK VHS +K+ +N +N+LL+MY+K GD A VF+ M +NV S
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 214 WNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMI-----AGYSQNGYD----FE 260
W +++ + G D A QM ++ DVV S++ +G NG D +
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241
Query: 261 ALGMFANM---------------------------LKD--------SSLKPDKFTLASTL 285
A M +N+ +KD LKPD T+A L
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACIL 301
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
ACA+L L+ GK+IH YI+R + + V NAL+
Sbjct: 302 PACASLSALERGKEIHGYILRNGYSSDRHVANALV------------------------- 336
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
D Y+K G +G AR +FD + +D+V+WT M+ GY +G +A+ F M
Sbjct: 337 --------DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRD 388
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
G +P+ + ++L S L+ G + + L ++ + S+ GN++
Sbjct: 389 AGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLS 448
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
A + + + W +++ + E A ++ ER+ EL +P++ Y VL A
Sbjct: 449 KAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFEL--EPENTGYY-VLLAN 505
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+ E+ + M + + K + S +++ GR L N P
Sbjct: 506 IYAE-AEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNN-----SSHPHSKK 559
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
SLL R K + G K LI D ALC
Sbjct: 560 IESLLKKMR-RKMKEEGYFPKTKYALINADEMQKEMALC 597
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 160/364 (43%), Gaps = 84/364 (23%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
KS +GK VH+ IK + N+L++ Y+K + A +VF++M + + SW +
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 184
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+++ Y + G W+ AI + +M ++ V
Sbjct: 185 MIAGYTRDG-------------------WSD------------GAIILLQQMEKEGVKLD 213
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+TS+L +C G L GK VH ++ ++ + V N+L++MYAK G A +VF
Sbjct: 214 VVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFS 273
Query: 205 GMRLKNVSSWNV------------------------------------------------ 216
M +K++ SWN
Sbjct: 274 TMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 333
Query: 217 -VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
+V L++ G L LAR FD + +D+V+W MIAGY +GY EA+ F N ++D+ ++
Sbjct: 334 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF-NEMRDAGIE 392
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCYAKVGGVEIAQ 333
PD+ + S L AC++ L+ G + YI++ +F+ + + ++ ++ G + A
Sbjct: 393 PDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 451
Query: 334 KIVE 337
K +E
Sbjct: 452 KFIE 455
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/793 (33%), Positives = 399/793 (50%), Gaps = 120/793 (15%)
Query: 8 SLISPLEFYAHLLQ--SNLKSRNPFVGKLVHARIIKCG--LHLSVFLKNSLMNFYAKTES 63
+L S FY HLLQ ++L + KL+H+ + G LH FL L+ Y+K
Sbjct: 20 ALPSLHHFYDHLLQCCTSLTTL-----KLIHSSLSTRGFLLHTPHFLAR-LIILYSKLGD 73
Query: 64 ISYAKKVFD----------EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+ A+ +FD + P LC NT+L AYA GR
Sbjct: 74 LHSARTLFDHRHHHHHGHTQAPNSFLC--NTMLRAYANAGR------------------- 112
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+Y AI +++ M + V FT VL C + G+ VH VV+
Sbjct: 113 -----SYE-------AIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
TG + V +L++MYAK G+ + A
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGE-------------------------------IGDAHEV 189
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD+M+ RDVV W +MI Y Q +AL +F M ++ L D+ T S SA L
Sbjct: 190 FDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG-DEITAISVASAVGQLGD 248
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
++ +H Y + F VGN+++ YAK G VE
Sbjct: 249 GRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVE----------------------- 285
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
AR +FD + +R+ ++W +ML GY QNG DA+ LF M PN
Sbjct: 286 ----------RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPV 335
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T M+S S L S G+++H + S ++ NA++ MY K G+++ A +FN
Sbjct: 336 TALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNC 395
Query: 474 HWRQETVS-WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ VS W +I HG G+EA++LF RM G++P+ IT+ +L+AC+H GL+++
Sbjct: 396 ELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDE 455
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G++ + M + ++P H+A MVD+LGRAG L EA+ I+ +P P WG+LL AC
Sbjct: 456 GRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLAC 514
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQG 652
R+H N +LG+IAA L +EP+++G Y + N+Y++ KW++ +R++MK G+KK
Sbjct: 515 RIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAA 574
Query: 653 FSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ 712
FS ++ +VH F D P +Y K+ + E+K +G+VPD + VLHDVE + KE
Sbjct: 575 FSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEH 634
Query: 713 MLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
+L +HSEKLA+AFG++ + +++ KNLRVC+DCH A KFI + R+I+VRD RFH
Sbjct: 635 LLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFH 694
Query: 773 HFKKGLCSCRDYW 785
HF+ G CSC DYW
Sbjct: 695 HFQGGRCSCGDYW 707
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 83/193 (43%), Gaps = 40/193 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP + + + ++L +L G+ +H +I + + L+N++M+ Y K
Sbjct: 332 PNPVTALIMVSACSYLGSKHL-------GRKLHNFVISSKMDIDTTLRNAIMDMYMKCGD 384
Query: 64 ISYAKKVFD--EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+ A ++F+ E+ + + SWN ++S Y G A E+F+
Sbjct: 385 LDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFS------------------ 426
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
RM VE V+ P T TS+L++C+ G + G+K + + K + +
Sbjct: 427 ---------RMQVEGVE----PNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMK 473
Query: 182 VTNSLLNMYAKVG 194
+++M + G
Sbjct: 474 HYACMVDMLGRAG 486
>gi|356562121|ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 921
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/715 (33%), Positives = 393/715 (54%), Gaps = 78/715 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA +IK L ++NSL++ Y K +I+ A+ +F + +L WN+++ Y++
Sbjct: 164 LHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIESPSLFCWNSMIYGYSQLYG 223
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
A VF MP RD VSW T+I +++ G + FVEM P T SVL++
Sbjct: 224 PYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSA 283
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C ++ DL G +H+ +++ S + + L++MYAK G
Sbjct: 284 CASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCG-------------------- 323
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
L LAR F+ + E++ V+W I+G +Q G +AL +F N ++ +S+
Sbjct: 324 -----------CLALARRVFNSLGEQNQVSWTCFISGVAQFGLGDDALALF-NQMRQASV 371
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
D+FTLA+ L C+ G+ +H Y I++ D++ PVGNA+I+ YA+ G E A
Sbjct: 372 VLDEFTLATILGVCSGQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASL 431
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + I++T ++ + + GDI AR+ FD + +R+V+ W +ML Y Q+G ++
Sbjct: 432 AFRS--MPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSE 489
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+ ++L+ M + KP+ T + + + LA++ G Q+ + + G +S +SV+N+++
Sbjct: 490 EGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIV 549
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
TMYS+ G I AR+VF+ IH + +SW +M+ A AQ+GLG +AI+ +E ML KPDH
Sbjct: 550 TMYSRCGQIKEARKVFDSIHVKN-LISWNAMMAAFAQNGLGNKAIETYEAMLRTECKPDH 608
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
I+YV VL+ DLLGRAGLL +A N I+
Sbjct: 609 ISYVAVLS-----------------------------------DLLGRAGLLNQAKNLID 633
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
MP +P+ WG+LL ACR+H + L + AA+KL+ + ++SG Y L N+Y+ G+ E+
Sbjct: 634 GMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELEN 693
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A++RK MK G++K+ G SW+++ N+VHVF V++ HPQ + +Y K+ ++ +I++ G
Sbjct: 694 VADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINKVYVKLEEMMKKIEDTGR 753
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
S H + ++HSEKLA AFGL+S P +++ KNLRVCNDCH
Sbjct: 754 YVSIVSCAHRSQ--------KYHSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCH 800
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 317/660 (48%), Gaps = 84/660 (12%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P + + +HA++I GL S+FL N+L++ Y+ + A +VF E + +WNT+L
Sbjct: 19 SPPIARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLH 78
Query: 88 AYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
A+ GR+ A +F+ MP RDSVSWTT+I Y + G ++I+ F+ M++D Q
Sbjct: 79 AFFDSGRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQ 138
Query: 146 ----FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
F+ T + +C L ++H+ V+K L + NSL++MY K G +A+
Sbjct: 139 NCDPFSYTCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAET 198
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F + ++ WN ++ + A F +M ERD V+WN++I+ +SQ G+
Sbjct: 199 IFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRC 258
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L F M + KP+ T S LSACA++ LK G +HA I+R E +G+ LI
Sbjct: 259 LSTFVEMC-NLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLID 317
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G + +A RR+F+SL +++ V+WT
Sbjct: 318 MYAKCGCLALA---------------------------------RRVFNSLGEQNQVSWT 344
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+ G Q GL DA+ LF M + + +TL+ +L V S G+ +H A++S
Sbjct: 345 CFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAASGELLHGYAIKS 404
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G SS+ V NA+ITMY++ G+ A F + R +T+SWT+MI A +Q+G + A Q
Sbjct: 405 GMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLR-DTISWTAMITAFSQNGDIDRARQC 463
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA------- 554
F+ M E + IT+ +L+ G E+G + Y +M++ +KP FA
Sbjct: 464 FDMMPERNV----ITWNSMLSTYIQHGFSEEGMKLYVLMRS-KAVKPDWVTFATSIRACA 518
Query: 555 ----------------------------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
S+V + R G ++EA +++ ++ ++++W
Sbjct: 519 DLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK-NLISWN 577
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIE--PDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
++++A + + E +L E PD+ + L +L G A N+ M +
Sbjct: 578 AMMAAFAQNGLGNKAIETYEAMLRTECKPDHISYVAVLSDLLGRAGLLNQAKNLIDGMPF 637
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 227/451 (50%), Gaps = 14/451 (3%)
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G +K+H+ ++ +GL + + N+LL++Y+ G A VF N+ +WN ++
Sbjct: 18 GSPPIARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTML 77
Query: 219 SLHIHSGRLDLARAQFDQM--IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS--- 273
SGR+ A FD+M I RD V+W +MI+GY QNG ++ F +ML+DS+
Sbjct: 78 HAFFDSGRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDI 137
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
D F+ T+ AC L +L Q+HA++I+ A + N+L+ Y K G + +A+
Sbjct: 138 QNCDPFSYTCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAE 197
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
I I ++ + +++ GY ++ A +F + +RD V+W ++ + Q G
Sbjct: 198 TIFLN--IESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHG 255
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+ F M G KPN T ++LS +S++ L G +HA LR + + + L
Sbjct: 256 IRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGL 315
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K G + ARRVFN + Q VSWT I +AQ GLG++A+ LF +M + + D
Sbjct: 316 IDMYAKCGCLALARRVFNSLG-EQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLD 374
Query: 514 HITYVGVLTACTHGGLVEQGQ--RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
T +L C+ G+ Y + + P + +++ + R G ++A
Sbjct: 375 EFTLATILGVCSGQNYAASGELLHGYAIKSGMDSSVPVGN---AIITMYARCGDTEKASL 431
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+MPL D ++W ++++A + ++D +
Sbjct: 432 AFRSMPLR-DTISWTAMITAFSQNGDIDRAR 461
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/658 (34%), Positives = 361/658 (54%), Gaps = 71/658 (10%)
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+A+ + M + V T + ++ C A G + GK+VH + G +TN L+
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILI 327
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
NMY K L+ A+ FD+M ER+VV+W +
Sbjct: 328 NMYVKFN-------------------------------LLEEAQVLFDKMPERNVVSWTT 356
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
MI+ YS + A+ + A M +D + P+ FT +S L AC L LK Q+H++I++
Sbjct: 357 MISAYSNAQLNDRAMRLLAFMFRDGVM-PNMFTFSSVLRACERLYDLK---QLHSWIMKV 412
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
++ +V + L+D Y K+G++ A +
Sbjct: 413 GLES---------------------------------DVFVRSALIDVYSKMGELLEALK 439
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F + D V W +++ + Q+ +A+ L++SM R G + TL+++L +SL+
Sbjct: 440 VFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSL 499
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ G+Q H L+ + L ++NAL+ MY K G++ A+ +FN + +++ +SW++MI
Sbjct: 500 LELGRQAHVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFNRMA-KKDVISWSTMIA 556
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
LAQ+G EA+ LFE M G KP+HIT +GVL AC+H GLV +G Y+ M N++ I
Sbjct: 557 GLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGID 616
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ M+DLLGRA L + I M EPDVV W +LL ACR +N+DL AA++
Sbjct: 617 PGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKE 676
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
+L ++P ++GAY L N+Y+ +W D A +R++MK G++K G SW+++ ++H F +
Sbjct: 677 ILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFIL 736
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HPQ D I ++ + + G+VPDT VL D+E + +E LR+HSEKLAI FG+
Sbjct: 737 GDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGI 796
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+S P+ T+RI KNL++C DCH K I +L R IV+RD R+HHF+ G+CSC DYW
Sbjct: 797 MSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 189/416 (45%), Gaps = 101/416 (24%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ L++ L GK VH I G H FL N L+N Y K + A+ +FD+
Sbjct: 288 YSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDK-- 345
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
MP R+ VSWTT+I Y+ A+R+
Sbjct: 346 -----------------------------MPERNVVSWTTMISAYSNAQLNDRAMRLLAF 376
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M +D V+P FT +SVL +C L DL K++HS+++K GL V V ++L+++Y+K+G+
Sbjct: 377 MFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGE 433
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ A V F +M+ D V WNS+IA ++Q+
Sbjct: 434 LLEALKV-------------------------------FREMMTGDSVVWNSIIAAFAQH 462
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
EAL ++ +M + D+ TL S L AC +L L+LG+Q H ++++ FD +
Sbjct: 463 SDGDEALHLYKSM-RRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLIL 519
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+ Y K G +E A+ IF+ + +
Sbjct: 520 NNALLDMYCKCGSLE---------------------------------DAKFIFNRMAKK 546
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
DV++W+ M+ G QNG + +A+ LF SM +GPKPN+ T+ +L S ++ G
Sbjct: 547 DVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG 602
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 55/318 (17%)
Query: 46 LSVFLKNSLM-NFYAKTESISYAKKVFDEMPVKTLCSW-------------NTILSAYAK 91
L+ ++ +M N + + + ++++D +K L SW + ++ Y+K
Sbjct: 374 LAFMFRDGVMPNMFTFSSVLRACERLYD---LKQLHSWIMKVGLESDVFVRSALIDVYSK 430
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G L A +VF M DSV W +II + + A+ ++ M + Q T+TSV
Sbjct: 431 MGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSV 490
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +CT+L L G++ H V+K +N N+LL+MY K G AK +F+ M K+V
Sbjct: 491 LRACTSLSLLELGRQAHVHVLKFDQDLILN--NALLDMYCKCGSLEDAKFIFNRMAKKDV 548
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM---------IERDVVTWNSMIAGYSQNGYDF--- 259
SW+ +++ +G A F+ M I V + AG G+ +
Sbjct: 549 ISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRS 608
Query: 260 ------------------------EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
E L ++ + + +PD T + L AC + +
Sbjct: 609 MNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVD 668
Query: 296 LGKQIHAYIIRTEFDATG 313
L I++ + TG
Sbjct: 669 LATYAAKEILKLDPQDTG 686
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/571 (38%), Positives = 344/571 (60%), Gaps = 40/571 (7%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N+++++++ G L A+ FD+M +R+VV+W +MI+ YS + +AL ML++ +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG-V 62
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+P+ FT +S L AC L L+ Q+H II+ D+
Sbjct: 63 RPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDS----------------------- 96
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+V + L+D Y + G++ A R+FD + D+V W++++ G+ QN
Sbjct: 97 ----------DVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGD 146
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A+ LF+ M R G TL+++L + LA L+ G+Q+H L+ + L ++NAL+
Sbjct: 147 EALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQ--DLILNNALL 204
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY K G++ A VF + ++ +SW++MI LAQ+G +EA++LFE M LGIKP++
Sbjct: 205 DMYCKCGSLEDANAVF-VRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNY 263
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+T VGVL AC+H GLVE+G Y++ MK + I P H+ M+DLLGRAG L EA + I
Sbjct: 264 VTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLIN 323
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
M EPD V W +LL+ACRVH+N+D+ AA+++L ++P ++G Y L N+Y++ +W D
Sbjct: 324 EMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWND 383
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A +R++M G+KK G SW+++ ++H F + D HPQ I ++ ++ ++ +G+
Sbjct: 384 VAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGY 443
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VPDT VL D+E + + LR+HSEKLAI FGL+S P T+RI KNLR+C DCH K
Sbjct: 444 VPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKL 503
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K+ R IV+RD R+HHF+ GLCSC D+W
Sbjct: 504 LAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 207/437 (47%), Gaps = 72/437 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K G L A +VF+ MP+R+ VSWTT+I Y+ A+ V M+++ V
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P FT +SVL +C L +L +++H ++K GL V V ++L+++Y++ G+
Sbjct: 64 PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGE------- 113
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
L+ A FD+M+ D+V W+S+IAG++QN EAL
Sbjct: 114 ------------------------LENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEAL 149
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M K + + TL S L AC L L+LG+Q+H ++++ +D + NAL+
Sbjct: 150 RLFKRM-KRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDM 206
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G +E A +F + ++DV++W+
Sbjct: 207 YCKCGSLE---------------------------------DANAVFVRMVEKDVISWST 233
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRS 441
M+ G QNG +K+A++LF SM G KPN T+ +L S ++ G H+
Sbjct: 234 MIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELF 293
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G +I + +AG ++ A + N + + V+W +++ A H + AI
Sbjct: 294 GIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHA 353
Query: 502 FERMLELGIKPDHITYV 518
+++L L D TYV
Sbjct: 354 AKQILRLD-PQDAGTYV 369
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 65/256 (25%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H IIK GL VF++++L++ Y++ + A +VFDEM L W++I++ +A+
Sbjct: 85 LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSD 144
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
D A+R+F M + L Q T+TSVL +
Sbjct: 145 GD-------------------------------EALRLFKRMKRAGFLAQQTTLTSVLRA 173
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
CT L L G++VH V+K +N N+LL+MY K G A AVF M
Sbjct: 174 CTGLALLELGRQVHVHVLKYDQDLILN--NALLDMYCKCGSLEDANAVFVRM-------- 223
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+E+DV++W++MIAG +QNGY EAL +F +M K +
Sbjct: 224 -----------------------VEKDVISWSTMIAGLAQNGYSKEALKLFESM-KVLGI 259
Query: 275 KPDKFTLASTLSACAN 290
KP+ T+ L AC++
Sbjct: 260 KPNYVTIVGVLFACSH 275
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/770 (32%), Positives = 403/770 (52%), Gaps = 100/770 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL++ + + + +G++VHARI+K FL N L+N Y+K +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLD--------------- 56
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+ + RL V L P R+ VSWT++I + G F A+ F EM
Sbjct: 57 -----------HPESARL-----VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++ V+P FT + +L GK++H+ VK G V V S +MY K
Sbjct: 101 REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT---- 156
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
RL+ D AR FD++ ER++ TWN+ I+ +G
Sbjct: 157 ---------RLR------------------DDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EA+ F + P+ T + L+AC++ L LG Q+H ++R+ FD V N
Sbjct: 190 PREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
LI Y K K + S I IF + ++
Sbjct: 249 GLIDFYGKC-------KQIRSSEI--------------------------IFTEMGTKNA 275
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V+W +++ Y QN ++ A L+ ++ + +++ +S++LS + +A L+ G+ IHA
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A+++ ++ V +AL+ MY K G I + + F+ + + V+ S+I A G +
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDM 394
Query: 498 AIQLFERMLELGI--KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
A+ LFE M G P+++T+V +L+AC+ G VE G + ++ M++ + I+P H++
Sbjct: 395 ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSC 454
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VD+LGRAG+++ AY FI+ MP++P + WG+L +ACR+H LG +AAE L ++P +
Sbjct: 455 IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKD 514
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
SG + L N +++ G+W +A +R+ +K VG+KK G+SW+ ++N+VH F +D H
Sbjct: 515 SGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILN 574
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
I +AK+ +E++ G+ PD L+D+EE+ K + HHSEKLA+AFGL+S P +
Sbjct: 575 KEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVP 634
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLR+C DCHS KF+ V REI+VRD RFH FK G+CSC+DYW
Sbjct: 635 IRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/773 (31%), Positives = 398/773 (51%), Gaps = 103/773 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++ + R+ A +F+ M RD +SW +I Y+ + + +M +V
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+ S+++ C + ++ G +HS V +GL V + N+L+NMY+
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYST---------- 293
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+G+LD A + F M RDV++WN+MI+ Y Q+ EAL
Sbjct: 294 ---------------------AGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEAL 332
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA---- 318
+L+ P+ T +S L AC++ E L G+ IHA I++ +GN+
Sbjct: 333 ETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTM 392
Query: 319 ---------------------LISCYAKVGGVEIAQKI---------VEQSGI--SYLNV 346
++SC GG + + + +GI +Y+ +
Sbjct: 393 YSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITM 452
Query: 347 I--------------------AFTT-------------LLDGYIKIGDIGPARRIFDSLR 373
I A+ T L+ Y GD+ + IF +
Sbjct: 453 INLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRIN 512
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
++ V++W A++ ++G ++A++LF G K + + L+ LS S++LASL+ G Q
Sbjct: 513 NKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQ 572
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVF-NLIHWRQETVSWTSMIVALAQH 492
+H ++++G V NA + MY K G ++ + + H + T W ++I A++
Sbjct: 573 LHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAH--RPTQCWNTLISGYARY 630
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G +EA F+ M+ +G KPD++T+V +L+AC+H GL+++G YYN M + P H
Sbjct: 631 GYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKH 690
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+VDLLGR G EA FI+ MP+ P+ + W SLLS+ R HKNLD+G+ AA+ LL ++
Sbjct: 691 CVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELD 750
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P + AY L NLY++ +W D +R MK + + K SW++++N+V FG+ D H
Sbjct: 751 PFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSH 810
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
+ IY K+ +I +++E+G+V DT+S LHD +E+ KE L +HSEKLA+A+GL+ PE
Sbjct: 811 MHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPE 870
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T+RI KNLRVC DCH K + + REIV+RD RFH FK G CSC D+W
Sbjct: 871 GSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 207/489 (42%), Gaps = 82/489 (16%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG---DL 161
MP+R S SW T + G A + M + V + F + S++ +C G
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
+ G +H+ + GL G V + +LL++Y G + A+ +F M +NV SW +
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAI---- 116
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
M+A S NG EAL + M K+ + + L
Sbjct: 117 --------------------------MVA-LSSNGCMEEALVAYRRMRKEGVM-CNANAL 148
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
A+ +S C LE G Q+ A+++ + V N+LI+ + + V+ A+
Sbjct: 149 ATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAE-------- 200
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
R+FD + +RD ++W AM+ Y + +
Sbjct: 201 -------------------------RLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLS 235
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M KP+ TL +++SV +S + G IH+ + SG S+ + NAL+ MYS AG
Sbjct: 236 DMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAG 295
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI-KPDHITYVGV 520
++ A +F + R++ +SW +MI + Q EA++ ++L+ P+ +T+
Sbjct: 296 KLDEAESLFRNMS-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSA 354
Query: 521 LTACTHGGLVEQGQRYYNM-----MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
L AC+ + G+ + M ++NV I S++ + + +++ E+
Sbjct: 355 LGACSSPEALMNGRTIHAMILQRSLQNVLLIGN------SLLTMYSKCNSMEDTERVFES 408
Query: 576 MPLEPDVVA 584
MP DVV+
Sbjct: 409 MPCY-DVVS 416
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 163/360 (45%), Gaps = 44/360 (12%)
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL---EK 293
M R +W + ++G ++ G + A + ++++ + F LAS ++AC + E
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLL-RVMRERDVPLSGFALASLVTACEHRGWQEG 59
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
G IHA R G +GN I T LL
Sbjct: 60 AACGAAIHALTHRA-----GLMGNVYIG----------------------------TALL 86
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
Y G + A+R+F + R+VV+WTA++V NG ++A+ +R M +EG N
Sbjct: 87 HLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNAN 146
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
L+ ++S+ +L G Q+ A + SG + +SV+N+LITM+ + A R+F+ +
Sbjct: 147 ALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRM 206
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
R + +SW +MI + + + + M +KPD T +++ C LV G
Sbjct: 207 EER-DRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALG 265
Query: 534 QRYYNMM--KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+++ +H P ++V++ AG L EA + NM DV++W +++S+
Sbjct: 266 SGIHSLCVSSGLHCSVPL---INALVNMYSTAGKLDEAESLFRNMS-RRDVISWNTMISS 321
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/634 (37%), Positives = 353/634 (55%), Gaps = 87/634 (13%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ C L G++VH+ +V G + + L+ MYA+ G A+ V DG
Sbjct: 42 ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDG------ 95
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
M ER+VV+W +MI+GYSQN +A +F ML+
Sbjct: 96 -------------------------MPERNVVSWTAMISGYSQNERPDQAWELFIMMLR- 129
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
A + ++K Q+HA+ ++T F+
Sbjct: 130 -----------------AGIHQVK---QVHAFAVKTNFE--------------------- 148
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
L++ ++LLD Y K +I ARR+FD L RDVV++TA+L GY Q G
Sbjct: 149 ------------LHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLG 196
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
L+++A++LFR + EG + N T +A+L+ S L+S+D+GKQ+H LR +++ N
Sbjct: 197 LDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQN 256
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+LI MYSK G + +RRVF+ + R VSW +M++ +HGL E +QLF M + +K
Sbjct: 257 SLIDMYSKCGKLLYSRRVFDSMPERS-VVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVK 314
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD +T + VL+ +HGGLV++G ++ + H+ ++DLLGR+G LQ+A N
Sbjct: 315 PDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALN 374
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
IE MP +P WGSLL ACRVH N+ +G+ A+KLL IEP+N+G Y L N+Y++ G
Sbjct: 375 LIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGM 434
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+D +RK M V K G SW+ + +H F + HP+++ I K+ +I+ IK
Sbjct: 435 WKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKA 494
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
GFVPD + VLHDV+++ KE+ML HSEKLAI FGL+STP + T+++MKNLR+C DCH+
Sbjct: 495 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNF 554
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KF+ K+ REI +RD RFH +G C+C DYW
Sbjct: 555 AKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 55/296 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHAR++ G +++L L+ YA+ ++ A+ V D MP + + SW ++S Y++
Sbjct: 54 GRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQ 113
Query: 92 QGRLDLACE--------------------------------------------------V 101
R D A E V
Sbjct: 114 NERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRV 173
Query: 102 FNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDL 161
F+++P RD VS+T I+ Y ++G + A+ +F + + + Q T T++L + + L +
Sbjct: 174 FDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSM 233
Query: 162 SAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
GK+VH +++ L + + NSL++MY+K G + ++ VFD M ++V SWN ++ +
Sbjct: 234 DYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGY 293
Query: 222 IHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
G + L R+ D+ ++ D VT ++++GYS G E L MF +++K+ S
Sbjct: 294 GRHGLAHEVVQLFRSMCDE-VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQS 348
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 350/598 (58%), Gaps = 42/598 (7%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G L R FD+M +R+VV +N MI Y N + L +F M+ + +PD +T
Sbjct: 67 GEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMV-NGGFRPDNYTYPCV 125
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L AC+ E L+ G IH +++ D VGN LI+ Y K G + A+++ ++ + +
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDE--MIWK 183
Query: 345 NVIAFTTLLDGYI-------------KIGDIG------------PA------------RR 367
+V+++ +++ GY ++ D G PA +
Sbjct: 184 DVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEK 243
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
IF +L +++++W M+ Y +N L AV+L+ M + +P+ T +++L L++
Sbjct: 244 IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSA 303
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L G++IH + +L + N+LI MY++ G ++ A+RVF+ + +R + SWTS+I
Sbjct: 304 LLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR-DVASWTSLIS 362
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A G G A+ LF ML G PD I +V +L+AC+H GL+++G+ Y+ M + ++I
Sbjct: 363 AYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRIT 422
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+A +VDLLGRAG + EAYN I+ MP+EP+ W +LLS+CRV N+D+G +AA+
Sbjct: 423 PRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADN 482
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL + P+ SG Y L N+Y+ G+W++ IR MK ++KT G S V++ N+VH F
Sbjct: 483 LLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLA 542
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D HPQ IY ++ + ++KE+G+VP+T S LHDVEE+ KE L HSEKLAI F L
Sbjct: 543 GDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFAL 602
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++T E +RI KNLRVC DCH A K I K+V+REI+VRD RFHHFK G+CSC DYW
Sbjct: 603 LNTQE-YQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 193/441 (43%), Gaps = 74/441 (16%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ +YA G L +VF+ M +R+ V + +I +Y R+ + + +F EMV P
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C+ +L G +H V+K GL + V N L+ MY K G A+ VFD
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLA---------------------------------- 230
M K+V SWN +V+ + H+ R D A
Sbjct: 179 EMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV 238
Query: 231 ---RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
F + +++++WN MI Y +N +A+ ++ M K ++PD T AS L A
Sbjct: 239 LYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEK-CRVEPDAITFASVLPA 297
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C +L L LG++IH Y+ + + + N+LI YA+ G ++ A+
Sbjct: 298 CGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAK-------------- 343
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
R+FD ++ RDV +WT+++ Y G +AV LF M+ G
Sbjct: 344 -------------------RVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSG 384
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINA 465
P++ A+LS S LD G+ I+ + + + + L+ + +AG ++
Sbjct: 385 QAPDSIAFVAILSACSHSGLLDEGR-IYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDE 443
Query: 466 ARRVFNLIHWRQETVSWTSMI 486
A + + W +++
Sbjct: 444 AYNIIKQMPIEPNERVWATLL 464
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 46/319 (14%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y G+ G R++FD + DR+VV + M+ Y N D + +FR MV G +P+
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
NYT +L S +L +G IH L+ G +L V N LI MY K G + ARRVF+
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG--- 528
+ W+ + VSW SM+ A + ++A+++ M + G KPD T ++ A +
Sbjct: 179 EMIWK-DVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSEN 237
Query: 529 ----------LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
L + +N+M V+ P+ VDL Y +E +
Sbjct: 238 VLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQ---AVDL----------YLQMEKCRV 284
Query: 579 EPDVVAWGSLLSAC----------RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
EPD + + S+L AC R+H+ ++ K+ LL +NS L ++Y+
Sbjct: 285 EPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLL----ENS-----LIDMYAR 335
Query: 629 CGKWEDAANIRKSMKYVGV 647
CG +DA + MK+ V
Sbjct: 336 CGCLDDAKRVFDRMKFRDV 354
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 162/365 (44%), Gaps = 72/365 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L++ S N G L+H ++K GL ++F+ N L+ Y K + A++VFDEM
Sbjct: 122 YPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMI 181
Query: 76 VKTLCSWNTILSAYAKQGRLDLA----------------CEVFNLMP------------- 106
K + SWN++++ YA R D A C + +LMP
Sbjct: 182 WKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYV 241
Query: 107 --------NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
++ +SW +I Y + A+ ++++M + +V P T SVL +C L
Sbjct: 242 EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDL 301
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
L G+++H +V K L + + NSL++MYA+ G AK VFD M+ ++V+SW
Sbjct: 302 SALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASW---- 357
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
S+I+ Y G A+ +F ML +S PD
Sbjct: 358 ---------------------------TSLISAYGMTGQGCNAVALFTEML-NSGQAPDS 389
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCYAKVGGVEIAQKIV 336
+ LSAC++ L G+ I+ + ++ T + + L+ + G V+ A I+
Sbjct: 390 IAFVAILSACSHSGLLDEGR-IYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNII 448
Query: 337 EQSGI 341
+Q I
Sbjct: 449 KQMPI 453
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 386/708 (54%), Gaps = 67/708 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+C+ NT+++ Y+ GR + A VF M +D +SW +++ Y + G +A+++ M
Sbjct: 267 VCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFY 326
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ T TS LA+C+ + GK +H+ V+ GL V V N+L+ +YAK
Sbjct: 327 MRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAK------ 380
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
SG + A+ F M +RD VTWN++I G++ +
Sbjct: 381 -------------------------SGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEP 415
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL F ++++ + + T+++ L AC A + L+ G IHA+II T F + V N
Sbjct: 416 DEALKAF-KLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQN 474
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+LI+ YAK G D+ + IFD L ++
Sbjct: 475 SLITMYAKCG---------------------------------DLNSSNNIFDRLTSKNA 501
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
AW AM+ +G ++A++ M R G + ++ S L+ ++ LA L+ G+Q+H
Sbjct: 502 SAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGL 561
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A++ G S+ V++A + MY K G I+ R+ R +SW + + ++HG E+
Sbjct: 562 AVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSR-LSWNILTSSFSRHGFFEK 620
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A + F M+ LG+KPDH+T+V +L+AC+HGG+VE+G YY+ M I H ++
Sbjct: 621 AKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCII 680
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGR+G EA FI+ MP+ P W SLL+AC+ H NL+LG+ A E LL ++P +
Sbjct: 681 DLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDS 740
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY N+ ++ GKWED IR+ M +KK SWV+++NK+ +FG+ D HPQ
Sbjct: 741 AYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASE 800
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ IKE G++PD + L D +E+ KE L +HSE+LA+A+GLIS+PE +TL+
Sbjct: 801 IYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLK 860
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I KNLRVC DCHS KF ++ R+IV+RD RFH F G CSC DYW
Sbjct: 861 IFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 259/552 (46%), Gaps = 79/552 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S + G ++ AC VF+ M D++SW ++I Y G K ++R F M +
Sbjct: 170 NSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKE 229
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T++++LA C ++ +L G+ +HS V+K G + V +N+L+ MY+
Sbjct: 230 INSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSD---------- 279
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+GR + A F M+E+D+++WNSM+A Y+Q+G +AL
Sbjct: 280 ---------------------AGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDAL 318
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ A M + T S L+AC++ E GK +HA +I VGNAL++
Sbjct: 319 KLLATMFY-MRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTL 377
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G ++E A+++F ++ RD V W A
Sbjct: 378 YAKSG------LMIE---------------------------AKKVFQTMPKRDGVTWNA 404
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS---LDHGKQIHASAL 439
++ G+ + +A++ F+ M EG N T+S +L + LA L+HG IHA +
Sbjct: 405 LIGGHADSEEPDEALKAFKLMREEGVPINYITISNVL--GACLAPNDLLEHGMPIHAFII 462
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+G S V N+LITMY+K G++N++ +F+ + + + +M+ A A HG EEA+
Sbjct: 463 LTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAW-NAMMAANAHHGHMEEAL 521
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
+ M G+ D ++ L A ++E+GQ+ + + + P ++ +D+
Sbjct: 522 KFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKL-GCDSNPFVASATMDM 580
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL--LLIEPDNSG 617
G+ G + + I P+ ++W L S+ H + K ++ L ++PD
Sbjct: 581 YGKCGEIDDVLRIIPR-PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPD--- 636
Query: 618 AYSALCNLYSSC 629
+ +L S+C
Sbjct: 637 -HVTFVSLLSAC 647
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 213/469 (45%), Gaps = 69/469 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT-ALGDLSAGKKVHSFVVKTGLSGCVNV 182
G ++ ++R F EM V P+ V S++ +C + L G +VH F+VK GL V V
Sbjct: 8 GSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFV 67
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
SL+++Y G D M++ F +MI ++V
Sbjct: 68 GTSLVHLYGNYG------LAADAMKV-------------------------FQEMIYKNV 96
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V+W +++ Y G + ++ M + + + T++S +S C +LE LG Q+
Sbjct: 97 VSWTALMVAYVDYGEPSMVMNIYRRM-RSEGMSCNDNTMSSVISTCVSLENELLGYQVLG 155
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++I+ + V N+LIS + G VE
Sbjct: 156 HVIKYGLETNVSVANSLISMFGYFGSVE-------------------------------- 183
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +F + + D ++W +M+ Y +NGL K+++ F M R + N+ TLS ML+
Sbjct: 184 -EACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGC 242
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
S+ +L G+ IH+ L+ G S++ SN LITMYS AG A VF + ++ +SW
Sbjct: 243 GSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGM-VEKDMISW 301
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
SM+ AQ G +A++L M + +++T+ L AC+ +G+ + ++ +
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIH 361
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
V + ++V L ++GL+ EA + MP + D V W +L+
Sbjct: 362 V-GLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGG 408
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 222/503 (44%), Gaps = 98/503 (19%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH I+K GL VF+ SL++ Y + A KVF EM K +
Sbjct: 49 GVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNV------------ 96
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
VSWT ++V Y + G + ++ M + + T++SV
Sbjct: 97 -------------------VSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSV 137
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++C +L + G +V V+K GL V+V NSL++M+ G A VF GM +
Sbjct: 138 ISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDT 197
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW NSMIA Y +NG E+L F+ M +
Sbjct: 198 ISW-------------------------------NSMIAAYIRNGLCKESLRCFSWMFRV 226
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ + TL++ L+ C +++ LK G+ IH+ +++ +++ N LI+ Y+ G E
Sbjct: 227 HK-EINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCE- 284
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A +F + ++D+++W +M+ Y Q+G
Sbjct: 285 --------------------------------DAELVFQGMVEKDMISWNSMMACYAQDG 312
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
DA++L +M N T ++ L+ S GK +HA + G ++ V N
Sbjct: 313 NCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGN 372
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+T+Y+K+G + A++VF + +++ V+W ++I A +EA++ F+ M E G+
Sbjct: 373 ALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVP 431
Query: 512 PDHITYVGVLTAC-THGGLVEQG 533
++IT VL AC L+E G
Sbjct: 432 INYITISNVLGACLAPNDLLEHG 454
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 168/347 (48%), Gaps = 43/347 (12%)
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL-GKQIHAYIIRT 307
++G+ + G E++ F N ++D +KP +AS ++AC E + + G Q+H +I++
Sbjct: 1 MSGFVRAGSYRESMRFF-NEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKV 59
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ VG +L+ Y G A K+
Sbjct: 60 GLLSDVFVGTSLVHLYGNYGLAADAMKV-------------------------------- 87
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F + ++VV+WTA++V Y G + ++R M EG N+ T+S+++S SL +
Sbjct: 88 -FQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLEN 146
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
G Q+ ++ G +++SV+N+LI+M+ G++ A VF+ + +T+SW SMI
Sbjct: 147 ELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMD-EHDTISWNSMIA 205
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
A ++GL +E+++ F M + + + T +L C ++ G+ +++ V K
Sbjct: 206 AYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSL---VLKFG 262
Query: 548 PTPSHFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
+ AS ++ + AG ++A + M +E D+++W S++ AC
Sbjct: 263 WNSNVCASNTLITMYSDAGRCEDAELVFQGM-VEKDMISWNSMM-AC 307
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 138/322 (42%), Gaps = 60/322 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA II G +++NSL+ YAK ++ + +FD + K +WN +++A A
Sbjct: 454 GMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAH 513
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++ A++ +EM + V +F+ +
Sbjct: 514 HGHME-------------------------------EALKFLLEMRRAGVNVDEFSFSEC 542
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL--- 208
LA+ L L G+++H VK G V ++ ++MY K G+ + D +R+
Sbjct: 543 LAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGE------IDDVLRIIPR 596
Query: 209 ---KNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYDFEA 261
++ SWN++ S G + A+ F +MI + D VT+ S+++ S G E
Sbjct: 597 PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEG 656
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK-----QIHAYIIRTEFDATGPVG 316
L + +M+K+ F + + + C + L LG+ + +I T V
Sbjct: 657 LAYYDSMIKE-------FGIPAKIGHCVCIIDL-LGRSGRFAEAETFIKEMPVSPTDHVW 708
Query: 317 NALISCYAKVGGVEIAQKIVEQ 338
+L++ G +E+ +K VE
Sbjct: 709 RSLLAACKTHGNLELGRKAVEN 730
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H +K G + F+ ++ M+ Y K I ++ ++ SWN + S++++
Sbjct: 555 GQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSR 614
Query: 92 QGRLDLACEVFNLMPN----RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
G + A E F+ M N D V++ +++ + G + + + M++ +F
Sbjct: 615 HGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIK------EFG 668
Query: 148 VTSVLASCTALGDL--SAGK--KVHSFVVKTGLSGCVNVTNSLLNMYAKVGD-EMMAKAV 202
+ + + C + DL +G+ + +F+ + +S +V SLL G+ E+ KAV
Sbjct: 669 IPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAV 728
Query: 203 FDGMRL 208
+ ++L
Sbjct: 729 ENLLKL 734
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/604 (37%), Positives = 364/604 (60%), Gaps = 36/604 (5%)
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ +S N A G A+ + G+R ++S N++++++ G ++ AR FD+M R
Sbjct: 54 LQSSARNRAAIEGMACHAQIIRVGLRADTITS-NMLMNMYSKCGLVESARKLFDEMPVRS 112
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+WN+M+ ++QNG +AL +F M K+ + +FT++S + ACA + KQ+H
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGT-SCSEFTVSSVVCACAAKCCVFECKQLH 171
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+ ++T D+ NV T LLD Y K G
Sbjct: 172 GFALKTALDS---------------------------------NVFVGTALLDVYAKCGL 198
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A +F+ + +R V W++M+ GY QN L ++A+ LF G + N +T+S+ LS
Sbjct: 199 VKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 258
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
++ A+L GKQ+ A + ++G S++ V ++LI MY+K G I A VF+ + + V
Sbjct: 259 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVL 317
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +++ ++H EA+ FE+M ++GI P+ ITY+ VL+AC+H GLVE+G++Y+++M
Sbjct: 318 WNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMI 377
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
VH + P H++ MVD+LGRAGLL EA +FI+ MP + WGSLL++CR+++NL+L
Sbjct: 378 RVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELA 437
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
++AA+ L IEP N+G + L N+Y++ +WE+ A R +K KK +G SW++I++K
Sbjct: 438 EVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHK 497
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
VH F V + HP+ IY K+ + E+K++G+ T LHDVEE K+++LRHHSEKL
Sbjct: 498 VHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKL 557
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+ FG++ P +RIMKNLR+C DCHS +K + +REI+VRD RFHHFK G CSC
Sbjct: 558 ALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSC 617
Query: 782 RDYW 785
++W
Sbjct: 618 GEFW 621
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 217/472 (45%), Gaps = 97/472 (20%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
HLLQS+ ++R G HA+II+ GL N LMN Y+K + A+K
Sbjct: 52 HLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK-------- 103
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+F+ MP R VSW T++ ++ + G + A+ +F++M
Sbjct: 104 -----------------------LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++ ++FTV+SV+ +C A + K++H F +KT L V V +LL++YAK G
Sbjct: 141 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGL-- 198
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
V N+V F+ M ER VTW+SM+AGY QN
Sbjct: 199 -------------VKDANLV----------------FECMPERSDVTWSSMVAGYVQNEL 229
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F + + L+ ++FT++S LSACA L GKQ+ A
Sbjct: 230 YEEALVLF-HRAQAMGLEHNQFTISSALSACAARAALIEGKQVQA--------------- 273
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+SC +G N+ ++L+D Y K G I A +F S+ +++V
Sbjct: 274 --VSCKTGIGS----------------NIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 315
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V W A+L G+ ++ + +A+ F M + G PN+ T ++LS S L ++ G++
Sbjct: 316 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDL 375
Query: 438 ALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+R S ++ + ++ + +AG ++ A+ + + + W S++ +
Sbjct: 376 MIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 427
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
L +L S+ + G HA +R G + SN L+ MYSK G + +AR++F+ +
Sbjct: 50 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 109
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R VSW +M+ + Q+G E+A+ LF +M + G T V+ AC V + +
Sbjct: 110 VRS-LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK 168
Query: 535 RYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + K + F +++D+ + GL+++A E MP D V W S+++
Sbjct: 169 QLHGF---ALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAG 223
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/707 (34%), Positives = 383/707 (54%), Gaps = 66/707 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+++ Y K G++D A E+F + RD VSW ++ G A + F EM+ L
Sbjct: 279 TALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGEL 338
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL---SGCVNVTNSLLNMYAKVGDEMMA 199
P++ T ++L +C L G V + V+ G S V + +++NMY++
Sbjct: 339 PSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKS---P 395
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
K+ F SL + R DQ ++ WN++++ Y +N
Sbjct: 396 KSAFSS-------------SLLLEQDR--------DQ---PSIMMWNTVLSLYVENEQFE 431
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EA +F ML + D +L + +AC + L+ GK IH+ + +E PV NAL
Sbjct: 432 EAFTIFRLMLL-GGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNAL 490
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
++ YA++G +E AR IFD++ R+V++
Sbjct: 491 VTMYARLGSLE---------------------------------DAREIFDAMTTRNVIS 517
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
WTAM+ + Q GLN++A+ +FRS++ EG PN T +A+L+ +LAS+ K + A
Sbjct: 518 WTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLS 577
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+G ++ V+N L+ K G++ F ++ + + VSW + I A AQHG G +
Sbjct: 578 ETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQ-VSWNTAIAANAQHGNGVRGV 636
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
+LF+ M GI +T +GVL++C+H GLV QG Y+ M + H++ ++DL
Sbjct: 637 ELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDL 696
Query: 560 LGRAGLLQEAYNFIENMPL-EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
L RAG L+ A F++ +P + V W +LL C++H +L+ G A +++L + P ++G
Sbjct: 697 LSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGP 756
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y + NLY+ GKW +AA +RKSM +G KK G SW++++ ++H F V D HP+ I
Sbjct: 757 YLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEI 816
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+ ++ ++ +E+K GFV D +V++D++ KE +L HSEKLAIAFGLIST LRI
Sbjct: 817 HRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRI 876
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
MKNLRVC+DCHSA KFI LV REIVVRDA RFHHF+ G CSC D+W
Sbjct: 877 MKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 148/631 (23%), Positives = 261/631 (41%), Gaps = 128/631 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A L+ + + G+ +H I++ G+ + FL L+ Y K S A+ VF +
Sbjct: 43 FAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQ 102
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K++ +W +++ A+ G P K A +F E
Sbjct: 103 DKSVVAWTSLIGVNARSGH-----------P--------------------KEAFHLFRE 131
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC------VNVTNSLLNM 189
M V+P T +VL +C G ++ + C V V +++N
Sbjct: 132 MQLQGVMPNDVTYVAVLGAC--------GHPWEVDTIRARVEACGSLELDVIVATAVMNA 183
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K GD A VFDG+ +++ + WN ++SL + A Q D
Sbjct: 184 YGKCGDLDSAWGVFDGILVRDAAVWNAMISLLV-------AHEQGD-------------- 222
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
EAL +F M + + P+K T + L+AC + +IHA+
Sbjct: 223 ----------EALELFRQM-RLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAG 271
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
DA V AL++ Y K G V+ A++ IF
Sbjct: 272 DADTVVQTALVNMYGKFGKVDDAEE---------------------------------IF 298
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ +++RDVV+W AML NG + A + FR M+ G P+ T A+L+ A L
Sbjct: 299 ERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLK 358
Query: 430 HGKQIHASALRSG---EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS---WT 483
HG + A+ G E+ + + A++ MYS+ + +A L+ ++ S W
Sbjct: 359 HGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWN 418
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+++ ++ EEA +F ML G+ D ++ + V AC +E+G+ ++++
Sbjct: 419 TVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTES 478
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+ TP A +V + R G L++A + M +V++W +++ VH L L +
Sbjct: 479 ELTRKTPVQNA-LVTMYARLGSLEDAREIFDAMTTR-NVISWTAMVG---VHSQLGLNRE 533
Query: 604 AAE--KLLLIE--PDNSGAYSALCNLYSSCG 630
A + +L+E N ++A+ N +CG
Sbjct: 534 ALRIFRSILLEGVAPNEVTFTAVLN---ACG 561
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 41/350 (11%)
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D T A+ + CA L L G++IH I+R + +G L++ Y K G E A
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEA---- 94
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
R +F ++D+ VVAWT+++ ++G K+A
Sbjct: 95 -----------------------------RAVFQGIQDKSVVAWTSLIGVNARSGHPKEA 125
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALIT 455
LFR M +G PN+ T A+L +D I A G + V+ A++
Sbjct: 126 FHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD---TIRARVEACGSLELDVIVATAVMN 182
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
Y K G++++A VF+ I R V W +MI L H G+EA++LF +M G+ P+
Sbjct: 183 AYGKCGDLDSAWGVFDGILVRDAAV-WNAMISLLVAHEQGDEALELFRQMRLGGVTPNKG 241
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T V L AC H + R + + + T A +V++ G+ G + +A E
Sbjct: 242 TCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTA-LVNMYGKFGKVDDAEEIFER 300
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCN 624
+ E DVV+W ++L+A + D K E LL+ E + Y A+ N
Sbjct: 301 IQ-ERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILN 349
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 153/385 (39%), Gaps = 73/385 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H+ + + L ++N+L+ YA+ S+ A+++FD M + + S
Sbjct: 468 GKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVIS---------- 517
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
WT ++ ++++G + A+R+F ++ + V P + T T+V
Sbjct: 518 ---------------------WTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAV 556
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L + A K V + + +TG G V V N LL K G F M +KN
Sbjct: 557 LNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQ 616
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW N+ IA +Q+G + +F M +
Sbjct: 617 VSW-------------------------------NTAIAANAQHGNGVRGVELFQTM-QL 644
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC----YAKVG 327
+ TL LS+C++ L Q ++Y + D P SC ++ G
Sbjct: 645 EGIDTGSVTLIGVLSSCSH---AGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAG 701
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI---GPARRIFDSLRDRDVVAWTAML 384
+E A++ V++ +V + TLL G GD+ G A + L + M
Sbjct: 702 WLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMH 761
Query: 385 VGYEQNGLNKDAVELFRSMVREGPK 409
Y G +A + +SMV GPK
Sbjct: 762 NLYAGAGKWPEAAAVRKSMVELGPK 786
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 41/266 (15%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T +A++ + L L G++IH LR+G + L+ MY K G+ AR VF I
Sbjct: 42 TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ V+WTS+I A+ G +EA LF M G+ P+ +TYV VL AC H V+
Sbjct: 102 Q-DKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTI 160
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+ ++ + ++++ G+ G L A+ + + L D W +++S
Sbjct: 161 RARVEACGSLELDVIVAT---AVMNAYGKCGDLDSAWGVFDGI-LVRDAAVWNAMISLLV 216
Query: 594 VHKNLD----------LGKIAAEKLLLIEPDNSGAYS----------------------- 620
H+ D LG + K + N+ +S
Sbjct: 217 AHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTV 276
Query: 621 ---ALCNLYSSCGKWEDAANIRKSMK 643
AL N+Y GK +DA I + ++
Sbjct: 277 VQTALVNMYGKFGKVDDAEEIFERIQ 302
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 351/571 (61%), Gaps = 4/571 (0%)
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
++VS + S L R FD+ RD+ ++S++A S + L + ML +L+
Sbjct: 43 LLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALR 102
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
PD F LAS SA A L L LGKQ+H + + + + + V ++LI Y K G + A+K+
Sbjct: 103 PDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKV 162
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
+ I N + +T L+ GY+ G A +F S+ R + AWTA++ G+ ++G +
Sbjct: 163 FDS--IVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVS 220
Query: 396 AVELFRSMVREGPKPNN-YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
AV+LF M R+G ++ + LS+ + ++ LA+ G+Q+H+ +R G +SS+ V NA++
Sbjct: 221 AVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVV 280
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MYSK +I++AR VF I R + +SWT+M+V AQHG EEA L++RM+ G+KP+
Sbjct: 281 DMYSKCSDIHSAREVFEEITGR-DIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNE 339
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+T+VG++ AC+H GLV++G++ ++ MK + I P H+ +DLL R+G L EA I
Sbjct: 340 VTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELIT 399
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
MP PD W SLLSAC+ + N ++ A+ LL + P Y L N+Y+ GKW+
Sbjct: 400 TMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDS 459
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
+RK M + ++K G+SW+++ + +F + R+ I + ++ E+++ G+
Sbjct: 460 VDTVRKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGY 519
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VPDT+SV+HD+EE KE L HSE+LA+AFG++ +P + +R++KNLRVCNDCH+ +KF
Sbjct: 520 VPDTSSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKF 579
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I ++ R+I+VRDA+RFHHF+ G CSC ++W
Sbjct: 580 ISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 218/485 (44%), Gaps = 64/485 (13%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P + HAR+IK GL L++ YAK+ + + +FDE P + L ++++L+
Sbjct: 18 SPRSLRRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLA 77
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
A + +L + M + D + P F
Sbjct: 78 AVSHSESPELVLPLLRRM------------------------------LSADALRPDHFV 107
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ S+ ++ L L GK++H V + S V +SL++MY K G A+ VFD +
Sbjct: 108 LASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIV 167
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
KN W ++S ++ +GR D A F M R + W ++I+G+ ++G A+ +F +
Sbjct: 168 AKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVD 227
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D D F L+S + A+L LG+Q+H+ +R F ++ VGNA++ Y+K
Sbjct: 228 MRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCS 287
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A+++ E+ I+ ++I++TT MLVG
Sbjct: 288 DIHSAREVFEE--ITGRDIISWTT-------------------------------MLVGE 314
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-RSGEASS 446
Q+G ++A L+ MV G KPN T ++ S + G+Q+ S G
Sbjct: 315 AQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPR 374
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L + + S++G++ A + + + + +W S++ A ++ E +I++ + +L
Sbjct: 375 LQHYTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLL 434
Query: 507 ELGIK 511
EL K
Sbjct: 435 ELRPK 439
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 5/265 (1%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A + + + R+ +GK +H + +K+SL++ Y K A+KVFD +
Sbjct: 109 ASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVA 168
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
K W ++S Y GR D A E+F MP R +WT +I + G +A+++FV+M
Sbjct: 169 KNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDM 228
Query: 137 VQDQV-LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+D V + F ++S + L G+++HS ++ G S + V N++++MY+K D
Sbjct: 229 RRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSD 288
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAG 251
A+ VF+ + +++ SW ++ GR + A + +D+M+ V VT+ +I
Sbjct: 289 IHSAREVFEEITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYA 348
Query: 252 YSQNGYDFEALGMFANMLKDSSLKP 276
S G + +F +M + + P
Sbjct: 349 CSHAGLVQKGRQLFDSMKGEYGINP 373
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/603 (35%), Positives = 348/603 (57%), Gaps = 35/603 (5%)
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
TN+LL YA +GD A+ +F+G+ +NV SWN+++ I +G L AR FD+M R+V
Sbjct: 80 TNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNV 139
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
TWN+M+AG + G D ++L F M ++ + PD+F L S CA L + G+Q+HA
Sbjct: 140 ATWNAMVAGLTNVGLDEDSLQFFLAMRREG-MHPDEFGLGSVFRCCAGLLDVVSGRQVHA 198
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
Y++R+ D+ VGN+L Y + G + + ++ + L +++F T
Sbjct: 199 YVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLR--ALPSLTIVSFNT----------- 245
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
+ G QNG ++ A+E F M P+ T + +S
Sbjct: 246 --------------------TIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCC 285
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
S LA+L G+Q+HA +++G + V +L+ MYS+ G + + RV++ + +
Sbjct: 286 SDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYD-GYCGLDLFLL 344
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
++MI A HG G +A++LF++M+ G +P+ +T++ +L AC+H GL ++G ++ +M
Sbjct: 345 SAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTK 404
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ +P+ H+ +VDLLGR+G L EA I +MP+ D V W +LLSAC+ KN D+ +
Sbjct: 405 TYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAE 464
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
AE+++ +P +S Y L N+ ++ +W D +RK M+ ++K G SWV+ + +V
Sbjct: 465 RIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQV 524
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F D HP++ I + ++ +I++ G+ PD V HD+E++ KE L HHSEKLA
Sbjct: 525 HQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLA 584
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
IAF ++ PE +R+MKNLRVC+DCH AIK I ++ REIVVRD +RFHHF+ G CSC
Sbjct: 585 IAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCG 644
Query: 783 DYW 785
DYW
Sbjct: 645 DYW 647
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 211/460 (45%), Gaps = 66/460 (14%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
F N+L+ YA + A+ +F+ + + + SWN ++ K G L A E+F+ MP R
Sbjct: 78 FTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTR 137
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
+ +W ++ +G +++++ F+ M ++ + P +F + SV C L D+ +G++VH
Sbjct: 138 NVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVH 197
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
++VV++G+ + V NSL +MY + G +AV L+ + S
Sbjct: 198 AYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAV-----LRALPSLT------------- 239
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
+V++N+ IAG +QNG AL F+ M++ + PD T S +S C
Sbjct: 240 -------------IVSFNTTIAGRTQNGDSEGALEYFS-MMRGVEVAPDVVTFVSAISCC 285
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
++L L G+Q+HA +I+ D PV
Sbjct: 286 SDLAALAQGQQVHAQVIKAGVDKVVPV--------------------------------- 312
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
T+L+ Y + G +G + R++D D+ +AM+ +G AVELF+ M+ G
Sbjct: 313 ITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGA 372
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAAR 467
+PN T A+L S D G + ++ G S+ N ++ + ++G ++ A
Sbjct: 373 EPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAE 432
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ + R + V W +++ A + A ++ ER++E
Sbjct: 433 ALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIE 472
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 155/367 (42%), Gaps = 60/367 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +++ G+ + + NSL + Y + ++ + V +P T+ S+NT ++ +
Sbjct: 193 GRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQ 252
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A E F++M +V P T S
Sbjct: 253 NGDSEGALEYFSMMRGV-------------------------------EVAPDVVTFVSA 281
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
++ C+ L L+ G++VH+ V+K G+ V V SL++MY++ G ++ V+DG ++
Sbjct: 282 ISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDL 341
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ ++S G+ A F QM+ E + VT+ +++ S +G E L F
Sbjct: 342 FLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFEL 401
Query: 268 MLKDSSLKPD--KFTLASTL---SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS- 321
M K +P + L S C + + A I+ A G + L+S
Sbjct: 402 MTKTYGFQPSVKHYNCIVDLLGRSGCLD--------EAEALILSMPVRADGVIWKTLLSA 453
Query: 322 CYAKVG---GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV- 377
C + IA++++E + + + + GD+ R+I +R++D+
Sbjct: 454 CKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKI---MREKDIR 510
Query: 378 ----VAW 380
V+W
Sbjct: 511 KEPGVSW 517
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 344/595 (57%), Gaps = 36/595 (6%)
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G ++ A+ G+ + S + ++ ++ H R AR FD++ + V +M +GY
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 254 QNGYDFEALGMFANMLKDSSLKP-DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+N + +L +F ++ S D+ SA A + + +HA +++T D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V N ++ YAK GG D+G AR++FD++
Sbjct: 228 AGVVNTMLDAYAK-GGRR------------------------------DLGAARKVFDTM 256
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSM--VREGPKPNNYTLSAMLSVSSSLASLDH 430
++DVV+W +M+ Y QNG++ DA+ L+R M V K N TLSA+L + ++
Sbjct: 257 -EKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQT 315
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GK IH +R G ++ V +++ MYSK G + AR+ F I + +SW++MI
Sbjct: 316 GKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIK-EKNILSWSAMITGYG 374
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG G+EA+ +F M G P++IT++ VL AC+H GL+++G+ +YN MK I+P
Sbjct: 375 MHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGV 434
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+ MVDLLGRAG L EAY I+ M ++PD WG+LLSACR+HKN++L +I+A++L
Sbjct: 435 EHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFE 494
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
++ N G Y L N+Y+ G W+D +R +K G++K G+S V+++ + H+F V D
Sbjct: 495 LDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDK 554
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HPQ IY+ + K+ ++++E G+VP+T SVLHD++E+ K L HSEKLAIAF L+++
Sbjct: 555 SHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNS 614
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + ++KNLRVC DCH+AIK I K+ REI+VRD RFHHFK G CSC DYW
Sbjct: 615 VPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 204/483 (42%), Gaps = 101/483 (20%)
Query: 32 GKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ +H I+ GL S F ++L++ Y A+K FDE+P + S Y
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-TQFTVT 149
+ + Y + F+ I D+ F+ +
Sbjct: 168 RNN------------------------LVYPSLALFRKLIASGSATAVDEAAALVAFSAS 203
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+ + C L H+ VVKTGL G V N++L+ YAK
Sbjct: 204 ARIPDCGITSSL------HALVVKTGLDGDAGVVNTMLDAYAK----------------- 240
Query: 210 NVSSWNVVVSLHIHSGRLDL--ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
GR DL AR FD M E+DVV+WNSMIA Y+QNG +ALG++
Sbjct: 241 --------------GGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRK 285
Query: 268 MLKDS-SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML S S+K + TL++ L ACA+ ++ GK IH ++R +
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEE--------------- 330
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
NV T+++D Y K G + AR+ F ++++++++W+AM+ G
Sbjct: 331 ------------------NVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITG 372
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEAS 445
Y +G ++A+++F M R G PN T ++L+ S LD G+ +A R G
Sbjct: 373 YGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEP 432
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ ++ + +AG ++ A + + + + W +++ A H E A +R+
Sbjct: 433 GVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRL 492
Query: 506 LEL 508
EL
Sbjct: 493 FEL 495
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 66/286 (23%)
Query: 17 AHLLQSNLKSRNPFVG--KLVHARIIKCGLHLSVFLKNSLMNFYAK--TESISYAKKVFD 72
A L+ + +R P G +HA ++K GL + N++++ YAK + A+KVFD
Sbjct: 195 AALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFD 254
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
M K + SWN++++ YA+ G ++ + +G ++ +
Sbjct: 255 TME-KDVVSWNSMIALYAQNG------------------------MSADALGLYRKMLN- 288
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
V + T++++L +C G + GK +H+ VV+ GL V V S+++MY+K
Sbjct: 289 ----VSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSK 344
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G MA+ F ++ KN+ ++W++MI GY
Sbjct: 345 CGRVEMARKAFQKIKEKNI-------------------------------LSWSAMITGY 373
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
+G+ EAL +F M + S P+ T S L+AC++ L G+
Sbjct: 374 GMHGHGQEALDIFNEMCR-SGQNPNYITFISVLAACSHAGLLDKGR 418
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 35/213 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++++ GL +V++ S+++ Y+K
Sbjct: 316 GKCIHNQVVRMGLEENVYVGTSVVDMYSKC------------------------------ 345
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR+++A + F + ++ +SW+ +I Y G + A+ +F EM + P T SV
Sbjct: 346 -GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISV 404
Query: 152 LASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
LA+C+ G L G+ ++ + K G+ V ++++ + G A + M++K
Sbjct: 405 LAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 464
Query: 210 NVSSWNVVVS-LHIHSGRLDLARAQFDQMIERD 241
+ + W ++S IH ++LA ++ E D
Sbjct: 465 DAAIWGALLSACRIHK-NVELAEISAKRLFELD 496
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 252/754 (33%), Positives = 384/754 (50%), Gaps = 96/754 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH ++IK GL L +++ NSL+ YAK I A EM
Sbjct: 145 GERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESA-----EM----------------- 182
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
VF MP RD VSW ++I Y +G ++ F EM + +F+V +
Sbjct: 183 ---------VFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGI 233
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C+ G L GK++H ++++ L V V SL++MYAK G
Sbjct: 234 LGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCG----------------- 276
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
R+D A FDQ+ ++ +V WN+MI GYS N FE+ M +
Sbjct: 277 --------------RMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEG 322
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L PD T+ + L CA LE + LGK +H + IR F +
Sbjct: 323 GKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGF---------------------L 361
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
++E T L+D Y + G + PA +F + +R++++W AM+ Y +NG
Sbjct: 362 PHLVLE------------TALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNG 409
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
N+ A+ LF+ + + KP+ T++++L + LASL +QIH + S+ VSN
Sbjct: 410 ENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSN 469
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+++ MY K GN+ AR +F+ + ++ + +SW ++I+A A HG G +I+LF M E G +
Sbjct: 470 SIVFMYGKCGNLLRAREIFDRMTFK-DVISWNTVIMAYAIHGFGRISIELFSEMREKGFE 528
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+ T+V +L +C+ GLV +G Y+N MK + I P H+ ++DL+GR G L A N
Sbjct: 529 PNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKN 588
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FIE MPL P WGSLL+A R +++L +IAAE +L +E DN+G Y L N+Y+ G+
Sbjct: 589 FIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGR 648
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
WED I+ MK G++K+ G S V + +K F +D + + +Y+ + I +I E
Sbjct: 649 WEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGE 708
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+V E + + HS +LAI FGLIST + + KN+R+C CH
Sbjct: 709 DVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRF 768
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I + REI+VRD+ FHHF G CSC DYW
Sbjct: 769 AKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/531 (23%), Positives = 223/531 (41%), Gaps = 90/531 (16%)
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+N S +S ++ G + A F+ M + D WN MI G+ NG ++A+ + M
Sbjct: 58 RNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRM 117
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ ++ D FT + AC L L G+++H +I++ D +GN+LI YAK+G
Sbjct: 118 -EFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGC 176
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+E A+ + + + +++++ +++ GY+ +GD W ++
Sbjct: 177 IESAEMVFREMPVR--DLVSWNSMISGYVSVGD-----------------GWRSL----- 212
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
FR M G K + +++ +L S L +GK+IH +RS +
Sbjct: 213 ---------SCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVM 263
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V +L+ MY+K G ++ A R+F+ I + V+W +MI + + E+ +M E
Sbjct: 264 VQTSLVDMYAKCGRMDYAERLFDQIT-DKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEG 322
Query: 509 G-IKPDHITYVGVLTAC-----------THGGLVEQG--------QRYYNMMKNVHKIKP 548
G + PD IT + +L C HG + G +M K+KP
Sbjct: 323 GKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKP 382
Query: 549 TPSHFA-----------SMVDLLGRAGLLQEAYNFIE---NMPLEPDVVAWGSLLSACRV 594
F +M+ + G ++A + N L+PD S+L A
Sbjct: 383 AECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAE 442
Query: 595 HKNL-DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
+L + +I L N+ +++ +Y CG A I M + V
Sbjct: 443 LASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDV-----I 497
Query: 654 SW--VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
SW V + +H FG R +I +++ E++E GF P+ ++ +
Sbjct: 498 SWNTVIMAYAIHGFG--------RISI-----ELFSEMREKGFEPNGSTFV 535
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 5/255 (1%)
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
QS + N ++ T L Y++ G + A +F+++R D W M+ G+ NGL DAV
Sbjct: 52 QSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAV 111
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
+ + M G + +N+T ++ L L G+++H ++SG + + N+LI MY
Sbjct: 112 DFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMY 171
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
+K G I +A VF + R + VSW SMI G G ++ F M GIK D +
Sbjct: 172 AKIGCIESAEMVFREMPVR-DLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSV 230
Query: 518 VGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
+G+L AC+ G + G+ + MM++ ++ S+VD+ + G + A + +
Sbjct: 231 IGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQ--TSLVDMYAKCGRMDYAERLFDQI 288
Query: 577 PLEPDVVAWGSLLSA 591
+ +VAW +++
Sbjct: 289 T-DKSIVAWNAMIGG 302
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 142/344 (41%), Gaps = 39/344 (11%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+GK VH I+ G + L+ +L++ Y + + A+ +F +M + L SWN ++++Y
Sbjct: 346 LLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASY 405
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
K G NR A+ +F ++ + P T+
Sbjct: 406 TKNGE------------NR-------------------KAMTLFQDLCNKTLKPDATTIA 434
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L + L L +++H +V K L V+NS++ MY K G+ + A+ +FD M K
Sbjct: 435 SILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFK 494
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMF 265
+V SWN V+ + G ++ F +M E+ T+ S++ S G E F
Sbjct: 495 DVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYF 554
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+M +D ++ P L L K +I T + +L++
Sbjct: 555 NSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKN---FIEEMPLAPTARIWGSLLTASRN 611
Query: 326 VGGVEIAQKIVEQS-GISYLNVIAFTTLLDGYIKIGDIGPARRI 368
G VE+A+ E + + N + L + Y + G RI
Sbjct: 612 KGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERI 655
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 111/240 (46%), Gaps = 19/240 (7%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ ++ S L YA L ++L+ + +H + K L + F+ NS++ Y K +
Sbjct: 428 PDATTIASILPAYAEL--ASLRE-----AEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGN 480
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
+ A+++FD M K + SWNT++ AYA G ++ E+F+ M + + ++ +++++
Sbjct: 481 LLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLS 540
Query: 120 YNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG 178
+ G F M +D + P +L G+L K +F+ + L+
Sbjct: 541 CSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAK---NFIEEMPLAP 597
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFD---GMRLKNVSSWNVVVSLHIHSGRL-DLARAQF 234
+ SLL GD +A+ + + N + ++ +++ +GR D+ R +F
Sbjct: 598 TARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKF 657
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 345/543 (63%), Gaps = 4/543 (0%)
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V WN++I+G++++G + F +M++ S++ T S LSAC + L LG Q+H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMAT-AVTYVSVLSACGKGKDLLLGMQVHK 185
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++ + V NAL+ YA+ G ++ A + E G+ ++ ++T+++ G ++ G +
Sbjct: 186 RVLESGVLPDQRVENALVDMYAECGDMDAAWVLFE--GMQMRSMASWTSVISGLVRSGQV 243
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
AR +FD + +RD +AWTAM+ GY Q G +DA+E FR M + + +T+ ++++
Sbjct: 244 DRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTAC 303
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ L +L+ G+ R G + V NALI MYSK G+I A VF +H R + +W
Sbjct: 304 AQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNR-DKFTW 362
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
T++I+ LA +G GEEAI +F RML PD +T+VGVLTACTH GLV++G+ ++ M
Sbjct: 363 TAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTE 422
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ I PT H+ ++D+LGRAG L+EA + I+ MP++P+ WG+LL++CRV+ N ++G+
Sbjct: 423 AYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGE 482
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AAE+LL ++PDNS AY L N+Y+ +W+D IR+ + G+KK G S +++ +
Sbjct: 483 LAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGII 542
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F D HP IY+K+ + +++ G+VPD VL +V E+ K+++L HSEKLA
Sbjct: 543 HEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLA 602
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
+ F L+++ N +RI+KNLR+C DCH+AIK I KL RE++VRD TRFHHF+ G CSC+
Sbjct: 603 VTFALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCK 662
Query: 783 DYW 785
DYW
Sbjct: 663 DYW 665
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 203/407 (49%), Gaps = 37/407 (9%)
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
V W +I +N GRF+ + FV+MV+ + T T SVL++C DL G +VH
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
V+++G+ V N+L++MYA+ GD A +F+GM++++++SW V+S + SG++D A
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD M ERD + W +MI GY Q G +AL F M + ++ D+FT+ S ++ACA
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYM-QICKVRADEFTMVSVVTACAQ 305
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
L L+ G+ Y+ R VGNALI Y+K G +E A
Sbjct: 306 LGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERA------------------ 347
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
LD +F + +RD WTA+++G NG ++A+++F M+R P
Sbjct: 348 --LD-------------VFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTP 392
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRV 469
+ T +L+ + +D G++ S + S V LI + +AG + A
Sbjct: 393 DEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDT 452
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
+ + + + W +++ + +G E ER+LEL PD+ T
Sbjct: 453 IDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLEL--DPDNST 497
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 147/284 (51%), Gaps = 32/284 (11%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L + K ++ +G VH R+++ G+ ++N+L++ YA+ + A +F+ M
Sbjct: 164 YVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQ 223
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++++ SW +++S + G++D A ++F+ MP RD+++WT +I Y ++GRF++A+ F
Sbjct: 224 MRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRY 283
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M +V +FT+ SV+ +C LG L G+ ++ + G+ V V N+L++MY+K G
Sbjct: 284 MQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGS 343
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
++ A F M RD TW ++I G + N
Sbjct: 344 -------------------------------IERALDVFKDMHNRDKFTWTAIILGLAVN 372
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
G EA+ MF ML+ + PD+ T L+AC + + G++
Sbjct: 373 GRGEEAIDMFYRMLR-ALQTPDEVTFVGVLTACTHAGLVDKGRE 415
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/573 (39%), Positives = 346/573 (60%), Gaps = 12/573 (2%)
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML--KDSSLK 275
++LH ++ LD A + + T NSMI YS++ ++ +AN+L +++L
Sbjct: 51 IALH-NTTNLDYANKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLS 109
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
PD +T + CA L+ G +H +I+ F+ V L+ YA++G + +
Sbjct: 110 PDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNV 169
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
+ G +++ T +L+ K GDI AR++FD + +RD V W AM+ GY Q G +++
Sbjct: 170 FD--GAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSRE 227
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
A+++F M EG K N ++ +LS + L LDHG+ +HA R ++++ AL+
Sbjct: 228 ALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVD 287
Query: 456 MYSKAGNINAARRVFNLIHW---RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
MY+K GN++ A +VF W + +W+S I LA +G GEE++ LF M G++P
Sbjct: 288 MYAKCGNVDRAMQVF----WGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQP 343
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+ IT++ VL C+ GLVE+G+++++ M+NV+ I P H+ MVD+ GRAG L+EA NF
Sbjct: 344 NGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNF 403
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I +MP+ P V AW +LL ACR++KN +LG+IA K++ +E N GAY L N+Y+ W
Sbjct: 404 INSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNW 463
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
E +++R++MK GVKK G S +++ +VH F V D HP+ D I K+ +I ++
Sbjct: 464 ESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLS 523
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+V +T VL D+EE+ KE L HSEK+AIAFGLIS +R++ NLR+C DCH+
Sbjct: 524 GYVANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVA 583
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I K+ +REI+VRD RFHHFK G CSC+DYW
Sbjct: 584 KMISKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 227/488 (46%), Gaps = 73/488 (14%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYA--KTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
K +HA+++ G+ + + A T ++ YA K+ + TL + N+++ AY+
Sbjct: 26 KQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTLNSMIRAYS 85
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K P++ + I+ + N + + P +T T
Sbjct: 86 KSS-----------TPSKSFHFYANILHSNN-----------------NNLSPDNYTFTF 117
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C L G VH V+K G +V L+ MYA++G VFDG +
Sbjct: 118 LVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPD 177
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ + +++ G +D AR FD+M ERD VTWN+MIAGY+Q G EAL +F ++++
Sbjct: 178 LVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVF-HLMQ 236
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+K ++ ++ LSAC +L+ L G+ +HAY+ R + T +G AL+ YAK G V+
Sbjct: 237 MEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVD 296
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A + +F +++R+V W++ + G N
Sbjct: 297 RAMQ---------------------------------VFWGMKERNVYTWSSAIGGLAMN 323
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS--GEASSLS 448
G +++++LF M REG +PN T ++L S + ++ G++ H ++R+ G L
Sbjct: 324 GFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRK-HFDSMRNVYGIGPQLE 382
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERM 505
++ MY +AG + A N + R +W++++ A + LGE A + ++
Sbjct: 383 HYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQR---KI 439
Query: 506 LELGIKPD 513
+EL K D
Sbjct: 440 VELEDKND 447
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 143/305 (46%), Gaps = 50/305 (16%)
Query: 13 LEFYAHLLQSNLKSRNP------------------FVGKLVHARIIKCGLHLSVFLKNSL 54
FYA++L SN + +P G VH +IK G L ++ L
Sbjct: 94 FHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGL 153
Query: 55 MNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
+ YA+ +S VFD L + +L+A AK G +D A ++F+ MP RD V+W
Sbjct: 154 VFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWN 213
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I Y + GR + A+ +F M + V + ++ VL++CT L L G+ VH++V +
Sbjct: 214 AMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERY 273
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+ V + +L++MYAK G+ A VF GM+
Sbjct: 274 KVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMK--------------------------- 306
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
ER+V TW+S I G + NG+ E+L +F +M K ++P+ T S L C+ + +
Sbjct: 307 ----ERNVYTWSSAIGGLAMNGFGEESLDLFNDM-KREGVQPNGITFISVLKGCSVVGLV 361
Query: 295 KLGKQ 299
+ G++
Sbjct: 362 EEGRK 366
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/604 (37%), Positives = 364/604 (60%), Gaps = 36/604 (5%)
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ +S N A G A+ + G+R ++S N++++++ G ++ AR FD+M R
Sbjct: 27 LQSSARNRAAIEGMACHAQIIRVGLRADTITS-NMLMNMYSKCGLVESARKLFDEMPVRS 85
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+WN+M+ ++QNG +AL +F M K+ + +FT++S + ACA + KQ+H
Sbjct: 86 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGT-SCSEFTVSSVVCACAAKCCVFECKQLH 144
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+ ++T D+ NV T LLD Y K G
Sbjct: 145 GFALKTALDS---------------------------------NVFVGTALLDVYAKCGL 171
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A +F+ + +R V W++M+ GY QN L ++A+ LF G + N +T+S+ LS
Sbjct: 172 VKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSA 231
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
++ A+L GKQ+ A + ++G S++ V ++LI MY+K G I A VF+ + + V
Sbjct: 232 CAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVE-EKNVVL 290
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +++ ++H EA+ FE+M ++GI P+ ITY+ VL+AC+H GLVE+G++Y+++M
Sbjct: 291 WNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMI 350
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
VH + P H++ MVD+LGRAGLL EA +FI+ MP + WGSLL++CR+++NL+L
Sbjct: 351 RVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELA 410
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
++AA+ L IEP N+G + L N+Y++ +WE+ A R +K KK +G SW++I++K
Sbjct: 411 EVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHK 470
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
VH F V + HP+ IY K+ + E+K++G+ T LHDVEE K+++LRHHSEKL
Sbjct: 471 VHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKL 530
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+ FG++ P +RIMKNLR+C DCHS +K + +REI+VRD RFHHFK G CSC
Sbjct: 531 ALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSC 590
Query: 782 RDYW 785
++W
Sbjct: 591 GEFW 594
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 217/472 (45%), Gaps = 97/472 (20%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
HLLQS+ ++R G HA+II+ GL N LMN Y+K + A+K
Sbjct: 25 HLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK-------- 76
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+F+ MP R VSW T++ ++ + G + A+ +F++M
Sbjct: 77 -----------------------LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++ ++FTV+SV+ +C A + K++H F +KT L V V +LL++YAK G
Sbjct: 114 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCG--- 170
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
V N+V F+ M ER VTW+SM+AGY QN
Sbjct: 171 ------------LVKDANLV----------------FECMPERSDVTWSSMVAGYVQNEL 202
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F + + L+ ++FT++S LSACA L GKQ+ A
Sbjct: 203 YEEALVLF-HRAQAMGLEHNQFTISSALSACAARAALIEGKQVQA--------------- 246
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+SC +G N+ ++L+D Y K G I A +F S+ +++V
Sbjct: 247 --VSCKTGIGS----------------NIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 288
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V W A+L G+ ++ + +A+ F M + G PN+ T ++LS S L ++ G++
Sbjct: 289 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDL 348
Query: 438 ALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+R S ++ + ++ + +AG ++ A+ + + + W S++ +
Sbjct: 349 MIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 400
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 3/177 (1%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
L +L S+ + G HA +R G + SN L+ MYSK G + +AR++F+ +
Sbjct: 23 LQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP 82
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
R VSW +M+ + Q+G E+A+ LF +M + G T V+ AC V + +
Sbjct: 83 VRS-LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECK 141
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + + +++D+ + GL+++A E MP D V W S+++
Sbjct: 142 QLHGFALKT-ALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSD-VTWSSMVAG 196
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/649 (36%), Positives = 356/649 (54%), Gaps = 72/649 (11%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PTQ T ++ SC LS G VH +V +G + L+NMY ++G
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGS------- 128
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+D A FD+ ER + WN++ + G+ E L
Sbjct: 129 ------------------------IDRALKVFDETRERTIYVWNALFRALAMVGHGKELL 164
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLE----KLKLGKQIHAYIIRTEFDATGPVGNA 318
++ M D+FT L AC E L+ GK+IHA+I+R ++A
Sbjct: 165 DLYIQM-NWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEA------- 216
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
N+ TTLLD Y K G + A +F ++ ++ V
Sbjct: 217 --------------------------NIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFV 250
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPK--PNNYTLSAMLSVSSSLASLDHGKQIHA 436
+W+AM+ + +N + A+ELF+ M+ E PN+ T+ ML + LA+L+ GK IH
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHG 310
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
LR S L V NALITMY + G + +RVF+ + +++ VSW S+I HG G+
Sbjct: 311 YILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMK-KRDVVSWNSLISIYGMHGFGK 369
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
+AIQ+FE M+ G+ P +I+++ VL AC+H GLVE+G+ + M + ++I P H+A M
Sbjct: 370 KAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 429
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLLGRA L EA IE+M EP WGSLL +CR+H N++L + A+ L +EP N+
Sbjct: 430 VDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNA 489
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L ++Y+ W +A ++ K ++ G++K G SW++++ KV+ F D +PQ +
Sbjct: 490 GNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIE 549
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I+ + K+ +E+K G+VP T VL+D++E+ KE+++ HSEKLA+AFGLI+T + T+
Sbjct: 550 EIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETI 609
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RI KNLR+C DCH+ KFI K +REI+VRD RFHHF+ G+CSC DYW
Sbjct: 610 RIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/508 (23%), Positives = 215/508 (42%), Gaps = 90/508 (17%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFY------- 58
P S +S L A+L+ + N + L +K LHL N +
Sbjct: 30 PVSFVS-LNPSANLINDINSNNNQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYSC 88
Query: 59 AKTESISYAKKV--------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
A+ S+SY V FD+ P +++ Y + G +D A +VF+ R
Sbjct: 89 AQKNSLSYGLDVHRCLVDSGFDQDPFLA----TKLINMYYELGSIDRALKVFDETRERTI 144
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT----ALGDLSAGKK 166
W + +G K + ++++M +FT T VL +C ++ L GK+
Sbjct: 145 YVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKE 204
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+H+ +++ G ++V +LL++YAK G A +VF M KN
Sbjct: 205 IHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNF--------------- 249
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK-PDKFTLASTL 285
V+W++MIA +++N +AL +F M+ ++ P+ T+ + L
Sbjct: 250 ----------------VSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNML 293
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
ACA L L+ GK IH YI+R + D+ PV NALI+ Y + G V + Q
Sbjct: 294 QACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQ------------ 341
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
R+FD+++ RDVV+W +++ Y +G K A+++F +M+
Sbjct: 342 ---------------------RVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIH 380
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA-SSLSVSNALITMYSKAGNIN 464
+G P+ + +L S ++ GK + S L + ++ + +A +
Sbjct: 381 QGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLG 440
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQH 492
A ++ +H+ W S++ + H
Sbjct: 441 EAIKLIEDMHFEPGPTVWGSLLGSCRIH 468
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 145/311 (46%), Gaps = 44/311 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I++ G ++ + +L++ YAK S+SYA VF MP K SW+ +++ +AK
Sbjct: 202 GKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAK 261
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
A E+F LM MF +P T+ ++
Sbjct: 262 NEMPMKALELFQLM--------------------------MFEAC---NSVPNSVTMVNM 292
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L L GK +H ++++ L + V N+L+ MY + G+ +M + VFD M+ ++V
Sbjct: 293 LQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDV 352
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
SWN ++S++ G A F+ MI + V +++ +++ S G E +F +
Sbjct: 353 VSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFES 412
Query: 268 MLKDSSLKP--DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV--GNALISCY 323
ML + P + + L AN +LG+ I +I GP G+ L SC
Sbjct: 413 MLSKYRIHPGMEHYACMVDLLGRAN----RLGEAIK--LIEDMHFEPGPTVWGSLLGSCR 466
Query: 324 AKVGGVEIAQK 334
VE+A++
Sbjct: 467 IHC-NVELAER 476
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 23/259 (8%)
Query: 390 NGLNKDAVELFRSMVREG------------PKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
N +N + +L +S+ + G P P T ++ + SL +G +H
Sbjct: 44 NDINSNNNQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRC 103
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQHGLGE 496
+ SG ++ LI MY + G+I+ A +VF+ R+ T+ W ++ ALA G G+
Sbjct: 104 LVDSGFDQDPFLATKLINMYYELGSIDRALKVFD--ETRERTIYVWNALFRALAMVGHGK 161
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGL----VEQGQRYYNMMKNVHKIKPTPSH 552
E + L+ +M +G D TY VL AC L + +G+ + + H +
Sbjct: 162 ELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILR-HGYEANIHV 220
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+++D+ + G + A + MP + + V+W +++ AC + + + +L++ E
Sbjct: 221 MTTLLDVYAKFGSVSYANSVFCAMPTK-NFVSWSAMI-ACFAKNEMPMKALELFQLMMFE 278
Query: 613 PDNSGAYS-ALCNLYSSCG 630
NS S + N+ +C
Sbjct: 279 ACNSVPNSVTMVNMLQACA 297
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/757 (32%), Positives = 402/757 (53%), Gaps = 105/757 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GKL H R+ + + + F+ N ++ Y +S + A++ FD++ + L SW+TI+SAY +
Sbjct: 111 GKLFHNRLQRMA-NSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTE 169
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+GR+D A+R+F+ M+ + P +++
Sbjct: 170 EGRID-------------------------------EAVRLFLRMLDLGITPNSSIFSTL 198
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ S T L GK++HS +++ G + +++ + NMY K G
Sbjct: 199 IMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCG----------------- 241
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
W LD A ++M ++ V ++ GY++ + +AL +F M+ +
Sbjct: 242 --W------------LDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISE 287
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ D F + L ACA L L GKQIH+Y I+ ++ VG L+
Sbjct: 288 -GVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLV----------- 335
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D Y+K AR+ F+S+ + + +W+A++ GY Q+G
Sbjct: 336 ----------------------DFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSG 373
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
A+E+F+++ +G N++ + + S+++ L G QIHA A++ G + LS +
Sbjct: 374 QFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGES 433
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
A+I+MYSK G ++ A + F I + +TV+WT++I A A HG EA++LF+ M G++
Sbjct: 434 AMISMYSKCGQVDYAHQAFLTID-KPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVR 492
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+ +T++G+L AC+H GLV++G++ + M + + + PT H+ M+D+ RAGLLQEA
Sbjct: 493 PNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALE 552
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I ++P EPDV++W SLL C H+NL++G IAA+ + ++P +S Y + NLY+ GK
Sbjct: 553 VIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGK 612
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI---WDE 688
W++AA RK M ++K SW+ ++ KVH F V D HPQ + IY+K+ ++ + +
Sbjct: 613 WDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKK 672
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
KE + A L D E KEQ+L HSE+LAIA+GLI T +T + + KN R C DC
Sbjct: 673 SKERLLNEENA--LCDFTER-KEQLL-DHSERLAIAYGLICTAADTPIMVFKNTRSCKDC 728
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H K + + RE+VVRD RFHH G CSCRDYW
Sbjct: 729 HDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 167/384 (43%), Gaps = 75/384 (19%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ GK +H+ IK GL V + L++FY K A++ F+ + SW+ +++ Y
Sbjct: 310 YTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGY 369
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ G+ D A EVF AIR VL F T
Sbjct: 370 CQSGQFDRALEVF-------------------------KAIR------SKGVLLNSFIYT 398
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ +C+A+ DL G ++H+ +K GL ++ +++++MY+K
Sbjct: 399 NIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKC---------------- 442
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
G++D A F + + D V W ++I ++ +G FEAL +F M
Sbjct: 443 ---------------GQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEM- 486
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG--NALISCYAKVG 327
+ S ++P+ T L+AC++ +K GK+I + E+ + N +I Y++ G
Sbjct: 487 QGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDS-MSDEYGVNPTIDHYNCMIDVYSRAG 545
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGY-----IKIGDIGPARRIFDSLRDRDVVAWTA 382
++ A +++ +V+++ +LL G ++IG I A IF L D +
Sbjct: 546 LLQEALEVIRSLPFE-PDVMSWKSLLGGCWSHRNLEIGMIA-ADNIF-RLDPLDSATYVI 602
Query: 383 MLVGYEQNGLNKDAVELFRSMVRE 406
M Y G +A + FR M+ E
Sbjct: 603 MFNLYALAGKWDEAAQ-FRKMMAE 625
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/640 (36%), Positives = 359/640 (56%), Gaps = 67/640 (10%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
++ S L CT+L +L K++ +F +KT L + + L+N +
Sbjct: 28 SLLSCLPKCTSLKEL---KQIQAFSIKTHLQNDLQILTKLINSCTQ-------------- 70
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+ + +D A F+ + + D+V +NSM GYS++ +A+ +F
Sbjct: 71 --------------NPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFI 116
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
L + +L PD +T S L AC + + GKQ+H I+ +
Sbjct: 117 KAL-NYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNE--------------- 160
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
N TL++ Y D+ A+R+FD + + VV++ A++ G
Sbjct: 161 ------------------NPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITG 202
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y ++ +A+ LFR + KPN+ T+ ++LS + L +LD GK IH ++G
Sbjct: 203 YARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKY 262
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V+ ALI MY+K G+++ A VF + R +T +W++MIVA A HG G++ + +FE M
Sbjct: 263 VKVNTALIDMYAKCGSLDGAISVFESMSVR-DTQAWSAMIVAYAMHGQGQDVMSMFEEMA 321
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
++PD IT++G+L AC+H GLV++G RY+ M V+ I P H+ MVDLLGRAGLL
Sbjct: 322 RAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLL 381
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EAY FI+ +P++P + W +LLS+C H NL+L K ++L ++ + G Y L NL
Sbjct: 382 HEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLC 441
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ GKWED +RK M + G K G S +++ N VH F D +H A++ + ++
Sbjct: 442 ARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELV 501
Query: 687 DEIKEMGFVPDTASVLH-DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVC 745
E+K +G+VPDT+ V+H D+E++ KE LR+HSEKLAI+FGL++TP TT+R++KNLRVC
Sbjct: 502 KELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVC 561
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHSA K I L+DREI++RD RFHHFK G CSC DYW
Sbjct: 562 GDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 181/415 (43%), Gaps = 66/415 (15%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+D A ++F +P D V + ++ Y+ AI +F++ + +LP +T S+L +
Sbjct: 77 MDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKA 136
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C GK++H +K GL+ V +L+NMYA D A+ VFD + V S+
Sbjct: 137 CVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSY 196
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N + I GY+++ EAL +F L+ L
Sbjct: 197 NAI-------------------------------ITGYARSSRPNEALSLF-RQLQARKL 224
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
KP+ T+ S LS+CA L L LGK IH Y+ + D V ALI YAK G
Sbjct: 225 KPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGS------ 278
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
LDG I +F+S+ RD AW+AM+V Y +G +
Sbjct: 279 ------------------LDGAIS---------VFESMSVRDTQAWSAMIVAYAMHGQGQ 311
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSVSNAL 453
D + +F M R +P+ T +L S +D G + ++ + G + +
Sbjct: 312 DVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCM 371
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ + +AG ++ A + + + + + W +++ + + HG E A Q+ ++LEL
Sbjct: 372 VDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILEL 426
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 38/311 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H IK GL+ + ++ +L+N YA + A++VFDE+
Sbjct: 146 GKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEI----------------- 188
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
L P VS+ II Y R A+ +F ++ ++ P TV SV
Sbjct: 189 ------------LEPC--VVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSV 234
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L+SC LG L GK +H +V K GL V V +L++MYAK G A +VF+ M +++
Sbjct: 235 LSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDT 294
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+W+ ++ + G+ + F++M ++ D +T+ ++ S G E F +
Sbjct: 295 QAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYS 354
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + + P + L + L + + +I T + L+S + G
Sbjct: 355 MSEVYGIIPGIKHYGCMVDL---LGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHG 411
Query: 328 GVEIAQKIVEQ 338
+E+A++++ Q
Sbjct: 412 NLELAKQVMNQ 422
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 33/213 (15%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + K GL V + +L++ YAK S+ A VF+ M V+ +W+ ++ AYA
Sbjct: 246 LGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYA 305
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G+ ++ + MF EM + +V P + T
Sbjct: 306 MH-------------------------------GQGQDVMSMFEEMARAKVQPDEITFLG 334
Query: 151 VLASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L +C+ G + G + +S G+ + ++++ + G A D + +K
Sbjct: 335 LLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIK 394
Query: 210 NVSS-WNVVVSLHIHSGRLDLARAQFDQMIERD 241
W ++S G L+LA+ +Q++E D
Sbjct: 395 PTPILWRTLLSSCSSHGNLELAKQVMNQILELD 427
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/651 (37%), Positives = 355/651 (54%), Gaps = 75/651 (11%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+++ VLP++ + + +L SC G+ G+ H ++K G + + LL+ YAKVGD
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
AK VF GM RDVV N+MI+ S++
Sbjct: 61 LKCAKRVFMGMP-------------------------------RRDVVANNAMISALSKH 89
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
GY EA +F NM + +S
Sbjct: 90 GYVEEARNLFDNMTERNSCS---------------------------------------- 109
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD- 374
N++I+CY K+G + A+ + + + + +V+++ ++DGY K + A+ +F +
Sbjct: 110 WNSMITCYCKLGDINSARLMFDCNPVK--DVVSWNAIIDGYCKSKQLVAAQELFLLMGSA 167
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
R+ V W M+ Y Q G A+ +F+ M E KP T+ ++LS + L +LD G+ I
Sbjct: 168 RNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWI 227
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H + + NALI MY K G + AA VF+ + R+ W S+IV L +G
Sbjct: 228 HGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS-RKNIFCWNSIIVGLGMNGR 286
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
GEEAI F M + GIKPD +T+VG+L+ C+H GL+ GQRY++ M V+ ++P H+
Sbjct: 287 GEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYG 346
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDLLGRAG L+EA I MP++P+ + GSLL AC++HK+ LG+ ++LL ++P
Sbjct: 347 CMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPC 406
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+ G Y L NLY+S +W+D RK M GV KT G S +++ N VH F D HPQ
Sbjct: 407 DGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQ 466
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
I + +I E+K G VP+TA+VLHD+EE+ KE +R+HSE++A+AFGL+STP
Sbjct: 467 FTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGK 526
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+R++KNLR C+DCHSA+K I REI+VRD RFHHF+ G CSC DYW
Sbjct: 527 TIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 146/286 (51%), Gaps = 37/286 (12%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN-RDS 110
NS++ Y K I+ A+ +FD PVK + SWN I+ Y K +L A E+F LM + R+S
Sbjct: 111 NSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNS 170
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
V+W T+I Y + G F AI MF +M + V PT+ T+ S+L++C LG L G+ +H +
Sbjct: 171 VTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGY 230
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
+ L V + N+L++MY K G A VF G+ KN+ WN ++ +GR + A
Sbjct: 231 IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEA 290
Query: 231 RAQFDQM----IERDVVTWNSMIAGYSQNG-------YDFEALGMF-------------- 265
A F M I+ D VT+ +++G S +G Y E LG++
Sbjct: 291 IAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVD 350
Query: 266 ----ANMLKDS-------SLKPDKFTLASTLSACANLEKLKLGKQI 300
A LK++ +KP+ L S L AC + KLG+Q+
Sbjct: 351 LLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQV 396
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +++S L AHL ++ G+ +H I L + V L N+L++ Y K +
Sbjct: 203 PTEVTMVSLLSACAHLGALDM-------GEWIHGYIRTKRLKIDVVLGNALIDMYCKCGA 255
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A VF + K + WN +IIV
Sbjct: 256 LEAAIDVFHGLSRKNIFCWN-------------------------------SIIVGLGMN 284
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNV 182
GR + AI F+ M ++ + P T +L+ C+ G LSAG++ S ++ GL V
Sbjct: 285 GRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEH 344
Query: 183 TNSLLNMYAKVG 194
++++ + G
Sbjct: 345 YGCMVDLLGRAG 356
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 375/639 (58%), Gaps = 19/639 (2%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+ TS+ + + LS+ + LS C ++ N LL ++A++ + G
Sbjct: 30 SFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHL-NPLLQIHAQI--------IVSG- 79
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
K+ S +++L+ + DLAR+ FD + WNSMI Y+++ EAL M+
Sbjct: 80 -FKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYY 138
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M++ L+ D F A + + + LK +++ + + + A NA+I+ ++
Sbjct: 139 CMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA----WNAMIAGLSQS 194
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+A+++ +Q + + +++ T++ GY G +FD ++ +V W ++
Sbjct: 195 EDPYVARRVFDQ--MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVT-WNVIIAA 251
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QNG K+A+ F M E PN+ T ++L ++ LA+ G HA ++ G S+
Sbjct: 252 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN 311
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V N+LI MY+K G ++ + ++FN + ++TVSW +M+ A HG G+ AI LF M
Sbjct: 312 TLVGNSLIDMYAKCGQLDYSEKLFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQ 370
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
E ++ D +++V VL+AC H GLVE+G++ ++ M + + IKP H+A MVDLLGRAGL
Sbjct: 371 ESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLF 430
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
E FI+ MP+EPD WG+LL +CR+H N+ LG++A + L+ +EP N + L ++Y
Sbjct: 431 DETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIY 490
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ G+W DA R M +G+KKT G SWV+++NKVH F V D HPQ ++++ +
Sbjct: 491 AQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLL 550
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
++++++G+VPD + VL +VEE+ KE L HSE+LAI F L++TP +T++I+KNLRVC
Sbjct: 551 EKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCA 610
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+ KFI K+ R I+VRDATRFHHF+ G+CSC DYW
Sbjct: 611 DCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 207/515 (40%), Gaps = 134/515 (26%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+++ Y+ + DLA VF+ PN + W ++I Y ++ A+ M+ MV+
Sbjct: 89 LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVE------ 142
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
K GL V + L++MY+K+GD A+ VFD
Sbjct: 143 ----------------------------KGGLERDVFIGAGLVDMYSKMGDLKRAREVFD 174
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M ++V +WN +++ S +AR FDQM+++D V+W +M+AGY+ NG E L +
Sbjct: 175 KMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLEL 234
Query: 265 FANM-----------------------------LKDSSLKPDKFTLASTLSACANLEKLK 295
F M ++ + P+ T S L A A L +
Sbjct: 235 FDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFR 294
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
G HA II+ F + VGN+LI YAK G ++ ++K
Sbjct: 295 EGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK--------------------- 333
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
+F+ + +D V+W AML GY +G A+ LF M + ++ +
Sbjct: 334 ------------LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSF 381
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
++LS ++ G++I S + + H
Sbjct: 382 VSVLSACRHAGLVEEGRKIFHS-------------------------------MSDKYHI 410
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ + + M+ L + GL +E + + M ++PD + +L +C V+ G+
Sbjct: 411 KPDLEHYACMVDLLGRAGLFDETLGFIKVM---PVEPDAGVWGALLGSCRMHSNVKLGEV 467
Query: 536 YYNMMKNVHKIKP-TPSHFASMVDLLGRAGLLQEA 569
+ ++ K++P P+HF + + ++G +A
Sbjct: 468 ---ALDHLVKLEPRNPAHFVVLSSIYAQSGRWADA 499
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 42/311 (13%)
Query: 3 TPNPPSLI--SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
TPNP ++ S + Y Q N ++ + + K GL VF+ L++ Y+K
Sbjct: 109 TPNPSRILWNSMIRAYTRSKQYNEAL------EMYYCMVEKGGLERDVFIGAGLVDMYSK 162
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTT----- 115
+ A++VFD+MP + + +WN +++ ++ +A VF+ M ++D VSW T
Sbjct: 163 MGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGY 222
Query: 116 -------------------------IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
II Y + G K AI F +M + P T S
Sbjct: 223 AHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVS 282
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + L G H+ +++ G V NSL++MYAK G ++ +F+ M K+
Sbjct: 283 VLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKD 342
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
SWN ++S + G D A A F M ++ D V++ S+++ G E +F
Sbjct: 343 TVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFH 402
Query: 267 NMLKDSSLKPD 277
+M +KPD
Sbjct: 403 SMSDKYHIKPD 413
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 375/640 (58%), Gaps = 5/640 (0%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N +++ + ++ A+K+FDEMP SW ++S + K GR+ + F P ++ V
Sbjct: 91 NCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVV 150
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SWT I Y + G A+++F+++++ +V P + T TSV+ +C LGD G V +
Sbjct: 151 SWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLI 210
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
VKTG + V+NSL+ + ++G+ +A+ VFD M K+V SW ++ L++ L AR
Sbjct: 211 VKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEAR 270
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M +R+ V+W++MIA Y Q+GY E+L +F M+++ KP+ +S LSA A++
Sbjct: 271 RIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEG-FKPNISCFSSILSALASV 329
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
E L+ G IH ++ + F+ V ++LI Y K G + + + + I N++++
Sbjct: 330 EALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDT--ILEKNMVSWNA 387
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
++ GY G + A+ +F+ + R+ V+W+A++ G+ + E+F M+ G PN
Sbjct: 388 MVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPN 447
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
T S++L +S ASLD GK +H ++ G V AL MY+K+G+I ++++VFN
Sbjct: 448 KSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFN 507
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLV 530
+ + E VSWT+MI LA+ GL EE++ LFE M + I P+ + ++ VL AC+H GLV
Sbjct: 508 RMPKKNE-VSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLV 566
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
++G Y+N M+ V+ +KP HF +VD+L RAG L EA FI +MP +P+ AW +LLS
Sbjct: 567 DKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLS 626
Query: 591 ACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKT 650
C+ +KN +L + A KL + N Y L N+Y+S G+W D +RK MK G+KK+
Sbjct: 627 GCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKS 686
Query: 651 QGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
G SWV+I+++VH F ED H Q IY + + E+K
Sbjct: 687 GGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 259/533 (48%), Gaps = 84/533 (15%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV---F 203
T S+L + T G + G +H+ + KTG+S ++ LL MY A + F
Sbjct: 23 TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE------------------------ 239
DG ++ N ++S ++ G LD AR FD+M +
Sbjct: 83 DGF---DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMW 139
Query: 240 -------RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
++VV+W + I+GY QNG+ EA+ +F +L +S +KP+K T S + ACANL
Sbjct: 140 YFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLL-ESEVKPNKVTFTSVVRACANLG 198
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
LG + I++T ++ V N+LI+ ++G + +A+++ ++ + +V+++T +
Sbjct: 199 DFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDR--MEEKDVVSWTAI 256
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
LD Y+++ ++G ARRIFD + R+ V+W+AM+ Y Q+G ++++ LF M++EG KPN
Sbjct: 257 LDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNI 316
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
S++LS +S+ +L G IH + G + VS++LI MY K G R +F+
Sbjct: 317 SCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDT 376
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEA-------------------------------IQL 501
I + VSW +M+ + +G EEA ++
Sbjct: 377 I-LEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEV 435
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDL 559
F M+ LG P+ T+ +L AC +++G+ N+ + K+ + ++ D+
Sbjct: 436 FNEMILLGEIPNKSTFSSLLCACASTASLDKGK---NLHGKIVKLGIQCDTYVGTALTDM 492
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
++G ++ + MP + + V+W +++ + L +A E L L E
Sbjct: 493 YAKSGDIESSKKVFNRMP-KKNEVSWTAMI------QGLAESGLAEESLTLFE 538
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 228/483 (47%), Gaps = 36/483 (7%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G V I+K G + + NSL+ + I A++VFD M K + SW IL Y
Sbjct: 202 LGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYV 261
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ L A +F+ MP R+ VSW+ +I Y + G + ++R+F M+Q+ P +S
Sbjct: 262 EMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSS 321
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L++ ++ L AG +H V K G V V++SL++MY K G+ + +FD + KN
Sbjct: 322 ILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKN 381
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ SWN +V + +G ++ A+ F+ M R+ V+W+++IAG+ E +F M+
Sbjct: 382 MVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMIL 441
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ P+K T +S L ACA+ L GK +H I++ VG AL YAK G
Sbjct: 442 LGEI-PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSG--- 497
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
DI ++++F+ + ++ V+WTAM+ G ++
Sbjct: 498 ------------------------------DIESSKKVFNRMPKKNEVSWTAMIQGLAES 527
Query: 391 GLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGK-QIHASALRSGEASSLS 448
GL ++++ LF M + PN A+L S +D G ++ G
Sbjct: 528 GLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGR 587
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ M S+AG + A + ++ ET +W +++ + E A ++ ++ E+
Sbjct: 588 HFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEM 647
Query: 509 GIK 511
K
Sbjct: 648 AEK 650
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/662 (35%), Positives = 370/662 (55%), Gaps = 66/662 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
++L Y K G ++ A +FN + V W ++V + +I + +F +M +
Sbjct: 283 GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P QFT +L +CT ++ G+++HS VKTG + V+ L++MY+K G
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYG-------- 394
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
W L+ AR + + E+DVV+W SMIAGY Q+ +AL
Sbjct: 395 -----------W------------LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDAL 431
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
F M K + PD LAS +S CA + ++ G QIHA I + + + NAL++
Sbjct: 432 AAFKEMQK-CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNL 490
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G +I E AF++ F+ + +D +
Sbjct: 491 YARCG------RIRE----------AFSS-----------------FEEMELKDGITGNG 517
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G+ Q+GL+++A+++F M + G K N +T + LS S++LA + GKQIHA +++G
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ V NALI++Y K G+ A+ F+ + R E VSW ++I + +QHG G EA+ LF
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNE-VSWNTIITSCSQHGRGLEALDLF 636
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + GIKP+ +T++GVL AC+H GLVE+G Y+ M + + I+P P H+A ++D+ GR
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG L A FIE MP+ D + W +LLSAC+VHKN+++G+ AA+ LL +EP +S +Y L
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N Y+ KW + +RK M+ GV+K G SW++++N VH F V D LHP + IYN +
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
A I D + ++G+ + + HD E++ ++ HSEKLA+ FGL+S P LR++KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876
Query: 743 RV 744
RV
Sbjct: 877 RV 878
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 244/505 (48%), Gaps = 69/505 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y+K G + A VF + RD+VSW ++ Y + G + A+ ++ +M + V+
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + ++SVL+SCT + G+ +H+ K G + V N+++ +Y + G +A+ V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F M ++ ++N ++S G++Q G+ AL
Sbjct: 201 FCDMPHRDTVTFNTLIS-------------------------------GHAQCGHGEHAL 229
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + S L PD T++S L+ACA+L L+ G Q+H+Y+ + + + +L+
Sbjct: 230 EIFEEM-QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL 288
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G VE T L+ IF+S +VV W
Sbjct: 289 YVKCGDVE-------------------TALV--------------IFNSSDRTNVVLWNL 315
Query: 383 MLVGYEQ-NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
MLV + Q N L K + ELF M G +PN +T +L + +D G+QIH+ ++++
Sbjct: 316 MLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKT 374
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S + VS LI MYSK G + ARRV ++ ++ VSWTSMI QH ++A+
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLK-EKDVVSWTSMIAGYVQHECCKDALAA 433
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + GI PD+I ++ C + QG + + + V S + ++V+L
Sbjct: 434 FKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI-YVSGYSGDVSIWNALVNLYA 492
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWG 586
R G ++EA++ E M L+ + G
Sbjct: 493 RCGRIREAFSSFEEMELKDGITGNG 517
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 213/435 (48%), Gaps = 44/435 (10%)
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
+V E+ AKAV G+ + N+++ L+ +G + AR F+++ RD V+W +M++G
Sbjct: 59 QVVPEIHAKAVTRGLGKYRIVG-NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSG 117
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y+QNG EALG++ M + + + P + L+S LS+C E G+ IHA + F +
Sbjct: 118 YAQNGLGEEALGLYRQMHR-AGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCS 176
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
VGNA+I+ Y + G +A+++ + + + + F TL+ G+
Sbjct: 177 EIFVGNAVITLYLRCGSFRLAERVF--CDMPHRDTVTFNTLISGHA-------------- 220
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
Q G + A+E+F M G P+ T+S++L+ +SL L G
Sbjct: 221 -----------------QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
Q+H+ ++G +S + +L+ +Y K G++ A +FN R V W M+VA Q
Sbjct: 264 TQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-RTNVVLWNLMLVAFGQ 322
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
++ +LF +M GI+P+ TY +L CT ++ G++ +++ K
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV---KTGFESD 379
Query: 552 HFAS--MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD--LGKIAAEK 607
+ S ++D+ + G L++A +E M E DVV+W S+++ H+ L +
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438
Query: 608 LLLIEPDNSGAYSAL 622
I PDN G SA+
Sbjct: 439 KCGIWPDNIGLASAI 453
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 214/485 (44%), Gaps = 98/485 (20%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P +F Y +L++ +R +G+ +H+ +K G +++ L++ Y+K + A+
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR 400
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+V + + K + SW ++++ Y + C K+
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHE----CC---------------------------KD 429
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ F EM + + P + S ++ C + + G ++H+ + +G SG V++ N+L+N
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+YA+ G R+ A + F++M +D +T N +
Sbjct: 490 LYARCG-------------------------------RIREAFSSFEEMELKDGITGNGL 518
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
++G++Q+G EAL +F M S +K + FT S LSA ANL ++K GKQIHA +I+T
Sbjct: 519 VSGFAQSGLHEEALKVFMRM-DQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTG 577
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
VGNALIS Y K G E A+
Sbjct: 578 HSFETEVGNALISLYGKCGSFE---------------------------------DAKME 604
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F + +R+ V+W ++ Q+G +A++LF M +EG KPN+ T +L+ S + +
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 429 DHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
+ G S + G +I ++ +AG ++ A++ + + + W +++
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 488 ALAQH 492
A H
Sbjct: 725 ACKVH 729
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 321/545 (58%), Gaps = 37/545 (6%)
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSS-LKPDKFTLASTLSACANLEKLKLGKQIHA 302
++ S + N +A+ +N +S+ L P AS L +C + +K GKQ+HA
Sbjct: 40 SFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ C A G + VIA T L++ Y +
Sbjct: 100 QV-----------------CLA---------------GFGFDTVIA-TKLVNLYCVCDSL 126
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
AR +FD + ++ W ++ GY NG + AV+L+ M G P+N+T +L
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET--V 480
++L++++HG++IH +++G + V ALI MY+K G + +AR VF+ I R V
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVV 246
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SW +MI A HG EA+ LFE M + KPDHIT+VGVL+AC+HGGL+E+G ++ M
Sbjct: 247 SWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETM 305
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+KI PT H+ MVDLLG +G L EAYN I M + PD WG+LL++C++H N++L
Sbjct: 306 IRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVEL 365
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G+IA E+L+ +EPD++G Y L N+Y+ GKWE A +RK M +KK+ SW++++N
Sbjct: 366 GEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKN 425
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KVH F D HP D IY+++ ++ +KE G+ P T SV HDVE+D K M+ HSE+
Sbjct: 426 KVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSER 485
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIAFGLISTP T L I KNLR+C DCH AIKFI K+ +REI VRD R+HHFK G+CS
Sbjct: 486 LAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCS 545
Query: 781 CRDYW 785
C DYW
Sbjct: 546 CGDYW 550
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 163/378 (43%), Gaps = 78/378 (20%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT S+L SC A + GK++H+ V G + L+N+Y V D + +
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC-VCDSLSS--- 128
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
AR FD++ + ++ WN +I GY+ NG A+
Sbjct: 129 ---------------------------ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAV 161
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ M D L PD FT L ACA L ++ G++IH ++++T ++ VG ALI
Sbjct: 162 QLYYQMF-DYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDM 220
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD---VVA 379
YAK G V G AR +FD + RD VV+
Sbjct: 221 YAKCGCV---------------------------------GSAREVFDKILVRDAVLVVS 247
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W AM+ GY +G +A++LF M R KP++ T +LS S L+ G + +
Sbjct: 248 WNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMI 306
Query: 440 RSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LG 495
R + ++ ++ + +G ++ A + + ++ W +++ + H LG
Sbjct: 307 RDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELG 366
Query: 496 EEAIQLFERMLELGIKPD 513
E A+ ER++EL +PD
Sbjct: 367 EIAL---ERLIEL--EPD 379
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 143/324 (44%), Gaps = 62/324 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA LLQS + + GK +HA++ G + L+N Y +S+S A+ +FD +P
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ WN ++ YA W G ++ A++++ +
Sbjct: 138 KHNIFLWNVLIRGYA----------------------WN---------GPYEAAVQLYYQ 166
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++P FT VL +C AL + G+++H VV+TG V V +L++MYAK G
Sbjct: 167 MFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGC 226
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ VFD + +++ V+V V+WN+MI GY+ +
Sbjct: 227 VGSAREVFDKILVRDA----VLV------------------------VSWNAMITGYAMH 258
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGP 314
G+ EAL +F M + KPD T LSAC++ L+ G +IR + D T
Sbjct: 259 GHATEALDLFEEM--NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQ 316
Query: 315 VGNALISCYAKVGGVEIAQKIVEQ 338
++ G ++ A ++ Q
Sbjct: 317 HYTCMVDLLGHSGRLDEAYNLIMQ 340
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/783 (32%), Positives = 423/783 (54%), Gaps = 73/783 (9%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P E+ + +L + +++ + +G VH ++K GL VF+ N+LM Y K
Sbjct: 192 IEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKC------- 244
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
G LDL +F MP RD SW T+I + + ++
Sbjct: 245 ------------------------GFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280
Query: 129 AIRMFVEMVQDQVLPT-QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A F M + L F+++++L +C G+++H+ +K GL ++V++SL+
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
Y K G +F+ M +++V +W +++ ++ G LD A F++M +R+ +++N+
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
++AG S+N AL +F ML++ ++ TL S ++AC L+ K+ +QI ++++
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEG-VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKF 459
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
G + N+ I T L+D Y + G + A +
Sbjct: 460 -----GILSNSCIE----------------------------TALVDMYTRCGRMEDAEK 486
Query: 368 IF--DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS-AMLSVSSS 424
IF SL + T+M+ GY +NG +A+ LF S EG + +S ++LS+ S
Sbjct: 487 IFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGS 546
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+ + G Q+H AL+SG + V NA ++MYSK N++ A RVFN ++ Q+ VSW
Sbjct: 547 IGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN-MQDIVSWNG 605
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG--GLVEQGQRYYNMMKN 542
++ H G++A+ ++++M + GIKPD IT+ +++A H LV+ + + M+
Sbjct: 606 LVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
H IKPT H+AS + +LGR GLL+EA I NMPLEPDV W +LL++CR++KN L K
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEK 725
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AA +L +EP + +Y NLYS+ G+W + +R+ M+ G +K SW+ +NK+
Sbjct: 726 LAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKI 785
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F D HPQ IY+ + + E ++G+VPDT+ VL +VEE K++ L +HS KLA
Sbjct: 786 HSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLA 845
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
FG++ T ++I+KN+R+C DCH+ +K++ + R+I++RD + FH F G CSC
Sbjct: 846 ATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCT 905
Query: 783 DYW 785
DYW
Sbjct: 906 DYW 908
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/590 (24%), Positives = 263/590 (44%), Gaps = 74/590 (12%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
++ SP + LL+ + + +P + + VHA+ +K L +FL N+L++ Y K + A
Sbjct: 96 TIASPFD----LLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDA 149
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
KVF + + S+ ++S ++K D
Sbjct: 150 DKVFSGLSCPNVVSYTALISGFSKSDWED------------------------------- 178
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+ +F M+ + P ++T ++L +C D G +VH VVK GL CV + N+L+
Sbjct: 179 EAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALM 238
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+Y K G + +F+ M ++++SWN V+S + + D
Sbjct: 239 GLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD------------------- 279
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
EA F M LK D F+L++ L+ACA K G+Q+HA ++
Sbjct: 280 ------------EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKV 327
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
++ V ++LI Y K G + E I +VI +T ++ Y++ G + A
Sbjct: 328 GLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIR--DVITWTGMITSYMEFGMLDSAVE 385
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
+F+ + R+ +++ A+L G +N A+ELF M+ EG + ++ TL+++++ L S
Sbjct: 386 VFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKS 445
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE-TVSWTSMI 486
+QI ++ G S+ + AL+ MY++ G + A ++F + T TSMI
Sbjct: 446 FKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMI 505
Query: 487 VALAQHGLGEEAIQLFER-MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
A++G EAI LF E I D + +L+ C G E G + +
Sbjct: 506 CGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGL 565
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
I T A+ V + + + +A M ++ D+V+W L++ +H
Sbjct: 566 ITETGVGNAT-VSMYSKCWNMDDAVRVFNTMNMQ-DIVSWNGLVAGHVLH 613
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/707 (33%), Positives = 393/707 (55%), Gaps = 40/707 (5%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQV 141
N ++S YAK A ++FN +P RD SW TII + + A R+F M D
Sbjct: 204 NALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAF 263
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
FT++ +L TA L G++VH+ VK GL +NV N L+ Y+K G+ +
Sbjct: 264 RVDDFTLSILL---TASASLMEGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEW 320
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F+GMR+++V +W +V+ ++ G ++LA FD+M E++ V++N+++AG+ +N FEA
Sbjct: 321 LFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEA 380
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ +F M+++ L+ F+L S + AC L K+ KQ+H + ++ F + G V AL+
Sbjct: 381 MRLFVRMVEEG-LELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLD 439
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y + G + A K+ + L + V WT
Sbjct: 440 MYTRCGRMVDAGKMFLRW-------------------------------ELEEFSSVVWT 468
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA-MLSVSSSLASLDHGKQIHASALR 440
AM+ GY +NG ++A+ LF +G + +A ML + ++ LD GKQIH ++
Sbjct: 469 AMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIK 528
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G +L V NA+++MY K G+++ A +VF + + V+W ++I H G+ A++
Sbjct: 529 CGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPC-TDIVTWNTLISGNLMHRQGDRALE 587
Query: 501 LFERMLELGIKPDHITYVGVLTAC--THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
++ ML GIKP+ +T+V +++A T+ LV+ + +N M+ V++I+PT H+AS +
Sbjct: 588 IWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFIS 647
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
+LG GLLQEA I NMP +P + W LL CR+HKN +GK AA+ +L +EP +
Sbjct: 648 VLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPST 707
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
+ + NLYS+ G+W+ + +R+ M+ G +K SW+ + K++ F D HPQ I
Sbjct: 708 FILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDI 767
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+ + E ++G+ PDT+ VLH+VEE K+ L HHS KLA +G++ T +RI
Sbjct: 768 QRGLEILILECLKIGYEPDTSFVLHEVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRI 827
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KN+ +C DCH+ +K+ + R+I +RD++ FH F G CSC+D W
Sbjct: 828 VKNILLCGDCHAFLKYASIVTKRDIFLRDSSGFHCFSNGQCSCKDCW 874
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 260/527 (49%), Gaps = 55/527 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQV 141
N ++S Y K A +F +P+ + VS+TT+I ++ R +A+ +F+ M + +
Sbjct: 102 NALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLI-SFLSKHRQHHALHLFLRMTTRSHL 160
Query: 142 LPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
P ++T +VL +C++L G ++H+ +KT V N+L+++YAK A
Sbjct: 161 PPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAAL 220
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+F+ + ++++SWN ++S A + YD
Sbjct: 221 KLFNQIPRRDIASWNTIIS------------------------------AALQDSLYD-T 249
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A +F NM + + D FTL+ L+A A+L + G+Q+HA+ ++ + VGN LI
Sbjct: 250 AFRLFRNMQATDAFRVDDFTLSILLTASASLME---GQQVHAHAVKLGLETDLNVGNGLI 306
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
Y+K G V+ + + E G+ +VI +T ++ Y++ G + A ++FD + +++ V++
Sbjct: 307 GFYSKFGNVDDVEWLFE--GMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSY 364
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+L G+ +N +A+ LF MV EG + +++L++++ L KQ+H A++
Sbjct: 365 NTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVK 424
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE---TVSWTSMIVALAQHGLGEE 497
G S+ V AL+ MY++ G + A ++F + W E +V WT+MI A++G EE
Sbjct: 425 FGFGSNGYVEAALLDMYTRCGRMVDAGKMF--LRWELEEFSSVVWTAMICGYARNGQPEE 482
Query: 498 AIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA-- 554
AI LF G + D + +L C G ++ G++ + H IK
Sbjct: 483 AIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIH-----CHVIKCGLGFNLEV 537
Query: 555 --SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
++V + + G + +A +MP D+V W +L+S +H+ D
Sbjct: 538 GNAVVSMYFKCGSVDDAMKVFGDMPC-TDIVTWNTLISGNLMHRQGD 583
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 184/389 (47%), Gaps = 62/389 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VHA +K GL + + N L+ FY+K ++ + +F+ M V+ + +W +++AY +
Sbjct: 283 GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYME 342
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++LA +VF+ MP ++SVS+ T++ + + A+R+FV MV++ + T F++TSV
Sbjct: 343 FGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSV 402
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C LGD K+VH F VK G V +LL+MY + G + A +F L+
Sbjct: 403 VDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEF 462
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SS V W +MI GY++NG EA+ +F D
Sbjct: 463 SS-----------------------------VVWTAMICGYARNGQPEEAIYLFHVGRSD 493
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ D+ AS L C + L +GKQIH ++I+ VGNA++S Y K G V+
Sbjct: 494 GKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDD 553
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A K +F + D+V W ++ G +
Sbjct: 554 AMK---------------------------------VFGDMPCTDIVTWNTLISGNLMHR 580
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLS 420
A+E++ M+ EG KPN T ++S
Sbjct: 581 QGDRALEIWVEMLGEGIKPNQVTFVLIIS 609
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 27/227 (11%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H +IKCGL ++ + N++++ Y K S+ A KVF +MP + +WNT++S
Sbjct: 518 MGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNL 577
Query: 91 KQGRLDLACEVF------NLMPNRDSVSWTTIIVTYNE--IGRFKNAIRMFVEM-VQDQV 141
+ D A E++ + PN+ V++ II Y + + + +F M Q+
Sbjct: 578 MHRQGDRALEIWVEMLGEGIKPNQ--VTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQI 635
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKV--------HSFVVKTGLSGCVNVTNSLLNMYAKV 193
PT S ++ G L + + V + L GC N L+ +A
Sbjct: 636 EPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWA-- 693
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
A+ + + K+ S++ +V +L+ SGR D + + M E+
Sbjct: 694 -----AQNIL-ALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREK 734
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/771 (34%), Positives = 415/771 (53%), Gaps = 109/771 (14%)
Query: 9 LISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYA 67
L+S Y+ Q LK G+ VH +I GL V + N L+N YAK SI+ A
Sbjct: 34 LLSSFPEYSLAEQVGLKK-----GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 88
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
++ VF M +DSVSW ++I ++ G F
Sbjct: 89 RR-------------------------------VFCFMMEKDSVSWNSMITGLDQNGCFI 117
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+ + M + ++LP FT+ S L+SC +L G+++H +K G+
Sbjct: 118 EAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID---------- 167
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
NVS N +++L+ +G L+ R F M E D V+WNS
Sbjct: 168 ---------------------LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 206
Query: 248 MIAGYSQNGYDF-EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+I + + EA+ F N L+ + K ++ T +S LSA ++L +LGKQIH ++
Sbjct: 207 IIGALASSERSLPEAVACFLNALR-AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK 265
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
NALI+CY K G ++ +K
Sbjct: 266 YNIADEATTENALIACYGKCGEMDGCEK-------------------------------- 293
Query: 367 RIFDSLRDR-DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
IF + +R D V W +M+ GY N L A++L M++ G + +++ + +LS +S+
Sbjct: 294 -IFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 352
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
A+L+ G ++HA ++R+ S + V +AL+ MYSK G ++ A R FN + R + SW SM
Sbjct: 353 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN-SYSWNSM 411
Query: 486 IVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
I A+HG GEEA++LF M L+ PDH+T+VGVL+AC+H GL+E+G +++ M + +
Sbjct: 412 ISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 471
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC-RVH-KNLDLGK 602
+ P HF+ M DLLGRAG L + +FI+ MP++P+V+ W ++L AC R + + +LGK
Sbjct: 472 GLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGK 531
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
AAE L +EP+N+ Y L N+Y++ G+WED RK MK VKK G+SWV +++ V
Sbjct: 532 KAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGV 591
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H+F D HP D IY K+ ++ ++++ G+VP T L+D+E++ KE++L +HSEKLA
Sbjct: 592 HMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLA 651
Query: 723 IAFGLISTPENT-TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
+AF L + +T +RIMKNLRVC DCHSA K+I K+ R+I++RD+ R+
Sbjct: 652 VAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRYE 702
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 233/552 (42%), Gaps = 120/552 (21%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +LIS L A L + L G+ +H +K G+ L+V + N+LM YA+T
Sbjct: 133 PGSFTLISSLSSCASLKWAKL-------GQQIHGESLKLGIDLNVSVSNALMTLYAETGY 185
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
++ +K+F MP SWN+I+ A A R +P +
Sbjct: 186 LNECRKIFSSMPEHDQVSWNSIIGALASSER---------SLP--------------EAV 222
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F NA+R ++ F+ S + G+L GK++H +K ++
Sbjct: 223 ACFLNALR-----AGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKYNIADEATTE 275
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+L+ Y K G+ + +F M + RD V
Sbjct: 276 NALIACYGKCGEMDGCEKIFSRMSER------------------------------RDDV 305
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
TWNSMI+GY N +AL + ML+ + + D F A+ LSA A++ L+ G ++HA
Sbjct: 306 TWNSMISGYIHNELLAKALDLVWFMLQ-TGQRLDSFMYATVLSAFASVATLERGMEVHAC 364
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+R ++ VG+AL+ Y+K G ++
Sbjct: 365 SVRACLESDVVVGSALVDMYSKCGRLDY-------------------------------- 392
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY-TLSAMLSVS 422
A R F+++ R+ +W +M+ GY ++G ++A++LF +M +G P ++ T +LS
Sbjct: 393 -ALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSAC 451
Query: 423 SSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S L+ G K + + G A + + + + +AG ++ + + + +
Sbjct: 452 SHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLI 511
Query: 482 WTSMIVALAQHG-----LGEEAIQLFERMLELGIKPDH-ITYVGVLTACTHGGLVEQGQR 535
W +++ A + LG++A ++ ++P++ + YV + G + G R
Sbjct: 512 WRTVLGACCRANGRKAELGKKAAEML-----FQLEPENAVNYVLL------GNMYAAGGR 560
Query: 536 YYNMMKNVHKIK 547
+ +++K K+K
Sbjct: 561 WEDLVKARKKMK 572
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/594 (37%), Positives = 356/594 (59%), Gaps = 39/594 (6%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
LD A + F ++ +N++I G ++N ++ F ML+ S++PD+ TL L
Sbjct: 88 LDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLR-LSIRPDRLTLPFVLK 146
Query: 287 ACANLEKLKLGKQIHAYIIRT--EFDA------------TGPVG---------------- 316
+ A L + LG+ +H +++ EFD+ G +G
Sbjct: 147 SVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAE 206
Query: 317 -----NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
N LI+ KVG + A + E + N ++ +L++G+++ GD+ AR +F
Sbjct: 207 SILLWNVLINGCCKVGDLSKAASLFE--AMPERNAGSWNSLINGFVRNGDLDRARELFVQ 264
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ +++VV+WT M+ G+ QNG ++ A+ +F M+ EG +PN+ T+ + L + + +L G
Sbjct: 265 MPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVG 324
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
++IH +G + + AL+ MY+K GNI +A RVF + + ++W+ MI A
Sbjct: 325 ERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGK-DLLTWSVMIWGWAI 383
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
HG ++A+Q F +M GI PD + ++ +LTAC+H G V+QG ++ M+ + I+PT
Sbjct: 384 HGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMK 443
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+ +VDLLGRAG L EA +FI++MP+ PD V WG+L ACR HKN+++ ++ AEKLL +
Sbjct: 444 HYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQL 503
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL 671
EP + G+Y L N+Y++ G+WED +R MK GV+K G+S+++++ +VH F D
Sbjct: 504 EPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHA 563
Query: 672 HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTP 731
H + + I K+ +I K+ G++P+TA VLH++EE+ KE L HSEKLA+AFGLIST
Sbjct: 564 HVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTA 623
Query: 732 ENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T+RI+KNLRVC DCHS +K+ KL REI++RD RFHHFK G CSC DYW
Sbjct: 624 PGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 217/495 (43%), Gaps = 73/495 (14%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S+ LD A +F + + + +I E RF+ ++ FV M++ + P
Sbjct: 78 LISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPD 137
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY-------------- 190
+ T+ VL S AL D+ G+ +H V+K GL V SL++MY
Sbjct: 138 RLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFD 197
Query: 191 ---------------------AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
KVGD A ++F+ M +N SWN +++ + +G LD
Sbjct: 198 ESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDR 257
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR F QM E++VV+W +MI G+SQNG +AL MF ML++ ++P+ T+ S L AC
Sbjct: 258 ARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEE-GVRPNDLTVVSALLACT 316
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ L++G++IH Y+ F +G AL+ YAK
Sbjct: 317 KIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKC----------------------- 353
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
G+I A R+F + +D++ W+ M+ G+ +G A++ F M G
Sbjct: 354 ----------GNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGIN 403
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASA-LRSGEASSLSVSNALITMYSKAGNINAARR 468
P+ A+L+ S ++D G S L ++ ++ + +AG ++ A
Sbjct: 404 PDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALS 463
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI-TYVGVLTACTHG 527
+ + V W ++ A H E A E++L+L +P H +YV +
Sbjct: 464 FIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQL--EPKHPGSYVFLSNVYAAV 521
Query: 528 GLVEQGQRYYNMMKN 542
G E +R +MKN
Sbjct: 522 GRWEDVERVRTLMKN 536
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 128/234 (54%), Gaps = 4/234 (1%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
S+ L N L+N K +S A +F+ MP + SWN++++ + + G LD A E+F MP
Sbjct: 207 SILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMP 266
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
++ VSWTT+I +++ G + A+ MF M+++ V P TV S L +CT +G L G++
Sbjct: 267 EKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGER 326
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+H+++ G + +L++MYAK G+ A VF + K++ +W+V++ G
Sbjct: 327 IHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGC 386
Query: 227 LDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
D A F +M I D V + +++ S +G + L F +M D S++P
Sbjct: 387 FDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEP 440
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ +H + G L+ + +L++ YAK +I A +VF E K L +W+ ++ +A
Sbjct: 323 VGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWA 382
Query: 91 KQGRLDLACEVFNLMP----NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPT 144
G D A + F M N D V + I+ + G + F M D + PT
Sbjct: 383 IHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPT 441
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/600 (38%), Positives = 357/600 (59%), Gaps = 36/600 (6%)
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MY+K+GD A A+++ MR KN S N++++ ++ +G L AR FD+M +R + TWN
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MIAG Q Y+ E L +F M PD++TL S S A L + +G+QIH Y I+
Sbjct: 61 AMIAGLIQFEYNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIK 119
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
G+E L+++ ++L Y++ G +
Sbjct: 120 Y--------------------GLE-------------LDLVVNSSLAHMYMRNGKLQDGE 146
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+ S+ R++VAW +++G QNG + + L++ M G +PN T +LS S LA
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
G+QIHA A++ G +S ++V ++LI+MYSK G + A + F+ ++ V W+SMI
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMI 265
Query: 487 VALAQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
A HG G+EAI+LF M E ++ + + ++ +L AC+H GL ++G ++MM +
Sbjct: 266 SAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
KP H+ +VDLLGRAG L +A I++MP++PD V W +LLSAC +HKN ++ +
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVF 385
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
+++L I+P++S Y L N+++S +W D + +RKSM+ VKK G SW + + +VH F
Sbjct: 386 KEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQF 445
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
+ D + IY+ + ++ E+K G+ PDTASVLHD++E+ KE L HSEKLA+AF
Sbjct: 446 KMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAF 505
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+ PE +RI+KNLRVC+DCH A K+I +++REI +RD +RFHHF G CSC DYW
Sbjct: 506 ALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 201/467 (43%), Gaps = 70/467 (14%)
Query: 55 MNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
M+ Y+K + A +++ M K S N +++ Y + G L A +VF+ MP+R +W
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWN 60
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I + + + +F EM P ++T+ SV + L +S G+++H + +K
Sbjct: 61 AMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKY 120
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
GL + V +SL +MY + G + V M ++N
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN------------------------ 156
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
+V WN++I G +QNG L ++ M+K S +P+K T + LS+C++L
Sbjct: 157 -------LVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
G+QIHA I+ + V ++LIS Y+K G
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC-------------------------- 242
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNY 413
+G A + F D D V W++M+ Y +G +A++LF SM + + N
Sbjct: 243 -------LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEV 295
Query: 414 TLSAMLSVSSSLASLDHGKQIHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
+L S D G ++ + + G L ++ + +AG ++ A +
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKS 355
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP-DHITYV 518
+ + + V W +++ A H E A ++F+ +LE I P D YV
Sbjct: 356 MPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE--IDPNDSACYV 400
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 62/264 (23%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ +G+ +H IK GL L + + +SL + Y + + + V MPV+ L +WNT++
Sbjct: 105 RSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
A+ G + ++ +M +S P +
Sbjct: 165 MGNAQNGCPETVLYLYKMM----KISGCR---------------------------PNKI 193
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +VL+SC+ L G+++H+ +K G S V V +SL++MY+K
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC------------- 240
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
G L A F + + D V W+SMI+ Y +G EA+ +F
Sbjct: 241 ------------------GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFN 282
Query: 267 NMLKDSSLKPDKFTLASTLSACAN 290
+M + + ++ ++ + L AC++
Sbjct: 283 SMAEQTEMEVNEVAFLNLLYACSH 306
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/575 (37%), Positives = 347/575 (60%), Gaps = 4/575 (0%)
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S+ ++VS + S L AR FD RD+ +++++A S + L + ML D
Sbjct: 37 SAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAAVSHSSDPELVLPLLRRMLSD 96
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+L+PD F LAS SA L L+LG+Q+HA+ + + A V ++LI Y K G +
Sbjct: 97 DALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQD 156
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+K+ + G+ N + +T L+ GY G G A +F S+ + WTA++ G+ + G
Sbjct: 157 ARKVFDSIGVK--NSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAG 214
Query: 392 LNKDAVELFRSMVREGPKPNN-YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
A+ LF M R+ + ++ + L+ ++ ++ LA+L G+Q+H +R G SS+ V
Sbjct: 215 NYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVG 274
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+ MYSK +I++AR VF I R + +SWT+++V AQHG EE L+ RML G+
Sbjct: 275 NALVDMYSKCSDIHSAREVFEGITVR-DVISWTTILVGEAQHGRAEEVFALYNRMLLAGM 333
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T+VG++ AC+H GLV++G++ ++ MK + +KP H+ +DLL R+G L EA
Sbjct: 334 KPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAE 393
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
I MP EPD WG+LLSAC+ H + + A+ LL + P + Y L N+Y+
Sbjct: 394 KLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNC 453
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
KW+ A +RK M + ++K G+SWV+ + +F + + I + ++ E++
Sbjct: 454 KWDSVAKVRKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGEEITCFLEELVSEMR 513
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
+ G+VPDT+SV+HD+EE KEQ L HSE+LA+AFG++ +P + +R++KNLRVC DCH+
Sbjct: 514 KRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHT 573
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KFI + R+I+VRDA+RFHHF+ G CSC ++W
Sbjct: 574 VMKFISAIAQRKIIVRDASRFHHFEDGNCSCSEFW 608
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 220/491 (44%), Gaps = 65/491 (13%)
Query: 29 PFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
P + VHAR++K GL L++ YA++ + A++ FD+ P + L ++ +L+A
Sbjct: 17 PRAVRRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAPRRDLHLYSALLAA 76
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
+ +L + M + D + P F +
Sbjct: 77 VSHSSDPELVLPLLRRM------------------------------LSDDALRPDHFVL 106
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
S+ ++ L L G+++H+ + S V +SL++MY K G A+ VFD + +
Sbjct: 107 ASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGV 166
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
KN W ++S + +G A F M + TW ++I+G+ + G A+G+F M
Sbjct: 167 KNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEM 226
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+D D F LA+ + A+L L LG+Q+H +++R F ++ VGNAL+ Y+K
Sbjct: 227 RRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSD 286
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+ A+++ E GI+ +VI +WT +LVG
Sbjct: 287 IHSAREVFE--GITVRDVI-------------------------------SWTTILVGEA 313
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSL 447
Q+G ++ L+ M+ G KPN T ++ S + G+Q+ S R G +
Sbjct: 314 QHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGV 373
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ + S++G ++ A ++ + + + +W +++ A +H + +++ + +LE
Sbjct: 374 QHYTCYLDLLSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLE 433
Query: 508 LGIKPDHITYV 518
L K D TY+
Sbjct: 434 LRPK-DPSTYI 443
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 135/265 (50%), Gaps = 5/265 (1%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A L + + R+ +G+ +HA +K+SL++ Y K A+KVFD + V
Sbjct: 107 ASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGV 166
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
K W ++S YA G A ++F MP +WT +I + + G + A+ +FVEM
Sbjct: 167 KNSVVWTALISGYASNGCTGEALDLFQSMPAHGLFTWTALISGFVKAGNYTGAMGLFVEM 226
Query: 137 VQDQV-LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+D + + F + +V+ L L G+++H FV++ G + V N+L++MY+K D
Sbjct: 227 RRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMRLGFLSSMIVGNALVDMYSKCSD 286
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAG 251
A+ VF+G+ +++V SW ++ GR + A +++M+ + + VT+ +I
Sbjct: 287 IHSAREVFEGITVRDVISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFVGLIYA 346
Query: 252 YSQNGYDFEALGMFANMLKDSSLKP 276
S G + +F +M ++ +KP
Sbjct: 347 CSHAGLVQKGRQLFDSMKREYGMKP 371
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 28/173 (16%)
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+++HA L+ G A S L++ Y+++ + ARR F+ R++ +++++ A++
Sbjct: 21 RRVHARLLKEGLADLPSAPALLVSAYARSCLLPDARRAFDDAP-RRDLHLYSALLAAVSH 79
Query: 492 HGLGEEAIQLFERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
E + L RML + ++PDH + +A G L R + + +H
Sbjct: 80 SSDPELVLPLLRRMLSDDALRPDHFVLASLASAA--GRL-----RSLRLGRQLH------ 126
Query: 551 SHFA------------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+HFA S++D+ + G+ Q+A +++ ++ VV W +L+S
Sbjct: 127 AHFAASPYSADNVVKSSLIDMYCKCGVPQDARKVFDSIGVKNSVV-WTALISG 178
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 340/571 (59%), Gaps = 36/571 (6%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N V+ +H+ G + AR FD+M ER++V+WN++I+G G EA +F NM ++ S
Sbjct: 14 NRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFS- 72
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
FT A + A A LE + +G+Q+HA ++ G + +SC
Sbjct: 73 DAGSFTFAVMIRASAGLELISIGRQLHACTLKM-----GIGDDIFVSC------------ 115
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
L+D Y K G I AR +F+ + ++ V W ++ GY +G ++
Sbjct: 116 ----------------ALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSE 159
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A++++ M G K +++T S ++ + + LAS++H KQ HA+ +R G S + + AL+
Sbjct: 160 EALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALV 219
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
YSK G I AR VF+ + + +SW ++I HG G EA++LFE+M++ + P+H
Sbjct: 220 DFYSKWGRIEDARHVFDKMA-SKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNH 278
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
IT++ VL+AC+H GL E+G + M ++IKP H+A M++L+GR GLL EA I
Sbjct: 279 ITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIR 338
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
P +P W +LL+ACRV++N +LGK AAEKL +EPD Y L N+Y+S G ++
Sbjct: 339 GAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKE 398
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
AA++ ++K G++ SW++++ + HVF D HPQR IY K+ K+ EI + G+
Sbjct: 399 AADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGY 458
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VP+ ++L DV+E +E++ +HSEKLAIAFGLISTP L+I++ R+C DCH AIK
Sbjct: 459 VPNQKTLLPDVDEQ-EERVRLYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKL 517
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I ++ REIV+RDA RFHHFK G CSC DYW
Sbjct: 518 IARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 211/472 (44%), Gaps = 70/472 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +L + K G + A +F+ MP R+ VSW TII ++G F A R+F+ M ++
Sbjct: 14 NRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSD 73
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
FT ++ + L +S G+++H+ +K G+ + V+ +L++MY+K G A+ V
Sbjct: 74 AGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFV 133
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M K V WN++IAGY+ +GY EAL
Sbjct: 134 FEEMPEKT-------------------------------TVGWNTIIAGYALHGYSEEAL 162
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
M+ M +DS +K D FT + + CA L ++ KQ HA +IR F + AL+
Sbjct: 163 DMYYEM-RDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDF 221
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+K G +E A+ + ++ ++ NVI++ L+
Sbjct: 222 YSKWGRIEDARHVFDK--MASKNVISWNALIG---------------------------- 251
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
GY +G +AVELF M++E PN+ T A+LS S + G +I S R
Sbjct: 252 ---GYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDN 308
Query: 443 EASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
++ A +I + + G ++ A + ++ W +++ A + E
Sbjct: 309 RIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKFA 368
Query: 502 FERMLELGIKPDHI-TYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKPTPS 551
E++ G++PD + Y+ +L + G L E + + + +++P S
Sbjct: 369 AEKL--YGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCS 418
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 158/360 (43%), Gaps = 44/360 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +K G+ +F+ +L++ Y+K SI A+ VF+E
Sbjct: 94 IGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEE----------------- 136
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
MP + +V W TII Y G + A+ M+ EM V FT +
Sbjct: 137 --------------MPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSM 182
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ C L + K+ H+ +++ G + +L++ Y+K G A+ VFD M KN
Sbjct: 183 IVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKN 242
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFA 266
V SWN ++ + + GR A F+QMI+ + +T+ ++++ S +G +F
Sbjct: 243 VISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQ 302
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+M +D+ +KP A + + + L + A I F T + AL++
Sbjct: 303 SMGRDNRIKPRAMHYACMIEL---MGREGLLDEALALIRGAPFKPTANMWAALLTACRVN 359
Query: 327 GGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS-----LRDRDVVAW 380
E+ + E+ G+ + + LL+ Y G++ A + + LR R V +W
Sbjct: 360 ENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSW 419
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/713 (34%), Positives = 395/713 (55%), Gaps = 79/713 (11%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S YA+ G + A VF++ RD VSW +++ Y +G + +R+F M + +
Sbjct: 153 NSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMG 212
Query: 143 PTQFTVTSVLASCTALGDLSA---GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
F + SV+ C+ GD S + VH VVK GL + + +++++MYAK
Sbjct: 213 LNSFALGSVIKCCSG-GDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAK------- 264
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
G L A A F +++ +VV +N+MIAG ++
Sbjct: 265 ------------------------RGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAV 300
Query: 260 ------EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
EAL +++ L+ ++P +FT +S + AC ++ GKQIH +++ F
Sbjct: 301 HKEVVREALSLYSE-LQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDD 359
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+G+ALI Y +E DG+ R F S+
Sbjct: 360 FIGSALIDLYFNSACME-----------------------DGF----------RCFRSVP 386
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+DVV WTAM+ G QN L + A+ LF ++ G KP+ +T+S++++ +SLA + G+Q
Sbjct: 387 KQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQ 446
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+ A +SG ++ N+ I MY+++GN+ AA + F + + VSW+++I + AQHG
Sbjct: 447 MQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEME-SHDVVSWSAIISSHAQHG 505
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
+A+Q F M+ + P+ IT++GVLTAC+HGGLV++G RYY +MK + + PT H
Sbjct: 506 CARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHC 565
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP 613
+VDLLGRAG L +A FI + + V W SLL +CR+H++++ G++ A++++ ++P
Sbjct: 566 TCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQP 625
Query: 614 DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP 673
+SG Y L N+Y G+ + IR MK GVKK G SW+++++ +H F D HP
Sbjct: 626 ASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHP 685
Query: 674 QRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ-MLRHHSEKLAIAFGLISTPE 732
+ +AIY K+A++ +I ++ DT S + VE +EQ + HSEKLA+A G+I P+
Sbjct: 686 ECNAIYTKLAEMLSKIDKLT-TTDT-SCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQ 743
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +R+MKNLRVC DCHS +K I K REI++RD RFHHF+ G CSC DYW
Sbjct: 744 SAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/513 (41%), Positives = 317/513 (61%), Gaps = 39/513 (7%)
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+KP+ FT ++ L+A + ++ HA I+ + + VG
Sbjct: 6 IKPNDFTYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVG----------------- 44
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
T LLD Y+K G++ A ++F + ++D+VAW+AM+ GY Q G
Sbjct: 45 ----------------TALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDT 88
Query: 394 KDAVELFRSMVREGPKPNNYTLSAML-SVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+ AV +F M +E KPN YT S ++ + ++ A ++ GKQ+HA +++S ++L VS+A
Sbjct: 89 EGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSA 148
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+TMYSK G+I +A VF R + VSW S+I AQHG G +A+++FE M ++
Sbjct: 149 LLTMYSKRGDIESAFEVFKRQRER-DLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEM 207
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
D +T++GV++ACTH GL +GQRY+++M H I+P H++ MVDL GRAG+L +A
Sbjct: 208 DGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEI 267
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I MP W +LL+A +H+NL++GK+AA+KL+ ++P N +Y L N+Y+S G W
Sbjct: 268 INEMPFPASANVWRTLLAASCIHRNLEVGKLAADKLISLQPQNPASYVLLTNMYASVGNW 327
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
++ A +RK M+ VKK G+SW++++NK + F D HP + IY K+ ++ ++K
Sbjct: 328 KERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFLAGDVSHPLSNQIYAKLEELSCQLKGA 387
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+ PDT+ V DV+E+ KE +L HSE+LAIAFGLI TP T L+I+KNLRVC DCHS I
Sbjct: 388 GYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVI 447
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I L R+IVVRD+ RFHHFK GLCSC DYW
Sbjct: 448 KLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
VK+ +L AY K+G +D A +VF + +D V+W+ +I Y +IG + A+R+FV+
Sbjct: 38 VKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQ 97
Query: 136 MVQDQVLPTQFTVTSVLASCTA-LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M ++++ P ++T + ++ +C A + GK++H++ +K+ + + V+++LL MY+K G
Sbjct: 98 MAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRG 157
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIA 250
D A VF R +++ SWN ++S + G A F++M +E D VT+ +I+
Sbjct: 158 DIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVIS 217
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKP 276
+ G E F M+KD ++P
Sbjct: 218 ACTHTGLANEGQRYFDIMVKDHHIEP 243
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 144/299 (48%), Gaps = 37/299 (12%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
EM A+A+ +K+ S ++ ++ G +D A F ++ E+D+V W++MI GY+Q
Sbjct: 27 EMHAQAIKRNY-VKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQI 85
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN-LEKLKLGKQIHAYIIRTEFDATGP 314
G A+ +F M K+ +KP+++T + ++ACA ++ GKQ+HA+ I++ F+
Sbjct: 86 GDTEGAVRIFVQMAKEK-IKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALC 144
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V +AL++ Y+K G DI A +F R+
Sbjct: 145 VSSALLTMYSKRG---------------------------------DIESAFEVFKRQRE 171
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD+V+W +++ GY Q+G + A+E+F M R+ + + T ++S + + G++
Sbjct: 172 RDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRY 231
Query: 435 HASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++ + + ++ +Y +AG + A + N + + W +++ A H
Sbjct: 232 FDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIH 290
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 26/203 (12%)
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGN 462
M REG KPN++T S +L+ ++ + +HA A++ S SV AL+ Y K GN
Sbjct: 1 MSREGIKPNDFTYSTILTAQPGVSPFE----MHAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
++ A +VF I ++ V+W++MI AQ G E A+++F +M + IKP+ T+ G++
Sbjct: 57 VDEASKVFQRIE-EKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIIN 115
Query: 523 AC---THGGLVEQGQRYYNMMKNVHKIKPTPSHF-------ASMVDLLGRAGLLQEAYNF 572
AC T G VEQG++ + IK S F ++++ + + G ++ A+
Sbjct: 116 ACAAPTAG--VEQGKQLH-----AWSIK---SRFNNALCVSSALLTMYSKRGDIESAFEV 165
Query: 573 IENMPLEPDVVAWGSLLSACRVH 595
+ E D+V+W S++S H
Sbjct: 166 FKRQ-RERDLVSWNSIISGYAQH 187
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA IK + ++ + ++L+ Y+K I A +VF + L SWN+I+S YA+
Sbjct: 127 GKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQ 186
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
G A EVF M + D V++ +I G R F MV+D
Sbjct: 187 HGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDH 239
>gi|356532255|ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Glycine max]
Length = 948
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/721 (33%), Positives = 394/721 (54%), Gaps = 79/721 (10%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA +IK L ++NSL++ Y K +I+ A+ VF + +L WN+++ Y++
Sbjct: 164 LHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYG 223
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
A VF MP D VSW T+I +++ G + +VEM P T SVL++
Sbjct: 224 PYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLSTYVEMCNLGFKPNFMTYGSVLSA 283
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C ++ DL G +H+ +++ S + + L++MYAK G
Sbjct: 284 CASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCG-------------------- 323
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
L LAR F+ + E++ V+W +I+G +Q G +AL +F N ++ +S+
Sbjct: 324 -----------CLALARRVFNSLGEQNQVSWTCLISGVAQFGLGDDALALF-NQMRQASV 371
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
D+FTL + L C+ G+ +H Y I+ D++ PVGNA+I+ YA+ G E A
Sbjct: 372 VLDEFTLVTILGVCSGQNYAATGELLHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASL 431
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + I++T ++ + + GDI AR+ FD +R+V+ W +ML Y Q+G ++
Sbjct: 432 AFRSMPLR--DTISWTAMITAFSQNGDIDRARQCFDMTPERNVITWNSMLSTYIQHGFSE 489
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+ ++L+ M + KP+ T + + + LA++ G Q+ + + G +S +SV+N+++
Sbjct: 490 EGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIV 549
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
TMYS+ G I AR+VF+ IH + +SW +M+ A AQ+GLG +AI+ +E ML KPDH
Sbjct: 550 TMYSRCGQIKEARKVFDSIHVKN-LISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDH 608
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
I+YV VL+ DLLGRAGLL +A N I+
Sbjct: 609 ISYVAVLS-----------------------------------DLLGRAGLLDQAKNLID 633
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
MP +P+ WG+LL ACR+H + L K AA+KL+ + ++SG Y L N+Y+ G+ E+
Sbjct: 634 GMPFKPNATVWGALLGACRIHHDSILAKTAAKKLMELNVEDSGGYVLLANIYTESGELEN 693
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
A++RK MK G++K+ G SW+++ N++HVF V++ HPQ + +Y K+ ++ +I++ G
Sbjct: 694 VADMRKLMKVKGIRKSPGCSWIEVDNRLHVFTVDETSHPQINEVYVKLEEMMKKIEDTGR 753
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
S H + ++HSEKLA AFGL+S P +++ KNLRVCNDCH +K+
Sbjct: 754 YVSIVSCAHRSQ--------KYHSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCH-LVKY 804
Query: 755 I 755
I
Sbjct: 805 I 805
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 180/656 (27%), Positives = 313/656 (47%), Gaps = 76/656 (11%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P + + +HA++I GL S+FL N+L++ Y+ + A VF E + +WNT+L
Sbjct: 19 SPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLH 78
Query: 88 AYAKQGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
A+ GR+ A +F+ MP+ RDSVSWTT+I Y + G ++I+ F+ M++D Q
Sbjct: 79 AFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQ 138
Query: 146 ----FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
F+ T + +C L ++H+ V+K L + NSL++MY K G +A+
Sbjct: 139 NCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAET 198
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VF + ++ WN ++ + A F +M + D V+WN++I+ +SQ G+
Sbjct: 199 VFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRC 258
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L + M + KP+ T S LSACA++ LK G +HA I+R E +G+ LI
Sbjct: 259 LSTYVEMC-NLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLID 317
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G + +A+ R+F+SL +++ V+WT
Sbjct: 318 MYAKCGCLALAR---------------------------------RVFNSLGEQNQVSWT 344
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ G Q GL DA+ LF M + + +TL +L V S G+ +H A+++
Sbjct: 345 CLISGVAQFGLGDDALALFNQMRQASVVLDEFTLVTILGVCSGQNYAATGELLHGYAIKN 404
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA----------- 490
G SS+ V NA+ITMY++ G+ A F + R +T+SWT+MI A +
Sbjct: 405 GMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLR-DTISWTAMITAFSQNGDIDRARQC 463
Query: 491 --------------------QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLV 530
QHG EE ++L+ M +KPD +T+ + AC +
Sbjct: 464 FDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATI 523
Query: 531 EQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+ G + + + + S S+V + R G ++EA +++ ++ ++++W ++++
Sbjct: 524 KLGTQVVSHVTKF-GLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK-NLISWNAMMA 581
Query: 591 ACRVHKNLDLGKIAAEKLLLIE--PDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
A + + E +L E PD+ + L +L G + A N+ M +
Sbjct: 582 AFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDLLGRAGLLDQAKNLIDGMPF 637
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 248/512 (48%), Gaps = 23/512 (4%)
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
G +K+H+ ++ +GL + + N+LL+MY+ G A VF N+ +WN ++
Sbjct: 18 GSPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTML 77
Query: 219 SLHIHSGRLDLARAQFDQM--IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS--- 273
SGR+ A FD+M I RD V+W +MI+GY QNG ++ F +ML+DS+
Sbjct: 78 HAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDI 137
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
D F+ T+ AC L + Q+HA++I+ A + N+L+ Y K G + +A+
Sbjct: 138 QNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAE 197
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
+ I ++ + +++ GY ++ A +F + D V+W ++ + Q G
Sbjct: 198 TVFLN--IESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHG 255
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+ + M G KPN T ++LS +S++ L G +HA LR + + + L
Sbjct: 256 IRCLSTYVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGL 315
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
I MY+K G + ARRVFN + Q VSWT +I +AQ GLG++A+ LF +M + + D
Sbjct: 316 IDMYAKCGCLALARRVFNSLG-EQNQVSWTCLISGVAQFGLGDDALALFNQMRQASVVLD 374
Query: 514 HITYVGVLTACTHGGLVEQGQ--RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
T V +L C+ G+ Y + + P + +++ + R G ++A
Sbjct: 375 EFTLVTILGVCSGQNYAATGELLHGYAIKNGMDSSVPVGN---AIITMYARCGDTEKASL 431
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCG 630
+MPL D ++W ++++A + ++D A + + P+ N ++++ + Y G
Sbjct: 432 AFRSMPLR-DTISWTAMITAFSQNGDID----RARQCFDMTPERNVITWNSMLSTYIQHG 486
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
E+ + M+ VK WV +
Sbjct: 487 FSEEGMKLYVLMRSKAVKP----DWVTFATSI 514
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 42/318 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+L+H IK G+ SV + N+++ YA+ A F MP++ SW +++A++
Sbjct: 393 TGELLHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFS 452
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G +D A + F++ P R+ ++W +++ TY + G + ++++V M V P T +
Sbjct: 453 QNGDIDRARQCFDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFAT 512
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+ +C L + G +V S V K GLS V+V NS++ MY++ G A+ VFD + +KN
Sbjct: 513 SIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKN 572
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ SW N+M+A ++QNG +A+ + +ML+
Sbjct: 573 LISW-------------------------------NAMMAAFAQNGLGNKAIETYEDMLR 601
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI--------SC 322
+ KPD + + LS L + L Q I F V AL+ S
Sbjct: 602 -TECKPDHISYVAVLSDL--LGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSI 658
Query: 323 YAKVGGVEIAQKIVEQSG 340
AK ++ + VE SG
Sbjct: 659 LAKTAAKKLMELNVEDSG 676
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/592 (39%), Positives = 344/592 (58%), Gaps = 44/592 (7%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD++ ER+V+ N MI Y NG+ E + +F M +KPD +T L AC+
Sbjct: 94 ARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCS-CHVKPDHYTFPCVLKACS 152
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ +GK+IH + +T VGN L+S Y K G + A+ ++++ +S +V+++
Sbjct: 153 CSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE--MSRRDVVSW 210
Query: 350 TTLLDGY------------------IKIG-DIG------PA------------RRIFDSL 372
+L+ GY +KI D G PA + +F +
Sbjct: 211 NSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 270
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+ +V+W M+ Y +N + +AVEL+ M +G +P+ +++++L ++L GK
Sbjct: 271 GKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGK 330
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH R +L + NALI MY+K G ++ AR VF + R + VSWT+MI A
Sbjct: 331 KIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSR-DVVSWTAMISAYGFS 389
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G G +A+ LF +M + G+ PD I +V L AC+H GL+E+G+ + +M + +KI P H
Sbjct: 390 GRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 449
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
A MVDLLGRAG ++EAY FI+ MP+EP+ WG+LL ACRVH N D+G +AA+KL +
Sbjct: 450 LACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLA 509
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P+ SG Y L N+Y+ G+WE+ NIR MK G+KK G S V++ +H F V D H
Sbjct: 510 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 569
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQ IY ++ + ++KE+G+VPD+ S LHDVEE+ KE L HSEKLAI F L++T E
Sbjct: 570 PQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEE 629
Query: 733 ---NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
N +RI KNLR+C DCH A K I ++ REI++RD RFH F+ G+CSC
Sbjct: 630 EDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 225/549 (40%), Gaps = 106/549 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+ VH+RII L + L LM YA + ++ A+KVFDE+
Sbjct: 60 RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEI------------------ 101
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
P R+ + +I +Y G ++ I++F M V P +T VL
Sbjct: 102 -------------PERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVL 148
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C+ G++ GKK+H K GLS + V N L++MY K G A+ V D M ++V
Sbjct: 149 KACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 208
Query: 213 SWNVVVSLHIHSGRLDLA-------------------------------------RAQFD 235
SWN +V+ + + R D A + F
Sbjct: 209 SWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 268
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+M ++ +V+WN MI Y +N EA+ +++ M D +PD ++ S L AC + L
Sbjct: 269 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEAD-GFEPDAVSITSVLPACGDTSALS 327
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
LGK+IH YI R + + NALI YAK G ++
Sbjct: 328 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLD------------------------- 362
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
AR +F++++ RDVV+WTAM+ Y +G DAV LF M G P++
Sbjct: 363 --------RARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAF 414
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIH 474
L+ S L+ G+ + + L ++ + +AG + A + +
Sbjct: 415 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMP 474
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQG 533
W +++ A H + + +++ +L P+ Y +L+ G E+
Sbjct: 475 MEPNERVWGALLGACRVHSNTDIGLLAADKLFQLA--PEQSGYYVLLSNIYAKAGRWEEV 532
Query: 534 QRYYNMMKN 542
N+MK+
Sbjct: 533 TNIRNIMKS 541
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 69/310 (22%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
S N +GK +H K GL ++F+ N L++ Y K +S A+ V DEM + + SWN++
Sbjct: 154 SGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 213
Query: 86 LSAYAKQGRLDLACEV-------------------------------------FNLMPNR 108
++ YA+ R D A EV F M +
Sbjct: 214 VAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 273
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
VSW +I Y + A+ ++ M D P ++TSVL +C LS GKK+H
Sbjct: 274 SLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 333
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
++ + L + + N+L++MYAK G A+ VF+ M+ ++V SW ++S +
Sbjct: 334 GYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAY------- 386
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
G+S G D A+ +F+ M +DS L PD +TL+AC
Sbjct: 387 ----------------------GFSGRGCD--AVALFSKM-QDSGLVPDSIAFVTTLAAC 421
Query: 289 ANLEKLKLGK 298
++ L+ G+
Sbjct: 422 SHAGLLEEGR 431
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+ PK + L +L L +L + +H+ + + S+ L+ Y+ ++
Sbjct: 36 KNSPKETAFMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVA 92
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AR+VF+ I R + MI + +G E IQ+F M +KPDH T+ VL AC
Sbjct: 93 TARKVFDEIPERN-VIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKAC 151
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+ G + G++ + + K+ + + F +V + G+ G L EA ++ M DV
Sbjct: 152 SCSGNIVIGKKIHG---SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR-DV 207
Query: 583 VAWGSLLSACRVHKNLD 599
V+W SL++ ++ D
Sbjct: 208 VSWNSLVAGYAQNQRFD 224
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H I + L ++ L+N+L++ YAK + A+ VF+ M + + SW ++SAY
Sbjct: 328 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYG 387
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
GR A +F+ M + DS+++ T + + G + F +++ +
Sbjct: 388 FSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF------KLMTDHY 441
Query: 147 TVTSVLASCTALGDL--SAGK 165
+T L + DL AGK
Sbjct: 442 KITPRLEHLACMVDLLGRAGK 462
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/570 (38%), Positives = 350/570 (61%), Gaps = 4/570 (0%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+VS + S L A FD+ RD+ ++S++ S + AL + ML +L P
Sbjct: 44 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 103
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D F ++S S A L +LG+Q+HA+ + + ++ V ++L+ Y K G + +K+
Sbjct: 104 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 163
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+ +S N + +T L+ GY G A ++F S+ R++ AWTA++ G G + A
Sbjct: 164 DS--MSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGA 221
Query: 397 VELFRSMVREGPKPNN-YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
VELF M R+G + ++ + LS ++ S+ LA+ G+Q+H S +R G S++ V NALI
Sbjct: 222 VELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALID 281
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK +I +AR VF I +R + +SWT+M+V AQHG EEA+ L++RM+ G KP+ +
Sbjct: 282 MYSKCSDILSAREVFEGITFR-DVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEV 340
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T+VG++ AC+H GLV++G++ + MKN + I P H+ +DLL R+G L EA +
Sbjct: 341 TFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTT 400
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EPD WG+LLSAC +K+ ++ ++KLL + P +S Y L N+Y+ GKW+
Sbjct: 401 MPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSV 460
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
A +RK M + ++K G+SW++ + +F + R+ I + ++ E+++ G+V
Sbjct: 461 AKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYV 520
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
PDT+SV+HD+EE KE L HSE+LA+AFGLI +P + +R++KNLRVC DCH+ +K I
Sbjct: 521 PDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLI 580
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++ R+IVVRD++RFHHF+ G CSC ++W
Sbjct: 581 SEITHRKIVVRDSSRFHHFEGGKCSCSEFW 610
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 220/492 (44%), Gaps = 65/492 (13%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P + +HARI+K GL +L++ YAK+ + A +FDE P + + ++++L+
Sbjct: 18 SPAAVRGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLT 77
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
A + +LA + M + D + P F
Sbjct: 78 AVSHSASPELALPILRCM------------------------------LSADALHPDHFV 107
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
++SV + L G+++H+ V + +G V +SL++MY K G + VFD M
Sbjct: 108 ISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMS 167
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
KN W +VS + +GR + A F M R++ W ++I+G G A+ +F
Sbjct: 168 AKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVE 227
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D D F L+ + A+L LG+Q+H +R F + VGNALI Y+K
Sbjct: 228 MRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCS 287
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A+++ E GI++ +VI++TT M+VG
Sbjct: 288 DILSAREVFE--GITFRDVISWTT-------------------------------MVVGE 314
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
Q+G ++A+ L+ MV G KPN T ++ S + G+Q+ S G
Sbjct: 315 AQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPR 374
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L + + S++G++ A + + + + +W +++ A ++ E I++ +++L
Sbjct: 375 LQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL 434
Query: 507 ELGIKPDHITYV 518
EL K D TY+
Sbjct: 435 ELRPK-DSSTYI 445
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 7/260 (2%)
Query: 22 SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS 81
+ L+SR +G+ +HA + + +K+SL++ Y K S +KVFD M K
Sbjct: 116 ARLRSRR--LGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVV 173
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
W ++S YA GR + A ++F MP R+ +WT +I G A+ +FVEM +D V
Sbjct: 174 WTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGV 233
Query: 142 -LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+ F ++ V+ L G+++H ++ G + V N+L++MY+K D + A+
Sbjct: 234 RIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAR 293
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNG 256
VF+G+ ++V SW +V GR + A A +D+M+ + + VT+ +I S G
Sbjct: 294 EVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAG 353
Query: 257 YDFEALGMFANMLKDSSLKP 276
+ +F +M + + P
Sbjct: 354 LVQKGRQLFESMKNEYGITP 373
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/783 (31%), Positives = 421/783 (53%), Gaps = 73/783 (9%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I P E+ + +L + ++S +G VHA IK G VF+ N+L+ Y K
Sbjct: 199 IEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKC------- 251
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
G LD A +F+ MP RD SW T+I + + ++
Sbjct: 252 ------------------------GCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEK 287
Query: 129 AIRMFVEMVQDQVLPT-QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
A+ +F + Q++ QFT++++L +C G+++H++ ++ GL ++V+N+++
Sbjct: 288 ALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAII 347
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
Y + G A+F+ M ++++ +W +++ ++ G +DLA F++M E++ V++N+
Sbjct: 348 GFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNA 407
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
++ G+ +N +AL +F M+++ + D FTL ++AC L KL++ +QIH +II+
Sbjct: 408 LLTGFCKNNEGLKALNLFVRMVQEGAELTD-FTLTGVINACGLLLKLEISRQIHGFIIKF 466
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
F + + ALI D K G + A R
Sbjct: 467 GFRSNACIEAALI---------------------------------DMCSKCGRMDDADR 493
Query: 368 IFDSLRDR--DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP-NNYTLSAMLSVSSS 424
+F SL + + T+M+ GY +NGL ++A+ LF EG + +++L V +
Sbjct: 494 MFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGT 553
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L + GKQIH AL++G + L V N++I+MYSK NI+ A + FN + + VSW
Sbjct: 554 LGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPG-HDVVSWNG 612
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA--CTHGGLVEQGQRYYNMMKN 542
+I H G+EA+ ++ M + GIKPD IT+V +++A T L+++ + + MK
Sbjct: 613 LIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKM 672
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+H ++PT H+AS+V +LG GLL+EA I MP +P+V W +LL CR+H N +GK
Sbjct: 673 IHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGK 732
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
A+ ++ +EP + Y + NLY++ G+W + +R++M+ G++K SWV I+ ++
Sbjct: 733 RVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQL 792
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F D HPQ + IY+ + + + + G+ PD + VL +VEE K+ L +HS KLA
Sbjct: 793 HTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLA 852
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
+GL+ T +R++KN+ +C DCH+ +K+ + REI+ RDA+ FH F G CSC+
Sbjct: 853 ATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCK 912
Query: 783 DYW 785
YW
Sbjct: 913 GYW 915
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 252/657 (38%), Positives = 362/657 (55%), Gaps = 52/657 (7%)
Query: 137 VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
VQ V P F C ++ L ++ HS +++ GLS ++ L+N A+
Sbjct: 20 VQMHVEPFHFE------KCQSMSQL---RQYHSQIIRLGLSSHNHLIPPLINFCARAST- 69
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY--SQ 254
S L A FD + + D +N++I G+ SQ
Sbjct: 70 ---------------------------SDALTYALKLFDSIPQPDAFLYNTIIKGFLHSQ 102
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
L ++++ML++S L P+ FT S L AC K++ G QIHA++ + F A
Sbjct: 103 LLPTNSILLLYSHMLQNSVL-PNNFTFPSLLIAC---RKIQHGMQIHAHLFKFGFGAHSV 158
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
N+LI Y +E A+++ I + + +++T+L+ GY K G I A IF +
Sbjct: 159 CLNSLIHMYVTFQALEEARRVFHT--IPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQ 216
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP-NNYTLSAMLSVSSSLASLDHGKQ 433
++ +W AM+ Y Q +A LF M E + + + MLS + L +LD GK
Sbjct: 217 KNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKW 276
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQH 492
IH R+G ++ A++ MY K G + A +VF+ + +S W MI LA H
Sbjct: 277 IHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMH 336
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G GE AIQLF+ M + PD IT++ +LTAC H GLVE+G+ Y++ M V+ I+P H
Sbjct: 337 GNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEH 396
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
F MVDLLGRAG++ EA I+ MP+ PDV G+LL AC+ H+N++LG+ +++ +E
Sbjct: 397 FGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELE 456
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P+NSG Y L NLY++ GKWEDAA +RK M GVKK GFS +++Q VH F + H
Sbjct: 457 PNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNH 516
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLH----DVEEDVKEQMLRHHSEKLAIAFGLI 728
PQ ++ K+ ++ + +K +G+V DT VLH D EED E L +HSEKLAIAFGL
Sbjct: 517 PQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFDEEED-GENPLYYHSEKLAIAFGLS 575
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T TLRI+KNLR+C DCH A K I + DREI+VRD TRFH FK G CSC+DYW
Sbjct: 576 RTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQCSCQDYW 632
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 235/533 (44%), Gaps = 77/533 (14%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAK---TESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
H++II+ GL L L+NF A+ +++++YA K+FD +P +NTI+ +
Sbjct: 42 HSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKGFLHS 101
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
L+P +I++ Y+ M+Q+ VLP FT S+L
Sbjct: 102 ----------QLLPT------NSILLLYS-------------HMLQNSVLPNNFTFPSLL 132
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C + G ++H+ + K G NSL++MY A+ VF + +
Sbjct: 133 IACR---KIQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSV 189
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SW ++S + G +D A F M +++ +WN+M+A Y Q EA +F M ++
Sbjct: 190 SWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAEN 249
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+ DKF + LSAC L L GK IH YI R G+E+
Sbjct: 250 NNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRN--------------------GIELD 289
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS--LRDRDVVAWTAMLVGYEQN 390
K+ T ++D Y K G + A ++F S L R + +W M+ G +
Sbjct: 290 SKLT-------------TAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMH 336
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSV 449
G + A++LF+ M R+ P++ T +L+ + ++ G+ + +R G +
Sbjct: 337 GNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEH 396
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
++ + +AG + AR++ + + + +++ A +H E ++ R++EL
Sbjct: 397 FGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIEL- 455
Query: 510 IKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
+P++ YV + + G E + +M + +K P SM++L G
Sbjct: 456 -EPNNSGRYVLLANLYANAGKWEDAAKVRKLMDD-RGVKKAPGF--SMIELQG 504
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 193/419 (46%), Gaps = 54/419 (12%)
Query: 11 SPLEFYAHLLQSNLKSRN---PFV---------GKLVHARIIKCGLHLSVFLKNSLMNFY 58
S L Y+H+LQ+++ N P + G +HA + K G NSL++ Y
Sbjct: 108 SILLLYSHMLQNSVLPNNFTFPSLLIACRKIQHGMQIHAHLFKFGFGAHSVCLNSLIHMY 167
Query: 59 AKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIV 118
+++ A++VF +P SW +++S Y+K G +D A +F LMP ++S SW ++
Sbjct: 168 VTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMA 227
Query: 119 TYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
Y + RF A +F M ++ + +F T++L++CT LG L GK +H ++ + G+
Sbjct: 228 AYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIE 287
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+T ++++MY K G A VF + L W
Sbjct: 288 LDSKLTTAIVDMYCKCGCLEKALQVFHSLPLP--CRW----------------------- 322
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
+ +WN MI G + +G A+ +F M + + PD T + L+ACA+ ++ G
Sbjct: 323 ----ISSWNCMIGGLAMHGNGEAAIQLFKEM-ERQRVAPDDITFLNLLTACAHSGLVEEG 377
Query: 298 KQIHAYIIRTE-FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
+ +Y+IR + ++ + G V A+K++++ +S +V TLL
Sbjct: 378 RNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVS-PDVTVLGTLLGAC 436
Query: 357 -----IKIG-DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
I++G +IG RR+ + L + + + Y G +DA ++ + M G K
Sbjct: 437 KKHRNIELGEEIG--RRVIE-LEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVK 492
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 266/737 (36%), Positives = 396/737 (53%), Gaps = 80/737 (10%)
Query: 39 IIKCGLHLSVFLK-----NSLMNFYAKTESISYAKKVFDEMPVKTLCS----WNTILSAY 89
K H + FL NSL+N + + +A ++ ++ L S +N +L+ Y
Sbjct: 16 FFKSHYHQTPFLHPLTSLNSLLNC---SRTSKHATQIHSQLITTALLSLPFLFNNLLNLY 72
Query: 90 AKQGRLDLACEVFNLMPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AK G +D +F+ P+ ++ VSWT++I R A+ F M + V P +T
Sbjct: 73 AKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYT 132
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
++VL++CT G+++HS V K G V V ++L++MYAK D +MA+ VF+ M
Sbjct: 133 FSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMP 192
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++N+ V+WN+MI G+ QN +A+ F
Sbjct: 193 VRNL-------------------------------VSWNTMIVGFLQNKLYDQAIFFFKT 221
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+L ++ D+ + +S SACAN L+ GKQ+H G AL K+G
Sbjct: 222 LLLENLTALDEVSFSSVFSACANAGNLEFGKQVH--------------GVAL-----KLG 262
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ Y+N +L D Y K G ++F + RDVV W M++ Y
Sbjct: 263 VWNLV----------YIN----NSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAY 308
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
N +DA F M R+G P+ + S++L ++LA+L G IH +RSG +L
Sbjct: 309 VYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNL 368
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V+++LITMY+K G++ A ++F R V WT++I A QHG ++LFE+ML
Sbjct: 369 RVASSLITMYAKCGSLVDAFQIFEETEDRN-VVCWTAIIAACQQHGHANWVVELFEQMLR 427
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GIKPD+IT+V VL+AC+H G VE+G Y+N M VH I P H+A +VDLL RAG L
Sbjct: 428 EGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELD 487
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
A FIE MP++PD WG+LLSACR H NL +GK A KL +EPDN G Y LCN+ +
Sbjct: 488 RAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILT 547
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
G +A +R+ M+ +GV+K G SW+ I+N +VF V D H + IY + K+ +
Sbjct: 548 RNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKE 607
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+K+ G+V +T ++ EE KEQ L +HSEK+A+AFGL+S P +RI KNLR C D
Sbjct: 608 LVKKKGYVAETEFAINTAEE-YKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGD 666
Query: 748 CHSAIKFICKLVDREIV 764
CH+ +KF ++ REI+
Sbjct: 667 CHTVMKFASEIFAREII 683
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 231/518 (44%), Gaps = 107/518 (20%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+ + K G VF+ ++L++ YAK + A+KVF+EMPV+ L SWNT++ + +
Sbjct: 149 GEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQ 208
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
D A F + ++++ + + +SV
Sbjct: 209 NKLYDQAIFFFKTL------------------------------LLENLTALDEVSFSSV 238
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
++C G+L GK+VH +K G+ V + NSL +MY K G
Sbjct: 239 FSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCG----------------- 281
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+N V L ++G RDVVTWN MI Y N +A F M +
Sbjct: 282 -LFNDVAKLFSNTG-------------ARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRK 327
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S+ PD+ + +S L +CANL L G IH IIR+ F V ++LI+ YAK G
Sbjct: 328 GSI-PDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCG---- 382
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+L+D + +IF+ DR+VV WTA++ +Q+G
Sbjct: 383 -------------------SLVDAF----------QIFEETEDRNVVCWTAIIAACQQHG 413
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVS 450
VELF M+REG KP+ T ++LS S ++ G S ++ G
Sbjct: 414 HANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHY 473
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE-AIQLFERML 506
++ + S+AG ++ A+R L+ + + W +++ A H +G+E A++LF+
Sbjct: 474 ACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD--- 530
Query: 507 ELGIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKNV 543
++PD+ YV + T G++ + M+++
Sbjct: 531 ---LEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESI 565
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 13/185 (7%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ +L S + G L+H +II+ G ++ + +SL+ YAK S+ A ++F+E
Sbjct: 336 YSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE 395
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIR 131
+ + W I++A + G + E+F M D +++ +++ + GR +
Sbjct: 396 DRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFF 455
Query: 132 MFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGK--------KVHSFVVKTGLSGCVNV 182
F M++ + P ++ + G+L K K + V LS C N
Sbjct: 456 YFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNH 515
Query: 183 TNSLL 187
+N ++
Sbjct: 516 SNLIM 520
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/436 (45%), Positives = 292/436 (66%), Gaps = 1/436 (0%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
L+D Y K G A +F+ + D+DV++WT+++ G NG ++A+ LF M G
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P+ ++A+LS + L L+ GKQ+HA+ L+SG SSLSV N+L++MY+K G I A +V
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ + Q+ ++WT++IV AQ+G G E++ + M+ G+KPD IT++G+L AC+H GL
Sbjct: 126 FDSMEI-QDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGL 184
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
VE G+ Y+ M+ V+ IKP P H+A M+DLLGR+G L EA + M ++PD W +LL
Sbjct: 185 VEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALL 244
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
+ACRVH N++LG+ AA L +EP N+ Y L NLYS+ GKWE+AA R+ MK GV K
Sbjct: 245 AACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSK 304
Query: 650 TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G SW+++ +KVH F ED HP+ IY+K+ +I IKE G+VPD LHD++E+
Sbjct: 305 EPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEG 364
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
KE L +HSEKLA+AFGL++ P +RI KNLR+C DCH+A+K++ + R +++RD+
Sbjct: 365 KELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSN 424
Query: 770 RFHHFKKGLCSCRDYW 785
FHHF++G CSC DYW
Sbjct: 425 CFHHFREGACSCSDYW 440
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 46/333 (13%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N +V ++ G D A F++M ++DV++W S++ G NG EAL +F M + +
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM-RIMGI 64
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
PD+ +A+ LSACA L L+ GKQ+HA +++ ++ V N+L+S YAK G +E
Sbjct: 65 HPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIE---- 120
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
A ++FDS+ +DV+ WTA++VGY QNG +
Sbjct: 121 -----------------------------DANKVFDSMEIQDVITWTALIVGYAQNGRGR 151
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEASSLSVSNAL 453
+++ + M+ G KP+ T +L S ++HG+ S G +
Sbjct: 152 ESLNFYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACM 211
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAI-QLFERMLELG 509
I + ++G + A+ + N + + + W +++ A HG LGE A LFE
Sbjct: 212 IDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFE------ 265
Query: 510 IKPDH-ITYVGVLTACTHGGLVEQGQRYYNMMK 541
++P + + YV + + G E+ + +MK
Sbjct: 266 LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMK 298
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 33/260 (12%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ YAK G D A +VF M ++D +SWT+++ G ++ A+R+F EM +
Sbjct: 6 NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P Q + +VL++C L L GK+VH+ +K+GL ++V NSL++MYAK G A V
Sbjct: 66 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M +++V +TW ++I GY+QNG E+L
Sbjct: 126 FDSMEIQDV-------------------------------ITWTALIVGYAQNGRGRESL 154
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA-LIS 321
+ BM+ S +KPD T L AC++ ++ G+ + GP A +I
Sbjct: 155 NFYNBMIA-SGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMID 213
Query: 322 CYAKVGGVEIAQKIVEQSGI 341
+ G + A++++ Q +
Sbjct: 214 LLGRSGKLMEAKELLNQMAV 233
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V+NAL+ MY+K G + A VF + ++ +SWTS++ +G EEA++LF M +
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMT-DKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 509 GIKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI PD I VL+AC ++E G Q + N +K+ + + S S+V + + G ++
Sbjct: 63 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS--GLGSSLSVDNSLVSMYAKCGCIE 120
Query: 568 EAYNFIENMPLEPDVVAWGSLL 589
+A ++M ++ DV+ W +L+
Sbjct: 121 DANKVFDSMEIQ-DVITWTALI 141
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +K GL S+ + NSL++ YAK I A KVFD M ++ + +W ++ YA+
Sbjct: 87 GKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQ 146
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR R+S+++ YN +M+ V P T +
Sbjct: 147 NGR------------GRESLNF------YN-------------BMIASGVKPDFITFIGL 175
Query: 152 LASCTALGDLSAGKK-VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L +C+ G + G+ S G+ ++++ + G M AK + + M ++
Sbjct: 176 LFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQP 235
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+ + W +++ G ++L + + E
Sbjct: 236 DATVWKALLAACRVHGNVELGERAANNLFE 265
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 264/824 (32%), Positives = 418/824 (50%), Gaps = 123/824 (14%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGL--HLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
A LQ + + G+ VH +++ G L +F N L+N Y K ++ A+++FD M
Sbjct: 63 ARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRM 122
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + S+ T++ A+A++G + A +F + W +E+
Sbjct: 123 PERNMVSFVTLVQAHAQRGDFEAAAALFR------RLRWEG-----HEV----------- 160
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
QF +T++L A+ VHS K G V + L++ Y+
Sbjct: 161 ---------NQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCS 211
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSL---------------------------------- 220
A+ VF+G+ K+ W +VS
Sbjct: 212 LVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAI 271
Query: 221 --------HIHSGRLDL---------ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
H+ LD+ AR F+ + DV+ + MI+ Y+Q+ + +A
Sbjct: 272 KTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFE 331
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F +++ SS+ P++++L+S L AC N+ +L GKQIH + I+ ++ VGNAL
Sbjct: 332 LFLRLMR-SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL---- 386
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
+D Y K D+ + +IF SLRD + V+W +
Sbjct: 387 -----------------------------MDFYAKCNDMDSSLKIFSSLRDANEVSWNTI 417
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
+VG+ Q+GL ++A+ +F M T S++L +S AS+ H QIH S +S
Sbjct: 418 VVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTF 477
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ + N+LI Y+K G I A +VF + R + +SW ++I A HG +A++LF+
Sbjct: 478 NNDTVIGNSLIDTYAKCGYIRDALKVFQHLMER-DIISWNAIISGYALHGQAADALELFD 536
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
RM + ++ + IT+V +L+ C GLV G ++ M+ H IKP+ H+ +V LLGRA
Sbjct: 537 RMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 596
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L +A FI ++P P + W +LLS+C +HKN+ LG+ +AEK+L IEP + Y L
Sbjct: 597 GRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLS 656
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y++ G + A +RKSM+ +GV+K G SWV+I+ ++H F V HP I N M
Sbjct: 657 NMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVI-NAML 715
Query: 684 KIWDEIK--EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ W +K G++PD VLHDV+++ K +ML HSE+LA+A+GL+ TP +RI+KN
Sbjct: 716 E-WLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKN 774
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR C DCH+A I K+V REI+VRD RFHHF+ G CSC DYW
Sbjct: 775 LRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 231/518 (44%), Gaps = 93/518 (17%)
Query: 135 EMVQDQVLPT-----QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV--TNSLL 187
E+ +LP+ F L C A GD G+ VH VV+ G G +++ N LL
Sbjct: 44 ELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLL 103
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
NMY K+G L AR FD+M ER++V++ +
Sbjct: 104 NMYGKLGP-------------------------------LASARRLFDRMPERNMVSFVT 132
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
++ ++Q G DFEA L+ + ++F L + L ++ L +H+ +
Sbjct: 133 LVQAHAQRG-DFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKL 191
Query: 308 EFDATGPVGNALI-------------------------------SCYAK----------- 325
D VG+ LI SCY++
Sbjct: 192 GHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRCA 251
Query: 326 ----VGGVEIAQKIVEQSGISYLNVI---AFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
+ + A++ + I LN LLD Y K GDI AR F+ + DV+
Sbjct: 252 QSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVI 311
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+ M+ Y Q+ N+ A ELF ++R PN Y+LS++L +++ LD GKQIH A
Sbjct: 312 LLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHA 371
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
++ G S L V NAL+ Y+K +++++ ++F+ + E VSW +++V +Q GLGEEA
Sbjct: 372 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE-VSWNTIVVGFSQSGLGEEA 430
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ-GQRYYNMMKNVHKIKPTPSHFASMV 557
+ +F M + +TY VL AC + GQ + ++ K+ + S++
Sbjct: 431 LSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLI 488
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
D + G +++A +++ +E D+++W +++S +H
Sbjct: 489 DTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALH 525
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 42/277 (15%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN SL S L+ +++Q + GK +H IK G +F+ N+LM+FYAK
Sbjct: 343 PNEYSLSSVLQACTNMVQLDF-------GKQIHNHAIKIGHESDLFVGNALMDFYAKCND 395
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ + K+F + SWNT I+V +++
Sbjct: 396 MDSSLKIFSSLRDANEVSWNT-------------------------------IVVGFSQS 424
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G + A+ +F EM Q+ TQ T +SVL +C + + ++H + K+ + +
Sbjct: 425 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIG 484
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IE 239
NSL++ YAK G A VF + +++ SWN ++S + G+ A FD+M +E
Sbjct: 485 NSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVE 544
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+ +T+ ++++ G L +F +M D +KP
Sbjct: 545 SNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKP 581
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/576 (39%), Positives = 343/576 (59%), Gaps = 15/576 (2%)
Query: 217 VVSLHIHS-----GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
V++L +H G++ + A F Q I+ D+ + + I S NG +A ++ +L
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-S 123
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S + P++FT +S L +C+ K GK IH ++++ V L+ YAK G V
Sbjct: 124 SEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AQK+ ++ + ++++ T ++ Y K G++ AR +FDS+ +RD+V+W M+ GY Q+G
Sbjct: 180 AQKVFDR--MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHG 237
Query: 392 LNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
DA+ LF+ ++ EG PKP+ T+ A LS S + +L+ G+ IH S ++ V
Sbjct: 238 FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVC 297
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-G 509
LI MYSK G++ A VFN R++ V+W +MI A HG ++A++LF M + G
Sbjct: 298 TGLIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITG 356
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P IT++G L AC H GLV +G R + M + IKP H+ +V LLGRAG L+ A
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y I+NM ++ D V W S+L +C++H + LGK AE L+ + NSG Y L N+Y+S
Sbjct: 417 YETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASV 476
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G +E A +R MK G+ K G S ++I+NKVH F D H + IY + KI + I
Sbjct: 477 GDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K G+VP+T +VL D+EE KEQ L+ HSE+LAIA+GLIST + L+I KNLRVC+DCH
Sbjct: 537 KSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCH 596
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K I K+ R+IV+RD RFHHF G CSC D+W
Sbjct: 597 TVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 223/459 (48%), Gaps = 46/459 (10%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AYA G++ + +F+ + D +T I T + G A ++V+++ ++ P +FT
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S+L SC+ +GK +H+ V+K GL V L+++YAK GD + A+ VFD M
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+++ S +++ + G ++ ARA FD M ERD+V+WN MI GY+Q+G+ +AL +F
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+L + KPD+ T+ + LSAC+ + L+ G+ IH ++ + V LI Y+K G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A +F+ +D+VAW AM+ GY
Sbjct: 309 SLE---------------------------------EAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 388 EQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEAS 445
+G ++DA+ LF M G +P + T L + ++ G +I S G
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLF 502
+ L+++ +AG + A ++ ++V W+S++ + HG LG+E +
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE---IA 452
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
E ++ L IK I YV + G E + N+MK
Sbjct: 453 EYLIGLNIKNSGI-YVLLSNIYASVGDYEGVAKVRNLMK 490
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 167/336 (49%), Gaps = 44/336 (13%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
S I+P EF S LKS + GKL+H ++K GL + ++ L++ YAK + A
Sbjct: 124 SEINPNEF---TFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+KVFD MP ++L S +++ YAKQG ++ A +F+ M RD VSW +I Y + G
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 128 NAIRMFVEMV-QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+A+ +F +++ + + P + TV + L++C+ +G L G+ +H FV + + V V L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MY+K G A VF+ K++ +W N
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAW-------------------------------N 329
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI-----H 301
+MIAGY+ +GY +AL +F M + L+P T TL ACA+ + G +I
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
Y I+ + + G L+S + G ++ A + ++
Sbjct: 390 EYGIKPKIEHYG----CLVSLLGRAGQLKRAYETIK 421
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/705 (34%), Positives = 374/705 (53%), Gaps = 70/705 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSV--SWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
+ + +AYA+ G L A P S +W ++ ++ A+R+F +
Sbjct: 40 SCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVF-RALPPA 98
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
P T T L++C LGDL+ G+ V G + V +S+LN+YAK G
Sbjct: 99 ARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCG------ 152
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
A+ D +++ FD+M +RD VTW++M+ G+ G +
Sbjct: 153 AMDDAVKV-------------------------FDRMRKRDRVTWSTMVTGFVNAGQPVQ 187
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ M+ M +D L+ D+ + + ACA ++G +H Y++R
Sbjct: 188 AIEMYMRMRRDG-LEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQ---------- 236
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
++V+ T+L+D Y K G ARR+F+ + R+ V+W
Sbjct: 237 -----------------------MDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSW 273
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+A++ Q G +A+ LFR M G PN+ + L S L L GK IH LR
Sbjct: 274 SALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILR 333
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+ E + V A+I MYSK G++++A+ +F+ + R + +SW MI HG G +A+
Sbjct: 334 TLELDRM-VGTAVIDMYSKCGSLSSAQMLFDKVVSR-DLISWNVMIACCGAHGRGRDALS 391
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF+ M ++PDH T+ +L+A +H GLVE+G+ ++N M N + I+P H +VDLL
Sbjct: 392 LFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLL 451
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
R+GL++EA + ++ +P + +LLS C + L+LG+ AEK+L ++P + G +
Sbjct: 452 ARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLA 511
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
+ NLY++ W +RK MK G KK G S ++I+ +H F +ED HPQ I
Sbjct: 512 LVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQ 571
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ K+ E+++MG++P T V HD+EE VKEQ+L HSE+LA AFGL++T T L ++K
Sbjct: 572 MVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIK 631
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCH AIK++ K+ DREIVVRDA RFHHFK G CSC DYW
Sbjct: 632 NLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 225/524 (42%), Gaps = 126/524 (24%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G++V R G +F+ +S++N YAK ++ A KVFD M + +W+T+++ +
Sbjct: 122 GEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVN 181
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G+ P AI M++ M +D + + + V
Sbjct: 182 AGQ-----------P--------------------VQAIEMYMRMRRDGLEADEVVIVGV 210
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C A GD G VH ++++ + V ++ SL++MYAK G A+ VF+ M +N
Sbjct: 211 MQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRND 270
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW +++I+ +Q G EALG+F M++
Sbjct: 271 VSW-------------------------------SALISQLAQYGNADEALGLF-RMMQV 298
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT-EFDATGPVGNALISCYAKVGGVE 330
S L P+ + L AC++L LKLGK IH +I+RT E D VG A+I Y+K G +
Sbjct: 299 SGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRM--VGTAVIDMYSKCGSLS 356
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
AQ +FD + RD+++W M+ +
Sbjct: 357 SAQM---------------------------------LFDKVVSRDLISWNVMIACCGAH 383
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK-----QIHASALRSGEAS 445
G +DA+ LF+ M R +P++ T +++LS S ++ GK ++ + GE
Sbjct: 384 GRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKH 443
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ + + + +++G + A + +H + S++VAL L ++L E
Sbjct: 444 LVCI----VDLLARSGLVEEANGLVASLHSKPT----ISILVALLSGCLNNNKLELGEST 495
Query: 506 LE--LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
E L ++P VGVL ++ Y KN +K++
Sbjct: 496 AEKILELQPGD---VGVLALVSN---------LYAAAKNWYKVR 527
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 36/262 (13%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
++Q+ + + +G VH +++ + + V + SL++ YAK A++VF+ MP +
Sbjct: 210 VMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRN 269
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
SW+ ++S A+ G D A +F +M VS
Sbjct: 270 DVSWSALISQLAQYGNADEALGLFRMM----QVS-------------------------- 299
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P V L +C+ LG L GK +H F+++T L V ++++MY+K G
Sbjct: 300 -GLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSS 357
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQ 254
A+ +FD + +++ SWNV+++ GR A + F +M + D T+ S+++ S
Sbjct: 358 AQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSH 417
Query: 255 NGYDFEALGMFANMLKDSSLKP 276
+G E F M+ + ++P
Sbjct: 418 SGLVEEGKFWFNCMVNEYGIEP 439
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/681 (34%), Positives = 372/681 (54%), Gaps = 76/681 (11%)
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
+S +I + + G+ K A+R+ + + P+Q T ++ C LS G +VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVLSQ----ESSPSQQTYELLILCCGHRSSLSDGLRVHRH 102
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
++ G + L+ MY+ +G +D A
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGS-------------------------------VDYA 131
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD+ +R + WN++ + G+ E LG++ M + ++ D+FT L AC
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVA 190
Query: 291 LE----KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
E L GK+IHA++ R +++ +V
Sbjct: 191 SECTADHLTKGKEIHAHLTRRGYNS---------------------------------HV 217
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
TTL+D Y + G + A +F+ + R+VV+W+AM+ Y +NG +A+ FR M+ E
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTE 277
Query: 407 --GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
PN+ T+ ++L +SLA+L+ G+ IH LR G S L V +AL+TMY + G ++
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLD 337
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+RVF+ +H R + VSW S+I + HG G +AIQ+FE ML G P +T+V VL AC
Sbjct: 338 VGQRVFDRMHDR-DVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+H GLVE+G+R + M H IKP H+A MVDLLGRA L EA +++M EP
Sbjct: 397 SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
WGSLL +CR+H N++L + A+ +L +EP N+G Y L ++Y+ W++ ++K +++
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
G++K G W++++ K++ F D +P + I+ + K+ +++KE G++P T VL++
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+E + KE+++ HSEKLA+AFGLI+T + +RI KNLR+C DCH KFI K +++EI+
Sbjct: 577 LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
VRD RFH FK G+CSC DYW
Sbjct: 637 VRDVNRFHRFKNGVCSCGDYW 657
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 209/488 (42%), Gaps = 105/488 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH I+ G FL L+ Y+ S+ YA+KVFD+ +T+ WN + A
Sbjct: 96 GLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + EV L W N IG V +FT T V
Sbjct: 156 AGHGE---EVLGLY-------WKM-----NRIG----------------VESDRFTYTYV 184
Query: 152 LASCTA----LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
L +C A L+ GK++H+ + + G + V + +L++MYA+ G A VF+GM
Sbjct: 185 LKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMP 244
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++NV SW ++MIA Y++NG FEAL F
Sbjct: 245 VRNVVSW-------------------------------SAMIACYAKNGKAFEALRTFRE 273
Query: 268 ML---KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
M+ KDSS P+ T+ S L ACA+L L+ G+ IH YI+R D+ PV +AL++ Y
Sbjct: 274 MMTETKDSS--PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 331
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ G +++ Q R+FD + DRDVV+W +++
Sbjct: 332 RCGKLDVGQ---------------------------------RVFDRMHDRDVVSWNSLI 358
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GE 443
Y +G + A+++F M+ G P T ++L S ++ GK++ S R G
Sbjct: 359 SSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGI 418
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ ++ + +A ++ A ++ + W S++ + HG E A +
Sbjct: 419 KPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASR 478
Query: 504 RMLELGIK 511
R+ L K
Sbjct: 479 RLFALEPK 486
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 370/681 (54%), Gaps = 76/681 (11%)
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
+S +I + + G+ K AIR+ + + P+Q T ++ C LS +VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
++ G + L+ MY+ +G +D A
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGS-------------------------------VDYA 131
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD+ +R + WN++ + G+ E LG++ M + ++ D+FT L AC
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVA 190
Query: 291 LE----KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
E L GK+IHA++ R + + +V
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSS---------------------------------HV 217
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
TTL+D Y + G + A +F + R+VV+W+AM+ Y +NG +A+ FR M+RE
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 407 --GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
PN+ T+ ++L +SLA+L+ GK IH LR G S L V +AL+TMY + G +
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+RVF+ +H R + VSW S+I + HG G++AIQ+FE ML G P +T+V VL AC
Sbjct: 338 VGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+H GLVE+G+R + M H IKP H+A MVDLLGRA L EA +++M EP
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
WGSLL +CR+H N++L + A+ +L +EP N+G Y L ++Y+ W++ ++K +++
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
G++K G W++++ K++ F D +P + I+ + K+ +++KE G++P T VL++
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+E + KE+++ HSEKLA+AFGLI+T + +RI KNLR+C DCH KFI K +++EI+
Sbjct: 577 LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
VRD RFH FK G+CSC DYW
Sbjct: 637 VRDVNRFHRFKNGVCSCGDYW 657
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 207/485 (42%), Gaps = 105/485 (21%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
VH I+ G FL L+ Y+ S+ YA+KVFD+ +T+ WN + A G
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ EV L W N IG V +FT T VL +
Sbjct: 159 GE---EVLGLY-------WKM-----NRIG----------------VESDRFTYTYVLKA 187
Query: 155 CTA----LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
C A + L GK++H+ + + G S V + +L++MYA+ G A VF GM ++N
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML- 269
V SW ++MIA Y++NG FEAL F M+
Sbjct: 248 VVSW-------------------------------SAMIACYAKNGKAFEALRTFREMMR 276
Query: 270 --KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
KDSS P+ T+ S L ACA+L L+ GK IH YI+R D+ PV +AL++ Y + G
Sbjct: 277 ETKDSS--PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCG 334
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E+ Q R+FD + DRDVV+W +++ Y
Sbjct: 335 KLEVGQ---------------------------------RVFDRMHDRDVVSWNSLISSY 361
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
+G K A+++F M+ G P T ++L S ++ GK++ + R G
Sbjct: 362 GVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ ++ + +A ++ A ++ + W S++ + HG E A + R+
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Query: 507 ELGIK 511
L K
Sbjct: 482 ALEPK 486
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 44/311 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA + + G V++ +L++ YA+ + YA VF MPV+ + SW+ +++ YAK
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QVLPTQFTVT 149
G+ A E A+R F EM+++ P T+
Sbjct: 261 NGK---AFE----------------------------ALRTFREMMRETKDSSPNSVTMV 289
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL +C +L L GK +H ++++ GL + V ++L+ MY + G + + VFD M +
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMF 265
+V SWN ++S + G A F++M+ VT+ S++ S G E +F
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV--GNALISCY 323
M +D +KP A + +L ++ +RTE GP G+ L SC
Sbjct: 410 ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKM-VQDMRTE---PGPKVWGSLLGSCR 465
Query: 324 AKVGGVEIAQK 334
G VE+A++
Sbjct: 466 IH-GNVELAER 475
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/570 (38%), Positives = 350/570 (61%), Gaps = 4/570 (0%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+VS + S L A FD+ RD+ ++S++ S + AL + ML +L P
Sbjct: 126 LVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSADALHP 185
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D F ++S S A L +LG+Q+HA+ + + ++ V ++L+ Y K G + +K+
Sbjct: 186 DHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVF 245
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+ +S N + +T L+ GY G A ++F S+ R++ AWTA++ G G + A
Sbjct: 246 DS--MSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGA 303
Query: 397 VELFRSMVREGPKPNN-YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
VELF M R+G + ++ + LS ++ S+ LA+ G+Q+H S +R G S++ V NALI
Sbjct: 304 VELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALID 363
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK +I +AR VF I +R + +SWT+M+V AQHG EEA+ L++RM+ G KP+ +
Sbjct: 364 MYSKCSDILSAREVFEGITFR-DVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEV 422
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T+VG++ AC+H GLV++G++ + MKN + I P H+ +DLL R+G L EA +
Sbjct: 423 TFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTT 482
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EPD WG+LLSAC +K+ ++ ++KLL + P +S Y L N+Y+ GKW+
Sbjct: 483 MPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSV 542
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
A +RK M + ++K G+SW++ + +F + R+ I + ++ E+++ G+V
Sbjct: 543 AKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYV 602
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
PDT+SV+HD+EE KE L HSE+LA+AFGLI +P + +R++KNLRVC DCH+ +K I
Sbjct: 603 PDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLI 662
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++ R+IVVRD++RFHHF+ G CSC ++W
Sbjct: 663 SEITHRKIVVRDSSRFHHFEGGKCSCSEFW 692
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 219/492 (44%), Gaps = 65/492 (13%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P + +HARI+K GL +L++ YAK+ + A +FDE P + + ++++L+
Sbjct: 100 SPAAVRGMHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLT 159
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
A + +LA + M + D + P F
Sbjct: 160 AVSHSASPELALPILRCM------------------------------LSADALHPDHFV 189
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
++SV + L G+++H+ V + +G V +SL++MY K G + VFD M
Sbjct: 190 ISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMS 249
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
KN W +VS + +GR + A F M R++ W ++I+G G A+ +F
Sbjct: 250 AKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVE 309
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D D F L+ + A+L LG+Q+H +R F + VGNALI Y+K
Sbjct: 310 MRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCS 369
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A+++ E GI++ +VI+ WT M+VG
Sbjct: 370 DILSAREVFE--GITFRDVIS-------------------------------WTTMVVGE 396
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
Q+G ++A+ L+ MV G KPN T ++ S + G+Q+ S G
Sbjct: 397 AQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPR 456
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L + + S++G++ A + + + + +W +++ A ++ E I++ +++L
Sbjct: 457 LQHYTCYLDLLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL 516
Query: 507 ELGIKPDHITYV 518
EL K D TY+
Sbjct: 517 ELRPK-DSSTYI 527
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 7/260 (2%)
Query: 22 SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS 81
+ L+SR +G+ +HA + + +K+SL++ Y K S +KVFD M K
Sbjct: 198 ARLRSRR--LGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDDGRKVFDSMSAKNSVV 255
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
W ++S YA GR + A ++F MP R+ +WT +I G A+ +FVEM +D V
Sbjct: 256 WTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGV 315
Query: 142 -LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+ F ++ V+ L G+++H ++ G + V N+L++MY+K D + A+
Sbjct: 316 RIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAR 375
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNG 256
VF+G+ ++V SW +V GR + A A +D+M+ + + VT+ +I S G
Sbjct: 376 EVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFVGLIYACSHAG 435
Query: 257 YDFEALGMFANMLKDSSLKP 276
+ +F +M + + P
Sbjct: 436 LVQKGRQLFESMKNEYGITP 455
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/630 (36%), Positives = 359/630 (56%), Gaps = 75/630 (11%)
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++ PT + + +C +L +K+H+ + + +G + NSL+++Y K G + A
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEA 105
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
VFD +M +D+V+W S+IAGY+QN
Sbjct: 106 HKVFD-------------------------------KMRNKDMVSWTSLIAGYAQNDMPA 134
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EA+G+ MLK KP+ FT AS L A +G QIHA ++ ++ VG+AL
Sbjct: 135 EAIGLLPGMLK-GRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSAL 193
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
LD Y + G + A +FD L ++ V+
Sbjct: 194 ---------------------------------LDMYARCGKMDMATAVFDKLDSKNGVS 220
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W A++ G+ + G + A+ +F M R G + ++T S++ S + + +L+ GK +HA +
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMI 280
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+S + + V N ++ MY+K+G++ AR+VF + ++ V+W SM+ A AQ+GLG+EA+
Sbjct: 281 KSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYGLGKEAV 339
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
FE M + GI + I+++ +LTAC+HGGLV++G+ Y++M+K + ++P H+ ++VDL
Sbjct: 340 SHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDL 398
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGRAGLL A FI MP+EP WG+LL+ACR+HKN +G+ AA+ + ++PD+SG
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPP 458
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+Y+S G W+ AA +RK MK GVKK SWV+I+N VH+F D HP+ + IY
Sbjct: 459 VLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIY 518
Query: 680 NKMAKIWDEI----KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
K+WDEI ++ G+VPD VL V+E +E L++HSEK+A+AF LI P T
Sbjct: 519 ----KMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGAT 574
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
+RIMKN+R+C DCHSA K+I K+ +REIV+
Sbjct: 575 IRIMKNIRICGDCHSAFKYISKVFEREIVI 604
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 197/477 (41%), Gaps = 96/477 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y + + +S+N + +HA + FL NSL++ Y K S+ A KVFD+M
Sbjct: 54 YHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K + SW ++++ YA+ D+ E L+P GRFK
Sbjct: 114 NKDMVSWTSLIAGYAQN---DMPAEAIGLLPGMLK-------------GRFK-------- 149
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
P FT S+L + A D G ++H+ VK V V ++LL+MYA+ G
Sbjct: 150 -------PNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGK 202
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MA AVFD + KN SW N++I+G+++
Sbjct: 203 MDMATAVFDKLDSKNGVSW-------------------------------NALISGFARK 231
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G AL +FA M ++ + FT +S SA A + L+ GK +HA++I++ T V
Sbjct: 232 GDGETALMVFAEMQRN-GFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFV 290
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN ++ YAK G +++D AR++F+ + ++
Sbjct: 291 GNTMLDMYAKSG-----------------------SMID----------ARKVFERVLNK 317
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V W +ML + Q GL K+AV F M + G N + +L+ S + GK
Sbjct: 318 DLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYF 377
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG +N A + W +++ A H
Sbjct: 378 DMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 160/326 (49%), Gaps = 38/326 (11%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+ L L P + ++ACA + L ++IHA++ + F + N+LI Y K
Sbjct: 40 DHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKC 99
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G V A K +FD +R++D+V+WT+++ G
Sbjct: 100 GSVVEAHK---------------------------------VFDKMRNKDMVSWTSLIAG 126
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y QN + +A+ L M++ KPN +T +++L + A G QIHA A++
Sbjct: 127 YAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHED 186
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V +AL+ MY++ G ++ A VF+ + + VSW ++I A+ G GE A+ +F M
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLD-SKNGVSWNALISGFARKGDGETALMVFAEMQ 245
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGL 565
G + H TY + +A G +EQG+ + +M+K+ K+ + +M+D+ ++G
Sbjct: 246 RNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGN--TMLDMYAKSGS 303
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSA 591
+ +A E + L D+V W S+L+A
Sbjct: 304 MIDARKVFERV-LNKDLVTWNSMLTA 328
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/729 (34%), Positives = 396/729 (54%), Gaps = 76/729 (10%)
Query: 63 SISYAKKVFDEM-----PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
SIS K + +M PV+ S + ++ A K G + A ++F+ MP R V+W +II
Sbjct: 62 SISGIKNIQAQMLKSGFPVEL--SGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSII 119
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
Y + R K A+ M+ M+ + VLP ++T++SV A DLS K+ GL
Sbjct: 120 AYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFK---AFSDLSLEKEAQR---SHGL- 172
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
AV G+ + NV + +V +++ G+ A+ D++
Sbjct: 173 -----------------------AVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 209
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
E+DVV ++I GYSQ G D EA+ F +ML + ++P+++T AS L +C NL+ + G
Sbjct: 210 EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK-VQPNEYTYASVLISCGNLKDIGNG 268
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
K IH ++++ F++ + + T+LL Y+
Sbjct: 269 KLIHGLMVKSGFESA---------------------------------LASQTSLLTMYL 295
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
+ + + +F ++ + V WT+++ G QNG + A+ FR M+R+ KPN++TLS+
Sbjct: 296 RCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSS 355
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
L S+LA + G+Q+H + G + LI +Y K G + AR VF+ +
Sbjct: 356 ALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLS-EV 414
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+ +S +MI + AQ+G G EA++LFERM+ LG++P+ +T + VL AC + GLVE+G +
Sbjct: 415 DVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELF 474
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
+ + KI T H+A MVD+LGRAG L+EA I + PD+V W +LLSAC+VH+
Sbjct: 475 DSFRK-DKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-NPDLVLWRTLLSACKVHRK 532
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
+++ + K+L I P + G L NLY+S GKW+ ++ MK + +KK SWV+
Sbjct: 533 VEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVE 592
Query: 658 IQNKVHVFGVEDWL-HPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
I + H F D HP + I + ++ + K++G+V D + V D+EE KE+ L
Sbjct: 593 IDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDMEETAKERSLHQ 652
Query: 717 HSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK 776
HSEKLAIAF + ++RI+KNLRVC DCHS IK + +++ REI+ RD+ RFHHF+
Sbjct: 653 HSEKLAIAFAVWRNV-GGSIRILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRD 711
Query: 777 GLCSCRDYW 785
G CSC DYW
Sbjct: 712 GSCSCGDYW 720
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 146/345 (42%), Gaps = 66/345 (19%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P E+ YA +L S ++ GKL+H ++K G ++ + SL+ Y + + +
Sbjct: 245 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 304
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
VF + +W +++S + GR +
Sbjct: 305 LVFKCIKYPNQVTWTSLISGLVQNGREE-------------------------------T 333
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ F +M++D V P FT++S L C+ L G++VH V K G + L+
Sbjct: 334 ALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIE 393
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+Y K G MA+ VFD + E DV++ N+M
Sbjct: 394 LYGKCGCSDMARLVFDTLS-------------------------------EVDVISLNTM 422
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I Y+QNG+ EAL +F M+ + L+P+ T+ S L AC N ++ G ++ + +
Sbjct: 423 IYSYAQNGFGREALELFERMI-NLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDK 481
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
T ++ + G +E A+ ++ + ++ +++ + TLL
Sbjct: 482 IMLTNDHYACMVDMLGRAGRLEEAEMLITE--VTNPDLVLWRTLL 524
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/770 (31%), Positives = 402/770 (52%), Gaps = 100/770 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL++ + + + +G++VHARI+K FL N L+N Y+K +
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLD--------------- 56
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+ + RL V L P R+ VSWT+++ + G F A+ F EM
Sbjct: 57 -----------HPESARL-----VLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMR 100
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++ V P FT V + +L GK++H+ VK G V V S +MY K
Sbjct: 101 REGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT---- 156
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
RL+ D AR FD++ ER++ TWN+ I+ +G
Sbjct: 157 ---------RLR------------------DDARKLFDEIPERNLETWNAYISNSVTDGR 189
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EA+ F + +P+ T L+AC++ L LG Q+H + R+ FD V N
Sbjct: 190 PKEAIEAFIEFRRIGG-QPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYN 248
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
LI Y K + ++ I + G+ ++
Sbjct: 249 GLIDFYGKCKQIRSSEIIFAEMGM---------------------------------KNA 275
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V+W +++ Y QN ++ A L+ +E + +++ +S++LS + +A L+ G+ IHA
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A+++ ++ V +AL+ MY K G I + + F+ + + V+ S+I A G +
Sbjct: 336 AVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTLNSLIGGYAHQGQVDM 394
Query: 498 AIQLFERMLELGI--KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
A+ LFE M G P+++T+V +L+AC+ G VE G + ++ MK+ + I+P H++
Sbjct: 395 ALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSC 454
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VD+LGRAG++++A+ FI+ MP++P + WG+L +ACR+H LG +AAE L ++P +
Sbjct: 455 IVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKD 514
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
SG + L N +++ G+W +A +R+ MK VG+KK G+SW+ ++N+VH F +D H
Sbjct: 515 SGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMN 574
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
I + K+ ++++ G+ PD L+D+EE+ K + HHSEKLA+AFGL++ P +
Sbjct: 575 KEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVP 634
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLR+C DCHS KF+ V REI+VRD RFH FK G+CSC+DYW
Sbjct: 635 IRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/655 (36%), Positives = 389/655 (59%), Gaps = 11/655 (1%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G HA IK G+ +VF N L++ Y+K ++ A K+FDEMP + + +WN I+ AY K
Sbjct: 7 GFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIWAYIK 66
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTY-NEIGRFKNAIRMFVEM--VQDQVLPTQFTV 148
L A E+F+ P++D V++ +++ Y N G NA+++F+EM + D+ +F++
Sbjct: 67 TQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRIDEFSL 126
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR- 207
T +L L S GK++HS++VKT + +SL++MY+K G VFDG
Sbjct: 127 TRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFDGCAG 186
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE-RDVVTWNSMIAGYSQNGYDFEALGMFA 266
+ ++ S N +V+ G L++ F + +E DVV+WN++I+GY QNG + +AL +F
Sbjct: 187 VLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDALKLFV 246
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+M +++ ++ ++ T+A LSACA L LKLGK++H ++++ E + + L+ Y K
Sbjct: 247 HM-EENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKC 305
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G ++ A+ + G N + T+++ G+ G++G ARR+FDSL ++ + WTA+ G
Sbjct: 306 GNMKYAELVYATIGTG--NAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTG 363
Query: 387 YEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
Y ++ + EL V+E P+ L ++L + A+L+ GKQIHA LR G
Sbjct: 364 YVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIEL 423
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ +A++ MYSK+GNI A ++F + R + V + M A HG +AIQ FE M
Sbjct: 424 DEKLVSAMVDMYSKSGNIKYAEKIFQRVTNR-DAVIYNIMTAGYAHHGHENQAIQQFEEM 482
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
LE G++PD +T+V +L+AC H GLVE G++Y+ M + + I P H+A M+DL GRA
Sbjct: 483 LERGVRPDAVTFVALLSACRHCGLVELGEKYFASMTD-YNILPEIDHYACMIDLYGRANQ 541
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
L++A F++ +P+EPD V G+ L+ACR+++N L + A EK+L IE DN Y L N+
Sbjct: 542 LEKAVAFMKRIPIEPDAVILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQLANV 601
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
Y++ GKW + IR+ M+ +KK G SWV ++N+VH+F D H +AIY+
Sbjct: 602 YAAEGKWVEMGRIRRKMRENEIKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYS 656
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 152/320 (47%), Gaps = 50/320 (15%)
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+ +K G + HA+ I+ +T N LI Y+K G + A K+ ++ + NV +
Sbjct: 1 MRSIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDE--MPERNVFTWN 58
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY-EQNGLNKDAVELFRSM--VREG 407
++ YIK ++ AR +FDS +D+V + +ML GY +G +A++LF M + +
Sbjct: 59 AIIWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDE 118
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
+ + ++L+ ML++S+ L+ +GKQ+H+ +++ S ++LI MYSK G
Sbjct: 119 TRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVC 178
Query: 468 RVFNL----------------------------IHWR----QETVSWTSMIVALAQHGLG 495
+VF+ + WR + VSW ++I Q+G
Sbjct: 179 QVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCE 238
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH------KIKPT 549
E+A++LF M E ++ + T G+L+AC G R + K VH ++
Sbjct: 239 EDALKLFVHMEENEVRWNEHTIAGLLSACA-------GLRSLKLGKEVHGWVLKYELGFN 291
Query: 550 PSHFASMVDLLGRAGLLQEA 569
P + +VD+ + G ++ A
Sbjct: 292 PFISSGLVDVYCKCGNMKYA 311
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 161/347 (46%), Gaps = 37/347 (10%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
A LL + R+ +GK VH ++K L + F+ + L++ Y K ++ YA+ V+ +
Sbjct: 261 AGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVYCKCGNMKYAELVYATIGT 320
Query: 77 KTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
S +++ ++ QG + A +F+ + + S+ WT + Y + + + + E
Sbjct: 321 GNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFTGYVKSQQCEAVFELLSEF 380
Query: 137 -VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
V++ ++P + SVL +C L+ GK++H++V++ G+ + +++++MY+K G+
Sbjct: 381 RVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIGIELDEKLVSAMVDMYSKSGN 440
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNSMIAG 251
A+ +F + ++ +N++ + + H G + A QF++M+ER D VT+ ++++
Sbjct: 441 IKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSA 500
Query: 252 YSQNGYDFEALGMFANM-------------------------------LKDSSLKPDKFT 280
G FA+M +K ++PD
Sbjct: 501 CRHCGLVELGEKYFASMTDYNILPEIDHYACMIDLYGRANQLEKAVAFMKRIPIEPDAVI 560
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
L + L+AC KL ++ I+R E D G L + YA G
Sbjct: 561 LGAFLNACRINRNTKLAREAEEKILRIEGD-NGARYVQLANVYAAEG 606
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 50/316 (15%)
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF------NLIHWR-- 476
+ S+ G + HA A+++G S++ SN LI +YSK G + A ++F N+ W
Sbjct: 1 MRSIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAI 60
Query: 477 ----------------------QETVSWTSMIVA-LAQHGLGEEAIQLFERMLELG--IK 511
++ V++ SM+ + G A++LF M L +
Sbjct: 61 IWAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETR 120
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEA 569
D + +L + G++ ++ M K S FA S++D+ + G +E
Sbjct: 121 IDEFSLTRMLNLSAKLSMESYGKQLHSYMV---KTANNISGFAVSSLIDMYSKCGCFREV 177
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ D+V+ ++++AC L++G + L E ++ +++ L + Y
Sbjct: 178 CQVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDL--ELNDVVSWNTLISGYVQN 235
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G EDA + M+ V+ W N+ + G+ R K W
Sbjct: 236 GCEEDALKLFVHMEENEVR------W----NEHTIAGLLSACAGLRSLKLGKEVHGWVLK 285
Query: 690 KEMGFVPDTASVLHDV 705
E+GF P +S L DV
Sbjct: 286 YELGFNPFISSGLVDV 301
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/701 (34%), Positives = 376/701 (53%), Gaps = 69/701 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K G + A +F+ MP RD +SW +I Y E G +++F M V
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVD 294
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+TSV+++C LGD G+ +H++V+ TG + ++V NSL MY G
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAG-------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
SW A F +M +D+V+W +MI+GY N +A+
Sbjct: 347 ----------SWRE-------------AEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAI 383
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ M+ S+KPD+ T+A+ LSACA L L G ++H I+
Sbjct: 384 DTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL------------- 429
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
ISY VI L++ Y K I A IF ++ ++V++WT+
Sbjct: 430 ------------------ISY--VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTS 469
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G N +A+ FR M + +PN TL+A L+ + + +L GK+IHA LR+G
Sbjct: 470 IIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ NAL+ MY + G +N A FN +++ SW ++ ++ G G ++LF
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNIAWNQFN--SQKKDVSSWNILLTGYSERGQGSVVVELF 586
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+RM++ ++PD IT++ +L C +V QG Y++ M+ + + P H+A +VDLLGR
Sbjct: 587 DRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLLGR 645
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG LQEA+ FI+ MP+ PD WG+LL+ACR+H N+DLG+++A+++ ++ + G Y L
Sbjct: 646 AGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILL 705
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
CNLY+ CGKW + A +R+ MK G+ G SWV+++ KVH F +D HPQ I +
Sbjct: 706 CNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++++ E+G + S D E ++++ HSE+ AIAFGLI++ + + KNL
Sbjct: 766 DGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNL 825
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+C CH +KFI K V REI VRD+ FHHFK G CSC D
Sbjct: 826 NMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 267/580 (46%), Gaps = 90/580 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQV 141
N L+ + + G L A VF M R+ SW ++ Y + G F AI ++ M+ V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +T VL +C + DL+ G++VH VV+ G ++V N+L+ MY K GD A+
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+FD M +++ SW N+MI+GY +NG E
Sbjct: 253 LFDRMPRRDIISW-------------------------------NAMISGYFENGMGHEG 281
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + S+ PD TL S +SAC L +LG+ IHAY+I T F V N+L
Sbjct: 282 LKLFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y G A+K+ F + +D+V+WT
Sbjct: 341 MYLYAGSWREAEKL---------------------------------FSRMDCKDIVSWT 367
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
M+ GYE N L + A++ +R M ++ KP+ T++A+LS ++L LD G ++H A+++
Sbjct: 368 TMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S + V+N LI MYSK I+ A +F+ I R+ +SWTS+I L + EA+ +
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNRCFEAL-I 485
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDL 559
F R +++ ++P+ IT L AC G + G+ + +V + F +++D+
Sbjct: 486 FFRQMKMTLQPNAITLTAALAACARIGALMCGKEIH---AHVLRTGVGLDDFLPNALLDM 542
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL-----LLIEPD 614
R G + A+N + + DV +W LL+ + G + E + PD
Sbjct: 543 YVRCGRMNIAWNQFNSQ--KKDVSSWNILLTG---YSERGQGSVVVELFDRMVKARVRPD 597
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
S LC CGK + +R+ + Y + G +
Sbjct: 598 EITFISLLC----GCGK---SQMVRQGLMYFSKMEEYGVT 630
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 221/472 (46%), Gaps = 67/472 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G+ + A+++ M + +V + +++ C G KV+S + + S V +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELG 132
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+ L M+ + G+ V +W V F +M ER++
Sbjct: 133 NAFLAMFVRFGNL--------------VDAWYV-----------------FGKMSERNLF 161
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+WN ++ GY++ GY EA+ ++ ML +KPD +T L C + L G+++H +
Sbjct: 162 SWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVH 221
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
++R ++ V NALI+ Y +K GD+
Sbjct: 222 VVRYGYELDIDVVNALITMY---------------------------------VKCGDVK 248
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR +FD + RD+++W AM+ GY +NG+ + ++LF +M P+ TL++++S
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACE 308
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
L G+ IHA + +G A +SV N+L MY AG+ A ++F+ + + + VSWT
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCK-DIVSWT 367
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI + L E+AI + M + +KPD IT VL+AC G ++ G + +
Sbjct: 368 TMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
I +++++ + + +A + N+P +V++W S+++ R++
Sbjct: 428 RLISYVIVA-NNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 197/481 (40%), Gaps = 104/481 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +I G + + + NSL Y S A+K+F M K + SW T++S Y
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+N +P + AI + M QD V P + TV +
Sbjct: 375 -----------YNFLPEK--------------------AIDTYRMMDQDSVKPDEITVAA 403
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C LGDL G ++H +K L V V N+L+NMY+K A +F + KN
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V++W S+IAG N FEAL F M
Sbjct: 464 -------------------------------VISWTSIIAGLRLNNRCFEALIFFRQM-- 490
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+L+P+ TL + L+ACA + L GK+IHA+++RT + NAL
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL----------- 539
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
LD Y++ G + A F+S + +DV +W +L GY +
Sbjct: 540 ----------------------LDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSER 576
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G VELF MV+ +P+ T ++L + G + G +L
Sbjct: 577 GQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHY 636
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERMLE 507
++ + +AG + A + + + W +++ A H LGE + Q R+ E
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQ---RIFE 693
Query: 508 L 508
L
Sbjct: 694 L 694
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/610 (37%), Positives = 356/610 (58%), Gaps = 48/610 (7%)
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
++ C +++N ++A+V ++ + F G +L V+ +N + G + A FD
Sbjct: 49 VNSCPSISNCR-EIHARVFKSLLYRDGFIGDQL--VTCYNKL-------GYAEDALKLFD 98
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
M +D+V+WNS+I+G+S+ + +L F M + S+KP++ T+ S +SAC+ L
Sbjct: 99 DMPHKDLVSWNSLISGFSRCLH--MSLTAFYTMKFEMSVKPNEVTILSMISACSG--ALD 154
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
GK IH + I KVGG L V +L++
Sbjct: 155 AGKYIHGFGI-------------------KVGGT--------------LEVKVANSLINM 181
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y K GD+ A R+F+++ D + V+W +++ NG ++ ++ F M R G + + T+
Sbjct: 182 YGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTI 241
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
A+L L + IH +G + ++++ AL+ Y+K G ++A+ VF + +
Sbjct: 242 LALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGF 301
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ V+WT+M+ A HGLG EAI+LFE M G++PDH+T+ +L+AC+H GLV +G+
Sbjct: 302 -ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKS 360
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
Y+N+M V+ I+P H++ MVDLLGR GLL +AY I+NMP+EP+ WG+LL ACRVH
Sbjct: 361 YFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVH 420
Query: 596 KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
N++LGK AE L+ +EP + Y L N+YS+ W+DAA +R +K G+K+T G+S
Sbjct: 421 GNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSS 480
Query: 656 VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR 715
++ NK H F V D HP+ + IY+K+ ++ +I++ G+ T VL DVEE+VKE M+
Sbjct: 481 IEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMIN 540
Query: 716 HHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFK 775
HSEKLAIAFGL+ + E L I KNLR+C DCHS K I + R I++RD RFHHF
Sbjct: 541 KHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFS 600
Query: 776 KGLCSCRDYW 785
G CSC DYW
Sbjct: 601 DGFCSCADYW 610
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 202/470 (42%), Gaps = 103/470 (21%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HAR+ K L+ F+ + L+ Y K A K+FD+MP K L SWN+++S +++
Sbjct: 61 IHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC-- 118
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L ++ F M +F+ +++ P + T+ S++++
Sbjct: 119 LHMSLTAFYTM-------------------KFEMSVK-----------PNEVTILSMISA 148
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C+ G L AGK +H F +K G + V V NSL+NMY K GD A +F+ + N SW
Sbjct: 149 CS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSW 206
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
NS+IA NG E + F N ++ +
Sbjct: 207 -------------------------------NSIIAAQVTNGCAREGIDYF-NKMRRLGI 234
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+ D+ T+ + L AC +L KL + IH + T F A + AL+ YAK+G + +
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYG 294
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + G + + +A+T +L G Y +GL +
Sbjct: 295 VFTEVG--FADRVAWTAMLAG-------------------------------YAAHGLGR 321
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNAL 453
+A++LF SM +G +P++ T + +LS S ++ GK + + G + + +
Sbjct: 322 EAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCM 381
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
+ + + G +N A V + W +++ A HG LG+E +
Sbjct: 382 VDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAE 431
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 63/267 (23%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H IK G L V + NSL+N Y K+ ++ A ++F+ +P SWN+I++A
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + FN M R+ +E QD+ T+ ++
Sbjct: 216 NGCAREGIDYFNKMR------------------------RLGIE--QDEG-----TILAL 244
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C LG + +H + TG + + +LL+ YAK+
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKL------------------ 286
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
GRL + F ++ D V W +M+AGY+ +G EA+ +F +M +
Sbjct: 287 -------------GRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESM-AN 332
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGK 298
L+PD T LSAC++ + GK
Sbjct: 333 KGLEPDHVTFTHLLSACSHSGLVNEGK 359
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 31 VGKL---VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
VGKL +H + G + + +L++ YAK +S + VF E+ +W +L+
Sbjct: 253 VGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLA 312
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
YA G +GR AI++F M + P T
Sbjct: 313 GYAAHG-----------------------------LGR--EAIKLFESMANKGLEPDHVT 341
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +L++C+ G ++ GK + + + G+ V+ + ++++ + G A V M
Sbjct: 342 FTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNM 401
Query: 207 RLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
++ N W ++ G ++L + + +I
Sbjct: 402 PMEPNAGVWGALLGACRVHGNIELGKEVAEHLI 434
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/701 (34%), Positives = 375/701 (53%), Gaps = 69/701 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K G + A +F+ MP RD +SW +I Y E G + +F M V
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+TSV+++C LGD G+ +H++V+ TG + ++V NSL MY G
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG-------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
SW A F +M +D+V+W +MI+GY N +A+
Sbjct: 347 ----------SWRE-------------AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ M+ S+KPD+ T+A+ LSACA L L G ++H I+
Sbjct: 384 DTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL------------- 429
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
ISY VI L++ Y K I A IF ++ ++V++WT+
Sbjct: 430 ------------------ISY--VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTS 469
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G N +A+ R M + +PN TL+A L+ + + +L GK+IHA LR+G
Sbjct: 470 IIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ NAL+ MY + G +N A FN +++ SW ++ ++ G G ++LF
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDVTSWNILLTGYSERGQGSMVVELF 586
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+RM++ ++PD IT++ +L C+ +V QG Y++ M++ + + P H+A +VDLLGR
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGR 645
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG LQEA+ FI+ MP+ PD WG+LL+ACR+H +DLG+++A+ + ++ + G Y L
Sbjct: 646 AGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILL 705
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
CNLY+ CGKW + A +R+ MK G+ G SWV+++ KVH F +D HPQ I +
Sbjct: 706 CNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++++ E+G + S D E ++++ HSE+ AIAFGLI+T + + KNL
Sbjct: 766 EGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNL 825
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+C +CH +KFI K V REI VRDA FHHFK G CSC D
Sbjct: 826 SMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 246/512 (48%), Gaps = 75/512 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQV 141
N L+ + + G L A VF M R+ SW ++ Y + G F A+ ++ M+ V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +T VL +C + DL+ GK+VH VV+ G ++V N+L+ MY K GD
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD------ 246
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+ AR FD+M RD+++WN+MI+GY +NG E
Sbjct: 247 -------------------------VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEG 281
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + S+ PD TL S +SAC L +LG+ IHAY+I T F V N+L
Sbjct: 282 LELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y G A+K+ F + +D+V+WT
Sbjct: 341 MYLNAGSWREAEKL---------------------------------FSRMERKDIVSWT 367
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
M+ GYE N L A++ +R M ++ KP+ T++A+LS ++L LD G ++H A+++
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S + V+N LI MYSK I+ A +F+ I R+ +SWTS+I L + EA+ +
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNRCFEAL-I 485
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDL 559
F R +++ ++P+ IT L AC G + G+ + +V + F +++D+
Sbjct: 486 FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIH---AHVLRTGVGLDDFLPNALLDM 542
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
R G + A++ + + DV +W LL+
Sbjct: 543 YVRCGRMNTAWSQFNSQ--KKDVTSWNILLTG 572
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 222/472 (47%), Gaps = 67/472 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G+ + A+++ M + +V + +++ C G KV+S + + S V +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+ L M+ + G+ V +W V F +M ER++
Sbjct: 133 NAFLAMFVRFGNL--------------VDAWYV-----------------FGKMSERNLF 161
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+WN ++ GY++ GY EA+ ++ ML +KPD +T L C + L GK++H +
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
++R ++ V NALI+ Y +K GD+
Sbjct: 222 VVRYGYELDIDVVNALITMY---------------------------------VKCGDVK 248
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR +FD + RD+++W AM+ GY +NG+ + +ELF +M P+ TL++++S
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
L G+ IHA + +G A +SV N+L MY AG+ A ++F+ + R++ VSWT
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWT 367
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI + L ++AI + M + +KPD IT VL+AC G ++ G + +
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
I +++++ + + +A + N+P +V++W S+++ R++
Sbjct: 428 RLISYVIVA-NNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 200/477 (41%), Gaps = 102/477 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +I G + + + NSL Y S A+K+F M K + SW T++S Y
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+N +P++ AI + M QD V P + TV +
Sbjct: 375 -----------YNFLPDK--------------------AIDTYRMMDQDSVKPDEITVAA 403
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C LGDL G ++H +K L V V N+L+NMY+K A +F + KN
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V++W S+IAG N FEAL +F +K
Sbjct: 464 -------------------------------VISWTSIIAGLRLNNRCFEAL-IFLRQMK 491
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+L+P+ TL + L+ACA + L GK+IHA+++RT + NA
Sbjct: 492 -MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA------------ 538
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
LLD Y++ G + A F+S + +DV +W +L GY +
Sbjct: 539 ---------------------LLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSER 576
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G VELF MV+ +P+ T ++L S + G + G +L
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHY 636
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQ-LFE 503
++ + +AG + A + + + W +++ A H LGE + Q +FE
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFE 693
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/570 (40%), Positives = 352/570 (61%), Gaps = 19/570 (3%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
LD + FD++ + WN+M+ Y Q+ +AL ++ M+K++ + PD +T +
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNN-VGPDNYTYPLVVQ 137
Query: 287 ACANLEKLKLG-KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
ACA + L+ G K+IH ++++ FD+ V N LI+ YA G + A+K+ ++S + L+
Sbjct: 138 ACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPV--LD 194
Query: 346 VIAFTTLLDGYIKIGDIG---PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
+++ ++L GY+K GD+G A ++F+ + ++D+V+W+A++ GYEQNG+ ++A+ +F
Sbjct: 195 SVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIE 254
Query: 403 MVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS---- 458
M G + + + ++LS + L+ + GK IH +R G S +++ NALI MYS
Sbjct: 255 MNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYM 314
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K G + A VFN + + SW ++I+ LA +GL E ++ +F M G+ P+ IT++
Sbjct: 315 KCGCVENALEVFNGME-EKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFM 373
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
GVL AC H GLV++G+ ++ M H I+P H+ MVDLLGRAGLL EA IE+MP+
Sbjct: 374 GVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPM 433
Query: 579 EPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANI 638
PDV WG+LL AC+ H + ++G+ KL+ ++PD+ G + L N+++S G WED +
Sbjct: 434 APDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEV 493
Query: 639 RKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHP---QRDAIYNKMAKIWDEIKEMGFV 695
R MK GV KT G S ++ VH F D HP + + + N+MAK +K G+
Sbjct: 494 RGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAK---RLKMEGYA 550
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
PDT V D++E+ KE L HSEKLAIAFGL++ T +RIMKNLR+CNDCH+A K I
Sbjct: 551 PDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLI 610
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K REIVVRD RFH+FK+G CSC DYW
Sbjct: 611 SKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 214/424 (50%), Gaps = 36/424 (8%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
LD + ++F+ + N + W T++ Y + + A+ ++ MV++ V P +T V+ +
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C GK++H V+K G V V N+L+NMYA G+ A+ +FD + + SW
Sbjct: 139 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 198
Query: 215 NVVVSLHIHSGRLDL---ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
N +++ ++ G + A F++M E+D+V+W+++I+GY QNG EAL MF M
Sbjct: 199 NSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM-NA 257
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ ++ D+ + S LSACA+L +K GK IH +IR ++ + NALI Y+
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS------- 310
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D Y+K G + A +F+ + ++ V +W A+++G NG
Sbjct: 311 ----------------------DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNG 348
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-RSGEASSLSVS 450
L + ++++F M G PN T +L + +D G+ AS + + G ++
Sbjct: 349 LVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHY 408
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
++ + +AG +N A ++ + + +W +++ A +HG E ++ +++EL
Sbjct: 409 GCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIEL-- 466
Query: 511 KPDH 514
+PDH
Sbjct: 467 QPDH 470
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 41/347 (11%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F GK +H ++K G V+++N+L+N YA ++ A+K+FDE PV SWN+IL+ Y
Sbjct: 146 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 205
Query: 90 AKQGRLDLACE---VFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
K+G + E +FN M +D VSW+ +I Y + G ++ A+ MF+EM + + +
Sbjct: 206 VKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEV 265
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA----KVGDEMMAKAV 202
V SVL++C L + GK +H V++ G+ VN+ N+L++MY+ K G A V
Sbjct: 266 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEV 325
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+GM K VSSW N++I G + NG +L
Sbjct: 326 FNGMEEKGVSSW-------------------------------NALIIGLAVNGLVERSL 354
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALIS 321
MF+ M K++ + P++ T L AC ++ + G+ A +I + ++
Sbjct: 355 DMFSEM-KNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVD 413
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ G + A+K++E ++ +V + LL K GD R+
Sbjct: 414 LLGRAGLLNEAEKLIESMPMAP-DVATWGALLGACKKHGDTEMGERV 459
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/657 (37%), Positives = 365/657 (55%), Gaps = 78/657 (11%)
Query: 144 TQFTVTSVLAS--------CTALGDLSAGKK-----VHSFVVKTGLSGCVNVTNSLLNMY 190
+ F VTS L++ C L A K +H+F ++ G+ LLN
Sbjct: 2 SMFHVTSFLSTTPEYPLTKCIYLLQFCASSKHKLRXIHAFSIRHGV---------LLN-- 50
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+M +F + L S+ + ++ + L A F + +V TWN+M
Sbjct: 51 ---NPDMGKHLIFTIVSLSAPMSY----AYNVFTWVLSYAYNVFTMIHNPNVFTWNTMTR 103
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GY+++ AL + M+ S ++PD T L A + ++ G+ IH+ IR F+
Sbjct: 104 GYAESDNPSPALRFYRQMIV-SRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFE 162
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ V N+L+ YA G E A +F+
Sbjct: 163 SLVFVQNSLLHIYAACGDTE---------------------------------SAHNVFE 189
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+RDRD+VA +++ G+ NG +A+ LFR M EG +P+ +T+ ++LS S+ L +L+
Sbjct: 190 LMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALEL 249
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE--TVSWTSMIVA 488
G+++H L+ G + V+N+L+ +Y+K I W E VSWTS+IV
Sbjct: 250 GRRVHVYLLKVGLRENSHVTNSLLDLYAKCDAI-----------WEXERNAVSWTSLIVG 298
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
LA +G GEEA++LF M G+ P IT+VGVL AC+H G++++G Y+ MK I P
Sbjct: 299 LAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMP 358
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
H+ MVDLL RAGL+++AY +I+NMP++P+ V W +LL AC +H +L LG+ A L
Sbjct: 359 RIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHL 418
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
L +EP +SG Y L NLY+S +W D IR+SM GVKKT G+S V++ N+V+ F +
Sbjct: 419 LKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMG 478
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
+ HPQ +Y + KI + +K G+VP TA+VL D+EE+ KEQ L +HSEK AIAF +
Sbjct: 479 NRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRL 538
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T TT+R+MKNLRVC DCH AIK + K+ DREIV+RD RFHHF+ G CSC+DYW
Sbjct: 539 NTAPGTTIRVMKNLRVCADCHMAIKLMAKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 209/509 (41%), Gaps = 106/509 (20%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSV--FLKNSLMNFYAKTESISYAKK 69
PL +LLQ S++ + +HA I+ G+ L+ K+ + + + +SYA
Sbjct: 17 PLTKCIYLLQFCASSKHKL--RXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYN 74
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VF +W L A VF ++ N + +W T+ Y E A
Sbjct: 75 VF---------TW-----------VLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPA 114
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+R + +M+ ++ P T +L + + ++ G+ +HS ++ G V V NSLL++
Sbjct: 115 LRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHI 174
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YA GD A VF+ MR +RD+V S+I
Sbjct: 175 YAACGDTESAHNVFELMR-------------------------------DRDLVAXISVI 203
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
G++ NG EAL +F M + ++PD FT+ S LSA A L L+LG+++H Y+++
Sbjct: 204 NGFALNGRPSEALTLFREMSAE-GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGL 262
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
V N+L+ YAK + +
Sbjct: 263 RENSHVTNSLLDLYAKCDAIWEXE------------------------------------ 286
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
R+ V+WT+++VG NG ++A+ELFR M +G P+ T +L S LD
Sbjct: 287 -----RNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLD 341
Query: 430 HG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G G + ++ + S+AG + A + + V+W +++ A
Sbjct: 342 EGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGA 401
Query: 489 LAQH---GLGEEAIQLFERMLELGIKPDH 514
H GLGE A R L ++P H
Sbjct: 402 CTIHGHLGLGETA-----RSHLLKLEPKH 425
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 173/406 (42%), Gaps = 79/406 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL++ KS N G+ +H+ I+ G VF++NSL++ YA
Sbjct: 133 YPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAAC-------------- 178
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
G + A VF LM +RD V+ ++I + GR A+ +F E
Sbjct: 179 -----------------GDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFRE 221
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V P FTV S+L++ LG L G++VH +++K GL +VTNSLL++YAK
Sbjct: 222 MSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAK--- 278
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+++ ER+ V+W S+I G + N
Sbjct: 279 ---CDAIWE---------------------------------XERNAVSWTSLIVGLAVN 302
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G+ EAL +F M + L P + T L AC++ L G + ++ EF +
Sbjct: 303 GFGEEALELFREM-EGQGLVPSEITFVGVLYACSHCGMLDEGFD-YFRRMKEEFGIMPRI 360
Query: 316 GN--ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG---PARRIFD 370
+ ++ ++ G V+ A + ++ + N + + TLL G +G AR
Sbjct: 361 EHYGCMVDLLSRAGLVKQAYEYIQNMPVQ-PNAVTWRTLLGACTIHGHLGLGETARSHLL 419
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG-PKPNNYTL 415
L + + + Y D + RSM+++G K + Y+L
Sbjct: 420 KLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSL 465
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/622 (37%), Positives = 351/622 (56%), Gaps = 68/622 (10%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
L AR+ FD++ R ++ WN++I Y +N + + + +F ++ + PD FTL +
Sbjct: 63 LGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHE--YLPDNFTLPCVIK 120
Query: 287 ACANLEKLKLGKQIHAYIIRTEF-------------------------------DATGPV 315
CA L ++ GKQIH ++ F D +
Sbjct: 121 GCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVL 180
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI YA+ G ++IA ++ E+ + + ++T L+DG K G + AR++FD + R
Sbjct: 181 WNSLIDGYARCGEIDIALQLFEE--MPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCR 238
Query: 376 DVVAWTAML-------------------------------VGYEQNGLNKDAVELFRSMV 404
++V+W AM+ GYE NG DAV++F M+
Sbjct: 239 NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMML 298
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+ G +P++ TL ++LS S LA L G+ IH+ ++G + +LI MY+K G I
Sbjct: 299 KLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIE 358
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+A VF I +++ WT++IV L HG+ A+ LF M + G+KP+ I ++GVL AC
Sbjct: 359 SALTVFRAIQ-KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNAC 417
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
H GLV+ G++Y++MM N +KI+PT H+ +VD+L RAG L+EA N IENMP+ P+ V
Sbjct: 418 NHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVI 477
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
W SLL R H +D+G+ AA++++ + P+ G Y L N+Y++ G WE +++R+ M
Sbjct: 478 WMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYK 537
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
G +K G S V+ + +H F V D HPQ IY KM+++ +++K +G VPDT VL
Sbjct: 538 RGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLC 597
Query: 705 VE-EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
+E E KE L +HSE+LAIAFGLI+ +RIMKNLRVCNDCHS K + K+ REI
Sbjct: 598 IEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREI 657
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRD RFHHFK G CSC DYW
Sbjct: 658 IVRDNCRFHHFKNGSCSCMDYW 679
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/549 (26%), Positives = 228/549 (41%), Gaps = 139/549 (25%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYA--KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+HA +K + F+ + L+ Y+ K + YA+ +FD + ++L WNTI+ Y +
Sbjct: 32 LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE- 90
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
N+ S + I +F E+V + LP FT+ V+
Sbjct: 91 --------------NQFS----------------HDGIVLFHELVH-EYLPDNFTLPCVI 119
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
C LG + GK++H +K G V V SL+NMY+K G+ A+ VFDGM K+V
Sbjct: 120 KGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVV 179
Query: 213 SWNVVVSLHIHSGRLDL-------------------------------ARAQFDQMIERD 241
WN ++ + G +D+ AR FDQM R+
Sbjct: 180 LWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRN 239
Query: 242 VVTWNSM-------------------------------IAGYSQNGYDFEALGMFANMLK 270
+V+WN+M IAGY NG +A+ MF MLK
Sbjct: 240 LVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK 299
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S +P TL S LSA + L L G+ IH+Y+ + F+ G +G +LI YAK G +E
Sbjct: 300 LGS-RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIE 358
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A +F +++ + V WTA++VG +
Sbjct: 359 ---------------------------------SALTVFRAIQKKKVGHWTAIIVGLGIH 385
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSV 449
G+ A+ LF M + G KPN +L+ + +D G+Q + + +L
Sbjct: 386 GMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEH 445
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERML 506
L+ + +AG++ A+ + V W S++ HG +GE A Q R++
Sbjct: 446 YGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQ---RVI 502
Query: 507 ELGIKPDHI 515
E + P+ I
Sbjct: 503 E--VAPETI 509
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 165/409 (40%), Gaps = 109/409 (26%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H +K G VF++ SL+N Y+K I A+KVFD M K + WN+++ YA+
Sbjct: 131 GKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYAR 190
Query: 92 QGRLDLACEVFNLMPNRDS-------------------------------VSWTTII--- 117
G +D+A ++F MP RD+ VSW +I
Sbjct: 191 CGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGY 250
Query: 118 ---------------------VTYNEI-------GRFKNAIRMFVEMVQDQVLPTQFTVT 149
VT+N + G+F +A++MF M++ P+ T+
Sbjct: 251 MKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLV 310
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL++ + L L G+ +HS++ K G + SL+ MYAK G A VF ++ K
Sbjct: 311 SVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKK 370
Query: 210 NVSSWN-VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
V W ++V L IH G AL +F M
Sbjct: 371 KVGHWTAIIVGLGIH--------------------------------GMANHALALFLEM 398
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQ-----IHAYIIRTEFDATGPVGNALISCY 323
K + LKP+ L+AC + + G+Q ++ Y I + G L+
Sbjct: 399 CK-TGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYG----CLVDIL 453
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLD----GYIKIGDIGPARRI 368
+ G +E A+ +E IS VI + L G I IG+ R I
Sbjct: 454 CRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVI 502
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 432 KQIHASALRSGEASSLSVSNALITMYS--KAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
+Q+HA +L++ + VS+ L+ +YS K ++ AR +F+ I R+ + W ++I
Sbjct: 30 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQ-RRSLIHWNTIIKCY 88
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
++ + I LF ++ + PD+ T V+ C G+V++G++ + + KI
Sbjct: 89 VENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGL---ALKIGFG 144
Query: 550 PSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
F S+V++ + G + A + M ++ DVV W SL+ +D IA +
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGYARCGEID---IALQL 200
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+ ++ +++ L + S CGK E A + M
Sbjct: 201 FEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQM 235
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/549 (38%), Positives = 338/549 (61%), Gaps = 11/549 (2%)
Query: 245 WNSMIAGYSQ-----NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
WN++I + Q G + +F M + ++PD T L + A+ L LG+
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRM-RFHGVQPDFHTFPFLLQSFASPSLLHLGRS 85
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+HA I+R V +LIS Y+ G + A+++ ++ I ++ ++ ++++ +
Sbjct: 86 VHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDE--IPQPDLPSWNSIINANFQA 143
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP---KPNNYTLS 416
G + AR +F + +R+V++W+ M+ GY + G K+A+ LFR M G +PN +T+S
Sbjct: 144 GLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMS 203
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L+ L +L+HGK HA + G + + ALI MY+K G++ A VF+ +
Sbjct: 204 GVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPN 263
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
++ ++W++MI LA HGL EE + LF +M+ G++P+ +T++ V AC HGGLV +G+ Y
Sbjct: 264 KDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDY 323
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
M + I PT H+ MVDL GRAG ++EA+N +++MP+EPDV+ WG+LLS R+H
Sbjct: 324 LRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 383
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
+++ ++A +KL+ +EP NSGAY L N+Y+ G+WED ++R M+ +G+KK G S +
Sbjct: 384 DIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLI 443
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
++ +H F V D HP+ I+ + +I + +K G+V +T VL D++E+ KE L
Sbjct: 444 EVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSL 503
Query: 717 HSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK 776
HSEKLA+A+G + T T +RI+KNLR+C DCH AIK I K+ DREI+VRD RFHHF +
Sbjct: 504 HSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQ 563
Query: 777 GLCSCRDYW 785
GLCSCRDYW
Sbjct: 564 GLCSCRDYW 572
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 194/414 (46%), Gaps = 46/414 (11%)
Query: 106 PNRDSVSWTTIIVTY-----NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
P +S W T+I + G + I +FV M V P T +L S +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
L G+ VH+ +++ GL+ V SL++MY+ G+ A+ VFD + ++ SWN +++
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF--ANMLKDSSLKPDK 278
+ +G +D+AR F M ER+V++W+ MI GY + G EAL +F ML + ++P++
Sbjct: 140 NFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 199
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
FT++ L+AC L L+ GK HAYI + +G ALI YAK G VE A +
Sbjct: 200 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWV--- 256
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
++GP ++DV+AW+AM+ G +GL ++ V
Sbjct: 257 --------------------FSNLGP---------NKDVMAWSAMISGLAMHGLAEECVG 287
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS----NALI 454
LF M+ +G +PN T A+ + GK R E S+ + ++
Sbjct: 288 LFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDY---LRRMTEDYSIIPTIQHYGCMV 344
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+Y +AG I A V + + + W +++ HG E ++++EL
Sbjct: 345 DLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIEL 398
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 182/354 (51%), Gaps = 42/354 (11%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LLQS +G+ VHA+I++ GL + F++ SL++ Y+ ++ +A++VFDE+P
Sbjct: 67 FPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIP 126
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
L SWN+I++A + G +D+A +F +MP R+ +SW+ +I Y G++K A+ +F E
Sbjct: 127 QPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFRE 186
Query: 136 MVQ---DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
M + V P +FT++ VLA+C LG L GK H+++ K G+ V + +L++MYAK
Sbjct: 187 MQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAK 246
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
G A VF + +DV+ W++MI+G
Sbjct: 247 CGSVEKATWVFSNLGPN------------------------------KDVMAWSAMISGL 276
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR-TEFDA 311
+ +G E +G+F+ M+ + ++P+ T + AC + + GK Y+ R TE +
Sbjct: 277 AMHGLAEECVGLFSKMI-NQGVRPNAVTFLAVFCACVHGGLVSEGKD---YLRRMTEDYS 332
Query: 312 TGPV---GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
P ++ Y + G ++ A +V+ + +V+ + LL G GDI
Sbjct: 333 IIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPME-PDVLVWGALLSGSRMHGDI 385
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/565 (39%), Positives = 339/565 (60%), Gaps = 40/565 (7%)
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
K VFD + +V S S ++ S R F+ M +RD+V+WN++I+G +QNG
Sbjct: 124 KKVFDEGKTSDVYSKKEKESYYLGS-----LRKVFEMMPKRDIVSWNTVISGNAQNGMHE 178
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+AL M M ++ L+PD FTL+S L A L GK+IH Y IR +DA +G++L
Sbjct: 179 DALMMVREM-GNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 237
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
I YAK V+ + R+F L D ++
Sbjct: 238 IDMYAKCTRVD---------------------------------DSCRVFYMLPQHDGIS 264
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W +++ G QNG+ + ++ F+ M+ KPN+ + S+++ + L +L GKQ+H +
Sbjct: 265 WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 324
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
RS ++ +++AL+ MY+K GNI AR +F+ + + VSWT+MI+ A HG +AI
Sbjct: 325 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL-YDMVSWTAMIMGYALHGHAYDAI 383
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LF+RM G+KP+++ ++ VLTAC+H GLV++ +Y+N M ++I P H+A++ DL
Sbjct: 384 SLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 443
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGR G L+EAY FI +M +EP W +LL+ACRVHKN++L + ++KL ++P N GAY
Sbjct: 444 LGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAY 503
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L N+YS+ G+W+DA +R +M+ G+KK SW++I+NKVH F D HP D I
Sbjct: 504 VLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRIN 563
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+ + ++++ G+V DT VLHDVEE+ K +L HSE+LAI FG+ISTP TT+R+
Sbjct: 564 EALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVT 623
Query: 740 KNLRVCNDCHSAIKFICKLVDREIV 764
KNLRVC DCH+A KFI K+V REIV
Sbjct: 624 KNLRVCVDCHTATKFISKIVGREIV 648
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 189/426 (44%), Gaps = 71/426 (16%)
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
KKVFDE + S S Y R +VF +MP RD VSW T+I + G +
Sbjct: 124 KKVFDEGKTSDVYSKKEKESYYLGSLR-----KVFEMMPKRDIVSWNTVISGNAQNGMHE 178
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLL 187
+A+ M EM + P FT++SVL +L GK++H + ++ G V + +SL+
Sbjct: 179 DALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLI 238
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
+MYAK R+D + F + + D ++WNS
Sbjct: 239 DMYAKC-------------------------------TRVDDSCRVFYMLPQHDGISWNS 267
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
+IAG QNG E L F ML + +KP+ + +S + ACA+L L LGKQ+H YIIR+
Sbjct: 268 IIAGCVQNGMFDEGLKFFQQMLI-AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 326
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
FD + +AL+ YAK G +I AR
Sbjct: 327 RFDGNVFIASALVDMYAKCG---------------------------------NIRTARW 353
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
IFD + D+V+WTAM++GY +G DA+ LF+ M EG KPN A+L+ S
Sbjct: 354 IFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGL 413
Query: 428 LDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+D + S + L A+ + + G + A + +H W++++
Sbjct: 414 VDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLL 473
Query: 487 VALAQH 492
A H
Sbjct: 474 AACRVH 479
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 187/374 (50%), Gaps = 59/374 (15%)
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK---------- 325
PD S L +C ++ L+ G+ +H IIR NAL++ Y+K
Sbjct: 8 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67
Query: 326 -------VGGVEIAQKI-------------------VEQSG-ISYLNVIAFTTLLDGYIK 358
+GG+ ++I ++Q+G ++ ++ I + ++ Y K
Sbjct: 68 RFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQ--VNTYKK 125
Query: 359 IGD-----------------IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
+ D +G R++F+ + RD+V+W ++ G QNG+++DA+ + R
Sbjct: 126 VFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVR 185
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M +P+++TLS++L + + +L GK+IH A+R+G + + + ++LI MY+K
Sbjct: 186 EMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCT 245
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
++ + RVF ++ + + +SW S+I Q+G+ +E ++ F++ML IKP+H+++ ++
Sbjct: 246 RVDDSCRVFYMLP-QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 304
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC H + G++ + + + +++VD+ + G ++ A + M L D
Sbjct: 305 PACAHLTTLHLGKQLHGYIIR-SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY-D 362
Query: 582 VVAWGSLLSACRVH 595
+V+W +++ +H
Sbjct: 363 MVSWTAMIMGYALH 376
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 176/377 (46%), Gaps = 46/377 (12%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +L S L +A + N GK +H I+ G VF+ +SL++ YAK
Sbjct: 194 PDSFTLSSVLPIFAEYV-------NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAK--- 243
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
C+ R+D +C VF ++P D +SW +II +
Sbjct: 244 ----------------CT------------RVDDSCRVFYMLPQHDGISWNSIIAGCVQN 275
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G F ++ F +M+ ++ P + +S++ +C L L GK++H +++++ G V +
Sbjct: 276 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA 335
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IE 239
++L++MYAK G+ A+ +FD M L ++ SW ++ + G A + F +M ++
Sbjct: 336 SALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVK 395
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
+ V + +++ S G EA F +M +D + P A+ + +L ++
Sbjct: 396 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL---EE 452
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIK 358
+ +I + TG V + L++ +E+A+K+ ++ + N+ A+ L + Y
Sbjct: 453 AYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSA 512
Query: 359 IGDIGPARRIFDSLRDR 375
G AR++ ++RD+
Sbjct: 513 AGRWKDARKLRIAMRDK 529
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/592 (38%), Positives = 343/592 (57%), Gaps = 30/592 (5%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
S LD A F DV N++I G ++ ++L F M ++S PD F+ A
Sbjct: 52 SDSLDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAF 111
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV----EQS 339
+ A ANL +++G Q+H + D VG LIS Y + G V A+K+ E +
Sbjct: 112 IVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPN 171
Query: 340 GISY-------------------------LNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
I++ N++++ +L GY K G++ AR +F +
Sbjct: 172 AIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPM 231
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+D V+W+ M+VG+ NG ++A FR + R+G +PN +L+ +LS + +L+ GK +
Sbjct: 232 KDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKIL 291
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +SG A +SV+NAL+ YSK GN+ A+ VF I + VSWTSM+ ALA HG
Sbjct: 292 HGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGH 351
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
GEEAI +F +M E GI+PD I ++ +L AC+H GLVEQG Y++ MK ++ I+P+ H+
Sbjct: 352 GEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYG 411
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDL GRAG LQ+AY F+ MP+ + W +LL AC +H ++ L + E+L ++P+
Sbjct: 412 CMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPN 471
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
NS + L N Y+ GKW+DAA++R+SM + KT G+S +++ ++ F +
Sbjct: 472 NSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKI 531
Query: 675 RDAIYNKMAKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ Y K+ +I ++ E G+VP+ VLHD+EE+ KE + HSEKLA+AFG+ +
Sbjct: 532 TEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKG 591
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+RI+KNLR+C DCH+ +K I ++ EIVVRD +RFH FK G CSCRDYW
Sbjct: 592 RTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 212/441 (48%), Gaps = 79/441 (17%)
Query: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
+PP S +A ++++ R+ VG +H + + GL +F+ +L++ Y + +
Sbjct: 102 SPPDSFS----FAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFV 157
Query: 65 SYAKKVFDEMP-------------------------------VKTLCSWNTILSAYAKQG 93
+A+KVFDEMP V+ L SWN +L+ Y K G
Sbjct: 158 GFARKVFDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAG 217
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
L+LA E+F MP +D VSW+T+IV + G F+ A F E+ + + P + ++T VL+
Sbjct: 218 ELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLS 277
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+C G L GK +H F+ K+GL+ V+V N+LL+ Y+K G+ +MA+ VF+ R+ N
Sbjct: 278 ACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFE--RIMN--- 332
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
ER++V+W SM+A + +G+ EA+G+F M ++S
Sbjct: 333 -------------------------ERNIVSWTSMMAALAMHGHGEEAIGIFHKM-EESG 366
Query: 274 LKPDKFTLASTLSACANLEKLKLG-----KQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
++PD+ S L AC++ ++ G K Y I + G ++ Y + G
Sbjct: 367 IRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYG----CMVDLYGRAGQ 422
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV--- 385
++ A + V Q I +I + TLL GD+ A ++ + L + D + ++
Sbjct: 423 LQKAYEFVCQMPIPCTAII-WRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSN 481
Query: 386 GYEQNGLNKDAVELFRSMVRE 406
Y G KDA + RSM +
Sbjct: 482 AYAVAGKWKDAASVRRSMTEQ 502
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 222/510 (43%), Gaps = 97/510 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +HA ++K GL F+ L++ A + S S
Sbjct: 22 KQIHANVLKLGLESDPFIAGKLLHHCAISLSDS--------------------------- 54
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ-FTVTSV 151
LD AC +F PN D T+I E R ++++ F+EM ++ P F+ +
Sbjct: 55 --LDYACRLFRYTPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFI 112
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG---------DEMM---- 198
+ + L + G ++H + GL + V +L++MY + G DEM
Sbjct: 113 VKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNA 172
Query: 199 ------------------AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+ +FD M ++N+ SWNV+++ + +G L+LAR F +M +
Sbjct: 173 IAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMK 232
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
D V+W++MI G++ NGY EA F L+ ++P++ +L LSACA L+ GK +
Sbjct: 233 DDVSWSTMIVGFAHNGYFEEAFSFFRE-LQRKGMRPNETSLTGVLSACAQAGALEFGKIL 291
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H +I ++ V NAL+ Y+K G V +AQ + E
Sbjct: 292 HGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFE----------------------- 328
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
RI + +R++V+WT+M+ +G ++A+ +F M G +P+ ++L
Sbjct: 329 ------RI---MNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLY 379
Query: 421 VSSSLASLDHGKQI--HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
S ++ G + + + E S+ ++ +Y +AG + A +
Sbjct: 380 ACSHAGLVEQGCEYFDKMKGMYNIE-PSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCT 438
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ W +++ A + HG + A Q+ ER+ EL
Sbjct: 439 AIIWRTLLGACSMHGDVKLAEQVKERLSEL 468
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/705 (33%), Positives = 378/705 (53%), Gaps = 73/705 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y K G L+ A VF P ++ SWT +I + GR + A+ +F EM++ +
Sbjct: 73 NHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQ 132
Query: 143 PTQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P + T+ + +C+A + L AG+ +H+ + + G V T SL++MY+K G
Sbjct: 133 PHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGS------ 186
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
L+ + F+ M E + V+WN+MIA ++++ EA
Sbjct: 187 -------------------------LEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEA 221
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L M + ++ T + +SA +LK + IH I+RT FD
Sbjct: 222 LRTLQKMFLEG-IRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFD----------- 269
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Q +V NVI L+ Y K G + A +F S+ DV+AW
Sbjct: 270 -----------QDVV--------NVI-----LNMYGKCGCLQDAEAMFKSMSQPDVIAWN 305
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALR 440
M+ Y Q+G +A+ + M EG P++YT +++ ++L ++ GKQ+H R
Sbjct: 306 TMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDR 365
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
+ + + L+ N+L+ MY K G ++ AR +F+ + +V+W +MI A AQH ++A +
Sbjct: 366 AFQVTELA--NSLVNMYGKCGILDVARSIFD--KTAKGSVTWNAMIGAYAQHSHEQQAFE 421
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LF M G +P +IT++ VL+AC + GL E+ Y+ M+ H ++P H+ MV+ L
Sbjct: 422 LFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESL 481
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
G+AG L +A I+ MP EPDV+ W S L+ CR H ++ GK AA+ + I+P+ S Y
Sbjct: 482 GKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYV 541
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
AL +++ G +++A+ IRK M G++K G S +++ V+ F D +P+ I++
Sbjct: 542 ALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFD 601
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
++ ++ E+K G+ PD V HDVE KE +L HSE+LAIAFG+IST + T LRIMK
Sbjct: 602 ELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMK 661
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCH+ K K+ REI+VRD+ RFHHFK G CSC+D+W
Sbjct: 662 NLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/699 (35%), Positives = 381/699 (54%), Gaps = 68/699 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK G ++ A +VF+ M D +SW +I + E + + +F+ M++D+V
Sbjct: 234 NALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVE 293
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+TSV + L DL K++H+ VK G + V NSL+ MY+ +G
Sbjct: 294 PNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLG-------- 345
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
R+ A F +M RD ++W +MI+GY +NG+ +AL
Sbjct: 346 -----------------------RMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKAL 382
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++A +++ +++ PD T+AS L+ACA+L +L +G ++H F V NAL+
Sbjct: 383 EVYA-LMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEM 441
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK KI+E+ A +F + D+DV++W++
Sbjct: 442 YAK-------SKIIEK--------------------------AIEVFKYMPDKDVISWSS 468
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ G+ N N +A+ FR M+ + KPN+ T A L+ ++ SL GK+IHA LR G
Sbjct: 469 MIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQG 527
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
AS V NAL+ +Y K G A F H ++ VSW M+ HG G+ A+ F
Sbjct: 528 IASEGYVPNALLDLYVKCGQTGYAWAQFG-AHGTKDVVSWNIMLAGFVAHGHGDIALSFF 586
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
MLE G PD +T+V +L C+ G+V QG ++ M + I P H+A MVDLL R
Sbjct: 587 NEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSR 646
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
G L E YNFI MP+ PD WG+LL+ CR+H+N++LG++AA+ +L +EP+++G + L
Sbjct: 647 VGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLL 706
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
+LY+ G W + + +RK+M+ G++ G SWV+++ +H F +D HPQ I + +
Sbjct: 707 SDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVL 766
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
I++ +K GF P + L D +E K+ +L HSE+LA+AFGLI+T T++ + KN
Sbjct: 767 DGIYERMKASGFAPVESYSLED-KEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQ 825
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
C CH ++ I K+V REI VRD FHHF+ G CSC
Sbjct: 826 YTCESCHGILRMISKIVRREITVRDTKEFHHFRDGSCSC 864
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA +++ G+ ++ N+L++ Y K YA F K + SWN +L+ +
Sbjct: 516 GKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVA 575
Query: 92 QGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQF 146
G D+A FN M + D V++ ++ + G +F M + ++P
Sbjct: 576 HGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLK 635
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
++ + +G L+ G ++F+ + ++ V +LLN
Sbjct: 636 HYACMVDLLSRVGRLTEG---YNFINRMPITPDAAVWGALLN 674
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/610 (37%), Positives = 355/610 (58%), Gaps = 48/610 (7%)
Query: 176 LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFD 235
++ C +++N ++A+V ++ + F G +L V+ +N + G + A FD
Sbjct: 49 VNSCPSISNCR-EIHARVFKSLLYRDGFIGDQL--VTCYNKL-------GYAEDALKLFD 98
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
M +D+V+WNS+I+G+S+ + +L F M + S+KP++ T+ S +SAC L
Sbjct: 99 DMPHKDLVSWNSLISGFSRCLH--MSLTAFYTMKFEMSVKPNEVTILSMISACNG--ALD 154
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
GK IH + I KVGG L V +L++
Sbjct: 155 AGKYIHGFGI-------------------KVGGT--------------LEVKVANSLINM 181
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y K GD+ A R+F+++ D + V+W +++ NG ++ ++ F M R G + + T+
Sbjct: 182 YGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTI 241
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
A+L L + IH +G + ++++ AL+ Y+K G ++A+ VF + +
Sbjct: 242 LALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGF 301
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ V+WT+M+ A HGLG EAI+LFE M G++PDH+T+ +L+AC+H GLV +G+
Sbjct: 302 -ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKS 360
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
Y+N+M V+ I+P H++ MVDLLGR GLL +AY I+NMP+EP+ WG+LL ACRVH
Sbjct: 361 YFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVH 420
Query: 596 KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
N++LGK AE L+ +EP + Y L N+YS+ W+DAA +R +K G+K+T G+S
Sbjct: 421 GNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSS 480
Query: 656 VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR 715
++ NK H F V D HP+ + IY+K+ ++ +I++ G+ T VL DVEE+VKE M+
Sbjct: 481 IEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMIN 540
Query: 716 HHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFK 775
HSEKLAIAFGL+ + E L I KNLR+C DCHS K I + R I++RD RFHHF
Sbjct: 541 KHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFS 600
Query: 776 KGLCSCRDYW 785
G CSC DYW
Sbjct: 601 DGFCSCADYW 610
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 201/470 (42%), Gaps = 103/470 (21%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HAR+ K L+ F+ + L+ Y K A K+FD+MP K L SWN+++S +++
Sbjct: 61 IHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC-- 118
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L ++ F M +F+ +++ P + T+ S++++
Sbjct: 119 LHMSLTAFYTM-------------------KFEMSVK-----------PNEVTILSMISA 148
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C G L AGK +H F +K G + V V NSL+NMY K GD A +F+ + N SW
Sbjct: 149 CN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSW 206
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
NS+IA NG E + F N ++ +
Sbjct: 207 -------------------------------NSIIAAQVTNGCAREGIDYF-NKMRRLGI 234
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+ D+ T+ + L AC +L KL + IH + T F A + AL+ YAK+G + +
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYG 294
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ + G + + +A+T +L G Y +GL +
Sbjct: 295 VFTEVG--FADRVAWTAMLAG-------------------------------YAAHGLGR 321
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNAL 453
+A++LF SM +G +P++ T + +LS S ++ GK + + G + + +
Sbjct: 322 EAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCM 381
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
+ + + G +N A V + W +++ A HG LG+E +
Sbjct: 382 VDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAE 431
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 63/267 (23%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H IK G L V + NSL+N Y K+ ++ A ++F+ +P SWN+I++A
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + FN M R+ +E QD+ T+ ++
Sbjct: 216 NGCAREGIDYFNKMR------------------------RLGIE--QDEG-----TILAL 244
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C LG + +H + TG + + +LL+ YAK+
Sbjct: 245 LQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKL------------------ 286
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
GRL + F ++ D V W +M+AGY+ +G EA+ +F +M +
Sbjct: 287 -------------GRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESM-AN 332
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGK 298
L+PD T LSAC++ + GK
Sbjct: 333 KGLEPDHVTFTHLLSACSHSGLVNEGK 359
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 31 VGKL---VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
VGKL +H + G + + +L++ YAK +S + VF E+ +W +L+
Sbjct: 253 VGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLA 312
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
YA G +GR AI++F M + P T
Sbjct: 313 GYAAHG-----------------------------LGR--EAIKLFESMANKGLEPDHVT 341
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +L++C+ G ++ GK + + + G+ V+ + ++++ + G A V M
Sbjct: 342 FTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNM 401
Query: 207 RLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
++ N W ++ G ++L + + +I
Sbjct: 402 PMEPNAGVWGALLGACRVHGNIELGKEVAEHLI 434
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/600 (38%), Positives = 354/600 (59%), Gaps = 36/600 (6%)
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MY+K+GD A AV+ MR KN S N++++ ++ +G L AR FD+M +R + TWN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
+MIAG Q ++ E L +F M PD++TL S S A L + +G+QIH Y I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
G+E L+++ ++L Y++ G +
Sbjct: 120 Y--------------------GLE-------------LDLVVNSSLAHMYMRNGKLQDGE 146
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA 426
+ S+ R++VAW +++G QNG + + L++ M G +PN T +LS S LA
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
G+QIHA A++ G +S ++V ++LI+MYSK G + A + F+ ++ V W+SMI
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMI 265
Query: 487 VALAQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
A HG G+EAI+LF M E ++ + + ++ +L AC+H GL ++G ++MM +
Sbjct: 266 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
KP H+ +VDLLGRAG L +A I +MP++ D+V W +LLSAC +HKN ++ +
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
+++L I+P++S Y L N+++S +W D + +RKSM+ VKK G SW + + +VH F
Sbjct: 386 KEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQF 445
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
+ D + IY+ + ++ E+K G+ PDTASVLHD++E+ KE L HSEKLA+AF
Sbjct: 446 KMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAF 505
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+ PE +RI+KNLRVC+DCH A K+I + +REI +RD +RFHHF G CSC DYW
Sbjct: 506 ALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 199/467 (42%), Gaps = 70/467 (14%)
Query: 55 MNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
M+ Y+K A V+ M K S N +++ Y + G L A +VF+ MP+R +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I + + + +F EM P ++T+ SV + L +S G+++H + +K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
GL + V +SL +MY + G + V M ++N
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN------------------------ 156
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
+V WN++I G +QNG L ++ M+K S +P+K T + LS+C++L
Sbjct: 157 -------LVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 295 KLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLD 354
G+QIHA I+ + V ++LIS Y+K G
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC-------------------------- 242
Query: 355 GYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNY 413
+G A + F D D V W++M+ Y +G +A+ELF +M + + N
Sbjct: 243 -------LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 414 TLSAMLSVSSSLASLDHGKQIHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
+L S D G ++ + + G L ++ + +AG ++ A +
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 355
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP-DHITYV 518
+ + + V W +++ A H E A ++F+ +L+ I P D YV
Sbjct: 356 MPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYV 400
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 62/264 (23%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ +G+ +H IK GL L + + +SL + Y + + + V MPV+ L +WNT++
Sbjct: 105 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
A+ G + ++ +M +S P +
Sbjct: 165 MGNAQNGCPETVLYLYKMM----KISGCR---------------------------PNKI 193
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +VL+SC+ L G+++H+ +K G S V V +SL++MY+K
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC------------- 240
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
G L A F + + D V W+SMI+ Y +G EA+ +F
Sbjct: 241 ------------------GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 282
Query: 267 NMLKDSSLKPDKFTLASTLSACAN 290
M + ++++ ++ + L AC++
Sbjct: 283 TMAEQTNMEINEVAFLNLLYACSH 306
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA IK G V + +SL++ Y+K + A K F E + W++++SAY
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 92 QGRLDLACEVFNLMPNR-----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G+ D A E+FN M + + V++ ++ + G + +F MV+
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 322
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/763 (33%), Positives = 398/763 (52%), Gaps = 114/763 (14%)
Query: 34 LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
++H +I + GL S +L N L+ AK S+ A+ +FD + K + SWN I+SAYA +G
Sbjct: 62 IIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRG 121
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
P+ A+ +F +M V PT T + L+
Sbjct: 122 H-----------PS--------------------TALHLFAKM---DVPPTAMTFATALS 147
Query: 154 SCTALGDLSAGKKVHSFV-VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C++LGDL G+++H+ + G+ V + ++ +MYAK GD AK+VFD + KNV
Sbjct: 148 ACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVV 207
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEALGMFANMLKD 271
SWN ++IA Y+Q+G+ +AL +F M +
Sbjct: 208 SWN-------------------------------ALIAAYAQSGHSHHQALDLFEKM-AE 235
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT--EFDATG-PVGNALISCYAKVGG 328
++P + T L AC ++ L ++IHA I+ T +FD V NAL++ YAK G
Sbjct: 236 HGVRPCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKCGS 292
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
+E+ AR IF ++ RD V+ M+ +
Sbjct: 293 LEV---------------------------------ARDIFRKMQRRDQVSMNVMIATFA 319
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-----RSGE 443
Q GL K+++++FR M EG ++ T +++++ S +L+ GK+IH + R
Sbjct: 320 QQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCC 379
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
++ V AL++MY K G + A+ VF + + +VSW +M+ A A G G+EA
Sbjct: 380 LPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKN-SVSWNAMLAACAHQGQGDEAAAFLR 438
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
G++ D +++ VL AC+H G++E ++ +M + + P ++ MVDLL R+
Sbjct: 439 AAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARS 498
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L +A + +MP PD +AW +LL CRV +L+ AAE+ +EP N+ Y+ L
Sbjct: 499 GRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLS 558
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKK-TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
+LYS+ GK ++ +R SMK G++K G S +++ +VH F D HPQ D I ++
Sbjct: 559 SLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILREL 618
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
+ E+K+ GFVP T V+HD++ + KE++L HSEKLA+AFGLIST L ++KNL
Sbjct: 619 DILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNL 678
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC+DCH AIK I KL R I VRDA RFH F+ G CSC DYW
Sbjct: 679 RVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 343/573 (59%), Gaps = 35/573 (6%)
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SWN+++ ++ +G L+ AR FD+M R+V TWN+M+AG + +G + E+LG F M ++
Sbjct: 2 SWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREG 61
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
++PD++ L S CA L + G+Q+HAY++R+ D VG++L Y + G
Sbjct: 62 -MQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG----- 115
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
+++ G+ A R SL ++V+ + G QNG
Sbjct: 116 -----------------------FLRDGE--AALRALPSL---NIVSCNTTISGRTQNGD 147
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+ A+E F M G + N T + ++ S LA+L G+QIHA A+++G + V +
Sbjct: 148 AEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTS 207
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
L+ MYS+ G + + RV L + + V ++MI A HG G++A+ LF++M+ G +P
Sbjct: 208 LVHMYSRCGCLGDSERVC-LEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEP 266
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNF 572
+ +T++ +L AC+H GL ++G + +M + ++P+ H+ +VDLLGR+G L EA +
Sbjct: 267 NEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDL 326
Query: 573 IENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKW 632
I +MP++PD V W +LLSAC+ K D+ + AE+++ ++P +S +Y L N+ ++ +W
Sbjct: 327 ILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRW 386
Query: 633 EDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEM 692
ED + +R++M+ V+K G SWV+++ ++H F D H ++ I + ++ I++
Sbjct: 387 EDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQC 446
Query: 693 GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAI 752
G+ PD + V HD+E++ KE L HHSEKLAIAF +S PE +R+MKNLRVC+DCH AI
Sbjct: 447 GYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAI 506
Query: 753 KFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + K++ REIVVRD +RFHHFK G CSC DYW
Sbjct: 507 KLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 195/439 (44%), Gaps = 67/439 (15%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
SWN ++ Y K G L+ A ++F+ MP R+ +W ++ G + ++ F M ++
Sbjct: 2 SWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREG 61
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+ P ++ + S+ C L D+ +G++VH++VV++GL + V +SL +MY + G +
Sbjct: 62 MQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGE 121
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
A L+ + S N +V+ N+ I+G +QNG D E
Sbjct: 122 AA-----LRALPSLN--------------------------IVSCNTTISGRTQNG-DAE 149
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
F +++ + ++ + T S +++C++L L G+QIHA I+T D PV +L+
Sbjct: 150 GALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLV 209
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
Y++ G +G + R+ D+V
Sbjct: 210 HMYSRCGC---------------------------------LGDSERVCLEYSGTDLVLC 236
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+AM+ Y +G + AV LF+ M+ G +PN T +L S D G +
Sbjct: 237 SAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK 296
Query: 441 S-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+ G S+ ++ + ++G +N A + + + + V W +++ A + A
Sbjct: 297 TYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAE 356
Query: 500 QLFERMLELGIKPDHITYV 518
++ ER++EL D +YV
Sbjct: 357 RIAERVIELD-PHDSASYV 374
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 41/257 (15%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ G+ VHA +++ GL + + +SL + Y + + + +P + S NT +
Sbjct: 80 RDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTI 139
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
S + G + A E F LM G NA+
Sbjct: 140 SGRTQNGDAEGALEFFCLMRG---------------AGVEANAV---------------- 168
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK---VGDEMMAKAVF 203
T S + SC+ L L+ G+++H+ +KTG+ V V SL++MY++ +GD +
Sbjct: 169 TFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEY 228
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYDF 259
G L S+ H H + A F QM+ E + VT+ +++ S +G
Sbjct: 229 SGTDLVLCSAMISAYGFHGHGQK---AVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKD 285
Query: 260 EALGMFANMLKDSSLKP 276
E + F M K L+P
Sbjct: 286 EGMNCFELMTKTYGLQP 302
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/639 (36%), Positives = 365/639 (57%), Gaps = 42/639 (6%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
FL N+L++ YA+ + A++VFDE+P S+N +LSA+A+ GR A +F+ +P+
Sbjct: 795 TFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPD 854
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
D S+ +I + R +A+ M D + ++ S L++C A D G +V
Sbjct: 855 PDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQV 914
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H+ V K+ + V + ++LL+MYAK W
Sbjct: 915 HALVSKSPHAKDVYIGSALLDMYAKC-------------------EWP------------ 943
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+ AR F+ M ER++V+WNS+I Y QNG EAL +F +M+K + PD+ TLAS +SA
Sbjct: 944 EEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMK-AGFVPDEVTLASVMSA 1002
Query: 288 CANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
CA L + G+Q+HA +++++ F + NAL+ YAK G A+ + ++ ++ +V
Sbjct: 1003 CAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDR--MASRSV 1060
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
++ T+L+ GY + ++ A+ +F + +++V+AW ++ Y QNG ++A+ LF + RE
Sbjct: 1061 VSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRE 1120
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG------EASSLSVSNALITMYSKA 460
P +YT +L+ ++A L G+Q H L+ G S + V N+L+ MY K
Sbjct: 1121 SVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKT 1180
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G+I+ +VF + R + VSW +MIV AQ+G ++A+ LFERML PD +T +GV
Sbjct: 1181 GSIDDGAKVFERMAAR-DNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGV 1239
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L+AC H GLVE+G+RY+ M H I P+ H+ M+DLLGRAG L+E I+ M +EP
Sbjct: 1240 LSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEP 1299
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
D V W SLL +CR+HKN+++G+ AA KL ++P NSG Y L N+Y+ GKW D +R
Sbjct: 1300 DAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRS 1359
Query: 641 SMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
SMK+ GV K G SW++I KV VF D HP ++ I+
Sbjct: 1360 SMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIH 1398
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 282/575 (49%), Gaps = 66/575 (11%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
+ +H I K +V L +L++ Y ++ A++ FD++
Sbjct: 170 ARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDI----------------- 212
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
L PN ++SW I+ Y+ G A+ MF M+ V P +TV+
Sbjct: 213 ------------LEPN--AISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHA 258
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C L G+ +H+FV++ G V+V +S+++MYAK G A+++F+ +K++
Sbjct: 259 VLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDM 318
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+VS GR+ A+ F+ M ER++V+WN+M+ GY ++ AL +F M ++
Sbjct: 319 VMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQE 378
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ + D TL S LSAC + + G+++HA+ I+ F ++ + NAL+ Y+K G +
Sbjct: 379 TR-EFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRS 437
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A++++ +F+ +RD +W +++ GYE++
Sbjct: 438 AERLL-------------------------------LFEMGSERDSYSWNSLISGYERHS 466
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+++ A+ M E PN T S+ L+ +++ L G QIHA +R G + +
Sbjct: 467 MSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRS 525
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI MY K + + R+F R + + W SMI A G GE + LF+ M + GIK
Sbjct: 526 VLIDMYCKCRQFDYSIRIFEARPSR-DVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIK 584
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
D +T++G L +C G V G+ Y+ +M + I P H+ M++LLG+ G + E +
Sbjct: 585 ADSVTFLGALVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYECMIELLGKHGCMVELED 643
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
F+E+MP EP W + CR + N LG+ AA+
Sbjct: 644 FVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAK 678
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 254/513 (49%), Gaps = 40/513 (7%)
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+N + + A G + A E+F+LMP RD SW II + G A+ +F M +
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P T+ SVL+ C DL +++H + K V + +L+++Y
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYG---------- 197
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
N + L AR FD ++E + ++WN ++ Y G A
Sbjct: 198 -------------NCFL--------LADARRAFDDILEPNAISWNVIVRRYHLAGMGDMA 236
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ MF ML + ++P +T++ + AC + L+ G+ IHA+++R ++ V ++++
Sbjct: 237 VDMFFRMLS-AGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVD 295
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YAK G ++ AQ + + + +++ T+++ G G I A+R+F+ +++R++V+W
Sbjct: 296 MYAKCGAMDAAQSLFNLAPMK--DMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWN 353
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AML GY ++ A+ LF+ M +E + + TL ++LS + + + G+++HA A++
Sbjct: 354 AMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKC 413
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNL-IHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G SS + NAL+ MYSK G + +A R+ + +++ SW S+I +H + E A+
Sbjct: 414 GFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALY 473
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVDL 559
+M + + P+ T+ L AC + L++QG Q + M++ ++I + ++D+
Sbjct: 474 ALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR--SVLIDM 530
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
+ + E P DV+ W S++ C
Sbjct: 531 YCKCRQFDYSIRIFEARP-SRDVILWNSMIFGC 562
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 191/437 (43%), Gaps = 81/437 (18%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + AR FD M RD +WN++I S+ G+ EAL +F+NM ++P T+AS
Sbjct: 99 GSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNM-NSLGIRPKDATMASV 157
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
LS CA L +Q+H +I + +F +
Sbjct: 158 LSCCAECLDLCGARQLHGHIAKRDFQS--------------------------------- 184
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
NVI T L+D Y + ARR FD + + + ++W ++ Y G+ AV++F M+
Sbjct: 185 NVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRML 244
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
G +P YT+S + +L+ G+ IHA LR G + V ++++ MY+K G ++
Sbjct: 245 SAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMD 304
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI-------------- 510
AA+ +FNL + +S TS++ LA G +A ++FE M E +
Sbjct: 305 AAQSLFNLAPMKDMVMS-TSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSM 363
Query: 511 -----------------KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF 553
+ D IT VL+ACT G+++ G+ + VH F
Sbjct: 364 DLTGALLLFQQMRQETREFDAITLGSVLSACT--GILDIGKG-----EEVHAFAIKCGFF 416
Query: 554 AS------MVDLLGRAGLLQEAYNFIE-NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+S +V + + G L+ A + M E D +W SL+S H + A
Sbjct: 417 SSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALT 476
Query: 607 KLLL-IEPDNSGAYSAL 622
K+ + P+ S SAL
Sbjct: 477 KMQSEVTPNQSTFSSAL 493
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
TPN + S L A++ LK G +HA +I+ G + L++ L++ Y K
Sbjct: 483 TPNQSTFSSALAACANIFL--LKQ-----GMQIHAYMIRKGYEIDDILRSVLIDMYCKCR 535
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIV 118
Y+ ++F+ P + + WN+++ A G+ + ++F+ M + DSV++ +V
Sbjct: 536 QFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALV 595
Query: 119 TYNEIGRFKNAIRMFVEMVQDQVLP 143
+ G + F M+ + ++P
Sbjct: 596 SCISEGHVRLGRSYFTLMMDESIIP 620
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 338/559 (60%), Gaps = 8/559 (1%)
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R F Q+ + W ++I Y+ G +AL +++M K + P FT ++ SACA
Sbjct: 63 RLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRK-RRVSPISFTFSALFSACAA 121
Query: 291 LEKLKLGKQIHAY-IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ LG Q+HA ++ F + V NA+I Y K G + A+ + ++ + +VI++
Sbjct: 122 VRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDE--MPERDVISW 179
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T L+ Y +IGD+ AR +FD L +D+V WTAM+ GY QN + DA+E+FR + EG +
Sbjct: 180 TGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVE 239
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSG--EASSLSVSNALITMYSKAGNINAAR 467
+ TL ++S + L + + I A SG ++ V +ALI MYSK GN+ A
Sbjct: 240 IDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAY 299
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
VF + R S++SMIV A HG AI+LF MLE G+KP+H+T+VGVLTAC+H
Sbjct: 300 DVFKGMRERN-VFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHA 358
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV+QGQ+ + M+ + + PT +A M DLL RAG L++A +E MP+E D WG+
Sbjct: 359 GLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGA 418
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LL A VH N D+ +IA+++L +EPDN G Y L N Y+S G+W+D + +RK ++ +
Sbjct: 419 LLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNL 478
Query: 648 KKTQGFSWVQIQNK-VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
KK G+SWV+ +N +H F D HP+ + I ++ + + +K +G+ P+ +S+ + +
Sbjct: 479 KKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGIN 538
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
+ K +L HSEKLA+AFGL+ST +T++IMKNLR+C DCH + K+ R+IVVR
Sbjct: 539 DREKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVR 598
Query: 767 DATRFHHFKKGLCSCRDYW 785
D TRFHHF G CSC ++W
Sbjct: 599 DNTRFHHFLNGACSCSNFW 617
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 231/475 (48%), Gaps = 63/475 (13%)
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACE----------VFNLMPNRD 109
+ S++ AK+V ++ +K L + +L+ K RL A +F+ + +
Sbjct: 17 RCSSLNQAKEVHAQIYIKNLQQSSYVLT---KLLRLVTALPHVPLHSYPRLLFSQLHTPN 73
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
+WT +I Y G A+ + M + +V P FT +++ ++C A+ + G ++H+
Sbjct: 74 PFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHA 133
Query: 170 -FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
++ G S + V N++++MY K G A+ VFD M ++V SW ++ + G +
Sbjct: 134 QTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMR 193
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AR FD + +D+VTW +M+ GY+QN +AL +F L+D ++ D+ TL +SAC
Sbjct: 194 AARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVF-RRLRDEGVEIDEVTLVGVISAC 252
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATG-------PVGNALISCYAKVGGVEIAQKIVEQSGI 341
A +LG +A IR +++G VG+ALI Y+K G VE
Sbjct: 253 A-----QLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVE----------- 296
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
A +F +R+R+V ++++M+VG+ +G + A++LF
Sbjct: 297 ----------------------EAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFY 334
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKA 460
M+ G KPN+ T +L+ S +D G+Q+ AS + G A + + + + S+A
Sbjct: 335 DMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRA 394
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
G + A ++ + + W +++ A HG + A +R+ EL +PD+I
Sbjct: 395 GYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFEL--EPDNI 447
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 165/333 (49%), Gaps = 37/333 (11%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHAR-IIKCGLHLSVFLKNSLMNFYAKTESISYA 67
+SP+ F ++ L + R+ +G +HA+ ++ G +++ N++++ Y K S+ A
Sbjct: 105 VSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCA 164
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+ VFDEMP + + SW ++ AY + G + A ++F+ +P +D V+WT ++ Y +
Sbjct: 165 RMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPM 224
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT--NS 185
+A+ +F + + V + T+ V+++C LG + +G NV ++
Sbjct: 225 DALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSA 284
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MY+K G+ A VF GMR ER+V ++
Sbjct: 285 LIDMYSKCGNVEEAYDVFKGMR-------------------------------ERNVFSY 313
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
+SMI G++ +G A+ +F +ML ++ +KP+ T L+AC++ + G+Q+ A +
Sbjct: 314 SSMIVGFAIHGRARAAIKLFYDML-ETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASME 372
Query: 306 RTEFDA-TGPVGNALISCYAKVGGVEIAQKIVE 337
+ A T + + ++ G +E A ++VE
Sbjct: 373 KCYGVAPTAELYACMTDLLSRAGYLEKALQLVE 405
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 334/559 (59%), Gaps = 36/559 (6%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML-KDSSLKPDKFTLASTLSAC 288
AR FD++ + + V +M +GY +N + +L +F M+ DS+ D+ SA
Sbjct: 3 ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
A + + +HA I + F+ V N ++ YAK G
Sbjct: 63 ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGS-------------------- 102
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM--VRE 406
D+ AR++FD++ +RDVV+W +M+ Y QNG++ +A+ L+ M V
Sbjct: 103 -----------RDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGG 150
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G K N LSA+L + ++ GK IH +R G ++ V +++ MYSK G + A
Sbjct: 151 GIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMA 210
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
R F I + +SW++MI HG G+EA+++F M G++P++IT++ VL AC+H
Sbjct: 211 SRAFRKIK-EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSH 269
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
GL+++G+ +YN MK I+ H+ MVDLLGRAG L EAY+ I+ M ++PD WG
Sbjct: 270 AGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWG 329
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LLSACR+HKN++L +++ ++L ++ NSG Y L N+Y+ G W+D IR +K
Sbjct: 330 ALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRR 389
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
++K G+S +++ K+++F V D HPQ IY+ + K+ + ++E G+VP+T SVLHD++
Sbjct: 390 IEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLD 449
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E+ KE LR HSEKLA+AF L+++ + + I+KNLRVC+DCH+A+KFI K+ +REI++R
Sbjct: 450 EEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIR 509
Query: 767 DATRFHHFKKGLCSCRDYW 785
D RFHHFK GLCSCRDYW
Sbjct: 510 DLQRFHHFKDGLCSCRDYW 528
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 188/444 (42%), Gaps = 94/444 (21%)
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
A++ FDE+P + S Y + + + E+F M DS S
Sbjct: 3 ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSAS-------------- 48
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+V + F+ ++ + D +H+ + K G V N++
Sbjct: 49 ---------VVDEAAALVAFSASARVP------DRGVTASLHALIAKIGFERNAGVVNTM 93
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
L+ YAK G S L++AR FD M ERDVV+WN
Sbjct: 94 LDSYAKGG-----------------------------SRDLEVARKVFDTM-ERDVVSWN 123
Query: 247 SMIAGYSQNGYDFEALGMFANMLK-DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
SMIA Y+QNG EA+G+++ ML +K + L++ L ACA+ ++ GK IH ++
Sbjct: 124 SMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVV 183
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R + VG +++ Y+K G VE+A
Sbjct: 184 RMGLEENVYVGTSIVDMYSKCGRVEMAS-------------------------------- 211
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
R F ++++++++W+AM+ GY +G ++A+E+F M R G +PN T ++L+ S
Sbjct: 212 -RAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHA 270
Query: 426 ASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
LD G+ +A G + + ++ + +AG ++ A + + + + W +
Sbjct: 271 GLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGA 330
Query: 485 MIVALAQHGLGEEAIQLFERMLEL 508
++ A H E A +R+ EL
Sbjct: 331 LLSACRIHKNVELAEMSVKRLFEL 354
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 64/266 (24%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAK--TESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+HA I K G + + N++++ YAK + + A+KVFD M + + SWN++++ YA+
Sbjct: 74 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQN 132
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G A +++ M N V + +++VL
Sbjct: 133 GMSAEAIGLYSKMLN-----------------------------VGGGIKCNAVALSAVL 163
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C G + GK +H+ VV+ GL V V S+++MY+K G MA F ++ KN+
Sbjct: 164 LACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNIL 223
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SW ++MI GY +G EAL +F M K S
Sbjct: 224 SW-------------------------------SAMITGYGMHGRGQEALEIFTEM-KRS 251
Query: 273 SLKPDKFTLASTLSACANLEKLKLGK 298
L+P+ T S L+AC++ L G+
Sbjct: 252 GLRPNYITFISVLAACSHAGLLDEGR 277
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++++ GL +V++ S+++ Y+K
Sbjct: 175 GKHIHNQVVRMGLEENVYVGTSIVDMYSKC------------------------------ 204
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR+++A F + ++ +SW+ +I Y GR + A+ +F EM + + P T SV
Sbjct: 205 -GRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISV 263
Query: 152 LASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
LA+C+ G L G+ ++ + + G+ V ++++ + G A ++ M++K
Sbjct: 264 LAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKP 323
Query: 210 NVSSWNVVVS-LHIHSGRLDLARAQFDQMIERD 241
+ + W ++S IH ++LA ++ E D
Sbjct: 324 DAAIWGALLSACRIHKN-VELAEMSVKRLFELD 355
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/775 (32%), Positives = 399/775 (51%), Gaps = 99/775 (12%)
Query: 14 EFYAHLLQSNLKSRNPFVGKLVHARIIK-CGLHLSVFLKNSLMNFYAKTESISYAKKVFD 72
+ A +S + SR+P +G+ HAR ++ LS F+ L+N Y+K + + A
Sbjct: 16 QLLAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALA 75
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
P T+ S+ +S A+ GR A+
Sbjct: 76 SDPHPTVVSYTAFISGAAQH-------------------------------GRPLPALSA 104
Query: 133 FVEMVQDQVLPTQFTVTSVL-ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
F M++ + P FT S A+ +A + G ++HS ++ G Y
Sbjct: 105 FAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFG--------------YL 150
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
V D ++ A D ++ +GRL LAR F +M R+VV WN+++
Sbjct: 151 PV-DPFVSCAALD---------------MYFKTGRLKLARHLFGEMPNRNVVAWNAVMTN 194
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
+G E + + L+++ P+ + + +ACA L LG+Q H ++++ F+
Sbjct: 195 AVLDGRPLETIEAYFG-LREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFE- 252
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
++V +++D Y K G AR +FD
Sbjct: 253 --------------------------------MDVSVLNSMVDFYGKCRCAGKARAVFDG 280
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
+ R+ V+W +M+ Y QNG ++A + R G +P ++ +S+ L+ + L L G
Sbjct: 281 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLG 340
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+ +HA A+RS +++ V++AL+ MY K G + A ++F R V+W +MI A
Sbjct: 341 RALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRN-LVTWNAMIGGYAH 399
Query: 492 HGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
G + A+ +F+ M+ G P++IT V V+T+C+ GGL + G + M+ I+P
Sbjct: 400 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRT 459
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+A +VDLLGRAG+ ++AY I+ MP+ P + WG+LL AC++H +LG+IAAEKL
Sbjct: 460 EHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE 519
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
++P +SG + L N+++S G+W +A +IRK MK VG+KK G SWV +N VHVF +D
Sbjct: 520 LDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDT 579
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
H + I ++K+ +++ G++PDT L+D+EE+ KE + HSEKLA+AFGLI
Sbjct: 580 KHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICI 639
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
P +RIMKNLR+C DCH A KFI +V REI+VRD RFHHFK+ CSC DYW
Sbjct: 640 PPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 694
>gi|449458777|ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
gi|449503335|ref|XP_004161951.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Cucumis sativus]
Length = 629
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/694 (35%), Positives = 377/694 (54%), Gaps = 78/694 (11%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG--DLS 162
MP R+ VSWT +I +++ G +F M+ D P +FTV+S+L T+ G D
Sbjct: 1 MPRRNYVSWTVLITGFSQYGHVDECFLIFSRMLVDH-RPNEFTVSSLL---TSFGEHDGE 56
Query: 163 AGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHI 222
G+++H F +K L V V N+L+ MY+K+ E DG
Sbjct: 57 RGRQIHGFALKISLDAFVYVANALITMYSKICSE-------DGA---------------F 94
Query: 223 HSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLA 282
+ D A F M ++TWNSMIAG+ +A+ +F M + + D+ TL
Sbjct: 95 KDSKDDDAWTMFKSMENPSLITWNSMIAGFCFRKLGHQAIYLFMQMNRHG-IGFDRATLV 153
Query: 283 STLSACANLEKLKLGK------QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
STLS+ + + + G+ QIH ++T F + + AL+ YA++GG
Sbjct: 154 STLSSTSFCNRDEFGRRLSFCHQIHCQALKTAFISEVEIITALVKTYAELGG-------- 205
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF-DSLRDRDVVAWTAMLVGYEQNGLNKD 395
DI + R+F ++ +RD+V WT+++ + + K
Sbjct: 206 ------------------------DIADSYRLFVEAGYNRDIVLWTSIMAAFIDHDPGK- 240
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
+ LF +EG P+ +T S +L + + H H+ ++S ++NALI
Sbjct: 241 TLSLFCQFRQEGLTPDGHTFSIVLKACAGFLTEKHASTYHSLLIKSMSEDHTVLNNALIH 300
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
Y + G+I+++++VFN + + VSW +M+ A A HG E A+QLF +M + PD
Sbjct: 301 AYGRCGSISSSKKVFNQMK-HHDLVSWNTMMKAYALHGQAEIALQLFTKM---NVPPDAT 356
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T+V +L+AC+H GLVE+G +N + N + I H+A MVD+LGR+G +QEA++FI N
Sbjct: 357 TFVSLLSACSHAGLVEEGTSLFNSITN-YGIVCRLDHYACMVDILGRSGQVQEAHDFISN 415
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP+EPD V W S L +CR + L K+A+ KL ++P NS AY + NLY G + +A
Sbjct: 416 MPIEPDFVVWSSFLGSCRKYGATGLAKLASYKLKELDPSNSLAYVQMSNLYCFNGSFYEA 475
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
IR M VKK G S V+I+N+VH F HPQR+ I N++ K+ +KE+G+V
Sbjct: 476 DLIRMEMTGSRVKKEPGLSRVEIENQVHEFASGGRCHPQREVICNELEKLIGRLKEIGYV 535
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE----NTTLRIMKNLRVCNDCHSA 751
P+T+ LHDVE++ KEQ L HHSEKLA+ F +++ N +RIMKN+R+C DCH+
Sbjct: 536 PETSLALHDVEQEQKEQQLYHHSEKLALVFSVMNDYNLGRVNNPIRIMKNIRICVDCHNF 595
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+K +L+ +EIV+RD+ RFHHF GLCSC DYW
Sbjct: 596 MKLASRLLQKEIVIRDSNRFHHFMAGLCSCNDYW 629
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRL 95
H+ +IK L N+L++ Y + SIS +KKVF++M L SWNT++ AYA G+
Sbjct: 280 HSLLIKSMSEDHTVLNNALIHAYGRCGSISSSKKVFNQMKHHDLVSWNTMMKAYALHGQA 339
Query: 96 DLACEVF---NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF 133
++A ++F N+ P D+ ++ +++ + G + +F
Sbjct: 340 EIALQLFTKMNVPP--DATTFVSLLSACSHAGLVEEGTSLF 378
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/673 (34%), Positives = 366/673 (54%), Gaps = 71/673 (10%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++ ++ G A+R+F + P T T L +C LGDL A + V
Sbjct: 76 WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
G V V ++LL++Y++ G A VFDG
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDG--------------------------- 167
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
M +D V W++M+AG+ G EAL M++ M ++ + D+ + + AC +
Sbjct: 168 ----MPRKDRVAWSTMVAGFVTAGRPVEALAMYSRM-REHGVSDDEVVMVGVIQACMSTG 222
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
++G +H ++R C ++V+ T+L
Sbjct: 223 NARIGASVHGRLLR--------------HCM-------------------RMDVVTTTSL 249
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
+ Y K G + A ++F + R+ V W+A++ G+ QNG +A++LFR + +G +P +
Sbjct: 250 VSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCS 309
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
+ L + L +S+ L GK IH LR E + + A++ MYSK G++ +AR++FN
Sbjct: 310 WALVSALLACASVGFLKLGKSIHGFILRRLEWQCI-LGTAVLDMYSKCGSLESARKLFNK 368
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ R + V W ++I HG G +A+ LF+ + E GIKPDH T+ +L+A +H GLVE+
Sbjct: 369 LSSR-DLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEE 427
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G+ +++ M I+P H+ +VDLL R+GL++EA + + +M EP + W LLS C
Sbjct: 428 GKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGC 487
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQG 652
+K L+LG+ A+K+L + P++ G + + NLY++ KW+ IRK MK G KK G
Sbjct: 488 LNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPG 547
Query: 653 FSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ 712
+S ++++ H F +ED HPQ I +AK+ E++++G+VP T V HD++ED Q
Sbjct: 548 YSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDED---Q 604
Query: 713 MLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
+L +HSE+LAIAFGL++T T L I+KNLRVC DCH AIK+I K+VDREIVVRDA RFH
Sbjct: 605 LLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFH 664
Query: 773 HFKKGLCSCRDYW 785
HFK G CSC DYW
Sbjct: 665 HFKDGACSCGDYW 677
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 171/398 (42%), Gaps = 97/398 (24%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V R G VF+ ++L++ Y++ ++ A +VFD MP K +W+T+++ + GR
Sbjct: 129 VRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGR 188
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
P A+ M+ M + V + + V+ +
Sbjct: 189 -----------P--------------------VEALAMYSRMREHGVSDDEVVMVGVIQA 217
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
C + G+ G VH +++ + V T SL++MYAK G +A VF M +N +W
Sbjct: 218 CMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTW 277
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+++I+G++QNG EAL +F + D L
Sbjct: 278 -------------------------------SALISGFAQNGRAVEALDLFRELQAD-GL 305
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+P + L S L ACA++ LKLGK IH +I+R + +G A++ Y+K G +E
Sbjct: 306 QPCSWALVSALLACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLE---- 360
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
AR++F+ L RD+V W A++ +G
Sbjct: 361 -----------------------------SARKLFNKLSSRDLVLWNAIIACCGTHGCGH 391
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
DA+ LF+ + G KP++ T +++LS S ++ GK
Sbjct: 392 DALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 429
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 64/280 (22%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
++Q+ + + N +G VH R+++ + + V SL
Sbjct: 214 VIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSL------------------------ 249
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+S YAK G LD+AC+VF +MP R+ V+W+ +I + + GR A+ +F E+
Sbjct: 250 -------VSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQA 302
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
D + P + + S L +C ++G L GK +H F+++ C+ + ++L+MY+K G
Sbjct: 303 DGLQPCSWALVSALLACASVGFLKLGKSIHGFILRRLEWQCI-LGTAVLDMYSKCGSLES 361
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ +F +++ RD+V WN++IA +G
Sbjct: 362 ARKLF-------------------------------NKLSSRDLVLWNAIIACCGTHGCG 390
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
+AL +F L ++ +KPD T AS LSA ++ ++ GK
Sbjct: 391 HDALALFQE-LNETGIKPDHATFASLLSALSHSGLVEEGK 429
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/645 (36%), Positives = 375/645 (58%), Gaps = 44/645 (6%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
V SVL C +L +L +++H+ ++KT +LLN V ++A G+
Sbjct: 9 VVSVLDKCKSLCEL---RQIHAQMIKT----------NLLNHQFTV-SRLIAFCSLSGV- 53
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
SG LD A + F ++ + + ++I G+S E+L ++A
Sbjct: 54 ----------------SGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYAR 97
Query: 268 MLKDSSLKPD-KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML + +F++ S L AC L G+Q+H +++T VGN+++ Y
Sbjct: 98 MLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDF 157
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +E+A+++ ++ + +V+++ +++ GY+K G+I A+++F+++ D+DVV WT+M+
Sbjct: 158 GEIELARRVFDR--MPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISA 215
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEAS 445
Y QN A++LFR M+ G +P+ + ++LS + L ++ GK +HA ++ E S
Sbjct: 216 YVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELS 275
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
S + +ALI MYSK G I A VF I R+ W SMI LA HGL EA+ +F M
Sbjct: 276 SGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEM 335
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
+ I+P+ IT++G+L+ C+HGGLVE+GQ Y+ M +KI P H+ M+DL GRAG
Sbjct: 336 ERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGR 395
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
L++A I+NMP E D++AW ++LSA H ++++GK AA + + + PD+S +Y L N+
Sbjct: 396 LEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNI 455
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN----- 680
Y+ G+W+D A IR M+ GVKK G S + + KVH F L + D+ Y+
Sbjct: 456 YAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEF----LLGKELDSSYSGQVLA 511
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
K+A++ +K G+ PD VL D+E++ KE +L HSEK+AIAFGLI ++ + I+K
Sbjct: 512 KIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHSEKMAIAFGLIHINKSAPIHIVK 571
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCH +K + K+ +R+I++RD RFHHF+ G CSC +YW
Sbjct: 572 NLRVCCDCHCFMKLVSKVYNRQIIMRDQNRFHHFENGCCSCNEYW 616
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 210/426 (49%), Gaps = 41/426 (9%)
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ--DQVLPTQFTVTS 150
G LD A VF+ + + +S + +I +++ ++ ++ M+ + +F++ S
Sbjct: 55 GGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPS 114
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL +C L G++VH V+KT L V NS++ MY G+ +A+ VFD M ++
Sbjct: 115 VLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRD 174
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SWN +++ ++ +G ++LA+ F+ M ++DVVTW SMI+ Y QN +AL +F ML
Sbjct: 175 VVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLS 234
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD-ATGPVGNALISCYAKVGGV 329
L+PD + S LSA A+L ++ GK +HAY+ + + ++G +G+ALI Y+K G +
Sbjct: 235 -LGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYI 293
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL-RDRDVVAWTAMLVGYE 388
E A +F S+ R++ W +M+ G
Sbjct: 294 E---------------------------------NAYHVFRSISHRRNIGDWNSMISGLA 320
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSL 447
+GL ++A+++F M R +PN T +LS S ++ G+ S + +
Sbjct: 321 IHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRI 380
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+I ++ +AG + A V + + + ++W +++ A +HG E R +E
Sbjct: 381 QHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIE 440
Query: 508 LGIKPD 513
L PD
Sbjct: 441 LA--PD 444
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 195/415 (46%), Gaps = 47/415 (11%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH +++K L F+ NS++ Y I A++VFD MP + + SWN++++ Y K
Sbjct: 128 GRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLK 187
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G ++LA +VF M ++D V+WT++I Y + A+ +F EM+ + P + SV
Sbjct: 188 AGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSV 247
Query: 152 LASCTALGDLSAGKKVHSFVV--KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-RL 208
L++ LG + GK +H++V K LS + ++L++MY+K G A VF +
Sbjct: 248 LSAIADLGFVEEGKWLHAYVSMNKIELSSGF-IGSALIDMYSKCGYIENAYHVFRSISHR 306
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+N+ W NSMI+G + +G EAL +F M
Sbjct: 307 RNIGDW-------------------------------NSMISGLAIHGLAREALDIFVEM 335
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCYAKV 326
+ ++P++ T LS C++ ++ G Q + + ++ + + +I + +
Sbjct: 336 -ERMDIEPNEITFLGLLSTCSHGGLVEEG-QFYFESMHEKYKIVPRIQHYGCMIDLFGRA 393
Query: 327 GGVEIAQKIVE----QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
G +E A +++ ++ + I ++ G+I+IG R I L D ++
Sbjct: 394 GRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAI--ELAPDDSSSYVL 451
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
+ Y + G D ++ R M+R+ S+ML V+ + GK++ +S
Sbjct: 452 LSNIYAKAGRWDDVAKI-RLMMRQRGVKKIAGCSSML-VNGKVHEFLLGKELDSS 504
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/487 (42%), Positives = 321/487 (65%), Gaps = 9/487 (1%)
Query: 301 HAYIIRTEFDATGPVGNALISCYAK--VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
H ++ + G V N ++S Y+K VG + +A K+ ++ + + + + T++ Y +
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDE--MPHKDTVTLDTMITAYFE 58
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
A ++F+ + ++D+VAW +++ G+ NG +A+ L++ M EG +P+ +T+ ++
Sbjct: 59 -----SAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSL 113
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
LS + LA+L G++ H ++ G +L +NAL+ +Y+K G I+ AR++F+ + +
Sbjct: 114 LSACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERN 173
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSWTS+IV LA +G G+EA++ F+ M G+ P IT+VGVL AC+H G+V +G Y+
Sbjct: 174 VVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFK 233
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
MK + I P H+ MVDLLGRAGLL+EAY++I++MPL+P+ V W +LL AC +H +L
Sbjct: 234 RMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHL 293
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
LG A +LL +EP +SG Y L NLY+S +W D +R++M GV+KT G+S V++
Sbjct: 294 GLGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVEL 353
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
N VH F + D HPQ +AIY + ++ ++K G+VP TA+VL D+EE+ KE L +HS
Sbjct: 354 GNHVHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHS 413
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EK+AIAF LI+T T +RI+KNLRVC DCH AIK I K+ +R+IVVRD +RFHHF+ G
Sbjct: 414 EKIAIAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGS 473
Query: 779 CSCRDYW 785
CSCRDYW
Sbjct: 474 CSCRDYW 480
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 164/349 (46%), Gaps = 45/349 (12%)
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAK--VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
H VK G+ V N++L+ Y+K VGD +A +FD M K+ + + +++ + S
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYFES- 59
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
A F+ M E+D+V WNS+I G++ NG EAL ++ M ++PD FT+ S L
Sbjct: 60 ----AYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRM-GSEGVEPDGFTMVSLL 114
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SACA L L LG++ H Y+++ + NAL+ YAK G + A+KI ++ GI
Sbjct: 115 SACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGI---- 170
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
+R+VV+WT+++VG NG K+A+E F+ M R
Sbjct: 171 ----------------------------ERNVVSWTSLIVGLAVNGFGKEALEHFKDMER 202
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNIN 464
EG P+ T +L S ++ G + + + ++ + +AG +
Sbjct: 203 EGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLK 262
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHG-LGEEAIQLFERMLELGIKP 512
A + + V W +++ A HG LG A F R L ++P
Sbjct: 263 EAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGA---FARARLLQLEP 308
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 186/395 (47%), Gaps = 60/395 (15%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAK--TESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
H + +K G+ ++ N++++ Y+K ++ A K+FDEMP K + +T+++AY
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAY---- 56
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+ A +VF LMP +D V+W ++I + G+ A+ ++ M + V P FT+ S+L+
Sbjct: 57 -FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLS 115
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
+C L L G++ H ++VK GL+ ++ N+LL++YAK G A+ +FD M
Sbjct: 116 ACAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMG------ 169
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
IER+VV+W S+I G + NG+ EAL F +M ++
Sbjct: 170 ------------------------IERNVVSWTSLIVGLAVNGFGKEALEHFKDMERE-G 204
Query: 274 LKPDKFTLASTLSACAN-------LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
L P + T L AC++ E K K+ + + R E ++ +
Sbjct: 205 LVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYG------CMVDLLGRA 258
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLL-----DGYIKIGDIGPARRIFDSLRDRDVVAWT 381
G ++ A ++ + N + + TLL G++ +G AR + +D
Sbjct: 259 GLLKEAYDYIQDMPLQ-PNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLL 317
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREG-PKPNNYTL 415
+ L EQ D E+ R+M+ EG K Y+L
Sbjct: 318 SNLYASEQRW--SDVHEVRRTMLSEGVRKTPGYSL 350
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 47/222 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ H ++K GL+ ++ N+L++ YAK +IS A+K+FDEM ++
Sbjct: 125 LGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIE------------- 171
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
R+ VSWT++IV G K A+ F +M ++ ++P++ T
Sbjct: 172 -----------------RNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVG 214
Query: 151 VLASCTALGDLSAG-------KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
VL +C+ G ++ G K+ + V + GC ++++ + G A
Sbjct: 215 VLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGC------MVDLLGRAGLLKEAYDYI 268
Query: 204 DGMRLK-NVSSWNVVV---SLHIHSGRLDLARAQFDQMIERD 241
M L+ N W ++ ++H H G ARA+ Q+ +D
Sbjct: 269 QDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKD 310
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/596 (39%), Positives = 352/596 (59%), Gaps = 11/596 (1%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE-RDVVTWNSMIAGYSQ 254
++ A+ V G+ +N S ++ +I L AR FDQ + WN MI YS+
Sbjct: 73 QIHAQVVTHGLA-QNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSK 131
Query: 255 NGYDFEALGMFANMLKDS-SLKPDKFTLASTLSACANLEKLK-LGKQIHAYIIRTEFDAT 312
E+L +F ML DK+T +AC+ L+ G+ +H +++ +++
Sbjct: 132 TPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESD 191
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
VGN+L++ Y+ + A+++ ++ + +VI +T+++ GY G++ AR +FD +
Sbjct: 192 IFVGNSLVNMYSIFSRMVDAKRVFDE--MPQRDVITWTSVVKGYAMRGELVRARELFDMM 249
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSLASLDHG 431
R+ V+W M+ GY + +A++ F M+ + KPN L ++LS + L +LD G
Sbjct: 250 PGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQG 309
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
K IH ++ S ++S ALI MY+K G I+ ARRVF+ +H +++ ++WTSMI L+
Sbjct: 310 KWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLH-KRDLLTWTSMISGLSM 368
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
HGLG E + F ML G KPD IT +GVL C+H GLVE+G ++ M + I P
Sbjct: 369 HGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLE 428
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+ ++DLLGRAG L+ A+ I++MP+EPDVVAW +LLSACR+H ++DLG+ + +
Sbjct: 429 HYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAEL 488
Query: 612 EP-DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
P + G Y L NLY+S G+WE +RK+M G + G SW++I VH F D
Sbjct: 489 CPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADK 548
Query: 671 LHPQRDAIYNKMAKIWDEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
LHP+ I K+ ++ I E G+VP T VL D+ E+ KEQ + HSEKLA+AFGL+S
Sbjct: 549 LHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLS 608
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T E T+RI KNLR C DCHSA+K I + +REIVVRD +RFH F+ G CSC DYW
Sbjct: 609 TQEG-TIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTDYW 663
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 232/527 (44%), Gaps = 80/527 (15%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKL--VHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
PS S +H L + P + ++ +HA+++ GL + L L++ Y ++
Sbjct: 44 PSGTSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNL 103
Query: 65 SYAKKVFDEMP-VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
S+A+ VFD+ P + WN ++ AY+K + +F+ M
Sbjct: 104 SFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAH--------------- 148
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSA-GKKVHSFVVKTGLSGCVNV 182
GR +A ++T T V +C+ L G+ VH VVK G + V
Sbjct: 149 GRPTSA--------------DKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFV 194
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
NSL+NMY+ + AK VFD M ++V +W VV + G L AR FD M R+
Sbjct: 195 GNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRND 254
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V+W M+AGY + + EAL F +ML +KP++ L S LSACA+L L GK IH
Sbjct: 255 VSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHV 314
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
YI + + + ALI YAK G ++ A
Sbjct: 315 YIDKNRILLSSNISTALIDMYAKCGRIDCA------------------------------ 344
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
RR+FD L RD++ WT+M+ G +GL + + F M+ EG KP++ TL +L+
Sbjct: 345 ---RRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGC 401
Query: 423 SSLASLDHGKQI-HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S ++ G I H G L LI + +AG + +A + + V+
Sbjct: 402 SHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVA 461
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
W +++ A HG + L ER+ I ++ L +HGG
Sbjct: 462 WRALLSACRIHG----DVDLGERI---------INHIAELCPGSHGG 495
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P++ T +L SL + KQIHA + G A + S+ LI Y N++ AR V
Sbjct: 53 PSHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG--IKPDHITYVGVLTACT-H 526
F+ T+ W MI A ++ +E++ LF +ML G D T+ V TAC+ H
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRH 169
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
L G+ + M V K F S+V++ + +A + MP + DV+
Sbjct: 170 PTLRGYGENVHGM---VVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMP-QRDVIT 225
Query: 585 WGSLL 589
W S++
Sbjct: 226 WTSVV 230
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/776 (33%), Positives = 404/776 (52%), Gaps = 95/776 (12%)
Query: 20 LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTL 79
L+ L +R FV L CG H S+ L S+ +A+ E + + ++ V T
Sbjct: 230 LEGLLPNRASFVAILS-----SCGDHSSLPLARSI---HARVEELGF----LGDVVVAT- 276
Query: 80 CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
+++ Y + G +D + VF M R+ VSW +I + + G A ++ M Q+
Sbjct: 277 ----ALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQE 332
Query: 140 QVLPTQFT-VTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
P + T VT++ A+C++ DL +H ++ GL G V V +L+ MY
Sbjct: 333 GFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGS----- 387
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+G +D ARA FD + +++V+WN+M+ Y NG
Sbjct: 388 --------------------------TGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGR 421
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVG 316
EA+ +FA M K SL P+K + + L C E + + IHA ++ F +
Sbjct: 422 AREAMELFAAM-KRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESSIA 477
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N ++ +A+ G +E A FD+ +D
Sbjct: 478 NGVVRMFARSGSLE---------------------------------EAVAAFDATVVKD 504
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V+W + A+ F +M EG +P+ +TL +++ V + L +L+ G+ I
Sbjct: 505 SVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQ 564
Query: 437 SALRSGEAS-SLSVSNALITMYSKAGN-INAARRVF-NLIHWRQETVSWTSMIVALAQHG 493
+ E + V++A++ M +K G+ ++ R+F + R++ V+W +MI A AQHG
Sbjct: 565 QLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHG 624
Query: 494 LGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP-S 551
G +A++LF M + ++PD T+V VL+ C+H GLVE G + + + V I+ P
Sbjct: 625 HGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVE 684
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+A +VD+LGR G L+EA +FI MPL D V W SLL AC + +L+ G+ AA + +
Sbjct: 685 HYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIEL 744
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK-TQGFSWVQIQNKVHVFGVEDW 670
+S Y L N+Y++ G+WED+ +R+ M VKK G S + ++N+VH F D
Sbjct: 745 YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDR 804
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HPQ DAIY ++ ++ I+E G+VPDT VLHDVEE+ KEQ+L +HSEKLAIAFGLIS
Sbjct: 805 SHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISV 864
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF-KKGLCSCRDYW 785
P ++R++KNLRVC DCH+A KFI ++ REI VRD RFHHF K G CSC DYW
Sbjct: 865 PHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 139/600 (23%), Positives = 246/600 (41%), Gaps = 114/600 (19%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
P+E A LL+ + + G+ +H +I+K GL + L N L+ Y+K S+ A F
Sbjct: 23 PIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAF 82
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
+ + + +WNT+++A + VF+L R
Sbjct: 83 SALRSRGIATWNTLIAAQSSPA------AVFDLY------------------------TR 112
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGD-----------LSAGKKVHSFVVKTGLSGCV 180
M +E + P + T+ +VL + A GD ++ + VH + + L +
Sbjct: 113 MKLEERAEN-RPNKLTIIAVLGA-IASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDL 170
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
V +LL+ Y K G A VF +++ ++ WN + +A A D+ +R
Sbjct: 171 FVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAI----------MACAGNDERPDR 220
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
AL + M + L P++ + + LS+C + L L + I
Sbjct: 221 --------------------ALLLVRRMWLE-GLLPNRASFVAILSSCGDHSSLPLARSI 259
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA + F V AL++ Y + G V+ IA
Sbjct: 260 HARVEELGFLGDVVVATALVTMYGRCGSVD--------------ESIA------------ 293
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
+F+++ R+ V+W AM+ + Q G A ++ M +EG +PN T L
Sbjct: 294 -------VFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALK 346
Query: 421 VSSSLASLDHGKQ--IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
+ S +S D G+ +H +G + V AL+TMY G I+ AR F+ I +
Sbjct: 347 AACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKN- 405
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSW +M+ A +G EA++LF M + P+ ++Y+ VL C V + + +
Sbjct: 406 IVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHA 462
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
+ S +V + R+G L+EA + ++ D V+W + ++A ++L
Sbjct: 463 EVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVK-DSVSWNTKVAALSAREDL 521
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 193/468 (41%), Gaps = 84/468 (17%)
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
D +P + T+ +L C DL+ G+++H +VK GL+ + N L+ MY+K
Sbjct: 18 HDDYIPIE-TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRS-- 74
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
LD A A F + R + TWN++IA S
Sbjct: 75 -----------------------------LDDANAAFSALRSRGIATWNTLIAAQSSPAA 105
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
F+ L + + + +P+K T+ + L A A+ G + R
Sbjct: 106 VFD-LYTRMKLEERAENRPNKLTIIAVLGAIAS------GDPSSSSSSRAP--------- 149
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+ I + S + ++ T LLD Y K G + A +F ++ D+
Sbjct: 150 -------SIAQARIVHDDIRGSDLER-DLFVATALLDAYGKCGCVESALEVFSRIQVPDL 201
Query: 378 VAWTAMLVGYEQNGLNKD-AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+ W A ++ N D A+ L R M EG PN + A+LS +SL + IHA
Sbjct: 202 ICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHA 261
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
G + V+ AL+TMY + G+++ + VF + R VSW +MI A AQ G
Sbjct: 262 RVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNH-VSWNAMIAAFAQCGHRS 320
Query: 497 EAIQLFERMLELGIKPDHITYVGVL-TACT------------HGGLVEQGQRYYNMMKNV 543
A ++ RM + G +P+ IT+V L AC+ HG + G M+
Sbjct: 321 AAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGT- 379
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++V + G G + A + +P + ++V+W ++L+A
Sbjct: 380 -----------ALVTMYGSTGAIDRARAAFDAIPAK-NIVSWNAMLTA 415
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/663 (34%), Positives = 372/663 (56%), Gaps = 69/663 (10%)
Query: 125 RFKNAIRMF--VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
R++ A+ +F +E+ D T +++++C L + K+V +++V +G + V
Sbjct: 95 RYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYV 154
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N V+ +H+ G + AR FD+M E+D+
Sbjct: 155 MNR-------------------------------VLFVHVKCGLMLDARKLFDEMPEKDM 183
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
+W +MI G+ +G EA G+F M ++ + + T + + A A L +++G+QIH+
Sbjct: 184 ASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSR-TFTTMIRASAGLGLVQVGRQIHS 242
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++ G + +SC L+D Y K G I
Sbjct: 243 CALKR-----GVGDDTFVSC----------------------------ALIDMYSKCGSI 269
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +FD + ++ V W +++ Y +G +++A+ + M G K +++T+S ++ +
Sbjct: 270 EDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRIC 329
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ LASL++ KQ HA+ +R G + + + AL+ YSK G + A VFN + R+ +SW
Sbjct: 330 ARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMR-RKNVISW 388
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
++I HG GEEA+++FE+ML G+ P+H+T++ VL+AC++ GL E+G + M
Sbjct: 389 NALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 448
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
HK+KP H+A MV+LLGR GLL EAY I + P +P W +LL+ACR+H+NL+LGK
Sbjct: 449 DHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGK 508
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AAE L +EP+ Y L NLY+S GK ++AA + +++K G++ +W++++ +
Sbjct: 509 LAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQS 568
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
+ F D H Q IY K+ + EI G+V + ++L DV+E+ ++++L++HSEKLA
Sbjct: 569 YAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEE-EQRILKYHSEKLA 627
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
IAFGLI+TP T L+I + RVC DCHSAIKFI + REIVVRDA+RFHHF+ G CSC
Sbjct: 628 IAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCG 687
Query: 783 DYW 785
DYW
Sbjct: 688 DYW 690
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 70/435 (16%)
Query: 63 SISYAKKVFDEMP----VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIV 118
SI K+VF+ M L N +L + K G + A ++F+ MP +D SW T+I
Sbjct: 132 SIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIG 191
Query: 119 TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG 178
+ + G F A +F+ M ++ T T+++ + LG + G+++HS +K G+
Sbjct: 192 GFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGD 251
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
V+ +L++MY+K G A VFD M K
Sbjct: 252 DTFVSCALIDMYSKCGSIEDAHCVFDQMPEKT---------------------------- 283
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
V WNS+IA Y+ +GY EAL + M +DS K D FT++ + CA L L+ K
Sbjct: 284 ---TVGWNSIIASYALHGYSEEALSFYYEM-RDSGAKIDHFTISIVIRICARLASLEYAK 339
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
Q HA ++R +D T V N T L+D Y K
Sbjct: 340 QAHAALVRRGYD-TDIVAN--------------------------------TALVDFYSK 366
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
G + A +F+ +R ++V++W A++ GY +G ++AVE+F M+REG PN+ T A+
Sbjct: 367 WGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAV 426
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQ 477
LS S + G +I S R + ++ A ++ + + G ++ A + ++
Sbjct: 427 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKP 486
Query: 478 ETVSWTSMIVALAQH 492
T W +++ A H
Sbjct: 487 TTNMWATLLTACRMH 501
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 39/350 (11%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VG+ +H+ +K G+ F+ +L++ Y+K SI A VFD+MP KT WN+I+++YA
Sbjct: 236 VGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYA 295
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G Y+E A+ + EM FT++
Sbjct: 296 LHG--------------------------YSE-----EALSFYYEMRDSGAKIDHFTISI 324
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ C L L K+ H+ +V+ G + +L++ Y+K G A VF+ MR KN
Sbjct: 325 VIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKN 384
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFA 266
V SWN +++ + + G+ + A F+QM+ + VT+ ++++ S +G +F
Sbjct: 385 VISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFY 444
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+M +D +KP A + L + L + + I F T + L++
Sbjct: 445 SMSRDHKVKPRAMHYACMVEL---LGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMH 501
Query: 327 GGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+E+ + E G+ + + LL+ Y G + A + +L+ +
Sbjct: 502 ENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRK 551
>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
Length = 912
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 263/796 (33%), Positives = 404/796 (50%), Gaps = 120/796 (15%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N+L+ Y+ I AK VFD P + SWN +L+AYA+ G LD A EVF+ P +D V
Sbjct: 175 NALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTPQQDIV 234
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
S T +I +A+ +F M + F + + G + + + +
Sbjct: 235 SCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQ----GKIGEAENLSRRM 290
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD-GMRLKNVSSWNVVVSLHIHSGRLDLA 230
+ + + S+L+ Y++ G A+ +FD R + SWN ++S + +G L LA
Sbjct: 291 PQQDPT----LWTSMLSAYSRHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLA 346
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R+ F++M DVV W ++IA QNG EA ++ L P++ +A T
Sbjct: 347 RSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLY-------DLIPERDLVAWT------ 393
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
ALI Y G + ++++ + + N ++ T
Sbjct: 394 ---------------------------ALIQAYGVNGKLTESKRVY--ALMPERNRVSHT 424
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
++ Y + G++ AR++ D+L D D T+M+V Y QNG KDA E+F S+ P
Sbjct: 425 AMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSI----KNP 480
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
+ +AM+ SS LDH K + S + +L N ++ Y++AGN++ A+ +F
Sbjct: 481 DVIACNAMMEAYSSAQMLDHAKAM----FDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIF 536
Query: 471 NLIHWR------------------------------QETVSWTSMIVALAQHGLGEEAIQ 500
+ I + ++TV+WT+M+ +AQHG EA +
Sbjct: 537 DSIPHKNVVSHNVMIVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQE 596
Query: 501 LFERM-------------------------------LELGIKPDHITYVGVLTACTHGGL 529
LF +M G KPDHIT++G+L AC+H GL
Sbjct: 597 LFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGL 656
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
VE+G ++ M+ H + P H+ MVD+LGRAG L A +E MP PDV AWGSLL
Sbjct: 657 VEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLL 716
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
+C+ H ++ LG AAE LL + +SG Y L N+YSS G+ DA +R MK GVKK
Sbjct: 717 GSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKK 776
Query: 650 TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G S +++ +H F + HP+ I ++++++ + +K+ G+ PDT +VLH + ++
Sbjct: 777 QPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSILDEE 836
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
KE +L +HSEKLAIAF I+ T +RIMKNLRVC+DCH+A KF+ KL+ REI+VRD
Sbjct: 837 KEVLLSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGY 896
Query: 770 RFHHFKKGLCSCRDYW 785
RFH+F+ G CSC DYW
Sbjct: 897 RFHNFENGTCSCGDYW 912
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 235/504 (46%), Gaps = 75/504 (14%)
Query: 134 VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV 193
+ +++ QV Q + + + SC DL+ G+K+H+ + G + + N ++ MY K
Sbjct: 1 MSLLKTQVRELQNALATAIRSCGIAKDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKC 60
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
A+AVF+ + NV S +++ + +G L A+A FDQ+ +VV+WNS+IAG+S
Sbjct: 61 SRIDDAQAVFNELPEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFS 120
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
Q+G+ A +FA M + SS
Sbjct: 121 QHGFMSNADEIFARMPRWSS---------------------------------------- 140
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
N++I+ YA+ G + A + +++ NVI++ L+ GY I A+ +FD
Sbjct: 141 SSWNSMITGYAQSGDLASATAMFDRT--PEHNVISWNALITGYSDNRMIPEAKGVFDRAP 198
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
RD ++W AML Y Q+G A E+F P+ + + + M+ + L H +
Sbjct: 199 GRDKISWNAMLTAYAQSGDLDSAKEVF----DRTPQQDIVSCTLMIKACAVQEILGHAVE 254
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
I A A+ A S S +I +Y G I A + + +Q+ WTSM+ A ++HG
Sbjct: 255 IFA-AMPDRNAVSYSF---MIQIYIDQGKIGEAENLSRRMP-QQDPTLWTSMLSAYSRHG 309
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH- 552
L EEA ++F+R + D +++ +L+A G + + + M P H
Sbjct: 310 LVEEARRIFDRAAR---RDDEVSWNALLSAYAQAGHLHLARSTFERM---------PRHD 357
Query: 553 ---FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
+ +++ + G+ G L+EA + +P E D+VAW +L+ A V+ GK+ K +
Sbjct: 358 VVAWTALIAVSGQNGQLEEAEVLYDLIP-ERDLVAWTALIQAYGVN-----GKLTESKRV 411
Query: 610 --LIEPDNSGAYSALCNLYSSCGK 631
L+ N +++A+ YS G+
Sbjct: 412 YALMPERNRVSHTAMIIAYSQNGE 435
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 45 HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNL 104
H +V N ++ YA ++ A+++F M K +W +++ A+ GRL A E+F
Sbjct: 541 HKNVVSHNVMIVAYAHNMDLAEARRIFYSMDEKDTVTWTAMVAMVAQHGRLAEAQELFAK 600
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
MP R+ VSW ++I G A+R M + P T +L +C+ +G + G
Sbjct: 601 MPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEG 660
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 335/539 (62%), Gaps = 25/539 (4%)
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L D ++PD +L + L ACA++ GK +H +R+ VGNAL+ YAK G
Sbjct: 4 LGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGM 63
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD----VVAWTAML 384
V+ A K+ ++ I +V+++ +++GY +IG A +F+ +R+ + VV+W+A++
Sbjct: 64 VDEASKVFDR--IKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVI 121
Query: 385 VGYEQNGLN---------------KDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLAS 427
+ Q GL DA+ELF M ++ KPN +T+S L + LA+
Sbjct: 122 AAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAA 181
Query: 428 LDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
L G+QIHA LR+ +++ L V+N LI MY+K+G+I+ AR VF+ + ++ VSWTS++
Sbjct: 182 LRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK-QKNFVSWTSLM 240
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
HG G+EA+++F+ M +G++PD +T + VL AC+H G+++QG ++N M +
Sbjct: 241 TGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGV 300
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
P H+A MVDLLGRAG L EA IE M +EP + W +LLS CR+H N++LG+ AA+
Sbjct: 301 IPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAK 360
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
+LL + +N G+Y+ L N+Y++ +W+D A +R MK G++K G SWVQ + F
Sbjct: 361 QLLELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFY 420
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
V D HPQ IY + + IK +G+VP+T+ LHDV+++ K +L HSEKLA+A+G
Sbjct: 421 VADKTHPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYG 480
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++ + +RI KNLRVC DCH+AI +I ++D EI++RD++RFHHFKKG CSC YW
Sbjct: 481 ILISAPGAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 194/396 (48%), Gaps = 61/396 (15%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P ++ +VL +C ++G GK VH V++G + V N+L++MYAK G A V
Sbjct: 11 PDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKV 70
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYD 258
FD ++ K+V SWN +V+ + GR + A F++M IE +VV+W+++IA ++Q G
Sbjct: 71 FDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLG 130
Query: 259 FEALGMFANML----------------KDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
E L +F M +D +KP+ FT++ L ACA L L+LG+QIHA
Sbjct: 131 CETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHA 190
Query: 303 YIIRTEFD-ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
YI+R FD A V N LI YAK G +++A
Sbjct: 191 YILRNHFDSAFLYVANCLIDMYAKSGDIDVA----------------------------- 221
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
R +FD+L+ ++ V+WT+++ GY +G K+A+E+F M R G +P+ TL +L
Sbjct: 222 ----RFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYA 277
Query: 422 SSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S +D G + S + G ++ + +AG +N A + + ++
Sbjct: 278 CSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSI 337
Query: 481 SWTSMIVALAQHG---LGEEAIQLFERMLELGIKPD 513
W +++ H LGE A + ++LEL + D
Sbjct: 338 VWVALLSGCRIHANVELGEHAAK---QLLELNSEND 370
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 26/273 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VH ++ G +F+ N+L++ YAK + A KVFD + K + SWN +++ Y++
Sbjct: 32 GKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQ 91
Query: 92 QGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ------- 140
GR + A +F M + VSW+ +I + + G + +F EM +
Sbjct: 92 IGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALEL 151
Query: 141 ----------VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL-SGCVNVTNSLLNM 189
V P FT++ L +C L L G+++H+++++ S + V N L++M
Sbjct: 152 FSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDM 211
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTW 245
YAK GD +A+ VFD ++ KN SW +++ + GR A FD+M ++ D VT
Sbjct: 212 YAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTL 271
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
++ S +G + + F +M K+ + P +
Sbjct: 272 LVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQ 304
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/663 (35%), Positives = 372/663 (56%), Gaps = 69/663 (10%)
Query: 125 RFKNAIRMF--VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
R + A+ +F +E+ D T +++++C L + K+V ++++ +G + V
Sbjct: 96 RHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYV 155
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N +L M+ K G +M LD AR FD+M E+DV
Sbjct: 156 MNRVLFMHVKCG--LM----------------------------LD-ARKLFDEMPEKDV 184
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
+W +M+ G G EA +F M K+ + + T A+ + A A L +++GKQIH+
Sbjct: 185 ASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSR-TFATMIRASAGLGLVQVGKQIHS 243
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
++ G + +SC L+D Y K G I
Sbjct: 244 CALKR-----GVGDDHFVSC----------------------------ALIDMYSKCGSI 270
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +FD + ++ V W +++ Y +G +++A+ L+ M G +++T+S ++ +
Sbjct: 271 EDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRIC 330
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ LASL+H KQ HA+ +R G A+ + + AL+ YSK G + AR VFN + + +SW
Sbjct: 331 ARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMR-HKNVISW 389
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
++I HG G+EA+++FE+ML+ G+ P H+T++ VL+AC++ GL ++G + MK
Sbjct: 390 NALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKR 449
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
HK+KP H+A M++LLGR LL EAY I P +P W +LL+ACR+HKNL+LGK
Sbjct: 450 DHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGK 509
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AAEKL +EP+ Y L NLY+S GK ++AA I +++K G++ SWV+++ +
Sbjct: 510 LAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQP 569
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
+ F D H Q IY K+ + EI + G+ + ++L DV+E+ ++++L++HSEKLA
Sbjct: 570 YAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEE-EQRILKYHSEKLA 628
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
IAFGLI+TP T L+I + RVC DCHSAIK I + REIVVRDA+RFHHF+ G CSC
Sbjct: 629 IAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCG 688
Query: 783 DYW 785
DYW
Sbjct: 689 DYW 691
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 198/446 (44%), Gaps = 70/446 (15%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMP----VKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
++L++ SI K+VF+ M L N +L + K G + A ++F+ MP
Sbjct: 122 DALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPE 181
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+D SW T++ + G F A R+F+ M ++ T +++ + LG + GK++
Sbjct: 182 KDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQI 241
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
HS +K G+ V+ +L++MY+K G A VFD M K
Sbjct: 242 HSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKT----------------- 284
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
V WNS+IA Y+ +GY EAL ++ M +DS D FT++ +
Sbjct: 285 --------------TVGWNSIIASYALHGYSEEALSLYFEM-RDSGTTVDHFTISIVIRI 329
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
CA L L+ KQ HA ++R F AT V N
Sbjct: 330 CARLASLEHAKQAHAALVRHGF-ATDIVAN------------------------------ 358
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
T L+D Y K G + AR +F+ +R ++V++W A++ GY +G ++AVE+F M++EG
Sbjct: 359 --TALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEG 416
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAA 466
P + T A+LS S G +I S R + ++ A +I + + ++ A
Sbjct: 417 VTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEA 476
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ W +++ A H
Sbjct: 477 YALIRTAPFKPTANMWAALLTACRMH 502
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 162/352 (46%), Gaps = 39/352 (11%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H+ +K G+ F+ +L++ Y+K SI A VFD+MP KT WN+I+++YA
Sbjct: 237 VGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYA 296
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G Y+E A+ ++ EM FT++
Sbjct: 297 LHG--------------------------YSE-----EALSLYFEMRDSGTTVDHFTISI 325
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ C L L K+ H+ +V+ G + + +L++ Y+K G A+ VF+ MR KN
Sbjct: 326 VIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKN 385
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFA 266
V SWN +++ + + G+ A F+QM++ V VT+ ++++ S +G +F
Sbjct: 386 VISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFY 445
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
+M +D +KP A + L + L + +A I F T + AL++
Sbjct: 446 SMKRDHKVKPRAMHYACMIEL---LGRESLLDEAYALIRTAPFKPTANMWAALLTACRMH 502
Query: 327 GGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+E+ + E+ G+ + + LL+ Y G + A I +L+ + +
Sbjct: 503 KNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGL 554
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 253/754 (33%), Positives = 396/754 (52%), Gaps = 102/754 (13%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VHA +++ G V + N+LM YAK + A+KVFD M V SWN +++ +
Sbjct: 207 MGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHF 266
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + E +F+ M+ D+V P T+TS
Sbjct: 267 ENGECNAGLE-------------------------------LFLTMLHDEVQPNLMTITS 295
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V + L D++ K++H VK G +G V NSL+ MYA +G A+ VF
Sbjct: 296 VTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFS------ 349
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
R+D RD +TW +MI+GY +NG+ +AL ++A +++
Sbjct: 350 ---------------RMD----------TRDAMTWTAMISGYEKNGFPDKALEVYA-LME 383
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+++ PD T+AS L+ACA L L +G ++H
Sbjct: 384 VNNVSPDDITIASALAACACLGSLDVGVKLH----------------------------- 414
Query: 331 IAQKIVEQSG-ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
++ E G ISY ++ +L+ Y K I A +F + ++DVV+W++M+ G+
Sbjct: 415 ---ELAESKGFISY--IVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCF 469
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N N +A+ FR M+ + KPN+ T A L+ ++ +L GK+IHA LR G +
Sbjct: 470 NHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYL 528
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI +Y K G A F H ++ VSW MI HG G+ A+ F +M+++G
Sbjct: 529 PNALIDLYVKCGQTGYAWAQF-CAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIG 587
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
PD +T+V +L AC+ GG+V +G ++ M + I P H+A MVDLL RAG L EA
Sbjct: 588 ECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEA 647
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
YNFI MP+ PD WG+LL+ CR+H++++LG++AA+ +L +EP+++G + LC+LY+
Sbjct: 648 YNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADA 707
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
W+ A +RK+M+ G+ G SWV+++ VH F +D HPQ I + I++ +
Sbjct: 708 CLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERM 767
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K G+ P + D E +K+ + HSE+LA+AFGLI+T T++ + KN C CH
Sbjct: 768 KASGYAPVESHCPED--EVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCH 825
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+K I +V R+I+VRD+ + HHFK G CSC D
Sbjct: 826 RILKMISNIVRRDIIVRDSKQLHHFKDGSCSCGD 859
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/598 (38%), Positives = 352/598 (58%), Gaps = 36/598 (6%)
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY+K+GD A AV+ MR KN S N++++ ++ +G L AR FD+M +R + TWN+M
Sbjct: 1 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 60
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
IAG Q ++ E L +F M PD++TL S S A L + +G+QIH Y I+
Sbjct: 61 IAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY- 118
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
G+E L+++ ++L Y++ G + +
Sbjct: 119 -------------------GLE-------------LDLVVNSSLAHMYMRNGKLQDGEIV 146
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
S+ R++VAW +++G QNG + + L++ M G +PN T +LS S LA
Sbjct: 147 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 206
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
G+QIHA A++ G +S ++V ++LI+MYSK G + A + F+ ++ V W+SMI A
Sbjct: 207 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISA 265
Query: 489 LAQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
HG G+EAI+LF M E ++ + + ++ +L AC+H GL ++G ++MM + K
Sbjct: 266 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 325
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ +VDLLGRAG L +A I +MP++ D+V W +LLSAC +HKN ++ + ++
Sbjct: 326 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 385
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
+L I+P++S Y L N+++S +W D + +RKSM+ VKK G SW + + +VH F +
Sbjct: 386 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 445
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGL 727
D + IY+ + ++ E+K G+ PDTASVLHD++E+ KE L HSEKLA+AF L
Sbjct: 446 GDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFAL 505
Query: 728 ISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ PE +RI+KNLRVC+DCH A K+I + +REI +RD +RFHHF G CSC DYW
Sbjct: 506 MILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 197/464 (42%), Gaps = 70/464 (15%)
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
Y+K A V+ M K S N +++ Y + G L A +VF+ MP+R +W +I
Sbjct: 2 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 61
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ + + +F EM P ++T+ SV + L +S G+++H + +K GL
Sbjct: 62 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 121
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+ V +SL +MY + G + V M ++N
Sbjct: 122 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRN--------------------------- 154
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
+V WN++I G +QNG L ++ M+K S +P+K T + LS+C++L G
Sbjct: 155 ----LVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQG 209
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
+QIHA I+ + V ++LIS Y+K G
Sbjct: 210 QQIHAEAIKIGASSVVAVVSSLISMYSKCGC----------------------------- 240
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLS 416
+G A + F D D V W++M+ Y +G +A+ELF +M + + N
Sbjct: 241 ----LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 296
Query: 417 AMLSVSSSLASLDHGKQIHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
+L S D G ++ + + G L ++ + +AG ++ A + +
Sbjct: 297 NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 356
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP-DHITYV 518
+ + V W +++ A H E A ++F+ +L+ I P D YV
Sbjct: 357 KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYV 398
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 62/264 (23%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ +G+ +H IK GL L + + +SL + Y + + + V MPV+ L +WNT++
Sbjct: 103 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 162
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
A+ G + ++ +M +S P +
Sbjct: 163 MGNAQNGCPETVLYLYKMM----KISGCR---------------------------PNKI 191
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +VL+SC+ L G+++H+ +K G S V V +SL++MY+K
Sbjct: 192 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC------------- 238
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
G L A F + + D V W+SMI+ Y +G EA+ +F
Sbjct: 239 ------------------GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 280
Query: 267 NMLKDSSLKPDKFTLASTLSACAN 290
M + ++++ ++ + L AC++
Sbjct: 281 TMAEQTNMEINEVAFLNLLYACSH 304
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +HA IK G V + +SL++ Y+K + A K F E + W++++SAY
Sbjct: 209 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 268
Query: 92 QGRLDLACEVFNLMPNR-----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
G+ D A E+FN M + + V++ ++ + G + +F MV+
Sbjct: 269 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 320
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/588 (37%), Positives = 347/588 (59%), Gaps = 36/588 (6%)
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
A+ G+ + S + ++ ++ H R AR FD++ + + V +M +GY +N +
Sbjct: 119 ALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYH 178
Query: 261 ALGMFANML-KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
+L +F M+ DS+ D+ SA A + + +HA I + F+ V N +
Sbjct: 179 SLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTM 238
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ YAK G D+ AR++FD++ +RDVV+
Sbjct: 239 LDSYAKGGS-------------------------------RDLEVARKVFDTM-ERDVVS 266
Query: 380 WTAMLVGYEQNGLNKDAVELFRSM--VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
W +M+ Y QNG++ +A+ L+ M V G K N LSA+L + ++ GK+IH
Sbjct: 267 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQ 326
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+R G ++ V +++ MYSK G + A R F I + +SW++MI HG G+E
Sbjct: 327 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK-EKNILSWSAMITGYGMHGRGQE 385
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A+++F M G++P++IT++ VL AC+H GL+++G+ +YN MK I+ H+ MV
Sbjct: 386 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV 445
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGRAG L EAY+ I+ M ++PD WG+LLSACR+HKN++L +++ ++L ++ NSG
Sbjct: 446 DLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSG 505
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L N+Y+ W+D IR +K ++K G+S +++ K+++F V D HPQ
Sbjct: 506 YYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIE 565
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY+ + K+ + ++E G+VP+T SVLHD++E+ KE LR HSEKLA+AF L+++ + +
Sbjct: 566 IYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIH 625
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I+KNLRVC+DCH+A+KFI K+ +REI++RD RFHHFK GLCSCRDYW
Sbjct: 626 IIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 673
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 203/477 (42%), Gaps = 95/477 (19%)
Query: 35 VHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
+H ++ GL S + ++L++ Y A++ FDE+P + S Y +
Sbjct: 115 LHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNN 174
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+ + E+F M DS S +V + F+ ++ +
Sbjct: 175 LVYHSLELFRAMIASDSAS-----------------------VVDEAAALVAFSASARVP 211
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
D +H+ + K G V N++L+ YAK G
Sbjct: 212 ------DRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGG------------------- 246
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK-DS 272
S L++AR FD M ERDVV+WNSMIA Y+QNG EA+G+++ ML
Sbjct: 247 ----------SRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGG 295
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+K + L++ L ACA+ ++ GK+IH ++R + VG +++ Y+K G VE+A
Sbjct: 296 GIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMA 355
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
R F ++++++++W+AM+ GY +G
Sbjct: 356 S---------------------------------RAFRKIKEKNILSWSAMITGYGMHGR 382
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSN 451
++A+E+F M R G +PN T ++L+ S LD G+ +A G + +
Sbjct: 383 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 442
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ + +AG ++ A + + + + W +++ A H E A +R+ EL
Sbjct: 443 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFEL 499
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
GK +H ++++ GL +V++ S+++ Y+K
Sbjct: 319 TGKRIHNQVVRMGLEENVYVGTSIVDMYSKC----------------------------- 349
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
GR+++A F + ++ +SW+ +I Y GR + A+ +F EM + + P T S
Sbjct: 350 --GRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFIS 407
Query: 151 VLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VLA+C+ G L G+ ++ + + G+ V ++++ + G A ++ M++K
Sbjct: 408 VLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVK 467
Query: 210 -NVSSWNVVVS-LHIHSGRLDLARAQFDQMIERD 241
+ + W ++S IH ++LA ++ E D
Sbjct: 468 PDAAIWGALLSACRIHKN-VELAEMSVKRLFELD 500
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/663 (36%), Positives = 391/663 (58%), Gaps = 9/663 (1%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G L H + IK G ++F+ N L+ FYAK ++ A+K+FDEMP + + SWN I++AY K
Sbjct: 430 GLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVK 489
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK-NAIRMFVEM--VQDQVLPTQFTV 148
L A +F+ +D V++ +++ Y ++ A+ F+EM D + +FT+
Sbjct: 490 SQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTL 549
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-R 207
++L L +S GK++HSF++KT V +SL++MY+K G A V+ G
Sbjct: 550 ITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGE 609
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER-DVVTWNSMIAGYSQNGYDFEALGMFA 266
+ + S N +V+ G +D+A F + +E+ DVV WN+MI+G+ QNGY+ E+L +F
Sbjct: 610 VVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFV 669
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M D + ++ T AS LSAC+NL LKLGK++HAY+++ A + + L+ Y K
Sbjct: 670 RM-ADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKC 728
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+ A+ + S + NV + T+++ GY G++ AR++FDSL +++ V WTA+ G
Sbjct: 729 NNMRYAESV--NSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFG 786
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y + + EL +E P+ L +++ + A+L GKQIH+ LR+G
Sbjct: 787 YVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLD 846
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
++++L+ MYSK G+I A R+F + ++++ + MI A HG EA+QLF+ M+
Sbjct: 847 TKLTSSLVDMYSKCGSIIYAERIFREVT-DKDSIIYNIMIAGYAHHGWENEAVQLFKEMV 905
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G KPD IT+V +L+AC HGGLVE G+ +++ M N + I P H+A M+DL GRA L
Sbjct: 906 KHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQL 965
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+A F+ +P++ D V WG+ L+ACR++ N +L + A ++LL+IE +N Y L N+Y
Sbjct: 966 DKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVY 1025
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G WE+ IRK MK VKK G SWV +++K HVF D H + +AIY+ +A +
Sbjct: 1026 AAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASLT 1085
Query: 687 DEI 689
DE+
Sbjct: 1086 DEL 1088
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 243/510 (47%), Gaps = 71/510 (13%)
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
L G H +K+G + + ++N L+ YAK G A+ +FD M +NV SWN +++
Sbjct: 427 LKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAA 486
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEALGMFANM-LKDSSLKPDK 278
++ S L ARA FD + +D+VT+NSM++GY++ +GY +ALG F M ++ D+
Sbjct: 487 YVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDE 546
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
FTL + L+ A L + GKQ+H+++++T D T ++LI Y+K G + A ++
Sbjct: 547 FTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYG 606
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIF-DSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
G ++ ++ ++ + G+I A +F L DVVAW M+ G+ QNG ++++
Sbjct: 607 CG-EVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESL 665
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
+LF M E N +T +++LS S+L SL GK++HA L++ ++ + + L+ +Y
Sbjct: 666 KLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVY 725
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF--------------- 502
K N+ A V + + Q S TSMIV + G EA +LF
Sbjct: 726 CKCNNMRYAESVNSELRM-QNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALF 784
Query: 503 ---------ERMLEL-------GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
E + EL PD + + ++ AC + G++ ++ M I
Sbjct: 785 FGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRA-GI 843
Query: 547 KPTPSHFASMVDLLGRAGLL-------------------------------QEAYNFIEN 575
K +S+VD+ + G + EA +
Sbjct: 844 KLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKE 903
Query: 576 M---PLEPDVVAWGSLLSACRVHKNLDLGK 602
M +PD + + +LLSACR ++LG+
Sbjct: 904 MVKHGFKPDAITFVALLSACRHGGLVELGE 933
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 174/356 (48%), Gaps = 44/356 (12%)
Query: 22 SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS 81
SNL+S +GK VHA ++K L + F+ + L++ Y K ++ YA+ V E+ ++ + S
Sbjct: 691 SNLRSLK--LGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVNSELRMQNVYS 748
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+++ Y+ QG + A ++F+ + ++SV WT + Y ++ + + + E ++
Sbjct: 749 ITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLSEYRKEAK 808
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+P + S++ +C L GK++HS++++ G+ +T+SL++MY+K G + A+
Sbjct: 809 VPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAER 868
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F ++ ++D + +N MIAGY+ +G++ EA
Sbjct: 869 IF-------------------------------REVTDKDSIIYNIMIAGYAHHGWENEA 897
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI-----HAYIIRTEFDATGPVG 316
+ +F M+K KPD T + LSAC + ++LG+ + Y I E D
Sbjct: 898 VQLFKEMVKH-GFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYA--- 953
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+I Y + ++ A + + + I L+ + + L+ G+ AR+ D L
Sbjct: 954 -CMIDLYGRANQLDKALEFMRKIPIQ-LDAVIWGAFLNACRINGNAELARKAEDEL 1007
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 138/272 (50%), Gaps = 39/272 (14%)
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ LK G H I++ F T + N LI+ YAK G + AQK+ ++ + NV ++
Sbjct: 424 MKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDE--MPERNVFSWN 481
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ-NGLNKDAVELFRSMVREGP- 408
++ Y+K ++ AR +FDS +D+V + +ML GY + +G A+ F M + P
Sbjct: 482 AIIAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEM-QTAPD 540
Query: 409 --KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
+ + +TL ML++++ L + +GKQ+H+ L++ ++ +++LI MYSK G A
Sbjct: 541 MIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEA 600
Query: 467 RRVFNL----------------------------IHWRQ----ETVSWTSMIVALAQHGL 494
RV+ + W++ + V+W +MI Q+G
Sbjct: 601 CRVYYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGY 660
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
EE+++LF RM + + + T+ VL+AC++
Sbjct: 661 EEESLKLFVRMADEKVGWNEHTFASVLSACSN 692
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L HG H ++SG ++ +SN LIT Y+K G +N A+++F+ + R SW ++I
Sbjct: 427 LKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERN-VFSWNAIIA 485
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG-GLVEQGQRYYNMMKNVHK- 545
A + +A LF+ + D +TY +L+ G Q ++ M+
Sbjct: 486 AYVKSQNLRQARALFDS----AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDM 541
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I+ +M++L + V+++G L + + DL AA
Sbjct: 542 IRIDEFTLITMLNLTAKLC-----------------VISYGKQLHSFMLKTANDLTVFAA 584
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
L+ + G + C +Y CG+ D+ + R +M
Sbjct: 585 SSLIDMY-SKCGFFKEACRVYYGCGEVVDSVS-RNAM 619
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 333/544 (61%), Gaps = 30/544 (5%)
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
WN +I Y++ AL ++A L+ + D F S L AC + +LGK+IH ++
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQ-LRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 185
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQ----KIVEQSGISYLNVIAFTTLLDGYIKIG 360
++ D VGNAL+ Y + VE A+ K++E+ +S++ T LLD Y K G
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTT--TALLDMYAKCG 243
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
+G AR++F+ L + VV+WTAM+ G ++ ++ +LF M E PN T+
Sbjct: 244 HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM----- 298
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
++ +D ++ AL+ MY+K G+INAA R+F + ++
Sbjct: 299 LNKERVEVD-----------------CILNTALVDMYAKCGDINAAGRLF-IEAISRDIC 340
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
W ++I A HG GEEA+ +F M G+KP+ IT++G+L AC+H GLV +G++ + M
Sbjct: 341 MWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 400
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ + P H+ MVDLLGRAGLL EA+ I++MP++P+ + WG+L++ACR+HKN L
Sbjct: 401 VHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQL 460
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G++AA +LL IEP+N G + N+Y++ +W DAA +RK+MK VG+KK G S +++
Sbjct: 461 GELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNG 520
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
VH F + D HPQ I +A++ ++ E G+VPDT++VL +++E+ KE L +HSEK
Sbjct: 521 TVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEK 580
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+AFGLIST +T +RI+KNLRVCNDCH+A K + K+ R I+VRD RFHHF++G CS
Sbjct: 581 LAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCS 640
Query: 781 CRDY 784
C DY
Sbjct: 641 CGDY 644
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 185/417 (44%), Gaps = 71/417 (17%)
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
S W +I +Y + + +NA+ ++ ++ + F SVL +C + GK++H
Sbjct: 124 SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 183
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW----NVVVSLHIHSG 225
FV+K GL V V N+L+ MY + A+ VFD M ++V SW ++ ++ G
Sbjct: 184 FVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCG 243
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
L LAR F+ + ++ VV+W +MIAG ++ E +F M ++ ++ P++ T+
Sbjct: 244 HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRM-QEENIFPNEITM---- 298
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
L K+ R E D + AL+ YAK
Sbjct: 299 ----------LNKE------RVEVDCI--LNTALVDMYAKC------------------- 321
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
GDI A R+F RD+ W A++ G+ +G ++A+++F M R
Sbjct: 322 --------------GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMER 367
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNIN 464
+G KPN+ T +L S + GK++ + + G + ++ + +AG ++
Sbjct: 368 QGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLD 427
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHG---LGE-EAIQLFERMLELGIKPDHITY 517
A + + + T+ W +++ A H LGE A QL E I+P++ Y
Sbjct: 428 EAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE------IEPENCGY 478
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 58/281 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSW----NTIL 86
+GK +H ++K GL VF+ N+LM Y + + YA+ VFD+M + + SW +L
Sbjct: 177 LGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALL 236
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
YAK G L LA ++FN + + VSWT +I R + ++F+ M ++ + P +
Sbjct: 237 DMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEI 296
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T+ + ++V C+ + +L++MYAK GD A
Sbjct: 297 TMLN-------------KERVE--------VDCI-LNTALVDMYAKCGDINAA------- 327
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
GRL F + I RD+ WN++I G++ +GY EAL +FA
Sbjct: 328 ------------------GRL------FIEAISRDICMWNAIITGFAMHGYGEEALDIFA 363
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M + +KP+ T L AC++ + GK++ ++ T
Sbjct: 364 EM-ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 403
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/584 (37%), Positives = 338/584 (57%), Gaps = 50/584 (8%)
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+ W S+I Y+ +G +L F ML S PD S L +C ++ L+ G+ +H
Sbjct: 71 TLAWKSIIRCYTSHGLFLHSLSFFIQMLA-SGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
IIR NAL++ Y+K +E +Y V D Y K
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVN--------TYKKVFDEGKTSDVYSKKEK 181
Query: 362 ----IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
+G R++F+ + RD+V+W ++ G QNG+++DA+ + R M +P+++TLS+
Sbjct: 182 ESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSS 241
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
+L + + +L GK+IH A+R+G + + + ++LI MY+K ++ + RVF ++ +
Sbjct: 242 VLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP-QH 300
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY-------------------- 517
+ +SW S+I Q+G+ +E ++ F++ML IKP+H+++
Sbjct: 301 DGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLH 360
Query: 518 ----------------VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
+ VLTAC+H GLV++ +Y+N M ++I P H+A++ DLLG
Sbjct: 361 GYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG 420
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L+EAY FI +M +EP W +LL+ACRVHKN++L + ++KL ++P N GAY
Sbjct: 421 RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVL 480
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+YS+ G+W+DA +R +M+ G+KK SW++I+NKVH F D HP D I
Sbjct: 481 LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEA 540
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + ++++ G+V DT VLHDVEE+ K +L HSE+LAI FG+ISTP TT+R+ KN
Sbjct: 541 LKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKN 600
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+A KFI K+V REIVVRD +RFHHFK G CSC D+W
Sbjct: 601 LRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 229/468 (48%), Gaps = 53/468 (11%)
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR-DSVSWTTIIVTYNEIG 124
+A+ + +P +L S TILS Y+ L + +FN +P+ +++W +II Y G
Sbjct: 28 HAQILRTSLPSPSLLS--TILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHG 85
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
F +++ F++M+ P SVL SCT + DL G+ VH +++ G+ + N
Sbjct: 86 LFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCN 145
Query: 185 SLLNMYAK---VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+L+NMY+K + + K VFD + +V S S ++ S R F+ M +RD
Sbjct: 146 ALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS-----LRKVFEMMPKRD 200
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
+V+WN++I+G +QNG +AL M M ++ L+PD FTL+S L A L GK+IH
Sbjct: 201 IVSWNTVISGNAQNGMHEDALMMVREM-GNADLRPDSFTLSSVLPIFAEYVNLLKGKEIH 259
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y IR +DA +G++LI YAK V+
Sbjct: 260 GYAIRNGYDADVFIGSSLIDMYAKCTRVD------------------------------- 288
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ R+F L D ++W +++ G QNG+ + ++ F+ M+ KPN+ + S+++
Sbjct: 289 --DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 346
Query: 422 SSSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L +L GKQ+H +R G + A++T S AG ++ A + FN + +
Sbjct: 347 CAHLTTLHLGKQLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRII 406
Query: 481 S----WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+ ++ L + G EEA +E + ++ I+P + +L AC
Sbjct: 407 PGLEHYAAVADLLGRVGRLEEA---YEFISDMHIEPTGSVWSTLLAAC 451
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 145/296 (48%), Gaps = 40/296 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK---TESISYAKKVFD 72
+ +L+S ++ G+ VH II+ G+ ++ N+LMN Y+K E ++ KKVFD
Sbjct: 109 FPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFD 168
Query: 73 EMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRM 132
E + S S Y R +VF +MP RD VSW T+I + G ++A+ M
Sbjct: 169 EGKTSDVYSKKEKESYYLGSLR-----KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMM 223
Query: 133 FVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK 192
EM + P FT++SVL +L GK++H + ++ G V + +SL++MYAK
Sbjct: 224 VREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAK 283
Query: 193 VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY 252
R+D + F + + D ++WNS+IAG
Sbjct: 284 C-------------------------------TRVDDSCRVFYMLPQHDGISWNSIIAGC 312
Query: 253 SQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
QNG E L F ML + +KP+ + +S + ACA+L L LGKQ+H YIIR E
Sbjct: 313 VQNGMFDEGLKFFQQMLI-AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRME 367
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L SS+ S KQ+HA LR+ S S+ + ++++YS ++ + +FN +
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSP 68
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
T++W S+I HGL ++ F +ML G PDH + VL +CT
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCT 117
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 38/170 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +L S L +A + N GK +H I+ G VF+ +SL++ YAK
Sbjct: 234 PDSFTLSSVLPIFAEYV-------NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTR 286
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ + +VF +P SWN+I++ + G D
Sbjct: 287 VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFD--------------------------- 319
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
++ F +M+ ++ P + +S++ +C L L GK++H ++++
Sbjct: 320 ----EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/651 (35%), Positives = 362/651 (55%), Gaps = 76/651 (11%)
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PTQ T ++ S LS VH +V G + L+NM++++
Sbjct: 67 PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDT------- 119
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+D AR FD+ +R + WN++ + G + L
Sbjct: 120 ------------------------VDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVL 155
Query: 263 GMFA--NMLKDSSLKPDKFTLASTLSACANLEKL----KLGKQIHAYIIRTEFDATGPVG 316
++ NM+ SS D+FT L AC E L + GK+IHA+I+R + A
Sbjct: 156 ELYPRMNMMGVSS---DRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGA----- 207
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
+V TTL+D Y + G + A +FD + ++
Sbjct: 208 ----------------------------HVHVMTTLMDMYARFGCVSYASAVFDEMPVKN 239
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMV--REGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
VV+W+AM+ Y +NG +A+ELFR M+ PN+ T+ ++L ++ A+L+ GK I
Sbjct: 240 VVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLI 299
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA LR G S L V +ALITMY++ G + + + +F+ +H +++ V W S+I + HG
Sbjct: 300 HAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH-KKDVVLWNSLISSYGLHGY 358
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G +AI++FE M++ G P HI+++ VL AC+H GLVE+G++ + M H I+P+ H+A
Sbjct: 359 GRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYA 418
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDLLGRA L EA IE++ +EP WGSLL ACR+H +++L + A+++L +EP
Sbjct: 419 CMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT 478
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L ++Y+ W++ ++K + ++K G SW++++ K++ F D +PQ
Sbjct: 479 NAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQ 538
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+ ++ + + +E+K+ G+ P T VL+D++++ KE+++ HSEKLA+AFGLI+T +
Sbjct: 539 GEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGD 598
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T+RI KNLR+C DCHS KFI K DREI+VRD RFHHFK G+CSC DYW
Sbjct: 599 TIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 221/505 (43%), Gaps = 102/505 (20%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKL-VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+P + LL + RN L VH ++ G FL L+N +++ +++ A+K
Sbjct: 66 NPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARK 125
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFD+ +T+ WN + A A GR + E++ M N +G
Sbjct: 126 VFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRM---------------NMMG----- 165
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTA----LGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
V +FT T +L +C A + L GK++H+ +++ G V+V +
Sbjct: 166 -----------VSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTT 214
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L++MYA+ G A AVFD M +KNV SW
Sbjct: 215 LMDMYARFGCVSYASAVFDEMPVKNVVSW------------------------------- 243
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLK-PDKFTLASTLSACANLEKLKLGKQIHAYI 304
++MIA Y++NG +EAL +F M+ ++ P+ T+ S L ACA L+ GK IHAYI
Sbjct: 244 SAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYI 303
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
+R D+ PV +ALI+ YA+ G +E Q
Sbjct: 304 LRRGLDSILPVISALITMYARCGKLESGQ------------------------------- 332
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
IFD + +DVV W +++ Y +G + A+++F M+ G P++ + ++L S
Sbjct: 333 --LIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390
Query: 425 LASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
++ GK++ S ++ G S+ ++ + +A ++ A ++ + W
Sbjct: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450
Query: 484 SMIVALAQHGLGEEAIQLFERMLEL 508
S++ A H E A + +R+ +L
Sbjct: 451 SLLGACRIHCHVELAERASKRLFKL 475
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/783 (31%), Positives = 417/783 (53%), Gaps = 110/783 (14%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FY LLQ L +R+ ++VH ++K G H + F+ + L+N YAK
Sbjct: 69 FYVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKC------------- 115
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
G ++ A VF+ M R+ V+WTT++V + + + K+AI +F
Sbjct: 116 ------------------GNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQ 157
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM+ P+ +T+++VL +C++L L G + H++++K + +V ++L ++Y+K G
Sbjct: 158 EMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCG 217
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
RL+ A F ++ E++V++W S ++ +
Sbjct: 218 -------------------------------RLEDALKTFSRIREKNVISWTSAVSACAD 246
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG + L +F M+ +KP++FTL S LS C + L+LG Q+++ I+ +++
Sbjct: 247 NGAPVKGLRLFVEMIA-VDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLR 305
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N+L+ YL Y+K G I A R+F+ + D
Sbjct: 306 VRNSLL----------------------YL-----------YLKSGCIVEAHRLFNRMDD 332
Query: 375 RDVVAWTAMLVGYEQ-NGLNKD----------AVELFRSMVREGPKPNNYTLSAMLSVSS 423
+V W AM+ G+ Q L KD A++LF + G KP+ +TLS++LSV S
Sbjct: 333 ASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCS 392
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ +++ G+QIHA +++G S + VS +LI+MYSK G+I A + F + R ++WT
Sbjct: 393 RMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRT-MIAWT 451
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI +QHG+ ++A+ +FE M G++P+ +T+VGVL+AC+H G+V Q Y+ +M+
Sbjct: 452 SMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKK 511
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+KIKP H+ MVD+ R G L++A NFI+ M EP W + ++ C+ H NL+LG
Sbjct: 512 YKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFY 571
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
AAE+LL ++P + Y L N+Y S ++ED + +RK M+ V K + +SW+ I++KV+
Sbjct: 572 AAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVY 631
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF--VPDTASVLHDVEEDVKEQMLRHHSEKL 721
F HPQ I + + ++K +G+ + + EE+ +HSEKL
Sbjct: 632 SFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKL 691
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
AI FGL + P ++ +R++K+ +C D H+ IK++ L REI+V+D+ R H F G CSC
Sbjct: 692 AITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSC 751
Query: 782 RDY 784
++
Sbjct: 752 GNF 754
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 59/287 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN +L S L +L L G V++ IK G ++ ++NSL+ Y K+
Sbjct: 267 PNEFTLTSALSQCCEILSLEL-------GTQVYSLCIKFGYESNLRVRNSLLYLYLKSGC 319
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A ++F+ M ++ +WN +++ +A+ L +D++S
Sbjct: 320 IVEAHRLFNRMDDASMVTWNAMIAGHAQMMEL-----------TKDNLS---------AC 359
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
R A+++F ++ + P FT++SVL+ C+ + + G+++H+ +KTG V V+
Sbjct: 360 HRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVS 419
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
SL++MY+K G ++ A F +M R ++
Sbjct: 420 TSLISMYSKCGS-------------------------------IERASKAFLEMSTRTMI 448
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
W SMI G+SQ+G +AL +F +M + ++P+ T LSAC++
Sbjct: 449 AWTSMITGFSQHGMSQQALHIFEDM-SLAGVRPNAVTFVGVLSACSH 494
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/854 (30%), Positives = 423/854 (49%), Gaps = 135/854 (15%)
Query: 1 METPNPPSLISPLEFYAH--LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNF- 57
++ + S+I L+ +A+ +L+ ++ +P K +H I+K G L +F N L+N
Sbjct: 35 LDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAY 94
Query: 58 ------------------------------YAKTESIS-YAK-----------------K 69
YA + I Y++ K
Sbjct: 95 VKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLK 154
Query: 70 VFDEMPVKTLCSW-----------------NTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+F + +C W +++AY+ G +D A VF + +D V
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W I+ Y E G F++++++ M +P +T + L + LG K VH ++
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
KT V LL +Y ++GD A VF+
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN---------------------------- 306
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
+M + DVV W+ MIA + QNG+ EA+ +F M +++ + P++FTL+S L+ CA +
Sbjct: 307 ---EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNGCAIGK 362
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
LG+Q+H +++ FD V NALI YAK ++
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD---------------------- 400
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
A ++F L ++ V+W ++VGYE G A +FR +R
Sbjct: 401 -----------TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE 449
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
T S+ L +SLAS+D G Q+H A+++ A ++VSN+LI MY+K G+I A+ VFN
Sbjct: 450 VTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE 509
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ + SW ++I + HGLG +A+++ + M + KP+ +T++GVL+ C++ GL++Q
Sbjct: 510 ME-TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQ 568
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
GQ + M H I+P H+ MV LLGR+G L +A IE +P EP V+ W ++LSA
Sbjct: 569 GQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSAS 628
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQG 652
N + + +AE++L I P + Y + N+Y+ +W + A+IRKSMK +GVKK G
Sbjct: 629 MNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPG 688
Query: 653 FSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ 712
SW++ Q VH F V HP I + + + G+VPD +VL D++++ K++
Sbjct: 689 LSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDK 748
Query: 713 MLRHHSEKLAIAFGLISTPEN-TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRF 771
L HSE+LA+A+GL+ P + + IMKNLR+C+DCHSA+K I +V R++V+RD RF
Sbjct: 749 RLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRF 808
Query: 772 HHFKKGLCSCRDYW 785
HHF G+CSC D+W
Sbjct: 809 HHFHAGVCSCGDHW 822
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/782 (31%), Positives = 415/782 (53%), Gaps = 109/782 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FY LLQ L R+ ++VH ++K G H + F+ + L+N YAK
Sbjct: 66 FYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKC------------- 112
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
G ++ A VF MP R+ V+WTT++V + + + K+AI +F
Sbjct: 113 ------------------GNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQ 154
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM+ P+ +T+++VL +C++L L G + H++++K L +V ++L ++Y+K G
Sbjct: 155 EMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCG 214
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
RL+ A F ++ E++V++W S ++
Sbjct: 215 -------------------------------RLEDALKAFSRIREKNVISWTSAVSACGD 243
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG + L +F M+ + +KP++FTL S LS C + L+LG Q+ + I+ +++
Sbjct: 244 NGAPVKGLRLFVEMISED-IKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLR 302
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N+L+ YL Y+K G I A R F+ + D
Sbjct: 303 VRNSLL----------------------YL-----------YLKSGFIVEAHRFFNRMDD 329
Query: 375 RDVVAWTAMLVGYEQN-GLNKD----------AVELFRSMVREGPKPNNYTLSAMLSVSS 423
+V W AM+ G+ Q L KD A+++F + + G KP+ +TLS++LSV S
Sbjct: 330 VSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCS 389
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
+ +++ G+QIHA +++G S + VS +LI+MY+K G+I A + F + R ++WT
Sbjct: 390 RMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRT-MIAWT 448
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI +QHG+ ++A+ +FE M G++P+ +T+VGVL+AC+H G+V Q Y+ +M+
Sbjct: 449 SMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKK 508
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+KIKP H+ MVD+ R G L++A NFI+ M EP W + ++ CR H NL+LG
Sbjct: 509 YKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFY 568
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
A+E+LL ++P + Y L N+Y S +++D + +RK M+ V K + +SW+ I++KV+
Sbjct: 569 ASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVY 628
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR-HHSEKLA 722
F D HP I + + + K +G+ + + D EE+ K +HSEKLA
Sbjct: 629 SFKTNDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLA 688
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
I FGL + P ++ +R++K+ +C D H+ IK + L REI+V+D+ R H F G CSC
Sbjct: 689 ITFGLENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGECSCG 748
Query: 783 DY 784
++
Sbjct: 749 NF 750
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 172/412 (41%), Gaps = 79/412 (19%)
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K+ + + +K L C + + +H ++++T V + L++ YAK G +
Sbjct: 56 KEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNM 115
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E A+++ E + NV+A+TTL +VG+ Q
Sbjct: 116 EDARRVFEN--MPRRNVVAWTTL-------------------------------MVGFVQ 142
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N K A+ +F+ M+ G P+ YTLSA+L SSL SL G Q HA ++ SV
Sbjct: 143 NSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSV 202
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+AL ++YSK G + A + F+ I + +SWTS + A +G + ++LF M+
Sbjct: 203 GSALCSLYSKCGRLEDALKAFSRIR-EKNVISWTSAVSACGDNGAPVKGLRLFVEMISED 261
Query: 510 IKPDHITYVGVLTACTH-----------------------------------GGLVEQGQ 534
IKP+ T L+ C G + +
Sbjct: 262 IKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAH 321
Query: 535 RYYNMMKNVHKI--KPTPSHFASMVDL-------LGRAGLLQEAYNFIENMPLEPDVVAW 585
R++N M +V + + A M++L R + ++ + ++PD+
Sbjct: 322 RFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTL 381
Query: 586 GSLLSACRVHKNLDLG-KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
S+LS C ++ G +I A+ + + ++L ++Y+ CG E A+
Sbjct: 382 SSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERAS 433
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/699 (33%), Positives = 376/699 (53%), Gaps = 68/699 (9%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
Y+K + A V L P R+ VSWT++I + G F A+ F EM ++ V+P FT
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+ +L GK++H+ VK G V V S +MY K RL
Sbjct: 62 PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT-------------RL 108
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
+ D AR FD++ ER++ TWN+ I+ +G EA+ F
Sbjct: 109 R------------------DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 150
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ P+ T + L+AC++ L LG Q+H ++R+ FD V N LI Y K
Sbjct: 151 RRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC-- 207
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
K + S I IF + ++ V+W +++ Y
Sbjct: 208 -----KQIRSSEI--------------------------IFTEMGTKNAVSWCSLVAAYV 236
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
QN ++ A L+ ++ + +++ +S++LS + +A L+ G+ IHA A+++ ++
Sbjct: 237 QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF 296
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
V +AL+ MY K G I + + F+ + + V+ S+I A G + A+ LFE M
Sbjct: 297 VGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 355
Query: 509 GI--KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G P+++T+V +L+AC+ G VE G + ++ M++ + I+P H++ +VD+LGRAG++
Sbjct: 356 GCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMV 415
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+ AY FI+ MP++P + WG+L +ACR+H LG +AAE L ++P +SG + L N +
Sbjct: 416 ERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTF 475
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G+W +A +R+ +K VG+KK G+SW+ ++N+VH F +D H I +AK+
Sbjct: 476 AAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLR 535
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+E++ G+ PD L+D+EE+ K + HHSEKLA+AFGL+S P + +RI KNLR+C
Sbjct: 536 NEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICG 595
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHS KF+ V REI+VRD RFH FK G+CSC+DYW
Sbjct: 596 DCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 203/489 (41%), Gaps = 101/489 (20%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R P GK +HA +KCG L VF+ S + Y KT A+K+FDE+P + L +WN +
Sbjct: 72 RLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFI 131
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
S +SV+ GR + AI F+E + P
Sbjct: 132 S---------------------NSVT----------DGRPREAIEAFIEFRRIDGHPNSI 160
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T + L +C+ L+ G ++H V+++G V+V N L++ Y K ++ +F M
Sbjct: 161 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 220
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
KN V+W S++A Y QN D +A ++
Sbjct: 221 GTKN-------------------------------AVSWCSLVAAYVQNHEDEKASVLYL 249
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
KD D F ++S LSACA + L+LG+ IHA+ ++ + T VG+AL+ Y K
Sbjct: 250 RSRKDIVETSD-FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 308
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +E +++ FD + ++++V +++ G
Sbjct: 309 GCIEDSEQ---------------------------------AFDEMPEKNLVTRNSLIGG 335
Query: 387 YEQNGLNKDAVELFRSMVRE--GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS--G 442
Y G A+ LF M GP PN T ++LS S ++++G +I S +RS G
Sbjct: 336 YAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS-MRSTYG 394
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ ++ M +AG + A + + W ++ A HG + +
Sbjct: 395 IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAA 454
Query: 503 ERMLELGIK 511
E + +L K
Sbjct: 455 ENLFKLDPK 463
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 338/570 (59%), Gaps = 36/570 (6%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++SL +G + AR F + D ++S++ S+ G+ + + + ML + +
Sbjct: 129 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 188
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ +T S + ACA+L L+LGK+IH++++ + + V ALI+ YAK +++A+K
Sbjct: 189 N-YTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKK-- 245
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+FD++ R ++AW +++ GY+QNGL +++
Sbjct: 246 -------------------------------VFDAMPQRTIIAWNSLISGYDQNGLPQES 274
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ LF M+ G +P++ T+ ++LS S L +LD G +H A +G ++ + +LI M
Sbjct: 275 IGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINM 334
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y++ GN++ AR VF+ + R V+WT+MI HG G +A++LF M G +P++IT
Sbjct: 335 YTRCGNVSKAREVFDSMKERN-VVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 393
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN- 575
+V VL+AC H GL++ G+R ++ MK + + P H MVD+ GRAGLL +AY FI+
Sbjct: 394 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 453
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
+P EP W S+L ACR+H+N DLG AE +L +EP+N G Y L N+Y+ G+ +
Sbjct: 454 IPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRV 513
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+R M +KK G+S ++I K ++F + D HPQ + IY + ++ E G+V
Sbjct: 514 EMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYV 573
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
P S++HD+EE+ ++ LR+HSEKLA+AFGL+ T + T+RI+KNLR+C DCHSAIK I
Sbjct: 574 PAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHI 633
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ DREI+VRD RFHHFK G CSC DYW
Sbjct: 634 SIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 234/525 (44%), Gaps = 104/525 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL+S + RN + VHA II GLH S L L++ SI+YA+++F +P
Sbjct: 97 LLRSGPRLRNL---QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVP--- 150
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
N DS + +++ ++ G + + + M+
Sbjct: 151 ----------------------------NPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLF 182
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ +T TSV+ +C L L GK++HS V+ G + V +L+ +YAK D +
Sbjct: 183 SGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKV 242
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
AK VFD M + + +W NS+I+GY QNG
Sbjct: 243 AKKVFDAMPQRTIIAW-------------------------------NSLISGYDQNGLP 271
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E++G+F +++ +S +PD T+ S LS+C+ L L G +H Y FD +G +
Sbjct: 272 QESIGLF-HLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTS 330
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI+ Y + G V A+++ FDS+++R+VV
Sbjct: 331 LINMYTRCGNVSKAREV---------------------------------FDSMKERNVV 357
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
WTAM+ GY +G + A+ELF M GP+PNN T A+LS + +D G+++ +S
Sbjct: 358 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 417
Query: 439 LRS-GEASSLSVSNALITMYSKAGNINAARR-VFNLIHWRQETVSWTSMIVALAQHGLGE 496
+ G + + ++ M+ +AG +N A + + I WTSM+ A H +
Sbjct: 418 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 477
Query: 497 EAIQLFERMLELGIK-PDHITYVGVLTACTHGGLVEQGQRYYNMM 540
+++ E +L + + P H YV + G +++ + NMM
Sbjct: 478 LGVKVAEHVLSVEPENPGH--YVMLSNIYALAGRMDRVEMVRNMM 520
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 184/376 (48%), Gaps = 23/376 (6%)
Query: 280 TLASTLSACANLEKLKLGKQIHAY--IIRTEFDATG--PVGNALISCYAKVGGVEIAQKI 335
T ++ L + K+KL Q A+ + FD PV AL+ ++ ++
Sbjct: 54 TSSAPLDRNPTMNKIKLQTQQLAFQHPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAH 113
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
+ SG+ + T L+ G I ARR+F ++ + D + ++L + G + D
Sbjct: 114 IIVSGLHRSRSL-LTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSID 172
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
V +R M+ G +NYT ++++ + L++L GK+IH+ + G S + V ALI
Sbjct: 173 TVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIA 232
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
+Y+KA ++ A++VF+ + R ++W S+I Q+GL +E+I LF M+E G +PD
Sbjct: 233 LYAKASDMKVAKKVFDAMPQRT-IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSA 291
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMK----NVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
T V +L++C+ G ++ G ++ +++ + T S++++ R G + +A
Sbjct: 292 TIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGT-----SLINMYTRCGNVSKARE 346
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEP----DNSGAYSALCNLYS 627
++M E +VV W +++S +H G+ A E + N+ + A+ + +
Sbjct: 347 VFDSMK-ERNVVTWTAMISGYGMH---GYGRQAMELFTEMRAYGPRPNNITFVAVLSACA 402
Query: 628 SCGKWEDAANIRKSMK 643
G +D + SMK
Sbjct: 403 HSGLIDDGRRVFSSMK 418
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/756 (33%), Positives = 392/756 (51%), Gaps = 100/756 (13%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
+ R +GK VH +K L + L N+LM+ Y+K I+ A+ +
Sbjct: 659 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI-------------- 704
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ--DQVL 142
F + N++ VSW T++ ++ G + +M+ + V
Sbjct: 705 -----------------FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 747
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ T+ + + C L + K++H + +K V N+ + YAK G A+ V
Sbjct: 748 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 807
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F G+R K V+S WN++I G++Q+ +L
Sbjct: 808 FHGIRSKTVNS-------------------------------WNALIGGHAQSNDPRLSL 836
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
M K S L PD FT+ S LSAC+ L+ L+LGK++H +IIR
Sbjct: 837 DAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN--------------- 880
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+E+ YL+V++ YI G++ + +FD++ D+ +V+W
Sbjct: 881 ------------WLERDLFVYLSVLSL------YIHCGELCTVQALFDAMEDKSLVSWNT 922
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ GY QNG A+ +FR MV G + ++ + S L SL G++ HA AL+
Sbjct: 923 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 982
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ +LI MY+K G+I + +VFN + + T SW +MI+ HGL +EAI+LF
Sbjct: 983 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHGLAKEAIKLF 1041
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
E M G PD +T++GVLTAC H GL+ +G RY + MK+ +KP H+A ++D+LGR
Sbjct: 1042 EEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGR 1101
Query: 563 AGLLQEAYNFI-ENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
AG L +A + E M E DV W SLLS+CR+H+NL++G+ A KL +EP+ Y
Sbjct: 1102 AGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVL 1161
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY+ GKWED +R+ M + ++K G SW+++ KV F V + + I +
Sbjct: 1162 LSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSL 1221
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + +I +MG+ PDT SV HD+ E+ K + LR HSEKLA+ +GLI T E TT+R+ KN
Sbjct: 1222 WSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKN 1281
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
LR+C DCH+A K I K+++REIVVRD RFHHFK G
Sbjct: 1282 LRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/566 (22%), Positives = 244/566 (43%), Gaps = 95/566 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G VH ++K GL VF+ N+L++FY ++ A ++FD MP + L SWN+++ ++
Sbjct: 560 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 619
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G + E F L+ ++ N G F +P T+ +
Sbjct: 620 DNG---FSEESFLLLGE---------MMEENGDGAF---------------MPDVATLVT 652
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL C ++ GK VH + VK L + + N+L++MY+K G A+ +F KN
Sbjct: 653 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V S WN+M+ G+S G + ML
Sbjct: 713 VVS-------------------------------WNTMVGGFSAEGDTHGTFDVLRQMLA 741
Query: 271 DSS-LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+K D+ T+ + + C + L K++H Y ++ EF V NA ++ YAK G +
Sbjct: 742 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 801
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
AQ R+F +R + V +W A++ G+ Q
Sbjct: 802 SYAQ---------------------------------RVFHGIRSKTVNSWNALIGGHAQ 828
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+ + +++ M G P+++T+ ++LS S L SL GK++H +R+ L V
Sbjct: 829 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 888
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+++++Y G + + +F+ + + VSW ++I Q+G + A+ +F +M+ G
Sbjct: 889 YLSVLSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 947
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I+ I+ + V AC+ + G+ + H ++ S++D+ + G + ++
Sbjct: 948 IQLCGISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQS 1006
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVH 595
+ E +W +++ +H
Sbjct: 1007 SKVFNGLK-EKSTASWNAMIMGYGIH 1031
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 208/452 (46%), Gaps = 71/452 (15%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
LC+ I++ YA G D + VF+ + +++ W +I +Y+ + + F+EM+
Sbjct: 477 LCT--RIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 534
Query: 139 D-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+LP FT V+ +C + D+ G VH VVKTGL V V N+L++ Y G
Sbjct: 535 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 594
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A +FD M +N+ S WNSMI +S NG+
Sbjct: 595 DALQLFDIMPERNLVS-------------------------------WNSMIRVFSDNGF 623
Query: 258 DFEALGMFANMLK---DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
E+ + M++ D + PD TL + L CA ++ LGK +H + ++ D
Sbjct: 624 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 683
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ NAL+ Y+K G + AQ I + + + NV+++ T++ G+ GD FD LR
Sbjct: 684 LNNALMDMYSKCGCITNAQMIFKMN--NNKNVVSWNTMVGGFSAEGD---THGTFDVLRQ 738
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
ML G E + D V + ++ P + S + S+ K++
Sbjct: 739 --------MLAGGED--VKADEVTILNAV------PVCFHESFLPSL----------KEL 772
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHG 493
H +L+ + V+NA + Y+K G+++ A+RVF+ I R +TV SW ++I AQ
Sbjct: 773 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSN 830
Query: 494 LGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
++ +M G+ PD T +L+AC+
Sbjct: 831 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 177/422 (41%), Gaps = 76/422 (18%)
Query: 117 IVTYNEIGRFKNAIRMFVEMV------QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
I + E G + R E V D L + + +L + D+ G+K+H
Sbjct: 405 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 464
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
V SG + N D+++ + ++++ G D +
Sbjct: 465 V-----SGSTRLRN----------DDVLCTRI---------------ITMYAMCGSPDDS 494
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD + +++ WN++I+ YS+N E L F M+ + L PD FT + ACA
Sbjct: 495 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 554
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+ + +G +H +++T VGNAL+S Y G F
Sbjct: 555 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG---------------------FV 593
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK- 409
T A ++FD + +R++V+W +M+ + NG ++++ L M+ E
Sbjct: 594 T------------DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 641
Query: 410 ---PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P+ TL +L V + + GK +H A++ L ++NAL+ MYSK G I A
Sbjct: 642 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 701
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG--IKPDHITYVGVLTAC 524
+ +F + + + VSW +M+ + G + +ML G +K D +T + + C
Sbjct: 702 QMIFKMNN-NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 760
Query: 525 TH 526
H
Sbjct: 761 FH 762
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 132/287 (45%), Gaps = 23/287 (8%)
Query: 319 LISCYAKVGGVEIAQKIVEQ-SGISYL--NVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
L+ K +E+ +KI + SG + L + + T ++ Y G +R +FD+LR +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
++ W A++ Y +N L + +E F M+ P+++T ++ + ++ + G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +++G + V NAL++ Y G + A ++F+++ R VSW SMI + +G
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN-LVSWNSMIRVFSDNGF 623
Query: 495 GEEAIQLFERMLEL----GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH------ 544
EE+ L M+E PD T V VL C +R + K VH
Sbjct: 624 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR-------EREIGLGKGVHGWAVKL 676
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++ +++D+ + G + A I M +VV+W +++
Sbjct: 677 RLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 722
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 14/378 (3%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV----FDEM 74
L+ + +S +P + H ++ GL F SL++ +K +S+ K+V
Sbjct: 822 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 881
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
+ L + ++LS Y G L +F+ M ++ VSW T+I Y + G A+ +F
Sbjct: 882 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 941
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+MV + ++ V +C+ L L G++ H++ +K L + SL++MYAK G
Sbjct: 942 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 1001
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNSMIA 250
+ VF+G++ K+ +SWN ++ + G A F++M D +T+ ++
Sbjct: 1002 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 1061
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
+ +G E L M LKP+ A + +L ++ A + E D
Sbjct: 1062 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 1121
Query: 311 ATGPVGNALISCYAKVG---GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
G + L SC G ++A K+ E N + + L G K D+ R+
Sbjct: 1122 -VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 1180
Query: 368 IFD--SLRDRDVVAWTAM 383
+ SLR +W +
Sbjct: 1181 RMNEMSLRKDAGCSWIEL 1198
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 371/659 (56%), Gaps = 40/659 (6%)
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
D+V+ V GR ++A+R V F+ + +C AL L +++H
Sbjct: 76 DTVATKDEFVRLCATGRLRDALRRPFRGVLWSDAARLFS--HLFRACRALRPL---RQLH 130
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+F +G + N L+ YA +GD A+ +F+ + +NV SWN++ +I +G L
Sbjct: 131 AFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLG 190
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
AR FD+M ER+V TWN+M+AG + G+D E+LG F +M ++ + PD+F L S C
Sbjct: 191 GARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREG-MHPDEFGLGSVFRCC 249
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIA 348
A L + G+Q+HAY++R+ D VG++L Y + G ++ + ++
Sbjct: 250 AGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL------------ 297
Query: 349 FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP 408
R+ SL +V+ ++ G QNG ++ A+E F M G
Sbjct: 298 ------------------RMLPSL---SIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGV 336
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
+ T + +S S LA+L G+QIH +++G + V L+ MYS+ G + + R
Sbjct: 337 AADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSER 396
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
VF + +T ++MI A HG G++AI+LF++M+ G +P +T++ +L AC+H G
Sbjct: 397 VF-FGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSG 455
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L E+G + +M + ++P+ H+ +VDLLGR+G L EA I +MPL PD V W +L
Sbjct: 456 LKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTL 515
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC+ KN D+ + A++++ ++P +S +Y L N+ ++ +W D + +RK+M+ V+
Sbjct: 516 LSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVR 575
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G SWV+++ +H F D HP++ I + ++ +I++ G+ PD + VLHD+E++
Sbjct: 576 KEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDE 635
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
KE L HHSEKLAIAF +S PE +R+MKNLRVC+DCH AIK + ++ REIVVRD
Sbjct: 636 EKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRD 694
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 225/505 (44%), Gaps = 70/505 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
++HL ++ ++ P + +HA G F N LM YA ++ A+++F+ +
Sbjct: 112 LFSHLFRA-CRALRPL--RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERI 168
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + SWN + Y K G L A ++F+ MP R+ +W ++ +G + ++ F+
Sbjct: 169 PRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFL 228
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
+M ++ + P +F + SV C L D+ G++VH++VV++GL + V +SL +MY + G
Sbjct: 229 DMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 288
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+AV ++ SL I V+ N++IAG +Q
Sbjct: 289 CLQEGEAVL-----------RMLPSLSI--------------------VSCNTIIAGRTQ 317
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG AL F M++ + D T S +S+C++L L G+QIH +++ D P
Sbjct: 318 NGDSEGALEYFC-MMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 376
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V T L+ Y + G +G + R+F
Sbjct: 377 V---------------------------------MTCLVHMYSRCGCLGDSERVFFGYCG 403
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
D +AM+ Y +G + A+ELF+ M+ G +P++ T A+L S + G
Sbjct: 404 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 463
Query: 435 HASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ G S+ ++ + ++G ++ A + + + V W +++ A
Sbjct: 464 FELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQK 523
Query: 494 LGEEAIQLFERMLELGIKPDHITYV 518
+ A ++ +R++EL D +YV
Sbjct: 524 NFDMAERIAKRVIELDPH-DSASYV 547
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 348/562 (61%), Gaps = 5/562 (0%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYD-FEALGMFANMLKDSSLKPDKFTLASTL 285
L A FDQ+ + D+ +N+MI +S + + +L +F ++ +D L P++++
Sbjct: 63 LSYAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAF 122
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
SAC N ++ G+Q+ + ++ + V NALI Y K G V +QK+ + + +
Sbjct: 123 SACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDR--D 180
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
+ ++ TL+ Y+ G++ A+ +FD +R+RDVV+W+ ++ GY Q G +A++ F M++
Sbjct: 181 LYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQ 240
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
GPKPN YTL + L+ S+L +LD GK IHA + + + ++I MY+K G I +
Sbjct: 241 IGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIES 300
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A RVF +Q+ W +MI A HG+ EAI +FE+M I P+ +T++ +L AC+
Sbjct: 301 ASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACS 360
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
HG +VE+G+ Y+ +M + + I P H+ MVDLL R+GLL+EA + I +MP+ PDV W
Sbjct: 361 HGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIW 420
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR-KSMKY 644
G+LL+ACR++K+++ G + ++P++ G + L N+YS+ G+W +A +R K+
Sbjct: 421 GALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEIS 480
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
KK G S ++++ H F V D HPQ IY+ + ++ ++K G+VP+ +LHD
Sbjct: 481 RDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLHD 540
Query: 705 V-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
+ +E+ KE L HSEKLAIAFGL++T T +RI+KNLRVC DCH A KFI K+ +R I
Sbjct: 541 IDDEEDKETALSVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRVI 600
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRD TR+HHF+ G+CSC+DYW
Sbjct: 601 IVRDRTRYHHFEDGICSCKDYW 622
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 227/486 (46%), Gaps = 70/486 (14%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K HA++I L N L+ A S+SYA K+FD++P L +NT++ A++
Sbjct: 33 KQTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIPQPDLFIYNTMIKAHS-- 89
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSV 151
L P+ N++ +F + QD + P +++
Sbjct: 90 -----------LSPH-----------------SCHNSLIVFRSLTQDLGLFPNRYSFVFA 121
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
++C + G++V VK GL V V N+L+ MY K G ++ VF +++
Sbjct: 122 FSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDL 181
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SWN +++ ++ SG + LA+ FD M ERDVV+W+++IAGY Q G EAL F ML+
Sbjct: 182 YSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQI 241
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
KP+++TL S L+AC+NL L GK IHAYI + E + ++I YAK G +E
Sbjct: 242 GP-KPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIES 300
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A ++ F+ + V W AM+ G+ +G
Sbjct: 301 ASRV--------------------------------FFEHKVKQKVWLWNAMIGGFAMHG 328
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ +A+ +F M E PN T A+L+ S ++ GK ++ + S A + + +
Sbjct: 329 MPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGK-LYFRLMVSDYAITPEIEH 387
Query: 452 --ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
++ + S++G + A + + + + W +++ A + E ++ R+++ G
Sbjct: 388 YGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRI-GRIIK-G 445
Query: 510 IKPDHI 515
+ P+HI
Sbjct: 446 MDPNHI 451
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 145/287 (50%), Gaps = 36/287 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ V +K GL +VF+ N+L+ Y K + ++KVF + L SWNT+++AY
Sbjct: 134 GEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVG 193
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + LA E+F+ M RD VSW+TII Y ++G F A+ F +M+Q P ++T+ S
Sbjct: 194 SGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSA 253
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
LA+C+ L L GK +H+++ K + + S+++MYAK G+ A VF
Sbjct: 254 LAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVF-------- 305
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
F+ +++ V WN+MI G++ +G EA+ +F M K
Sbjct: 306 ----------------------FEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQM-KV 342
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGK-----QIHAYIIRTEFDATG 313
+ P+K T + L+AC++ ++ GK + Y I E + G
Sbjct: 343 EKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYG 389
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 338/570 (59%), Gaps = 36/570 (6%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++SL +G + AR F + D ++S++ S+ G+ + + + ML + +
Sbjct: 65 LISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQS 124
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
+ +T S + ACA+L L+LGK+IH++++ + + V ALI+ YAK +++A+K
Sbjct: 125 N-YTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKK-- 181
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+FD++ R ++AW +++ GY+QNGL +++
Sbjct: 182 -------------------------------VFDAMPQRTIIAWNSLISGYDQNGLPQES 210
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
+ LF M+ G +P++ T+ ++LS S L +LD G +H A +G ++ + +LI M
Sbjct: 211 IGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINM 270
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHIT 516
Y++ GN++ AR VF+ + R V+WT+MI HG G +A++LF M G +P++IT
Sbjct: 271 YTRCGNVSKAREVFDSMKERN-VVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 329
Query: 517 YVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN- 575
+V VL+AC H GL++ G+R ++ MK + + P H MVD+ GRAGLL +AY FI+
Sbjct: 330 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 389
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
+P EP W S+L ACR+H+N DLG AE +L +EP+N G Y L N+Y+ G+ +
Sbjct: 390 IPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRV 449
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+R M +KK G+S ++I K ++F + D HPQ + IY + ++ E G+V
Sbjct: 450 EMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYV 509
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
P S++HD+EE+ ++ LR+HSEKLA+AFGL+ T + T+RI+KNLR+C DCHSAIK I
Sbjct: 510 PAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHI 569
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ DREI+VRD RFHHFK G CSC DYW
Sbjct: 570 SIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 234/525 (44%), Gaps = 104/525 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL+S + RN + VHA II GLH S L L++ SI+YA+++F +P
Sbjct: 33 LLRSGPRLRNL---QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVP--- 86
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
N DS + +++ ++ G + + + M+
Sbjct: 87 ----------------------------NPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLF 118
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ +T TSV+ +C L L GK++HS V+ G + V +L+ +YAK D +
Sbjct: 119 SGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKV 178
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
AK VFD M + + +W NS+I+GY QNG
Sbjct: 179 AKKVFDAMPQRTIIAW-------------------------------NSLISGYDQNGLP 207
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E++G+F +++ +S +PD T+ S LS+C+ L L G +H Y FD +G +
Sbjct: 208 QESIGLF-HLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTS 266
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI+ Y + G V A+++ FDS+++R+VV
Sbjct: 267 LINMYTRCGNVSKAREV---------------------------------FDSMKERNVV 293
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
WTAM+ GY +G + A+ELF M GP+PNN T A+LS + +D G+++ +S
Sbjct: 294 TWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSM 353
Query: 439 LRS-GEASSLSVSNALITMYSKAGNINAARR-VFNLIHWRQETVSWTSMIVALAQHGLGE 496
+ G + + ++ M+ +AG +N A + + I WTSM+ A H +
Sbjct: 354 KEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFD 413
Query: 497 EAIQLFERMLELGIK-PDHITYVGVLTACTHGGLVEQGQRYYNMM 540
+++ E +L + + P H YV + G +++ + NMM
Sbjct: 414 LGVKVAEHVLSVEPENPGH--YVMLSNIYALAGRMDRVEMVRNMM 456
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 181/365 (49%), Gaps = 23/365 (6%)
Query: 291 LEKLKLGKQIHAY--IIRTEFD--ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
+ K+KL Q A+ + FD + PV AL+ ++ ++ + SG+
Sbjct: 1 MNKIKLQTQQLAFQHPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRS 60
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+ T L+ G I ARR+F ++ + D + ++L + G + D V +R M+
Sbjct: 61 L-LTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFS 119
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G +NYT ++++ + L++L GK+IH+ + G S + V ALI +Y+KA ++ A
Sbjct: 120 GAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVA 179
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
++VF+ + R ++W S+I Q+GL +E+I LF M+E G +PD T V +L++C+
Sbjct: 180 KKVFDAMPQRT-IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQ 238
Query: 527 GGLVEQGQRYYNMMK----NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
G ++ G ++ +++ + T S++++ R G + +A ++M E +V
Sbjct: 239 LGALDFGCWLHDYADGNGFDLNVVLGT-----SLINMYTRCGNVSKAREVFDSMK-ERNV 292
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEP----DNSGAYSALCNLYSSCGKWEDAANI 638
V W +++S +H G+ A E + N+ + A+ + + G +D +
Sbjct: 293 VTWTAMISGYGMH---GYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV 349
Query: 639 RKSMK 643
SMK
Sbjct: 350 FSSMK 354
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/610 (37%), Positives = 357/610 (58%), Gaps = 45/610 (7%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N ++ ++ G + AR FD++ R +V WNSMIA Y +NG EA+ ++ M+ D L
Sbjct: 115 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 174
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP-VGNALISCYAKVGGVEIAQ 333
PD+FT +S A ++L + G++ H + + VG+AL+ YAK G + A+
Sbjct: 175 -PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 233
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV---------------- 377
+ +Q + +V+ FT L+ GY G+ G + ++F ++ + +
Sbjct: 234 LVSDQ--VVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGN 291
Query: 378 ----------------------VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
V WT+++VG QNG + A+ FR M+R PN++TL
Sbjct: 292 LEDLTSGRLIHGLIVKAGLESAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTL 351
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
S++L SSLA L+ GKQIHA ++ G V ALI Y K G+ AR VFN +
Sbjct: 352 SSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL-L 410
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
+ VS SMI + AQ+G G EA+QLF M + G++P+++T++GVL+AC + GL+E+G
Sbjct: 411 EVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCH 470
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++ +N I+ T H+A MVDLLGRAG L+EA I + + DVV W +LLSACR+H
Sbjct: 471 IFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWRTLLSACRIH 529
Query: 596 KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSW 655
++++ K +++ + P++ G + L NLY+S G W ++ +M+ + +KK SW
Sbjct: 530 GDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSW 589
Query: 656 VQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLR 715
V ++ ++H F DW HP I K+ ++ +++KE+G+VPDT VL D++E+ K + L
Sbjct: 590 VDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLY 649
Query: 716 HHSEKLAIAFGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
+HSEKLA+AF L S +NTT+RI+KNLRVC DCH+ +KF+ K+V R+I+ RD RFHHF
Sbjct: 650 YHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHF 709
Query: 775 KKGLCSCRDY 784
+ GLCSC DY
Sbjct: 710 RNGLCSCGDY 719
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 247/545 (45%), Gaps = 110/545 (20%)
Query: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
N S L+ Y+ L+Q + ++ + + +K G H S L N L++ Y K S+
Sbjct: 70 NGASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSV 127
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
YA+KVFDE+P + + +WN+++++Y + G
Sbjct: 128 VYARKVFDEVPHRHIVAWNSMIASYIRN-------------------------------G 156
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH--SFVVKTGLSGCVNV 182
R K AI ++ MV D +LP +FT +SV + + LG + G++ H S V+ G+S V V
Sbjct: 157 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSN-VFV 215
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
++L++MYAK G A+ V D + K+V + ++ + H G + F M ++ +
Sbjct: 216 GSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGI 275
Query: 243 --------------------------------------VTWNSMIAGYSQNGYDFEALGM 264
VTW S+I G QNG + AL
Sbjct: 276 EANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVTWTSVIVGLVQNGREEIALLK 335
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F ML+ SS+ P+ FTL+S L AC++L L+ GKQIHA +++ D VG ALI Y
Sbjct: 336 FRQMLR-SSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYG 394
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G EI AR +F+ L + DVV+ +M+
Sbjct: 395 KCGSTEI---------------------------------ARSVFNGLLEVDVVSVNSMI 421
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y QNG +A++LF M G +PNN T +LS ++ L+ G I +SA SG
Sbjct: 422 YSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNI 481
Query: 445 SSLSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
A ++ + +AG + A + N ++ + V W +++ A HG E A ++
Sbjct: 482 ELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMN 540
Query: 504 RMLEL 508
R+++L
Sbjct: 541 RVIDL 545
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/562 (39%), Positives = 340/562 (60%), Gaps = 4/562 (0%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
SG L AR FD++ + WN+MI GYS + EAL ++ +ML S + + +T
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHS-VPHNAYTFPF 123
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L AC+++ L+ +QIHA+II+ F + N+L++ Y+K G ++ A+ + +Q +
Sbjct: 124 LLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQ--VDQ 181
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+ +++ +++DGY K G+I A IF+ + +R++++WT+M+ G G K+A+ LF M
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM 241
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
G K +N L + L + L LD GK IHA + + LI MY+K G++
Sbjct: 242 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDL 301
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A VF + + +V WT+MI A HG G EA++ F +M G++P+ +T+ G+LTA
Sbjct: 302 EEAIEVFRKMEEKGVSV-WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLV + + + M+ +H KP+ H+ MVDLLGRAGLL+EA IENMP++P+
Sbjct: 361 CSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAA 420
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
WG+LL+AC +H NL+LGK + L+ ++P + G Y L +++++ G+W AA +R+ MK
Sbjct: 421 IWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMK 480
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
GV K G S + + H F D HPQ I + + +I + ++E G+ P +L
Sbjct: 481 EQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLL 540
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
D+E+ KE + HHSEKLA+ FGLIST T+RI+KNLRVC DCH+ IK I K+ REI
Sbjct: 541 DLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREI 600
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
++RD TRFH FK G C+C DYW
Sbjct: 601 LMRDRTRFHLFKDGNCTCGDYW 622
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 218/474 (45%), Gaps = 42/474 (8%)
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
+ DE+P L ++ A G L A VF+ + ++ W T+I Y+ + A
Sbjct: 47 ILDEIPASKLLAF----CASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEA 102
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ ++ M+ V +T +L +C+++ L +++H+ ++K G + TNSLLN+
Sbjct: 103 LLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNV 162
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y+K GD A+ +FD + ++ SWN ++ + G +++A F+ M ER++++W SMI
Sbjct: 163 YSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMI 222
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
+G G EAL +F M + + +K D L STL ACA+L L GK IHAYI + E
Sbjct: 223 SGCVGAGKPKEALNLFHRM-QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEI 281
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+ +G LI YAK G D+ A +F
Sbjct: 282 EIDPILGCVLIDMYAKCG---------------------------------DLEEAIEVF 308
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ ++ V WTAM+ GY +G ++A+E F M G +PN T + +L+ S +
Sbjct: 309 RKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVH 368
Query: 430 HGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
K + S R G S+ ++ + +AG + A + + + W +++ A
Sbjct: 369 EAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDH-ITYVGVLTACTHGGLVEQGQRYYNMMK 541
HG E Q+ + +++ + P H Y+ + + G Q R MK
Sbjct: 429 CHIHGNLELGKQIGKILIQ--VDPGHGGRYIHLASIHAAAGEWNQAARVRRQMK 480
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 50/354 (14%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA IIK G ++ NSL+N Y+K+ I A+ +FD++ + SWN+++ Y K G
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+++A E+FN MP R+ +SWT++I G+ K A+ +F M + + S L +
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 155 CTALGDLSAGKKVHSFVVKTGLS-----GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
C LG L GK +H+++ K + GCV L++MYAK GD A VF M K
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCV-----LIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMF 265
VS W ++S + GR A F +M +E + +T+ ++ S G EA +F
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 266 ANM--------------------------------LKDSSLKPDKFTLASTLSACANLEK 293
+M +++ +KP+ + L+AC
Sbjct: 375 ESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN 434
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI---VEQSGISYL 344
L+LGKQI +I+ + G + L S +A G A ++ +++ G+S L
Sbjct: 435 LELGKQIGKILIQVDPGHGGRYIH-LASIHAAAGEWNQAARVRRQMKEQGVSKL 487
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 47/219 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I K + + L L++ YAK + A +VF +M K + W ++S YA
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR R+++ W F++M V P Q T T +
Sbjct: 329 HGR------------GREALEW-------------------FMKMQTAGVEPNQMTFTGI 357
Query: 152 LASCTALGDLSAGK-------KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
L +C+ G + K ++H F GC ++++ + G A+ + +
Sbjct: 358 LTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC------MVDLLGRAGLLKEAEELIE 411
Query: 205 GMRLK-NVSSWNVVV-SLHIHSGRLDLARAQFDQMIERD 241
M +K N + W ++ + HIH G L+L + +I+ D
Sbjct: 412 NMPVKPNAAIWGALLNACHIH-GNLELGKQIGKILIQVD 449
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/784 (31%), Positives = 405/784 (51%), Gaps = 102/784 (13%)
Query: 7 PSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESIS 65
P+ + + ++ + SR+P +G+ HAR ++ L F+ L+N Y+K + +
Sbjct: 3 PAAAADPQLLGAAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPA 62
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
A P T+ S+ +S A+ R LA
Sbjct: 63 AAASALASDPNPTVVSFTAFISGAAQHAR-PLA--------------------------- 94
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVL--ASCTALGDLSAGKKVHSFVVKTG-LSGCVNV 182
A+ F M++ + P FT S A+C + G ++H+ ++ G L G V
Sbjct: 95 ---ALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFV 151
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ + ++MY K +G L LAR F++M R+V
Sbjct: 152 SCAAMDMYFK-------------------------------TGCLGLARRLFEEMPNRNV 180
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
+ WN+++ +G E + L+++ P+ ++ + +ACA L LG+Q H
Sbjct: 181 IAWNAVMTNAVIDGRPLETFKAYFG-LREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHG 239
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+++ FD V NA++ D Y K
Sbjct: 240 FVVTCGFDMDVSVSNAMV---------------------------------DFYGKCRCA 266
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
G AR +FD +R R+ V+W +M+V Y Q+G +DA+ ++ G +P ++ +S++L+
Sbjct: 267 GKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTC 326
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ L L+ G+ +HA A+RS +++ V++AL+ MY K G + A +VF L + V+W
Sbjct: 327 AGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVF-LDMPERNLVTW 385
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
+MI A G + A+ +F+ M+ G P+HIT V V+TAC+ GGL + G ++ M+
Sbjct: 386 NAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMR 445
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
++P H+A +VDLLGRAG+ + AY I+ MP+ P + WG+LL AC++H +LG
Sbjct: 446 ERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELG 505
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
+IA+EKL ++P +SG + L N+ +S G+W +A ++RK MK VG+KK G SW+ +N
Sbjct: 506 RIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNV 565
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
VHVF +D H + I +AK+ +++ G++PDT L+DVEE+ KE + HSEKL
Sbjct: 566 VHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKL 625
Query: 722 AIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
A+AFGLI P + +RI KNLR+C DCH A KF+ +V REI+VRD RFH+FK+ CSC
Sbjct: 626 ALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSC 685
Query: 782 RDYW 785
+DYW
Sbjct: 686 KDYW 689
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/732 (33%), Positives = 398/732 (54%), Gaps = 29/732 (3%)
Query: 55 MNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWT 114
M Y++ + AK +FD++P + SWN++++ +++ G + A E+F MP S SW
Sbjct: 1 MQVYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWN 60
Query: 115 TIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT 174
++I Y + G A MF + V+ +T S + + G +
Sbjct: 61 SMITGYAQSGDLAGATAMFDRTPEHNVISWNALITGY--SDNRMIPEAKGVIFDEMPRRE 118
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+S N+LL+ YA+ G +A++ F+ M +V +W ++++ +G+L+ A +
Sbjct: 119 EVS-----WNALLSAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEAEVLY 173
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
D + ERD+V W ++I Y NG E+ ++A L P++ ++ T A +
Sbjct: 174 DLIPERDLVAWTALIQAYGVNGQLTESKRVYA-------LMPERNRVSHTAMIIAYSQN- 225
Query: 295 KLGKQIHAY-IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
G+ + A ++ T D ++I YA+ G ++ A+++ + I +VIA ++
Sbjct: 226 --GEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDS--IKNPDVIACNAMM 281
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
+ Y + A+ +FDS++ + +V+W M+ Y Q G +A +F S+ P N
Sbjct: 282 EAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSI----PHKNVV 337
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
+ + M+ + L ++I S + A++ M ++ G + A+ +F +
Sbjct: 338 SHNVMVVAYAHNMDLAEARRI----FYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKM 393
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+R VSW S+I +A G G A++ M G KPDHIT++G+L AC+H GLVE+G
Sbjct: 394 PYRN-VVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEG 452
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
++ M+ H + P H+ MVD+LGRAG L A +E MP PDV AWGSLL +C+
Sbjct: 453 WTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCK 512
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
H ++ LG AAE LL + +SG Y L N+YSS G+ DA +R MK GVKK G
Sbjct: 513 THSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGV 572
Query: 654 SWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQM 713
S +++ +H F + HP+ I ++++++ + +K+ G+ PDT +VLH V ++ KE +
Sbjct: 573 SLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSVLDEEKEVL 632
Query: 714 LRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHH 773
L +HSEKLAIAF I+ T +RIMKNLRVC+DCH+A KF+ KL+ REI+VRD RFH+
Sbjct: 633 LSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGYRFHN 692
Query: 774 FKKGLCSCRDYW 785
F+ G CSC DYW
Sbjct: 693 FENGTCSCGDYW 704
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 213/490 (43%), Gaps = 83/490 (16%)
Query: 52 NSLMNFYAKTESISYAKKV-FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS 110
N+L+ Y+ I AK V FDEMP + SWN +LSAYA+ G + LA F MP D
Sbjct: 91 NALITGYSDNRMIPEAKGVIFDEMPRREEVSWNALLSAYAQAGHVHLARSTFERMPRHDV 150
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV--TSVLASCTALGDLSAGKKVH 168
V+WT +I + G+ + A E++ D ++P + V T+++ + G L+ K+V+
Sbjct: 151 VAWTALIAVSGQNGQLEEA-----EVLYD-LIPERDLVAWTALIQAYGVNGQLTESKRVY 204
Query: 169 SF------------VVKTGLSGCV---------------NVTNSLLNMYAKVGDEMMAKA 201
+ ++ +G V + S++ YA+ G A+
Sbjct: 205 ALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDARE 264
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+FD ++ +V + N ++ + + LD A+A FD + ++ +V+WN+M+A Y+Q G EA
Sbjct: 265 MFDSIKNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEA 324
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+F ++ P K ++ + A + L + + E D A+++
Sbjct: 325 KSIFDSI-------PHKNVVSHNVMVVAYAHNMDLAEARRIFYSMDEKDTV--TWTAMVA 375
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
A+ G + AQ++ + + Y NV V+W
Sbjct: 376 MLAQHGRLAEAQELFAK--MPYRNV-------------------------------VSWN 402
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+++ G G AV M EG KP++ T +L S + ++ G H ++++
Sbjct: 403 SLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEG-WTHFTSMQ- 460
Query: 442 GEASSLSVSN---ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
G+ + ++ + +AG + AAR + + + + +W S++ + H +
Sbjct: 461 GDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSDVKLG 520
Query: 499 IQLFERMLEL 508
+ E +L+
Sbjct: 521 TRAAESLLQF 530
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 143/314 (45%), Gaps = 33/314 (10%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
N++M Y+ + + +AK +FD + KTL SWNT+++AYA+ G LD A +F+ +P+++ V
Sbjct: 278 NAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVV 337
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
S ++V Y A R+F M + + T T+++A G L+ +++ +
Sbjct: 338 SHNVMVVAYAHNMDLAEARRIFYSMDEKDTV----TWTAMVAMLAQHGRLAEAQELFA-- 391
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF-----DGMRLKNVSSWNVVVSLHIHSGR 226
K V+ NSL+ A G M A +G + +++ ++++ H G
Sbjct: 392 -KMPYRNVVS-WNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACS-HVGL 448
Query: 227 LDLARAQFDQMI-ERDVVTWNS----MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
++ F M + ++ W M+ + G LG +L+ PD
Sbjct: 449 VEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAG----QLGAARELLETMPFIPDVGAW 504
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE---------IA 332
S L +C +KLG + +++ + ++GP L + Y+ VG V A
Sbjct: 505 GSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPY-VLLANMYSSVGRVADALAVRNRMKA 563
Query: 333 QKIVEQSGISYLNV 346
+ + +Q G+S + V
Sbjct: 564 RGVKKQPGVSLIRV 577
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/527 (40%), Positives = 332/527 (62%), Gaps = 4/527 (0%)
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
++ +F +M++ S P+++T AC N + G+QI + I+ ++ V NA+I
Sbjct: 15 SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMI 74
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
YA G V+ A+++ + S ++ ++ ++ GY+ G+IG A+ +FD + +RDVV+W
Sbjct: 75 RMYANWGLVDEARRVFDWSLDQ--DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSW 132
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
T ++ GY Q G K+A++LF M++ GP PN +TL++ L+ ++L +LD G+ IH +
Sbjct: 133 TTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDK 192
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQHGLGEEAI 499
S + + +L+ MY+K G I+ A +VF+ + + V W +MI A HG +EAI
Sbjct: 193 SEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAI 252
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDL 559
LFE+M + P+ +T+V +L AC+HG LVE+G+ Y+ M + + I+P H+ MVDL
Sbjct: 253 DLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDL 312
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAY 619
LGR+GLL+EA + NMP+ PD WG+LL ACR+HK+++ G+ + + ++ D+ G +
Sbjct: 313 LGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCH 372
Query: 620 SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIY 679
L NLYS+ G+W++A +R+ ++ G KKT G S +++ H F V D HPQ +Y
Sbjct: 373 VLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLY 432
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRI 738
+ ++ ++K G+VP+ VL D+ +E+ KE L HSEKLAIAFGLI+TP T +RI
Sbjct: 433 LFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRI 492
Query: 739 MKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+KNLRVC DCH A KFI K+ REI+VRD R+HHFK G CSC+DYW
Sbjct: 493 VKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 200/419 (47%), Gaps = 71/419 (16%)
Query: 128 NAIRMFVEMVQ-DQVLPTQFTVTSVLASC-TALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
N++R+F+ MV+ LP ++T V +C LG L G+++ +K GL + VTN+
Sbjct: 14 NSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLE-GEQIRVHAIKIGLESNLFVTNA 72
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
++ MYA G A+ VFD +++ SWN+++ ++ SG + A+ FD+M ERDVV+W
Sbjct: 73 MIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSW 132
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
++IAGY Q G EAL +F ML+ + P++FTLAS L+ACANL L G+ IH YI
Sbjct: 133 TTIIAGYVQVGCFKEALDLFHEMLQ-TGPPPNEFTLASALAACANLVALDQGRWIHVYID 191
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIV-EQSGISYLNVIAFTTLLDGYIKIGDIGP 364
++E + +L+ YAK G ++ A K+ ++ G+
Sbjct: 192 KSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKL--------------------- 230
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
V W AM+ GY +G +K+A++LF M E PN T A+L+ S
Sbjct: 231 -----------KVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACS- 278
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
HGK + G S++ S + E +
Sbjct: 279 -----HGKLVEEG---RGYFKSMASSYGI----------------------EPEIEHYGC 308
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
M+ L + GL +EA E + + + PD + +L AC +E+GQR ++K +
Sbjct: 309 MVDLLGRSGLLKEAE---ETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKEL 364
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 138/270 (51%), Gaps = 36/270 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ + IK GL ++F+ N+++ YA + A++VFD + L SWN ++ Y
Sbjct: 51 GEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVG 110
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + A E+F+ M RD VSWTTII Y ++G FK A+ +F EM+Q P +FT+ S
Sbjct: 111 SGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASA 170
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD---GMRL 208
LA+C L L G+ +H ++ K+ + + SLL+MYAK G+ A VF G++L
Sbjct: 171 LAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKL 230
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
K V WN+MI GY+ +G EA+ +F M
Sbjct: 231 K--------------------------------VWPWNAMIGGYAMHGKSKEAIDLFEQM 258
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGK 298
K + P+K T + L+AC++ + ++ G+
Sbjct: 259 -KVEKVSPNKVTFVALLNACSHGKLVEEGR 287
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/594 (38%), Positives = 346/594 (58%), Gaps = 46/594 (7%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD++ ER+V+ N MI Y NG+ E + +F M +++PD +T L AC+
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG-CNVRPDHYTFPCVLKACS 151
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ +G++IH + +T VGN L+S Y K G + A+ ++++ +S +V+++
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE--MSRRDVVSW 209
Query: 350 TTLLDGY------------------IKIG-DIG------PA------------RRIFDSL 372
+L+ GY +KI D G PA + +F +
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+ +V+W M+ Y +N + +AVEL+ M +G +P+ +++++L ++L GK
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH R +L + NALI MY+K G + AR VF + R + VSWT+MI A
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISAYGFS 388
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G G +A+ LF ++ + G+ PD I +V L AC+H GL+E+G+ + +M + +KI P H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
A MVDLLGRAG ++EAY FI++M +EP+ WG+LL ACRVH + D+G +AA+KL +
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P+ SG Y L N+Y+ G+WE+ NIR MK G+KK G S V++ +H F V D H
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQ D IY ++ + ++KE+G+VPD+ S LHDVEE+ KE L HSEKLAI F L++T E
Sbjct: 569 PQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKE 628
Query: 733 -----NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
N T+RI KNLR+C DCH A K I ++ REI++RD RFH F+ G+CSC
Sbjct: 629 EEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 682
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/549 (24%), Positives = 222/549 (40%), Gaps = 106/549 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+ VH+RII L + L LM YA + ++ A+KVFDE+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI------------------ 100
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
P R+ + +I +Y G + +++F M V P +T VL
Sbjct: 101 -------------PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C+ G + G+K+H K GLS + V N L++MY K G A+ V D M ++V
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 213 SWNVVVSLHIHSGRLDLA-------------------------------------RAQFD 235
SWN +V + + R D A + F
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+M ++ +V+WN MI Y +N EA+ +++ M D +PD ++ S L AC + L
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALS 326
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
LGK+IH YI R + + NALI YAK G +E
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE------------------------- 361
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
AR +F++++ RDVV+WTAM+ Y +G DAV LF + G P++
Sbjct: 362 --------KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIH 474
L+ S L+ G+ + + L ++ + +AG + A R +
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQG 533
W +++ A H + + +++ +L P+ Y +L+ G E+
Sbjct: 474 MEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA--PEQSGYYVLLSNIYAKAGRWEEV 531
Query: 534 QRYYNMMKN 542
N+MK+
Sbjct: 532 TNIRNIMKS 540
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 44/361 (12%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y + D+ AR++FD + +R+V+ M+ Y NG + V++F +M +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+YT +L S ++ G++IH SA + G +S+L V N L++MY K G ++ AR V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA---CTHGG 528
+ R++ VSW S++V AQ+ ++A+++ M + I D T +L A T
Sbjct: 200 EMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA---YNFIENMPLEPDVVAW 585
++ ++ M K + + M+ + + + EA Y+ +E EPD V+
Sbjct: 259 VMYVKDMFFKMGKK------SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 586 GSLLSACRVHKNLDLGK-----IAAEKL---LLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
S+L AC L LGK I +KL LL+E +AL ++Y+ CG E A +
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE-------NALIDMYAKCGCLEKARD 365
Query: 638 IRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPD 697
+ ++MK V SW + + +G + DA+ ++ ++++ G VPD
Sbjct: 366 VFENMKSRDV-----VSWTAM---ISAYG---FSGRGCDAV-----ALFSKLQDSGLVPD 409
Query: 698 T 698
+
Sbjct: 410 S 410
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 69/305 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H K GL ++F+ N L++ Y K +S A+ V DEM + + SWN+++ YA
Sbjct: 158 IGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 91 KQGRLDLACEV-------------------------------------FNLMPNRDSVSW 113
+ R D A EV F M + VSW
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+I Y + A+ ++ M D P ++TSVL +C LS GKK+H ++ +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
L + + N+L++MYAK G A+ VF+ M+ ++V SW
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW------------------- 378
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+MI+ Y +G +A+ +F+ L+DS L PD +TL+AC++
Sbjct: 379 ------------TAMISAYGFSGRGCDAVALFSK-LQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 294 LKLGK 298
L+ G+
Sbjct: 426 LEEGR 430
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 24 LKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS-- 81
+K+ P +++R+ G S++ T ++S KK+ + K L
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 82 --WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
N ++ YAK G L+ A +VF M +RD VSWT +I Y GR +A+ +F ++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGK 165
++P + LA+C+ G L G+
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGR 430
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/776 (33%), Positives = 402/776 (51%), Gaps = 95/776 (12%)
Query: 20 LQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTL 79
L+ L +R FV L CG H S+ L S+ +A+ E + + ++ V T
Sbjct: 226 LEGLLPNRASFVAILS-----SCGDHSSLPLARSI---HARVEELGF----LGDVVVAT- 272
Query: 80 CSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
+++ Y + G +D + VF M R+ VSW +I + + G A ++ M Q+
Sbjct: 273 ----ALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQE 328
Query: 140 QVLPTQFT-VTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
P + T VT++ A+C++ DL +H ++ GL G V V +L+ MY
Sbjct: 329 GFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGS----- 383
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+G +D ARA FD + +++V+WN+M+ Y NG
Sbjct: 384 --------------------------TGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGR 417
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVG 316
EA+ +FA M K SL P+K + + L C E + + IHA ++ F +
Sbjct: 418 AREAMELFAAM-KRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESSIA 473
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N ++ +A+ G +E A FD+ +D
Sbjct: 474 NGVVRMFARSGSLEEAMAA---------------------------------FDATVVKD 500
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V+W + A+ F +M EG +P+ +TL +++ V + L +L+ G+ I
Sbjct: 501 SVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQ 560
Query: 437 SALRSGEAS-SLSVSNALITMYSKAGN-INAARRVF-NLIHWRQETVSWTSMIVALAQHG 493
+ E + V +A++ M +K G+ ++ R+F + R++ V+W +MI A AQHG
Sbjct: 561 QLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHG 620
Query: 494 LGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP-S 551
G +A++LF M + ++PD T+V VL+ C+H GLVE G + + + V I+ P
Sbjct: 621 HGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVE 680
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
H+A +VD+LGR G L+EA +FI MPL D V W SLL AC + +L+ G+ AA + +
Sbjct: 681 HYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIEL 740
Query: 612 EPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK-TQGFSWVQIQNKVHVFGVEDW 670
+S Y L N+Y++ G+WED+ +R+ M VKK G S + ++N+VH F D
Sbjct: 741 YRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDR 800
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HPQ D IY ++ ++ I+E G+VPDT VLHDVEE+ KEQ+L +HSEKLAIAFGLIS
Sbjct: 801 SHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISV 860
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF-KKGLCSCRDYW 785
P ++R++KNLRVC DCH+A KFI ++ REI VRD RFHHF K G CSC DYW
Sbjct: 861 PHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 139/596 (23%), Positives = 245/596 (41%), Gaps = 110/596 (18%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
P+E A LL+ + + G+ +H +I+K GL + L N L+ Y+K S+ A F
Sbjct: 23 PIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAF 82
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
+ + + +WNT+++A + VF+L R
Sbjct: 83 SALRSRGIATWNTLIAAQSSPA------AVFDLY------------------------TR 112
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGD-------LSAGKKVHSFVVKTGLSGCVNVTN 184
M +E + P + T+ +VL + A GD + + VH + + L + V
Sbjct: 113 MKLEERAEN-RPNRLTIIAVLGA-IASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVAT 170
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
+LL+ Y K G A VF +++ ++ WN + +A A D+ +R
Sbjct: 171 ALLDAYGKCGCVESALEVFSRIQVPDLICWNAAI----------MACAGNDERPDR---- 216
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
AL + M + L P++ + + LS+C + L L + IHA +
Sbjct: 217 ----------------ALLLVRRMWLE-GLLPNRASFVAILSSCGDHSSLPLARSIHARV 259
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
F V AL++ Y + G V+ IA
Sbjct: 260 EELGFLGDVVVATALVTMYGRCGSVD--------------ESIA---------------- 289
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
+F+++ R+ V+W AM+ + Q G A ++ M +EG +PN T L + S
Sbjct: 290 ---VFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACS 346
Query: 425 LASLDHGKQ--IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+S D G+ +H +G + V AL+TMY G I+ AR F+ I + VSW
Sbjct: 347 SSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKN-IVSW 405
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+M+ A +G EA++LF M + P+ ++Y+ VL C V + + + +
Sbjct: 406 NAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVG 462
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
S +V + R+G L+EA + ++ D V+W + ++A ++L
Sbjct: 463 NGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVK-DSVSWNTKVAALSAREDL 517
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 339/570 (59%), Gaps = 33/570 (5%)
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
+VS ++ G A FD+M ++D V+WNS+++G ++ G E L +F M DS LK
Sbjct: 86 LVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKL 145
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
++FT S +SAC + + G +H ++ V NAL++ Y K G VE A ++
Sbjct: 146 NEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLF 205
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
+ S ++ +V+W +++ QNG+ +A
Sbjct: 206 SEMPES-------------------------------EKSIVSWNSIVAVCAQNGMPNEA 234
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITM 456
F M G P++ T+ ++L + + +H G +L++ L+ +
Sbjct: 235 FNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNL 294
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-ELGIKPDHI 515
YSK G +N +R+VF I + + V+WT+M+ A HG G+EAI+ FER++ E G++PDH+
Sbjct: 295 YSKLGRLNNSRKVFEEIS-KPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHV 353
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T+ +L+AC+H GLV++G+ ++ +M +V+K++P H++ MVDLLGR GLL +A+ I+N
Sbjct: 354 TFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKN 413
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EP+ WG+LL ACRVH+N+DLGK AA+ L+ ++P + Y L N+YS+ G W DA
Sbjct: 414 MPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDA 473
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
+ +R MK + + QG S+++ NK+H F V+D+ HP I+ K+ ++ +I+++GFV
Sbjct: 474 SKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFV 533
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFI 755
+T S+LHDV+E+VK M+ HSEK+A+A+GL+ T + L I+KNLR+C DCH+ +KF+
Sbjct: 534 HETESILHDVDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFV 593
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ R I++RD RFH F GLCSC DYW
Sbjct: 594 SMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 214/523 (40%), Gaps = 114/523 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ +++HA +IK + F+ + L++ Y K A +FDEMP K SWN+++S A
Sbjct: 63 ICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLA 122
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP-TQFTVT 149
K IG+ + +F +M D L +FT
Sbjct: 123 K-------------------------------IGQLGECLSVFCKMKSDSELKLNEFTFL 151
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM--R 207
SV+++C + G VH +K GL V V N+L+NMY K G A +F M
Sbjct: 152 SVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPES 211
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K++ SWN S++A +QNG EA F +
Sbjct: 212 EKSIVSWN-------------------------------SIVAVCAQNGMPNEAFNCF-D 239
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M++ + PD T+ S L AC N ++ + +H I D + L++ Y+K+G
Sbjct: 240 MMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLG 299
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ ++K+ E+ IS + +A+T AML GY
Sbjct: 300 RLNNSRKVFEE--ISKPDKVAWT-------------------------------AMLAGY 326
Query: 388 EQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGK---QIHASALRSGE 443
+G K+A+E F +VR EG +P++ T + +LS S + GK ++ + +
Sbjct: 327 AMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKV-- 384
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQ 500
L + ++ + + G ++ A + + + + W +++ A H LG+EA +
Sbjct: 385 QPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAK 444
Query: 501 LFERMLELGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+ + P D Y+ + + GL + +MKN
Sbjct: 445 NL-----IALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKN 482
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/663 (36%), Positives = 390/663 (58%), Gaps = 9/663 (1%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G L H + IK G ++F+ N L+ FYAK ++ A+K+FDEMP + + SWN I++AY K
Sbjct: 430 GLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVK 489
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK-NAIRMFVEM--VQDQVLPTQFTV 148
L A +F+ +D V++ +++ Y ++ A+ F+EM D + +FT+
Sbjct: 490 SHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTL 549
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM-R 207
++L L +S GK++HSF++KT V +SL++MY+K G A V+ G
Sbjct: 550 ITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGE 609
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER-DVVTWNSMIAGYSQNGYDFEALGMFA 266
+ + S N +V+ G +D+A F + +E+ DVV WN+MI+G+ QNGY+ E+L +F
Sbjct: 610 VVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFV 669
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M D + ++ T AS LSAC+NL LKLGK++HAY+++ A + + L+ Y K
Sbjct: 670 RM-ADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKC 728
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+ A+ + S + NV + T+++ GY G++ AR++FDSL +++ WTA+ G
Sbjct: 729 NNMRYAKSV--NSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFG 786
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y + + EL +E P+ L +++ + A+L GKQIH+ LR+G
Sbjct: 787 YVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLD 846
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
++++L+ MYSK G+I A R+F + ++++ + MI A HG EA+QLF+ M+
Sbjct: 847 TKLTSSLVDMYSKCGSIIYAERIFREVT-DKDSIIYNIMIAGYAHHGWENEAVQLFKEMV 905
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
+ G KPD IT+V +L+AC HGGLVE G+ +++ M N + I P H+A M+DL GRA L
Sbjct: 906 KHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQL 965
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+A F+ +P++ D V WG+ L+ACR++ N +L + A ++LL+IE +N Y L N+Y
Sbjct: 966 DKALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVY 1025
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G WE+ IRK MK VKK G SWV +++K HVF D H + +AIY+ +A +
Sbjct: 1026 AAEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASLT 1085
Query: 687 DEI 689
DE+
Sbjct: 1086 DEL 1088
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 244/510 (47%), Gaps = 71/510 (13%)
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
L G H +K+G + + ++N L+ YAK G A+ +FD M +NV SWN +++
Sbjct: 427 LKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAA 486
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGYDFEALGMFANM-LKDSSLKPDK 278
++ S L ARA FD + +D+VT+NSM++GY++ +GY +ALG F M ++ D+
Sbjct: 487 YVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDE 546
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
FTL + L+ A L + GKQ+H+++++T D T ++LI Y+K G + A ++
Sbjct: 547 FTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYG 606
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIF-DSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
G ++ ++ ++ + G+I A +F L DVVAW M+ G+ QNG ++++
Sbjct: 607 CG-EVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESL 665
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
+LF M E N +T +++LS S+L SL GK++HA L++ ++ + + L+ +Y
Sbjct: 666 KLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVY 725
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF--------------- 502
K N+ A+ V + + Q S TSMIV + G EA +LF
Sbjct: 726 CKCNNMRYAKSVNSELRM-QNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALF 784
Query: 503 ---------ERMLEL-------GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
E + EL PD + + ++ AC + G++ ++ M I
Sbjct: 785 FGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRA-GI 843
Query: 547 KPTPSHFASMVDLLGRAGLL-------------------------------QEAYNFIEN 575
K +S+VD+ + G + EA +
Sbjct: 844 KLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKE 903
Query: 576 M---PLEPDVVAWGSLLSACRVHKNLDLGK 602
M +PD + + +LLSACR ++LG+
Sbjct: 904 MVKHGFKPDAITFVALLSACRHGGLVELGE 933
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 173/356 (48%), Gaps = 44/356 (12%)
Query: 22 SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS 81
SNL+S +GK VHA ++K L + F+ + L++ Y K ++ YAK V E+ ++ + S
Sbjct: 691 SNLRSLK--LGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVNSELRMQNVYS 748
Query: 82 WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
+++ Y+ QG + A ++F+ + ++S WT + Y ++ + + + E ++
Sbjct: 749 ITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLSEYRKEAK 808
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
+P + S++ +C L GK++HS++++ G+ +T+SL++MY+K G + A+
Sbjct: 809 VPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAER 868
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+F ++ ++D + +N MIAGY+ +G++ EA
Sbjct: 869 IF-------------------------------REVTDKDSIIYNIMIAGYAHHGWENEA 897
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI-----HAYIIRTEFDATGPVG 316
+ +F M+K KPD T + LSAC + ++LG+ + Y I E D
Sbjct: 898 VQLFKEMVKH-GFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYA--- 953
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
+I Y + ++ A + + + I L+ + + L+ G+ AR+ D L
Sbjct: 954 -CMIDLYGRANQLDKALEFMRKIPIQ-LDAVIWGAFLNACRINGNAELARKAEDEL 1007
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 138/272 (50%), Gaps = 39/272 (14%)
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ LK G H I++ F T + N LI+ YAK G + AQK+ ++ + NV ++
Sbjct: 424 MKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDE--MPERNVFSWN 481
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ-NGLNKDAVELFRSMVREGP- 408
++ Y+K ++ AR +FDS +D+V + +ML GY + +G A+ F M + P
Sbjct: 482 AIIAAYVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEM-QTAPD 540
Query: 409 --KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
+ + +TL ML++++ L + +GKQ+H+ L++ ++ +++LI MYSK G A
Sbjct: 541 MIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEA 600
Query: 467 RRVFNL----------------------------IHWRQ----ETVSWTSMIVALAQHGL 494
RV+ + W++ + V+W +MI Q+G
Sbjct: 601 CRVYYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGY 660
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
EE+++LF RM + + + T+ VL+AC++
Sbjct: 661 EEESLKLFVRMADEKVGWNEHTFASVLSACSN 692
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 26/217 (11%)
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L HG H ++SG ++ +SN LIT Y+K G +N A+++F+ + R SW ++I
Sbjct: 427 LKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERN-VFSWNAIIA 485
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG-GLVEQGQRYYNMMKNVHK- 545
A + +A LF+ + D +TY +L+ G Q ++ M+
Sbjct: 486 AYVKSHNLRQARALFDS----AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDM 541
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
I+ +M++L + V+++G L + + DL AA
Sbjct: 542 IRIDEFTLITMLNLTAKLC-----------------VISYGKQLHSFMLKTANDLTVFAA 584
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
L+ + G + C +Y CG+ D+ + R +M
Sbjct: 585 SSLIDMY-SKCGFFKEACRVYYGCGEVVDSVS-RNAM 619
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/638 (36%), Positives = 363/638 (56%), Gaps = 67/638 (10%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ ++L S T L G ++H+ ++K GL V+++L+N+Y+K + + VFD
Sbjct: 28 ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFD--- 84
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ ++ TW+S+I+ ++QN AL F
Sbjct: 85 ----------------------------ETPKKSSTTWSSVISAFAQNEAPLLALQFFRR 116
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML D ++PD S AC L + +GK +H ++T +
Sbjct: 117 MLNDG-VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGY------------------ 157
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
Y +V ++L+D Y K G+IG AR +FD + +R+VV+W+ M+ GY
Sbjct: 158 ---------------YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGY 202
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q +A+ LF+ + E N++T S+++ V SS L+ GK IH L+ SS
Sbjct: 203 AQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V +ALI++YSK G I A +VF+ I R + W SM++A AQH + LFE M
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGL-WNSMLIACAQHAHTQRVFGLFEEMGN 321
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+G+KP+ I+++ VL AC+H GLVE+G+ Y+++M++ + I+P H+AS+VDLLGRAG LQ
Sbjct: 322 VGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQ 380
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA + I+ MP+ P WG+LL+ CR+HK+ ++ A+++L ++ +SG + L N Y+
Sbjct: 381 EAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYA 440
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G++E+AA +RK ++ GVKK G SWV+ NKVH F D H + IY K+ ++ +
Sbjct: 441 AAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEE 500
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E+++ G+V DT+ VL V+ + K + +R+HSE+LAIAFGLI+ P +R+MKNLRVC D
Sbjct: 501 EMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGD 560
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+AIKF+ K R ++VRD RFH F+ G CSC DYW
Sbjct: 561 CHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 217/525 (41%), Gaps = 97/525 (18%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
+LL S +SR+ G +HA I+K GL + ++L+N Y+KT+ ++ +VFDE P
Sbjct: 30 NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP-- 87
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+ S +W+++I + + A++ F M+
Sbjct: 88 -----------------------------KKSSTTWSSVISAFAQNEAPLLALQFFRRML 118
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
D V P S +C L GK VH VKTG V V +SL++MYAK G+
Sbjct: 119 NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIG 178
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ +FD M +N VV+W+ MI GY+Q
Sbjct: 179 DARHLFDEMPERN-------------------------------VVSWSGMIYGYAQLDD 207
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F L + + + FT +S + C++ L+LGK IH ++ FD++ VG+
Sbjct: 208 GVEALTLFKQALIE-DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS 266
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
ALIS Y+K G +E A ++FD + R++
Sbjct: 267 ALISLYSKCGVIE---------------------------------GAYQVFDEIPTRNL 293
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
W +ML+ Q+ + LF M G KPN + ++L S ++ G++ +
Sbjct: 294 GLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSL 353
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
G +L+ + +AG + A V + R W +++ H E
Sbjct: 354 MRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEM 413
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
A + +R+LE+ + +V + A G E+ R M+++
Sbjct: 414 AAFVADRILEMDSSSSGL-HVLLSNAYAAAGRYEEAARMRKMLRD 457
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 54/369 (14%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R VGK VH +K G + VF+ +SL++ YAK I A+ +FDEMP + + SW+ ++
Sbjct: 140 RRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMI 199
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
YA+ LD E L FK A +++D V F
Sbjct: 200 YGYAQ---LDDGVEALTL---------------------FKQA------LIED-VDVNDF 228
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +SV+ C++ L GK +H +K V ++L+++Y+K G A VFD +
Sbjct: 229 TFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI 288
Query: 207 RLKNVSSWN---VVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDF 259
+N+ WN + + H H+ R+ F++M ++ + +++ S++ S G
Sbjct: 289 PTRNLGLWNSMLIACAQHAHTQRV---FGLFEEMGNVGMKPNFISFLSVLYACSHAGL-V 344
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
E + ++++D ++P+ AS + KL+ + I + T V AL
Sbjct: 345 EKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSV---IKQMPMRPTESVWGAL 401
Query: 320 ISCYAKVGGVE----IAQKIVE-QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
++ E +A +I+E S S L+V+ L + Y G A R+ LRD
Sbjct: 402 LTGCRIHKDTEMAAFVADRILEMDSSSSGLHVL----LSNAYAAAGRYEEAARMRKMLRD 457
Query: 375 RDVVAWTAM 383
R V T +
Sbjct: 458 RGVKKETGL 466
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 145/333 (43%), Gaps = 68/333 (20%)
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY--TLSAMLSVSSSLASLDHGKQIHASA 438
T+ + QN LN+++ E NY + +LS + S SL G Q+HA
Sbjct: 5 TSTAIKPSQNPLNQNSFE------------QNYRQICNLLLSFTRS-RSLRQGLQLHAHI 51
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
L+ G + VS+ LI +YSK + +VF+ ++ + +W+S+I A AQ+ A
Sbjct: 52 LKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP-KKSSTTWSSVISAFAQNEAPLLA 110
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF----- 553
+Q F RML G++PD Y AC G + R ++ K+VH + ++
Sbjct: 111 LQFFRRMLNDGVRPDDHIYPSATKAC---GFL----RRSDVGKSVHCLAVKTGYYCDVFV 163
Query: 554 -ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW--------------------------- 585
+S+VD+ + G + +A + + MP E +VV+W
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222
Query: 586 --------GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG-AYSALCNLYSSCGKWEDAA 636
S++ C L+LGK+ L + D+S SAL +LYS CG E A
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282
Query: 637 NIRKSM--KYVGVKKTQGFSWVQIQNKVHVFGV 667
+ + + +G+ + + Q + VFG+
Sbjct: 283 QVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGL 315
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/626 (35%), Positives = 373/626 (59%), Gaps = 4/626 (0%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+ ++K GLH + F++NSL+N YAK SI A+ +FD P S N ++ YAK
Sbjct: 288 GRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAK 347
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G+LD A ++F++MP++ VS+TT+I+ + F+ A+ +F +M D V+P T+ +V
Sbjct: 348 AGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNV 407
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C+ G++ + +H+ +K + G V V+ +L+ Y A+ +FD M N+
Sbjct: 408 IYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNL 467
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SWNV+++ + +G +D+AR F+++ ++DV++W +MI GY EAL M+ ML+
Sbjct: 468 VSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLR- 526
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S L ++ + + +SAC L + G Q+H +++ FD + +I YA G +++
Sbjct: 527 SGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDL 586
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A E +L ++ L+ G+IK + AR+IFD + +RDV +W+ M+ GY Q
Sbjct: 587 ACLQFEVGAKDHLE--SWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTD 644
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++ A+ELF MV G KPN T+ ++ S ++L +L G+ H + ++
Sbjct: 645 QSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRA 704
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQHGLGEEAIQLFERMLELGI 510
ALI MY+K G+IN+A + FN I + +VS W ++I LA HG + +F M I
Sbjct: 705 ALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNI 764
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ IT++GVL+AC H GLVE G+R + +MK+ + ++P H+ MVDLLGRAGLL+EA
Sbjct: 765 KPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAE 824
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
I +MP++ D+V WG+LL+ACR H ++++G+ AAE L + P + G L N+Y+ G
Sbjct: 825 EMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAG 884
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWV 656
+WED + +R++++ +++ G S V
Sbjct: 885 RWEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 230/464 (49%), Gaps = 39/464 (8%)
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+ + S L C++ S G+++HS V+K GL + NSL+NMYAK G A+ +F
Sbjct: 271 CELALVSALKYCSSS---SQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLF 327
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
D N S N++V + +G+LD AR FD M ++ V++ +MI G QN EAL
Sbjct: 328 DACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALE 387
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F +M D + P+ TL + + AC++ ++ + IHA I+ + V L+ Y
Sbjct: 388 VFKDMRSDGVV-PNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAY 446
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
GV A+++ ++ + +N++++ +L+GY K G + AR +F+ + D+DV++W M
Sbjct: 447 CLCSGVGEARRLFDR--MPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTM 504
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-- 441
+ GY +A+ ++R+M+R G N + ++S L ++ G Q+H ++
Sbjct: 505 IDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGF 564
Query: 442 -----------------------------GEASSLSVSNALITMYSKAGNINAARRVFNL 472
G L NAL++ + K ++ AR++F+
Sbjct: 565 DCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDD 624
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ R + SW++MI AQ A++LF +M+ GIKP+ +T V V +A G +++
Sbjct: 625 MPER-DVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKE 683
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
G+ + + N I + A+++D+ + G + A F +
Sbjct: 684 GRWAHEYICN-ESIPLNDNLRAALIDMYAKCGSINSALQFFNQI 726
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 262/792 (33%), Positives = 410/792 (51%), Gaps = 113/792 (14%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
P+ +L++ L A L P G+ VH +K G + + N L++ YAK
Sbjct: 162 APDEATLVTVLPMCAALAW-------PETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCG 214
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
++ A+ F E P R+ VSW ++ Y
Sbjct: 215 EMADAECAFLEAPPGA----------------------------GRNVVSWNVMLGGYAR 246
Query: 123 IGRFKNAIRMFVEM-VQDQVLPT-QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
G A + EM ++++ +P + T+ SVL C+ L +L+ +++H+FVV+ GL
Sbjct: 247 NGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTG 306
Query: 181 N-VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+ V N+L+ Y + G + A VFDG+ K VSS
Sbjct: 307 DMVPNALIAAYGRCGCLLHACRVFDGICSKMVSS-------------------------- 340
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
WN++I ++QNG A+ +F M KPD F++ S L AC NL+ L GK
Sbjct: 341 -----WNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKA 395
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
H +I+R + S++ V +LL YI+
Sbjct: 396 AHGFILRNGLEKD-----------------------------SFIRV----SLLSVYIQC 422
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV--REGPKPNNYTLSA 417
G AR +FD++ ++D V+W M+ GY QNGL ++++LFR M + G P+ ++
Sbjct: 423 GRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATS 482
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
L S L ++ GK++H AL++ +S+++I MYSK G+++ AR F+ + +
Sbjct: 483 ALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLK-AK 541
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+ VSWT MI A +G G+EA+ L+++M G++PD TY+G+L AC H G++E G ++
Sbjct: 542 DAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFF 601
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
M+N+ KI+ H+A ++ +L RAG +A +E MP EPD S+LSAC +H
Sbjct: 602 QEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGE 661
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
++LGK A+KLL +EP + Y N+Y+ +W++ +RK ++ GV K G SW+
Sbjct: 662 VELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWID 721
Query: 658 IQNKVHVFGVEDWLHPQRDAIYNKMAKIW----DEIKEMGFVPDTASVLHDVEEDVKEQM 713
I KV+ F + P+ +K+ K+W ++I+ G+ PDT +LH++EE+ K +
Sbjct: 722 IAGKVYSFVAGENSLPE----MHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEA 777
Query: 714 LRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHH 773
LR HSEK AIAFGL+ T T +R+ KN+R+C DCH+A K I K+ DREIVVRD RFHH
Sbjct: 778 LRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHH 837
Query: 774 FKKGLCSCRDYW 785
F+ GLCSC DYW
Sbjct: 838 FRDGLCSCGDYW 849
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 237/516 (45%), Gaps = 73/516 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++S Y + GR+D A +VF M R+ VSW ++ + R R +E +
Sbjct: 103 NSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLEDLGGTAA 162
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P + T+ +VL C AL G+ VH VK+G V+N L++MYAK G+ A+
Sbjct: 163 PDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECA 222
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F L G R+VV+WN M+ GY++NG A
Sbjct: 223 F----------------LEAPPG------------AGRNVVSWNVMLGGYARNGEAGAAF 254
Query: 263 GMFANM-LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP-VGNALI 320
G+ M +++ + D+ T+ S L C+ L +L +++HA+++R TG V NALI
Sbjct: 255 GLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALI 314
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ Y + G LL A R+FD + + V +W
Sbjct: 315 AAYGRCG-----------------------CLLH----------ACRVFDGICSKMVSSW 341
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
A++ + QNG A+ELFR M G KP+ +++ ++L +L L HGK H L
Sbjct: 342 NALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFIL 401
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
R+G + +L+++Y + G + AR +F+ + + E VSW +MI +Q+GL E++
Sbjct: 402 RNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDE-VSWNTMIAGYSQNGLPGESL 460
Query: 500 QLFERML--ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--AS 555
QLF M + G P + L AC+ V G+ + K F +S
Sbjct: 461 QLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCF---ALKADLCEDSFLSSS 517
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++D+ + G + +A F + + + D V+W +++
Sbjct: 518 IIDMYSKCGSVDDARVFFDRLKAK-DAVSWTVMITG 552
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 219/489 (44%), Gaps = 82/489 (16%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMV--QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
W ++ + GR +A+ + ++ D V P +FT+ L SC GD G++VH+
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCR--GD--DGRQVHAV 88
Query: 171 VVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
K GL+ G V NSL++MY + G A+ VF+GM +N
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRN------------------- 129
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD--SSLKPDKFTLASTLSA 287
+V+WN+++A + E +F + L+D + PD+ TL + L
Sbjct: 130 ------------LVSWNALMAAVADPRRGLE---LFRDCLEDLGGTAAPDEATLVTVLPM 174
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ-KIVEQSGISYLNV 346
CA L + G+ +H +++ +DA V N L+ YAK G + A+ +E + NV
Sbjct: 175 CAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNV 234
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+++ +L GY + G+ G A F LR+ + E+ G+ D +
Sbjct: 235 VSWNVMLGGYARNGEAGAA---FGLLREMQM----------EERGVPADEI--------- 272
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINA 465
T+ ++L V S L L +++HA +R G + V NALI Y + G +
Sbjct: 273 -------TMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLH 325
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTAC 524
A RVF+ I + + SW ++I A AQ+G AI+LF M G KPD + +L AC
Sbjct: 326 ACRVFDGICSKMVS-SWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLAC 384
Query: 525 THGGLVEQGQRYYNMM--KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+ + G+ + + + K S+ GR L + ++ +E E D
Sbjct: 385 GNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVE----EKDE 440
Query: 583 VAWGSLLSA 591
V+W ++++
Sbjct: 441 VSWNTMIAG 449
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/725 (33%), Positives = 379/725 (52%), Gaps = 50/725 (6%)
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+D+V W + E G + AI F EM V + + VL +C GK
Sbjct: 131 GKDAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARREGKA 190
Query: 167 VHSFVVKTGLSGCVNVTNSLL-NMYAKVGDEMMAKAVF-DGMRLKNVSSWNVVVSLHIHS 224
VH+ +K GL + L MYA+ D A AV +W+ VV+ +
Sbjct: 191 VHAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRL 250
Query: 225 GRLDLARAQFDQMI----ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
G +D A +M E + TWN++++G +++G D EAL + ML + L PD T
Sbjct: 251 GLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRML-EQGLWPDATT 309
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
++S L + AN ++ G ++H + +R G AL+ YAK G ++ A+++ +
Sbjct: 310 VSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDT-- 367
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLN--- 393
+ + N+ + +L+ G+ G A + + ++ D +V W ++ GY NGL+
Sbjct: 368 LEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQA 427
Query: 394 --------------------------------KDAVELFRSMVREGPKPNNYTLSAMLSV 421
+D+ F+ M ++G +P+ T+ +L
Sbjct: 428 MLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRA 487
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ LA L GK++H ALR + V ALI MYSKAG++ +A+R+F I + V
Sbjct: 488 CAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQ-NKNLVC 546
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
+M+ LA HG EAI LF + G+KPD IT+ +LTAC GL+ +G Y++ M+
Sbjct: 547 CNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNME 606
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLG 601
+ + PT ++A MVDLL R+G L EA IE P++P WG+LL+ C +H NLDL
Sbjct: 607 TKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLA 666
Query: 602 KIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNK 661
++AA L +EP NS Y + +LY +++A +++ +MK GV G+SW+QI+
Sbjct: 667 EVAARNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQG 726
Query: 662 VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKL 721
+HVF V+ HP+ I ++ + +IK G+VPDT+ V+++V E+ KE++L H+EKL
Sbjct: 727 IHVFEVDGSPHPETAEICEELMSLVRQIKMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKL 786
Query: 722 AIAFGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
AI +GLI S +R++KN R+C+DCH K I L R+I++RDA RFHHF G CS
Sbjct: 787 AITYGLIHSDASRMPVRVIKNTRMCSDCHEVAKHISALCGRQIILRDAVRFHHFVDGNCS 846
Query: 781 CRDYW 785
C DYW
Sbjct: 847 CNDYW 851
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 229/544 (42%), Gaps = 114/544 (20%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVF-DEMPVKTLCSWNTILSAY 89
GK VHA +K GL + L YA+ ++ A V P +W+ +++
Sbjct: 188 GKAVHAHALKAGLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACC 247
Query: 90 AKQGRLDLACEVFNLM----PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
+ G +D A E+ M P +W ++ GR + A+ + M++ + P
Sbjct: 248 VRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDA 307
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
TV+S+L S G + G +VH F ++ GL +L++MYAK G A+ VFD
Sbjct: 308 TTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDT 367
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEA 261
+ +N+++WN +V+ H ++G+ + A ++M ++ +V TWN +I GYS NG +A
Sbjct: 368 LEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQA 427
Query: 262 L-----------------------------------GMFANMLKDSSLKPDKFTLASTLS 286
+ F M KD ++P T+ L
Sbjct: 428 MLLLRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKD-GVQPSLVTMLVLLR 486
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
ACA L LK GK++H + +R +D VG ALI Y+K
Sbjct: 487 ACAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKA-------------------- 526
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
G + A+RIF ++++++V AML G +G + +A+ LF + R
Sbjct: 527 -------------GSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRS 573
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
G KP++ T +A+L+ S+ + G + M +K G + A
Sbjct: 574 GLKPDSITFTALLTACRSMGLITEGWEY------------------FDNMETKYGVVPTA 615
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT- 525
++ M+ LA+ G +EA+ L ER + P + +LT C+
Sbjct: 616 E-------------NYACMVDLLARSGYLDEAMALIERS---PVDPGASLWGALLTGCSI 659
Query: 526 HGGL 529
HG L
Sbjct: 660 HGNL 663
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 14/302 (4%)
Query: 351 TLLDGYIKIGDIGPARRIFDSLRD----RDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
L D ++G +RR+ + + +D V W + + G +A+ FR M
Sbjct: 104 ALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQVAMLAEAGEWDEAIGAFREMQAR 163
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG--EASSLSVSNALITMYSKAGNIN 464
G + Y L+ +L A+ GK +HA AL++G +A L V L MY++ ++
Sbjct: 164 GVAADGYALARVLHACGRAAARREGKAVHAHALKAGLVDAHPL-VPGFLAGMYAEGADVA 222
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AA V +V+W +++ + GL ++A++L RM G +P T+ VL+ C
Sbjct: 223 AATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGC 282
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ---EAYNFIENMPLEPD 581
G + M + P + +S++ + AG+++ E + F L PD
Sbjct: 283 ARHGRDREALAVLRRMLE-QGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPD 341
Query: 582 VVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
+L+ LD + + L E N +++L ++ G++E A + +
Sbjct: 342 AYTGTALVDMYAKCGRLDCARRVFDTL---EHRNLATWNSLVAGHAYAGQFEAALELVER 398
Query: 642 MK 643
MK
Sbjct: 399 MK 400
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/622 (37%), Positives = 368/622 (59%), Gaps = 67/622 (10%)
Query: 164 GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
G ++H +VVK+GLS V N+L+N Y+K ++ FD
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSK------SQLPFD------------------- 68
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
+R F+ ++ TW+S+I+ ++QN + +L M+ +L+PD L S
Sbjct: 69 ------SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA-GNLRPDDHVLPS 121
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+CA L + +G+ +H ++T +DA VG++L+
Sbjct: 122 ATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLV----------------------- 158
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
D Y K G+I AR++FD + R+VV W+ M+ GY Q G N++A+ LF+
Sbjct: 159 ----------DMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
+ E N+Y+ S+++SV ++ L+ G+QIH +++S SS V ++L+++YSK G
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A +VFN + + + W +M+ A AQH ++ I+LF+RM G+KP+ IT++ VL A
Sbjct: 269 EGAYQVFNEVPVKNLGI-WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLV++G+ Y++ MK +I+PT H+AS+VD+LGRAG LQEA I NMP++P
Sbjct: 328 CSHAGLVDEGRYYFDQMKE-SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
WG+LL++C VHKN +L AA+K+ + P +SG + +L N Y++ G++EDAA RK ++
Sbjct: 387 VWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
G KK G SWV+ +NKVH F + H + IY K+A++ +E+++ G++ DT+ VL
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLR 506
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
+V+ D K Q +R+HSE+LAIAFGLI+ P + +R+MKNLRVC DCH+AIKF+ R I
Sbjct: 507 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVI 566
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRD RFH F+ G CSC DYW
Sbjct: 567 IVRDNNRFHRFEDGKCSCNDYW 588
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 216/491 (43%), Gaps = 96/491 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL S+ ++R+ G +H ++K GL L + N+L+NFY+K++ +++ F++ P K+
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+W++I+S +A+ N +P W ++ +M+
Sbjct: 81 STTWSSIISCFAQ-----------NELP------WMSL--------------EFLKKMMA 109
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ P + S SC L G+ VH +KTG V V +SL++MYAK G+ +
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A+ +FD +M +R+VVTW+ M+ GY+Q G +
Sbjct: 170 ARKMFD-------------------------------EMPQRNVVTWSGMMYGYAQMGEN 198
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
EAL +F L + +L + ++ +S +S CAN L+LG+QIH I++ FD++ VG++
Sbjct: 199 EEALWLFKEALFE-NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L+S Y+K G E A ++ + + L +
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGI-------------------------------- 285
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
W AML Y Q+ + +ELF+ M G KPN T +L+ S +D G+
Sbjct: 286 -WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
S + +L+ M +AG + A V + W +++ + H E A
Sbjct: 345 KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
Query: 499 IQLFERMLELG 509
+++ ELG
Sbjct: 405 AFAADKVFELG 415
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P N + +L S+ S G Q+H ++SG + V+N LI YSK+ +R
Sbjct: 11 PCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSR 70
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
R F ++ + +W+S+I AQ+ L +++ ++M+ ++PD +C
Sbjct: 71 RAFE-DSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAIL 129
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFA------SMVDLLGRAGLLQEAYNFIENMPLEPD 581
+ G ++VH + + A S+VD+ + G + A + MP + +
Sbjct: 130 SRCDIG-------RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRN 181
Query: 582 VVAWGSLL 589
VV W ++
Sbjct: 182 VVTWSGMM 189
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 375/662 (56%), Gaps = 12/662 (1%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++++Y+ + A V +P+ S++++I + F +I +F M ++P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ ++ C L GK++H +GL V S+ +MY + G A+ VFD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
M K+V + + ++ + G L+ +M IE ++V+WN +++G++++GY E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ MF + PD+ T++S L + + E L +G+ IH Y+I+ V +A+I
Sbjct: 236 AVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----D 376
Y K G V + Q + + G + G + A +F+ +++ +
Sbjct: 295 DMYGKSGHVYGIISLFNQ--FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+WT+++ G QNG + +A+ELFR M G KPN+ T+ +ML ++A+L HG+ H
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+R ++ V +ALI MY+K G IN ++ VFN++ + V W S++ + HG +
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN-LVCWNSLMNGFSMHGKAK 471
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
E + +FE ++ +KPD I++ +L+AC GL ++G +Y+ MM + IKP H++ M
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCM 531
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
V+LLGRAG LQEAY+ I+ MP EPD WG+LL++CR+ N+DL +IAAEKL +EP+N
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP 591
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y++ G W + +IR M+ +G+KK G SW+Q++N+V+ D HPQ D
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQID 651
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I KM +I E+++ G P+ LHDVEE +EQML HSEKLA+ FGL++TP+ T L
Sbjct: 652 QITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPL 711
Query: 737 RI 738
++
Sbjct: 712 QV 713
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 222/465 (47%), Gaps = 43/465 (9%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H GL + F++ S+ + Y + + A+KVFD M K + + + +L AYA
Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
++G L+ + + M + + VSW I+ +N G K A+ MF ++ P Q
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
TV+SVL S L+ G+ +H +V+K GL V +++++MY K G ++F+
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQF----DQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+ N ++ +G +D A F +Q +E +VV+W S+IAG +QNG D EAL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + + +KP+ T+ S L AC N+ L G+ H + +R VG+ALI
Sbjct: 374 ELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + ++Q +F+ + +++V W +
Sbjct: 433 YAKCGRINLSQI---------------------------------VFNMMPTKNLVCWNS 459
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRS 441
++ G+ +G K+ + +F S++R KP+ + +++LS + D G K +
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
G L + ++ + +AG + A + + + ++ W +++
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 332/548 (60%), Gaps = 10/548 (1%)
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSS-LKPDKFTLASTLSACANLEKLKLGKQI 300
+ T+NSMI +S++ + ++ +L + L PD +T + A L G +
Sbjct: 74 LFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSV 133
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H ++ F+ V + LI YA++GG++ ++ S I +++ T ++ K+G
Sbjct: 134 HGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVF--SSICEPDLVCQTAMVSACAKMG 191
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D+G AR++FD + +D +AW AM+ GY Q G +++A+ LF M REG K N ++ ++LS
Sbjct: 192 DVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLS 251
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW---RQ 477
S L +LD G+ HA R+ +L++ ALI MY+K GN+N A VF W +
Sbjct: 252 ACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVF----WGMKEK 307
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY 537
+W+S I LA +G GE+ ++LF M + ++P+ IT+V VL C+ GLVE+G++++
Sbjct: 308 NVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHF 367
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
M V+ I+P H+ MVDL GRAG L EA NFI +MP+ P V AWG+LL+AC++++N
Sbjct: 368 ESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRN 427
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQ 657
+++G++A+ K++ +E N GAY L N+Y+ W+ +N+R++M GV+K G S ++
Sbjct: 428 MEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIE 487
Query: 658 IQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHH 717
+ +VH F V D HP+ I + +I +K G+V +T V D+EE+ KE L H
Sbjct: 488 VGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMH 547
Query: 718 SEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKG 777
SEK+AIAFGLIS + +RI+KNLRVC DCH A K I K +REIVVRD RFHHF+ G
Sbjct: 548 SEKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDG 607
Query: 778 LCSCRDYW 785
CSC+ YW
Sbjct: 608 ECSCKGYW 615
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 200/457 (43%), Gaps = 65/457 (14%)
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
++ Y+ +V D TL ++N+++ A++K P+R ++ I+ +
Sbjct: 58 NLHYSNQVLDNSQNPTLFTFNSMIRAHSKSS-----------TPHRSFHFYSRILHSAGY 106
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
+ P +T T ++ + L G VH VK G +V
Sbjct: 107 LA------------------PDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHV 148
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ L+ MYA++G VF + ++ +VS G + AR FD+M +D
Sbjct: 149 QSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDP 208
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
+ WN+MI+GY Q G EAL +F N+++ +K ++ ++ S LSAC++L L G+ HA
Sbjct: 209 IAWNAMISGYVQCGQSREALSLF-NLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHA 267
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
YI R + T +G ALI YAK G++
Sbjct: 268 YIERNKLRMTLTLGTALIDMYAKC---------------------------------GNM 294
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +F +++++V W++ + G NG + +ELF M ++ +PN T ++L
Sbjct: 295 NKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGC 354
Query: 423 SSLASLDHGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S + ++ G++ S + G L ++ +Y +AG+++ A N + R +
Sbjct: 355 SVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGA 414
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
W +++ A + E +++EL K +H YV
Sbjct: 415 WGALLNACKIYRNMEMGELASRKIVELEAK-NHGAYV 450
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 168/374 (44%), Gaps = 75/374 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G VH +K G +++ L+ YA+ + +VF + L ++SA A
Sbjct: 129 TGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACA 188
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G + A ++F+ M ++D ++W +I Y + G+ + A+ +F M ++ V + ++ S
Sbjct: 189 KMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVS 248
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C+ LG L G+ H+++ + L + + +L++MYAK G+ A VF GM+ KN
Sbjct: 249 VLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKN 308
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V TW+S I G + NG + L +F+ ++K
Sbjct: 309 -------------------------------VYTWSSAIGGLAMNGAGEKCLELFS-LMK 336
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S++P++ T S L C+ + ++ G R F++ +KV G+E
Sbjct: 337 QDSVQPNEITFVSVLRGCSVVGLVEEG--------RKHFESM-----------SKVYGIE 377
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAMLVGYEQ 389
+E G ++D Y + G + A +S+ R V AW A+L
Sbjct: 378 ---PRLEHYG----------CMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALL----- 419
Query: 390 NGLNKDAVELFRSM 403
+A +++R+M
Sbjct: 420 -----NACKIYRNM 428
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/638 (36%), Positives = 362/638 (56%), Gaps = 67/638 (10%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ ++L S T L G ++H+ ++K GL V+++L+N+Y+K + + VFD
Sbjct: 28 ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFD--- 84
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ ++ TW+S+I+ ++QN AL F
Sbjct: 85 ----------------------------ETPKKSSTTWSSVISAFAQNEAPLLALQFFRR 116
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML D ++PD S AC L + +GK +H ++T +
Sbjct: 117 MLNDG-VRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGY------------------ 157
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
Y +V ++L+D Y K G+IG AR +FD + +R+VV+W+ M+ GY
Sbjct: 158 ---------------YCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGY 202
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
Q +A+ LF+ + E N++T S+++ V SS L+ GK IH L+ SS
Sbjct: 203 AQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSS 262
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V +ALI++YSK G I A +VF+ I R + W SM++A AQH + LFE M
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDEIPTRNLGL-WNSMLIACAQHAHTQRVFGLFEEMGN 321
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+G+KP+ I ++ VL AC+H GLVE+G+ Y+++M++ + I+P H+AS+VDLLGRAG LQ
Sbjct: 322 VGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQ 380
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA + I+ MP+ P WG+LL+ CR+HK+ ++ A+++L ++ +SG + L N Y+
Sbjct: 381 EAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYA 440
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ G++E+AA +RK ++ GVKK G SWV+ NKVH F D H + IY K+ ++ +
Sbjct: 441 AAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEE 500
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
E+++ G+V DT+ VL V+ + K + +R+HSE+LAIAFGLI+ P +R+MKNLRVC D
Sbjct: 501 EMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGD 560
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+AIKF+ K R ++VRD RFH F+ G CSC DYW
Sbjct: 561 CHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 216/525 (41%), Gaps = 97/525 (18%)
Query: 18 HLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
+LL S +SR+ G +HA I+K GL + ++L+N Y+KT+ ++ +VFDE P
Sbjct: 30 NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP-- 87
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+ S +W+++I + + A++ F M+
Sbjct: 88 -----------------------------KKSSTTWSSVISAFAQNEAPLLALQFFRRML 118
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
D V P S +C L GK VH VKTG V V +SL++MYAK G+
Sbjct: 119 NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIG 178
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ +FD M +N VV+W+ MI GY+Q
Sbjct: 179 DARHLFDEMPERN-------------------------------VVSWSGMIYGYAQLDD 207
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F L + + + FT +S + C++ L+LGK IH ++ FD++ VG+
Sbjct: 208 GVEALTLFKQALIE-DVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGS 266
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
ALIS Y+K G +E A ++FD + R++
Sbjct: 267 ALISLYSKCGVIE---------------------------------GAYQVFDEIPTRNL 293
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
W +ML+ Q+ + LF M G KPN ++L S ++ G++ +
Sbjct: 294 GLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSL 353
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
G +L+ + +AG + A V + R W +++ H E
Sbjct: 354 MRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEM 413
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
A + +R+LE+ + +V + A G E+ R M+++
Sbjct: 414 AAFVADRILEMDSSSSGL-HVLLSNAYAAAGRYEEAARMRKMLRD 457
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 163/369 (44%), Gaps = 54/369 (14%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R VGK VH +K G + VF+ +SL++ YAK I A+ +FDEMP + + SW+ ++
Sbjct: 140 RRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMI 199
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
YA+ LD E L FK A +++D V F
Sbjct: 200 YGYAQ---LDDGVEALTL---------------------FKQA------LIED-VDVNDF 228
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +SV+ C++ L GK +H +K V ++L+++Y+K G A VFD +
Sbjct: 229 TFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEI 288
Query: 207 RLKNVSSWN---VVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDF 259
+N+ WN + + H H+ R+ F++M ++ + + + S++ S G
Sbjct: 289 PTRNLGLWNSMLIACAQHAHTQRV---FGLFEEMGNVGMKPNFIXFLSVLYACSHAGL-V 344
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
E + ++++D ++P+ AS + KL+ + I + T V AL
Sbjct: 345 EKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSV---IKQMPMRPTESVWGAL 401
Query: 320 ISCYAKVGGVE----IAQKIVE-QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
++ E +A +I+E S S L+V+ L + Y G A R+ LRD
Sbjct: 402 LTGCRIHKDTEMAAFVADRILEMDSSSSGLHVL----LSNAYAAAGRYEEAARMRKMLRD 457
Query: 375 RDVVAWTAM 383
R V T +
Sbjct: 458 RGVKKETGL 466
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 145/333 (43%), Gaps = 68/333 (20%)
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY--TLSAMLSVSSSLASLDHGKQIHASA 438
T+ + QN LN+++ E NY + +LS + S SL G Q+HA
Sbjct: 5 TSTAIKPSQNPLNQNSFE------------QNYRQICNLLLSFTRS-RSLRQGLQLHAHI 51
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
L+ G + VS+ LI +YSK + +VF+ ++ + +W+S+I A AQ+ A
Sbjct: 52 LKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP-KKSSTTWSSVISAFAQNEAPLLA 110
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF----- 553
+Q F RML G++PD Y AC G + R ++ K+VH + ++
Sbjct: 111 LQFFRRMLNDGVRPDDHIYPSATKAC---GFL----RRSDVGKSVHCLAVKTGYYCDVFV 163
Query: 554 -ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW--------------------------- 585
+S+VD+ + G + +A + + MP E +VV+W
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222
Query: 586 --------GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG-AYSALCNLYSSCGKWEDAA 636
S++ C L+LGK+ L + D+S SAL +LYS CG E A
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282
Query: 637 NIRKSM--KYVGVKKTQGFSWVQIQNKVHVFGV 667
+ + + +G+ + + Q + VFG+
Sbjct: 283 QVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGL 315
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/578 (36%), Positives = 336/578 (58%), Gaps = 35/578 (6%)
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+N++ N ++ +++ G L+ A+ FD M +R +W+ ++ GY++ G F MF
Sbjct: 82 FRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRE 141
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+L+ S D ++ + AC +L+ LK G+ IH ++ D V L+ YA+
Sbjct: 142 LLR-SGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARC- 199
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
K+VE A +IF + RD+ WT M+
Sbjct: 200 ------KVVED--------------------------AHQIFVKMWKRDLATWTVMIGAL 227
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
++G+ +++ F M +G P+ L ++ + L +++ K IHA +G + +
Sbjct: 228 AESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDV 287
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ A+I MY+K G++ +AR +F+ + R ++W++MI A HG GE+A++LF ML
Sbjct: 288 ILGTAMIDMYAKCGSVESARWIFDRMQVRN-VITWSAMIAAYGYHGQGEKALELFPMMLR 346
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
GI P+ IT+V +L AC+H GL+E+GQR+++ M + + + P H+ MVDLLGRAG L
Sbjct: 347 SGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLD 406
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA IE MP+E D V WG+LL ACR+H++LDL + A LL ++ G Y L N+Y+
Sbjct: 407 EALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYA 466
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
+ GKWED A R M G++K G +W+++ K++ FGV D HP+ + IY + ++ +
Sbjct: 467 NAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGE 526
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+++ G+ PDT VL+DV+E+VK+ +L HSEKLAIAFGL+ P+ +RI KNLRVC D
Sbjct: 527 KLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGD 586
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ KF+ + + I+VRDA RFHHFK+G+CSCRDYW
Sbjct: 587 CHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 195/434 (44%), Gaps = 67/434 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +L Y ++G L+ A E+F+ M R SW+ I+ Y ++G F + MF E+++
Sbjct: 89 NKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAP 148
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
++ V+ +C L DL G+ +H +K GL V +L++MYA+ K V
Sbjct: 149 LDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYAR------CKVV 202
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
D ++ F +M +RD+ TW MI +++G E+L
Sbjct: 203 EDAHQI-------------------------FVKMWKRDLATWTVMIGALAESGVPVESL 237
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F + +++ + PDK L + + ACA L + K IHAYI T + +G A+I
Sbjct: 238 -VFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDM 296
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G VE AR IFD ++ R+V+ W+A
Sbjct: 297 YAKCGSVE---------------------------------SARWIFDRMQVRNVITWSA 323
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-RS 441
M+ Y +G + A+ELF M+R G PN T ++L S ++ G++ +S
Sbjct: 324 MIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEY 383
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + ++ + +AG ++ A + + ++ V W +++ A H + A ++
Sbjct: 384 GVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERV 443
Query: 502 FERMLEL-GIKPDH 514
+L+L KP H
Sbjct: 444 ARSLLKLQSQKPGH 457
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 15/260 (5%)
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
++ N+ LL Y++ G + A+ +FD + R +W+ ++ GY + G +FR
Sbjct: 81 AFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFR 140
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
++R G ++Y+ ++ L L G+ IH L+ G V L+ MY++
Sbjct: 141 ELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCK 200
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
+ A ++F + W+++ +WT MI ALA+ G+ E++ F+RM GI PD + V V+
Sbjct: 201 VVEDAHQIF-VKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVV 259
Query: 522 TACTHGGLVEQGQRYYNMMKNVHK-IKPTPSHF-----ASMVDLLGRAGLLQEAYNFIEN 575
AC G + N K +H I T +M+D+ + G ++ A +
Sbjct: 260 YACAKLGAM-------NKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDR 312
Query: 576 MPLEPDVVAWGSLLSACRVH 595
M + +V+ W ++++A H
Sbjct: 313 MQVR-NVITWSAMIAAYGYH 331
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 35/250 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+L+H +KCGL F+ +L++ YA+ + + A ++F +M W
Sbjct: 170 GRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKM-------WK-------- 214
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
RD +WT +I E G ++ F M ++P + + +V
Sbjct: 215 ----------------RDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTV 258
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C LG ++ K +H+++ TG S V + ++++MYAK G A+ +FD M+++NV
Sbjct: 259 VYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNV 318
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMFAN 267
+W+ +++ + + G+ + A F M+ + +T+ S++ S G E F++
Sbjct: 319 ITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSS 378
Query: 268 MLKDSSLKPD 277
M + + PD
Sbjct: 379 MWDEYGVTPD 388
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 432 KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQ 491
+Q+HA +G +L+V+N L+ MY + G + A+ +F+ + ++ SW+ ++ A+
Sbjct: 70 RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMS-KRHPYSWSVIVGGYAK 128
Query: 492 HGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
G +F +L G D + V+ AC ++ G+ + + K
Sbjct: 129 VGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCI---TLKCGLDYG 185
Query: 552 HF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
HF A++VD+ R ++++A+ M + D+ W ++ A
Sbjct: 186 HFVCATLVDMYARCKVVEDAHQIFVKM-WKRDLATWTVMIGA 226
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/639 (35%), Positives = 362/639 (56%), Gaps = 67/639 (10%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +++++C L + KKV ++++ +GL DE +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDP----------------DEYLR------- 169
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
N V+ +H+ G + AR FD+M E+++++WN++I G G FEA +F
Sbjct: 170 --------NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL 221
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M +D S + + + A A L + G+Q+H+ ++T G G+ ++C
Sbjct: 222 MMWQDFSDAGSRM-FVTMIRASAGLGLIFAGRQLHSCSLKT-----GVGGDVFVAC---- 271
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
L+D Y K G I A+ +FD + ++ V W +++ G
Sbjct: 272 ------------------------ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAG 307
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y +G +++A+ ++ M G K +N+T S ++ + + LASL+H KQ HA +R G
Sbjct: 308 YALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD 367
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ + AL+ +YSK G I A+ VF+++ + +SW ++I HG G EA+++FERML
Sbjct: 368 IVANTALVDLYSKWGRIEDAKHVFDMMP-HKNVISWNALIAGYGNHGRGVEAVEMFERML 426
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G+ P+H+T++ VL+AC++ GL ++G + M HKIKP H+A M++LLGR GLL
Sbjct: 427 HEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLL 486
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EA+ I++ P +P V W +LL+ACRVHKN +LGK AAEKL + P+ Y L N+Y
Sbjct: 487 DEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIY 546
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ G+ E+AA + +++K G++ SW++I+ + + F D H Q IY K+ ++
Sbjct: 547 NRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELM 606
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
EI + G+VP +L DV+E +E++L +HSEKLAIAFGLI+T + T L+I+++ R+C
Sbjct: 607 LEISKHGYVPQDKFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICG 665
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHSAIK I + REIVVRDA+RFHHFK G CSC DYW
Sbjct: 666 DCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 229/545 (42%), Gaps = 134/545 (24%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K V +I GL +L+N ++ + K + A+++FDEMP K + SWNTI+
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDA 210
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G A +F +M W +++ G RMFV M++
Sbjct: 211 GDYFEAFRLFLMM-------WQ----DFSDAGS-----RMFVTMIR-------------- 240
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+ LG + AG+++HS +KTG+ G V V +L++MY+K G A+ VFD M K
Sbjct: 241 -ASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKT-- 297
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
V WNS+IAGY+ +GY EAL M+ M +DS
Sbjct: 298 -----------------------------TVGWNSIIAGYALHGYSEEALSMYYEM-RDS 327
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+K D FT + + CA L L+ KQ HA ++R F AL+ Y+K G +E A
Sbjct: 328 GVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDA 387
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
+ + FD + ++V++W A++ GY +G
Sbjct: 388 KHV---------------------------------FDMMPHKNVISWNALIAGYGNHGR 414
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+AVE+F M+ EG PN+ T A+LS S D G +I S R +
Sbjct: 415 GVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKI-------- 466
Query: 453 LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKP 512
+ + + MI L + GL +EA L + + KP
Sbjct: 467 -----------------------KPRAMHYACMIELLGREGLLDEAFALIK---DAPFKP 500
Query: 513 DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP-SHFASMVDLLGRAGLLQEAYN 571
+ +LTAC E G+ + ++ + P S++ ++++ R+G L+EA
Sbjct: 501 TVNMWAALLTACRVHKNFELGK---FAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAA 557
Query: 572 FIENM 576
I+ +
Sbjct: 558 VIQTL 562
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 164/333 (49%), Gaps = 38/333 (11%)
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EAL +F + + + D T + +SAC L+ ++ K++ Y+I + D + N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ + K G + A+++ ++ + N++++ T++ G + GD A R+F ++
Sbjct: 173 LLMHVKCGMMIDARRLFDE--MPEKNILSWNTIIGGLVDAGDYFEAFRLF-------LMM 223
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W + +F +M+R S+ L + G+Q+H+ +L
Sbjct: 224 W---------QDFSDAGSRMFVTMIR---------------ASAGLGLIFAGRQLHSCSL 259
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
++G + V+ ALI MYSK G+I A+ VF+ + + TV W S+I A HG EEA+
Sbjct: 260 KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP-EKTTVGWNSIIAGYALHGYSEEAL 318
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVD 558
++ M + G+K D+ T+ ++ C +E Q + ++++ + + ++VD
Sbjct: 319 SMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN--TALVD 376
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
L + G +++A + + MP +V++W +L++
Sbjct: 377 LYSKWGRIEDAKHVFDMMP-HKNVISWNALIAG 408
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 154/351 (43%), Gaps = 39/351 (11%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +H+ +K G+ VF+ +L++ Y+K SI
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIE------------------------ 284
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
D C VF+ MP + +V W +II Y G + A+ M+ EM V FT +
Sbjct: 285 ------DAQC-VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFS 337
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C L L K+ H+ +V+ G + +L+++Y+K G AK VFD M K
Sbjct: 338 IIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHK 397
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMF 265
NV SWN +++ + + GR A F++M+ + VT+ ++++ S +G +F
Sbjct: 398 NVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIF 457
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+M +D +KP A + L + L + A I F T + AL++
Sbjct: 458 ESMSRDHKIKPRAMHYACMIEL---LGREGLLDEAFALIKDAPFKPTVNMWAALLTACRV 514
Query: 326 VGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
E+ + E+ G+ + + LL+ Y + G + A + +L+ R
Sbjct: 515 HKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRR 565
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/514 (41%), Positives = 316/514 (61%), Gaps = 11/514 (2%)
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
PD FT + L AC L + GK IH + F + + N +++ Y G + A +
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
E+ + + + + ++ K GDI A F + +++V +WT+M+ G+ Q G +
Sbjct: 68 FEK--MPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
A++LF + E +PN T+ ++L+ + L LD G+ +H + +SG ++ V N LI
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MY K G + ARRVF + R VSW++MI LA HG EEA+ LF M++LG+KP+ +
Sbjct: 186 MYVKCGCLENARRVFYEMEERT-VVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGV 244
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T++G+L AC+H GL+++G+R++ M + + P H+ +VDL RAGLL+EA+ FI +
Sbjct: 245 TFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILS 304
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP++P+ V WG+LL C+VHKN+DL + A + L ++P N G Y + N+Y+ +WEDA
Sbjct: 305 MPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDA 364
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI----KE 691
A +RK MK GVKKT G+S + + VH F D HPQ + I KIWD++ K
Sbjct: 365 ARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDI----CKIWDKLLVKMKR 420
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+ P T+ VL D+EE KE+ L HSEKLA+ FGL++TPE T +RIMKNLRVC DCH+A
Sbjct: 421 RGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAA 480
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+K I +V REI+VRD RFH F+ G CSCRD+W
Sbjct: 481 LKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 176/364 (48%), Gaps = 38/364 (10%)
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
VLP FT + VL +C L D+ GK +H K G + + N +LN+Y G+ A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+F+ M ++ +WN+V++ G +D A F +M ++V +W SMI+G+ Q G E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ +F L+D +++P++ T+ S L+ACA+L L LG+ +H Y ++ F V N LI
Sbjct: 126 AIDLFMK-LEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLI 184
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
Y K G +E ARR+F + +R VV+W
Sbjct: 185 DMYVKCGCLE---------------------------------NARRVFYEMEERTVVSW 211
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+AM+ G +G ++A+ LF M++ G KPN T +L S + +D G++ AS
Sbjct: 212 SAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTA 271
Query: 441 S-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGE 496
G + ++ ++S+AG + A + + V W +++ H L E
Sbjct: 272 DYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAE 331
Query: 497 EAIQ 500
EAI+
Sbjct: 332 EAIK 335
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 186/375 (49%), Gaps = 11/375 (2%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L++ LK + GK +H K G ++FL+N ++N Y + A +F++MP +
Sbjct: 16 VLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRD 75
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+WN +++ AK+G +D A F MPN++ SWT++I + + G+ AI +F+++
Sbjct: 76 AVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLED 135
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ V P + TV SVLA+C LGDL G+ VH + K+G V+V N+L++MY K G
Sbjct: 136 EAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLEN 195
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQ 254
A+ VF M + V SW+ +++ G+ + A F +MI+ V VT+ ++ S
Sbjct: 196 ARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSH 255
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G E FA+M D + P + + L ++ H +I+ G
Sbjct: 256 MGLIDEGRRFFASMTADYGVIPQIEHYGCVVDL---FSRAGLLEEAHEFILSMPIKPNGV 312
Query: 315 VGNALISCYAKVGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V AL+ +++A++ ++ S + LN + + + Y + A R+ ++
Sbjct: 313 VWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMK 372
Query: 374 DRDV---VAWTAMLV 385
DR V W+++ V
Sbjct: 373 DRGVKKTSGWSSITV 387
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/650 (34%), Positives = 353/650 (54%), Gaps = 70/650 (10%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M ++++ T + ++ C G + + VH V G + N+L+NMY K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFG- 65
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
LD AR FD+M +R+VV+W +MI+ YS +
Sbjct: 66 ------------------------------LLDEARNLFDEMPDRNVVSWTTMISAYSNS 95
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+ +AL ML++ ++P+ +T +S L AC L L+ Q+H I++ ++
Sbjct: 96 NLNHKALDFLILMLREG-VRPNMYTYSSVLRACDGLLNLR---QLHGSILKVGLES---- 147
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+V + L+D Y K+G+ A +F+ +
Sbjct: 148 -----------------------------DVFVRSALIDTYSKLGEQHDALNVFNEMITG 178
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V W +++ G+ QN + + L++ M R + TL+++L + LA L+ G+Q+H
Sbjct: 179 DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH 238
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
L+ + L ++NAL+ MY K G++ A +F + ++ +SW++MI LAQ+G
Sbjct: 239 VHVLKYDQ--DLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFS 296
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A++LFE M G KP++IT +GVL AC+H GLV G Y+ MK I P H+
Sbjct: 297 ADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGC 356
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
++DLLGRAG L EA I M EPD V W LL ACRVHKN+DL AA+++L ++P +
Sbjct: 357 IIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPAD 416
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
+G Y L N+Y++ KWED A +R+ M+ GVKK G SW+++ +VH F + D HP+
Sbjct: 417 AGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRI 476
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
+ I +++++ + +G+VPDT VL D+E + E L++HSEKLAI FGL+S P T
Sbjct: 477 EEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKT 536
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ I KNLR+C DCH K + +L +R IV+RD R+HHF+ G+CSC DYW
Sbjct: 537 IHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 210/437 (48%), Gaps = 71/437 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G LD A +F+ MP+R+ VSWTT+I Y+ A+ + M+++ V
Sbjct: 55 NTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVR 114
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +T +SVL +C L +L +++H ++K GL V V ++L++ Y+K+G++ A V
Sbjct: 115 PNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNV 171
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F ++MI D+V WNS+I G++QN E L
Sbjct: 172 F-------------------------------NEMITGDLVVWNSIIGGFAQNSDGDETL 200
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ M K + D+ TL S L AC L L+LG+Q+H ++++ +D + NAL+
Sbjct: 201 HLYKRM-KRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDM 257
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y K G +E A + FT + + ++DV++W+
Sbjct: 258 YCKCGSLEDAN-------------LLFTRM-------------------MTEKDVISWST 285
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS- 441
M+ G QNG + DA++LF +M +GPKPN T+ +L S ++ G S
Sbjct: 286 MIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHF 345
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G +I + +AG ++ A ++ + ++ + V+W ++ A H + AI
Sbjct: 346 GIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYA 405
Query: 502 FERMLELGIKPDHITYV 518
+ +L+L D TY+
Sbjct: 406 AKEILKLD-PADAGTYI 421
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
++ E M + D ITY ++ C G V+Q + + + + + +P ++++
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFS-NGYEPKTFLINTLIN 59
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
+ + GLL EA N + MP + +VV+W +++SA + N +L A + L+L+
Sbjct: 60 MYVKFGLLDEARNLFDEMP-DRNVVSWTTMISA---YSNSNLNHKALDFLILM 108
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/624 (35%), Positives = 368/624 (58%), Gaps = 4/624 (0%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+ I K GLH + F++NSL+N YAK I A+ +FD S N ++S Y +
Sbjct: 72 GRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVR 131
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G++D A ++F++MPN+ VS+TT+I+ + + G F+ A+ +F +M V+P T+ +V
Sbjct: 132 NGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNV 191
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+++C+ LG++ + VH VVK + G V V+ +L++ Y A+ +FD M +N+
Sbjct: 192 ISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNL 251
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+WNV+++ + +G +D AR FD + ++DV++W +MI GY Q G EAL ++ ML+
Sbjct: 252 VTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQ- 310
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ P++ + + +SAC + G Q+H +++ FD + +I YA G +++
Sbjct: 311 TGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDL 370
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A E +L ++ L G+IK G + A + FD + RDV +W+ M+ GY Q+
Sbjct: 371 ACLQFEVGVKDHLE--SWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSE 428
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
K A+ELF M+ G KPN T+ ++ S ++L +L GK H + ++
Sbjct: 429 HPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRA 488
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVS-WTSMIVALAQHGLGEEAIQLFERMLELGI 510
ALI MY+K G+IN+A + FN I +VS W ++I LA HG +++F M I
Sbjct: 489 ALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHI 548
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ IT++GVL+AC H GLVE G+R + MK+ + ++P H+ M+D+LGRAGLL+EA
Sbjct: 549 KPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAE 608
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
I +MP+E D+V WG+LL+ACR H N+++G+ AAE L + P + G L N+Y++ G
Sbjct: 609 EMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAG 668
Query: 631 KWEDAANIRKSMKYVGVKKTQGFS 654
KWE+ + +R M+ + + G+S
Sbjct: 669 KWEEVSFVRSVMQGQTMDREPGYS 692
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 273/537 (50%), Gaps = 46/537 (8%)
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
++ + S L SC++L +S G+++HS + K GL + NSL+NMYAK GD A+ +F
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
DG + S N++VS ++ +G++D AR FD M + V++ +MI G+ QNG+ EAL
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F +M + + P+ TL + +SAC++L ++ + +H +++ V L+ Y
Sbjct: 172 VFKDM-RSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAY 230
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
GV A+++ ++ + N++ + +L+GY K G + AR +FD + D+DV++W M
Sbjct: 231 CLCSGVREARRLFDE--MPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTM 288
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-- 441
+ GY Q G ++A+E++R+M++ G PN + ++S ++ G Q+H + ++
Sbjct: 289 IDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGF 348
Query: 442 -----------------------------GEASSLSVSNALITMYSKAGNINAARRVFNL 472
G L NAL + K G ++ A + F+
Sbjct: 349 DCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDK 408
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+H R + SW++MI AQ + A++LF +ML GIKP+ +T V V +A G +++
Sbjct: 409 MHVR-DVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQE 467
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA-WGSLLS- 590
G+ + M++ I + A+++D+ + G + A F + E V+ W +++
Sbjct: 468 GKLAHEYMRS-ESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICG 526
Query: 591 -ACRVHKNLDLGKIAAEKLLLIEPDN---SGAYSALCNLYSSCGKWEDAANIRKSMK 643
A H ++ L + + I+P+ G SA C+ G E I K+MK
Sbjct: 527 LASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCH----AGLVESGKRIFKTMK 579
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 156/319 (48%), Gaps = 43/319 (13%)
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F N + + L S L +C++L + G+QIH+ I + + N+LI+ Y
Sbjct: 39 IFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMY 98
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
AK G ++ AQ + + G + L+ ++ ++ GY++ G I AR++FD + ++ V++T M
Sbjct: 99 AKCGDIKNAQLLFD--GFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTM 156
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
++G+ QNG ++A+E+F+ M G PN+ TL ++S S L + + + +H ++
Sbjct: 157 IMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFV 216
Query: 444 ASSLSVSNALITMYSKAGNINAARRVF------NLIHWR--------------------- 476
+ VS L+ Y + ARR+F NL+ W
Sbjct: 217 VGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDG 276
Query: 477 ---QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC--------- 524
++ +SW +MI Q G EA++++ ML+ G P+ + V +++AC
Sbjct: 277 ICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDG 336
Query: 525 --THGGLVEQGQRYYNMMK 541
HG +V++G YN ++
Sbjct: 337 WQLHGTVVKRGFDCYNFIQ 355
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/716 (34%), Positives = 399/716 (55%), Gaps = 52/716 (7%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+L R + +V N+ + A+T ++ A+ F+ MP++T S+N +L+ Y +
Sbjct: 2 RLPPVRFLPSSSTPAVVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRN 61
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
D A VF+ MP RD S+ +I + ++ LP
Sbjct: 62 HLPDAALRVFHRMPTRDLASYNALISGLS---------------LRRHTLPD-------- 98
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+ AL + V SF SLL Y + G A +F M +N
Sbjct: 99 -AAAALATIPYPPSVVSF-------------TSLLRGYVRHGLLADAIQLFRQMPERNHI 144
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
S+ V++ + +GR+D AR FD+M +DVV W +M++GY Q G EA +F M K +
Sbjct: 145 SYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRN 204
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYII-RTEFDATGPVGNALISCYAKVGGVEI 331
+ + + +S A ++ L +++ + R E T A++ Y + G +E
Sbjct: 205 VV-----SWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWT-----AMLFGYIQAGRIED 254
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+++ + + + A ++ G+ + G + A+ +FD + +RD W+A++ YEQN
Sbjct: 255 AEELF--NAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNE 312
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+A+ FR M+ G +PN ++ ++L+V ++LA LD+G+++H + LR + +
Sbjct: 313 FLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVS 372
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
ALITMY K GN++ A+RVF++ ++ V W SMI AQHGLGEEA+ +F+ M G+
Sbjct: 373 ALITMYIKCGNLDKAKRVFHMFE-PKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMV 431
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD ITY+G LTAC++ G V++G+ +N M+ IKP H+A MVDLLGRAGL+ EA
Sbjct: 432 PDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALY 491
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I+ MP+EPD V WG+L+ ACR+HKN ++ +I+A+KLL +EP N+G Y L ++Y+S G+
Sbjct: 492 LIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYVLLSHIYTSSGR 551
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL-HPQRDAIYNKMAKIWDEIK 690
WEDA+N+RK + + K+ G SW++ +VH+F D L H + +I + K+ +
Sbjct: 552 WEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFKSGDVLAHQEHASILKMLEKLDGLLM 611
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
E G+ D + VLHD++++ K LR+HSE+ A+A+GL+ PE +R+MKNLRVC
Sbjct: 612 ESGYSADGSFVLHDIDDEQKTHSLRYHSERQAVAYGLLKIPEELPIRVMKNLRVCG 667
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PN PS+IS L A L + G+ VH +++ + ++ ++L+ Y K +
Sbjct: 331 PNYPSVISILTVCAALAVLD-------YGREVHGAMLRRSFDMDIYAVSALITMYIKCGN 383
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFN------LMPNRDSVSWTTII 117
+ AK+VF K + WN++++ YA+ G + A +F+ ++P D +++ +
Sbjct: 384 LDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVP--DGITYIGAL 441
Query: 118 VTYNEIGRFKNAIRMFVEM 136
+ G+ K +F M
Sbjct: 442 TACSYTGKVKEGRDIFNSM 460
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 266/825 (32%), Positives = 415/825 (50%), Gaps = 104/825 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F GKL +++ +K F A+ + Y +++ D L N ++ Y
Sbjct: 93 FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY-EQILDMGFESDLFVGNALVDMY 151
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
++ G L A +VF+ MP RD VSW ++I Y+ G ++ A+ ++ E+ ++P FTV+
Sbjct: 152 SRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVS 211
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL + L + G+ +H F +K+G++ V V N L+ MY K A+ VFD M +
Sbjct: 212 SVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV- 270
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
RD V++N+MI GY + E++ MF L
Sbjct: 271 ------------------------------RDSVSYNTMICGYLKLEMVEESVRMFLENL 300
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
KPD T++S L AC +L L L K I+ Y+++ F V N LI YAK G +
Sbjct: 301 --DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 330 EIAQKIVE------------------QSG---------------------ISYLNVIAFT 350
A+ + QSG I+YL +I+ +
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 351 T-----------------------------LLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
T L+D Y K G++G + +IF S+ D V W
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ + G +++ M + P+ T L + +SLA+ GK+IH LR
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S L + NALI MYSK G + + RVF + R++ V+WT MI A +G GE+A++
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALET 597
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F M + GI PD + ++ ++ AC+H GLV++G + MK +KI P H+A +VDLL
Sbjct: 598 FADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLS 657
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R+ + +A FI+ MP++PD W S+L ACR +++ + + +++ + PD+ G
Sbjct: 658 RSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
N Y++ KW+ + IRKS+K + K G+SW+++ VHVF D PQ +AIY
Sbjct: 718 ASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKS 777
Query: 682 MAKIWDEIKEMGFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ ++ + + G++PD V ++ EE+ K +++ HSE+LAIAFGL++T T L++MK
Sbjct: 778 LEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMK 837
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLRVC DCH K I K+V REI+VRDA RFH FK G CSC+D W
Sbjct: 838 NLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 265/562 (47%), Gaps = 103/562 (18%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM-PVKTLCSWNTILSAYAK 91
+ +HA +I GL S F L++ Y+ + + VF + P K + WN+I+ A
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRA--- 80
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+++ G F A+ + ++ + +V P ++T SV
Sbjct: 81 ----------------------------FSKNGLFPEALEFYGKLRESKVSPDKYTFPSV 112
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ +C L D G V+ ++ G + V N+L++MY+++G A+ VFD M ++++
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
S WNS+I+GYS +GY EAL ++ + LK+
Sbjct: 173 VS-------------------------------WNSLISGYSSHGYYEEALEIY-HELKN 200
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S + PD FT++S L A NL +K G+ +H + +++ ++ V N L++ Y K
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+++ ++ + + +++ T++ GY+K+ + + R+F L + D
Sbjct: 261 ARRVFDEMDVR--DSVSYNTMICGYLKLEMVEESVRMF--LENLDQF------------- 303
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
KP+ T+S++L L L K I+ L++G +V N
Sbjct: 304 -----------------KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
LI +Y+K G++ AR VFN + + +TVSW S+I Q G EA++LF+ M+ + +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
DHITY+ +++ T ++ G+ + N +K+ I + S+ +++D+ + G + ++
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSL 463
Query: 571 NFIENMPLEPDVVAWGSLLSAC 592
+M D V W +++SAC
Sbjct: 464 KIFSSMG-TGDTVTWNTVISAC 484
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 215/445 (48%), Gaps = 73/445 (16%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
++ L+S + L +L +++H+ V+ GL + L++ Y+ + + +VF
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF---- 62
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ VS ++V WNS+I +S+NG EAL +
Sbjct: 63 -RRVSP-------------------------AKNVYLWNSIIRAFSKNGLFPEALEFYGK 96
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
L++S + PDK+T S + ACA L ++G ++ I+ F++ VGNAL+ Y+++G
Sbjct: 97 -LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMG 155
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ A R++FD + RD+V+W +++ GY
Sbjct: 156 LLTRA---------------------------------RQVFDEMPVRDLVSWNSLISGY 182
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
+G ++A+E++ + P+++T+S++L +L + G+ +H AL+SG S +
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
V+N L+ MY K ARRVF+ + R ++VS+ +MI + + EE++++F L+
Sbjct: 243 VVNNGLVAMYLKFRRPTDARRVFDEMDVR-DSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAGLL 566
KPD +T VL AC H + + YN M+K ++ T + ++D+ + G +
Sbjct: 302 -QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDM 358
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSA 591
A + +M + D V+W S++S
Sbjct: 359 ITARDVFNSMECK-DTVSWNSIISG 382
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 203/492 (41%), Gaps = 99/492 (20%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R+ + K ++ ++K G L ++N L++ YAK + A+ VF+ M K SWN+I+
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
S Y + G L A ++F +M M +E D +
Sbjct: 381 SGYIQSGDLMEAMKLFKMM--------------------------MIMEEQADHI----- 409
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +++ T L DL GK +HS +K+G+ ++V+N+L++MYAK G+ + +F M
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+ +WN V+S + G DF
Sbjct: 470 GTGDTVTWNTVISACVRFG--------------------------------DFATGLQVT 497
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++ S + PD T TL CA+L +LGK+IH ++R +++ +GNALI Y+K
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +E + R+F+ + RDVV WT M+
Sbjct: 558 GCLE---------------------------------NSSRVFERMSRRDVVTWTGMIYA 584
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y G + A+E F M + G P++ A++ S +D G +
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 447 LSVSNA-LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ A ++ + S++ I+ A + + + W S++ A G E A ++ R+
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704
Query: 506 LELGIKPDHITY 517
+EL PD Y
Sbjct: 705 IEL--NPDDPGY 714
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 173/399 (43%), Gaps = 75/399 (18%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
++ LS+ +NL +L+ +IHA +I D++ LI Y+ +
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHF-----------REP 55
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
S L+V + PA+ ++ W +++ + +NGL +A+E +
Sbjct: 56 ASSLSVFR------------RVSPAKNVY---------LWNSIIRAFSKNGLFPEALEFY 94
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
+ P+ YT +++ + L + G ++ L G S L V NAL+ MYS+
Sbjct: 95 GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 154
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G + AR+VF+ + R + VSW S+I + HG EEA++++ + I PD T V
Sbjct: 155 GLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKI-----------------KPTPSH----------- 552
L A + +V+QGQ + +PT +
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 553 --FASMVDLLGRAGLLQEAYN-FIENM-PLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
+ +M+ + +++E+ F+EN+ +PD++ S+L AC ++L L K +
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 609 L----LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
L ++E S + L ++Y+ CG A ++ SM+
Sbjct: 334 LKAGFVLE---STVRNILIDVYAKCGDMITARDVFNSME 369
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 248/703 (35%), Positives = 385/703 (54%), Gaps = 73/703 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ YAK G + A +VF+ M D +SW +I + E G + +F+ M+QD+V
Sbjct: 234 NALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQ 293
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+TSV + L D++ K++H VK G + V NSL+ MYA +G MM +A
Sbjct: 294 PNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLG--MMGQA- 350
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
R F +M RD ++W +MI+GY +NG+ +AL
Sbjct: 351 ----------------------------RTVFSRMDTRDAMSWTAMISGYEKNGFPDKAL 382
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++A +++ +++ PD T+AS L+ACA L L +G ++H
Sbjct: 383 EVYA-LMEVNNVSPDDITIASALAACACLGSLDVGVKLH--------------------- 420
Query: 323 YAKVGGVEIAQKIVEQSG-ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
++ E G +SY V+ LL+ Y K I A +F + ++DVV+W+
Sbjct: 421 -----------ELAESKGFMSY--VVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWS 467
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
+M+ G+ N N +A+ FR M+ + KPN+ T A L+ ++ +L GK+IHA LR
Sbjct: 468 SMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRC 526
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G A + NALI +Y K G A F H ++ VSW MI HG GE A+
Sbjct: 527 GIAYEGYLPNALIDLYVKCGQTGYAWAQF-CAHGAKDVVSWNIMIAGFVAHGNGETALSF 585
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M+++G PD +T+V +L AC+ GG+V +G ++ M + + I P H+A MVDLL
Sbjct: 586 FNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLS 645
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L EAYNFI MP+ PD WG+LL+ CR+H++++LG++AA+ +L +EP+++G +
Sbjct: 646 RVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVL 705
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
LC+LY+ G W+ A +RK+M+ G+ G SWV+++ VH F +D HPQ I
Sbjct: 706 LCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTV 765
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDV-KEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
+ I++ +K G P + H E+ V K+ + HSE+LA+AFGLI+T T++ + K
Sbjct: 766 LEGIYERMKASGCAPVES---HSPEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTK 822
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
N C CH +K I +V R+I+VRD+ + HHFK G CSC D
Sbjct: 823 NQYTCQSCHRILKMISYIVRRDIIVRDSKQVHHFKDGSCSCGD 865
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 338/582 (58%), Gaps = 42/582 (7%)
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANML-KDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
V +N +I + + +AL +FA+M + + PD +T L +C+ + L LG QIH
Sbjct: 87 VCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIH 146
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG- 360
+ + + D V ++ IS Y++ G E A ++ + G+ + +V+++ ++ G+ ++G
Sbjct: 147 SAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFD--GMPHRDVVSWNAMIAGFARVGL 204
Query: 361 -------------------------------------DIGPARRIFDSLRDRDVVAWTAM 383
DI RR+FD+++ +++++W AM
Sbjct: 205 FDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAM 264
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
L Y N + AVELF M ++ +P++ TL+ +L L++ GK+IH R
Sbjct: 265 LAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNM 324
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+L + NAL+ MY+ G + AR +F+L+ R + +SWTS+I A +HG G EA+ LFE
Sbjct: 325 CPNLLLENALMDMYASCGCLKDAREIFDLMSAR-DVISWTSIISAYGKHGHGREAVDLFE 383
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+ML G++PD I +V VL AC+H GL+ G+ Y++ M + + I P H+ MVDLLGRA
Sbjct: 384 KMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRA 443
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G + EAY+FI M +EP+ WG+LL ACR+H N+D+G +AA+ L + P+ +G Y L
Sbjct: 444 GCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLS 503
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ G+W D ++R M G+KK G S V++ ++VH F + D HPQ + IY+K+
Sbjct: 504 NMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLD 563
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
++ +I+ MG+ P+ + LHDVEE+ KE L HSEKLAIAF L++T T +R+ NLR
Sbjct: 564 ELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLR 623
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C+DCH A K I + REIV++D R HH +G+CSC DYW
Sbjct: 624 TCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 191/456 (41%), Gaps = 84/456 (18%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR-------FKNAIRMFVEMV 137
++ AYA L LA V + D S TT V +N + R ++A+ +F M
Sbjct: 56 LIQAYAACSALPLAHTVLE-SSSPDGRSRTTT-VCFNVLIRALTASSLHRDALVLFASMR 113
Query: 138 Q--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
P +T L SC+A DL G ++HS V K L V V +S ++MY++ G
Sbjct: 114 PRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGR 173
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA------------------------- 230
A VFDGM ++V SWN +++ G D A
Sbjct: 174 PEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILP 233
Query: 231 -------------RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
R FD M +++++WN+M+A Y+ N + +A+ +F M KD ++PD
Sbjct: 234 AMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKD-EVEPD 292
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
TLA+ L C L +GK+IH I R + NAL+ YA G ++ A++I
Sbjct: 293 SITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREI-- 350
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAV 397
FD + RDV++WT+++ Y ++G ++AV
Sbjct: 351 -------------------------------FDLMSARDVISWTSIISAYGKHGHGREAV 379
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-RSGEASSLSVSNALITM 456
+LF M+ +G +P++ A+L+ S L GK S R ++ +
Sbjct: 380 DLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDL 439
Query: 457 YSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+AG IN A + W +++ A H
Sbjct: 440 LGRAGCINEAYDFITTMLIEPNERVWGALLQACRIH 475
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 143/334 (42%), Gaps = 70/334 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P P+ Y L+S S++ +G +H+ + K L +V++ +S ++ Y++
Sbjct: 114 PRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGR 173
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNL-------MPN--------- 107
A +VFD MP + + SWN +++ +A+ G D A EVF MP+
Sbjct: 174 PEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILP 233
Query: 108 ----------------------RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
++ +SW ++ Y A+ +F+ M +D+V P
Sbjct: 234 AMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDS 293
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
T+ +VL C L S GK++H + + + + + N+L++MYA G A+ +FD
Sbjct: 294 ITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDL 353
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M ++V SW S+I+ Y ++G+ EA+ +F
Sbjct: 354 MSARDVISW-------------------------------TSIISAYGKHGHGREAVDLF 382
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
ML L+PD + L+AC++ L GK
Sbjct: 383 EKMLG-QGLEPDSIAFVAVLAACSHAGLLADGKH 415
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H I + + ++ L+N+LM+ YA + A+++FD M + + SW +I+SAY
Sbjct: 311 VGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYG 370
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEM 136
K G A ++F M + DS+++ ++ + G + F M
Sbjct: 371 KHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSM 420
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK--PDHITYVGVLTACTHGGLVEQG 533
R TV + +I AL L +A+ LF M G PDH TY L +C+ + G
Sbjct: 83 RTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLG 142
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
+ ++ + + ++ S + + R G ++AY + MP DVV+W ++++
Sbjct: 143 LQIHSAVAKL-RLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMP-HRDVVSWNAMIAGFA 200
Query: 594 VHKNLDLGKIAAEKLLLIE---PDN---SGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
D ++ ++++ PD +G A+ N K +D +R+ +
Sbjct: 201 RVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN-----AKPDDIRFVRRVFDNMQF 255
Query: 648 KKTQGFSW-----VQIQNKVHVFGVEDWLHPQRDAI 678
K+ SW V N+ HV VE ++ ++D +
Sbjct: 256 KEL--ISWNAMLAVYANNEFHVKAVELFMLMEKDEV 289
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 341/576 (59%), Gaps = 15/576 (2%)
Query: 217 VVSLHIHS-----GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
V++L +H G++ + A F Q I+ D+ + + I S NG +A ++ +L
Sbjct: 63 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS- 121
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S + P++FT +S L +C+ K GK IH ++++ V L+ YAK G V
Sbjct: 122 SQINPNEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVS 177
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AQK+ ++ + ++++ T ++ Y K G++ AR +FD + +RD+V+W M+ GY Q+G
Sbjct: 178 AQKVFDR--MPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHG 235
Query: 392 LNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
DA+ LF+ ++ +G PKP+ T+ A LS S + +L+ G+ IH S ++ V
Sbjct: 236 FPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVC 295
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-G 509
ALI MYSK G++ A VFN R++ V+W +MI A HG ++A++LF+ M + G
Sbjct: 296 TALIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITG 354
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P IT++G L AC H GLV +G + + M + IKP H+ +V LLGRAG L+ A
Sbjct: 355 LQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 414
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y I+NM +E D V W S+L +C++H LGK AE L+ NSG Y L N+Y+
Sbjct: 415 YEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALV 474
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G +E A +R MK G+ K G S ++I NKVH F D H + IY + K+ + I
Sbjct: 475 GDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERI 534
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K G+VP+T +VLHD+EE KE+ L+ HSE+LAIA+GLIST + L+I KNLRVC+DCH
Sbjct: 535 KSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCH 594
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K I K+ R+IV+RD RFHHF G CSC D+W
Sbjct: 595 TVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 208/415 (50%), Gaps = 42/415 (10%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AYA G++ + +F+ + D +T I T + G A ++V+++ Q+ P +FT
Sbjct: 71 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S+L SC+ +GK +H+ V+K GL V L+++YAK GD + A+ VFD M
Sbjct: 131 FSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMP 186
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+++ S +++ + G ++ ARA FD+M ERD+V+WN MI GYSQ+G+ +AL +F
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+L D KPD+ T+ + LSAC+ + L+ G+ IH ++ + V ALI Y+K G
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCG 306
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A +F+ +D+VAW AM+ GY
Sbjct: 307 SLE---------------------------------EAVLVFNDTPRKDIVAWNAMITGY 333
Query: 388 EQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEAS 445
+G ++DA+ LF M G +P + T L + ++ G QI S G
Sbjct: 334 AMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKP 393
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE 497
+ L+++ +AG + A + ++ ++V W+S++ + HG LG+E
Sbjct: 394 KIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKE 448
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 169/336 (50%), Gaps = 44/336 (13%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
S I+P EF S LKS + GKL+H ++K GL L ++ L++ YAK + A
Sbjct: 122 SQINPNEF---TFSSILKSCSTKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSA 178
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+KVFD MP ++L S +++ YAKQG ++ A +F+ M RD VSW +I Y++ G
Sbjct: 179 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPS 238
Query: 128 NAIRMFVEMVQD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+A+ +F +++ D + P + TV + L++C+ +G L G+ +H FV + + V V +L
Sbjct: 239 DALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTAL 298
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MY+K G A VF+ K++ +W N
Sbjct: 299 IDMYSKCGSLEEAVLVFNDTPRKDIVAW-------------------------------N 327
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI-----H 301
+MI GY+ +GY +AL +F M + L+P T TL ACA+ + G QI
Sbjct: 328 AMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQ 387
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
Y I+ + + G L+S + G ++ A +I++
Sbjct: 388 EYGIKPKIEHYG----CLVSLLGRAGQLKRAYEIIK 419
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/706 (34%), Positives = 384/706 (54%), Gaps = 69/706 (9%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
S + ++ A K G +D A +VF+ M R V+W ++I + R K A+ M+ M+ +
Sbjct: 101 SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNN 160
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
VLP ++T++SV A DLS K+ GL
Sbjct: 161 VLPDEYTLSSVFK---AFSDLSLEKEAQR---SHGL------------------------ 190
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
AV G+ + NV + +V +++ G+ A+ D++ E+DVV ++I GYSQ G D E
Sbjct: 191 AVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTE 250
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ F +ML + ++P+++T AS L +C NL+ + GK IH ++++ F++
Sbjct: 251 AVKAFQSMLVEK-VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA-------- 301
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+ + T+LL Y++ + + R+F + + V+W
Sbjct: 302 -------------------------LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
T+++ G QNG + A+ FR M+R+ KPN++TLS+ L S+LA + G+QIH +
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + LI +Y K G + AR VF+ + + +S +MI + AQ+G G EA+
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVISLNTMIYSYAQNGFGREALD 455
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
LFERM+ LG++P+ +T + VL AC + LVE+G ++ + KI T H+A MVDLL
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLL 514
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L+EA + + PD+V W +LLSAC+VH+ +++ + K+L IEP + G
Sbjct: 515 GRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWL-HPQRDAIY 679
+ NLY+S GKW ++ MK + +KK SWV+I + H F D HP + I
Sbjct: 574 LMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQIL 633
Query: 680 NKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIM 739
+ ++ + K++G+V D + V D+EE KE+ L HSEKLAIAF + ++RI+
Sbjct: 634 ENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNV-GGSIRIL 692
Query: 740 KNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KNLRVC DCHS IK + +++ REI+ RD+ RFHHF+ G CSC DYW
Sbjct: 693 KNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 156/303 (51%), Gaps = 14/303 (4%)
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
+ G++ Q + +SG + I+ + L+D +K GDI AR++FD + +R +V W +++
Sbjct: 81 ISGIKTIQAHMLKSG--FPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIA 138
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EA 444
++ +K+AVE++R M+ P+ YTLS++ S L+ ++ H A+ G E
Sbjct: 139 YLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV 198
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
S++ V +AL+ MY K G A+ V + + ++ V T++IV +Q G EA++ F+
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVE-EKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG--- 561
ML ++P+ TY VL +C + + G+ + +M S AS LL
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK----SGFESALASQTSLLTMYL 313
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAY 619
R L+ ++ + + P+ V+W SL+S + ++ I K++ I+P++
Sbjct: 314 RCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLS 372
Query: 620 SAL 622
SAL
Sbjct: 373 SAL 375
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 140/330 (42%), Gaps = 64/330 (19%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P E+ YA +L S ++ GKL+H ++K G
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE----------------------- 299
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
L S ++L+ Y + +D + VF + + VSWT++I + GR +
Sbjct: 300 --------SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ F +M++D + P FT++S L C+ L G+++H V K G + L++
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
+Y K G MA+ VFD + E DV++ N+M
Sbjct: 412 LYGKCGCSDMARLVFDTLS-------------------------------EVDVISLNTM 440
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I Y+QNG+ EAL +F M+ + L+P+ T+ S L AC N ++ G ++ + +
Sbjct: 441 IYSYAQNGFGREALDLFERMI-NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDK 499
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
T ++ + G +E A+ + +
Sbjct: 500 IMLTNDHYACMVDLLGRAGRLEEAEMLTTE 529
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/561 (38%), Positives = 320/561 (57%), Gaps = 35/561 (6%)
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G L A F Q+ WN++I G+ Q+ A + +M+ S K D T +
Sbjct: 53 GNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSR-KVDALTCSFV 111
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L ACA + QIH +I+R F A +G
Sbjct: 112 LKACARVLARLESIQIHTHIVRKGFIADALLG---------------------------- 143
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
TTLLD Y K+G+I A ++FD + RD+ +W A++ G+ Q +A+ LF+ M
Sbjct: 144 -----TTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRME 198
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+G KPN ++ LS + L G++IH + V N +I MY+K G ++
Sbjct: 199 IDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVD 258
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
A VF + R++ V+W +MI+A A HG G +A++LFE+M + G+ PD ++Y+ VL AC
Sbjct: 259 KAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCAC 318
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
HGGLVE+G R +N M+N +KP H+ S+VDLLGRAG L EAY+ + +MP PD+V
Sbjct: 319 NHGGLVEEGFRLFNSMENC-GVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVL 377
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
W +LL A R H+N+++ + + KL+ + ++ G + L N+Y++ +W D +R++MK
Sbjct: 378 WQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKN 437
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
VKK G S+++ +H F D H IY K+ +I +KE G+V +T+ VLHD
Sbjct: 438 RDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHD 497
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+ E+ KE +L HHSEKLA+AFGLIST E T ++++KNLR+C DCH IK I K+ DREI+
Sbjct: 498 IGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREII 557
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
VRD RFH FK+G CSCRDYW
Sbjct: 558 VRDRVRFHRFKEGFCSCRDYW 578
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 182/427 (42%), Gaps = 67/427 (15%)
Query: 85 ILSAYA-KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
+L YA G L A F+ + + W II + + NA + M+
Sbjct: 44 LLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKV 103
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
T + VL +C + ++H+ +V+ G + +LL++YAKVG+ A+ VF
Sbjct: 104 DALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVF 163
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
D M ++++SW N++I+G++Q EAL
Sbjct: 164 DEMVKRDIASW-------------------------------NALISGFAQGSKPTEALS 192
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M D KP++ ++ LSACA L K G++IH YI FD V N +I Y
Sbjct: 193 LFKRMEID-GFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMY 251
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTA 382
AK G V+ A YL +F+S+ R D+V W
Sbjct: 252 AKCGFVDKA----------YL-----------------------VFESMSCRKDIVTWNT 278
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M++ + +G A+ELF M + G P++ + A+L + ++ G ++ S G
Sbjct: 279 MIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCG 338
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ +++ + +AG ++ A + N + + V W +++ A H E A +
Sbjct: 339 VKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVS 398
Query: 503 ERMLELG 509
+++E+G
Sbjct: 399 RKLVEMG 405
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 25/355 (7%)
Query: 348 AFTTLLDGY-IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
A + LL+ Y + +G++ A F +R W A++ G+ Q+ +A ++SM+ +
Sbjct: 40 ARSKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISK 99
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
K + T S +L + + + QIH +R G + + L+ +Y+K G I++A
Sbjct: 100 SRKVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSA 159
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+VF+ + +++ SW ++I AQ EA+ LF+RM G KP+ I+ +G L+AC
Sbjct: 160 EKVFDEM-VKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQ 218
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
G ++G++ + +K V + ++D+ + G + +AY E+M D+V W
Sbjct: 219 LGDFKEGEKIHGYIK-VERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWN 277
Query: 587 SLLSACRVH----KNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
+++ A +H K L+L + + + PD+ + LC + G E+ + SM
Sbjct: 278 TMIMAFAMHGEGCKALELFEKMDQS--GVSPDDVSYLAVLCAC-NHGGLVEEGFRLFNSM 334
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPD 697
+ GVK N H V D L ++ + +D + M VPD
Sbjct: 335 ENCGVKP----------NVKHYGSVVDLLGRA-----GRLHEAYDIVNSMPTVPD 374
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 31/240 (12%)
Query: 49 FLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR 108
F+ + A+ ESI + + + T+L YAK G +D A +VF+ M R
Sbjct: 110 FVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKR 169
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
D SW +I + + + A+ +F M D P + +V L++C LGD G+K+H
Sbjct: 170 DIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIH 229
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
++ V N +++MYAK G A VF+ M +
Sbjct: 230 GYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCR------------------- 270
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
+D+VTWN+MI ++ +G +AL +F M S + PD + + L AC
Sbjct: 271 -----------KDIVTWNTMIMAFAMHGEGCKALELFEKM-DQSGVSPDDVSYLAVLCAC 318
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA---LITMYSKA-GNINAARRV 469
+L + LS ++L SL H KQ+HA +G+ L +S A L+ +Y+ + GN++ A
Sbjct: 4 SLDSFLSKCTTL-SLPHTKQLHAHLFTTGQF-RLPISPARSKLLELYALSLGNLSFAILT 61
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG-G 528
F+ I T W ++I Q A ++ M+ K D +T VL AC
Sbjct: 62 FSQIR-TPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLA 120
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+E Q + ++++ +++D+ + G + A + M ++ D+ +W +L
Sbjct: 121 RLESIQIHTHIVRKGFIADALLG--TTLLDVYAKVGEIDSAEKVFDEM-VKRDIASWNAL 177
Query: 589 LSA 591
+S
Sbjct: 178 ISG 180
>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 866
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/730 (33%), Positives = 379/730 (51%), Gaps = 56/730 (7%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+D+V W + E G + AI F EM V + L +C G G+ V
Sbjct: 141 KDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRAV 200
Query: 168 HSFVVKTGLSGCVNVTNSLL-NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
H+ ++ GL + L MYA+ D A V V +WN V++ + G
Sbjct: 201 HAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLGL 260
Query: 227 LD--------LAR-AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
+D +AR A+ + E + TWN++++G +++G D EAL + ML+ L PD
Sbjct: 261 VDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGIL-PD 319
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
T++S L + AN L G ++H + +R G AL+ YAK G ++IAQ++ +
Sbjct: 320 AATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFD 379
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLN 393
G+ + N+ + +L+ G+ G A + ++++ D +V W ++ GY NGL+
Sbjct: 380 --GLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLS 437
Query: 394 -----------------------------------KDAVELFRSMVREGPKPNNYTLSAM 418
+D+ F M ++G +P+ T+ +
Sbjct: 438 SQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVL 497
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L + LA L GK++H ALR + VS ALI MY+KAG++ +A+RVF + +
Sbjct: 498 LRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKN- 556
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
V +M+ LA HG EA LF M G+KPD IT+ +LTAC GLV + Y +
Sbjct: 557 LVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLD 616
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M+ + + PT H A MVDLL R G L EA FIE P EP +WG+LL+ C +H NL
Sbjct: 617 DMEAKYGVAPTAEHHACMVDLLARRGYLDEAMTFIERSPAEPGASSWGALLTGCAIHGNL 676
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
DL + AA L +EP NS Y A+ +LY +++A +++ +MK GV G+SW Q
Sbjct: 677 DLAESAARHLFKLEPHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQA 736
Query: 659 QNKVHVFGVEDW--LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
+HVF V+ HP+ IY++M+++ +++ +G+VPDT + +DV E+ KE +L
Sbjct: 737 GRSIHVFEVDGGSSPHPETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDVPEEEKELLLLC 796
Query: 717 HSEKLAIAFGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFK 775
H+EKLA+ +GLI S +R++KN R+C DCH IK + L R+I++RDA+RFHHF
Sbjct: 797 HTEKLAVVYGLIRSDKSRAPVRVVKNTRMCRDCHEVIKHVSALCGRQIILRDASRFHHFV 856
Query: 776 KGLCSCRDYW 785
G CSC DYW
Sbjct: 857 DGKCSCDDYW 866
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 218/513 (42%), Gaps = 86/513 (16%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VHA ++ GL + L YA+ ++ A V + +WN +++
Sbjct: 197 GRAVHAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCV 256
Query: 91 KQGRLDLACEVFNLMPNRDS----------VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
+ G +D A E+ M RD+ +W T++ GR + A+ + M++
Sbjct: 257 RLGLVDDALELAERMA-RDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQG 315
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+LP TV+S+L S G L G +VH F ++ GLS +L++MYAK G +A+
Sbjct: 316 ILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQ 375
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNG 256
VFDG+ +N+++WN +V+ H ++G D A + M I+ +V TWN +I GY+ NG
Sbjct: 376 RVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNG 435
Query: 257 YDFEAL-----------------------------------GMFANMLKDSSLKPDKFTL 281
+A+ F+ M +D ++P T+
Sbjct: 436 LSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQD-GIQPSLVTM 494
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
L ACA L L GK++H + +R +D V ALI YAK
Sbjct: 495 LVLLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKA--------------- 539
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
G + A+R+F ++ +++V AML G +G +A LF
Sbjct: 540 ------------------GSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFH 581
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKA 460
M R G KP+ T +A+L+ S+ + + + + G A + ++ + ++
Sbjct: 582 DMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARR 641
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
G ++ A SW +++ A HG
Sbjct: 642 GYLDEAMTFIERSPAEPGASSWGALLTGCAIHG 674
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 183/436 (41%), Gaps = 84/436 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL+S S + G VH ++ GL + +L++ YAK + A++VFD + +
Sbjct: 326 LLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRN 385
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLM------PNRDS---------------------- 110
L +WN++++ +A G D A E+ M PN +
Sbjct: 386 LATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLR 445
Query: 111 -----------VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
VSWT++I G ++++ F EM QD + P+ T+ +L +C L
Sbjct: 446 QIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLA 505
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
L+ GK++H F ++ G V V+ +L++MYAK G AK VF ++ KN
Sbjct: 506 LLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKN--------- 556
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
+V N+M+ G + +G EA +F +M + S LKPD
Sbjct: 557 ----------------------LVCCNAMLTGLAVHGQAHEAAALFHDMWR-SGLKPDGI 593
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFD-ATGPVGN---ALISCYAKVGGVEIAQKI 335
T + L+AC + L + Y+ E P ++ A+ G ++ A
Sbjct: 594 TFTALLTAC---RSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLDEAMTF 650
Query: 336 VEQS----GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+E+S G S + + G + + + AR +F L + + AM+ YEQ+
Sbjct: 651 IERSPAEPGASSWGALLTGCAIHGNLDLAE-SAARHLF-KLEPHNSANYLAMMSLYEQHQ 708
Query: 392 LNKDAVELFRSMVREG 407
+ +A L +M G
Sbjct: 709 MFDEAESLKYAMKARG 724
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/562 (39%), Positives = 339/562 (60%), Gaps = 4/562 (0%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
SG L AR FD++ + WN+MI GYS + EAL ++ +ML S + + +T
Sbjct: 65 SGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHS-VPHNAYTFPF 123
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
L AC+++ + +QIHA+II+ F + N+L++ Y+K G ++ A+ + +Q +
Sbjct: 124 LLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQ--VDQ 181
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+ +++ +++DGY K G+I A IF+ + +R++++WT+M+ G G K+A+ LF M
Sbjct: 182 RDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRM 241
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
G K +N L + L + L LD GK IHA + + LI MY+K G++
Sbjct: 242 QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDL 301
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
A VF + + +V WT+MI A HG G EA++ F +M G++P+ +T+ G+LTA
Sbjct: 302 EEAIEVFRKMEEKGVSV-WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTA 360
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLV + + + M+ +H KP+ H+ MVDLLGRAGLL+EA IENMP++P+
Sbjct: 361 CSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAA 420
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
WG+LL+AC +H NL+LGK + L+ ++P + G Y L +++++ G+W AA +R+ MK
Sbjct: 421 IWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMK 480
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
GV K G S + + H F D HPQ I + + +I + ++E G+ P +L
Sbjct: 481 EQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLL 540
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
D+E+ KE + HHSEKLA+ FGLIST T+RI+KNLRVC DCH+ IK I K+ REI
Sbjct: 541 DLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREI 600
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
++RD TRFH FK G C+C DYW
Sbjct: 601 LMRDRTRFHLFKDGNCTCGDYW 622
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 217/474 (45%), Gaps = 42/474 (8%)
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
+ DE+P L ++ A G L A VF+ + ++ W T+I Y+ + A
Sbjct: 47 ILDEIPASKLLAF----CASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEA 102
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ ++ M+ V +T +L +C+++ +++H+ ++K G + TNSLLN+
Sbjct: 103 LLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNV 162
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y+K GD A+ +FD + ++ SWN ++ + G +++A F+ M ER++++W SMI
Sbjct: 163 YSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMI 222
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
+G G EAL +F M + + +K D L STL ACA+L L GK IHAYI + E
Sbjct: 223 SGCVGAGKPKEALNLFHRM-QTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEI 281
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
+ +G LI YAK G D+ A +F
Sbjct: 282 EIDPILGCVLIDMYAKCG---------------------------------DLEEAIEVF 308
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ ++ V WTAM+ GY +G ++A+E F M G +PN T + +L+ S +
Sbjct: 309 RKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVH 368
Query: 430 HGKQIHASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
K + S R G S+ ++ + +AG + A + + + W +++ A
Sbjct: 369 EAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDH-ITYVGVLTACTHGGLVEQGQRYYNMMK 541
HG E Q+ + +++ + P H Y+ + + G Q R MK
Sbjct: 429 CHIHGNLELGKQIGKILIQ--VDPGHGGRYIHLASIHAAAGEWNQAARVRRQMK 480
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 50/354 (14%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+HA IIK G ++ NSL+N Y+K+ I A+ +FD++ + SWN+++ Y K G
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+++A E+FN MP R+ +SWT++I G+ K A+ +F M + + S L +
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 155 CTALGDLSAGKKVHSFVVKTGLS-----GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
C LG L GK +H+++ K + GCV L++MYAK GD A VF M K
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCV-----LIDMYAKCGDLEEAIEVFRKMEEK 314
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMF 265
VS W ++S + GR A F +M +E + +T+ ++ S G EA +F
Sbjct: 315 GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLF 374
Query: 266 ANM--------------------------------LKDSSLKPDKFTLASTLSACANLEK 293
+M +++ +KP+ + L+AC
Sbjct: 375 ESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGN 434
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI---VEQSGISYL 344
L+LGKQI +I+ + G + L S +A G A ++ +++ G+S L
Sbjct: 435 LELGKQIGKILIQVDPGHGGRYIH-LASIHAAAGEWNQAARVRRQMKEQGVSKL 487
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 47/219 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA I K + + L L++ YAK + A +VF +M K + W ++S YA
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR R+++ W F++M V P Q T T +
Sbjct: 329 HGR------------GREALEW-------------------FMKMQTAGVEPNQMTFTGI 357
Query: 152 LASCTALGDLSAGK-------KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
L +C+ G + K ++H F GC ++++ + G A+ + +
Sbjct: 358 LTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC------MVDLLGRAGLLKEAEELIE 411
Query: 205 GMRLK-NVSSWNVVV-SLHIHSGRLDLARAQFDQMIERD 241
M +K N + W ++ + HIH G L+L + +I+ D
Sbjct: 412 NMPVKPNAAIWGALLNACHIH-GNLELGKQIGKILIQVD 449
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/715 (35%), Positives = 386/715 (53%), Gaps = 95/715 (13%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTE--SISYAKKVFDEMPVKTLCSWNTILSAYA 90
K +H++IIK GLH + F + L+ F A + ++SYA +F+ + WNT++
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRG-- 106
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+S+S + + AI +V M+ V P +T
Sbjct: 107 ------------------NSLSSSPV-----------GAIDFYVRMLLCGVEPNSYTFPF 137
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L SC +G GK++H V+K GL V SL+NMYA+ G+ A+ VF L++
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
S+ +++ + G LD AR F+++ RD V+WN+MIAGY+Q+G EAL F M K
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM-K 256
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+++ P++ T+ + LSACA L+LG + ++I
Sbjct: 257 RANVAPNESTMVTVLSACAQSGSLELGNWVRSWI-------------------------- 290
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
E G+ N+ L+D Y K GD+ AR +F+ + ++D+++W M+ GY
Sbjct: 291 ------EDHGLGS-NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA-SSLSV 449
K+A+ LFR M + +PN+ T ++L + L +LD GK IHA + ++ S+
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+LI MY+K GNI AA++VF + + SW +MI LA HG A++LF +M + G
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMK-PKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+PD IT+VGVL+AC+H GLVE G++ ++ M + I P H+ M+DLLGRAGL EA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
++NM ++PD WGSLL ACRVH N++LG+ AA+ L +EP+N GAY L N+Y++
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+W+D A IR + G+KK Q IY + +I
Sbjct: 583 GRWDDVARIRTKLNDKGMKKXQD-------------------------IYKMLDEIDQSF 617
Query: 690 KEM-GFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
E G VPDT+ VL+D++E+ KE L HHSEKLAIAFGLIST TT+RI+KNLR
Sbjct: 618 GERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLR 672
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 234/494 (47%), Gaps = 71/494 (14%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ LL+S K GK +H ++K GL F+ SL+N YA+ + YA+ VF +
Sbjct: 135 FPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSS 194
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
++ S+ +++ Y +G LD A +F +P RD+VSW +I Y + GRF+ A+ F E
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V P + T+ +VL++C G L G V S++ GL + + N+L++MY+K GD
Sbjct: 255 MKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD 314
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +F+G+ K++ SWNV MI GYS
Sbjct: 315 LDKARDLFEGICEKDIISWNV-------------------------------MIGGYSHM 343
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG-P 314
EAL +F M + S+++P+ T S L ACA L L LGK IHAYI + T
Sbjct: 344 NSYKEALALFRKM-QQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ +LI YAK G +E A+++F ++
Sbjct: 403 LWTSLIDMYAKCGNIE---------------------------------AAKQVFAGMKP 429
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+ + +W AM+ G +G A+ELFR M EG +P++ T +LS S ++ G+Q
Sbjct: 430 KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQC 489
Query: 435 HASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
+S + + S L +I + +AG + A + + + + W S++ A HG
Sbjct: 490 FSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549
Query: 494 ---LGEEAIQ-LFE 503
LGE A + LFE
Sbjct: 550 NVELGEFAAKHLFE 563
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/636 (35%), Positives = 363/636 (57%), Gaps = 36/636 (5%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C SA ++HS ++K G ++N+LL++Y K G ++ +A+
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCG--LIPQAL--------- 58
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
FD+M RD V+W S++ +++ L M M
Sbjct: 59 --------------------QLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTH 98
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L+PD F A + AC++L L+LGKQ+HA + + F V ++LI Y K G +
Sbjct: 99 DGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDE 158
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+ + + I + N +++T+++ GY + G A +F R++ +WTA++ G Q+G
Sbjct: 159 ARAVFDS--ILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSG 216
Query: 392 LNKDAVELFRSMVREGPK-PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ LF M REG + LS+++ ++LA L+ GKQIH + G S L +S
Sbjct: 217 HGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFIS 276
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+ MY+K +I AA+ +F + R++ +SWTS+IV AQHG EEA+ L++ M+ I
Sbjct: 277 NALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRI 335
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T+VG+L AC+H GLV +G+ + M + I P+ H+ ++DLL R+G L EA
Sbjct: 336 KPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAE 395
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
N ++ +P +PD W SLLSAC H NL++G A+++L ++P++ Y L N+Y+
Sbjct: 396 NLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAE 455
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV-EDWLHPQRDAIYNKMAKIWDEI 689
W + +RK M + V+K G+S + VF E HP ++ I N + + E+
Sbjct: 456 MWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEM 515
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
++ G+VP+T+ VL+D+E+ KE+ L HSE+LA+A+GL+ T +RI+KNLR+C DCH
Sbjct: 516 RKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCH 575
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +KFI +V REI+VRDATR+HHFK+G CSC D+W
Sbjct: 576 NVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 242/506 (47%), Gaps = 69/506 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ H LQ + ++ +H++IIK G F K+SL++
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAG-----FDKSSLLS------------------- 41
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
NT+L Y K G + A ++F+ MPNRD VSW +I+ +N+ + + M
Sbjct: 42 -------NTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNT 94
Query: 136 M-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M D + P F ++ +C++LG L GK+VH+ + + V +SL++MY K G
Sbjct: 95 MFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCG 154
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+AVFD + KN SW ++S + SGR A F Q R++ +W ++I+G Q
Sbjct: 155 QPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQ 214
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G+ + +F M ++ D L+S + CANL L+LGKQIH +I F++
Sbjct: 215 SGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLF 274
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ NAL+ YAK DI A+ IF +
Sbjct: 275 ISNALVDMYAKC---------------------------------SDILAAKDIFYRMPR 301
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+DV++WT+++VG Q+G ++A+ L+ MV KPN T +L S + G+++
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361
Query: 435 HASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
S + SL L+ + S++G+++ A + + I ++ + +W S++ A +H
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN 421
Query: 494 LGEEAIQLFERMLELGIKP-DHITYV 518
E +++ +R+L+L KP D TY+
Sbjct: 422 NLEMGVRIADRVLDL--KPEDPSTYI 445
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 332/553 (60%), Gaps = 5/553 (0%)
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS-LKPDKFTLASTLSACANLE 292
DQ + + NSMI YS++ ++ + +L+ + + PD +T + CA
Sbjct: 66 LDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-S 124
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
+ G +H +I+ F+ V + LI YA++ + ++ E + +++ TT+
Sbjct: 125 ACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFES--VQKPDLVCQTTM 182
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
+ K GDIG AR +FDS+ RD V+W AM+ GY Q G +++A+ LF+ M +G K N
Sbjct: 183 VSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNE 242
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
++ ++++ + L +LD GK HA ++ ++++ AL+ MY K GN++ A +VF
Sbjct: 243 VSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWE 302
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
++ + +W++ I LA +G G++ ++LF M GI P+ IT++ VL C+ G V++
Sbjct: 303 MN-EKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDE 361
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
G+ +++ MK H I+P H+ MVDL GRAG L+EA NFI MPL+P AWG+LL+AC
Sbjct: 362 GRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNAC 421
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQG 652
R++KN++LG+ A+ KL+ +E N GAY +L N+Y+ G W+ +N+R+SMK G+ K G
Sbjct: 422 RMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPG 481
Query: 653 FSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ 712
S +++ +VH F D HP D I +I +K G+V T SVL D+EE+ KE
Sbjct: 482 CSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKED 541
Query: 713 MLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
L HSEK+AIAFGL S E +RI+KNLR+C DCH K I K+ +REI+VRD RFH
Sbjct: 542 ALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFH 601
Query: 773 HFKKGLCSCRDYW 785
HFK G CSC+D+W
Sbjct: 602 HFKDGECSCKDFW 614
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 201/459 (43%), Gaps = 72/459 (15%)
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
Y+ ++ D+ TL + N+++ AY+K +L P++ + I+ +
Sbjct: 61 YSNQILDQCAKPTLFALNSMIRAYSK-----------SLTPHKSFQFYNKILQS------ 103
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
D + P +T ++ +C A AG VH ++K G +V +
Sbjct: 104 ------------NDVMSPDNYTFNFLVRTC-AQSACEAGPAVHGALIKHGFEYDPHVESG 150
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
L+ MYA++ VF+ ++ ++ +VS G + AR FD M +RD V+W
Sbjct: 151 LIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSW 210
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N+MIAGY+Q G EAL +F M D +K ++ ++ S ++AC +L L GK HAYI
Sbjct: 211 NAMIAGYAQRGQSREALNLFKLMQMD-GVKVNEVSMISVVTACTHLGALDQGKWAHAYIE 269
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
+ + T +G AL+ Y K G V+ A K
Sbjct: 270 KNKIQMTVNLGTALVDMYFKCGNVDRALK------------------------------- 298
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
+F + +++V W+ + G NG + +ELF M EG PN T ++L S +
Sbjct: 299 --VFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVV 356
Query: 426 ASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
+D G+ S R G L ++ +Y +AG + A N + + +W +
Sbjct: 357 GFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGA 416
Query: 485 MIVALAQHG---LGEEAIQLFERMLELGIKPDHITYVGV 520
++ A + LGE A + +++E+ K +H YV +
Sbjct: 417 LLNACRMYKNMELGEFASR---KLIEVEGK-NHGAYVSL 451
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 165/379 (43%), Gaps = 48/379 (12%)
Query: 9 LISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
++SP + + L G VH +IK G +++ L+ YA+ +S
Sbjct: 106 VMSPDNYTFNFLVRTCAQSACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCH 165
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+VF+ + L T++SA AK G + A +F+ MP RD VSW +I Y + G+ +
Sbjct: 166 RVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSRE 225
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ +F M D V + ++ SV+ +CT LG L GK H+++ K + VN+ +L++
Sbjct: 226 ALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVD 285
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS-----------LHIHS------------- 224
MY K G+ A VF M KNV +W+ + L + S
Sbjct: 286 MYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEIT 345
Query: 225 -----------GRLDLARAQFDQM-----IERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
G +D R+ FD M IE + + M+ Y + G EAL N
Sbjct: 346 FISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEAL----NF 401
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ LKP + L+AC + ++LG+ +I E G +L + YA G
Sbjct: 402 INTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAY-VSLSNIYADTGN 460
Query: 329 ---VEIAQKIVEQSGISYL 344
V ++ ++ GIS L
Sbjct: 461 WDRVSNVRQSMKAEGISKL 479
>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/730 (33%), Positives = 379/730 (51%), Gaps = 56/730 (7%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
+D+V W + E G + AI F EM V + L +C G G+ V
Sbjct: 142 KDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRAV 201
Query: 168 HSFVVKTGLSGCVNVTNSLL-NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
H+ ++ GL + L MYA+ D A V V +WN V++ + G
Sbjct: 202 HAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLGL 261
Query: 227 LD--------LAR-AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
+D +AR A+ + E + TWN++++G +++G D EAL + ML+ L PD
Sbjct: 262 VDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGIL-PD 320
Query: 278 KFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
T++S L + AN L G ++H + +R G AL+ YAK G ++IAQ++ +
Sbjct: 321 AATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFD 380
Query: 338 QSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLN 393
G+ + N+ + +L+ G+ G A + ++++ D +V W ++ GY NGL+
Sbjct: 381 --GLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLS 438
Query: 394 -----------------------------------KDAVELFRSMVREGPKPNNYTLSAM 418
+D+ F M ++G +P+ T+ +
Sbjct: 439 SQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVL 498
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
L + LA L GK++H ALR + VS ALI MY+KAG++ +A+RVF + +
Sbjct: 499 LRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKN- 557
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
V +M+ LA HG EA LF M G+KPD IT+ +LTAC GLV + Y +
Sbjct: 558 LVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLD 617
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M+ + + PT H A MVDLL R G L EA FIE P EP +WG+LL+ C +H NL
Sbjct: 618 DMEAKYGVAPTAEHHACMVDLLARRGYLDEAMAFIERSPAEPGASSWGALLTGCAIHGNL 677
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
DL + AA L +EP NS Y A+ +LY +++A +++ +MK GV G+SW Q
Sbjct: 678 DLAESAARHLFKLEPHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQA 737
Query: 659 QNKVHVFGVEDW--LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
+HVF V+ HP+ IY++M+++ +++ +G+VPDT + +DV E+ KE +L
Sbjct: 738 GRSIHVFEVDGGSSPHPETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDVPEEEKELLLLC 797
Query: 717 HSEKLAIAFGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFK 775
H+EKLA+ +GLI S +R++KN R+C DCH IK + L R+I++RDA+RFHHF
Sbjct: 798 HTEKLAVVYGLIRSDKSRAPVRVVKNTRMCRDCHEVIKHVSALCGRQIILRDASRFHHFV 857
Query: 776 KGLCSCRDYW 785
G CSC DYW
Sbjct: 858 DGKCSCDDYW 867
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 218/513 (42%), Gaps = 86/513 (16%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VHA ++ GL + L YA+ ++ A V + +WN +++
Sbjct: 198 GRAVHAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCV 257
Query: 91 KQGRLDLACEVFNLMPNRDS----------VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
+ G +D A E+ M RD+ +W T++ GR + A+ + M++
Sbjct: 258 RLGLVDDALELAERMA-RDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQG 316
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
+LP TV+S+L S G L G +VH F ++ GLS +L++MYAK G +A+
Sbjct: 317 ILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQ 376
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNG 256
VFDG+ +N+++WN +V+ H ++G D A + M I+ +V TWN +I GY+ NG
Sbjct: 377 RVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNG 436
Query: 257 YDFEAL-----------------------------------GMFANMLKDSSLKPDKFTL 281
+A+ F+ M +D ++P T+
Sbjct: 437 LSSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQD-GIQPSLVTM 495
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
L ACA L L GK++H + +R +D V ALI YAK
Sbjct: 496 LVLLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKA--------------- 540
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
G + A+R+F ++ +++V AML G +G +A LF
Sbjct: 541 ------------------GSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFH 582
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKA 460
M R G KP+ T +A+L+ S+ + + + + G A + ++ + ++
Sbjct: 583 DMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARR 642
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
G ++ A SW +++ A HG
Sbjct: 643 GYLDEAMAFIERSPAEPGASSWGALLTGCAIHG 675
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 183/436 (41%), Gaps = 84/436 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
LL+S S + G VH ++ GL + +L++ YAK + A++VFD + +
Sbjct: 327 LLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRN 386
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLM------PNRDS---------------------- 110
L +WN++++ +A G D A E+ M PN +
Sbjct: 387 LATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLR 446
Query: 111 -----------VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG 159
VSWT++I G ++++ F EM QD + P+ T+ +L +C L
Sbjct: 447 QIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLA 506
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
L+ GK++H F ++ G V V+ +L++MYAK G AK VF ++ KN
Sbjct: 507 LLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKN--------- 557
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
+V N+M+ G + +G EA +F +M + S LKPD
Sbjct: 558 ----------------------LVCCNAMLTGLAVHGQAHEAAALFHDMWR-SGLKPDGI 594
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFD-ATGPVGN---ALISCYAKVGGVEIAQKI 335
T + L+AC + L + Y+ E P ++ A+ G ++ A
Sbjct: 595 TFTALLTAC---RSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLDEAMAF 651
Query: 336 VEQS----GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
+E+S G S + + G + + + AR +F L + + AM+ YEQ+
Sbjct: 652 IERSPAEPGASSWGALLTGCAIHGNLDLAE-SAARHLF-KLEPHNSANYLAMMSLYEQHQ 709
Query: 392 LNKDAVELFRSMVREG 407
+ +A L +M G
Sbjct: 710 MFDEAESLKYAMKARG 725
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 374/662 (56%), Gaps = 17/662 (2%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H +IK L++++ N+L++ Y K S+ AKKV +MP + +WN++++A A
Sbjct: 178 LGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACA 237
Query: 91 KQGRLDLACEVFNLMPNRDS-----VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
G + A E M + D VSW+ +I + + G + AI M M + ++P
Sbjct: 238 ANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNA 297
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
T+ VL +C L L GK++H ++ + V N+L+++Y + GD A +F
Sbjct: 298 QTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLK 357
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEA 261
+KNV S N ++ + SG + A+ FD M IER +++WNS+I+GY +N EA
Sbjct: 358 FSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEA 417
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
MF NML + ++PD FTL S L+ACA+ L+ GK+IHA I + VG AL+
Sbjct: 418 FSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVE 477
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----DV 377
Y+K + AQ ++ + +V + L+ GY + I + + + ++ ++
Sbjct: 478 MYSKCQDLTAAQVAFDE--VMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNI 535
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
W ++L G +N ++LF M +P+ YT+ +L S LA+L+ GKQ HA
Sbjct: 536 YTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAH 595
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+++ G + + + AL+ MY+K G++ A+ ++ I VS +M+ A A HG GEE
Sbjct: 596 SIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRIS-NPNLVSHNAMLTACAMHGHGEE 654
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
I LF+ ML LG PDH+T++ VL++C H G VE G ++++M + +KPT H+ SMV
Sbjct: 655 GISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLM-GYYNVKPTLKHYTSMV 713
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLL R+G L EAY I+ MP+E D V WG+LL C H N++LG+IAAE+L+ +EP+NSG
Sbjct: 714 DLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSG 773
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L NL++ +W D A +R MK G+ K+ G SW++ +N++H F D H + +
Sbjct: 774 NYVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEE 833
Query: 678 IY 679
IY
Sbjct: 834 IY 835
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 201/691 (29%), Positives = 327/691 (47%), Gaps = 106/691 (15%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA +L S + P +GK VHA IK G F+ L+ YA+
Sbjct: 65 YASVLDS---CKCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARC-------------- 107
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
G L A +F MP R+ SW I+ Y + G F+ A +F
Sbjct: 108 -----------------GLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQV 150
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ D V F V +C+ LG + G+++H V+K + V+N+L++MY K G
Sbjct: 151 LQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGS 210
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD-----VVTWNSMIA 250
AK V M ++ +WN V++ +G + A ++M D VV+W+++I
Sbjct: 211 LDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIG 270
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
G++QNGYD EA+ M M + L P+ TLA L ACA L++L LGKQ+H YI R +F
Sbjct: 271 GFAQNGYDEEAIEMLFRM-QVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFI 329
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ V NAL+ Y + G + A KI + S NV++ T++ GY + GD+ A+ +FD
Sbjct: 330 SNPVVVNALVDVYRRCGDMGGAAKIFLK--FSVKNVLSCNTMIVGYCESGDVSKAKELFD 387
Query: 371 SLR----DRDVVAWTAMLVGYEQNGLNKDAVELFRSMV-REGPKPNNYTLSAMLSVSSSL 425
+ +R +++W +++ GY +N + +A +F++M+ EG +P+++TL ++L+ +
Sbjct: 388 CMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADT 447
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH----------- 474
SL GK+IHA A+ G S V AL+ MYSK ++ AA+ F+ +
Sbjct: 448 ISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALI 507
Query: 475 -----------------------WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+ +W S++ L ++ + +QLF M ++
Sbjct: 508 SGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLR 567
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK---PTPSHF-ASMVDLLGRAGLL- 566
PD T +L AC+ +E+G++ + H IK T H A++VD+ + G L
Sbjct: 568 PDIYTVGIILPACSRLATLERGKQ-----AHAHSIKCGYDTDVHIGAALVDMYAKCGSLK 622
Query: 567 --QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE--PDNSGAYSAL 622
Q AY+ I N P++V+ ++L+AC +H + + G + +L + PD+ S L
Sbjct: 623 YAQLAYDRISN----PNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVL 678
Query: 623 CNLYSSC---GKWEDAANIRKSMKYVGVKKT 650
SSC G E M Y VK T
Sbjct: 679 ----SSCVHVGSVETGCEFFDLMGYYNVKPT 705
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 148/333 (44%), Gaps = 74/333 (22%)
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
++L + L K+ AS L +C + KLGKQ+HA+ I+T FDA G + L+ YA+
Sbjct: 53 SLLDNKPLNTSKY--ASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARC 107
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G +K D +F+++ R++ +W A+L
Sbjct: 108 G----------------------------LLKDADF-----LFETMPMRNLHSWKAILSV 134
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y +GL ++A LF+ + +G + + + + S L S++ G+Q+H ++ +
Sbjct: 135 YLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLN 194
Query: 447 LSVSNALITMYSKAGNINAARRVF------NLIHWRQ----------------------- 477
+ VSNALI MY K G+++ A++V + + W
Sbjct: 195 IYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKS 254
Query: 478 ------ETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVE 531
VSW+++I AQ+G EEAI++ RM G+ P+ T GVL AC ++
Sbjct: 255 LDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLD 314
Query: 532 QGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
G++ + + H P ++VD+ R G
Sbjct: 315 LGKQLHGYITR-HDFISNPVVVNALVDVYRRCG 346
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/636 (35%), Positives = 363/636 (57%), Gaps = 36/636 (5%)
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L C SA ++HS ++K G ++N+LL++Y K G ++ +A+
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCG--LIPQAL--------- 58
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
FD+M RD V+W S++ +++ L M M
Sbjct: 59 --------------------QLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTH 98
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L+PD F A + AC++L L+LGKQ+HA + + F V ++LI Y K G +
Sbjct: 99 DGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDD 158
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+ + + I + N +++T+++ GY + G A +F R++ +WTA++ G Q+G
Sbjct: 159 ARAVFDS--ILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSG 216
Query: 392 LNKDAVELFRSMVREGPK-PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ LF M REG + LS+++ ++LA L+ GKQIH + G S L +S
Sbjct: 217 HGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFIS 276
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+ MY+K +I AA+ +F + R++ +SWTS+IV AQHG EEA+ L++ M+ I
Sbjct: 277 NALVDMYAKCSDILAAKDIFYRMP-RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRI 335
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T+VG+L AC+H GLV +G+ + M + I P+ H+ ++DLL R+G L EA
Sbjct: 336 KPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAE 395
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
N ++ +P +PD W SLLSAC H NL++G A+++L ++P++ Y L N+Y+
Sbjct: 396 NLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAE 455
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV-EDWLHPQRDAIYNKMAKIWDEI 689
W + +RK M + V+K G+S + VF E HP ++ I N + + E+
Sbjct: 456 MWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEM 515
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
++ G+VP+T+ VL+D+E+ KE+ L HSE+LA+A+GL+ T +RI+KNLR+C DCH
Sbjct: 516 RKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCH 575
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +KFI +V REI+VRDATR+HHFK+G CSC D+W
Sbjct: 576 NVLKFISDIVKREIMVRDATRYHHFKEGKCSCNDFW 611
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 242/506 (47%), Gaps = 69/506 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ H LQ + ++ +H++IIK G F K+SL++
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAG-----FDKSSLLS------------------- 41
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
NT+L Y K G + A ++F+ MPNRD VSW +I+ +N+ + + M
Sbjct: 42 -------NTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNT 94
Query: 136 M-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M D + P F ++ +C++LG L GK+VH+ + + V +SL++MY K G
Sbjct: 95 MFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCG 154
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+AVFD + KN SW ++S + SGR A F Q R++ +W ++I+G Q
Sbjct: 155 QPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQ 214
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G+ + +F M ++ D L+S + CANL L+LGKQIH +I F++
Sbjct: 215 SGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLF 274
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ NAL+ YAK DI A+ IF +
Sbjct: 275 ISNALVDMYAKC---------------------------------SDILAAKDIFYRMPR 301
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+DV++WT+++VG Q+G ++A+ L+ MV KPN T +L S + G+++
Sbjct: 302 KDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGREL 361
Query: 435 HASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
S + SL L+ + S++G+++ A + + I ++ + +W S++ A +H
Sbjct: 362 FRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHN 421
Query: 494 LGEEAIQLFERMLELGIKP-DHITYV 518
E +++ +R+L+L KP D TY+
Sbjct: 422 NLEMGVRIADRVLDL--KPEDPSTYI 445
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/645 (36%), Positives = 344/645 (53%), Gaps = 77/645 (11%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGL-----SGCVNVTNSLLNMYAKVGDEMMAKA 201
++T ++ C G G+ +H V G +G + V+NSL +MYAK G
Sbjct: 66 SLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFG------- 118
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGY-SQNGYDFE 260
LD A FD M R+VVTW +++A S +G E
Sbjct: 119 ------------------------LLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQE 154
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL M +D + P+ +T +S L AC L +HA ++ D+
Sbjct: 155 ALRFLVAMRRDG-VAPNAYTFSSVLGACTTPGMLT---AVHASTVKAGLDS--------- 201
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
+V ++L+D Y+K+GD+ RR+FD + RD+V W
Sbjct: 202 ------------------------DVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
+++ G+ Q+G A+ELF M G N TL+++L + + L+ G+Q+HA L+
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297
Query: 441 SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
L + NAL+ MY K G++ A +F+ + R + +SW++M+ LAQ+G EA++
Sbjct: 298 YDR--DLILHNALLDMYCKCGSLEDADALFHRMPQR-DVISWSTMVSGLAQNGKSVEALR 354
Query: 501 LFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLL 560
+F+ M G+ P+H+T VGVL AC+H GLVE G Y+ MK + I+P H MVDLL
Sbjct: 355 VFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLL 414
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYS 620
GRAG L EA FI M LEPD V W +LL ACR+HKN L AA ++L +EPD+ GA
Sbjct: 415 GRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARV 474
Query: 621 ALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYN 680
L N Y+ +W DA K+M+ G++K G SW++++ +VHVF D HP D I
Sbjct: 475 LLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQ 534
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
++ ++ IK +G+VP T VL D+ + KE +L++HSEK+AI FG + + +RIMK
Sbjct: 535 ELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMK 594
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLR+C DCH+ K + K R IV+RD RFHHF+ G CSC DYW
Sbjct: 595 NLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 187/398 (46%), Gaps = 75/398 (18%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN 107
+F+ NSL + YAK + A ++FD MPV+ + +W T+++A A
Sbjct: 104 LFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASAD-------------- 149
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
GR + A+R V M +D V P +T +SVL +CT G L+A V
Sbjct: 150 ----------------GRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLTA---V 190
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H+ VK GL V V +SL++ Y K+GD + VFD M
Sbjct: 191 HASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEM--------------------- 229
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+ RD+V WNS+IAG++Q+G A+ +F M KD+ ++ TL S L A
Sbjct: 230 ----------VTRDLVVWNSIIAGFAQSGDGVGAIELFMRM-KDAGFSSNQGTLTSVLRA 278
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C + L+ G+Q+HA++++ + D + NAL+ Y K G +E A + + + +VI
Sbjct: 279 CTGMVMLEAGRQVHAHVLKYDRDLI--LHNALLDMYCKCGSLEDADALFHR--MPQRDVI 334
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDV----VAWTAMLVGYEQNGLNKDAVELFRSM 403
+++T++ G + G A R+FD ++ + V V +L GL +D FRSM
Sbjct: 335 SWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSM 394
Query: 404 VRE-GPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASAL 439
R G +P + M+ + LD + IH +L
Sbjct: 395 KRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSL 432
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 65/263 (24%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
P + VHA +K GL VF+++SL++ Y K + ++VFDEM + L WN+I++
Sbjct: 183 TPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIA 242
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+A+ G D V AI +F+ M Q T
Sbjct: 243 GFAQSG---------------DGV----------------GAIELFMRMKDAGFSSNQGT 271
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+TSVL +CT + L AG++VH+ V+K + + N+LL+MY K G A A+F M
Sbjct: 272 LTSVLRACTGMVMLEAGRQVHAHVLKYDRD--LILHNALLDMYCKCGSLEDADALFHRMP 329
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++V SW ++M++G +QNG EAL +F +
Sbjct: 330 QRDVISW-------------------------------STMVSGLAQNGKSVEALRVF-D 357
Query: 268 MLKDSSLKPDKFTLASTLSACAN 290
++K + P+ T+ L AC++
Sbjct: 358 LMKSQGVAPNHVTMVGVLFACSH 380
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 409 KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-----ASSLSVSNALITMYSKAGNI 463
+ + +L+ ++ + + DHG+ IH G A L VSN+L +MY+K G +
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQ-HGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A R+F+ + R V+WT+++ ALA G +EA++ M G+ P+ T+ VL
Sbjct: 121 DDALRMFDGMPVRN-VVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLG 179
Query: 523 ACTHGGLVEQGQRYYNMMKNVH----KIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENM 576
ACT G M+ VH K F +S++D + G L + M
Sbjct: 180 ACTTPG----------MLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEM 229
Query: 577 PLEPDVVAWGSLLSA 591
+ D+V W S+++
Sbjct: 230 -VTRDLVVWNSIIAG 243
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 352/648 (54%), Gaps = 75/648 (11%)
Query: 143 PTQFTVTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P+ T+ L S + L L AG+++H+ +K +V SLL++YAK G
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCG------- 120
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
L A+ FD+M V W ++I Y G EA
Sbjct: 121 ------------------------LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREA 156
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ + N + ++PD FT L+ACA + L G
Sbjct: 157 VHVARNAFANG-MRPDSFTAVRVLTACARIADLATG------------------------ 191
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
E + EQ G++ +V T +D Y+K G++ AR +FD +R +D VAW
Sbjct: 192 --------ETVWRAAEQEGVAQ-SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWG 242
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY NG ++A++LF +M EG KP+ Y ++ LS + L +LD G+Q A+R
Sbjct: 243 AMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ----AIRM 298
Query: 442 GEASSL----SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ + ALI MY+K G+ A VF + +++ + W +MI+ L G +
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKI 357
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A L +M + G+K + T++G+L +CTH GL++ G+RY++ M ++ I P H+ MV
Sbjct: 358 AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMV 417
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLL RAGLLQEA+ +++MP+ + V G+LL C++H+N +L + ++L+L+EP NSG
Sbjct: 418 DLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSG 477
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L N+YS+ G+WEDAA +R MK GV+K SWV+ + KVH F V D HP D
Sbjct: 478 NYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 537
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ E+K MG+ P T V+ DVE++ KE L HHSEKLAIAF L+ T T+R
Sbjct: 538 IYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIR 597
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ KNLRVC+DCH+AIK + ++ REI+VRD RFH F+ G CSC DYW
Sbjct: 598 VTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 191/470 (40%), Gaps = 103/470 (21%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PNP L P+ L+S + +P G+ +HAR +K H + + SL
Sbjct: 66 PNPSHLTIPIA-----LKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSL-------- 112
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
LS YAK G L A VF+ MP+ +V WT +I Y +
Sbjct: 113 -----------------------LSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 149
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G + A+ + + + P FT VL +C + DL+ G+ V + G++ V V
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 209
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ +++Y K G+ A+ VFD MR +D
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMR-------------------------------HKDA 238
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V W +M+ GY+ NG+ EAL +F M + +KPD + +A LSAC L L LG+Q
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 297
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ EF +G ALI YAK G + ++ ++
Sbjct: 298 MVDWDEFLDNPVLGTALIDMYAKCG-----------------------STVEAWV----- 329
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
+F +R +D++ W AM++G G K A L M + G K N+ T +L
Sbjct: 330 -----VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 384
Query: 423 SSLASLDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFN 471
+ + G++ + + S + ++ + S+AG + A ++ +
Sbjct: 385 THTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVD 434
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 408 PKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P++ T+ L +S L L G+Q+HA +L+ ++ V +L+++Y+K G ++ A
Sbjct: 66 PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 125
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+RVF+ + TV WT++I A G EA+ + G++PD T V VLTAC
Sbjct: 126 QRVFDEMP-HPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 184
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G+ + + + + + VDL + G + +A + M D VAWG
Sbjct: 185 IADLATGETVWRAAEQ-EGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RHKDAVAWG 242
Query: 587 SL-----------------------------------LSACRVHKNLDLGKIAAEKLLLI 611
++ LSAC LDLG+ A +
Sbjct: 243 AMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWD 302
Query: 612 E-PDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
E DN +AL ++Y+ CG +A + + M+
Sbjct: 303 EFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR 335
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/639 (35%), Positives = 361/639 (56%), Gaps = 67/639 (10%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +++++C L + KKV ++++ +GL DE +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDP----------------DEYLR------- 169
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
N V+ +H+ G + AR FD+M E+++++WN++I G G FEA +F
Sbjct: 170 --------NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFL 221
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M + S + + + A A L + G+Q+H+ ++T G G+ ++C
Sbjct: 222 MMWQXFSDAGSRM-FVTMIRASAGLGLIFAGRQLHSCSLKT-----GVGGDVFVAC---- 271
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
L+D Y K G I A+ +FD + ++ V W +++ G
Sbjct: 272 ------------------------ALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAG 307
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y +G +++A+ ++ M G K +N+T S ++ + + LASL+H KQ HA +R G
Sbjct: 308 YALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD 367
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ + AL+ +YSK G I A+ VF+++ + +SW ++I HG G EA+++FERML
Sbjct: 368 IVANTALVDLYSKWGRIEDAKHVFDMMP-HKNVISWNALIAGYGNHGRGVEAVEMFERML 426
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G+ P+H+T++ VL+AC++ GL ++G + M HKIKP H+A M++LLGR GLL
Sbjct: 427 HEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLL 486
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
EA+ I++ P +P V W +LL+ACRVHKN +LGK AAEKL + P+ Y L N+Y
Sbjct: 487 DEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIY 546
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ G+ E+AA + +++K G++ SW++I+ + + F D H Q IY K+ ++
Sbjct: 547 NXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELM 606
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
EI + G+VP +L DV+E +E++L +HSEKLAIAFGLI+T + T L+I+++ R+C
Sbjct: 607 LEISKHGYVPQXKFLLPDVDEQ-EERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICG 665
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHSAIK I + REIVVRDA+RFHHFK G CSC DYW
Sbjct: 666 DCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 221/511 (43%), Gaps = 100/511 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K V +I GL +L+N ++ + K + A+++FDEMP K + SWNTI+
Sbjct: 151 KKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDA 210
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G A +F +M W +++ G RMFV M++
Sbjct: 211 GDYFEAFRLFLMM-------WQ----XFSDAGS-----RMFVTMIR-------------- 240
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+ LG + AG+++HS +KTG+ G V V +L++MY+K G A+ VFD M K
Sbjct: 241 -ASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKT-- 297
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
V WNS+IAGY+ +GY EAL M+ M +DS
Sbjct: 298 -----------------------------TVGWNSIIAGYALHGYSEEALSMYYEM-RDS 327
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+K D FT + + CA L L+ KQ HA ++R F AL+ Y+K G +E A
Sbjct: 328 GVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDA 387
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
+ + FD + ++V++W A++ GY +G
Sbjct: 388 KHV---------------------------------FDMMPHKNVISWNALIAGYGNHGR 414
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+AVE+F M+ EG PN+ T A+LS S D G +I S R + ++ A
Sbjct: 415 GVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYA 474
Query: 453 -LITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+I + + G ++ A + ++ W +++ A H E E++ G+
Sbjct: 475 CMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKL--YGMG 532
Query: 512 PDHIT-YVGVLTACTHGGLVEQGQRYYNMMK 541
P+ ++ YV +L G +E+ +K
Sbjct: 533 PEKLSNYVVLLNIYNXSGRLEEAAAVIQTLK 563
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 164/333 (49%), Gaps = 38/333 (11%)
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EAL +F + + + D T + +SAC L+ ++ K++ Y+I + D + N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ + K G + A+++ ++ + N++++ T++ G + GD A R+F ++
Sbjct: 173 LLMHVKCGMMIDARRLFDE--MPEKNILSWNTIIGGLVDAGDYFEAFRLF-------LMM 223
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
W + +F +M+R S+ L + G+Q+H+ +L
Sbjct: 224 WQX---------FSDAGSRMFVTMIR---------------ASAGLGLIFAGRQLHSCSL 259
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
++G + V+ ALI MYSK G+I A+ VF+ + + TV W S+I A HG EEA+
Sbjct: 260 KTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMP-EKTTVGWNSIIAGYALHGYSEEAL 318
Query: 500 QLFERMLELGIKPDHITYVGVLTACTHGGLVEQG-QRYYNMMKNVHKIKPTPSHFASMVD 558
++ M + G+K D+ T+ ++ C +E Q + ++++ + + ++VD
Sbjct: 319 SMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN--TALVD 376
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
L + G +++A + + MP +V++W +L++
Sbjct: 377 LYSKWGRIEDAKHVFDMMP-HKNVISWNALIAG 408
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 39/351 (11%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +H+ +K G+ VF+ +L++ Y+K SI
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIE------------------------ 284
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
D C VF+ MP + +V W +II Y G + A+ M+ EM V FT +
Sbjct: 285 ------DAQC-VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFS 337
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C L L K+ H+ +V+ G + +L+++Y+K G AK VFD M K
Sbjct: 338 IIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHK 397
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMF 265
NV SWN +++ + + GR A F++M+ + VT+ ++++ S +G +F
Sbjct: 398 NVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIF 457
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+M +D +KP A + L + L + A I F T + AL++
Sbjct: 458 ESMSRDHKIKPRAMHYACMIEL---LGREGLLDEAFALIKDAPFKPTVNMWAALLTACRV 514
Query: 326 VGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
E+ + E+ G+ + + LL+ Y G + A + +L+ R
Sbjct: 515 HKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRR 565
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/524 (41%), Positives = 302/524 (57%), Gaps = 37/524 (7%)
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
M++ ML S+ P+KFT + AC ++ GKQIHA++++ F A G
Sbjct: 81 MYSRMLH-KSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADG---------- 129
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWT 381
+ L+ Y+ + ARR+FD++ RDR+ V+W
Sbjct: 130 -----------------------FSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWN 166
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ Y Q+ +A LF M E + + ++MLS + L +L+ GK IH +S
Sbjct: 167 AMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS 226
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G ++ +I MY K G + A VFN + ++ SW MI LA HG GE AI+L
Sbjct: 227 GIELDSKLATTVIDMYCKCGCLEKASEVFNELP-QKGISSWNCMIGGLAMHGKGEAAIEL 285
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + PD IT+V VL+AC H GLVE+G+ Y+ M V +KP HF MVDLLG
Sbjct: 286 FKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLG 345
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAGLL+EA I MP+ PD G+L+ ACR+H N +LG+ +K++ +EP NSG Y
Sbjct: 346 RAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVL 405
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY+S G+WED A +RK M GVKK GFS ++ ++ V F HPQ IY K
Sbjct: 406 LANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAK 465
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ +I + I+ +G+VPDT VLHD++E+ KE L +HSEKLAIAFGL+ T TLRI KN
Sbjct: 466 LDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKN 525
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LR+C DCH A K I K+ DREI++RD RFHHF+ G CSC+DYW
Sbjct: 526 LRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 161/387 (41%), Gaps = 72/387 (18%)
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+N I M+ M+ V P +FT ++ +C + GK++H+ V+K G N+L
Sbjct: 76 RNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNL 135
Query: 187 LNMYAKVGDEMMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
++MY A+ VFD M R +N SWN +++ ++ S RL A A FD+M +VV
Sbjct: 136 IHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVL 195
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
DKF AS LSAC L L+ GK IH YI
Sbjct: 196 --------------------------------DKFVAASMLSACTGLGALEQGKWIHGYI 223
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
++ + + +I Y K G +E A +
Sbjct: 224 EKSGIELDSKLATTVIDMYCKCGCLEKASE------------------------------ 253
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSS 424
+F+ L + + +W M+ G +G + A+ELF+ M RE P+ T +LS +
Sbjct: 254 ---VFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 310
Query: 425 LASLDHGK---QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
++ GK Q L G + ++ + +AG + AR++ N + +
Sbjct: 311 SGLVEEGKHYFQYMTEVL--GLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGV 368
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLEL 508
+++ A HG E Q+ ++++EL
Sbjct: 369 LGALVGACRIHGNTELGEQIGKKVIEL 395
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 81/424 (19%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+SP +F Y L+++ GK +HA ++K G F N+L++ Y +S+ A+
Sbjct: 90 VSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQAR 149
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD--SVSWTTIIVTYNEIGRF 126
+VFD MP RD SVSW +I Y + R
Sbjct: 150 RVFDN-------------------------------MPQRDRNSVSWNAMIAAYVQSNRL 178
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
A +F M + V+ +F S+L++CT LG L GK +H ++ K+G+ + ++
Sbjct: 179 HEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTV 238
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV-SLHIHS---GRLDLARAQFDQMIERDV 242
++MY K G A VF+ + K +SSWN ++ L +H ++L + +M+ D
Sbjct: 239 IDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDG 298
Query: 243 VTWNSMIAGYSQNG----------YDFEALGMFANM----------------------LK 270
+T+ ++++ + +G Y E LG+ M +
Sbjct: 299 ITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLIN 358
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG--- 327
+ + PD L + + AC +LG+QI +I E +G L + YA G
Sbjct: 359 EMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRY-VLLANLYASAGRWE 417
Query: 328 GVEIAQKIVEQSGISY---LNVIAFTTLLDGYIKIGDIGP-ARRIFDSLRDRDVVAWTAM 383
V +K++ G+ ++I + +D +I G P A+ I+ L D + T
Sbjct: 418 DVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKL---DEILETIR 474
Query: 384 LVGY 387
+GY
Sbjct: 475 SIGY 478
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 3/211 (1%)
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY + L ++ + ++ M+ + PN +T ++ +++ GKQIHA L+ G +
Sbjct: 68 GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA 127
Query: 446 SLSVSNALITMYSKAGNINAARRVF-NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
N LI MY ++ ARRVF N+ + +VSW +MI A Q EA LF+R
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M + D +L+ACT G +EQG+ + ++ I+ +++D+ + G
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK-SGIELDSKLATTVIDMYCKCG 246
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
L++A +P + + +W ++ +H
Sbjct: 247 CLEKASEVFNELP-QKGISSWNCMIGGLAMH 276
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/595 (37%), Positives = 342/595 (57%), Gaps = 36/595 (6%)
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G ++ A+ G+ + + ++ ++ H R AR FD++ + V +M +G
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 254 QNGYDFEALGMFANMLKDSSLKP-DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT 312
+N + L +F +M+ S D+ LSA A + + IHA + + D
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226
Query: 313 GPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL 372
V N +I YAK GG D+G AR++FD +
Sbjct: 227 TGVANTIIDAYAKGGG-------------------------------HDLGAARKLFD-M 254
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP--KPNNYTLSAMLSVSSSLASLDH 430
DRDVV+W M+ Y QNGL+ +A+ L+ M+ G + N TLSA+L + ++
Sbjct: 255 MDRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQT 314
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GK+IH +R G ++ V +++ MYSK G + A + F I + +SW++MI
Sbjct: 315 GKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKN-ILSWSAMIAGYG 373
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG G+EA+ +F M + G+KP++IT++ VL AC+H GL+ +G+ +YN MK I+P
Sbjct: 374 MHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGV 433
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+ MVDLLGRAG L EAY I+ M ++PD WG+LLSACR++KN++L KI AE+L
Sbjct: 434 EHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFE 493
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
++ NSG Y L N+Y+ G W++ +R +K G++K G+S V+++ K H+F V D
Sbjct: 494 LDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDK 553
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
HPQ IY + K+ + I + G+VP+T SVLHD++ + +E MLR HSEKLA+AF L+++
Sbjct: 554 SHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNS 613
Query: 731 PENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + + ++KNLRVC DCH+AIK I KL REI++RD RFHHFK GLCSC DYW
Sbjct: 614 VQGSVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 120/231 (51%), Gaps = 38/231 (16%)
Query: 83 NTILSAYAKQGRLDL--ACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM--VQ 138
NTI+ AYAK G DL A ++F++M +RD VSW T+I Y + G A+ ++ +M V
Sbjct: 231 NTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVG 289
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V T+++VL +C G + GK++H+ VV+ GL V V S+++MY+K G M
Sbjct: 290 GDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEM 349
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A F ++ KN+ SW ++MIAGY +GY
Sbjct: 350 AWKAFQKIKGKNILSW-------------------------------SAMIAGYGMHGYG 378
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
EAL +F +M K S LKP+ T + L+AC++ L G+ + ++TEF
Sbjct: 379 QEALHVFTDMRK-SGLKPNYITFITVLAACSHAGLLSEGRYWYN-TMKTEF 427
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 95/212 (44%), Gaps = 33/212 (15%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H ++++ GL +V++ S+++ Y+K + A K F ++ K + SW+ +++ Y
Sbjct: 315 GKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGM 374
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G Y + A+ +F +M + + P T +V
Sbjct: 375 HG--------------------------YGQ-----EALHVFTDMRKSGLKPNYITFITV 403
Query: 152 LASCTALGDLSAGKK-VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
LA+C+ G LS G+ ++ + G+ V ++++ + G A + M++K
Sbjct: 404 LAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 463
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ + W ++S ++LA+ +++ E D
Sbjct: 464 DAALWGALLSACRIYKNVELAKICAERLFELD 495
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/752 (33%), Positives = 393/752 (52%), Gaps = 82/752 (10%)
Query: 41 KCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV----KTLCSWNTILSAYAKQGRLD 96
K G+ +S + L + S+S+ + + D M + ++ N +L Y + L+
Sbjct: 76 KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLE 135
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
A ++F+ M ++VS TT+I Y E G A+ +F M+ P T++L S
Sbjct: 136 DADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLV 195
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
L G+++H+ V++ GL ++ ++NMY K G + AK VF
Sbjct: 196 NPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF------------- 242
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
DQM + V ++ GY+Q G +AL +F +++ + ++
Sbjct: 243 ------------------DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEW 283
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D F + L ACA+LE+L LGKQIHA + + ++ VG
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG-------------------- 323
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
T L+D YIK A R F +R+ + V+W+A++ GY Q ++A
Sbjct: 324 -------------TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 397 VELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALIT 455
V+ F+S+ + N++T +++ S LA + G Q+HA A++ S +ALIT
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 430
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
MYSK G ++ A VF + + V+WT+ I A +G EA++LFE+M+ G+KP+ +
Sbjct: 431 MYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 489
Query: 516 TYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIEN 575
T++ VLTAC+H GLVEQG+ + M + + PT H+ M+D+ R+GLL EA F++N
Sbjct: 490 TFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKN 549
Query: 576 MPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
MP EPD ++W LS C HKNL+LG+IA E+L ++P+++ Y NLY+ GKWE+A
Sbjct: 550 MPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEA 609
Query: 636 ANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV 695
A + K M +KK SW+Q + K+H F V D HPQ IY K+ K +D GF+
Sbjct: 610 AEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKL-KEFD-----GFM 663
Query: 696 PDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPEN--TTLRIMKNLRVCNDCHSAIK 753
+ E +EQ+L HSE+LAIAFGLIS N +++ KNLR C DCH K
Sbjct: 664 EGDMFQCNMTER--REQLL-DHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAK 720
Query: 754 FICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ + EIV+RD+ RFHHFK+G CSC DYW
Sbjct: 721 HVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 208/498 (41%), Gaps = 103/498 (20%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
P Y LL+S + R G+ +HA +I+ GL + ++ ++N Y K + AK+VF
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
D+M VK V+ T ++V Y + GR ++A++
Sbjct: 243 DQMAVKK-------------------------------PVACTGLMVGYTQAGRARDALK 271
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYA 191
+FV++V + V F + VL +C +L +L+ GK++H+ V K GL V+V L++ Y
Sbjct: 272 LFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYI 331
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K A F +R N SW+ ++S G
Sbjct: 332 KCSSFESACRAFQEIREPNDVSWSAIIS-------------------------------G 360
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA 311
Y Q EA+ F ++ ++ + FT S AC+ L +G Q+HA I+
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 312 TGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDS 371
+ +ALI+ Y+K G ++ A ++ E + +++A+T + G+ G+ A R
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFE--SMDNPDIVAWTAFISGHAYYGNASEALR---- 474
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
LF MV G KPN+ T A+L+ S ++ G
Sbjct: 475 ---------------------------LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 432 KQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
K + LR A ++ + +I +Y+++G ++ A + + + + +SW +
Sbjct: 508 KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 491 QHG-------LGEEAIQL 501
H GEE QL
Sbjct: 568 THKNLELGEIAGEELRQL 585
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A E + M + G ++Y+ + L SL HG+ +H E S+ + N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY + ++ A ++F+ + VS T+MI A A+ G+ ++A+ LF ML G KP
Sbjct: 126 QMYCECRSLEDADKLFDEMS-ELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP----TPSHFASMVDLLGRAGLLQEAY 570
Y +L + + ++ G++ + H I+ S +V++ + G L A
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIH-----AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+ M ++ V G ++ + + D K+
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKL 272
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/622 (36%), Positives = 353/622 (56%), Gaps = 68/622 (10%)
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
K+VH+ V TG+ + V N LL M AK D +V+ H+
Sbjct: 20 KQVHAQVTTTGIIHDLIVANKLLYMCAKHKD---------------------LVTAHL-- 56
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE-ALGMFANMLKDSSLKPDKFTLAS 283
F++M ERD V+W+ MI G+ +NG D+E F +++ S KPD F+L
Sbjct: 57 --------LFNKMEERDPVSWSVMIGGFVKNG-DYERCFQTFRELIRAGS-KPDNFSLPF 106
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+ AC + L +G+ IH+ +++ N L +
Sbjct: 107 VIKACRDTMGLIMGRLIHSTVLK----------NGL-----------------------H 133
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
L+ +TL+D Y K G I A+++FD + +D+V T M+ GY + G ++ LF M
Sbjct: 134 LDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQM 193
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNI 463
R+G P+ + +++ + L +++ + +H + + + A+I MY+K G+I
Sbjct: 194 RRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSI 253
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA 523
+++R +F+ + ++ +SW++MI A HG G EA++LF ML GI P+ IT++ +L A
Sbjct: 254 DSSREIFDRME-QKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYA 312
Query: 524 CTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
C+H GLV+ G + +++M + ++P H+ MVDLLGRAG L +A IENM +E D
Sbjct: 313 CSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEG 372
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
W + L ACR+H+ +DL + AA+ LL ++ N G Y L N+Y++ G+W+D A IR M
Sbjct: 373 IWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMA 432
Query: 644 YVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLH 703
+KK G++W+++ N ++ FG D H + + IY + + +++ G+VPDT SVLH
Sbjct: 433 KRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLH 492
Query: 704 DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREI 763
DV+E+VK +L HSEKLAIAFGLI+TP+ T +RI KNLRVC DCHS K + + R+I
Sbjct: 493 DVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDI 552
Query: 764 VVRDATRFHHFKKGLCSCRDYW 785
+VRDA RFHHFK+G+CSC DYW
Sbjct: 553 IVRDANRFHHFKEGICSCGDYW 574
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 187/424 (44%), Gaps = 69/424 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +L AK L A +FN M RD VSW+ +I + + G ++ + F E+++
Sbjct: 39 NKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSK 98
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P F++ V+ +C L G+ +HS V+K GL V ++L++MYAK G AK +
Sbjct: 99 PDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQL 158
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M K++ + V MIAGY++ G E+
Sbjct: 159 FDRMPKKDLVTRTV-------------------------------MIAGYAECGKPNESW 187
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M +D + PDK + + ++ACA L + + +H Y+ + +G A+I
Sbjct: 188 VLFDQMRRDGFV-PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDM 246
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G ++ +R IFD + ++V++W+A
Sbjct: 247 YAKCGSID---------------------------------SSREIFDRMEQKNVISWSA 273
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA-SALRS 441
M+ Y +G ++A+ELF M+ G PN T ++L S +D G Q+ + ++
Sbjct: 274 MIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSY 333
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEA 498
G + ++ + +AG ++ A R+ + ++ W + + A H L E+A
Sbjct: 334 GVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKA 393
Query: 499 IQLF 502
+L
Sbjct: 394 AKLL 397
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 63/270 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+L+H+ ++K GLHL F+ CS T++ YA
Sbjct: 119 MGRLIHSTVLKNGLHLDNFV-----------------------------CS--TLVDMYA 147
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
K G +D A ++F+ MP +D V+ T +I Y E G+ + +F +M +D +P + + +
Sbjct: 148 KCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVT 207
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C LG ++ + VH +V S V + ++++MYAK G ++ +FD M KN
Sbjct: 208 IVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKN 267
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V ++W++MI Y +G EAL +F ML
Sbjct: 268 V-------------------------------ISWSAMIGAYGYHGQGREALELFHMML- 295
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+S + P++ T S L AC++ + G Q+
Sbjct: 296 NSGIIPNRITFISLLYACSHAGLVDDGLQL 325
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 352/648 (54%), Gaps = 75/648 (11%)
Query: 143 PTQFTVTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P+ T+ L S + L L AG+++H+ +K +V SLL++YAK G
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCG------- 575
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
L A+ FD+M V W ++I Y G EA
Sbjct: 576 ------------------------LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREA 611
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ + N + ++PD FT L+ACA + L G
Sbjct: 612 VHVARNAFANG-MRPDSFTAVRVLTACARIADLATG------------------------ 646
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
E + EQ G++ +V T +D Y+K G++ AR +FD +R +D VAW
Sbjct: 647 --------ETVWRAAEQEGVAQ-SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWG 697
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY NG ++A++LF +M EG KP+ Y ++ LS + L +LD G+Q A+R
Sbjct: 698 AMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ----AIRM 753
Query: 442 GEASSL----SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ + ALI MY+K G+ A VF + +++ + W +MI+ L G +
Sbjct: 754 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKI 812
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A L +M + G+K + T++G+L +CTH GL++ G+RY++ M ++ I P H+ MV
Sbjct: 813 AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMV 872
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLL RAGLLQEA+ +++MP+ + V G+LL C++H+N +L + ++L+L+EP NSG
Sbjct: 873 DLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSG 932
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L N+YS+ G+WEDAA +R MK GV+K SWV+ + KVH F V D HP D
Sbjct: 933 NYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 992
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ E+K MG+ P T V+ DVE++ KE L HHSEKLAIAF L+ T T+R
Sbjct: 993 IYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIR 1052
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ KNLRVC+DCH+AIK + ++ REI+VRD RFH F+ G CSC DYW
Sbjct: 1053 VTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 180/431 (41%), Gaps = 102/431 (23%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PNP L P+ L+S + +P G+ +HAR +K H + + SL++ YAK
Sbjct: 521 PNPSHLTIPIA-----LKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCG 575
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ A++VFDEMP + W +++AY G L R++V V N
Sbjct: 576 LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDL------------REAVH-----VARNA 618
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
F N +R P FT VL +C + DL+ G+ V + G++ V V
Sbjct: 619 ---FANGMR-----------PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 664
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ +++Y K G+ A+ VFD MR +D
Sbjct: 665 ATAAVDLYVKCGEMAKAREVFDKMR-------------------------------HKDA 693
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V W +M+ GY+ NG+ EAL +F M + +KPD + +A LSAC L L LG+Q
Sbjct: 694 VAWGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 752
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ EF +G ALI YAK G + ++ ++
Sbjct: 753 MVDWDEFLDNPVLGTALIDMYAKCG-----------------------STVEAWV----- 784
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
+F +R +D++ W AM++G G K A L M + G K N+ T +L
Sbjct: 785 -----VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 839
Query: 423 SSLASLDHGKQ 433
+ + G++
Sbjct: 840 THTGLIQDGRR 850
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 408 PKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P++ T+ L +S L L G+Q+HA +L+ ++ V +L+++Y+K G ++ A
Sbjct: 521 PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 580
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+RVF+ + TV WT++I A G EA+ + G++PD T V VLTAC
Sbjct: 581 QRVFDEMP-HPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 639
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G+ + + + + + VDL + G + +A + M D VAWG
Sbjct: 640 IADLATGETVWRAAEQ-EGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RHKDAVAWG 697
Query: 587 SL-----------------------------------LSACRVHKNLDLGKIAAEKLLLI 611
++ LSAC LDLG+ A +
Sbjct: 698 AMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWD 757
Query: 612 E-PDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
E DN +AL ++Y+ CG +A + + M+
Sbjct: 758 EFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR 790
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/599 (37%), Positives = 351/599 (58%), Gaps = 46/599 (7%)
Query: 227 LDLARAQFDQMIERDVVT------WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
LD AR F ++ + DV + NS+I GYS G EA+ ++ ML + P+ +T
Sbjct: 76 LDYARKAF-ELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLV-LGVTPNHYT 133
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
LS C + G Q+H +++ + + N LI YA+ G ++ K+ E G
Sbjct: 134 FPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFE--G 191
Query: 341 ISYLNVIAFTTLL-----------------------------DGYIKIGDIGPARRIFDS 371
+S NV+++T+L+ D Y+K G I A+R+FD
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDE 251
Query: 372 LRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG 431
DR++V + +L Y + GL ++A+ + M+++GP+P+ T+ + +S S+ L L +G
Sbjct: 252 CVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYG 311
Query: 432 KQ-----IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
K +H ++G + ++ AL+ M+++ G+ +A +VFN + R + +WT+ I
Sbjct: 312 KVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER-DVSAWTAAI 370
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
+A G GE A LF +ML G+KPD + +V VLTAC+HGG VEQG +++M++ H I
Sbjct: 371 GTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGI 429
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
P H+ MVDLLGRAGLL+EA++ I++MP+EP+ V WGSLL+ACRVHKN+++ AAE
Sbjct: 430 SPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAE 489
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
++ + P +G + L N+Y+S GKW D A +R +++ GV+K G S VQ+ +H F
Sbjct: 490 RINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFT 549
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFG 726
D HP+ I + ++ + G +PD ++VL DV+E KE +L HSEKLAIAFG
Sbjct: 550 SGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFG 609
Query: 727 LISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LI+T + +R++KNLR+C+DCHS K + +REI+VRD RFH F++GLCSC DYW
Sbjct: 610 LIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 214/509 (42%), Gaps = 87/509 (17%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNF---YAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
K +H +I K GL L+N A ES+ YA+K F+ +
Sbjct: 42 KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFE---------------LF 86
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ R D A + N ++I Y+ G + AI ++V M+ V P +T
Sbjct: 87 KEDVRSDDALFMLN-----------SLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFP 135
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL+ CT + G +VH VVK GL V + N L++ YA+ G VF+GM +
Sbjct: 136 FVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER 195
Query: 210 NVSSW-----------------------------NVVVSLHIHSGRLDLARAQFDQMIER 240
NV SW N +V +++ G +D A+ FD+ ++R
Sbjct: 196 NVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDR 255
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
++V +N++++ Y++ G EAL + ML+ +PD+ T+ S +SA A L L GK
Sbjct: 256 NLVLYNTILSNYARQGLAREALAILDEMLQQGP-RPDRVTMLSAISASAQLVDLFYGKVC 314
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H Y + T + G I C ++ T L+D + + G
Sbjct: 315 HGYWVHTYIEKNG------IPCDMRLN----------------------TALVDMFARCG 346
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D A ++F+ + +RDV AWTA + G + A LF M+ +G KP+ +L+
Sbjct: 347 DPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLT 406
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S ++ G I + G + + ++ + +AG + A + + V
Sbjct: 407 ACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV 466
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELG 509
W S++ A H E A ER+ EL
Sbjct: 467 VWGSLLAACRVHKNVEMATYAAERINELA 495
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 39/283 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA- 90
G VH ++K GL VF++N L++FYA+ + + KVF+ M + + SW +++ YA
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR 209
Query: 91 ----------------------------KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
K G +D A +F+ +R+ V + TI+ Y
Sbjct: 210 GDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYAR 269
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK-----VHSFVVKTGLS 177
G + A+ + EM+Q P + T+ S +++ L DL GK VH+++ K G+
Sbjct: 270 QGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIP 329
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+ + +L++M+A+ GD A VF+ M ++VS+W + G + A F+QM
Sbjct: 330 CDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQM 389
Query: 238 ----IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
++ DVV + ++ S G + L +F+ +++D + P
Sbjct: 390 LIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFS-LMEDHGISP 431
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/755 (33%), Positives = 385/755 (50%), Gaps = 90/755 (11%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
L + + G + A ++F M + D+ W II Y G F+ AI + M + +
Sbjct: 65 LCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDN 124
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT V+ +C L L G+KVH ++K G V V N L++MY K+G
Sbjct: 125 FTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIG----------- 173
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
++LA FD+M RD+V+WNSM++GY +G +L F
Sbjct: 174 --------------------FIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCF 213
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
ML+ + K D+F + S L AC+ L+ G +IH +IR+E + V +LI Y K
Sbjct: 214 KEMLRLGN-KADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGK 272
Query: 326 -------------------------VGGVEIAQKIV-------------EQSG------- 340
+GG++ K++ QSG
Sbjct: 273 CGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKS 332
Query: 341 ----------ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+ YL + T L+D Y K G++ A +F+ + ++++V+W M+ Y QN
Sbjct: 333 IHGFAIRKMFLPYL--VLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQN 390
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
K+A+++F+ ++ E KP+ T++++L + LAS GKQIH+ ++ G S+ +S
Sbjct: 391 EQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFIS 450
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NA++ MY+K G++ AR F+ + + + VSW +MI+A A HG G +IQ F M G
Sbjct: 451 NAIVYMYAKCGDLQTAREFFDGMVCK-DVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGF 509
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ T+V +LTAC+ GL+++G ++N MK + I P H+ M+DLLGR G L EA
Sbjct: 510 KPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAK 569
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
FIE MPL P WGSLL+A R H ++ L ++AA +L ++ DN+G Y L N+Y+ G
Sbjct: 570 CFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAG 629
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+WED I+ MK G+ KT G S V I + F +D H + IY+ + + +I
Sbjct: 630 RWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIG 689
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E ++ + +HS KLAI FGLIST + + KN R+C+DCH
Sbjct: 690 EDIYLHSLTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHR 749
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K I ++ REIVV DA FHHF+ G CSCRDYW
Sbjct: 750 AAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 157/626 (25%), Positives = 260/626 (41%), Gaps = 148/626 (23%)
Query: 13 LEFYAHLLQSNLKSRN---PFV------------GKLVHARIIKCGLHLSVFLKNSLMNF 57
++FY + ++S N PFV G+ VH ++IK G L V++ N L++
Sbjct: 109 IDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDM 168
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
Y K G ++LA +VF+ MP RD VSW +++
Sbjct: 169 YLKI-------------------------------GFIELAEKVFDEMPVRDLVSWNSMV 197
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
Y G +++ F EM++ +F + S L +C+ L +G ++H V+++ L
Sbjct: 198 SGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELE 257
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV------------------- 218
+ V SL++MY K G A+ VF+ + KN+ +WN ++
Sbjct: 258 LDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINL 317
Query: 219 --------------SLH-------------IHSGRLDL---------ARAQFDQMIERDV 242
S+H + + +D+ A F+QM E+++
Sbjct: 318 LPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNM 377
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V+WN+M+A Y QN EAL MF ++L + LKPD T+AS L A A L GKQIH+
Sbjct: 378 VSWNTMVAAYVQNEQYKEALKMFQHILNE-PLKPDAITIASVLPAVAELASRSEGKQIHS 436
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
YI++ + + NA++ YAK G D+
Sbjct: 437 YIMKLGLGSNTFISNAIVYMYAKCG---------------------------------DL 463
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
AR FD + +DVV+W M++ Y +G + +++ F M +G KPN T ++L+
Sbjct: 464 QTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTAC 523
Query: 423 SSLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S +D G S + G + ++ + + GN++ A+ +
Sbjct: 524 SISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARI 583
Query: 482 WTSMIVALAQHG---LGEEAIQLFERMLELGIKPDHI-TYVGVLTACTHGGLVEQGQRYY 537
W S++ A H L E A + L +K D+ YV + G E R
Sbjct: 584 WGSLLAASRNHNDVVLAELAARHI-----LSLKHDNTGCYVLLSNMYAEAGRWEDVDRIK 638
Query: 538 NMMKNVHKIKPTPSHFASMVDLLGRA 563
+MK +K SMVD+ GR+
Sbjct: 639 YLMKEQGLVKTVG---CSMVDINGRS 661
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 194/452 (42%), Gaps = 61/452 (13%)
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
N + T L G+++ G +G A +F+ + D W ++ GY NGL ++A++ + M
Sbjct: 57 NDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRME 116
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
EG + +N+T ++ L +L G+++H ++ G + V N LI MY K G I
Sbjct: 117 CEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIE 176
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
A +VF+ + R + VSW SM+ G G ++ F+ ML LG K D + L AC
Sbjct: 177 LAEKVFDEMPVR-DLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGAC 235
Query: 525 THGGLVEQGQRYY-NMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA---YNFI------- 573
+ + G + ++++ ++ S++D+ G+ G + A +N I
Sbjct: 236 SIEHCLRSGMEIHCQVIRSELELDIMVQ--TSLIDMYGKCGKVDYAERVFNRIYSKNIVA 293
Query: 574 ---------ENMPLEPDVVAWGSLLSACRVHKNLDLGK----IAAEKL----LLIEPDNS 616
E+ + PDV+ +LL +C L GK A K+ L++E
Sbjct: 294 WNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLE---- 349
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
+AL ++Y CG+ + A ++ M + +QN+
Sbjct: 350 ---TALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQ-------------- 392
Query: 677 AIYNKMAKIWDEIKEMGFVPDT---ASVLHDVEE-DVKEQMLRHHSEKLAIAFGLISTPE 732
Y + K++ I PD ASVL V E + + + HS + + G +
Sbjct: 393 --YKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFIS 450
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
N + + C D +A +F +V +++V
Sbjct: 451 NAIVYMYAK---CGDLQTAREFFDGMVCKDVV 479
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 352/648 (54%), Gaps = 75/648 (11%)
Query: 143 PTQFTVTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P+ T+ L S + L L AG+++H+ +K +V SLL++YAK G
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCG------- 599
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
L A+ FD+M V W ++I Y G EA
Sbjct: 600 ------------------------LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREA 635
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ + N + ++PD FT L+ACA + L G
Sbjct: 636 VHVARNAFANG-MRPDSFTAVRVLTACARIADLATG------------------------ 670
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
E + EQ G++ +V T +D Y+K G++ AR +FD +R +D VAW
Sbjct: 671 --------ETVWRAAEQEGVAQ-SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWG 721
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY NG ++A++LF +M EG KP+ Y ++ LS + L +LD G+Q A+R
Sbjct: 722 AMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ----AIRM 777
Query: 442 GEASSL----SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ + ALI MY+K G+ A VF + +++ + W +MI+ L G +
Sbjct: 778 VDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKI 836
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A L +M + G+K + T++G+L +CTH GL++ G+RY++ M ++ I P H+ MV
Sbjct: 837 AFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMV 896
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLL RAGLLQEA+ +++MP+ + V G+LL C++H+N +L + ++L+L+EP NSG
Sbjct: 897 DLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSG 956
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L N+YS+ G+WEDAA +R MK GV+K SWV+ + KVH F V D HP D
Sbjct: 957 NYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 1016
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ E+K MG+ P T V+ DVE++ KE L HHSEKLAIAF L+ T T+R
Sbjct: 1017 IYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIR 1076
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ KNLRVC+DCH+AIK + ++ REI+VRD RFH F+ G CSC DYW
Sbjct: 1077 VTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 180/431 (41%), Gaps = 102/431 (23%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PNP L P+ L+S + +P G+ +HAR +K H + + SL++ YAK
Sbjct: 545 PNPSHLTIPIA-----LKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCG 599
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
+ A++VFDEMP + W +++AY G L R++V V N
Sbjct: 600 LLHRAQRVFDEMPHPSTVPWTALITAYMDAGDL------------REAVH-----VARNA 642
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
F N +R P FT VL +C + DL+ G+ V + G++ V V
Sbjct: 643 ---FANGMR-----------PDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 688
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ +++Y K G+ A+ VFD MR +D
Sbjct: 689 ATAAVDLYVKCGEMAKAREVFDKMR-------------------------------HKDA 717
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V W +M+ GY+ NG+ EAL +F M + +KPD + +A LSAC L L LG+Q
Sbjct: 718 VAWGAMVGGYASNGHPREALDLFLAM-QAEGMKPDCYAVAGALSACTRLGALDLGRQAIR 776
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ EF +G ALI YAK G + ++ ++
Sbjct: 777 MVDWDEFLDNPVLGTALIDMYAKCG-----------------------STVEAWV----- 808
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
+F +R +D++ W AM++G G K A L M + G K N+ T +L
Sbjct: 809 -----VFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSC 863
Query: 423 SSLASLDHGKQ 433
+ + G++
Sbjct: 864 THTGLIQDGRR 874
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 408 PKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P++ T+ L +S L L G+Q+HA +L+ ++ V +L+++Y+K G ++ A
Sbjct: 545 PNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRA 604
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+RVF+ + TV WT++I A G EA+ + G++PD T V VLTAC
Sbjct: 605 QRVFDEMP-HPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 663
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G+ + + + + + VDL + G + +A + M D VAWG
Sbjct: 664 IADLATGETVWRAAEQ-EGVAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RHKDAVAWG 721
Query: 587 SL-----------------------------------LSACRVHKNLDLGKIAAEKLLLI 611
++ LSAC LDLG+ A +
Sbjct: 722 AMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWD 781
Query: 612 E-PDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
E DN +AL ++Y+ CG +A + + M+
Sbjct: 782 EFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMR 814
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/547 (39%), Positives = 335/547 (61%), Gaps = 7/547 (1%)
Query: 242 VVTWNSMIAGYSQN---GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGK 298
V +N+ I G+S+ G ++ +F M SL P+ FT C+N LG+
Sbjct: 54 VFLFNTTIRGFSRARRPGSLLSSVLLFVRM-GVLSLAPNNFTFTFLFQGCSNCVAFDLGR 112
Query: 299 QIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK 358
Q H +I+ F+ V N++I Y+ G + A+ + ++S S L+V+++ +++DG I+
Sbjct: 113 QFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDES--SELDVVSWNSMIDGCIR 170
Query: 359 IGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
G+I A +F + +R+ ++W M+ GY QNG K+A+ LFR M +PN+ L ++
Sbjct: 171 NGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSV 230
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
LS S L +LDHG +H + +S ALI MY+K G+I+ A + F+ +++
Sbjct: 231 LSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSR-KRD 289
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
++T+ I LA +G EEA+QLFE+M GI PD ++Y+ VL AC+H G VE+G Y+
Sbjct: 290 VSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFA 349
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M +VH I+P H+A MVDLLGRAGLL+EA F+ +MP++PD V WG+LL ACRV+ N
Sbjct: 350 SMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNA 409
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
++G+ L+ + ++ G Y L N+Y+ K EDA +RK+M+ V + G S +++
Sbjct: 410 EMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEV 469
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
VH F D H + + IY +I EIK+ G+ +T +V+ DVEE+ KE ++ HHS
Sbjct: 470 AGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHS 529
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLA+AFG + T +TLRI+KN+R+C+DCH AIK + K+ R+I +RD FHHF++GL
Sbjct: 530 EKLAVAFGFLYTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGL 589
Query: 779 CSCRDYW 785
CSC+DYW
Sbjct: 590 CSCKDYW 596
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 184/418 (44%), Gaps = 70/418 (16%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G +++ +FV M + P FT T + C+ G++ H V+K V V
Sbjct: 71 GSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVR 130
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
NS++ Y+ G A+ VFD +V SWN ++ I +G + A + F +M ER+ +
Sbjct: 131 NSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDI 190
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+WN MI+GY+QNG EAL +F M + +P+ L S LSAC+ L L G +H Y
Sbjct: 191 SWNMMISGYAQNGQPKEALALFREM-QMLDQEPNSAILVSVLSACSQLGALDHGCWVHCY 249
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I + + ALI YAK G +++A + AF+T
Sbjct: 250 IGKKCVRVDSILSAALIDMYAKCGSIDLAMQ-------------AFST------------ 284
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
R RDV A+TA + G NG +++A++LF M EG P+ + A+L S
Sbjct: 285 --------SRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACS 336
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW-RQETVSW 482
HA + G S+S+ +H R E +
Sbjct: 337 -----------HAGWVEKGFHYFASMSD---------------------VHGIRPELDHY 364
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
M+ L + GL EEA + M IKPD++ + +L AC G E GQR +++
Sbjct: 365 ACMVDLLGRAGLLEEAEKFVASM---PIKPDNVIWGALLGACRVYGNAEMGQRVGSLL 419
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 147/326 (45%), Gaps = 49/326 (15%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ H +IK + VF++NS++ FY+ ++ A+ VFDE + SWN+++
Sbjct: 110 LGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCI 169
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + A +F+ M R+ +SW +I Y + G+ K A+ +F EM P + S
Sbjct: 170 RNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVS 229
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNV----TNSLLNMYAKVGDEMMAKAVFDGM 206
VL++C+ LG L G VH ++ K CV V + +L++MYAK G +A F
Sbjct: 230 VLSACSQLGALDHGCWVHCYIGKK----CVRVDSILSAALIDMYAKCGSIDLAMQAFSTS 285
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
R ++VS++ +S G + NG EAL +F
Sbjct: 286 RKRDVSAYTAAIS-------------------------------GLAMNGCSEEALQLFE 314
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI-----IRTEFDATGPVGNALIS 321
M K + PD + + L AC++ ++ G A + IR E D ++
Sbjct: 315 QM-KGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYA----CMVD 369
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVI 347
+ G +E A+K V I NVI
Sbjct: 370 LLGRAGLLEEAEKFVASMPIKPDNVI 395
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/641 (35%), Positives = 358/641 (55%), Gaps = 68/641 (10%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T +L C L GK+VHS +VK G + + N L+ MY K G
Sbjct: 26 TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGG----------- 74
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER--DVVTWNSMIAGYSQNGYDFEALGM 264
+ AR+ FDQ+ E+ DV++WN +I Y+QNG EAL +
Sbjct: 75 --------------------IAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHL 114
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + + ++ TL + + ACA+L + G+ +HA + ++ VG +L++ +
Sbjct: 115 FKTMDLEGVI-ANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFG 173
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K V+ AR +FDSL +++V W M+
Sbjct: 174 KCKNVD---------------------------------AARAVFDSLPRKNLVTWNNMV 200
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
Y QN K A+++FR M EG +P+ T ++ ++LA+ G+ +H SG
Sbjct: 201 AVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIP 260
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+++ A++ Y K G ++ AR +F+ + ++ TV+W++++ A AQ+G EAI+L+
Sbjct: 261 MDVALGTAVMHFYGKCGRLDNARAIFDSLG-KKNTVTWSAILAAYAQNGYETEAIELYHE 319
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M++ G++ + IT++G+L AC+H G G Y+ M + P H+ +++DLLGR+G
Sbjct: 320 MVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSG 379
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
LQ + + I +MP EPD AW +LL ACR+H ++D G AE + ++P++SG Y L N
Sbjct: 380 QLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSN 439
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAK 684
LYSS G+ ++A RK+M+ G+ K G S ++++++VH F LHPQ I+ ++ +
Sbjct: 440 LYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIER 499
Query: 685 IWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ +KE G+V D +VL DVEE+ KEQ+L +HSE+LAIAFGLISTP T L I+KNLRV
Sbjct: 500 LKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRV 559
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH+A+K I K+V R+IVVRDA RFHHF+ G CSC DYW
Sbjct: 560 CFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 212/527 (40%), Gaps = 96/527 (18%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL+ S+ GK VH+ ++K G + N L+ Y K I+ A+ VFD++
Sbjct: 27 YVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQ 86
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K N D +SW II Y + G K A+ +F
Sbjct: 87 EK-----------------------------NADVISWNGIIGAYTQNGLGKEALHLFKT 117
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V+ Q T+ + + +C +L G+ VH+ V L V SL+NM+ K +
Sbjct: 118 MDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKN 177
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+AVFD + KN +VTWN+M+A YSQN
Sbjct: 178 VDAARAVFDSLPRKN-------------------------------LVTWNNMVAVYSQN 206
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+A+ +F + ++PD T + + ACA L G+ +H I + +
Sbjct: 207 WQCKKAIQVF-RFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G A++ Y K G ++ AR IFDSL +
Sbjct: 266 GTAVMHFYGKCGRLD---------------------------------NARAIFDSLGKK 292
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
+ V W+A+L Y QNG +A+EL+ MV+ G + N T +L S G
Sbjct: 293 NTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYF 352
Query: 436 ASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
S +R G LI + ++G + + + N + + ++ +W +++ A HG
Sbjct: 353 VSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGD 412
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
+ ++ E + EL D Y+ + + G +++ +R M+
Sbjct: 413 VDRGARIAELIYELD-PEDSGPYILLSNLYSSTGRMDEARRTRKAMR 458
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 350/648 (54%), Gaps = 75/648 (11%)
Query: 143 PTQFTVTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P+ T L S + L L AG+++H+ +K +V SLL +YA+ G
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCG------- 167
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
L A+ FD+M V+W ++I Y G EA
Sbjct: 168 ------------------------LLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREA 203
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ + N + ++PD FT L+ACA + L G
Sbjct: 204 VHVARNAFANG-MRPDSFTAVRVLTACARVADLATG------------------------ 238
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
E + EQ GI+ +V T +D Y+K G++ AR +FD +RD+D VAW
Sbjct: 239 --------ETVWRAAEQEGIAQ-SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWG 289
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY NG ++A++LF +M EG +P+ Y ++ LS + L +LD G+Q A+R
Sbjct: 290 AMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ----AIRM 345
Query: 442 GEASSL----SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ + ALI MY+K G+ A VF + +++ + W +MI+ L G +
Sbjct: 346 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKT 404
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A L +M + G+K + T++G+L +CTH GL++ G+RY++ M ++ I P H+ +V
Sbjct: 405 AFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIV 464
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLL RAGLLQEA+ I++MP+ + V G+LL C++H+N +L + +L+ +EP NSG
Sbjct: 465 DLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSG 524
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L N+YS+ G+WEDAA +R MK GV+K SWV+ + KVH F V D HP D
Sbjct: 525 NYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 584
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ E+K MG+ P T V+ DVE++ KE L HHSEKLAIAF L+ T T+R
Sbjct: 585 IYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIR 644
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ KNLRVC+DCH+AIK I ++ REI+VRD RFH F+ G CSC DYW
Sbjct: 645 VTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 200/507 (39%), Gaps = 103/507 (20%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PNP L P+ L+S + +P G+ +HAR +K H + + SL+ YA+
Sbjct: 113 PNPSHLTFPIA-----LKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARC- 166
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
G L A VF+ MP+ +VSWT +I Y +
Sbjct: 167 ------------------------------GLLHRAQRVFDEMPHPSTVSWTALITAYMD 196
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G + A+ + + + P FT VL +C + DL+ G+ V + G++ V V
Sbjct: 197 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 256
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ +++Y K G+ A+ VFD MR ++D
Sbjct: 257 ATAAVDLYVKCGEMAKAREVFDKMR-------------------------------DKDA 285
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V W +M+ GY+ NG+ EAL +F M + ++PD + +A LSAC L L LG+Q
Sbjct: 286 VAWGAMVGGYASNGHPREALDLFLAM-QAEGVRPDCYAVAGALSACTRLGALDLGRQAIR 344
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ EF +G ALI YAK G
Sbjct: 345 MVDWDEFLDNPVLGTALIDMYAKCGST--------------------------------- 371
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +F +R +D++ W AM++G G K A L M + G K N+ T +L
Sbjct: 372 AEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSC 431
Query: 423 SSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ + G++ H + + ++ + S+AG + A ++ + + V
Sbjct: 432 THTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVI 491
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLEL 508
+++ H E A + +++ L
Sbjct: 492 LGALLGGCKIHRNAELAEHVLTQLIRL 518
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 40/273 (14%)
Query: 408 PKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P++ T L +S L L G+Q+HA +L+ ++ V +L+T+Y++ G ++ A
Sbjct: 113 PNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRA 172
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+RVF+ + TVSWT++I A G EA+ + G++PD T V VLTAC
Sbjct: 173 QRVFDEMP-HPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 231
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G+ + + I + + VDL + G + +A + M + D VAWG
Sbjct: 232 VADLATGETVWRAAEQ-EGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RDKDAVAWG 289
Query: 587 SL-----------------------------------LSACRVHKNLDLGKIAAEKLLLI 611
++ LSAC LDLG+ A +
Sbjct: 290 AMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWD 349
Query: 612 E-PDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
E DN +AL ++Y+ CG +A + + M+
Sbjct: 350 EFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMR 382
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/546 (38%), Positives = 342/546 (62%), Gaps = 4/546 (0%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLS-GCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
T+ S+L C L GK+VH + TGL ++N L+NMYAK G E+ A+ VFD
Sbjct: 61 TLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDK 120
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
M +N+ SWN ++S + G + AR FD+M E+DVV+WN+M+ ++Q GY EAL +
Sbjct: 121 MSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFY 180
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+ + ++ + F+ A L+ C L+++ L +Q+H I+ F + + ++++ Y K
Sbjct: 181 SE-FRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVK 239
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G + A+K+ ++ +S +V+A+TT++ GY K GD+ A +F + +++ V+WTA++
Sbjct: 240 CGLMGDARKLFDE--MSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALIS 297
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY +NG+ A+ELF M+ +P+ +T S+ L +S+ASL HGKQIHA LR
Sbjct: 298 GYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQP 357
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
+ V +ALI MYSK G++ R+VF+L+ + + V W ++I ALAQHG GEEAIQ+ + M
Sbjct: 358 NTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDM 417
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGL 565
+ G KPD IT+V +L AC+H GLV+QG ++ M + I P+ H+A ++DLLGRAG
Sbjct: 418 VRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGC 477
Query: 566 LQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
+E + +E MP +PD W +LL CR+H +++LG+ AAE+L+ +EP +S AY L ++
Sbjct: 478 FEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSI 537
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y+ G+WE +R+ M VKK + SW++I+NKVH F V D HP ++ IY+ + ++
Sbjct: 538 YAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQL 597
Query: 686 WDEIKE 691
+++E
Sbjct: 598 AGQMEE 603
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 244/495 (49%), Gaps = 37/495 (7%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
A LLQ SR GK VH + GL FL N L+N YAK A+KVFD+M
Sbjct: 63 ASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMS 122
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ L SWN +LS YAK G + A ++F+ MP +D VSW T+++ + + G + A+R + E
Sbjct: 123 ARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSE 182
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
Q + F+ VL C L ++ ++VH ++ G V +++S+L+ Y K G
Sbjct: 183 FRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGL 242
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A+ +FD M ++V +W +VS + G + A F +M E++ V+W ++I+GY++N
Sbjct: 243 MGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARN 302
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +AL +F M+ ++PD+FT +S L ACA++ LK GKQIHAY++R F V
Sbjct: 303 GMGHKALELFTKMML-FHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIV 361
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
+ALI Y+K G + I R++FD + ++
Sbjct: 362 VSALIDMYSKCGSLGI---------------------------------GRKVFDLMGNK 388
Query: 376 -DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
DVV W ++ Q+G ++A+++ MVR G KP+ T +L+ S + G
Sbjct: 389 LDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNF 448
Query: 435 HAS-ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
S + G S LI + +AG + ++ + W +++ HG
Sbjct: 449 FESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHG 508
Query: 494 LGEEAIQLFERMLEL 508
E + ER++EL
Sbjct: 509 HIELGRKAAERLIEL 523
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 189/367 (51%), Gaps = 35/367 (9%)
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP-VGNA 318
EA+ N+ + L+ D TLAS L CA+ L+ GK++H ++ T G + N
Sbjct: 42 EAVSSLENLAR-RGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNH 100
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI+ YAK G A+K+ ++ +S N+ ++ +L GY K+G I PAR++FD + ++DVV
Sbjct: 101 LINMYAKCGKEVEARKVFDK--MSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVV 158
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+W M++ + Q G +A+ + + G + N ++ + +L+V L + +Q+H
Sbjct: 159 SWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQI 218
Query: 439 LRSGEASSLSVSNALITMYSKAGNINAARRVF------NLIHW----------------- 475
L +G S++ +S++++ Y K G + AR++F +++ W
Sbjct: 219 LVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSAN 278
Query: 476 -------RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGG 528
+ VSWT++I A++G+G +A++LF +M+ ++PD T+ L AC
Sbjct: 279 ELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIA 338
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
++ G++ + + ++ +P ++++D+ + G L + M + DVV W ++
Sbjct: 339 SLKHGKQIHAYLLRIN-FQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTI 397
Query: 589 LSACRVH 595
+SA H
Sbjct: 398 ISALAQH 404
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 31/275 (11%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L +K + + + VH +I+ G +V L +S+++ Y K + A+K+FDEM
Sbjct: 195 FAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMS 254
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + +W T++S YAK G + A E+F MP ++ VSWT +I Y G A+ +F +
Sbjct: 255 ARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTK 314
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M+ V P QFT +S L +C ++ L GK++H+++++ V ++L++MY+K G
Sbjct: 315 MMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGS 374
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ + VFD M K DVV WN++I+ +Q+
Sbjct: 375 LGIGRKVFDLMGNK------------------------------LDVVLWNTIISALAQH 404
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
G EA+ M +M++ S KPDK T L+AC++
Sbjct: 405 GCGEEAIQMLDDMVR-SGAKPDKITFVVILNACSH 438
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 82/192 (42%), Gaps = 8/192 (4%)
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
IV L + EA+ E + G++ D T +L C + +G+R + +K
Sbjct: 31 IVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGL 90
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
+P ++++ + G EA + M ++ +W ++LS + L + K A
Sbjct: 91 KRPGTFLSNHLINMYAKCGKEVEARKVFDKMSAR-NLYSWNNMLSG---YAKLGMIKPAR 146
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN---KV 662
+ + + +++ + ++ CG W++A + +G+ + GFS+ + K+
Sbjct: 147 KLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGI-QCNGFSFAGVLTVCVKL 205
Query: 663 HVFGVEDWLHPQ 674
G+ +H Q
Sbjct: 206 KEVGLTRQVHGQ 217
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 331/563 (58%), Gaps = 7/563 (1%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
SGRLDL+ A + + + + S I +S G+ AL + ++ML L P TL++
Sbjct: 336 SGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLA-QGLLPTAHTLSA 394
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+L AC L G+ +H Y + V AL+ YA+ G A+ + + +
Sbjct: 395 SLPACRGLSP---GRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDM-LPD 450
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+V++ T +L Y +G + AR +FD L +D V W AM+ GY Q+G +A+ LFR M
Sbjct: 451 PHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRM 510
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGN 462
+ G +P+ T+ +LS + L +++ GK +H+ S S+ V ALI MY K G+
Sbjct: 511 LGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGS 570
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ A VF+ I ++ V W +MI A HG +A+++F + E G+ P IT++G+L
Sbjct: 571 LGDAVDVFHGIG-DKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLN 629
Query: 523 ACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
AC+H G+VE+G+ ++ M+ + I P H+ MVDLLGRAGL++EA+ +++M + PD
Sbjct: 630 ACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDA 689
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
V W SLL+ACR+HKN+ LG+ A+ L+ NSG Y L N+Y++ G W + A +R M
Sbjct: 690 VMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMM 749
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
K G++K G S ++I +V+ F D HP+ D IY + K+ +KE G VP T VL
Sbjct: 750 KASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVL 809
Query: 703 HDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDRE 762
HD++E KE+ L HSEKLA+AFGLIST T++I+KNLR C+DCH+ +K I ++ R+
Sbjct: 810 HDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRK 869
Query: 763 IVVRDATRFHHFKKGLCSCRDYW 785
IV RD RFHHF G CSC DYW
Sbjct: 870 IVFRDRNRFHHFVDGSCSCGDYW 892
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 198/407 (48%), Gaps = 38/407 (9%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AYA GRLDL+ + + ++ +T+ I ++ G A+ + +M+ +LPT T
Sbjct: 332 AYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHT 391
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+++ L +C L S G+ +H + K L+G V +LL MYA+ GD A+A+FD M
Sbjct: 392 LSASLPACRGL---SPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDML 448
Query: 208 L-KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+V S +++ + G LD AR+ FD + +D V WN+MI GY+Q+G EAL +F
Sbjct: 449 PDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFR 508
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML S ++PD+ T+ LSA A L ++ GK +H+Y
Sbjct: 509 RMLG-SGVEPDEVTVVLVLSAVAQLGTVESGKWLHSY----------------------- 544
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
V+ S L+V T L+D Y K G +G A +F + D+D+V W AM+ G
Sbjct: 545 ---------VKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMING 595
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEAS 445
Y +G ++ A+E+F +G P + T +L+ S ++ G++ S R G
Sbjct: 596 YAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDP 655
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG I A + + + V W S++ A H
Sbjct: 656 KIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLH 702
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 137/287 (47%), Gaps = 35/287 (12%)
Query: 17 AHLLQSNLKS-RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM- 74
AH L ++L + R G+ +H K L ++ +L+ YA+ + A+ +FD+M
Sbjct: 389 AHTLSASLPACRGLSPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDML 448
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + S +L+ YA G LD A +F+ +P +D V W +I Y + GR A+R+F
Sbjct: 449 PDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFR 508
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNVTNSLLNMYAKV 193
M+ V P + TV VL++ LG + +GK +HS+V + + V V +L++MY K
Sbjct: 509 RMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKC 568
Query: 194 GDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS 253
G A VF G+ ++D+V WN+MI GY+
Sbjct: 569 GSLGDAVDVFHGIG-------------------------------DKDIVVWNAMINGYA 597
Query: 254 QNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+G +AL MF ++ L P T L+AC++ ++ G++
Sbjct: 598 MHGDSRKALEMFVQS-REQGLWPTDITFIGLLNACSHSGMVEEGREF 643
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/755 (31%), Positives = 397/755 (52%), Gaps = 101/755 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GKL H R+ + + + F+ N ++ Y +S + A++ FD++ + L SW TI+SAY +
Sbjct: 99 GKLFHNRLQRMA-NSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTE 157
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+GR+D A+ +F+ M+ ++P +++
Sbjct: 158 EGRID-------------------------------EAVGLFLRMLDLGIIPNFSIFSTL 186
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ S L GK++HS +++ + +++ + NMY K G
Sbjct: 187 IMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCG----------------- 229
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
W LD A ++M + V ++ GY+Q + +AL +F+ M+ +
Sbjct: 230 --W------------LDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISE 275
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++ D F + L ACA L L GKQIH+Y I+ ++ VG L+
Sbjct: 276 -GVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLV----------- 323
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D Y+K AR+ F+S+ + + +W+A++ GY Q+G
Sbjct: 324 ----------------------DFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSG 361
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
A+E+F+++ +G N++ + + S+++ L G QIHA A++ G + LS +
Sbjct: 362 KFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGES 421
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
A+ITMYSK G ++ A + F I + +TV+WT++I A A HG EA++LF+ M G++
Sbjct: 422 AMITMYSKCGKVDYAHQAFLAID-KPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVR 480
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P+ +T++G+L AC+H GLV++G+++ + M + + + PT H+ M+D+ RAGLL EA
Sbjct: 481 PNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALE 540
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
I +MP EPDV++W SLL C +NL++G IAA+ + ++P +S Y + NLY+ GK
Sbjct: 541 VIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGK 600
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W++AA RK M ++K SW+ ++ KVH F V D HPQ + IY+K+ ++ K+
Sbjct: 601 WDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKK 660
Query: 692 -MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
+ + + L D E K+Q+L HSE+LAIA+GLI T +T + + KN R C DCH
Sbjct: 661 GEERLLNEENALCDFTER-KDQLL-DHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHE 718
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K + + RE+VVRD RFHH G CSCRDYW
Sbjct: 719 FAKRVSVVTGRELVVRDGNRFHHINSGECSCRDYW 753
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 163/383 (42%), Gaps = 73/383 (19%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
+ GK +H+ IK GL V + L++FY K A++ F+ + SW+ +++ Y
Sbjct: 298 YTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGY 357
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
+ G+ D A EVF + ++ VL F
Sbjct: 358 CQSGKFDRALEVFKTIRSKG-------------------------------VLLNSFIYN 386
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ +C+A+ DL G ++H+ +K GL ++ ++++ MY+K
Sbjct: 387 NIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKC---------------- 430
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
G++D A F + + D V W ++I ++ +G EAL +F M
Sbjct: 431 ---------------GKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEM- 474
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQ-IHAYIIRTEFDATGPVGNALISCYAKVGG 328
+ S ++P+ T L+AC++ +K GKQ + + + + T N +I Y++ G
Sbjct: 475 QGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGL 534
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGY-----IKIGDIGPARRIFDSLRDRDVVAWTAM 383
+ A +++ +V+++ +LL G ++IG I A IF L D + M
Sbjct: 535 LLEALEVIRSMPFE-PDVMSWKSLLGGCWSRRNLEIGMIA-ADNIF-RLDPLDSATYVIM 591
Query: 384 LVGYEQNGLNKDAVELFRSMVRE 406
Y G +A + FR M+ E
Sbjct: 592 FNLYALAGKWDEAAQ-FRKMMAE 613
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 350/648 (54%), Gaps = 75/648 (11%)
Query: 143 PTQFTVTSVLASCTALG-DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P+ T L S + L L AG+++H+ +K +V SLL +YA+ G
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCG------- 120
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
L A+ FD+M V+W ++I Y G EA
Sbjct: 121 ------------------------LLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREA 156
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
+ + N + ++PD FT L+ACA + L G
Sbjct: 157 VHVARNAFANG-MRPDSFTAVRVLTACARVADLATG------------------------ 191
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
E + EQ GI+ +V T +D Y+K G++ AR +FD +RD+D VAW
Sbjct: 192 --------ETVWRAAEQEGIAQ-SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWG 242
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
AM+ GY NG ++A++LF +M EG +P+ Y ++ LS + L +LD G+Q A+R
Sbjct: 243 AMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQ----AIRM 298
Query: 442 GEASSL----SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ + ALI MY+K G+ A VF + +++ + W +MI+ L G +
Sbjct: 299 VDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKT 357
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A L +M + G+K + T++G+L +CTH GL++ G+RY++ M ++ I P H+ +V
Sbjct: 358 AFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIV 417
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLL RAGLLQEA+ I++MP+ + V G+LL C++H+N +L + +L+ +EP NSG
Sbjct: 418 DLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSG 477
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L N+YS+ G+WEDAA +R MK GV+K SWV+ + KVH F V D HP D
Sbjct: 478 NYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQ 537
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ ++ E+K MG+ P T V+ DVE++ KE L HHSEKLAIAF L+ T T+R
Sbjct: 538 IYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIR 597
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ KNLRVC+DCH+AIK I ++ REI+VRD RFH F+ G CSC DYW
Sbjct: 598 VTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 188/470 (40%), Gaps = 103/470 (21%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
PNP L P+ L+S + +P G+ +HAR +K H + + SL+ YA+
Sbjct: 66 PNPSHLTFPIA-----LKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARC- 119
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
G L A VF+ MP+ +VSWT +I Y +
Sbjct: 120 ------------------------------GLLHRAQRVFDEMPHPSTVSWTALITAYMD 149
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
G + A+ + + + P FT VL +C + DL+ G+ V + G++ V V
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 209
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
+ +++Y K G+ A+ VFD MR ++D
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMR-------------------------------DKDA 238
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
V W +M+ GY+ NG+ EAL +F M + ++PD + +A LSAC L L LG+Q
Sbjct: 239 VAWGAMVGGYASNGHPREALDLFLAM-QAEGVRPDCYAVAGALSACTRLGALDLGRQAIR 297
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDI 362
+ EF +G ALI YAK G
Sbjct: 298 MVDWDEFLDNPVLGTALIDMYAKCGST--------------------------------- 324
Query: 363 GPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
A +F +R +D++ W AM++G G K A L M + G K N+ T +L
Sbjct: 325 AEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSC 384
Query: 423 SSLASLDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFN 471
+ + G++ + + S + ++ + S+AG + A ++ +
Sbjct: 385 THTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLID 434
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 40/273 (14%)
Query: 408 PKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P++ T L +S L L G+Q+HA +L+ ++ V +L+T+Y++ G ++ A
Sbjct: 66 PNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRA 125
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+RVF+ + TVSWT++I A G EA+ + G++PD T V VLTAC
Sbjct: 126 QRVFDEMP-HPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACAR 184
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ G+ + + I + + VDL + G + +A + M + D VAWG
Sbjct: 185 VADLATGETVWRAAEQ-EGIAQSVFVATAAVDLYVKCGEMAKAREVFDKM-RDKDAVAWG 242
Query: 587 SL-----------------------------------LSACRVHKNLDLGKIAAEKLLLI 611
++ LSAC LDLG+ A +
Sbjct: 243 AMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWD 302
Query: 612 E-PDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
E DN +AL ++Y+ CG +A + + M+
Sbjct: 303 EFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMR 335
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/668 (34%), Positives = 376/668 (56%), Gaps = 70/668 (10%)
Query: 79 LCSWNTILSAYAK-QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+C +++ + K + + A +VF+ M + V+WT +I ++G + AIR F++MV
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+FT++SV ++C L +LS GK++HS+ +++GL +V SL++MYAK +
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSAD- 318
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN-G 256
G +D R FD+M + V++W ++I GY +N
Sbjct: 319 ---------------------------GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
EA+ +F+ M+ ++P+ FT +S AC NL ++GKQ+ + + V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N++IS + K +E AQ R F+SL +++
Sbjct: 412 NSVISMFVKSDRMEDAQ---------------------------------RAFESLSEKN 438
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+V++ L G +N + A +L + + +T +++LS +++ S+ G+QIH+
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
++ G + + V NALI+MYSK G+I+ A RVFN + R +SWTSMI A+HG
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN-VISWTSMITGFAKHGFAI 557
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
++ F +M+E G+KP+ +TYV +L+AC+H GLV +G R++N M HKIKP H+A M
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAGLL +A+ FI MP + DV+ W + L ACRVH N +LGK+AA K+L ++P+
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
AY L N+Y+ GKWE++ +R+ MK + K G SW+++ +K+H F V D HP
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDV----EEDVKEQMLRHHSEKLAIAFGLISTPE 732
IY+++ ++ EIK G+VPDT VLH + +E KE++L HSEK+A+AFGLIST +
Sbjct: 738 QIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK 797
Query: 733 NTTLRIMK 740
+ L++++
Sbjct: 798 SRPLKMIQ 805
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 162/598 (27%), Positives = 279/598 (46%), Gaps = 113/598 (18%)
Query: 10 ISPLE--FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
I P++ ++ LL+S +++R+ +GKLVHAR+I+
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE-------------------------- 90
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLM---PNRDSVSWTTIIVTYNEIG 124
FD P L +N+++S Y+K G A +VF M RD VSW+ ++ Y G
Sbjct: 91 ---FDIEPDSVL--YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVT 183
R +AI++FVE ++ ++P + T+V+ +C+ + G+ F++KTG V V
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 184 NSLLNMYAKVGDEMMAKA--VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
SL++M+ K G+ A VFD M E +
Sbjct: 206 CSLIDMFVK-GENSFENAYKVFDKMS-------------------------------ELN 233
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
VVTW MI Q G+ EA+ F +M+ S + DKFTL+S SACA LE L LGKQ+H
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
++ IR+ V +L+ YAK DG
Sbjct: 293 SWAIRSGL--VDDVECSLVDMYAKCSA-------------------------DG-----S 320
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQN-GLNKDAVELFRSMVREG-PKPNNYTLSAML 419
+ R++FD + D V++WTA++ GY +N L +A+ LF M+ +G +PN++T S+
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
+L+ GKQ+ A + G AS+ SV+N++I+M+ K+ + A+R F + +
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNL 439
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VS+ + + ++ E+A +L + E + T+ +L+ + G + +G++ ++
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 540 MKNVHKI--KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ + +P + SM G +NF+EN +V++W S+++ H
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKH 553
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 198/417 (47%), Gaps = 73/417 (17%)
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ-FTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I+ + G + A+ M +D + P T +S+L SC D GK VH+ +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+ + NSL+++Y+K GD A+ VF+ MR
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR--------------------------- 124
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
+ +RDVV+W++M+A Y NG + +A+ +F L + L P+ + + + AC+N + +
Sbjct: 125 -RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDFV 182
Query: 295 KLGKQIHAYIIRT-EFDATGPVGNALISCYAK-VGGVEIAQKIVEQSGISYLNVIAFTTL 352
+G+ ++++T F++ VG +LI + K E A K+ ++ +S LN
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK--MSELN------- 233
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
VV WT M+ Q G ++A+ F MV G + +
Sbjct: 234 ------------------------VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRV 469
+TLS++ S + L +L GKQ+H+ A+RSG + S L+ MY+K G+++ R+V
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKV 327
Query: 470 FNLIHWRQETVSWTSMIVALAQH-GLGEEAIQLFERMLELG-IKPDHITYVGVLTAC 524
F+ + +SWT++I ++ L EAI LF M+ G ++P+H T+ AC
Sbjct: 328 FDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 152/372 (40%), Gaps = 40/372 (10%)
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D D T +S L +C +LGK +HA +I + + + N+LIS Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR---DRDVVAWTAML 384
D A +F+++R RDVV+W+AM+
Sbjct: 112 ---------------------------------DSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE- 443
Y NG DA+++F + G PN+Y +A++ S+ + G+ +++G
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 444 ASSLSVSNALITMYSKAGN-INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + V +LI M+ K N A +VF+ + V+WT MI Q G EAI+ F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M+ G + D T V +AC + G++ ++ + M
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSA 317
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
G + + + M + V++W +L++ + NL I ++ + +
Sbjct: 318 DGSVDDCRKVFDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 623 CNLYSSCGKWED 634
+ + +CG D
Sbjct: 377 SSAFKACGNLSD 388
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 35/253 (13%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P VGK V + K GL + + NS+++ + K++ + A++ F+ + K L S+NT
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF-- 445
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
LD C N F+ A ++ E+ + ++ + FT
Sbjct: 446 -------LDGTCRNLN----------------------FEQAFKLLSEITERELGVSAFT 476
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
S+L+ +G + G+++HS VVK GLS V N+L++MY+K G A VF+ M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALG 263
+NV SW +++ G F+QMIE V VT+ ++++ S G E
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 264 MFANMLKDSSLKP 276
F +M +D +KP
Sbjct: 597 HFNSMYEDHKIKP 609
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Query: 394 KDAVELFRSMVREGPKP-NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA 452
+ AV M R+G +P ++ T S++L GK +HA + + N+
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 453 LITMYSKAGNINAARRVFNLIH--WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
LI++YSK+G+ A VF + +++ VSW++M+ +G +AI++F LELG+
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA-GLLQEA 569
P+ Y V+ AC++ V G+ + + S++D+ + + A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 570 YNFIENMPLEPDVVAWGSLLSAC 592
Y + M E +VV W +++ C
Sbjct: 223 YKVFDKMS-ELNVVTWTLMITRC 244
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 28/145 (19%)
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IE 612
S +DL+ R G+ P+ D V + SLL +C ++ LGK+ +L+ IE
Sbjct: 47 SALDLMARDGI----------RPM--DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE 94
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
PD S Y++L +LYS G A ++ ++M+ G K SW + G E
Sbjct: 95 PD-SVLYNSLISLYSKSGDSAKAEDVFETMRRFG--KRDVVSWSAMMACYGNNGRE---- 147
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPD 697
DAI K++ E E+G VP+
Sbjct: 148 --LDAI-----KVFVEFLELGLVPN 165
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/645 (35%), Positives = 367/645 (56%), Gaps = 37/645 (5%)
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ V+S+++ +L+ K++H V++ GL + L+ K+G
Sbjct: 47 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLG---------- 96
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
V + + R+ + QF R+ W ++I GY+ G EA+ M
Sbjct: 97 -------------VPMDPYPRRV-IEPVQF-----RNPFLWTAVIRGYTIEGKFDEAIAM 137
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
+ M K+ + P FT ++ L AC ++ L LG+Q HA R VGN +I Y
Sbjct: 138 YGCMRKEE-ITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYV 196
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G + A+K+ ++ + +VI++T L+ Y ++G++ A +F+SL +D+VAWTAM+
Sbjct: 197 KCGSIVCARKVFDE--MPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMV 254
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G+ QN ++A+E F M + G + + T++ +S + L + + + A +SG +
Sbjct: 255 TGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYS 314
Query: 445 SS--LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + + +ALI MYSK GN+ A VF ++ + S++SMI+ LA HG +EA+ LF
Sbjct: 315 PSDHVVIGSALIDMYSKCGNVEEAVNVFVSMN-NKNVFSYSSMILGLATHGRAQEALDLF 373
Query: 503 ERML-ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
M+ + IKP+ +T+VG LTAC+H GLV+QG++ + M ++PT H+ MVDLLG
Sbjct: 374 HYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLG 433
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG LQEA I+ M +EP WG+LL ACR+H N D+ +IAAE L +EPD G Y
Sbjct: 434 RAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYIL 493
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN-KVHVFGVEDWLHPQRDAIYN 680
L N+YSS G W ++RK +K G+KKT SWV +N ++H F + HP I +
Sbjct: 494 LSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSKKIQD 553
Query: 681 KMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMK 740
K+ ++ + + +G+ PD +SV +DV ++ K +L H+EKLA+AF L++T + T++IMK
Sbjct: 554 KLEELVERLTALGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDYTIKIMK 613
Query: 741 NLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
NLR+C DCH ++ ++ R I++RD RFHHF+ G CSC D+W
Sbjct: 614 NLRMCQDCHMFMRLASEVTGRVIIMRDNMRFHHFRSGACSCGDFW 658
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 204/411 (49%), Gaps = 38/411 (9%)
Query: 108 RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
R+ WT +I Y G+F AI M+ M ++++ P FT +++L +C ++GDL+ G++
Sbjct: 113 RNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQF 172
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H+ + V V N++++MY K G + A+ VFD M ++V SW +++ + G +
Sbjct: 173 HAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNM 232
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+ A F+ + +D+V W +M+ G++QN EAL F M K S ++ D+ T+A +SA
Sbjct: 233 ESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK-SGIRADEVTVAGYISA 291
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN-V 346
CA L K + V+IAQK SG S + V
Sbjct: 292 CAQLGASKYADR----------------------------AVQIAQK----SGYSPSDHV 319
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+ + L+D Y K G++ A +F S+ +++V ++++M++G +G ++A++LF MV +
Sbjct: 320 VIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQ 379
Query: 407 GP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNIN 464
KPN T L+ S +D G+Q+ AS ++ G + ++ + +AG +
Sbjct: 380 TAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQ 439
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
A + + W +++ A H + A E + EL +PD I
Sbjct: 440 EALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFEL--EPDII 488
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 151/301 (50%), Gaps = 34/301 (11%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
I+P+ F ++ LL++ + +G+ HA+ + V++ N++++ Y K SI A+
Sbjct: 146 ITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCAR 205
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
KVFDEMP + + SW +++AYA+ G ++ A ++F +P +D V+WT ++ + + + +
Sbjct: 206 KVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQE 265
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC--VNVTNSL 186
A+ F M + + + TV +++C LG + K+G S V + ++L
Sbjct: 266 ALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSAL 325
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MY+K G+ A VF M KNV S ++
Sbjct: 326 IDMYSKCGNVEEAVNVFVSMNNKNVFS-------------------------------YS 354
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
SMI G + +G EAL +F M+ +++KP+ T L+AC++ + G+Q+ A + +
Sbjct: 355 SMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQ 414
Query: 307 T 307
T
Sbjct: 415 T 415
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/559 (38%), Positives = 344/559 (61%), Gaps = 5/559 (0%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+D A F +V + ++I G+ +G EA+ +++ ML +S L PD + +AS L
Sbjct: 97 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESIL-PDNYLMASILK 155
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
AC + L+ G+++H+ ++ F + V ++ Y K G + A+++ E+ +V
Sbjct: 156 ACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMP---EDV 212
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+A T ++ Y G + A +F +R +D V WTAM+ G+ +N A+E FR M E
Sbjct: 213 VASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGE 272
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
+PN +T+ +LS S L +L+ G+ +H+ + +L V NALI MYS+ G+I+ A
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 332
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+ VF+ + R + +++ +MI L+ +G +AI+LF M+ ++P ++T+VGVL AC+H
Sbjct: 333 QTVFDEMKDR-DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSH 391
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
GGLV+ G ++ M ++++P H+ MVDLLGR G L+EAY+ I M + PD + G
Sbjct: 392 GGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLG 451
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LLSAC++HKNL+LG+ A++L +SG Y L ++Y+S GKW++AA +R MK G
Sbjct: 452 TLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAG 511
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
++K G S +++ N++H F + D HPQ++ IY K+ ++ ++ G+ P+ VL D+E
Sbjct: 512 MQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIE 571
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
+ KE L HSE+LAI +GLIST T +R+MKNLRVC DCHSAIK I K+ R+IVVR
Sbjct: 572 DGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVR 631
Query: 767 DATRFHHFKKGLCSCRDYW 785
D RFH+F+ G CSC DYW
Sbjct: 632 DRNRFHYFENGACSCGDYW 650
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 208/451 (46%), Gaps = 69/451 (15%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+L + +K +D A +F N + +T +I + G + AI+++ M+ + +LP
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 146
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ + S+L +C + L G++VHS +K G S V ++ +Y K G+ A+ VF+
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M ++V + V++S + G ++ A A F ++ +D V W +MI G+ +N AL
Sbjct: 207 EMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEA 265
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +++P++FT+ LSAC+ L L++G+ +H+Y+ + E + VGNALI+ Y+
Sbjct: 266 FRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 324
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ G ++ AQ +FD ++DRDV+ + M+
Sbjct: 325 RCGSIDEAQT---------------------------------VFDEMKDRDVITYNTMI 351
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
G NG ++ A+ELFR MV +P N T +L+ S +D G +I S R
Sbjct: 352 SGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARD--- 408
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
Y I + M+ L + G EEA L
Sbjct: 409 ------------YRVEPQIE----------------HYGCMVDLLGRVGRLEEAYDLIRT 440
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
M + PDHI +L+AC +E G++
Sbjct: 441 M---KMTPDHIMLGTLLSACKMHKNLELGEQ 468
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 179/384 (46%), Gaps = 46/384 (11%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH+R +K G + ++ +M Y K + A++VF+EMP + S ++S+Y+
Sbjct: 166 GREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAS-TVMISSYSD 224
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
QG ++ A VF+ + +D+V WT +I + A+ F M + V P +FT+ V
Sbjct: 225 QGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCV 284
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C+ LG L G+ VHS++ K + + V N+L+NMY++ G A+ VFD M+
Sbjct: 285 LSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK---- 340
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+RDV+T+N+MI+G S NG +A+ +F M+
Sbjct: 341 ---------------------------DRDVITYNTMISGLSMNGKSRQAIELFRVMV-G 372
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQI-----HAYIIRTEFDATGPVGNALISCYAKV 326
L+P T L+AC++ + G +I Y + + + G ++ +V
Sbjct: 373 RRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYG----CMVDLLGRV 428
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR---DVVAWTAM 383
G +E A ++ ++ + I TLL ++ ++ L DR D + +
Sbjct: 429 GRLEEAYDLIRTMKMT-PDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLL 487
Query: 384 LVGYEQNGLNKDAVELFRSMVREG 407
Y +G K+A ++ M G
Sbjct: 488 SHVYASSGKWKEAAQVRAKMKEAG 511
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH+ + K + L++F+ N+L+N Y++ SI A+ VFDEM + + ++NT++S +
Sbjct: 296 IGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLS 355
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
G+ A E+F +M R +V++ ++ + G +F M +D + Q
Sbjct: 356 MNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQ 414
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGK---------------QIHASALRSGEASSLSVSN 451
GP P + S S SL SLD + IHA +R+G + +
Sbjct: 28 GPSPKPHPNSN--SNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVF 85
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
L+ SK I+ A R+F H +T++I G EAIQL+ RML I
Sbjct: 86 ELLRSCSKCHAIDYASRIFQYTH-NPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESIL 144
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM--VDLLGRAGLLQEA 569
PD+ +L AC + +G+ ++ K+ + + + ++L G+ G L +A
Sbjct: 145 PDNYLMASILKACGSQLALREGREVHS---RALKLGFSSNRLVRLRIMELYGKCGELGDA 201
Query: 570 YNFIENMPLEPDVVAWGSLLSA 591
E MP DVVA ++S+
Sbjct: 202 RRVFEEMP--EDVVASTVMISS 221
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 252/845 (29%), Positives = 409/845 (48%), Gaps = 126/845 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY- 89
+GK+VH +I+ + VF+ N+L++FY+ + ++ VF M + + SW ++SAY
Sbjct: 201 IGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYM 260
Query: 90 ----------------------------------AKQGRLDLACEVFNLMPNRDSV---- 111
A+ G +DLA E MP R
Sbjct: 261 EEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVN 320
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SW II + G ++A+ MF M+ P T+ S+L +CT L L GK +H
Sbjct: 321 SWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIA 380
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
K G+ G V V S+++MY+K G A+ VF KN + WN +++ +++ G+++ A
Sbjct: 381 XKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDAL 440
Query: 232 AQFDQM---------------------------------------IERDVVTWNSMIAGY 252
M ++ +VV++N +I+G+
Sbjct: 441 GLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGF 500
Query: 253 SQNGYDFEALGMFANMLKDS-----------SLKPDKFTLASTLSACANLEKLKLGKQIH 301
Q+G +EAL +F M S S++P+ T+ L ACA+L GK+IH
Sbjct: 501 QQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIH 560
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y +R F+ N+ + L+D Y K D
Sbjct: 561 GYTLRNGFEP---------------------------------NIFVSSALVDMYAKCHD 587
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A ++F + R+ V+W A++ GY N ++A++LF M+ EG +P++ T +
Sbjct: 588 MDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPA 647
Query: 422 SSSLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+A++ G+ +H A + + ++ +ALI MY+K G+I A+ VF+ ++
Sbjct: 648 CGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFD-SEVEKDVP 706
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
W +MI A + HG+ A +F +M LGI PDHIT+V +L+AC GLVE+G +Y+N M
Sbjct: 707 LWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSM 766
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ + + T H+ MV +LG AGLL EA +FI MP PD W +LL ACRVH N ++
Sbjct: 767 EISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEI 826
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G+ AA+ L +EPDN+ Y L N+Y S G W+ A N+R M+ + + S++ + +
Sbjct: 827 GERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGS 886
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
F + HP+ + I + +++ G+ P + D EE + H+EK
Sbjct: 887 HXCTFKGGESSHPELEEILETWDXLARKMELSGYFP--LDPVFDDEEKELDPFSCLHTEK 944
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAI FG+IS+ + + KN+R+C DCH++ K I K+ REI V+D +HH K G+C
Sbjct: 945 LAICFGIISSNXYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICX 1004
Query: 781 CRDYW 785
C+D W
Sbjct: 1005 CQDRW 1009
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 174/694 (25%), Positives = 319/694 (45%), Gaps = 136/694 (19%)
Query: 33 KLVHARIIKC-GLHLSVFLKNSLMNFYAKTE-SISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ +HAR++K L + N L+ Y K + S+ A+K+ DE+P +T+ ++ ++ +Y
Sbjct: 100 RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYC 159
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ + D E+F+ F MV + +LP ++ V +
Sbjct: 160 RSEQWD---ELFS----------------------------XFRLMVYEGMLPDKYLVPT 188
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C+A+ GK VH FV++ + V V N+L++ Y+ GD +++VF M+ ++
Sbjct: 189 ILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERD 248
Query: 211 VSSWNVVVSLHIH-----------------------------------SGRLDLARAQFD 235
V SW ++S ++ +G +DLA +
Sbjct: 249 VVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLE 308
Query: 236 QMIER----DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
+M ER V +WN +I+G QNGY +AL MF+ ML P+ T+AS L AC L
Sbjct: 309 EMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPE-DPNIITIASILPACTGL 367
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG----------- 340
+ L+LGK IH + V ++I Y+K G + A+K+ ++
Sbjct: 368 KALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMI 427
Query: 341 ISYLN----------------------VIAFTTLLDGYIKIGDIGPARRIFDSLRDR--- 375
+Y+N VI + T+L G+ + G A + +
Sbjct: 428 AAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLK 487
Query: 376 -DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP--------------KPNNYTLSAMLS 420
+VV++ ++ G++Q+GL+ +A+++FR M + P +PN T++ L
Sbjct: 488 PNVVSFNVLISGFQQSGLSYEALKVFRIM--QSPSDGCNPNEVLNLSMRPNPITITGALP 545
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L GK+IH LR+G ++ VS+AL+ MY+K ++++A +VF I R TV
Sbjct: 546 ACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRN-TV 604
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SW +++ + EEA++LF ML G++P IT++ + AC + G+ +
Sbjct: 605 SWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYA 664
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH---KN 597
+ + ++++D+ + G + +A + ++ +E DV W +++SA VH +N
Sbjct: 665 AKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISAFSVHGMARN 723
Query: 598 LDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+LL I PD + +L S+C +
Sbjct: 724 A-FAVFXQMELLGIXPD----HITFVSLLSACAR 752
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 138/557 (24%), Positives = 242/557 (43%), Gaps = 103/557 (18%)
Query: 143 PTQFTVT-SVLASCTALGDLSAGKKVHSFVVK-TGLSGCVNVTNSLLNMYAKVGDEMMAK 200
PT+ + + S+L C+ L + +++H+ VVK L ++ N L+ +Y K
Sbjct: 80 PTEISDSISLLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCK-------- 128
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
+ W+ L+ AR D++ R V + ++I Y ++ E
Sbjct: 129 -----------NQWS-----------LEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDE 166
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
F M+ + L PDK+ + + L AC+ + ++GK +H ++IR ++ VGNALI
Sbjct: 167 LFSXFRLMVYEGML-PDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALI 225
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRD 376
Y+ G + ++ + + +V+++T L+ Y++ G A+ IF ++ D
Sbjct: 226 HFYSNCGDLGSSRSVFHS--MQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPD 283
Query: 377 VVAWTAMLVGYE-----------------------------------QNGLNKDAVELFR 401
+++W+A+L G+ QNG +DA+++F
Sbjct: 284 LISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFS 343
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M+ PN T++++L + L +L GK IH A + G ++ V ++I MYSK G
Sbjct: 344 RMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCG 403
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
+ + A +VF + T W MI A G E+A+ L M + G KPD ITY +L
Sbjct: 404 SYDYAEKVFXKAE-NKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTIL 462
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY----------- 570
+ GL Q + M + +KP F ++ ++GL EA
Sbjct: 463 SGHARNGLKTQAXELLSEMVQM-GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSD 521
Query: 571 ----NFIENMPLEPDVVAWGSLLSACRVHKNLDL---GKIAAEKLLL--IEPDNSGAYSA 621
N + N+ + P+ + L AC +L+L GK L EP N SA
Sbjct: 522 GCNPNEVLNLSMRPNPITITGALPAC---ADLNLWCQGKEIHGYTLRNGFEP-NIFVSSA 577
Query: 622 LCNLYSSCGKWEDAANI 638
L ++Y+ C + A +
Sbjct: 578 LVDMYAKCHDMDSANKV 594
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 43/270 (15%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP ++ L A L NL + GK +H ++ G ++F+ ++L++ YAK
Sbjct: 535 PNPITITGALPACADL---NLWCQ----GKEIHGYTLRNGFEPNIFVSSALVDMYAKCHD 587
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A KVF + + SWN +++ Y + N P
Sbjct: 588 MDSANKVFFRIDGRNTVSWNALMAGY-----------INNKQP----------------- 619
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-V 182
+ A+++F+EM+ + + P+ T + +C + + G+ +H + K L N +
Sbjct: 620 ---EEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAI 676
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----I 238
++L++MYAK G + AK+VFD K+V WN ++S G A A F QM I
Sbjct: 677 XSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGI 736
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
D +T+ S+++ +++G E F +M
Sbjct: 737 XPDHITFVSLLSACARDGLVEEGWKYFNSM 766
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/620 (36%), Positives = 346/620 (55%), Gaps = 64/620 (10%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
L A + FD + E +V+WN +I Y +N +A+ +F +L D PD FTL L
Sbjct: 65 LQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCD--FVPDSFTLPCVLK 122
Query: 287 ACANLEKLKLGKQIHAYIIRTEF-------------------------------DATGPV 315
CA L L+ GKQIH +++ F D
Sbjct: 123 GCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVS 182
Query: 316 GNALISCYAKVGGVEIAQKIVEQ-------------SGIS----------------YLNV 346
N+LI YA+ G +E+A ++ E+ G+S N
Sbjct: 183 WNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNS 242
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+++ +++GY+K GD A+ +FD + +R +V W +M+ GYE+N A++LF M+RE
Sbjct: 243 VSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRE 302
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
PN T+ +S +S + SL G+ +H+ ++SG + + LI MYSK G++ +A
Sbjct: 303 DISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSA 362
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
RVF I +++ WTS+IV L HGL E+ ++LF+ M G+KP IT++GVL AC+H
Sbjct: 363 LRVFRSIP-KKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 421
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
G E RY+ MM + IKP+ H+ ++D+L RAG L+EA + IE MP++ + V W
Sbjct: 422 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 481
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
SLLS R H N+ +G+ AA+ L+ + PD +G Y L N+Y++ G WE +R+ MK G
Sbjct: 482 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG 541
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+KK G S ++ Q +H F V D HPQ + IY K+ ++ ++ G +PDT VL +E
Sbjct: 542 MKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLE 601
Query: 707 ED-VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVV 765
ED KE L HSE+LAIAFGL++ + +RI+KNLR+CNDCH+ K + + +REI++
Sbjct: 602 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 661
Query: 766 RDATRFHHFKKGLCSCRDYW 785
RD +RFHHFK G CSC+D+W
Sbjct: 662 RDGSRFHHFKSGSCSCKDFW 681
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 222/540 (41%), Gaps = 112/540 (20%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTI 85
S PF+ +H + CG N L KT S+++ ++ S
Sbjct: 9 SLQPFLPPNLHFPLQNCGTEREA---NQLHALSIKTASLNHP----------SVSSRLLA 55
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
L A + L A +F+ + VSW +I Y E R +AI +F +++ D V P
Sbjct: 56 LYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDS 114
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
FT+ VL C LG L GK++H V+K G V +SL++MY+K G+ + + VFD
Sbjct: 115 FTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDR 174
Query: 206 MRLKNVSSWNVVVSLHIH-------------------------------SGRLDLARAQF 234
M K+V SWN ++ + SG+L+ AR F
Sbjct: 175 MEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVF 234
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS---------------------- 272
D+M R+ V+WN+MI GY + G A +F M + S
Sbjct: 235 DRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALK 294
Query: 273 --------SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
+ P+ T+ +SA + + L G+ +H+YI+++ F G +G LI Y+
Sbjct: 295 LFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYS 354
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G V+ A R+F S+ + + WT+++
Sbjct: 355 KCGSVK---------------------------------SALRVFRSIPKKKLGHWTSVI 381
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLA-SLDHGKQIHASALRSGE 443
VG +GL + +ELF M R G KP+ T +L+ S + D + G
Sbjct: 382 VGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGI 441
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
S+ LI + +AG++ A+ + + V WTS++ +HG +GE A Q
Sbjct: 442 KPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQ 501
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 342/564 (60%), Gaps = 10/564 (1%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
SGRLD + + + + + S I +S G L + ++ML + L P TL++
Sbjct: 69 SGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEG-LLPTAHTLSA 127
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+L AC L LG+ +HAY + V AL+S YA+ G A+ + ++ +
Sbjct: 128 SLPAC---RGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDE--MPD 182
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
+V++ T +L Y +G + ARR+FD L +D + W AM+ GY Q+G +A++LFR M
Sbjct: 183 PHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRM 242
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV--SNALITMYSKAG 461
+R +P+ T+ +LS + L +++ GK +H S +++ L+V + AL+ MY K G
Sbjct: 243 LRSSAEPDEVTVVLVLSAVAQLGTVESGKWLH-SYVKNSRCVQLNVRVATALVDMYCKCG 301
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
++ A VF+ I ++ V W +MI A HG +A+++F ++ + G+ P IT++G+L
Sbjct: 302 SLEDAVAVFHGI-GNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLL 360
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
AC+H GLVE+G+ ++ M++ + I P H+ MVDLLGRAGL++EA++ ++++ + PD
Sbjct: 361 NACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPD 420
Query: 582 VVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKS 641
V W SLL+ACR+HKN+ LG+ A+ L+ NSG Y L N+Y++ GKWE+ A +R
Sbjct: 421 AVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSM 480
Query: 642 MKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
MK G++K G S ++I KV+ F D HP D IY + K+ +KE G VP T V
Sbjct: 481 MKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELV 540
Query: 702 LHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDR 761
LHD++E KE+ L HSEKLA+AFGLIS+ +T++I+KNLR C+DCH+ +K I K+ R
Sbjct: 541 LHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSR 600
Query: 762 EIVVRDATRFHHFKKGLCSCRDYW 785
+IV RD RFHHF G C+C DYW
Sbjct: 601 KIVFRDRNRFHHFVDGSCTCGDYW 624
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 198/406 (48%), Gaps = 37/406 (9%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AYA GRLD + + + ++ +T+ I ++ G + + +M+ + +LPT T
Sbjct: 65 AYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHT 124
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+++ L +C L S G+ +H++ K LSG V +LL+MYA+ GD A+A+FD M
Sbjct: 125 LSASLPACRGL---SLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMP 181
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+V S +++ + + G LD AR FD + +D + WN+MI GY+Q+G EAL +F
Sbjct: 182 DPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRR 241
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
ML+ SS +PD+ T+ LSA A L ++ GK +H+Y
Sbjct: 242 MLR-SSAEPDEVTVVLVLSAVAQLGTVESGKWLHSY------------------------ 276
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
V+ S LNV T L+D Y K G + A +F + ++D+V W AM+ GY
Sbjct: 277 --------VKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGY 328
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
+G ++ A+E+F + +G P + T +L+ S ++ G+ S G
Sbjct: 329 AMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPK 388
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG I A + + + V W S++ A H
Sbjct: 389 IEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLH 434
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 171/366 (46%), Gaps = 50/366 (13%)
Query: 17 AHLLQSNLKS-RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
AH L ++L + R +G+ +HA K L ++ +L++ YA+ + A+ +FDEMP
Sbjct: 122 AHTLSASLPACRGLSLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMP 181
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ S +L+ YA G LD A +F+ +P +D + W +I Y + G+ A+++F
Sbjct: 182 DPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRR 241
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN----VTNSLLNMYA 191
M++ P + TV VL++ LG + +GK +HS+V S CV V +L++MY
Sbjct: 242 MLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKN---SRCVQLNVRVATALVDMYC 298
Query: 192 KVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
K G A AVF G+ K D+V WN+MI G
Sbjct: 299 KCGSLEDAVAVFHGIGNK-------------------------------DIVVWNAMING 327
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI-----HAYIIR 306
Y+ +G +AL MF L+D L P T L+AC++ ++ G+ H Y I
Sbjct: 328 YAMHGDSRKALEMFVQ-LRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGID 386
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ + G ++ + G +E A +V+ I+ + + + +LL ++ +
Sbjct: 387 PKIEHYG----CMVDLLGRAGLIEEAFHLVQSLTITP-DAVMWVSLLAACRLHKNMALGQ 441
Query: 367 RIFDSL 372
RI D L
Sbjct: 442 RIADFL 447
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 38/310 (12%)
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
L +C E+ +V + G+ +AF L Y G + + + +D +
Sbjct: 31 LAACSTARRASELHAAVVRK-GLDSDRAVAFR-LQRAYAASGRLDHSLTLLGRTKDPTTI 88
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA 438
+T+ + + GL+ + L M+ EG P +TLSA L L+ G+ +HA A
Sbjct: 89 FYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLSL---GRALHAYA 145
Query: 439 LRSGEASSLSVSNALITM-------------------------------YSKAGNINAAR 467
+ + V+ AL++M Y+ G ++ AR
Sbjct: 146 FKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDAR 205
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
R+F+ + R++ + W +MI QHG EA+QLF RML +PD +T V VL+A
Sbjct: 206 RLFDGLP-RKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQL 264
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G VE G+ ++ +KN ++ ++VD+ + G L++A + D+V W +
Sbjct: 265 GTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIG-NKDIVVWNA 323
Query: 588 LLSACRVHKN 597
+++ +H +
Sbjct: 324 MINGYAMHGD 333
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/667 (35%), Positives = 374/667 (56%), Gaps = 69/667 (10%)
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y+ + + M+ +M V P F ++ S + G H+ V+K G
Sbjct: 5 YSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGSD 59
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V N++++MYA+ V+ WN +VS + A+ FD M E
Sbjct: 60 AFVRNAVIDMYAR-----------------KVADWNAMVSGYWKWESEGQAQWLFDVMPE 102
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
R+V+TW +M+ GY++ D EA + + + + S+
Sbjct: 103 RNVITWTAMVTGYAKVK-DLEAARRYFDCMPERSVVS----------------------- 138
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
NA++S YA+ G E A ++ ++ +Y N + + ++ Y+++
Sbjct: 139 ----------------WNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRV 182
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAM 418
GD+ AR++F+++ R+VV W +M+ GY QNG + A+ELF+ M+ P+ T+ ++
Sbjct: 183 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 242
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
+S L +L+ G + + S+S NA+I MYS+ G++ A+RVF + R +
Sbjct: 243 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR-D 301
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VS+ ++I A HG G EAI L M E GI+PD +T++GVLTAC+H GL+E+G++ +
Sbjct: 302 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 361
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
+K+ P H+A MVDLLGR G L++A +E MP+EP +GSLL+A R+HK +
Sbjct: 362 SIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 416
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
+LG++AA KL +EPDNSG + L N+Y+S G+W+D IR++MK GVKKT G+SWV+
Sbjct: 417 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 476
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
K+H F V D H + D IY + ++ +++E G++ D + VL DVEE+ KE+++ HS
Sbjct: 477 GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHS 536
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLAI + L+ + +R++KNLRVC DCH+AIK I KL R I+VRD RFH F GL
Sbjct: 537 EKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGL 596
Query: 779 CSCRDYW 785
CSC+DYW
Sbjct: 597 CSCKDYW 603
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 214/485 (44%), Gaps = 105/485 (21%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRL 95
HA ++K G F++N++++ YA+ KV D WN ++S Y K
Sbjct: 48 HAHVLKLGHGSDAFVRNAVIDMYAR--------KVAD---------WNAMVSGYWKWESE 90
Query: 96 DLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASC 155
A +F++MP R+ ++WT ++ Y ++ + A R F +P + V+
Sbjct: 91 GQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYF------DCMPERSVVS------ 138
Query: 156 TALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM--RLKNVSS 213
N++L+ YA+ G A +FD M +N +
Sbjct: 139 ---------------------------WNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVT 171
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
WN ++S ++ G LD AR F+ M R+VVTWNSMIAGY+QNG A+ +F M+
Sbjct: 172 WNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 231
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
L PD+ T+ S +SAC +L L+LG + ++ + + NA+I Y++ G +E A+
Sbjct: 232 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 291
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
++ ++ + RDVV++ ++ G+ +G
Sbjct: 292 RVFQE---------------------------------MATRDVVSYNTLISGFAAHGHG 318
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+A+ L +M G +P+ T +L+ S L+ G+++ S + ++ +
Sbjct: 319 VEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV----FESIKDPAIDHYACM 374
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGE-EAIQLFERMLELG 509
+ + + G + A+R + + S++ A H LGE A +LFE
Sbjct: 375 VDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFE------ 428
Query: 510 IKPDH 514
++PD+
Sbjct: 429 LEPDN 433
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 42/207 (20%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
TP+ +++S + HL L G V + + + LS+ N+++ Y++
Sbjct: 233 TPDEVTMVSVISACGHLGALEL-------GNWVVRFLTENQIKLSISGHNAMIFMYSRCG 285
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
S+ AK+VF EM + + S+NT++S +A G E NLM
Sbjct: 286 SMEDAKRVFQEMATRDVVSYNTLISGFAAHGH---GVEAINLMST--------------- 327
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNV 182
M + + P + T VL +C+ G L G+KV + ++
Sbjct: 328 -------------MKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPA----IDH 370
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++++ +VG+ AK + M ++
Sbjct: 371 YACMVDLLGRVGELEDAKRTMERMPME 397
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 246/708 (34%), Positives = 379/708 (53%), Gaps = 70/708 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
+++S Y + G LD A + M RD V+W ++ + G AI + M +
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ T SVL +C L LS G+++H A+ +
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIH------------------------------ARVL 388
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
G+ + V+ N V++++ G+ + A + F+ M +D V+WN++I N +AL
Sbjct: 389 LCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDAL 448
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDA-TGPVGNALIS 321
+F M + L+ ++FTL S L AC LE LKL +QIHA F + VGN++++
Sbjct: 449 ELFHGM-ELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVN 507
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
YA+ G +LLD A++ FDSL ++ +VAW+
Sbjct: 508 MYARCG-----------------------SLLD----------AKKAFDSLEEKGLVAWS 534
Query: 382 AMLVGYEQ--NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
+L Y Q +G + A + F+ M EG KP T + L +++A+L+HG+ +H A
Sbjct: 535 IILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAA 594
Query: 440 RSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
SG +SL + N +I MY K G+ + A+ VF+ + + +SW S+IVA A +G EA
Sbjct: 595 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP-EKCLISWNSLIVAYAHNGHALEA 653
Query: 499 IQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+ + ML G PD T V +L +H GL+E+G ++ H ++P+ +VD
Sbjct: 654 LSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVD 713
Query: 559 LLGRAGLLQEAYNFIENMP-LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
LL R G L A I P + D +AW +LL+AC+ + + G AE++ +EP +SG
Sbjct: 714 LLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSG 773
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
++ L NLY+S G+W DA+ IRK M+ + VKK G SW+++ VH F + HP+
Sbjct: 774 SFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIRE 833
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
I + K+ ++E G+VPDT +V+HDVEE KE++L HSE+LAI FGL+ST T+R
Sbjct: 834 ICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIR 893
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++KNLRVC+DCH+A K I +V REIVVRD++RFHHFK G CSC D+W
Sbjct: 894 VVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 242/535 (45%), Gaps = 98/535 (18%)
Query: 57 FYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTI 116
Y K ++ A VFD + K + SW +++AY++
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQN------------------------ 36
Query: 117 IVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGL 176
G ++ A+ +F M + P + L +C A G+L G+++HS VV +GL
Sbjct: 37 -------GHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGL 89
Query: 177 SGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQ 236
+ + ++NSL+NMY K D A+ VFDGM L++V S
Sbjct: 90 TSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVS----------------------- 126
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
W +M+A Y+QNG +AL + M + +KP++ T + + CA L L L
Sbjct: 127 --------WTAMLAVYAQNGCWSQALECLSRMDAE-GVKPNQVTFVTIVDVCAKLRLLDL 177
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
G++IH II + G +GNAL+ Y G +
Sbjct: 178 GRKIHHRIINEGLEPDGILGNALVHMYGSCGSFD-------------------------- 211
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+ +F + V+ WT M+ G QNG ++ + +FR M EG K N T
Sbjct: 212 -------DMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYM 264
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+M+ V +L ++ G+ I A L S SS ++ +LI++Y + G ++ A+ + ++ R
Sbjct: 265 SMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQR 324
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ V+W +M+ A AQ+G EAI L RM G + +TY+ VL AC + + QG+
Sbjct: 325 -DVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREI 383
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + ++ + S++ + G+ G + A + E MP + D V+W ++++A
Sbjct: 384 HARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDD-VSWNAVINA 437
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/563 (26%), Positives = 257/563 (45%), Gaps = 103/563 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H+ ++ GL ++ + NSL+N Y K + + A+KVFD M ++ + SW +L+ YA+
Sbjct: 77 GRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQ 136
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G W+ A+ M + V P Q T ++
Sbjct: 137 NG------------------CWS-------------QALECLSRMDAEGVKPNQVTFVTI 165
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ C L L G+K+H ++ GL + N+L++MY G FD M
Sbjct: 166 VDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGS-------FDDM----- 213
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
++ F +M + V+ W +MIAG SQNG E L +F M +
Sbjct: 214 -------------------KSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLE 254
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+K ++ T S + C NL+ +K G+ I A I+ + F ++ + +LIS Y + G ++
Sbjct: 255 -GVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDR 313
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+ ++E + RDVVAW AM+ QNG
Sbjct: 314 AKGLLEH---------------------------------MYQRDVVAWNAMVTACAQNG 340
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG-EASSLSVS 450
N +A+ L R M EG N T ++L ++L +L G++IHA L G ++V
Sbjct: 341 DNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVG 400
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
N++ITMY K G AA VF + R++ VSW ++I A + ++A++LF M G+
Sbjct: 401 NSVITMYGKCGQTEAAMSVFEAMP-RKDDVSWNAVINASVGNSKFQDALELFHGMELEGL 459
Query: 511 KPDHITYVGVLTACTHGGL--VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
+ + T + +L AC GGL ++ ++ + + + S+V++ R G L +
Sbjct: 460 RSNEFTLLSLLEAC--GGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLD 517
Query: 569 AYNFIENMPLEPDVVAWGSLLSA 591
A +++ E +VAW +L+A
Sbjct: 518 AKKAFDSLE-EKGLVAWSIILAA 539
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 182/362 (50%), Gaps = 43/362 (11%)
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FD + ++V +W M+A YSQNG+ EAL +F M + + +PDK L ACA +
Sbjct: 15 FDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGT-RPDKVVFVIALDACAASGE 73
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L G+QIH+ + VG+ L S N+I +L+
Sbjct: 74 LDHGRQIHSSV----------VGSGLTS-----------------------NIIISNSLV 100
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
+ Y K D+ A ++FD + RDVV+WTAML Y QNG A+E M EG KPN
Sbjct: 101 NMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQV 160
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
T ++ V + L LD G++IH + G + NAL+ MY G+ + + VF+ +
Sbjct: 161 TFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRM 220
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
+ + WT+MI +Q+G EE + +F +M G+K + +TY+ ++ C + V++G
Sbjct: 221 G-QSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG 279
Query: 534 QRYYNMMKNVHKIKPTPSHF---ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS 590
+ M+ P S S++ L G+ G+L A +E+M + DVVAW ++++
Sbjct: 280 E----MIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVT 334
Query: 591 AC 592
AC
Sbjct: 335 AC 336
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 138/255 (54%), Gaps = 3/255 (1%)
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
Y K + A +FD + ++V +WT M+ Y QNG ++A+ELF M EG +P+
Sbjct: 2 YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHW 475
L ++ LDHG+QIH+S + SG S++ +SN+L+ MY K ++ A +VF+ +
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR 535
R + VSWT+M+ AQ+G +A++ RM G+KP+ +T+V ++ C L++ G++
Sbjct: 122 R-DVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 536 YYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
++ + N ++P ++V + G G + + M + V+ W ++++ C +
Sbjct: 181 IHHRIIN-EGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVLLWTTMIAGCSQN 238
Query: 596 KNLDLGKIAAEKLLL 610
+ G + K+ L
Sbjct: 239 GQYEEGLLVFRKMDL 253
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/615 (36%), Positives = 342/615 (55%), Gaps = 68/615 (11%)
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
KK+H+ V++TG S ++ LL VGD
Sbjct: 28 KKIHAVVIRTGFSEKNSLLTQLLENLVLVGD----------------------------- 58
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
+ AR FD+M + + WN++ GY +N FE++ ++ M +D ++PD+FT
Sbjct: 59 --MCYARQVFDEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKM-RDLGVRPDEFTYPFV 115
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+ A + L L G +HA++++ F+ G V L+ Y
Sbjct: 116 VKAISQLGVLPCGVSLHAHVLKNGFECLGIVATELVMMY--------------------- 154
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+K G++ A +F+S++ +D+VAW A + Q G + A+E F M
Sbjct: 155 ------------MKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMC 202
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+ + +++T+ +MLS L SLD G++I+ A + ++ V NA + M+ K G+
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTE 262
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AAR +F+ + R VSW++MIV A +G EA+ LF M G++P+++T++GVL+AC
Sbjct: 263 AARVLFDDMKQRN-VVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSAC 321
Query: 525 THGGLVEQGQRYYNMMK--NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+H GLV +G+RY+++M N ++P H+A MVDLLGR+GLL+EAY FI+ M +EPD
Sbjct: 322 SHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDT 381
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
WG+LL AC VH+++ LG+ A+ L+ PD + L N+Y++ GKW+ +R M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ +G KK +S V+ K+H F D HPQ AIY K+ +I +I+ MG+VPDT SV
Sbjct: 442 RKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTGSVF 501
Query: 703 HDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDRE 762
HDVE + KE L HHSEKLAIAFGLI+ +R+MKNLR C+DCH KF+ +L RE
Sbjct: 502 HDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRLTSRE 561
Query: 763 IVVRDATRFHHFKKG 777
I++RD RFHHF+ G
Sbjct: 562 IIMRDKNRFHHFRNG 576
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 209/517 (40%), Gaps = 132/517 (25%)
Query: 11 SPL--EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+PL + + LL+++ S P K +HA +I+ G L L+ + YA+
Sbjct: 6 TPLTKQMLSELLRAS--SSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYAR 63
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+VFDEMP + WNT+ Y + N +P
Sbjct: 64 QVFDEMPKPRIFLWNTLFKGYVR-----------NQLPF--------------------E 92
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
++ ++ +M V P +FT V+ + + LG L G +H+ V+K G V L+
Sbjct: 93 SVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVATELVM 152
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
MY K G+ A+ +F+ M++K++ +WN +++ + +G NS
Sbjct: 153 MYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTG--------------------NSA 192
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I AL F M D +++ D FT+ S LSAC L L +G++I+ + E
Sbjct: 193 I-----------ALEYFNKMCAD-AVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEE 240
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
+ V NA + + K G E A+ + + + NV++++T++ GY GD G
Sbjct: 241 IECNIIVENARLDMHLKCGSTEAARVLFDD--MKQRNVVSWSTMIVGYAMNGDSG----- 293
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
+A+ LF M EG +PN T +LS S +
Sbjct: 294 --------------------------EALALFTMMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ GK+ + +R + + + R+E + M+
Sbjct: 328 NEGKRYFSLMVRLNDKN---------------------------LEPRKE--HYACMVDL 358
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
L + GL EEA + ++M ++PD + +L AC
Sbjct: 359 LGRSGLLEEAYEFIKKM---RVEPDTGIWGALLGACA 392
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 145/326 (44%), Gaps = 54/326 (16%)
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
M + +L+ SS KP + K+IHA +IRT F N+L+
Sbjct: 12 MLSELLRASSSKPKQL------------------KKIHAVVIRTGFSEK----NSLL--- 46
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
T LL+ + +GD+ AR++FD + + W +
Sbjct: 47 --------------------------TQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTL 80
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
GY +N L ++V L++ M G +P+ +T ++ S L L G +HA L++G
Sbjct: 81 FKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGF 140
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
V+ L+ MY K G +++A +F + + + V+W + I Q G A++ F
Sbjct: 141 ECLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFIAVCVQTGNSAIALEYFN 199
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M ++ D T V +L+AC G ++ G+ Y+ + +I+ + +D+ +
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARK-EEIECNIIVENARLDMHLKC 258
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLL 589
G + A ++M + +VV+W +++
Sbjct: 259 GSTEAARVLFDDMK-QRNVVSWSTMI 283
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ ++ R K + ++ ++N+ ++ + K S A+ +FD+M + + SW+T++ YA
Sbjct: 228 IGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYA 287
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ--DQVLPT 144
G A +F +M N + V++ ++ + G R F MV+ D+ L
Sbjct: 288 MNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEP 347
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ + + LG ++ + F+ K + + +LL A D ++ + V D
Sbjct: 348 RKEHYACMVDL--LGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACAVHRDMILGQKVAD 405
Query: 205 GM--RLKNVSSWNVVVS-LHIHSGR---LDLARAQFDQMIERDVVTWNSM 248
+ ++ S++V++S ++ +G+ +D R++ ++ + V ++S+
Sbjct: 406 VLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 259/768 (33%), Positives = 404/768 (52%), Gaps = 126/768 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA ++ GL +FL NS+ + YA+ + A++VFD + SWN +LS Y +
Sbjct: 121 GKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVR 180
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + EVF+LM R + W + F + S+
Sbjct: 181 AGAREETLEVFSLM-CRHGLGWNS------------------------------FALGSI 209
Query: 152 LASC------TALGDLSAGK---KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ C A GD+ G+ VH VVK GL + + +++++MYAK G A A+
Sbjct: 210 IKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVAL 269
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYS-QNGYDF-- 259
F K+V NV+V N+MIAG+ + D
Sbjct: 270 F-----KSVPDPNVIV--------------------------LNAMIAGFCREEAADVAR 298
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
EALG+++ L+ ++P +F+ +S L AC + GKQIH +++ F +G+AL
Sbjct: 299 EALGLYSE-LQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSAL 357
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
I Y+ G +E DGY R F SL +DVV
Sbjct: 358 IDLYSGSGCME-----------------------DGY----------RCFRSLPKQDVVI 384
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASAL 439
WT+++ G QN L ++A+ LF+ VR G +P+ + +S++++ +SLA G+QI A+
Sbjct: 385 WTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAV 444
Query: 440 RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAI 499
+SG ++ N+ I M +++G+++AA R F + R + VSW+++I + A HG +A+
Sbjct: 445 KSGFNRFTAMGNSFIHMCARSGDVDAATRRFQEMESR-DVVSWSAVISSHAHHGCARDAL 503
Query: 500 QLFERMLELGIK-PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVD 558
+F ML+ + P+ IT++ +LTAC+HGGLV++G RYY +M + + + PT H +VD
Sbjct: 504 CVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVD 563
Query: 559 LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGA 618
LLGRAG L +A FI + D V W SLL++CR+H +++ G++ A+K++ +EP +S +
Sbjct: 564 LLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSAS 623
Query: 619 YSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAI 678
Y L N+Y G+ A+ R MK GVKK G SW+++ + VH F D HP+ AI
Sbjct: 624 YVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAI 683
Query: 679 YNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH-HSEKLAIAFGLISTPENTTLR 737
Y K+A++ ++ + +EQ L HSEKLA+AFG+I P++ +R
Sbjct: 684 YRKVAEMVSKVAGI---------------SSREQDLAGCHSEKLAVAFGMIHLPQSAPIR 728
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+MKNLRVC DCHS ++ I K REI++RDA RFH F+ G CSC YW
Sbjct: 729 VMKNLRVCRDCHSTMELISKSERREIILRDAIRFHRFRDGSCSCGGYW 776
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/524 (21%), Positives = 227/524 (43%), Gaps = 101/524 (19%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+ + VH ++K GL +FL +++++ YAK +++ A +F +P + N +++ +
Sbjct: 230 IAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFC 289
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
++ D+A + A+ ++ E+ + P++F+ +S
Sbjct: 290 REEAADVA----------------------------REALGLYSELQSRGMQPSEFSFSS 321
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L +C G+ GK++H V+K G V + ++L+++Y+ G + DG R
Sbjct: 322 ILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSG------CMEDGYRC-- 373
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
F + ++DVV W S+I+G QN EAL +F ++
Sbjct: 374 -----------------------FRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVR 410
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
L+PD F ++S ++ACA+L + G+QI +++ F+ +GN+ I A+
Sbjct: 411 -CGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARS---- 465
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
GD+ A R F + RDVV+W+A++ + +
Sbjct: 466 -----------------------------GDVDAATRRFQEMESRDVVSWSAVISSHAHH 496
Query: 391 GLNKDAVELFRSMV--REGPKPNNYTLSAMLSVSSSLASLDHGKQIHA-SALRSGEASSL 447
G +DA+ +F M+ + P PN T ++L+ S +D G + + G + ++
Sbjct: 497 GCARDALCVFNEMLDAKVAP-PNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTI 555
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
++ + +AG + A + + V W S++ + HG E + +++++
Sbjct: 556 KHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMD 615
Query: 508 LGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
L +P +YV + G + + ++MK +K P
Sbjct: 616 L--EPTSSASYVILYNMYLDAGELSSASKTRDLMKE-RGVKKEP 656
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 13/253 (5%)
Query: 352 LLDGYIKIGDIGP--ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
LL Y ++G P A R+ D + R+ V++ ++V Y + GL ++ F
Sbjct: 40 LLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARV 99
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
+ +T +A L+ S + GK +HA + G + L +SN++ +MY++ G + ARRV
Sbjct: 100 VDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRV 159
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC----- 524
F+ R + VSW +++ + G EE +++F M G+ + ++ C
Sbjct: 160 FDAAEERDD-VSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSS 218
Query: 525 -THGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPD 581
G V G+ + V K F ++M+D+ + G L A +++P +P+
Sbjct: 219 YAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP-DPN 277
Query: 582 VVAWGSLLSA-CR 593
V+ ++++ CR
Sbjct: 278 VIVLNAMIAGFCR 290
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG---NINAARRVFNLIHWRQETV 480
S A+L H +HA R+ +SL + N L+ Y + G ++AAR + + R+ V
Sbjct: 11 SCAALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMP--RRNAV 68
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
S+ +IVA ++ GL ++ F R D TY L AC+ V G+ + M+
Sbjct: 69 SYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMV 128
Query: 541 --KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ + ASM G G + ++ E E D V+W +LLS
Sbjct: 129 VLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAE----ERDDVSWNALLSG 177
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 332/590 (56%), Gaps = 36/590 (6%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
++ +A GM L+N+ N +V + + LD A FD M RD V+W+ M+ G+++
Sbjct: 756 QVHXQASVHGM-LQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G G F +++ + +PD +TL + AC +L+ L++G+ IH + + D V
Sbjct: 815 GDYMNCFGTFRELIRCGA-RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFV 873
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
AL+ Y K +E AR +FD + +R
Sbjct: 874 CAALVDMYGKCREIE---------------------------------DARFLFDKMXER 900
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V WT M+ GY + G +++ LF M EG P+ + ++ + L ++ + I
Sbjct: 901 DLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTID 960
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
R + + A+I M++K G + +AR +F+ + + +SW++MI A HG G
Sbjct: 961 DYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQG 1019
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A+ LF ML GI P+ IT V +L AC+H GLVE+G R+++ M + ++ H+
Sbjct: 1020 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTC 1079
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VDLLGRAG L EA I +M E D WG+ L ACR HK++ L + AA LL ++P N
Sbjct: 1080 VVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQN 1139
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G Y L N+Y++ G+WED A IR M +KK G++W+++ NK H F V D HP+
Sbjct: 1140 PGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRS 1199
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY + + ++++ +G+VPDT VLHDV+E++K +L HSEKLAIAFGLI+TPE+T
Sbjct: 1200 KEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTP 1259
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLRVC DCH+ K + + R I+VRDA RFHHFK+G CSC DYW
Sbjct: 1260 IRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 307/548 (56%), Gaps = 36/548 (6%)
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
++ A+A GM L+N+ N ++ + + LD A FD M RD V+W+ M+ G+++
Sbjct: 80 QVHAQASVHGM-LENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G G F +++ + +PD +TL + AC +L+ L++G+ IH + + D
Sbjct: 139 GDYINCFGTFRELIRCGA-RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD----- 192
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
L+ L+D Y+K +I AR +FD +++R
Sbjct: 193 ----------------------------LDHFVCAALVDMYVKCREIEDARFLFDKMQER 224
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D+V WT M+ GY + G +++ LF M EG P+ + ++ + L ++ + I
Sbjct: 225 DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIID 284
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
R + + A+I MY+K G + +AR +F+ + + +SW++MI A HG G
Sbjct: 285 DYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQG 343
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+A+ LF ML G+ PD IT +L AC+H GLVE+G R+++ M + ++ H+
Sbjct: 344 RKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTC 403
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VDLLGRAG L EA I++M +E D WG+ L ACR HK++ L + AA LL ++ N
Sbjct: 404 VVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQN 463
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
G Y L N+Y++ G+WED A IR M +KKT G++W+++ NK H F V D HP+
Sbjct: 464 PGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRS 523
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
IY + + ++++ +G+VPDT VLHDV+E++K +L HSEKLAIAFGLI+TPE+T
Sbjct: 524 KEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTP 583
Query: 736 LRIMKNLR 743
+RI+KNLR
Sbjct: 584 IRIIKNLR 591
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 207/470 (44%), Gaps = 70/470 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y+ LD A +F+ M RDSVSW+ ++ + ++G + N F E+++
Sbjct: 98 NKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGAR 157
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +T+ V+ +C L +L G+ +H V K GL V +L++MY K + A+ +
Sbjct: 158 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 217
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M+ +++ +W V++ GY++ G E+L
Sbjct: 218 FDKMQERDLVTWTVMI-------------------------------GGYAECGKANESL 246
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + PDK + + + ACA L + + I YI R +F +G A+I
Sbjct: 247 VLFEKM-REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 305
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G VE AR IFD + +++V++W+A
Sbjct: 306 YAKCGCVE---------------------------------SAREIFDRMEEKNVISWSA 332
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y +G + A++LF M+ G P+ TL+++L S ++ G + +S
Sbjct: 333 MIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDY 392
Query: 443 EA-SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ + ++ + +AG ++ A ++ + ++ W + + A H A +
Sbjct: 393 SVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKA 452
Query: 502 FERMLELGIK-PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
+LEL + P H YV + + G E + ++M ++K TP
Sbjct: 453 ATSLLELQSQNPGH--YVLLSNIYANAGRWEDVAKIRDLMSQ-RRLKKTP 499
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 180/411 (43%), Gaps = 66/411 (16%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y+ LD A +F+ M RDSVSW+ ++ + ++G + N F E+++
Sbjct: 774 NKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 833
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +T+ V+ +C L +L G+ +H V K GL V +L++MY K + A+ +
Sbjct: 834 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 893
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M +++ +W V++ GY++ G E+L
Sbjct: 894 FDKMXERDLVTWTVMI-------------------------------GGYAECGNANESL 922
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + PDK + + + ACA L + + I YI R +F +G A+I
Sbjct: 923 VLFDKM-REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDM 981
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+AK G VE AR IFD + +++V++W+A
Sbjct: 982 HAKCGCVE---------------------------------SAREIFDRMEEKNVISWSA 1008
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ Y +G + A++LF M+R G PN TL ++L S ++ G + +
Sbjct: 1009 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDY 1068
Query: 443 EA-SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ ++ + +AG ++ A ++ + ++ W + + A H
Sbjct: 1069 SVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTH 1119
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 68/287 (23%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
+N +G+L+H + K GL L F+ +L++ Y K I A+ +FD+M
Sbjct: 174 KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQ----------- 222
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
RD V+WT +I Y E G+ ++ +F +M ++ V+P +
Sbjct: 223 --------------------ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKV 262
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+ +V+ +C LG + + + ++ + V + ++++MYAK G A+ +FD M
Sbjct: 263 AMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 322
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
KNV S W++MIA Y +G +AL +F
Sbjct: 323 EEKNVIS-------------------------------WSAMIAAYGYHGQGRKALDLFP 351
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA-----YIIRTE 308
ML S + PDK TLAS L AC++ ++ G + + Y +RT+
Sbjct: 352 MMLS-SGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTD 397
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 63/264 (23%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
+N +G+L+H + K GL L F+ +L++ Y K I A+ +FD+M
Sbjct: 850 KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMX----------- 898
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
RD V+WT +I Y E G ++ +F +M ++ V+P +
Sbjct: 899 --------------------ERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV 938
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+ +V+ +C LG + + + ++ + V + ++++M+AK G A+ +FD M
Sbjct: 939 AMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 998
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
KNV S W++MIA Y +G +AL +F
Sbjct: 999 EEKNVIS-------------------------------WSAMIAAYGYHGQGRKALDLFP 1027
Query: 267 NMLKDSSLKPDKFTLASTLSACAN 290
ML+ S + P+K TL S L AC++
Sbjct: 1028 MMLR-SGILPNKITLVSLLYACSH 1050
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 36/279 (12%)
Query: 387 YEQNGLN----KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+ Q LN ++ F + R PK + +SA+++ + L +Q+HA A G
Sbjct: 37 FRQTSLNLHNREEESSKFHFLQRLNPK---FYISALVNCRN----LTQVRQVHAQASVHG 89
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ V+N LI YS ++ A +F+ + R ++VSW+ M+ A+ G F
Sbjct: 90 MLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVGGFAKVGDYINCFGTF 148
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLL 560
++ G +PD+ T V+ AC ++ G+ +++ V+K HF A++VD+
Sbjct: 149 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI---VYKFGLDLDHFVCAALVDMY 205
Query: 561 GRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE-------- 612
+ +++A + M E D+V W ++ + GK A E L+L E
Sbjct: 206 VKCREIEDARFLFDKMQ-ERDLVTWTVMIGG-----YAECGK-ANESLVLFEKMREEGVV 258
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQ 651
PD A+ + +C K R Y+ KK Q
Sbjct: 259 PDK----VAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ 293
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+L +Q+H A G +L V+N L+ YS ++ A +F+ + R ++VSW+ M+
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVR-DSVSWSVMV 808
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
A+ G F ++ G +PD+ T V+ AC ++ G+ +++ V+K
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI---VYKF 865
Query: 547 KPTPSHF--ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
HF A++VD+ G+ +++A + M E D+V W ++
Sbjct: 866 GLDLDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGG 911
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/549 (40%), Positives = 320/549 (58%), Gaps = 34/549 (6%)
Query: 237 MIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKL 296
M V+W ++IA Y G+ EA+G+ A S ++PD FT L+ACA + L+
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGV-ARRAFASGMRPDSFTAVRVLTACARVADLET 59
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
G+ + A + E G++ +V T LD Y
Sbjct: 60 GEAVWAAARQEE-------------------------------GVAE-SVFVATAALDLY 87
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
+K G++ AR +FD +++RD VAW AM+ GY NG ++A++LF +M EG KP+ YT+
Sbjct: 88 VKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVV 147
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
LS + L +LD G+Q + + ALI MY+K G+ + A VF + R
Sbjct: 148 GALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLER 207
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRY 536
+ + W +MI+ L G + A L +M + G+K + T++G+L +CTH GLV G++Y
Sbjct: 208 -DIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQY 266
Query: 537 YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHK 596
++ M +V++I P H+ MVDL RAGLL+EA+ I +MP+ + V WG+LL C++H+
Sbjct: 267 FHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHR 326
Query: 597 NLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWV 656
N DL + A ++L+ +EP NSG Y L N+YS+ G+WEDAA +R MK G++K SWV
Sbjct: 327 NADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWV 386
Query: 657 QIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRH 716
++ KVH F V D HP D IY K+ ++ E+K MG+ P T V+ DVE + KE L H
Sbjct: 387 ELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVH 446
Query: 717 HSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK 776
HSEK+AIAF LI+T T+R+ KNLRVC DCHSAIK I ++ REIVVRD RFH F+
Sbjct: 447 HSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRD 506
Query: 777 GLCSCRDYW 785
G CSC DYW
Sbjct: 507 GHCSCNDYW 515
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 165/406 (40%), Gaps = 70/406 (17%)
Query: 105 MPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
MP+ +VSWT +I Y + G AI + + P FT VL +C + DL G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 165 KKVHSFVVKT-GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIH 223
+ V + + G++ V V + L++Y K G+
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGE---------------------------- 92
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
++ AR+ FD+M RD V W +M+ GY+ NG+ EAL +F M + + KPD +T+
Sbjct: 93 ---MEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGA-KPDCYTVVG 148
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
LSAC L L LG+Q + E +G ALI YAK G
Sbjct: 149 ALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTS------------- 195
Query: 344 LNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM 403
A +F + +RD++ W AM++G G K A L M
Sbjct: 196 --------------------EAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQM 235
Query: 404 VREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSVSNALITMYSKAGN 462
+ G K N+ T +L + ++ G+Q H + + ++ ++S+AG
Sbjct: 236 KKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGL 295
Query: 463 INAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERM 505
+ A ++ + V W +++ H L E A++ R+
Sbjct: 296 LEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRL 341
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
L Y K G ++ A VF+ M NRD+V+W ++ Y G + A+ +F M + P
Sbjct: 84 LDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDC 143
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
+TV L++CT LG L G++ V + G + +L++MYAK G A VF
Sbjct: 144 YTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVF-- 201
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
QM+ERD++ WN+MI G G++ A +
Sbjct: 202 -----------------------------QQMLERDIIVWNAMILGLGMTGHEKIAFALV 232
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ-----IHAYIIRTEFDATGPVGNALI 320
M K S +K + T L +C + + G+Q H Y I + G ++
Sbjct: 233 GQM-KKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYG----CMV 287
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
+++ G +E A +++ + N + + LL G
Sbjct: 288 DLFSRAGLLEEAHQLIGDMPM-LANAVVWGALLGG 321
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/371 (51%), Positives = 261/371 (70%), Gaps = 1/371 (0%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
++ +L +S+A+L+ GKQ+HA ++ G +SVSN L+ MY K G I A+ VF+ +
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKL- 59
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQ 534
+ SW +MI LAQHG G+EA+ LFE+ML+ G+KP+ IT+V VL+ C+H GLV++G+
Sbjct: 60 LEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGR 119
Query: 535 RYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRV 594
Y++ M H I P H++ MVDL GRAG L EA NFI MP+EP+ WGSLL ACRV
Sbjct: 120 NYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRV 179
Query: 595 HKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFS 654
H N++L + A E+L+ + P+N G Y L N+Y++ G+W+DA +RK MK VKK G S
Sbjct: 180 HGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCS 239
Query: 655 WVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQML 714
W+++QNKVH F V D HPQ + IY + + ++K G++P+T VLHDVEE+ KE +L
Sbjct: 240 WIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWIL 299
Query: 715 RHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHF 774
HHSEKLAIAFG+ISTP TT+R++KNLRVC DCH+A KFI ++V REIV+RD RFHHF
Sbjct: 300 GHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHF 359
Query: 775 KKGLCSCRDYW 785
K G CSC DYW
Sbjct: 360 KDGQCSCGDYW 370
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 38/273 (13%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
+A L ACA++ L+ GKQ+HA II+ F+ V N L+
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLV-------------------- 40
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
D Y K G I A+ +F L + DV +W AM+ G Q+G K+AV LF
Sbjct: 41 -------------DMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLF 87
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSK 459
M++ G KPN T +LS S +D G+ S R G + + ++ ++ +
Sbjct: 88 EQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGR 147
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI-TYV 518
AG ++ A N + W S++ A HG E A + E+++EL P++ TYV
Sbjct: 148 AGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIEL--TPENPGTYV 205
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPS 551
+ G + + MMK+ +K P
Sbjct: 206 LLSNIYAAAGRWDDAGKVRKMMKD-RSVKKEPG 237
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 26/244 (10%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ +L +C ++ L GK+VH+ ++K G V+V+N L++MY K G A+ VF +
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALG 263
+V+SWN ++S G A F+QM++ V +T+ +++G S G E
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 264 MFANMLKDSSLKP---------DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
F +M +D + P D F A L N +I + +
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALN------------FINQMPVEPNAS 168
Query: 315 VGNALISCYAKVGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
V +L+ G +E+A++ VEQ ++ N + L + Y G A ++ ++
Sbjct: 169 VWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMK 228
Query: 374 DRDV 377
DR V
Sbjct: 229 DRSV 232
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA IIK G L V + N L++ Y K
Sbjct: 17 GKQVHADIIKIGFELDVSVSNGLVDMYGKC------------------------------ 46
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
GR++ A EVF+ + D SW +I + G K A+ +F +M+Q V P Q T V
Sbjct: 47 -GRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVV 105
Query: 152 LASCTALGDLSAGKK-VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L+ C+ G + G+ S G+S + +++++ + G A + M ++
Sbjct: 106 LSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEP 165
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIE---RDVVTWNSMIAGYSQNGYDFEALGMFA 266
N S W ++ G ++LA +Q+IE + T+ + Y+ G ++ G
Sbjct: 166 NASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGR-WDDAGKVR 224
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
M+KD S+K + C+ +E + ++H +I+
Sbjct: 225 KMMKDRSVKKE--------PGCSWIE---VQNKVHPFIV 252
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 361/619 (58%), Gaps = 18/619 (2%)
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL-KNVSSWNVVVSLHIHSGRLDLA 230
+ T L GC N+T + ++A++ + ++ + +L + ++ N+ V +
Sbjct: 49 IVTTLDGCKNLTQ-IKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPY--------P 99
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
+ F+Q+ + +N++I GY E+ ++ M K+ + P FT + AC
Sbjct: 100 LSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVV-PVSFTFTALFKACGA 158
Query: 291 LEKLKLGKQIHAY-IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ LG+QIH I+ F VGN++I Y K G +E +K+ ++ + +VI++
Sbjct: 159 KMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDE--MPNRDVISW 216
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T L+ Y+K G++ A +FD L +D+VAWT M+ G+ QN ++A+ F M G +
Sbjct: 217 TELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVE 276
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRS--GEASSLSVSNALITMYSKAGNINAAR 467
+ TL ++S + L + + I A +S G S+ V +ALI MYSK G++ A
Sbjct: 277 TDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAY 336
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
RVF + R S++SMI+ A HG +A++LF+ M++ IKP+ +T++GVLTAC+H
Sbjct: 337 RVFQGMKERN-VYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHA 395
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G+VEQG + + +M+ + IKP+ H+ MVDLLGRAG LQEA+ ++ MP+EP WG+
Sbjct: 396 GMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGA 455
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LL ACR+HK+ D+ IAA L +EP G Y L N+Y+SCG+W D + +RK M+ G+
Sbjct: 456 LLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGL 515
Query: 648 KKTQGFSWVQIQNK-VHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+K FSW++ + VH F D HP+ I + + D ++ G+ P +SV +DV
Sbjct: 516 RKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVN 575
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
++ K ++L HSEKLA+AFGLIST + +RI+KNLR+C DCHS I ++ REI+VR
Sbjct: 576 DEDKRRILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVR 635
Query: 767 DATRFHHFKKGLCSCRDYW 785
D RFHHF G+CSC ++W
Sbjct: 636 DIMRFHHFHDGICSCGNFW 654
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 205/464 (44%), Gaps = 67/464 (14%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K VHARI+ GL S ++ L ++TL N + Y
Sbjct: 63 KQVHARILLNGLDQSCYVLAKL---------------------IRTLTKLNIPVDPYP-- 99
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
+FN + + + +I Y R K + + M ++ V+P FT T++
Sbjct: 100 ------LSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALF 153
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSG-CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+C A D+ G+++H + G G ++V NS+++MY K G + VFD M ++V
Sbjct: 154 KACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDV 213
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW ++S ++ SG ++ A FD + +D+V W M++G++QN EA+ MF +++
Sbjct: 214 ISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAI-MFFEKMQE 272
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--VGNALISCYAKVGGV 329
++ D+ TL +SACA L K I ++EF VG+ALI Y+K G V
Sbjct: 273 FGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSV 332
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
G A R+F +++R+V ++++M++G+
Sbjct: 333 ---------------------------------GDAYRVFQGMKERNVYSYSSMILGFAM 359
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLS 448
+G DA++LF MV+ KPN T +L+ S ++ G QI + G S
Sbjct: 360 HGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSAD 419
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
++ + +AG + A + + W +++ A H
Sbjct: 420 HYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIH 463
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 145/281 (51%), Gaps = 10/281 (3%)
Query: 10 ISPLEF-YAHLLQSNLKSRNPFVGKLVHAR-IIKCGLHLSVFLKNSLMNFYAKTESISYA 67
+ P+ F + L ++ + +G+ +H + I+ G + + NS+++ Y K +
Sbjct: 142 VVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECG 201
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+KVFDEMP + + SW ++SAY K G ++ A E+F+ +P +D V+WT ++ + + + +
Sbjct: 202 RKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPR 261
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSG--CVNVTNS 185
AI F +M + V + T+ V+++C LG + K+ G V V ++
Sbjct: 262 EAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSA 321
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV--- 242
L++MY+K G A VF GM+ +NV S++ ++ GR+ A FD+M++ ++
Sbjct: 322 LIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPN 381
Query: 243 -VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP--DKFT 280
VT+ ++ S G + +F M K +KP D +T
Sbjct: 382 RVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYT 422
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/761 (32%), Positives = 389/761 (51%), Gaps = 135/761 (17%)
Query: 11 SPLEFY-AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
+P EF A L++ +SR G+ VH ++ GL +V++ +L+N YAK
Sbjct: 111 APNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKV-------- 162
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
G +D A VF+ +P ++ V+WT +I Y++IG+ A
Sbjct: 163 -----------------------GCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVA 199
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+ +F +M D V P +F + S +++C+ALG L G++ H + + + +V N+L+++
Sbjct: 200 LELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDL 259
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
Y K RL LAR FD M R++V+W +MI
Sbjct: 260 YCKCS-------------------------------RLSLARKLFDCMENRNLVSWTTMI 288
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
AGY QN D EA+ MF L +PD F AS L++C +L + G+Q+HA+ I+
Sbjct: 289 AGYMQNSCDAEAMAMFWQ-LSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANL 347
Query: 310 DATGPVGN-------------------------------ALISCYAKVG----------- 327
++ V N A+I Y+++G
Sbjct: 348 ESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSK 407
Query: 328 -----------------GVEIAQKIVE----------QSGISYLNVIAFTTLLDGYIKIG 360
GV +Q +E +SG S L++ A ++L+D Y K
Sbjct: 408 MRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTS-LDLYAGSSLIDVYSKFS 466
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
+ A+ +F+ + +RD+V W AM+ G QN ++AV+LF + G PN +T A+++
Sbjct: 467 LVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVT 526
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
V+S+L S+ HG+Q HA +++G S VSNALI MY+K G I R +F ++ +
Sbjct: 527 VASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFEST-LGKDVI 585
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
W SMI AQHG EEA+ +F M G++P+++T+VGVL+AC H GLV++G R+++ M
Sbjct: 586 CWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFM 645
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
K + I+P H+AS+V+L GR+G L A FIE MP+EP W SLLSAC + N+++
Sbjct: 646 KTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEI 705
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G+ A E LL +P +SG + N+Y+S G W DA +R+ M GV K G+SW+++
Sbjct: 706 GRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMK 765
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASV 701
+VH F HP+ D IY+ + ++ +K G++PDT+ +
Sbjct: 766 EVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPDTSEL 806
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 264/563 (46%), Gaps = 111/563 (19%)
Query: 34 LVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQG 93
L HAR + G +FL N L+ Y+K + A+++FD MP K L SW + +S +A+ G
Sbjct: 32 LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHG 91
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV--EMVQDQVLPTQFTVTSV 151
CE ++A+ +F + P +F + S
Sbjct: 92 -----CE--------------------------EDAVALFAAFQRASGGEAPNEFLLASA 120
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C +S G++VH V+ GL G V V +L+N+YAKVG A VFD + +KN
Sbjct: 121 LRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNP 180
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+W V++ GYSQ G AL +F M D
Sbjct: 181 VTWTAVIT-------------------------------GYSQIGQGGVALELFGKMGLD 209
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
++PD+F LAS +SAC+ L L+ G+Q H Y R + V NALI Y K + +
Sbjct: 210 -GVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSL 268
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+K+ FD + +R++V+WT M+ GY QN
Sbjct: 269 ARKL---------------------------------FDCMENRNLVSWTTMIAGYMQNS 295
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ +A+ +F + +EG +P+ + +++L+ SLA++ G+Q+HA A+++ S V N
Sbjct: 296 CDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKN 355
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+LI MY+K ++ AR VF + + +S+ +MI ++ G AI +F +M +K
Sbjct: 356 SLIDMYAKCEHLTEARAVFEALA-EDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLK 414
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEA 569
P +T+V +L + +E ++ + + + K + +A S++D+ + L+++A
Sbjct: 415 PSPLTFVSLLGVSSSQSAIELSKQIHGL---IVKSGTSLDLYAGSSLIDVYSKFSLVEDA 471
Query: 570 ---YNFIENMPLEPDVVAWGSLL 589
+N + N D+V W +++
Sbjct: 472 KAVFNLMHNR----DMVIWNAMI 490
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 169/367 (46%), Gaps = 70/367 (19%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE--GPK 409
LL Y K+G + ARR+FD + +++V+W + + + Q+G +DAV LF + R G
Sbjct: 52 LLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEA 111
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
PN + L++ L + ++ G+Q+H A+R G ++ V ALI +Y+K G I+AA V
Sbjct: 112 PNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLV 171
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ + + V+WT++I +Q G G A++LF +M G++PD ++AC+ G
Sbjct: 172 FDALPVKN-PVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGF 230
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDL---LGRAGLLQEAYNFIENMPL-------- 578
+E G++ + + ++ S +++DL R L ++ ++ +EN L
Sbjct: 231 LEGGRQTHGYAYRI-AVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIA 289
Query: 579 -----------------------EPDVVAWGSLLSAC----------RVH-----KNLDL 600
+PDV A S+L++C +VH NL+
Sbjct: 290 GYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLES 349
Query: 601 GKIAAEKLL-----------------LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
+ L+ + D++ +Y+A+ YS G A ++ M+
Sbjct: 350 DEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMR 409
Query: 644 YVGVKKT 650
Y +K +
Sbjct: 410 YCSLKPS 416
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
HA A+ +G L ++N L+ YSK G + ARR+F+ + + VSW S I AQHG
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMP-HKNLVSWGSAISMHAQHGC 92
Query: 495 GEEAIQLFERMLEL--GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
E+A+ LF G P+ L AC V GQ+ + + + +
Sbjct: 93 EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRI-GLDGNVYV 151
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
++++L + G + A + +P++ + V W ++++ + + G +A E
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVK-NPVTWTAVITG---YSQIGQGGVALE 201
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/761 (33%), Positives = 399/761 (52%), Gaps = 129/761 (16%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VH +I GL V + N L+N YAK SI+ A++
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR--------------------- 370
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VF M +DSVSW ++I ++ F A+ + M + ++LP FT+ S
Sbjct: 371 ----------VFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLIS 420
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++SC +L G+++H +K G+ N
Sbjct: 421 SISSCASLKWAKLGQQIHGESLKLGID-------------------------------LN 449
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EALGMFANML 269
VS N +++L+ +G L+ R F M E D V+WNS+I + + EA+ F N L
Sbjct: 450 VSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNAL 509
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + K ++ T +S LSA ++L +LGKQIH ++ NALI+CY K G +
Sbjct: 510 R-AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEM 568
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR-DVVAWTAMLVGYE 388
+ +K IF + +R D V W +M+ GY
Sbjct: 569 DGCEK---------------------------------IFSRMSERRDDVTWNSMISGYI 595
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
N L A++L M++ G + +++ + +LS +S+A+L+ G ++HA ++R+ S +
Sbjct: 596 HNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM-LE 507
V +AL+ MYSK G ++ A R FN + LF M L+
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFN--------------------------TMPLFANMKLD 689
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
PDH+T+VGVL+AC+H GL+E+G +++ M + + + P HF+ M DLLGRAG L
Sbjct: 690 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELD 749
Query: 568 EAYNFIENMPLEPDVVAWGSLLSAC-RVH-KNLDLGKIAAEKLLLIEPDNSGAYSALCNL 625
+ +FIE MP++P+V+ W ++L AC R + + +LGK AAE L +EP+N+ Y L N+
Sbjct: 750 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 809
Query: 626 YSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKI 685
Y++ G+WED RK MK VKK G+SWV +++ VH+F D HP D IY K+ ++
Sbjct: 810 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 869
Query: 686 WDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT-TLRIMKNLRV 744
++++ G+VP T L+D+E++ KE++L +HSEKLA+AF L + +T +RIMKNLRV
Sbjct: 870 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 929
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCHSA K I K+ R+I++RD+ RFHHF+ G CSC D+W
Sbjct: 930 CGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDFW 970
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 150/590 (25%), Positives = 251/590 (42%), Gaps = 115/590 (19%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
PL F +QS + R KL H+R+ K GL V+L N+L+N Y +T A+KV
Sbjct: 6 PLSF----VQSCIGHRG--AAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKV- 58
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
F+ MP R+ VSW ++ Y+ G K A+
Sbjct: 59 ------------------------------FDEMPLRNCVSWACVVSGYSRNGEHKEALV 88
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSA--GKKVHSFVVKTGLSGCVNVTNSLLNM 189
+MV++ V + S L +C L + G+++H + K + V+N L++M
Sbjct: 89 FLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISM 148
Query: 190 YAKVGDEM-MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y K G + A FD +++KN SWN ++S+
Sbjct: 149 YWKCGGSLGYALRAFDDVQVKNSVSWNSIISV---------------------------- 180
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK--LKLGKQIHAYIIR 306
YSQ G A MF +M D S +P ++T S ++ +L + ++L +QI I +
Sbjct: 181 ---YSQTGDQRFAFKMFYSMQCDGS-RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ F VG+ L+S +AK G + A R
Sbjct: 237 SGFLTDLFVGSGLVSAFAKSGSLIHA---------------------------------R 263
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF---RSMVREGPKPNNYTLSAMLSVS- 422
+IF+ + R+ V ++VG + ++A +LF SM+ P+ LS+ S
Sbjct: 264 KIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 423 SSLASLDHGKQIHASALRSGEASSL-SVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L G+++H + +G + + N L+ MY+K G+I ARRVF + +++VS
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMT-EKDSVS 382
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W SMI L Q+ EA++ ++ M I P T + +++C + GQ+ +
Sbjct: 383 WNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESL 442
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ I S +++ L G L E +MP E D V+W S++ A
Sbjct: 443 KL-GIDLNVSVSNALMTLYAETGCLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 144/333 (43%), Gaps = 70/333 (21%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +LIS + A L + L G+ +H +K G+ L+V + N+LM YA+T
Sbjct: 413 PGSFTLISSISSCASLKWAKL-------GQQIHGESLKLGIDLNVSVSNALMTLYAETGC 465
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
++ +K+F MP SWN+I+ A A R +P +
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALASSER---------SLP--------------EAV 502
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F NA+R ++ F+ S + G+L GK++H +K ++
Sbjct: 503 ACFLNALR-----AGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKYNIADEATTE 555
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE-RDV 242
N+L+ Y K G+ +D F +M E RD
Sbjct: 556 NALIACYGKCGE-------------------------------MDGCEKIFSRMSERRDD 584
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
VTWNSMI+GY N +AL + M++ + + D F A+ LSA A++ L+ G ++HA
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMMQ-TGQRLDSFMYATVLSAFASVATLERGMEVHA 643
Query: 303 YIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
+R ++ VG+AL+ Y+K G ++ A +
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/455 (43%), Positives = 300/455 (65%), Gaps = 3/455 (0%)
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+AQK+ + IS N++ T ++ GY ++G + AR IFD + ++D+V W+AM+ GY ++
Sbjct: 1 MAQKLFTK--ISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAES 58
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
++A+ LF M G KP+ T+ +++S + L LD K IH ++G +L V+
Sbjct: 59 DKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVN 118
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NALI MY+K GN+ AAR VF + R +SWTSMI A A HG A++ F +M + I
Sbjct: 119 NALIDMYAKCGNLGAARGVFEKMQSRN-VISWTSMINAFAIHGDASNALKFFYQMKDENI 177
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T+VGVL AC+H GLVE+G+R + M N H I P H+ MVDL GRA LL++A
Sbjct: 178 KPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDAL 237
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+E MPL P+VV WGSL++AC++H +LG+ AA+++L +EPD+ GA L N+Y+
Sbjct: 238 ELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDR 297
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
+W+D +R MK G+ K +G S +++ N+V+ F + D H Q D IY K+ ++ E+K
Sbjct: 298 RWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELK 357
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
+G+ P+T SVL DVEE+ K++++ HSEKLA+ +GL+ + + +RI+KNLRVC DCH+
Sbjct: 358 LVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHT 417
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IK + K+ EI+VRD TRFHH+K G+CSC DYW
Sbjct: 418 FIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 37/318 (11%)
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
MA+ +F + +N+ ++S + GR++ AR FDQM E+D+V W++MI+GY+++
Sbjct: 1 MAQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDK 60
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL +F+ M + +KPD+ T+ S +SACA L L K IH Y+ + PV N
Sbjct: 61 PQEALNLFSEM-QVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNN 119
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
ALI YAK G + A+ + E+ + NVI++T++++ + GD A + F ++D ++
Sbjct: 120 ALIDMYAKCGNLGAARGVFEK--MQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENI 177
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
KPN T +L S ++ G++ AS
Sbjct: 178 -------------------------------KPNGVTFVGVLYACSHAGLVEEGRRTFAS 206
Query: 438 ALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
+ ++ ++ +A + A + + V W S++ A HG E
Sbjct: 207 MTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHGENE 266
Query: 497 EAIQLFERMLELGIKPDH 514
+++LEL +PDH
Sbjct: 267 LGEFAAKQVLEL--EPDH 282
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 32/236 (13%)
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
A+K+F ++ + L ++S Y++ GR++ A +F+ M +D V W+ +I Y E +
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 127 KNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+ A+ +F EM + P Q T+ SV+++C LG L K +H +V K GL G + V N+L
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MYAK G+ A+ VF+ M+ +N V++W
Sbjct: 122 IDMYAKCGNLGAARGVFEKMQSRN-------------------------------VISWT 150
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
SMI ++ +G AL F M KD ++KP+ T L AC++ ++ G++ A
Sbjct: 151 SMINAFAIHGDASNALKFFYQM-KDENIKPNGVTFVGVLYACSHAGLVEEGRRTFA 205
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 38/155 (24%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +H + K GL ++ + N+L++ YAK ++ A+ VF++M + + SW ++++A+A
Sbjct: 100 KWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIH 159
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
G NA++ F +M + + P T VL
Sbjct: 160 GDAS-------------------------------NALKFFYQMKDENIKPNGVTFVGVL 188
Query: 153 ASCTALGDLSAGKKV-------HSFVVKTGLSGCV 180
+C+ G + G++ H+ K GC+
Sbjct: 189 YACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCM 223
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/574 (40%), Positives = 348/574 (60%), Gaps = 7/574 (1%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
N+++ ++ GRL AR F+ M R+V TW +A +S NG EAL F M + S
Sbjct: 101 NLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQ-SGE 159
Query: 275 KPDKFTLASTLSACANLEKLKL--GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
+PD+ T + L+A A + + G++IH Y + VG A+IS Y K G ++ A
Sbjct: 160 RPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDA 219
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
+ E+ + + N + + ++ Y G A +F + D D V W AM+ Y Q+G
Sbjct: 220 RAAFEE--LQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGR 277
Query: 393 NKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
K A++L+RSM P T ++ V + L++L G+ IHA + ++L VSN
Sbjct: 278 GKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSN 337
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
AL+ MY K G ++ A VF+ + + E +SW ++I + A HG ++A+ L++ M G+K
Sbjct: 338 ALVHMYGKCGCLDEALDVFHSMKLKDE-ISWNTIISSYAYHGHSDQALLLYQEMDLQGVK 396
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
P +T+VG+L+AC+HGGLV G Y+ M++ H+IKP+ HF ++DLLGR G L EA
Sbjct: 397 PTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAEL 456
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
+++MP++ + V W SLL AC+ H +L G AA++++ P SG Y L N+Y++ G+
Sbjct: 457 VLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGR 516
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+D IRK M GVKK+ G SW++I + VH F D HPQ + IY ++ K+ +E+K
Sbjct: 517 WKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKG 576
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
+G+VPDT+SV HD+EE+ KE +L HSEKLAI +G + P + LRI+KNLRVC DCH+A
Sbjct: 577 LGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTA 636
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KF+ ++ R+IVVRDA RFH F+ G CSCRDYW
Sbjct: 637 TKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 670
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 194/415 (46%), Gaps = 38/415 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y K GRL A E+F MP+R+ +WT + ++ G A+ F M Q
Sbjct: 101 NLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGER 160
Query: 143 PTQFTVTSVLASCTALGD--LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
P + T + +LA+ +G + G+++H + +GL V V ++++MY K G A+
Sbjct: 161 PDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDAR 220
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
A F+ ++ KN +WN +++ + GR A F +M + D V WN+MIA Y+Q+G +
Sbjct: 221 AAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQ 280
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
AL ++ +M + L P + T + + CA L LK G+ IHA + T FDA V NAL+
Sbjct: 281 ALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALV 340
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
Y K G ++ A LD +F S++ +D ++W
Sbjct: 341 HMYGKCGCLDEA--------------------LD-------------VFHSMKLKDEISW 367
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
++ Y +G + A+ L++ M +G KP T +LS S + G + ++
Sbjct: 368 NTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD-YFYRMQ 426
Query: 441 SGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
SV + +I + + G + A V + + V W S++ A HG
Sbjct: 427 DDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHG 481
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 5/250 (2%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H GL +V + ++++ Y K + A+ F+E+ K +WN +++ Y
Sbjct: 184 GREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKL 243
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTS 150
GR A E+F M + DSV W +I Y + GR K A+ ++ M L P Q T +
Sbjct: 244 DGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVT 303
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
V+ C L L G+ +H+ V T + V+N+L++MY K G A VF M+LK+
Sbjct: 304 VIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKD 363
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
SWN ++S + + G D A + +M ++ VT+ +++ S G + L F
Sbjct: 364 EISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFY 423
Query: 267 NMLKDSSLKP 276
M D +KP
Sbjct: 424 RMQDDHRIKP 433
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 123/259 (47%), Gaps = 14/259 (5%)
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
E+ L+K +++L S E P Y +A++ + ++ +++H+ L ++S
Sbjct: 40 ERESLHK-SIQLLESRELE-LDPVGY--AALIRRCGAANAISAARRLHSHILSLPHSNSQ 95
Query: 448 S--VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
++N LI MY K G + AR +F + R +WT + A + +G EA+ F RM
Sbjct: 96 PPFLANLLIEMYGKCGRLPYARELFESMPSRN-VHTWTVAMAAFSHNGCHSEALVFFRRM 154
Query: 506 LELGIKPDHITYVGVL--TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+ G +PD +T+ +L A ++QG+ + + + + P +++ + G+
Sbjct: 155 YQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYAR-ISGLLPNVVVGTAVISMYGKC 213
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L +A E + + + V W ++++ ++ + A E + +S ++A+
Sbjct: 214 GRLDDARAAFEELQWK-NSVTWNAMMTNYKLDGR---DREALELFREMHDADSVCWNAMI 269
Query: 624 NLYSSCGKWEDAANIRKSM 642
Y+ G+ + A ++ +SM
Sbjct: 270 AAYAQHGRGKQALDLYRSM 288
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/546 (39%), Positives = 316/546 (57%), Gaps = 35/546 (6%)
Query: 241 DVVTWNSMIAGYSQNGYDFE-ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
D +N++I Y+Q G+ + AL ++ ML D+ L P+KFT L ACA LE L LG+
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAIL-PNKFTYPFVLKACAGLEVLNLGQT 153
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
+H +++ FD V N ++ Y+ G
Sbjct: 154 VHGSVVKFGFDCDIHVQNTMVHMYSCCAG------------------------------- 182
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
I AR++FD + D V W+AM+ GY + G + +AV LFR M P+ T+ +ML
Sbjct: 183 -GINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSML 241
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S + L +L+ GK I A R + VSNALI M++K G+I+ A ++F ++ +
Sbjct: 242 SACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMN-EKTI 300
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSWTS+IV +A HG G+EA LFE M G+ PD + ++G+L+AC+H GLVE+G+ Y+
Sbjct: 301 VSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGS 360
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M +K+ P H+ MVD+ R GL++EA F+ NMP+EP+ V +L+SACR H
Sbjct: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LG+ + L+ EP + Y L N+Y+ WE IR+ M+ G+KK G + ++I
Sbjct: 421 LGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
N+++ F D H Q IY + ++ E+K+ G+ P T+ VL D+ E+ KE L HSE
Sbjct: 481 NEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSE 540
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGL+ TP T +RI+KNLRVC+DCHSA KFI K+ DREI++RD RFHHFK G C
Sbjct: 541 KLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
Query: 780 SCRDYW 785
SC D+W
Sbjct: 601 SCGDFW 606
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 183/399 (45%), Gaps = 69/399 (17%)
Query: 109 DSVSWTTIIVTYNEIGRFKN-AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV 167
D+ + T+I Y + G K+ A+ ++ M+ D +LP +FT VL +C L L+ G+ V
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 168 HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRL 227
H VVK G ++V N++++MY+ +G +
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCC------------------------------AGGI 184
Query: 228 DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+ AR FD+M + D VTW++MI GY++ G EA+ +F M + + + PD+ T+ S LSA
Sbjct: 185 NSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREM-QMAEVCPDEITMVSMLSA 243
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C +L L+LGK I AYI R E V NALI +AK
Sbjct: 244 CTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKC--------------------- 282
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
GDI A ++F ++ ++ +V+WT+++VG +G ++A LF M G
Sbjct: 283 ------------GDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSG 330
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNINAA 466
P++ +LS S ++ G++ S ++ + + ++ MY + G + A
Sbjct: 331 VAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEA 390
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLF 502
+ V +++ A HG LGE+ +L
Sbjct: 391 LEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLL 429
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 163/369 (44%), Gaps = 85/369 (23%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES-ISYAKKVFDEMPVKTLCSWNTILSAY 89
+G+ VH ++K G + ++N++++ Y+ I+ A+KVFDE
Sbjct: 150 LGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDE---------------- 193
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
MP DSV+W+ +I Y +GR A+ +F EM +V P + T+
Sbjct: 194 ---------------MPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMV 238
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L++CT LG L GK + +++ + + V V+N+L++M+AK GD A +F M K
Sbjct: 239 SMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEK 298
Query: 210 NVSSWNVVV---SLH--------------------------------IHSGRLDLARAQF 234
+ SW V+ ++H HSG ++ R F
Sbjct: 299 TIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYF 358
Query: 235 DQMIER-----DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
M+++ + + M+ Y + G EAL NM ++P+ L + +SAC
Sbjct: 359 GSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNM----PIEPNPVILRTLVSACR 414
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNA----LISCYAKVGGVEIAQKIVEQSGISYLN 345
+ KLG++I +++ E P+ + L + YAK E KI E + +
Sbjct: 415 GHGEFKLGEKITKLLMKHE-----PLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMK 469
Query: 346 VIAFTTLLD 354
+ +T+++
Sbjct: 470 KVPGSTMIE 478
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/637 (36%), Positives = 354/637 (55%), Gaps = 67/637 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L CT+L +L K++ +F +KT L ++V +N
Sbjct: 25 SLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINF-------------------- 61
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
SL+ + + A FDQ+ + D+V +N+M GY++ A +F +L
Sbjct: 62 --------CSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQIL 113
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
S L PD +T S L ACA+ + L+ G+Q+H I K+G
Sbjct: 114 F-SGLFPDDYTFPSLLKACASCKALEEGRQLHCLAI-------------------KLGLS 153
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E NV TL++ Y ++ ARR+FD + + VV + AM+ GY +
Sbjct: 154 E--------------NVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYAR 199
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+A+ LFR + KP + T+ ++LS + L +LD GK +H ++G + V
Sbjct: 200 GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKV 259
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
ALI MY+K G+++ A VF + R +T +W++MI+A A HG G +A+ LF+ M + G
Sbjct: 260 DTALIDMYAKCGSLDDAVCVFENMAVR-DTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG 318
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
+PD IT++G+L AC+H GLVE+G Y+ M++ + + P H+ MVDLLGRAG L+EA
Sbjct: 319 TEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEA 378
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y FI +P+ P + W +LLSAC H N++LGK E++ ++ + G Y L NL +
Sbjct: 379 YEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARA 438
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+WED +RK M GV K G S V++ N VH F D +H ++ + ++ E+
Sbjct: 439 GRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKEL 498
Query: 690 KEMGFVPDTASVLH-DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
K +G+VP+T+ V H D+E++ KE LR+HSEKLAI FGL++TP TT+R++KNLRVC DC
Sbjct: 499 KLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDC 558
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
HSA K I + DR+I++RD RFHHFK G CSC DYW
Sbjct: 559 HSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 195/480 (40%), Gaps = 100/480 (20%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYA---KTESISYAKKVFDEMPVKTLCSWNTILSAY 89
K + A IK LH + + +NF + T S+ +A +FD++P + +NT+ Y
Sbjct: 37 KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGY 96
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A R D F L F +++ + P +T
Sbjct: 97 A---RTDTPLRAFTL----------------------------FTQILFSGLFPDDYTFP 125
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +C + L G+++H +K GLS V V +L+NMY + A+ VFD +
Sbjct: 126 SLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI--- 182
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
W E VVT+N+MI GY++ EAL +F L
Sbjct: 183 ----W------------------------EPCVVTYNAMITGYARGSRPNEALSLFRE-L 213
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ +LKP T+ S LS+CA L L LGK +H Y+ + F+ V ALI YAK G +
Sbjct: 214 QARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSL 273
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ A + E + RD AW+AM++ Y
Sbjct: 274 DDAVCVFENMAV---------------------------------RDTQAWSAMIMAYAI 300
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASSLS 448
+G AV LF+ M + G +P+ T +L S ++ G + + + G +
Sbjct: 301 HGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIK 360
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ + +AG + A + R + W +++ A HG E ++ E++ EL
Sbjct: 361 HYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFEL 420
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 38/311 (12%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ +H IK GL +V++ +L+N Y + A++VFD++ + ++N +++ YA+
Sbjct: 140 GRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYAR 199
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R PN A+ +F E+ + PT T+ SV
Sbjct: 200 GSR-----------PNE--------------------ALSLFRELQARNLKPTDVTMLSV 228
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L+SC LG L GK +H +V K G + V V +L++MYAK G A VF+ M +++
Sbjct: 229 LSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDT 288
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+W+ ++ + G A + F +M E D +T+ ++ S G E F
Sbjct: 289 QAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYG 348
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + P + +L ++ + +I+ T + L+S G
Sbjct: 349 MRDKYGVIPGIKHYGCMVDLLGRAGRL---EEAYEFIVGLPIRPTPILWRTLLSACGSHG 405
Query: 328 GVEIAQKIVEQ 338
VE+ ++++EQ
Sbjct: 406 NVELGKRVIEQ 416
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 137/335 (40%), Gaps = 60/335 (17%)
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS---KAGNIN 464
P +N + LS+ SL KQ+ A A+++ S LSV I S ++
Sbjct: 13 PPNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQ 72
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
A +F+ I + + V + +M A+ A LF ++L G+ PD T+ +L AC
Sbjct: 73 HAHHLFDQIP-QPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKAC 131
Query: 525 THGGLVEQGQRYY-------------------------NMMKNVHKI-----KPTPSHFA 554
+E+G++ + N M ++ +P +
Sbjct: 132 ASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYN 191
Query: 555 SMVDLLGRAGLLQEAYNFIENMP---LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI 611
+M+ R EA + + L+P V S+LS+C + LDLGK E +
Sbjct: 192 AMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHE---YV 248
Query: 612 EPDNSGAY----SALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
+ + + +AL ++Y+ CG +DA + ++M V+ TQ +S + + +H G+
Sbjct: 249 KKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENM---AVRDTQAWSAMIMAYAIHGHGL 305
Query: 668 EDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
K ++ E+++ G PD + L
Sbjct: 306 -------------KAVSLFKEMRKAGTEPDEITFL 327
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 33/213 (15%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + K G + V + +L++ YAK S+ A VF+ M V+ +W+ ++ AYA
Sbjct: 240 LGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYA 299
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G A+ +F EM + P + T
Sbjct: 300 IH-------------------------------GHGLKAVSLFKEMRKAGTEPDEITFLG 328
Query: 151 VLASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
+L +C+ G + G + + K G+ + ++++ + G A G+ ++
Sbjct: 329 LLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIR 388
Query: 210 NVSS-WNVVVSLHIHSGRLDLARAQFDQMIERD 241
W ++S G ++L + +Q+ E D
Sbjct: 389 PTPILWRTLLSACGSHGNVELGKRVIEQIFELD 421
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 373/642 (58%), Gaps = 5/642 (0%)
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
+ N +++ Y + ++ A+ +FDEMP + SW+ ++S K GR++ + F P ++
Sbjct: 89 VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQN 148
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
VSWT I + G A+++F +++ V P T TSV+ +C LGD G +
Sbjct: 149 VVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILG 208
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
VVK G ++V+NSL+ + ++G+ +A+ VFD M ++V SW ++ ++ +G L
Sbjct: 209 LVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLRE 268
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD+M ER+ ++W++MIA YSQ+GY EAL +F+ M+++ KP+ A TLSA A
Sbjct: 269 ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEG-FKPNISCFACTLSALA 327
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+L L G IH ++ + D +G++LI Y K G + + + + I NV+ +
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL--ILEKNVVCW 385
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
+++ GY G + +F+ + +++ V+W ++ GY +N + +E+F +++ G
Sbjct: 386 NSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQT 445
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
PN T S++L +S+ASLD G +H ++ G + V AL MY+K G+I ++++V
Sbjct: 446 PNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQV 505
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGG 528
F + + E +SWT MI LA+ G E++ LFE M + P+ + + VL AC+H G
Sbjct: 506 FERMPEKNE-ISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCG 564
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
LV++G Y+N M+ V+ IKP H+ +VDLL R+G L EA FI +P +P+ AW +L
Sbjct: 565 LVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAAL 624
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LS C+ +K+ + + A+KL + +NS Y L N+Y+S G+W D +NIRK M+ G+K
Sbjct: 625 LSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLK 684
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
K+ G SWV+++N+VH F ED H Q + IY + + E+K
Sbjct: 685 KSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 173/373 (46%), Gaps = 69/373 (18%)
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRT------------------------------EF 309
T S L +N + G +HA++I+T EF
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 310 DATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
D + V N +IS Y + G + A+ + ++ + N ++++ L+ G +K G + +
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDE--MPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+ ++VV+WTA + G+ +NGLN +A++LF ++ G +PN+ T ++++ L
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF------NLIHW------- 475
G I +++G LSVSN+LIT+ + G I+ ARRVF +++ W
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 476 -----------------RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ +SW++MI +Q G EEA++LF +M++ G KP+ +
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENM 576
L+A + G N+ +V KI F +S++DL + G + + ++
Sbjct: 321 CTLSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDL 376
Query: 577 PLEPDVVAWGSLL 589
LE +VV W S++
Sbjct: 377 ILEKNVVCWNSMV 389
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/616 (37%), Positives = 356/616 (57%), Gaps = 40/616 (6%)
Query: 208 LKNVSSWNVVVSLHIHSGRL----DLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
+ N+SS +++ + I S L + + A F+ +++ T+N++I G + N + F A+
Sbjct: 106 IHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIF 165
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
F ML+ S +KPD+ T L + A L +LG IH I+R + V +L+ Y
Sbjct: 166 HFRLMLR-SGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMY 224
Query: 324 AKVGGVEIAQKIVEQS------GISYL--NV--------------------------IAF 349
KV + A K+ ++S G S L NV +++
Sbjct: 225 VKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSW 284
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
+TL+DG+ K GD+ A +FD + +++VV+WT M+ G+ +NG ++ A+ +F M+ EG +
Sbjct: 285 STLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVR 344
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
PN +T+ + LS + + L+ G +IH +G + ++ AL+ MY+K GNI +A V
Sbjct: 345 PNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEV 404
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F ++ +WT MI A HG E+AI F++M+ GIKPD + ++ +LTAC H G
Sbjct: 405 FGETE-QKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQ 463
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
V+ G +++ M+ + I+P+ H+ +VD+LGR+G L+EA FIE MP+ PD V WG+L
Sbjct: 464 VDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALF 523
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
ACR HK + K A KLL +EP ++G Y L N Y++ G+WEDA +R M+ GV K
Sbjct: 524 CACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHK 583
Query: 650 TQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV 709
G+S ++++ +VH F D H AI K+ +I + G++P T VLH++E++
Sbjct: 584 NSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEE 643
Query: 710 KEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDAT 769
KE +L H EKLA+AF LI T T+RI+KNL+VC DCHS +K+ K+ REI++RD
Sbjct: 644 KEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMK 703
Query: 770 RFHHFKKGLCSCRDYW 785
RFHHFK G CSCRD+W
Sbjct: 704 RFHHFKDGSCSCRDHW 719
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 237/580 (40%), Gaps = 111/580 (19%)
Query: 6 PPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESIS 65
PP+ +P E AH + S+ +HA+II L S + L++ + +SI+
Sbjct: 75 PPT--TPTE--AHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSIN 130
Query: 66 YAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
++ VF+ K L ++N ++ +T N
Sbjct: 131 HSLAVFNHHKPKNLFTFNALIRG-----------------------------LTTNS--H 159
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
F NAI F M++ + P + T VL S L G +H +++ G+ V S
Sbjct: 160 FFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVS 219
Query: 186 LLNMYAKVG---------DE-------------------------MMAKAV--FDGMRLK 209
L++MY KV DE M KAV F M K
Sbjct: 220 LVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKK 279
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
SW+ ++ +G +D A FDQM E++VV+W +M+ G+S+NG +AL MF+ ML
Sbjct: 280 ENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKML 339
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
++ ++P+ FT+ S LSACA + L+ G +IH YI T +G AL+ YAK G +
Sbjct: 340 EE-GVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNI 398
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E A +F + + WT M+ G+
Sbjct: 399 E---------------------------------SASEVFGETEQKSIRTWTVMIWGWAI 425
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA-LRSGEASSLS 448
+G ++ A+ F+ M+ G KP+ A+L+ +D G S L S+
Sbjct: 426 HGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMK 485
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
++ M ++G + A R + + V W ++ A H + A ++L+L
Sbjct: 486 HYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKL 545
Query: 509 GIKPDHI-TYVGVLTACTHGGLVEQGQRYYNMMKN--VHK 545
+P H Y+ + A G E +R +M+N VHK
Sbjct: 546 --EPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHK 583
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/644 (36%), Positives = 361/644 (56%), Gaps = 70/644 (10%)
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ +L C+ L GK+VH V K G V NS+++MY+K G M+ +A
Sbjct: 7 LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCG--MVGEA------ 58
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
AR F+ + R+V++WN+MIAGY+ EAL +F
Sbjct: 59 ----------------------ARV-FNTLPVRNVISWNAMIAGYTNERNGEEALNLFRE 95
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M + + PD +T +S+L AC+ + G QIHA +IR F
Sbjct: 96 MREKGEV-PDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFP----------------- 137
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+ QS ++ L+D Y+K + AR++FD + ++ V++W+ +++GY
Sbjct: 138 -------YLAQSAVA-------GALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGY 183
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-S 446
Q K+A++LFR + + + + LS+++ V + A L+ GKQ+HA ++
Sbjct: 184 AQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLE 243
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+SV+N+++ MY K G A +F + R VSWT MI +HG+G +A++LF M
Sbjct: 244 MSVANSVLDMYMKCGLTVEADALFREMLERN-VVSWTVMITGYGKHGIGNKAVELFNEMQ 302
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
E GI+PD +TY+ VL+AC+H GL+++G++Y++++ + KIKP H+A MVDLLGR G L
Sbjct: 303 ENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRL 362
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+EA N IE MPL+P+V W +LLS CR+H ++++GK E LL E +N Y + N+Y
Sbjct: 363 KEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMY 422
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ G W+++ IR+++K G+KK G SWV++ ++H+F D +HP + I+ + ++
Sbjct: 423 AHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEME 482
Query: 687 DEIK-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI----STPENTTLRIMKN 741
+K EMG+V LHDVEE+ K + LR HSEKLAI L+ +RI KN
Sbjct: 483 KRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKN 542
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+ IK + K++ VVRDA RFH F+ GLCSC DYW
Sbjct: 543 LRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 204/464 (43%), Gaps = 72/464 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++ Y+K G + A VFN +P R+ +SW +I Y + A+ +F EM + +
Sbjct: 43 NSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEV 102
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN--VTNSLLNMYAKVGDEMMAK 200
P +T +S L +C+ G ++H+ +++ G V +L+++Y K A+
Sbjct: 103 PDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEAR 162
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
VFD ++ E+ V++W+++I GY+Q E
Sbjct: 163 KVFD-------------------------------RIEEKSVMSWSTLILGYAQEDNLKE 191
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ +F L++S + D F L+S + A+ L+ GKQ+HAY I+ P G
Sbjct: 192 AMDLFRE-LRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKV------PYG---- 240
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAW 380
L + ++LD Y+K G A +F + +R+VV+W
Sbjct: 241 ----------------------LLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSW 278
Query: 381 TAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR 440
T M+ GY ++G+ AVELF M G +P++ T A+LS S + GK+ + S L
Sbjct: 279 TVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKK-YFSILC 337
Query: 441 SGEASSLSVSN--ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEA 498
S + V + ++ + + G + A+ + + + W +++ HG E
Sbjct: 338 SNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMG 397
Query: 499 IQLFERMLEL-GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
Q+ E +L G P YV V H G ++ ++ +K
Sbjct: 398 KQVGEILLRREGNNP--ANYVMVSNMYAHAGYWKESEKIRETLK 439
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 32 GKLVHARIIKC--GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
GK +HA IK GL L + + NS+++ Y K A +F EM + + SW +++ Y
Sbjct: 227 GKQMHAYTIKVPYGL-LEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGY 285
Query: 90 AKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
K G + A E+FN M DSV++ ++ + G K + F + +Q + +
Sbjct: 286 GKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPK 345
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
+ + LG K+ + + K L V + +LL++ GD M K V +
Sbjct: 346 VEHYACMVDL--LGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEI 403
Query: 206 MRLK---NVSSWNVVVSLHIHSG 225
+ + N +++ +V +++ H+G
Sbjct: 404 LLRREGNNPANYVMVSNMYAHAG 426
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/785 (31%), Positives = 415/785 (52%), Gaps = 112/785 (14%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FY +LQ + + + +HA I+K G H FL L+N YAK
Sbjct: 71 FYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKC------------- 117
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
G ++ A +VF+ +P R+ VSWTT++ Y + + A+++F
Sbjct: 118 ------------------GTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFR 159
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM++ PT +T+ + L++ + L GK++H + +K + ++ NSL ++Y+K G
Sbjct: 160 EMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCG 219
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
L+ A F ++ +++V++W ++I+ +
Sbjct: 220 S-------------------------------LECAVKAFRRIRDKNVISWTTVISAWGD 248
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG L F ML + ++P++FTL S LS C ++ L +G QIH+ I+ F++ P
Sbjct: 249 NGEAATGLQFFVEMLSEC-VEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLP 307
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
+ N+++ YL Y+K G I A+++FD +
Sbjct: 308 IKNSIM----------------------YL-----------YLKCGWIHEAKKLFDEMET 334
Query: 375 RDVVAWTAMLVGYEQ-----------NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+V W AM+ G+ + + +A+ +F + R G KP+ +T S++LSV S
Sbjct: 335 ISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCS 394
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
SL +L+ G+Q+HA +++G S + V AL+ MY+K G+I A + F + R +SWT
Sbjct: 395 SLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRT-LISWT 453
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
SMI AQ+G ++A+ LFE M G++P+ IT+VGVL+AC+H G+V++ Y+ MMKN
Sbjct: 454 SMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNE 513
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
+KI P H+A ++D+ R G L EA++FI+ M LEP+ W L++ CR L+LG
Sbjct: 514 YKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFY 573
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
AAE+LL ++P ++ Y+ L N+Y S GKW++ + +RK MK + + + +SW+ I++K++
Sbjct: 574 AAEQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIY 633
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFV-PDTASVLHDVEEDVKEQMLR---HHSE 719
F H Q +Y + + ++ K G+ ++ V + E+ +E+ L +HSE
Sbjct: 634 SFKRNARSHAQSGEMYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSE 693
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGL++T +R+ K++ +C DCH+ I+ I L REI++RD+ R H F G C
Sbjct: 694 KLAIAFGLLNTSNAVPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHC 753
Query: 780 SCRDY 784
SC D+
Sbjct: 754 SCGDF 758
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
S +REG K + +L + ++IHA +++G + L+ +Y+K G
Sbjct: 59 SFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCG 118
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
+ AR+VF+ + R+ VSWT+++ E A+Q+F MLE G P + T L
Sbjct: 119 TMETARKVFDELP-RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTAL 177
Query: 522 TACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPD 581
+A + E G++ + ++I+ S S+ L + G L+ A + + +
Sbjct: 178 SASSDLHSKELGKQIHGYSIK-YRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIR-DKN 235
Query: 582 VVAWGSLLSA 591
V++W +++SA
Sbjct: 236 VISWTTVISA 245
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 317/547 (57%), Gaps = 33/547 (6%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
D +N++I ++Q + F N ++ ++ P+KFT L ACA + +L+LG +
Sbjct: 190 DAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAV 249
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
HA +++ F+ V N L+ Y + G
Sbjct: 250 HASMVKFGFEEDPHVRNTLVHMYCCC------------------------------CQDG 279
Query: 361 DIGP--ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAM 418
GP A+++FD +D V W+AM+ GY + G + AV LFR M G P+ T+ ++
Sbjct: 280 SSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSV 339
Query: 419 LSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQE 478
LS + L +L+ GK + + R S+ + NALI M++K G+++ A +VF + R
Sbjct: 340 LSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRT- 398
Query: 479 TVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYN 538
VSWTSMIV LA HG G EA+ +F+ M+E G+ PD + ++GVL+AC+H GLV++G Y+N
Sbjct: 399 IVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFN 458
Query: 539 MMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
M+N+ I P H+ MVD+L RAG + EA F+ MP+EP+ V W S+++AC L
Sbjct: 459 TMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGEL 518
Query: 599 DLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQI 658
LG+ A++L+ EP + Y L N+Y+ +WE +R+ M G++K G + +++
Sbjct: 519 KLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEM 578
Query: 659 QNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHS 718
N+++ F D H Q IY + ++ EIK G+VP T+ VL D++E+ KE L HS
Sbjct: 579 NNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHS 638
Query: 719 EKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGL 778
EKLAIAF L+STP T +RI+KNLRVC DCHSA KFI K+ +REIVVRD RFHHFK GL
Sbjct: 639 EKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGL 698
Query: 779 CSCRDYW 785
CSC D+W
Sbjct: 699 CSCGDFW 705
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 178/405 (43%), Gaps = 66/405 (16%)
Query: 106 PNRDSVSWTTIIVTYNEIGRFK-NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAG 164
P+ D+ + T+I + + K +A+R + M + V P +FT VL +C + L G
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
VH+ +VK G +V N+L++MY DG S
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYCCCCQ--------DG-----------------SS 281
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
G + A+ FD+ +D VTW++MI GY++ G A+ +F M + + + PD+ T+ S
Sbjct: 282 GPVS-AKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREM-QVTGVCPDEITMVSV 339
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
LSACA+L L+LGK + +YI R + + NALI +AK
Sbjct: 340 LSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKC------------------ 381
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
GD+ A ++F ++ R +V+WT+M+VG +G +AV +F M+
Sbjct: 382 ---------------GDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMM 426
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSNALITMYSKAGNI 463
+G P++ +LS S +D G + + ++ M S+AG +
Sbjct: 427 EQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRV 486
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEE-AIQLFER 504
N A + V W S++ A G LGE A +L R
Sbjct: 487 NEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRR 531
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 77/367 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYA-----KTESISYAKKVFDEMPVKTLCSWNTI 85
+G VHA ++K G ++N+L++ Y + AKKVFDE PVK
Sbjct: 245 LGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVK-------- 296
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
DSV+W+ +I Y G A+ +F EM V P +
Sbjct: 297 -----------------------DSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDE 333
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
T+ SVL++C LG L GK + S++ + + V + N+L++M+AK GD A VF
Sbjct: 334 ITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFRE 393
Query: 206 MRLKNVSSW-NVVVSLHIHSGRLDLARAQFDQMIER----DVVTWNSMIAGYSQNG---- 256
M+++ + SW +++V L +H GR A FD+M+E+ D V + +++ S +G
Sbjct: 394 MKVRTIVSWTSMIVGLAMH-GRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDK 452
Query: 257 --YDF-------------EALGMFANMLKDSS-------------LKPDKFTLASTLSAC 288
Y F E G +ML + ++P++ S ++AC
Sbjct: 453 GHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTAC 512
Query: 289 ANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS-CYAKVGGVEIAQKIVEQSGISYLNVI 347
+LKLG+ + +IR E + L+S YAK+ E K+ E + + I
Sbjct: 513 HARGELKLGESVAKELIRRE--PSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKI 570
Query: 348 AFTTLLD 354
+T+++
Sbjct: 571 PGSTMIE 577
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/685 (35%), Positives = 373/685 (54%), Gaps = 76/685 (11%)
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
N DS + +I + + G A+ +++ + PTQ T ++ SCT L G
Sbjct: 44 NGDSNNNNPLIQSLCKQGNLNQAL----QVLSQEPNPTQHTYELLILSCTRQNSLPQGID 99
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
+H ++ G + L+NMY+++
Sbjct: 100 LHRHLIHDGSDQDPFLATKLINMYSELDS------------------------------- 128
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+D AR FD+ +R + WN++ + GY E L ++ M + + D+FT L
Sbjct: 129 IDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNR-IGVPSDRFTYTYVLK 187
Query: 287 ACANLEK----LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGIS 342
AC E L G++IH +I+R F+ G V I
Sbjct: 188 ACVASEAFVSLLLNGREIHGHILRHGFE----------------GHVHI----------- 220
Query: 343 YLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRS 402
TTLLD Y + G + A R+FD + ++VV+W+AM+ Y +NG +A+ELFR
Sbjct: 221 ------MTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRK 274
Query: 403 MVREGPK--PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M+ E PN+ T+ ++L ++LA+L+ GK +H LR G S L V +AL+T+Y++
Sbjct: 275 MMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARC 334
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
GN+ RVF + R + VSW S+I + HG G +AIQ+F+ M++ G+ P I++V V
Sbjct: 335 GNLELGHRVFERMEKR-DVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSV 393
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEP 580
L AC+H GLVE+G+ + M HKI P+ H+A MVDLLGRA L EA I++M +EP
Sbjct: 394 LGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEP 453
Query: 581 DVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRK 640
WGSLL +CR+H N++L + A +L +EP N+G Y L ++Y+ W + ++
Sbjct: 454 GPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKM 513
Query: 641 SMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTAS 700
++ G++K G S ++I+ K++ F D +PQ + ++ + K+ E+KE G+VPDT
Sbjct: 514 LLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKV 573
Query: 701 VLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVD 760
VL+D++ + KE+++ HSEKLA+AFGLI++ + T+RI KNLR+C DCHS KFI K +
Sbjct: 574 VLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFAN 633
Query: 761 REIVVRDATRFHHFKKGLCSCRDYW 785
REI+VRD RFH F+ G+CSC DYW
Sbjct: 634 REILVRDVNRFHLFQDGVCSCGDYW 658
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 224/513 (43%), Gaps = 106/513 (20%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
+ PNP Y L+ S + + G +H +I G FL L+N Y++
Sbjct: 72 QEPNPTQ-----HTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSEL 126
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+SI A+KVFD+ +T+ WN + A L LA
Sbjct: 127 DSIDNARKVFDKTRKRTIYVWNALFRA------LTLA----------------------- 157
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA----LGDLSAGKKVHSFVVKTGLS 177
G + + ++ M + V +FT T VL +C A + L G+++H +++ G
Sbjct: 158 --GYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFE 215
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
G V++ +LL+MYA+ G + A VFD M +KNV SW
Sbjct: 216 GHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSW----------------------- 252
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFAN-MLKDSSLKPDKFTLASTLSACANLEKLKL 296
++MIA YS+NG EAL +F ML++ L P+ T+ S L ACA L L+
Sbjct: 253 --------SAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQ 304
Query: 297 GKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGY 356
GK +H YI+R D+ PV +AL++ YA+ G +E+
Sbjct: 305 GKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGH----------------------- 341
Query: 357 IKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLS 416
R+F+ + RDVV+W +++ Y +G + A+++F+ M+ +G P+ +
Sbjct: 342 ----------RVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFV 391
Query: 417 AMLSVSSSLASLDHGKQIHASALRSGEA-SSLSVSNALITMYSKAGNINAARRVFNLIHW 475
++L S ++ GK + S +R + S+ ++ + +A ++ A ++ + +
Sbjct: 392 SVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRI 451
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
W S++ + H E A + R+ EL
Sbjct: 452 EPGPKVWGSLLGSCRIHCNVELAERATSRLFEL 484
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/663 (34%), Positives = 359/663 (54%), Gaps = 73/663 (11%)
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
D+ K VHS V ++ L+ YA G+ +A+ VFD + +NV
Sbjct: 47 DIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNV-------- 98
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
+ +N MI Y N +AL +F +M+ PD +
Sbjct: 99 -----------------------IFYNVMIRSYMNNHLYDDALLVFRDMVS-GGFSPDHY 134
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T L AC+ + L++G Q+H + + D VGN LI+ Y K G + A+ ++++
Sbjct: 135 TYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDE- 193
Query: 340 GISYLNVIAFTTLLDGYIK-------------------------IGDIGPA--------- 365
+ +V+++ +++ GY + + + PA
Sbjct: 194 -MQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENV 252
Query: 366 ---RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVS 422
+F +L + +V+W M+ Y +N + +V+L+ M + +P+ T +++L
Sbjct: 253 LYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRAC 312
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
L++L G++IH R ++ + N+LI MY++ G + A+RVF+ + +R + SW
Sbjct: 313 GDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR-DVASW 371
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
TS+I A G G A+ LF M G PD I +V +L+AC+H GL+ +G+ Y+ M +
Sbjct: 372 TSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTD 431
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+KI P HFA +VDLLGR+G + EAYN I+ MP++P+ WG+LLS+CRV+ N+D+G
Sbjct: 432 DYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGI 491
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
+AA+KLL + P+ SG Y L N+Y+ G+W + IR MK ++K G S V++ N+V
Sbjct: 492 LAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQV 551
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
H F D HPQ IY +++ + ++KE+G+VP T S LHDVEE+ KE L HSEKLA
Sbjct: 552 HTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLA 611
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
I F +++T E + +RI KNLRVC DCH A K I K+V REIV+RD RFHHFK G+CSC
Sbjct: 612 IVFAILNTQE-SPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCG 670
Query: 783 DYW 785
DYW
Sbjct: 671 DYW 673
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 209/476 (43%), Gaps = 74/476 (15%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AYA +G LA VF+++P R+ + + +I +Y + +A+ +F +MV P
Sbjct: 73 LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPD 132
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C+ +L G ++H V K GL + V N L+ +Y K G A+ V D
Sbjct: 133 HYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLD 192
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLA---------------------------------- 230
M+ K+V SWN +V+ + + + D A
Sbjct: 193 EMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENV 252
Query: 231 ---RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
F + ++ +V+WN MI+ Y +N +++ ++ M K ++PD T AS L A
Sbjct: 253 LYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGK-CEVEPDAITCASVLRA 311
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C +L L LG++IH Y+ R + + N+LI YA+ G +E A+
Sbjct: 312 CGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAK-------------- 357
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
R+FD ++ RDV +WT+++ Y G +AV LF M G
Sbjct: 358 -------------------RVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSG 398
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA-LITMYSKAGNINAA 466
P++ A+LS S L+ GK + + + A L+ + ++G ++ A
Sbjct: 399 QSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEA 458
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLT 522
+ + + W +++ + + + I +++L+L P+ Y +L+
Sbjct: 459 YNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLA--PEESGYYVLLS 512
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 72/362 (19%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L++ S N +G +H + K GL L++F+ N L+ Y K + A+ V DEM
Sbjct: 136 YPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQ 195
Query: 76 VKTLCSWNTILSAYAKQGRLD----------------LACEVFNLMP------------- 106
K + SWN++++ YA+ + D AC + +L+P
Sbjct: 196 SKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYV 255
Query: 107 --------NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
+ VSW +I Y + ++ ++++M + +V P T SVL +C L
Sbjct: 256 EEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDL 315
Query: 159 GDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV 218
L G+++H +V + L + + NSL++MYA+ G AK VFD M+ ++V+SW
Sbjct: 316 SALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASW---- 371
Query: 219 SLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDK 278
S+I+ Y G + A+ +F M ++S PD
Sbjct: 372 ---------------------------TSLISAYGMTGQGYNAVALFTEM-QNSGQSPDS 403
Query: 279 FTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN--ALISCYAKVGGVEIAQKIV 336
+ LSAC++ L GK + + ++ T + + L+ + G V+ A I+
Sbjct: 404 IAFVAILSACSHSGLLNEGK-FYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNII 462
Query: 337 EQ 338
+Q
Sbjct: 463 KQ 464
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/652 (36%), Positives = 363/652 (55%), Gaps = 58/652 (8%)
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGL-----------SGCVNVTNSLLNMYAKVG 194
+ S L C+ +L K++H+ ++KTGL S C++ T+S YA++
Sbjct: 15 YETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQI- 70
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
VFDG FD+ D WN MI G+S
Sbjct: 71 -------VFDG----------------------------FDR---PDTFLWNLMIRGFSC 92
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+ +L ++ ML SS + +T S L AC+NL + QIHA I + ++
Sbjct: 93 SDEPERSLLLYQRMLC-SSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
N+LI+ YA G ++A + ++ I + +++ +++ GY+K G + A +F + +
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDR--IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
++ ++WT M+ GY Q +NK+A++LF M +P+N +L+ LS + L +L+ GK I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H+ ++ + LI MY+K G + A VF I ++ +WT++I A HG
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAYHGH 328
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G EAI F M ++GIKP+ IT+ VLTAC++ GLVE+G+ + M+ + +KPT H+
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
+VDLLGRAGLL EA FI+ MPL+P+ V WG+LL ACR+HKN++LG+ E L+ I+P
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPY 448
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
+ G Y N+++ KW+ AA R+ MK GV K G S + ++ H F D HP+
Sbjct: 449 HGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPE 508
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHD-VEEDVKEQMLRHHSEKLAIAFGLISTPEN 733
+ I +K + +++E G+VP+ +L D V++D +E ++ HSEKLAI +GLI T
Sbjct: 509 IEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPG 568
Query: 734 TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T +RIMKNLRVC DCH K I K+ R+IV+RD TRFHHF+ G CSC DYW
Sbjct: 569 TIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 226/486 (46%), Gaps = 71/486 (14%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K +HAR++K GL + + YA T+ +S+ + S ++ YA+
Sbjct: 31 KQIHARMLKTGL---------MQDSYAITKFLSFC-----------ISSTSSDFLPYAQI 70
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
VF+ D+ W +I ++ + ++ ++ M+ +T S+L
Sbjct: 71 --------VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C+ L ++H+ + K G V NSL+N YA G+ +A +FD + +
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 213 SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDS 272
SWN V+ ++ +G++D+A F +M E++ ++W +MI+GY Q + EAL +F M ++S
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNS 241
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
++PD +LA+ LSACA L L+ GK IH+Y+ +T +G LI YAK G +E
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME-- 299
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGL 392
A +F +++ + V AWTA++ GY +G
Sbjct: 300 -------------------------------EALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 393 NKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE-ASSLSVSN 451
++A+ F M + G KPN T +A+L+ S ++ GK I S R ++
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLFERMLEL 508
++ + +AG ++ A+R + + V W +++ A H LGEE ++ +
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL-----I 443
Query: 509 GIKPDH 514
I P H
Sbjct: 444 AIDPYH 449
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 173/404 (42%), Gaps = 70/404 (17%)
Query: 273 SLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA 332
SL+ + + S L C+ E+LK QIHA +++T G ++ +
Sbjct: 9 SLEHNLYETMSCLQRCSKQEELK---QIHARMLKT-------------------GLMQDS 46
Query: 333 QKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP-ARRIFDSLRDRDVVAWTAMLVGYEQNG 391
I + +L+ +T D P A+ +FD D W M+ G+ +
Sbjct: 47 YAITK-----FLSFCISST-------SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSD 94
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
+ ++ L++ M+ N YT ++L S+L++ + QIHA + G + + N
Sbjct: 95 EPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVN 154
Query: 452 ALITMYSKAGNINAARRVFNLI------HW------------------------RQETVS 481
+LI Y+ GN A +F+ I W + +S
Sbjct: 155 SLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS 214
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
WT+MI Q + +EA+QLF M ++PD+++ L+AC G +EQG+ ++ +
Sbjct: 215 WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL- 273
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLS--ACRVHKNLD 599
N +I+ ++D+ + G ++EA +N+ + V AW +L+S A H
Sbjct: 274 NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAYHGHGREA 332
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMK 643
+ K + + I+P N ++A+ S G E+ I SM+
Sbjct: 333 ISKFMEMQKMGIKP-NVITFTAVLTACSYTGLVEEGKLIFYSME 375
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 33/189 (17%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +H+ + K + + L L++ YAK + A +VF + K++ +W ++S YA
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G GR AI F+EM + + P T T+V
Sbjct: 326 HGH-----------------------------GR--EAISKFMEMQKMGIKPNVITFTAV 354
Query: 152 LASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK- 209
L +C+ G + GK + +S L + ++++ + G AK M LK
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 210 NVSSWNVVV 218
N W ++
Sbjct: 415 NAVIWGALL 423
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 347/648 (53%), Gaps = 80/648 (12%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFV--------VKTGLSGCVNVTNSLLNMYAKVGDEMM 198
++T ++ C G G+ +H V G G + V+NSL++MYAK G
Sbjct: 74 SLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFG---- 129
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ-NGY 257
+ D +RL FD+M ER+VVTW +++A + +G
Sbjct: 130 --LLDDALRL-------------------------FDRMPERNVVTWTTVVAALANADGR 162
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EAL M +D + P+ +T +S L AC L +HA ++ D+
Sbjct: 163 KEEALRFLVAMWRDG-VAPNAYTFSSVLGACGTPGVLA---ALHASTVKVGLDS------ 212
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
+V ++L+D Y+K+GD+ RR+FD + RD+
Sbjct: 213 ---------------------------DVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDL 245
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V W +++ G+ Q+G A+ELF M G N TL+++L + + L+ G+Q+HA
Sbjct: 246 VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAH 305
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
L+ L + NAL+ MY K G++ A +F+ + R + +SW++MI LAQ+G E
Sbjct: 306 VLKY--ERDLILHNALLDMYCKCGSLEDAEALFHRMPQR-DVISWSTMISGLAQNGKSAE 362
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
A+++F+ M G+ P+ IT VGVL AC+H GLVE G Y+ MK + I+P H MV
Sbjct: 363 ALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMV 422
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGRAG L EA FI +M LEPD V W +LL ACR+HK+ +L AA ++L +EPD+ G
Sbjct: 423 DLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQG 482
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
A L N Y+ +W DA K+M+ G+KK G SW++++ VHVF D HP D
Sbjct: 483 ARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDT 542
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
I ++ ++ I +G+VP T VL D+ + KE +L++HSEK+AIAFG + +R
Sbjct: 543 IVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIR 602
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
IMKNLR+C DCH+ K + K R I++RD RFHHF+ G CSC DYW
Sbjct: 603 IMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 191/411 (46%), Gaps = 82/411 (19%)
Query: 32 GKLVHARIIKCGL--HLS------VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWN 83
G+L+H + G H S +F+ NSL++ YAK + A ++FD MP + + +W
Sbjct: 91 GRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWT 150
Query: 84 TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLP 143
T+++A A N GR + A+R V M +D V P
Sbjct: 151 TVVAALA------------------------------NADGRKEEALRFLVAMWRDGVAP 180
Query: 144 TQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+T +SVL +C G L+A +H+ VK GL V V +SL++ Y K+GD + VF
Sbjct: 181 NAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVF 237
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALG 263
D M + RD+V WNS+IAG++Q+G A+
Sbjct: 238 DEM-------------------------------VTRDLVVWNSIIAGFAQSGDGVGAIE 266
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
+F M KD+ ++ TL S L AC + L+ G+Q+HA++++ E D + NAL+ Y
Sbjct: 267 LFMRM-KDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDLI--LHNALLDMY 323
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV----VA 379
K G +E A+ + + + +VI+++T++ G + G A R+FD ++ V +
Sbjct: 324 CKCGSLEDAEALFHR--MPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRIT 381
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLD 429
+L GL +D FRSM + G +P + M+ + LD
Sbjct: 382 MVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLD 432
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 65/263 (24%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
P V +HA +K GL VF+++SL++ Y K + ++VFDEM + L WN+I++
Sbjct: 194 TPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIA 253
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
+A+ G D V AI +F+ M Q T
Sbjct: 254 GFAQSG---------------DGV----------------GAIELFMRMKDAGFSANQGT 282
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+TSVL +CT + L AG++VH+ V+K + + N+LL+MY K G A+A+F M
Sbjct: 283 LTSVLRACTGMVMLEAGRQVHAHVLKYERD--LILHNALLDMYCKCGSLEDAEALFHRMP 340
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
++V SW ++MI+G +QNG EAL +F +
Sbjct: 341 QRDVISW-------------------------------STMISGLAQNGKSAEALRVF-D 368
Query: 268 MLKDSSLKPDKFTLASTLSACAN 290
++K + P++ T+ L AC++
Sbjct: 369 LMKSEGVAPNRITMVGVLFACSH 391
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/637 (35%), Positives = 360/637 (56%), Gaps = 30/637 (4%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++L SC++ DL K +H F+++T L V V + LL + V D
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALALCVDDS------------- 60
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+ H + L A F Q+ ++ +N +I +S +A G + ML
Sbjct: 61 ---------TFHKPTNLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQML 111
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K S + PD T + A +E + +G+Q H+ I+R F V N+L+ YA G +
Sbjct: 112 K-SRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLI 170
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
A +I Q + + +V+++T+++ GY K G + AR +FD + R++ W+ M+ GY +
Sbjct: 171 AAAGRIFGQ--MPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAK 228
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N + A++LF M REG N + +++S + L +L+ G++ H ++S +L +
Sbjct: 229 NNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLIL 288
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
AL+ MY + G I A RVF + ++++SW+S+I LA HG +AI F +M+ LG
Sbjct: 289 GTALVDMYWRCGEIEKAIRVFEELP-DKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLG 347
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
P IT VL+AC+HGGLV++G Y MK + I+P H+ +VD+LGRAG L EA
Sbjct: 348 FSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEA 407
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
NFI MP++P+ G+LL AC+++KN ++ + L+ ++P++SG Y L N+Y+
Sbjct: 408 ENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACA 467
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV-EDWLHPQRDAIYNKMAKIWDE 688
G+WE ++R MK VKK G+S ++I K++ F + +D HP+ I +I +
Sbjct: 468 GQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGK 527
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
I+ +G+ +T DV+E+ KE + HSEKLAIA+G++ T TT+RI+KNLRVC DC
Sbjct: 528 IRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDC 587
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+A K I ++ RE +VRD RFHHF+ GLCSCRDYW
Sbjct: 588 HTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 214/458 (46%), Gaps = 42/458 (9%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
L A +F+ + N + + +I ++ A + +M++ ++ P T ++ +
Sbjct: 69 LGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 128
Query: 155 CTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSW 214
T + + G++ HS +V+ G V V NSL++MYA G A +F M ++V SW
Sbjct: 129 STEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSW 188
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
+V+ + G ++ AR FD+M R++ TW+ MI GY++N +A+ +F ++K +
Sbjct: 189 TSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF-ELMKREGV 247
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
++ + S +S+CA+L L+ G++ H Y++++ +G AL+ Y + G +E
Sbjct: 248 VANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIE---- 303
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
A R+F+ L D+D ++W++++ G +G
Sbjct: 304 -----------------------------KAIRVFEELPDKDSLSWSSIIKGLAVHGHAH 334
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNAL 453
A+ F MVR G P + TL+A+LS S +D G +I+ + R G L +
Sbjct: 335 KAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCI 394
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ M +AG + A + + +++ A + E A ++ ++E +KP+
Sbjct: 395 VDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIE--VKPE 452
Query: 514 HITYVGVLT---ACTHGGLVEQGQRYYNMMKNVHKIKP 548
H Y +L+ AC G E+ + ++MK KP
Sbjct: 453 HSGYYVLLSNIYAC--AGQWEKLESLRDIMKEKLVKKP 488
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 175/342 (51%), Gaps = 26/342 (7%)
Query: 15 FYAHLLQSNLKSRN---PF------------VGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
FY +L+S + N PF VG+ H++I++ G V+++NSL++ YA
Sbjct: 106 FYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYA 165
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
I+ A ++F +MP + + SW ++++ Y K G ++ A E+F+ MP+R+ +W+ +I
Sbjct: 166 NCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMING 225
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y + F+ AI +F M ++ V+ + + SV++SC LG L G++ H +VVK+ ++
Sbjct: 226 YAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVN 285
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVV-SLHIHSGRLDLARAQFDQMI 238
+ + +L++MY + G+ A VF+ + K+ SW+ ++ L +H G A F QM+
Sbjct: 286 LILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVH-GHAHKAIHYFSQMV 344
Query: 239 E-----RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
RD +T ++++ S G + L ++ NM +D ++P + K
Sbjct: 345 RLGFSPRD-ITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGK 403
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
L + +I++ P+ AL+ E+A+++
Sbjct: 404 L---AEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERV 442
>gi|224135801|ref|XP_002327307.1| predicted protein [Populus trichocarpa]
gi|222835677|gb|EEE74112.1| predicted protein [Populus trichocarpa]
Length = 527
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/570 (38%), Positives = 335/570 (58%), Gaps = 47/570 (8%)
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
++ G LD AR FD+M R+VV+W ++I+GY+Q+G +E +F++ML D P++F
Sbjct: 1 MYAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDMLVDC--YPNEF 58
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
AS + +C + GKQ+HA ++ A+ VGNALI+ Y+K
Sbjct: 59 AFASVIISCDYV----CGKQVHALALKMGLIASVYVGNALITRYSK-------------- 100
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
+ D ++ G A R+F+S+ R++V+W +M+ E+ A+ L
Sbjct: 101 -----------SCEDNFVGYGS--EACRVFESMEFRNLVSWNSMIAAEEE------ALLL 141
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
FR + REG P+ T S +L + + H +++ +++G ++N LI Y++
Sbjct: 142 FRQLYREGLAPDWCTFSIVLKACAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYAR 201
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G+I+ +++VF+ + R + VSW SMI A A HG +EA+ LF E+ ++PD T V
Sbjct: 202 CGSISFSKQVFDKMRSR-DVVSWNSMIKAYALHGQAKEALHLFS---EMNVRPDSATMVA 257
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLE 579
+L+AC+H GLVE+G ++ M H + P H+A MVD+LGRAGLL EA I MP++
Sbjct: 258 LLSACSHAGLVEEGINIFDSMSMNHGVSPQLDHYACMVDILGRAGLLLEAGELISRMPMK 317
Query: 580 PDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIR 639
PD V W +LLS+CR + L K+AA+KL +EP NS Y + N+Y S G + +A IR
Sbjct: 318 PDSVVWSALLSSCRKYGETQLAKLAADKLKELEPGNSLGYVQISNIYCSGGSYNEAGLIR 377
Query: 640 KSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTA 699
M V+K G SW++I+N+VH F HPQR+AIY K+ + ++K +G+VP+T+
Sbjct: 378 DEMNGSRVRKEPGLSWIEIENRVHEFASGGRRHPQREAIYAKLYSLIGQLKGVGYVPETS 437
Query: 700 SVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE----NTTLRIMKNLRVCNDCHSAIKFI 755
L D+EE+ K++ L HHSEKLA+ F L+S +RI+KN+R+C DCH+ +K
Sbjct: 438 LALQDIEEEHKQEQLYHHSEKLALVFALMSEGSLCCGGGVIRIVKNIRICVDCHNFMKLA 497
Query: 756 CKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
L+ +EIVVRD+ RFHHFK +CSC DYW
Sbjct: 498 SDLLQKEIVVRDSNRFHHFKNRMCSCNDYW 527
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 203/454 (44%), Gaps = 90/454 (19%)
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
YAK G LD A +VF+ M R+ VSWT +I Y + GR +F +M+ D P +F
Sbjct: 2 YAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDMLVD-CYPNEFAF 60
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAK------VGDEMMAKAV 202
SV+ SC D GK+VH+ +K GL V V N+L+ Y+K VG A V
Sbjct: 61 ASVIISC----DYVCGKQVHALALKMGLIASVYVGNALITRYSKSCEDNFVGYGSEACRV 116
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M +N +V+WNSMIA + EAL
Sbjct: 117 FESMEFRN-------------------------------LVSWNSMIAA------EEEAL 139
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F + ++ L PD T + L ACA + +++ +++ F+ + N LI
Sbjct: 140 LLFRQLYRE-GLAPDWCTFSIVLKACAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHA 198
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YA+ G + ++++FD +R RDVV+W +
Sbjct: 199 YARCGSISF---------------------------------SKQVFDKMRSRDVVSWNS 225
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRS 441
M+ Y +G K+A+ LF M +P++ T+ A+LS S ++ G I S ++
Sbjct: 226 MIKAYALHGQAKEALHLFSEM---NVRPDSATMVALLSACSHAGLVEEGINIFDSMSMNH 282
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + L ++ + +AG + A + + + + ++V W++++ + ++G + A
Sbjct: 283 GVSPQLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKLA 342
Query: 502 FERMLELGIKP-DHITYVGVLTA-CTHGGLVEQG 533
+++ EL +P + + YV + C+ G E G
Sbjct: 343 ADKLKEL--EPGNSLGYVQISNIYCSGGSYNEAG 374
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 66/269 (24%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +K GL SV++ N+L+ Y+K+ C N + Y
Sbjct: 72 GKQVHALALKMGLIASVYVGNALITRYSKS------------------CEDNFV--GYGS 111
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ AC VF M R+ VSW ++I E A+ +F ++ ++ + P T + V
Sbjct: 112 E-----ACRVFESMEFRNLVSWNSMIAAEEE------ALLLFRQLYREGLAPDWCTFSIV 160
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C V+S VVK G + N+L++ YA+ G +K VFD MR ++V
Sbjct: 161 LKACAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDV 220
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SW NSMI Y+ +G EAL +F+ M
Sbjct: 221 VSW-------------------------------NSMIKAYALHGQAKEALHLFSEM--- 246
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQI 300
+++PD T+ + LSAC++ ++ G I
Sbjct: 247 -NVRPDSATMVALLSACSHAGLVEEGINI 274
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
V+++++K G L N+L++ YA+ SIS++K+VFD+M + + SWN+++ AYA G+
Sbjct: 176 VYSQVVKAGFEDDRVLANTLIHAYARCGSISFSKQVFDKMRSRDVVSWNSMIKAYALHGQ 235
Query: 95 LDLACEVFNLMPNR-DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF----TVT 149
A +F+ M R DS + ++ + G + I +F M + + Q +
Sbjct: 236 AKEALHLFSEMNVRPDSATMVALLSACSHAGLVEEGINIFDSMSMNHGVSPQLDHYACMV 295
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+L L L AG+ + +K V ++LL+ K G+ +AK D ++
Sbjct: 296 DILGRAGLL--LEAGELISRMPMKPDSV----VWSALLSSCRKYGETQLAKLAADKLK 347
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/717 (33%), Positives = 381/717 (53%), Gaps = 107/717 (14%)
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + N ++ + KQG L A E+ +L PN
Sbjct: 35 PTASTADNNKLIQSLCKQGNLTQALELLSLEPN--------------------------- 67
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
P Q T ++ SCT L ++VH +++ G + L+NMY+
Sbjct: 68 --------PAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYS--- 116
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
FD +D AR FD+ R + +N++ S
Sbjct: 117 -------FFDS---------------------IDNARKVFDKTRNRTIYVYNALFRALSL 148
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE----KLKLGKQIHAYIIRTEFD 310
G+ E L M+ M + D+FT L AC E L G++IHA+I+R +D
Sbjct: 149 AGHGEEVLNMYRRM-NSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYD 207
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
Y++++ TTL+D Y K G + A +F+
Sbjct: 208 G-------------------------------YVHIM--TTLVDMYAKFGCVSNASCVFN 234
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK--PNNYTLSAMLSVSSSLASL 428
+ ++VV+W+AM+ Y +NG +A+ELFR ++ E PN+ T+ ++L ++LA+L
Sbjct: 235 QMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAAL 294
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
+ G+ IH LR G S L V +AL+TMY++ G + +RVF+ + +++ VSW S+I +
Sbjct: 295 EQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMD-KRDVVSWNSLISS 353
Query: 489 LAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP 548
HG G++AI +FE M G++P I++V VL AC+H GLV++G+ +N M H I P
Sbjct: 354 YGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICP 413
Query: 549 TPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
+ H+A MVDLLGRA L+EA IENM +EP WGSLL +CR+H N++L + A+ +L
Sbjct: 414 SVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRL 473
Query: 609 LLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVE 668
+EP N+G Y L ++Y+ G W+ ++K ++ G++K G SW++++ K++ F
Sbjct: 474 FDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSV 533
Query: 669 DWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLI 728
D ++P+ + ++ + K+ E+KE G+VP T VL+D++ KE+++ HSEKLA+AFGLI
Sbjct: 534 DEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLI 593
Query: 729 STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++ + +RI K+LR+C DCHS KFI K ++EI+VRD RFHHF+ G+CSC DYW
Sbjct: 594 NSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 221/511 (43%), Gaps = 112/511 (21%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
PNP Y L+ S + + VH +++ G FL L+N Y+ +S
Sbjct: 66 PNPAQ-----HTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDS 120
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I A+KVFD+ +T+ +N + A + G + EV N+ +S+
Sbjct: 121 IDNARKVFDKTRNRTIYVYNALFRALSLAGHGE---EVLNMYRRMNSIG----------- 166
Query: 124 GRFKNAIRMFVEMVQDQVLPT-QFTVTSVLASCTA----LGDLSAGKKVHSFVVKTGLSG 178
+P+ +FT T VL +C A + L+ G+++H+ +++ G G
Sbjct: 167 ------------------IPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDG 208
Query: 179 CVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMI 238
V++ +L++MYAK G A VF+ M +KNV SW
Sbjct: 209 YVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSW------------------------ 244
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFAN-MLKDSSLKPDKFTLASTLSACANLEKLKLG 297
++MIA Y++NG FEAL +F ML+ L P+ T+ S L ACA L L+ G
Sbjct: 245 -------SAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQG 297
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
+ IH YI+R D+ PV +AL++ YA+ G +E+ Q
Sbjct: 298 RLIHGYILRKGLDSILPVISALVTMYARCGKLELGQ------------------------ 333
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
R+FD + RDVV+W +++ Y +G K A+ +F M G +P+ + +
Sbjct: 334 ---------RVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVS 384
Query: 418 MLSVSSSLASLDHGKQIHASA-LRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L S +D GK + S + G S+ ++ + +A + A ++ +
Sbjct: 385 VLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIE 444
Query: 477 QETVSWTSMIVALAQH---GLGEEA-IQLFE 503
W S++ + H L E A I+LF+
Sbjct: 445 PGPKVWGSLLGSCRIHCNVELAERASIRLFD 475
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/636 (35%), Positives = 357/636 (56%), Gaps = 42/636 (6%)
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
+N AK ++ +K + D N S ++ + G R FD++ +++VV +N
Sbjct: 47 VNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFN 106
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIR 306
MI Y NG +AL +F M + PD +T L AC+ L +G QIH +++
Sbjct: 107 VMIRSYVNNGLYQDALLVFKTM-ANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVK 165
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIK-------- 358
D +GN L+S Y K ++ A++++++ + +++++ +++ GY +
Sbjct: 166 LGLDMNLYIGNGLVSMYGKCKWLDAARRVLDE--MPGRDMVSWNSMVAGYAQNGRFNDAL 223
Query: 359 -----------------IGDIGPA------------RRIFDSLRDRDVVAWTAMLVGYEQ 389
+G + PA + +F L+++ +++W M+ Y
Sbjct: 224 KLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVN 283
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N + +AV+L+ M G +P+ ++S++L L++ G++IH R +L +
Sbjct: 284 NAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLL 343
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI MY+K G + AR VF+ + +R + VSWTSMI A G G++A+ LF++M + G
Sbjct: 344 ENALIDMYAKCGCLKEARAVFDQMMFR-DVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
PD I +V VL AC+H GLV++G+ +N+M + I P H+ MVDLLGRAG + EA
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEA 461
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y+ MP+EP+ WGSLLSACRV+ ++++ +AA+ L + P+ SG Y L N+Y+
Sbjct: 462 YHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKA 521
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+W+D +R M G+KK G S V+I + V+ F D H Q IY + + +
Sbjct: 522 GRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRM 581
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
KE+G++P+T S LHDVEE+ KE L HSEKLAI F +++T +T+RI KN+RVC DCH
Sbjct: 582 KELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCH 641
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K I K+ +REI++RD RFHHF+ G+CSC DYW
Sbjct: 642 VATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 192/441 (43%), Gaps = 71/441 (16%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++ AYA G +F+ + +++ V + +I +Y G +++A+ +F M P
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+T VL +C+ G+L G ++H VVK GL + + N L++MY K A+ V D
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLA---------------------------------- 230
M +++ SWN +V+ + +GR + A
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV 256
Query: 231 ---RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSA 287
+ F ++ E+ +++WN MIA Y N EA+ ++ M + ++PD +++S L A
Sbjct: 257 LYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQM-QVHGVEPDAVSISSVLPA 315
Query: 288 CANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
C +L LG++IH Y+ R + + NALI YAK G ++ A+ +
Sbjct: 316 CGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAV------------ 363
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
FD + RDVV+WT+M+ Y +G KDAV LF+ M G
Sbjct: 364 ---------------------FDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
P+ ++L+ S +D G+ G + N ++ + +AG I+ A
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAY 462
Query: 468 RVFNLIHWRQETVSWTSMIVA 488
+ + W S++ A
Sbjct: 463 HLTRQMPMEPNERVWGSLLSA 483
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 79/365 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y +L++ S N +VG +H ++K GL +++++ N L++ Y K + + A++V DEMP
Sbjct: 140 YPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMP 199
Query: 76 VKTLCSWNTILSAYAKQGRLDLAC------------------------------------ 99
+ + SWN++++ YA+ GR + A
Sbjct: 200 GRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYV 259
Query: 100 -EVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTAL 158
++F + + +SW +I Y A+ ++++M V P +++SVL +C
Sbjct: 260 KDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPAC--- 316
Query: 159 GDLSA---GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWN 215
GDLSA G+++H +V + L + + N+L++MYAK G A+AVFD M ++V SW
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSW- 375
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
SMI+ Y +G +A+ +F M +DS
Sbjct: 376 ------------------------------TSMISAYGMSGQGKDAVALFKKM-RDSGFT 404
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG--NALISCYAKVGGVEIAQ 333
PD S L+AC++ + G+ + + + E+ T + N ++ + G ++ A
Sbjct: 405 PDWIAFVSVLAACSHAGLVDEGR--YCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAY 462
Query: 334 KIVEQ 338
+ Q
Sbjct: 463 HLTRQ 467
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/687 (33%), Positives = 388/687 (56%), Gaps = 16/687 (2%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHA-----------RIIKCGLHLSVFLKNSLMNFYAKTES 63
+AHL+++ S+ KL+ +I+K + + N +++ Y + +
Sbjct: 43 LHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGN 102
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ +FDEMP + SW+ ++S K GR++ + F P ++ VSWT I +
Sbjct: 103 LVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G A+++F +++ V P T TSV+ +C LGD G + VVK G ++V+
Sbjct: 163 GLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVS 222
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
NSL+ + ++G+ +A+ VFD M ++V SW ++ ++ +G L AR FD+M ER+ +
Sbjct: 223 NSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEI 282
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W++MIA YSQ+GY EAL +F+ M+++ KP+ A TLSA A+L L G IH +
Sbjct: 283 SWSAMIARYSQSGYAEEALKLFSKMVQEG-FKPNISCFACTLSALASLRALSAGINIHGH 341
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ + D +G++LI Y K G + + + + I NV+ + +++ GY G +
Sbjct: 342 VTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL--ILEKNVVCWNSMVGGYSINGRLE 399
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+F+ + +++ +W +J GY +N + +E+F +++ G PN T S++L +
Sbjct: 400 EXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACA 459
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
S+ASLD G +H ++ G + V AL MY+K G+I ++++VF + + E +SWT
Sbjct: 460 SIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNE-ISWT 518
Query: 484 SMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
MI LA+ G E++ LFE M + P+ + + VL AC+H GLV++G Y+N M+
Sbjct: 519 VMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEK 578
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
V+ IKP H+ +VDLL R+G L EA FI +P +P+ AW +LLS C+ +K+ + +
Sbjct: 579 VYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAE 638
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
A+KL + +NS Y L N+Y+S G+W D +NIRK M+ G+KK+ G SWV+++N+V
Sbjct: 639 RTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQV 698
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEI 689
H F ED H Q D IY + + E+
Sbjct: 699 HSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 69/379 (18%)
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRT------------------------------EF 309
T S L +N + G +HA++I+T EF
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 310 DATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
D + V N +IS Y + G + A+ + ++ + N ++++ L+ G +K G + +
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDE--MPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+ ++VV+WTA + G+ +NGLN +A++LF ++ G +PN+ T ++++ L
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF------NLIHW------- 475
G I +++G LSVSN+LIT+ + G I+ ARRVF +++ W
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 476 -----------------RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ +SW++MI +Q G EEA++LF +M++ G KP+ +
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENM 576
L+A + G N+ +V KI F +S++DL + G + + ++
Sbjct: 321 CTLSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDL 376
Query: 577 PLEPDVVAWGSLLSACRVH 595
LE +VV W S++ ++
Sbjct: 377 ILEKNVVCWNSMVGGYSIN 395
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/649 (34%), Positives = 364/649 (56%), Gaps = 67/649 (10%)
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+++ + Q S+L+ CT+L +L K++ ++ +KT L ++V L+N
Sbjct: 22 KNEFVINQLHPLSLLSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINF-------- 70
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+L+ + +D A FDQ++++D++ +N M GY+++
Sbjct: 71 --------------------CTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNS 110
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+ A +F +L S L PD +T +S L ACA+ + L+ G +H + ++
Sbjct: 111 PYLAFSLFGELLC-SGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKL---------- 159
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
G+++ N+ TL++ Y + D+ AR +FD + +
Sbjct: 160 ----------------------GLNH-NIYICPTLINMYAECNDMNAARGVFDEMEQPCI 196
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V++ A++ GY ++ +A+ LFR + +P + T+ +++ + L +LD GK IH
Sbjct: 197 VSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEY 256
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ G + V+ ALI M++K G++ A +F + R +T +W++MIVA A HG G +
Sbjct: 257 VKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVR-DTQAWSAMIVAFATHGDGLK 315
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
AI +FE M G++PD IT++G+L AC+H GLVEQG+ Y+ M + I P H+ MV
Sbjct: 316 AISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMV 375
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
DLLGRAG L EAYNF++ + ++ + W +LLSAC H N+++ K E++ ++ + G
Sbjct: 376 DLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGG 435
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
Y L NLY+ G+WED ++RK MK GV K G S V++ N VH F D +H
Sbjct: 436 DYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVE 495
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLH-DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
+ + ++ EIK +G+VPDT+ V H D+EE+ KE +LR+HSEKLA+AFGL++TP TT+
Sbjct: 496 LRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTI 555
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
R+ KNLR+C DCH+A K I + R+IV+RD RFH F+ G CSC D+W
Sbjct: 556 RVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 211/512 (41%), Gaps = 107/512 (20%)
Query: 6 PPSLISPLEFYAHLLQ-----SNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAK 60
P S S EF + L S S N K + A IK L + + L+NF
Sbjct: 16 PSSAFSKNEFVINQLHPLSLLSKCTSLNEL--KQIQAYTIKTNLQSDISVLTKLINFCTL 73
Query: 61 TESISY---AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
+ SY A +FD++ K + +N + YA+ LA
Sbjct: 74 NPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLA------------------- 114
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+F E++ +LP +T +S+L +C + L G +H F VK GL+
Sbjct: 115 ------------FSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLN 162
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
+ + +L+NMYA+ D A+ VFD M + S+N +
Sbjct: 163 HNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAI-------------------- 202
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
I GY+++ EAL +F L+ S+++P T+ S + +CA L L LG
Sbjct: 203 -----------ITGYARSSQPNEALSLFRE-LQASNIEPTDVTMLSVIMSCALLGALDLG 250
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
K IH Y+ + FD V ALI +AK G +L D
Sbjct: 251 KWIHEYVKKKGFDKYVKVNTALIDMFAKCG-----------------------SLTD--- 284
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
A IF+ +R RD AW+AM+V + +G A+ +F M REG +P+ T
Sbjct: 285 -------AISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLG 337
Query: 418 MLSVSSSLASLDHGKQIHASALRS-GEASSLSVSNALITMYSKAGNINAARRVFNLIHWR 476
+L S ++ G+ S ++ G + ++ + +AG+++ A + + +
Sbjct: 338 LLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIK 397
Query: 477 QETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
+ W +++ A + HG E A ++ ER+ EL
Sbjct: 398 ATPILWRTLLSACSTHGNVEMAKRVIERIFEL 429
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/631 (37%), Positives = 358/631 (56%), Gaps = 71/631 (11%)
Query: 160 DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVS 219
DL++ HS VVK+GLS TN L+N Y +RL +
Sbjct: 39 DLTSATSTHSNVVKSGLSNDTFATNHLINCY---------------LRLFTI-------- 75
Query: 220 LHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKF 279
D A+ FD+M R+VV+W S++AGY G AL +F M + + + P++F
Sbjct: 76 --------DHAQKLFDEMPHRNVVSWTSLMAGYVSQGQPNMALCLFHQM-QGTLVLPNEF 126
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
T A+ ++AC+ L L++G++IHA +VE S
Sbjct: 127 TFATLINACSILANLEIGRRIHA--------------------------------LVEVS 154
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
G+ N++A ++L+D Y K + AR IFDS+ R+VV+WT+M+ Y QN A++L
Sbjct: 155 GLGS-NLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQL 213
Query: 400 FRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
F+ KPN++ L + +S +SL SL GK H +R G +S +++AL+ MY+
Sbjct: 214 FKEFNHSRLDKPNHFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVIASALVDMYA 273
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K G +N + ++F I + +TSMIV A++GLG ++QLF+ M+ IKP+ IT+V
Sbjct: 274 KCGCVNYSAKIFRRIQ-NPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRIKPNDITFV 332
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
GVL AC+H GLV++G + M + + P H+ + D+LGR G ++EAY +++ +
Sbjct: 333 GVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQV 392
Query: 579 EPDVVA--WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAA 636
E D A WG+LLSA R++ +D+ A+ +L+ +GAY L N Y+ G WE+A
Sbjct: 393 EGDGYAMLWGTLLSASRLYGRVDIALEASNRLIESNQQVAGAYVTLSNAYALAGDWENAH 452
Query: 637 NIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW-LHPQRDAIYNKMAKIWDEIKEMGFV 695
N+R MK+ GV K G SW++I+ ++F D + Q I + + ++ + +K G+V
Sbjct: 453 NLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGDISKYTQGREILSLLRELEERMKGRGYV 512
Query: 696 PDTAS-VLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
T V DVEE+ KE+++ HSEKLA+AFGLI+TP+ T+RIMKNLR+C DCH A K
Sbjct: 513 GGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGLINTPKGVTIRIMKNLRMCRDCHGAFKL 572
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
I +V+RE+VVRD RFHHFK GLC+C D+W
Sbjct: 573 ISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 205/475 (43%), Gaps = 98/475 (20%)
Query: 36 HARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRL 95
H+ ++K GL F N L+N Y + +I +A+K+FDE
Sbjct: 47 HSNVVKSGLSNDTFATNHLINCYLRLFTIDHAQKLFDE---------------------- 84
Query: 96 DLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASC 155
MP+R+ VSWT+++ Y G+ A+ +F +M VLP +FT +++ +C
Sbjct: 85 ---------MPHRNVVSWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINAC 135
Query: 156 TALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWN 215
+ L +L G+++H+ V +GL + +SL++MY K
Sbjct: 136 SILANLEIGRRIHALVEVSGLGSNLVACSSLIDMYGKCN--------------------- 174
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
+D AR FD M R+VV+W SMI YSQN AL +F K
Sbjct: 175 ----------HVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDK 224
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKI 335
P+ F L S +SACA+L L GK H +IR +A+ + +AL+ YAK G V + K
Sbjct: 225 PNHFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAK- 283
Query: 336 VEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKD 395
IF +++ V+ +T+M+VG + GL
Sbjct: 284 --------------------------------IFRRIQNPSVIPYTSMIVGAAKYGLGIL 311
Query: 396 AVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASA-LRSGEASSLSVSNALI 454
+++LF+ MV KPN+ T +L S +D G ++ S + G +
Sbjct: 312 SLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIA 371
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVS--WTSMIVALAQHGLGEEAIQLFERMLE 507
M + G I A ++ + + + W +++ A +G + A++ R++E
Sbjct: 372 DMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRLIE 426
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 48/228 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK+ H +I+ G S + ++L++ YAK ++Y+ K+F
Sbjct: 246 GKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRR------------------ 287
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
+ N + +T++IV + G ++++F EMV ++ P T V
Sbjct: 288 -------------IQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRIKPNDITFVGV 334
Query: 152 LASCTALGDLSAG-KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD----EMMAKAV---F 203
L +C+ G + G + + S K G++ + +M +VG +AK+V
Sbjct: 335 LHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQVEG 394
Query: 204 DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAG 251
DG + W ++S GR+D+A +++IE N +AG
Sbjct: 395 DGYAML----WGTLLSASRLYGRVDIALEASNRLIES-----NQQVAG 433
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/663 (34%), Positives = 371/663 (55%), Gaps = 69/663 (10%)
Query: 125 RFKNAIRMF-VEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
++++A+ MF + ++D T +++ +C L + K++ +++V G +
Sbjct: 111 KYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMR 170
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N +L M+ K G MM D RL FD+M R+ V
Sbjct: 171 NRVLLMHVKCG--MM----IDACRL-------------------------FDEMPARNAV 199
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W ++I+GY +G EA +F ++++ T A+ + A A LE + G+Q+H+
Sbjct: 200 SWGTIISGYVDSGNYVEAFRLFI-LMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSC 258
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
I+ G + +SC L+D Y K G +
Sbjct: 259 AIKA-----GLGQDIFVSC----------------------------ALIDMYSKCGSLE 285
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
A +FD + D+ +V W +++ GY +G +++A++L+ M G K +++T S ++ + S
Sbjct: 286 DAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICS 345
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
LAS+ KQ+HAS +R+G + + AL+ YSK G ++ AR VF+ + R +SW
Sbjct: 346 RLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRN-IISWN 404
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
++I HG GEEAI +FE+ML G+ P+H+T++ VL+AC+ GL E+G + M
Sbjct: 405 ALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRD 464
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKI 603
HK+KP HFA M++LLGR GLL EAY I P +P W +LL ACRVH NL+LGK
Sbjct: 465 HKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKF 524
Query: 604 AAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVH 663
AAEKL +EP+ Y L N+Y+S GK ++AA++ +++K G++ SW+++ N+ H
Sbjct: 525 AAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPH 584
Query: 664 VFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTAS-VLHDVEEDVKEQMLRHHSEKLA 722
F D H Q + + K+ ++ I ++G+VP+ + +L DV+E+ +E++ +HSEKLA
Sbjct: 585 AFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDEN-EEKIRMYHSEKLA 643
Query: 723 IAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCR 782
IA+GL++T E T L+I+++ R+C+DCHS IK I + REIV+RDA+RFHHF+ G CSC
Sbjct: 644 IAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCG 703
Query: 783 DYW 785
DYW
Sbjct: 704 DYW 706
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 230/507 (45%), Gaps = 77/507 (15%)
Query: 43 GLHLSVFLKNSLMNFYAKTESISYAKKVFDEM------PVKTLCSWNTILSAYAKQGRLD 96
G H+ ++L+N +SI K++ + M P + + N +L + K G +
Sbjct: 127 GFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYM--RNRVLLMHVKCGMMI 184
Query: 97 LACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCT 156
AC +F+ MP R++VSW TII Y + G + A R+F+ M ++ T +++ +
Sbjct: 185 DACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASA 244
Query: 157 ALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNV 216
L + G+++HS +K GL + V+ +L++MY+K G A VFD M K + W
Sbjct: 245 GLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGW-- 302
Query: 217 VVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKP 276
NS+IAGY+ +GY EAL ++ M +DS +K
Sbjct: 303 -----------------------------NSIIAGYALHGYSEEALDLYHEM-RDSGVKM 332
Query: 277 DKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIV 336
D FT + + C+ L + KQ+HA ++R F AL+ Y+K G V+ A+ +
Sbjct: 333 DHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVF 392
Query: 337 EQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDA 396
++ +S N+I +W A++ GY +G ++A
Sbjct: 393 DR--MSCRNII-------------------------------SWNALIAGYGNHGHGEEA 419
Query: 397 VELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNA-LIT 455
+++F M+REG PN+ T A+LS S + G +I S R + ++ A +I
Sbjct: 420 IDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIE 479
Query: 456 MYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHI 515
+ + G ++ A + ++ W +++ A HG E E++ G++P+ +
Sbjct: 480 LLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKL--YGMEPEKL 537
Query: 516 T-YVGVLTACTHGGLVEQGQRYYNMMK 541
+ Y+ +L G +++ + +K
Sbjct: 538 SNYIVLLNIYNSSGKLKEAADVFQTLK 564
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 164/351 (46%), Gaps = 39/351 (11%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +H+ IK GL +F+ +L++ Y+K S+ A VFDEMP KT+ WN+I++ Y
Sbjct: 250 FPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGY 309
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A G Y+E A+ ++ EM V FT +
Sbjct: 310 ALHG--------------------------YSE-----EALDLYHEMRDSGVKMDHFTFS 338
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++ C+ L ++ K+VH+ +V+ G V +L++ Y+K G A+ VFD M +
Sbjct: 339 IIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCR 398
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMF 265
N+ SWN +++ + + G + A F++M+ + VT+ ++++ S +G +F
Sbjct: 399 NIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIF 458
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+M +D +KP A + L + L + +A I + F T + AL+
Sbjct: 459 QSMTRDHKVKPRAMHFACMIEL---LGREGLLDEAYALIRKAPFQPTANMWAALLRACRV 515
Query: 326 VGGVEIAQKIVEQ-SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G +E+ + E+ G+ + + LL+ Y G + A +F +L+ +
Sbjct: 516 HGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRK 566
>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
Length = 866
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/724 (34%), Positives = 377/724 (52%), Gaps = 53/724 (7%)
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
SV W + E + +AI F EM V P + L +C G G+ VH+
Sbjct: 148 SVLWNKRVAMLAEAEEWGDAIAAFGEMRARGVAPDGYACARALHACGRAGAPREGQAVHA 207
Query: 170 FVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
K G ++ V L MYA+ D A+ V + V+ WNVVV+ G +D
Sbjct: 208 HAAKAGHVAAHPLVPGFLAGMYAESADVGAARRVLETEDAPPVA-WNVVVACCARLGLVD 266
Query: 229 LARAQFDQM-------IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
A ++M +E + TWN++++G ++NG D EA G+ ML D L+PD ++
Sbjct: 267 DALDLAERMARSGRLELEPSLATWNAVLSGCARNGRDREAFGVVRIML-DQGLQPDSSSM 325
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+S L + A+L L G + H + +R + + G A + YAK G +E AQK+ + +
Sbjct: 326 SSLLKSVASLGLLAHGMEAHGFFLRNQLEPDVYTGTAFVDMYAKCGHLEYAQKVFDT--L 383
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR----DRDVVAWTAMLVGYEQNGLNKDAV 397
N+ + +L+ GY G A + + ++ D DV W ++ GY NG + AV
Sbjct: 384 ELRNITTWNSLVAGYANAGQFDHALDLVEEMKRNRLDPDVTTWNGLINGYSVNGKSSQAV 443
Query: 398 ELFR-----------------------------------SMVREGPKPNNYTLSAMLSVS 422
L R M ++ +P+ T+S +L
Sbjct: 444 LLLRQIKAIGLTPNVVSWTSLISGSCNNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRAC 503
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+ LA L GK++H ALR + V ALI MYSK+GN+ +A+R+F I VS
Sbjct: 504 AGLALLKKGKELHCFALRRAYDRDMVVGTALIDMYSKSGNLASAQRIFERIQ-ENNLVSS 562
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+M+ LA HG G EAI LF M G+KPD IT+ +LTAC LV +G Y++ M++
Sbjct: 563 NAMLTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTACRSMDLVTEGWEYFDTMES 622
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
+ + PT ++A MVDLL R G L EA +FI P + WG+LL+ C +H NL L +
Sbjct: 623 RYGVTPTVENYACMVDLLARCGYLDEAMDFINKSPFKSVSSLWGALLTGCTLHGNLALAE 682
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
AA KL +EP NS Y + +LY +++A +++ +MK + G+SW+QI+ +
Sbjct: 683 AAARKLFKLEPYNSANYLQMVSLYEHEQMFDEAESLKYAMKARALDTRPGWSWIQIEQSI 742
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLA 722
HVF VE HP IY ++ ++ +I++ G+VPDT+ ++++V E+ KE++L H+EKLA
Sbjct: 743 HVFEVEGKPHPDTAEIYEELIRLVFQIRKSGYVPDTSCIVYNVPEEEKEKLLLSHTEKLA 802
Query: 723 IAFGLI-STPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSC 781
I +GLI S +R++KN R+CNDCH K I L R+I++RDA RFH+F G CSC
Sbjct: 803 ITYGLIHSDASRVPIRVIKNTRMCNDCHELAKHISALCARQIILRDADRFHYFTDGKCSC 862
Query: 782 RDYW 785
+ W
Sbjct: 863 NNCW 866
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 233/528 (44%), Gaps = 89/528 (16%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSV--FLKNSLMNFYAKTESISYAKKVF--- 71
A L + ++ P G+ VHA K G H++ + L YA++ + A++V
Sbjct: 187 ARALHACGRAGAPREGQAVHAHAAKAG-HVAAHPLVPGFLAGMYAESADVGAARRVLETE 245
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI-------G 124
D PV +WN +++ A+ G +D A ++ M + + T+N + G
Sbjct: 246 DAPPV----AWNVVVACCARLGLVDDALDLAERMARSGRLELEPSLATWNAVLSGCARNG 301
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
R + A + M+ + P +++S+L S +LG L+ G + H F ++ L V
Sbjct: 302 RDREAFGVVRIMLDQGLQPDSSSMSSLLKSVASLGLLAHGMEAHGFFLRNQLEPDVYTGT 361
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IER 240
+ ++MYAK G A+ VFD + L+N+++WN +V+ + ++G+ D A ++M ++
Sbjct: 362 AFVDMYAKCGHLEYAQKVFDTLELRNITTWNSLVAGYANAGQFDHALDLVEEMKRNRLDP 421
Query: 241 DVVTWNSMIAGYSQNGY----------------------------------DFEALGMFA 266
DV TWN +I GYS NG D+E F
Sbjct: 422 DVTTWNGLINGYSVNGKSSQAVLLLRQIKAIGLTPNVVSWTSLISGSCNNGDYEDSFYFF 481
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
N ++ ++P T++ L ACA L LK GK++H + +R +D VG ALI Y+K
Sbjct: 482 NEMQKDHVQPSVVTMSVLLRACAGLALLKKGKELHCFALRRAYDRDMVVGTALIDMYSKS 541
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G + AQ RIF+ +++ ++V+ AML G
Sbjct: 542 GNLASAQ---------------------------------RIFERIQENNLVSSNAMLTG 568
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEAS 445
+G +A+ LF M G KP++ T +A+L+ S+ + G + R G
Sbjct: 569 LAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTACRSMDLVTEGWEYFDTMESRYGVTP 628
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
++ ++ + ++ G ++ A N ++ + W +++ HG
Sbjct: 629 TVENYACMVDLLARCGYLDEAMDFINKSPFKSVSSLWGALLTGCTLHG 676
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 74/206 (35%), Gaps = 46/206 (22%)
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN----------LIHWRQETVSW 482
Q+H+ A+R+G A V+ AL + + G +ARR+ +++V W
Sbjct: 92 QLHSLAVRAGHARDPRVACALADLLVRLGRGASARRLLEEATAVEEEGEDGDEEEDSVLW 151
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+ LA+ +AI F M G+ PD L AC G +GQ +
Sbjct: 152 NKRVAMLAEAEEWGDAIAAFGEMRARGVAPDGYACARALHACGRAGAPREGQAVHAHAAK 211
Query: 543 -----VHKIKP-------------------------TPSHFASMVDLLGRAGLLQEAYNF 572
H + P P + +V R GL+ +A +
Sbjct: 212 AGHVAAHPLVPGFLAGMYAESADVGAARRVLETEDAPPVAWNVVVACCARLGLVDDALDL 271
Query: 573 IENMP------LEPDVVAWGSLLSAC 592
E M LEP + W ++LS C
Sbjct: 272 AERMARSGRLELEPSLATWNAVLSGC 297
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/687 (33%), Positives = 389/687 (56%), Gaps = 16/687 (2%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHA-----------RIIKCGLHLSVFLKNSLMNFYAKTES 63
+AHL+++ S+ KL+ +I+K + + N +++ Y + +
Sbjct: 43 LHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGN 102
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ A+ +FDEMP + SW+ ++S K GR++ + F P ++ VSWT I +
Sbjct: 103 LVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G A+++F +++ V P T TSV+ +C LGD G + VVK G ++V+
Sbjct: 163 GLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVS 222
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
NSL+ + ++G+ +A+ VFD M ++V SW ++ ++ +G L AR FD+M ER+ +
Sbjct: 223 NSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEI 282
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+W++MIA YSQ+GY EAL +F+ M+++ KP+ A TLSA A+L L G IH +
Sbjct: 283 SWSAMIARYSQSGYAEEALKLFSKMVQEG-FKPNISCFACTLSALASLRALSAGINIHGH 341
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
+ + D +G++LI Y K G + + + + I NV+ + +++ GY G +
Sbjct: 342 VTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL--ILEKNVVCWNSMVGGYSINGRLE 399
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
+F+ + +++ V+W ++ GY +N + +E+F +++ G PN T S++L +
Sbjct: 400 ETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACA 459
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
S+ASLD G +H ++ G + V AL MY+K G+I ++++VF + + E +SWT
Sbjct: 460 SIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNE-ISWT 518
Query: 484 SMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
MI LA+ G E++ LFE M + P+ + + VL AC+H GLV++G Y+N M+
Sbjct: 519 VMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEK 578
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK 602
V+ IKP H+ +VDLL R+G L EA FI +P +P+ AW +LLS C+ +K+ + +
Sbjct: 579 VYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAE 638
Query: 603 IAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKV 662
A+KL + +NS Y L N+Y+S G+W D +NIRK M+ G+KK+ G SWV+++N+V
Sbjct: 639 RTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQV 698
Query: 663 HVFGVEDWLHPQRDAIYNKMAKIWDEI 689
H F ED H Q + IY + + E+
Sbjct: 699 HSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 69/379 (18%)
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRT------------------------------EF 309
T S L +N + G +HA++I+T EF
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 310 DATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
D + V N +IS Y + G + A+ + ++ + N ++++ L+ G +K G + +
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDE--MPERNEVSWSALISGLMKYGRVEESMWY 140
Query: 369 FDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASL 428
F+ ++VV+WTA + G+ +NGLN +A++LF ++ G +PN+ T ++++ L
Sbjct: 141 FERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDF 200
Query: 429 DHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF------NLIHW------- 475
G I +++G LSVSN+LIT+ + G I+ ARRVF +++ W
Sbjct: 201 GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAY 260
Query: 476 -----------------RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
+ +SW++MI +Q G EEA++LF +M++ G KP+ +
Sbjct: 261 VETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFA 320
Query: 519 GVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENM 576
L+A + G N+ +V KI F +S++DL + G + + ++
Sbjct: 321 CTLSALASLRALSAG---INIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDG-RLVFDL 376
Query: 577 PLEPDVVAWGSLLSACRVH 595
LE +VV W S++ ++
Sbjct: 377 ILEKNVVCWNSMVGGYSIN 395
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/571 (36%), Positives = 335/571 (58%), Gaps = 40/571 (7%)
Query: 215 NVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL 274
NV++++++ L+ A FDQM +R+V++W +MI+ YS+ +AL + ML+D+ +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN-V 158
Query: 275 KPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQK 334
+P+ +T +S L +C + +++ +H II+ ++
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLES----------------------- 192
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+V + L+D + K+G+ A +FD + D + W +++ G+ QN +
Sbjct: 193 ----------DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD 242
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
A+ELF+ M R G TL+++L + LA L+ G Q H ++ + L ++NAL+
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALV 300
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY K G++ A RVFN + R + ++W++MI LAQ+G +EA++LFERM G KP++
Sbjct: 301 DMYCKCGSLEDALRVFNQMKER-DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
IT VGVL AC+H GL+E G Y+ MK ++ I P H+ M+DLLG+AG L +A +
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 575 NMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWED 634
M EPD V W +LL ACRV +N+ L + AA+K++ ++P+++G Y+ L N+Y++ KW+
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 635 AANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGF 694
IR M+ G+KK G SW+++ ++H F + D HPQ + K+ ++ + +G+
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 695 VPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKF 754
VP+T VL D+E + E LRHHSEKLA+AFGL++ P +RI KNLR+C DCH K
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 755 ICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
KL R IV+RD R+HHF+ G CSC DYW
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 211/474 (44%), Gaps = 102/474 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y+ L++ + +R G L+ + G +FL N L+N Y K ++ A ++FD+MP
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 123
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + SW T++SAY+K C++ + A+ + V
Sbjct: 124 QRNVISWTTMISAYSK-------CKI------------------------HQKALELLVL 152
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++D V P +T +SVL SC + D+ + +H ++K GL V V ++L++++AK+G+
Sbjct: 153 MLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +VFD M + WN S+I G++QN
Sbjct: 210 PEDALSVFDEMVTGDAIVWN-------------------------------SIIGGFAQN 238
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
AL +F M K + ++ TL S L AC L L+LG Q H +I++ +D +
Sbjct: 239 SRSDVALELFKRM-KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLIL 295
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+ Y K G +E A R+F+ +++R
Sbjct: 296 NNALVDMYCKCGSLE---------------------------------DALRVFNQMKER 322
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
DV+ W+ M+ G QNG +++A++LF M G KPN T+ +L S L+ G
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 436 ASALR-SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
S + G +I + KAG ++ A ++ N + + V+W +++ A
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 29/234 (12%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y K G L+ A VFN M RD ++W+T+I + G + A+++F M
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 143 PTQFTVTSVLASCTALGDLSAG-------KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
P T+ VL +C+ G L G KK++ GC ++++ K G
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC------MIDLLGKAGK 410
Query: 196 EMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMI---ERDVVTWNSMIAG 251
A + + M + + +W ++ + LA ++I D T+ ++++
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTY-TLLSN 469
Query: 252 YSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N ++++ ++D +K + C+ +E + KQIHA+II
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKE--------PGCSWIE---VNKQIHAFII 512
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/641 (35%), Positives = 348/641 (54%), Gaps = 69/641 (10%)
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+ +VL C L L KK+ + V+ GL ++NS+LN A
Sbjct: 11 AILTVLQGCNNLTRL---KKIQAHVIVNGLQNHPAISNSILNFCA--------------- 52
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
VS+ SG L A+ F ++ WNS+I G++Q+ +A+ +
Sbjct: 53 -----------VSI---SGSLPYAQHLFRHILNPQTQAWNSIIRGFAQSPSPVQAIFYYN 98
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML DS PD FT + TL AC ++ LK +++H IIRT ++ V L+ CY +
Sbjct: 99 RMLFDSVSGPDTFTFSFTLKACERIKALKKCEEVHGSIIRTGYERDVVVCTGLVRCYGRN 158
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G VEIA R +FD++ +RD+VAW AM+
Sbjct: 159 GCVEIA---------------------------------RMVFDNMPERDLVAWNAMISC 185
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q G +++A+ ++ M E + +TL +LS S + +L+ G ++H A G +
Sbjct: 186 YSQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRN 245
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ V NALI MY+K G+++ A VFN + ++ +W SMIV HG G+EAI F +ML
Sbjct: 246 VFVGNALIDMYAKCGSLDGALEVFNGM--PRDAFTWNSMIVGFGVHGFGDEAIYFFNQML 303
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
E G++P+ I ++G+L C+H GLVE+G +++ M + +KP H+ +VD+ GRAG L
Sbjct: 304 EAGVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKL 363
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
++A I + P + D V W LLS+ ++HKN+ +G+IA L + N+G L +Y
Sbjct: 364 EKALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIY 423
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+ + A +RK +K G+K T G+SW+++ ++VH F V+D HP + IY K+ ++
Sbjct: 424 AGANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSEMIYQKLEEVT 483
Query: 687 DEIKEMGFVPDTAS-VLH-DVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRV 744
+ G+V D + + H E+ E +HSEKLAIAFGL TPE T+LRI+KNLRV
Sbjct: 484 HKATMAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRV 543
Query: 745 CNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
C DCH KF+ + +R+I+VRD RFHHFK GLCSCRDYW
Sbjct: 544 CRDCHEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 193/474 (40%), Gaps = 102/474 (21%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAK--TESISYAKKVFDEMPVKTLCSWNTILSAYA 90
K + A +I GL + NS++NF A + S+ YA+ +F + +WN+I+ +A
Sbjct: 26 KKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFRHILNPQTQAWNSIIRGFA 85
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ S S I YN RM + V P FT +
Sbjct: 86 Q------------------SPSPVQAIFYYN---------RMLFDSVSG---PDTFTFSF 115
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L +C + L ++VH +++TG V V L+ Y + G +A+ VFD M ++
Sbjct: 116 TLKACERIKALKKCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERD 175
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
+ +WN +MI+ YSQ GY EAL ++ + ++
Sbjct: 176 LVAWN-------------------------------AMISCYSQAGYHQEALRVY-DYMR 203
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ ++ D FTL LS+C+++ L +G ++H VGNALI YAK G
Sbjct: 204 NENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNVFVGNALIDMYAKCGS-- 261
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
LDG +++ + P RD W +M+VG+ +
Sbjct: 262 ----------------------LDGALEVFNGMP----------RDAFTWNSMIVGFGVH 289
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G +A+ F M+ G +PN+ +L S ++ G + H + + +
Sbjct: 290 GFGDEAIYFFNQMLEAGVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKH 349
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
++ MY +AG + A + W+ + V W ++ + H +GE A++
Sbjct: 350 YGCIVDMYGRAGKLEKALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMR 403
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 343/559 (61%), Gaps = 5/559 (0%)
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+D A F +V + ++I G+ +G F+A+ +++ ML DS L PD + +AS L
Sbjct: 97 IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSIL-PDNYLMASILK 155
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
AC + L+ G+++H+ ++ + V ++ Y K G + A+++ E+ +V
Sbjct: 156 ACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMP---EDV 212
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
+A T ++ Y G + A +F +R +D V WTAM+ G+ +N A+E FR M E
Sbjct: 213 VASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGE 272
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
+PN +T+ +LS S L +L+ G+ +H+ + +L V NALI MYS+ G+I+ A
Sbjct: 273 NVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEA 332
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
+ VF+ + R + +++ +MI L+ +G +AI+LF M+ ++P ++T+VGVL AC+H
Sbjct: 333 QTVFDEMKDR-DVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSH 391
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
GGLV+ G + ++ M + ++P H+ MVDLLGR G L+EAY+ I M + PD + G
Sbjct: 392 GGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLG 451
Query: 587 SLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVG 646
+LLSAC++HKNL+LG+ A+ L +SG Y L ++Y+S GKW++AA +R MK G
Sbjct: 452 TLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAG 511
Query: 647 VKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
++K G S +++ N++H F + D HP+++ IY K+ ++ ++ G+ P+ VL D+E
Sbjct: 512 MQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIE 571
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
+ KE L HSE+LAI +GLIST T +R+MKNLRVC DCHSAIK I K+ R++VVR
Sbjct: 572 DGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVR 631
Query: 767 DATRFHHFKKGLCSCRDYW 785
D RFH+F+ G CSC DYW
Sbjct: 632 DRNRFHYFENGACSCGDYW 650
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 207/423 (48%), Gaps = 39/423 (9%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
+L + +K +D A +F N + +T +I + G + +AI+++ M+ D +LP
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 146
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ + S+L +C + L G++VHS +K GLS V ++ +Y K G+ A+ VF+
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
M ++V + V++S + G ++ A A F ++ +D V W +MI G+ +N AL
Sbjct: 207 EMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEA 265
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +++P++FT+ LSAC+ L L++G+ +H+Y+ + E + VGNALI+ Y+
Sbjct: 266 FRGM-QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 324
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+ G ++ AQ +FD ++DRDV+ + M+
Sbjct: 325 RCGSIDEAQT---------------------------------VFDEMKDRDVITYNTMI 351
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GE 443
G NG ++ A+ELFR M+ +P N T +L+ S +D G +I S R G
Sbjct: 352 SGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGV 411
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQ 500
+ ++ + + G + A + + + + +++ A H LGE+ +
Sbjct: 412 EPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAK 471
Query: 501 LFE 503
+ E
Sbjct: 472 VLE 474
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 180/384 (46%), Gaps = 46/384 (11%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ VH+R +K GL + ++ +M Y K + A++VF+EMP + S ++S+Y+
Sbjct: 166 GREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAS-TVMISSYSD 224
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
QG ++ A VF+ + +D+V WT +I + A+ F M + V P +FT+ V
Sbjct: 225 QGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCV 284
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L++C+ LG L G+ VHS++ K + + V N+L+NMY++ G A+ VFD M+
Sbjct: 285 LSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMK---- 340
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+RDV+T+N+MI+G S NG +A+ +F M+
Sbjct: 341 ---------------------------DRDVITYNTMISGLSMNGKSRQAIELFRVMI-G 372
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQI-----HAYIIRTEFDATGPVGNALISCYAKV 326
L+P T L+AC++ + G +I Y + + + G ++ +V
Sbjct: 373 RRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYG----CMVDLLGRV 428
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR---DVVAWTAM 383
G +E A ++ ++ + I TLL ++ ++ L DR D + +
Sbjct: 429 GRLEEAYDLIRTMKMT-PDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLL 487
Query: 384 LVGYEQNGLNKDAVELFRSMVREG 407
Y +G K+A ++ M G
Sbjct: 488 SHVYASSGKWKEAAQVRAKMKEAG 511
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 130/269 (48%), Gaps = 31/269 (11%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
LL K I A RIF + +V +TA++ G+ +G DA++L+ M+ + P+
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 146
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
NY ++++L S +L G+++H+ AL+ G +S+ V ++ +Y K G + ARRVF
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 472 LIH-----------------------------WRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ R++TV WT+MI ++ A++ F
Sbjct: 207 EMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAF 266
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M ++P+ T V VL+AC+ G +E G+ ++ M+ +I+ +++++ R
Sbjct: 267 RGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKF-EIELNLFVGNALINMYSR 325
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
G + EA + M + DV+ + +++S
Sbjct: 326 CGSIDEAQTVFDEMK-DRDVITYNTMISG 353
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 32/165 (19%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ VH+ + K + L++F+ N+L+N Y++ SI A+ VFDEM + + ++NT++S +
Sbjct: 296 IGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLS 355
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G+ A E+F +M IGR ++ PT T
Sbjct: 356 MNGKSRQAIELFRVM-----------------IGR--------------RLRPTNVTFVG 384
Query: 151 VLASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNSLLNMYAKVG 194
VL +C+ G + G K+ HS G+ + ++++ +VG
Sbjct: 385 VLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVG 429
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 25/202 (12%)
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGK---------------QIHASALRSGEASSLSVSN 451
GP P + S S SL SLD + IHA +R+G + +
Sbjct: 28 GPSPKPHPNSN--SNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVF 85
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
L+ SK I+ A R+F H +T++I G +AIQL+ RML I
Sbjct: 86 ELLRSCSKCHAIDYASRIFQYTH-NPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSIL 144
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM--VDLLGRAGLLQEA 569
PD+ +L AC + +G+ ++ K+ + + + ++L G+ G L +A
Sbjct: 145 PDNYLMASILKACGSQLALREGREVHS---RALKLGLSSNRLVRLRIMELYGKCGELGDA 201
Query: 570 YNFIENMPLEPDVVAWGSLLSA 591
E MP DVVA ++S+
Sbjct: 202 RRVFEEMP--EDVVASTVMISS 221
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/605 (35%), Positives = 341/605 (56%), Gaps = 51/605 (8%)
Query: 224 SGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAS 283
SG ++ A FD + + WN+MI GYS+ + + M+ ML S++KPD+FT
Sbjct: 54 SGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLT-SNIKPDRFTFPF 112
Query: 284 TLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISY 343
+L L+ GK++ + ++ FD+ V A I ++ G V++A K+ +
Sbjct: 113 SLKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMG--DA 170
Query: 344 LNVIAFTTLLDGYIKI-------------------------------------------G 360
V+ + +L GY ++ G
Sbjct: 171 CEVVTWNIMLSGYNRVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACG 230
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
++ A+ +FD+++ RDVV+WTAM+ GY + A+ LFR M KP+ +T+ ++L
Sbjct: 231 EMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILI 290
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L +L+ G+ + ++ + V NAL+ MY K GN+ A++VF + ++++
Sbjct: 291 ACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEM-YQKDKF 349
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
+WT+MIV LA +G GEEA+ +F M+E + PD ITY+GVL AC +V++G+ ++ M
Sbjct: 350 TWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNM 405
Query: 541 KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDL 600
H IKPT +H+ MVDLLG G L+EA I NMP++P+ + WGS L ACRVHKN+ L
Sbjct: 406 TMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQL 465
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
+AA+++L +EP+N Y LCN+Y++ KWE+ +RK M G+KKT G S +++
Sbjct: 466 ADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNG 525
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
V+ F D HPQ IY K+ + + + G+ PDT+ V D+ E+ KE L HSEK
Sbjct: 526 NVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEK 585
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LAIA+ LIS+ T+RI+KNLR+C DCH K + + +RE++V+D TRFHHF+ G CS
Sbjct: 586 LAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCS 645
Query: 781 CRDYW 785
C ++W
Sbjct: 646 CNNFW 650
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 212/528 (40%), Gaps = 111/528 (21%)
Query: 25 KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
K ++ + K +H+ IK GL +N ++ F ES
Sbjct: 16 KCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHES--------------------- 54
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
G ++ A +VF+ +P+ W T+I Y++I +N + M++ M+ + P
Sbjct: 55 --------GNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPD 106
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+FT L T L GK++ + VK G + V + ++M++ G +A VFD
Sbjct: 107 RFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFD 166
Query: 205 GMRLKNVSSWNVVVS-----------------------------LHIHS----------- 224
V +WN+++S HI
Sbjct: 167 MGDACEVVTWNIMLSGYNRVKQFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMF 226
Query: 225 ---GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
G +D A+ FD M RDVV+W +MI GY + + AL +F M + S++KPD+FT+
Sbjct: 227 AACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREM-QMSNVKPDEFTM 285
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
S L ACA L L+LG+ + I + VGNAL+ Y K G V
Sbjct: 286 VSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVR----------- 334
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
A+++F + +D WT M+VG NG ++A+ +F
Sbjct: 335 ----------------------KAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFS 372
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEASSLSVSNALITMYSKA 460
+M+ P+ T +L +D GK + ++ G +++ ++ +
Sbjct: 373 NMIEASVTPDEITYIGVLCA----CMVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCV 428
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
G + A V + + ++ W S + A H + A +++LEL
Sbjct: 429 GCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILEL 476
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 249/738 (33%), Positives = 395/738 (53%), Gaps = 71/738 (9%)
Query: 53 SLMNFYAKTESISYAKKVFDEMPVKTLCSW----NTILSAYAKQGRLDLACEVFNLMPNR 108
SL++ A ++ +SY V L S+ N +++ Y+ G+L A +F M R
Sbjct: 252 SLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRR 311
Query: 109 DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVH 168
D +SW T+I +Y + G +A++ +++ P + T +S L +C++ G L G+ VH
Sbjct: 312 DLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVH 371
Query: 169 SFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLD 228
+ ++ L + V NSL+ MY K ++ D R+
Sbjct: 372 AMTLQLSLHHNLLVGNSLITMYGK------CNSIEDAERI-------------------- 405
Query: 229 LARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSAC 288
F M DVV+ N +I Y+ +A+ +F M + +K + T+ + L +
Sbjct: 406 -----FQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWM-RRGEVKLNYITIVNILGSF 459
Query: 289 ANLEKLK-LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVI 347
+ L+ G +HAY I F + V N+LI+ YAK G
Sbjct: 460 TSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCG-------------------- 499
Query: 348 AFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
D+ + +F + +R VV+W AM+ Q+G +++++LF M +G
Sbjct: 500 -------------DLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDG 546
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
++ L+ +S S+SLASL+ G Q+H L+ G + V NA + MY K G ++
Sbjct: 547 NGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEML 606
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
++ R + W ++I A++G +EA + F+ M+ +G PD++T+V +L+AC+H
Sbjct: 607 KMLPDPAIRPQQC-WNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHA 665
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV++G YYN M +V + P H +VD+LGR G EA FIE+MP+ P+ + W S
Sbjct: 666 GLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRS 725
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LLS+ R HKNLD+G+ AA++LL ++P + AY L NLY++ +W D +R MK + +
Sbjct: 726 LLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINL 785
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
K SW++ + +V FG+ D H D IY K+ +I +++E+G+V DT+S LHD +E
Sbjct: 786 NKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVADTSSALHDTDE 845
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
+ KEQ L +HSEKLA+A+GLI+ PE T+RI KNLRVC DCH K + + DREIV+RD
Sbjct: 846 EQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRD 905
Query: 768 ATRFHHFKKGLCSCRDYW 785
RFHHFK G CSC D+W
Sbjct: 906 PYRFHHFKGGSCSCSDFW 923
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 252/564 (44%), Gaps = 105/564 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA K GL ++V++ +L++ Y + + A+++F EMP
Sbjct: 63 GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMP---------------- 106
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
R+ VSWT ++V + G + A+ + M ++++ +V
Sbjct: 107 ---------------ERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATV 151
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
++ C +L D AG +V S V+ +GL V+V NSL++M +G A+ +F M ++
Sbjct: 152 VSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDT 211
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
SWN +VS+ YS G ++ +F++M +
Sbjct: 212 VSWNALVSM-------------------------------YSHEGLCSKSFRVFSDMRRG 240
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
L+ D TL S +S CA+ + + G +H+ +RT + PV NAL++ Y+ G
Sbjct: 241 GLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAG---- 296
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
K+ D A +F ++ RD+++W M+ Y QNG
Sbjct: 297 --------------------------KLAD---AEFLFWNMSRRDLISWNTMISSYVQNG 327
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
N DA++ ++ P+ T S+ L SS +L G+ +HA L+ +L V N
Sbjct: 328 NNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGN 387
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+LITMY K +I A R+F L+ + VS +I + A G +A+Q+F M +K
Sbjct: 388 SLITMYGKCNSIEDAERIFQLMP-NHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVK 446
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKP---TPSHFA-SMVDLLGRAGLLQ 567
++IT V +L + T R Y + + + I + + + S++ + + G L+
Sbjct: 447 LNYITIVNILGSFTS----SNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLE 502
Query: 568 EAYNFIENMPLEPDVVAWGSLLSA 591
+ N + + + VV+W ++++A
Sbjct: 503 SSNNVFQRI-INRSVVSWNAMIAA 525
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 213/494 (43%), Gaps = 78/494 (15%)
Query: 105 MPN--RDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLS 162
MP+ R SW T I GR A M M + V + F + S++ +C +
Sbjct: 1 MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60
Query: 163 A-GKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLH 221
A G +H+ K GL V + +LL++Y + A+ +F M +NV
Sbjct: 61 ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNV---------- 110
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
V+W +++ S NG+ EALG + M ++ + +
Sbjct: 111 ---------------------VSWTALMVALSSNGHLEEALGYYRRMRRE-RIACNANAF 148
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
A+ +S C +LE G Q+ +++I + V N+LIS +G V A+K
Sbjct: 149 ATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEK------- 201
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
+F + +RD V+W A++ Y GL + +F
Sbjct: 202 --------------------------LFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFS 235
Query: 402 SMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
M R G + + TL +++SV +S + +G +H+ LR+G S + V NAL+ MYS A
Sbjct: 236 DMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSA 295
Query: 461 GNINAARRVFNLIHW---RQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
G + A +F W R++ +SW +MI + Q+G +A++ ++L PD +T+
Sbjct: 296 GKLADAEFLF----WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTF 351
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMP 577
L AC+ G + G+ + M + + S++ + G+ +++A + MP
Sbjct: 352 SSALGACSSPGALMDGRMVHAMTLQL-SLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410
Query: 578 LEPDVVAWGSLLSA 591
DVV+ L+ +
Sbjct: 411 -NHDVVSCNILIGS 423
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 180/402 (44%), Gaps = 44/402 (10%)
Query: 239 ERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK-LG 297
R +W + I+G + G D A M M ++ + F LAS ++AC E+ + G
Sbjct: 5 HRTPSSWYTAISGCVRCGRDSTAFSMLRGM-RERGVPLSGFALASLVTACERWEEGRACG 63
Query: 298 KQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYI 357
IHA + +G AL+ Y +QK V LD
Sbjct: 64 AAIHALTQKAGLMVNVYIGTALLHLYG-------SQKHV----------------LD--- 97
Query: 358 KIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSA 417
A+R+F + +R+VV+WTA++V NG ++A+ +R M RE N +
Sbjct: 98 -------AQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFAT 150
Query: 418 MLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQ 477
++S+ SL G Q+ + + SG +SV+N+LI+M G ++ A ++F + R
Sbjct: 151 VVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEER- 209
Query: 478 ETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRY 536
+TVSW +++ + GL ++ ++F M G ++ D T +++ C V G
Sbjct: 210 DTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGV 269
Query: 537 YNMM--KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CR 593
+++ +H P + ++V++ AG L +A NM D+++W +++S+ +
Sbjct: 270 HSLCLRTGLHSYIPVVN---ALVNMYSSAGKLADAEFLFWNMS-RRDLISWNTMISSYVQ 325
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDA 635
N+D K + L E + +S+ SS G D
Sbjct: 326 NGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDG 367
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +HA I G ++ NSL+ YAK + + VF + +++ SWN +++A +
Sbjct: 469 GLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQ 528
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G + ++++F++M D +
Sbjct: 529 H-------------------------------GHGEESLKLFMDMRHDGNGLDHICLAEC 557
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG--DEMMAKAVFDGMRLK 209
++S +L L G ++H +K GL +V N+ ++MY K G DEM+ +R +
Sbjct: 558 MSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQ 617
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIE----RDVVTWNSMIAGYSQNG 256
WN ++S + G A F MI D VT+ ++++ S G
Sbjct: 618 QC--WNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAG 666
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 82/216 (37%), Gaps = 41/216 (18%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G +H +KCGL + N+ M+ Y K + K+ + ++ WNT++S YA+
Sbjct: 570 GMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYAR 629
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G FK A F M+ P T ++
Sbjct: 630 -------------------------------YGYFKEAEETFKHMISVGRTPDYVTFVTL 658
Query: 152 LASCTALGDLSAGKKVHS-----FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
L++C+ G + G ++ F V G+ CV + + L ++G A+ + M
Sbjct: 659 LSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDIL----GRLGRFAEAEKFIEDM 714
Query: 207 R-LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
L N W ++S LD+ R +++E D
Sbjct: 715 PVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELD 750
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,734,487,616
Number of Sequences: 23463169
Number of extensions: 468067599
Number of successful extensions: 1432255
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8483
Number of HSP's successfully gapped in prelim test: 3534
Number of HSP's that attempted gapping in prelim test: 1160772
Number of HSP's gapped (non-prelim): 82164
length of query: 785
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 634
effective length of database: 8,816,256,848
effective search space: 5589506841632
effective search space used: 5589506841632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)