BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003937
(785 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/786 (66%), Positives = 643/786 (81%), Gaps = 1/786 (0%)
Query: 1 METPNPPSLISPLEFYAHLLQSNL-KSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYA 59
M+ P P SL + LE +LLQ ++ KS F +LVH R+IK GL SV+L N+LMN Y+
Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYS 60
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVT 119
KT +A+K+FDEMP++T SWNT+LSAY+K+G +D CE F+ +P RDSVSWTT+IV
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
Y IG++ AIR+ +MV++ + PTQFT+T+VLAS A + GKKVHSF+VK GL G
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 180 VNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
V+V+NSLLNMYAK GD MMAK VFD M ++++SSWN +++LH+ G++DLA AQF+QM E
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 240 RDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQ 299
RD+VTWNSMI+G++Q GYD AL +F+ ML+DS L PD+FTLAS LSACANLEKL +GKQ
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 300 IHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKI 359
IH++I+ T FD +G V NALIS Y++ GGVE A++++EQ G L + FT LLDGYIK+
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 360 GDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAML 419
GD+ A+ IF SL+DRDVVAWTAM+VGYEQ+G +A+ LFRSMV G +PN+YTL+AML
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 420 SVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
SV+SSLASL HGKQIH SA++SGE S+SVSNALITMY+KAGNI +A R F+LI ++T
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 480 VSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
VSWTSMI+ALAQHG EEA++LFE ML G++PDHITYVGV +ACTH GLV QG++Y++M
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
MK+V KI PT SH+A MVDL GRAGLLQEA FIE MP+EPDVV WGSLLSACRVHKN+D
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
LGK+AAE+LLL+EP+NSGAYSAL NLYS+CGKWE+AA IRKSMK VKK QGFSW++++
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
+KVHVFGVED HP+++ IY M KIWDEIK+MG+VPDTASVLHD+EE+VKEQ+LRHHSE
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 720
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
KLAIAFGLISTP+ TTLRIMKNLRVCNDCH+AIKFI KLV REI+VRD TRFHHFK G C
Sbjct: 721 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 780
Query: 780 SCRDYW 785
SCRDYW
Sbjct: 781 SCRDYW 786
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 301/793 (37%), Positives = 479/793 (60%), Gaps = 16/793 (2%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFV--GKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
PNP + + YA L+ L R + + VH II G + N L++ Y K+
Sbjct: 3 PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS 62
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP--NRDSVSWTTIIVT 119
++YA+++FDE+ + T++S Y G + LA VF P RD+V + +I
Sbjct: 63 SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSG 178
++ +AI +F +M + P FT SVLA + D + H+ +K+G
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGY 182
Query: 179 CVNVTNSLLNMYAKVGDE----MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+V+N+L+++Y+K A+ VFD + K+ SW +++ ++ +G DL
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELL 242
Query: 235 DQMIER-DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+ M + +V +N+MI+GY G+ EAL M M+ S ++ D+FT S + ACA
Sbjct: 243 EGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDEFTYPSVIRACATAGL 301
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L+LGKQ+HAY++R E D + N+L+S Y K G + A+ I E+ + +++++ LL
Sbjct: 302 LQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEK--MPAKDLVSWNALL 358
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
GY+ G IG A+ IF ++++++++W M+ G +NG ++ ++LF M REG +P +Y
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI 473
S + + L + +G+Q HA L+ G SSLS NALITMY+K G + AR+VF +
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 474 HWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQG 533
++VSW ++I AL QHG G EA+ ++E ML+ GI+PD IT + VLTAC+H GLV+QG
Sbjct: 479 PC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 537
Query: 534 QRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACR 593
++Y++ M+ V++I P H+A ++DLL R+G +A + IE++P +P W +LLS CR
Sbjct: 538 RKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 597
Query: 594 VHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGF 653
VH N++LG IAA+KL + P++ G Y L N++++ G+WE+ A +RK M+ GVKK
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVAC 657
Query: 654 SWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDV-KEQ 712
SW++++ +VH F V+D HP+ +A+Y + + E++ +G+VPDT+ VLHDVE D KE
Sbjct: 658 SWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKED 717
Query: 713 MLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFH 772
ML HSEK+A+AFGL+ P TT+RI KNLR C DCH+ +F+ +V R+I++RD RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFH 777
Query: 773 HFKKGLCSCRDYW 785
HF+ G CSC ++W
Sbjct: 778 HFRNGECSCGNFW 790
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 577 bits (1488), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/754 (40%), Positives = 453/754 (60%), Gaps = 37/754 (4%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
K++H II+ + FL N++++ YA +S +YA++VFD +P L SWN +L AY+K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTSV 151
G + F +P+RD V+W +I Y+ G A++ + M++D T+ T+ ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L ++ G +S GK++H V+K G + V + LL MYA VG AK VF G+ +N
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+N ++ + G ++ A F M E+D V+W +MI G +QNG EA+ F M K
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KV 263
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
LK D++ S L AC L + GKQIHA IIRT F VG+ALI
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI----------- 312
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
D Y K + A+ +FD ++ ++VV+WTAM+VGY Q G
Sbjct: 313 ----------------------DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG 350
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN 451
++AV++F M R G P++YTL +S ++++SL+ G Q H A+ SG ++VSN
Sbjct: 351 RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSN 410
Query: 452 ALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIK 511
+L+T+Y K G+I+ + R+FN ++ R + VSWT+M+ A AQ G E IQLF++M++ G+K
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 512 PDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYN 571
PD +T GV++AC+ GLVE+GQRY+ +M + + I P+ H++ M+DL R+G L+EA
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGK 631
FI MP PD + W +LLSACR NL++GK AAE L+ ++P + Y+ L ++Y+S GK
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 589
Query: 632 WEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKE 691
W+ A +R+ M+ VKK G SW++ + K+H F +D P D IY K+ ++ ++I +
Sbjct: 590 WDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIID 649
Query: 692 MGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSA 751
G+ PDT+ V HDVEE VK +ML +HSE+LAIAFGLI P +R+ KNLRVC DCH+A
Sbjct: 650 NGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNA 709
Query: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
K I + REI+VRDA RFH FK G CSC D+W
Sbjct: 710 TKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 223/485 (45%), Gaps = 69/485 (14%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H ++IK G + + + L+ YA IS AKKVF + + +N+++
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G ++ A ++F M +DSVSW +I + G K AI F EM + Q+ S
Sbjct: 217 ACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL +C LG ++ GK++H+ +++T + V ++L++MY K AK VFD M+ KN
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V SW +M+ GY Q G EA+ +F +M +
Sbjct: 336 VVSW-------------------------------TAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S + PD +TL +SACAN+ L+ G Q H I + V N+L++ Y K
Sbjct: 365 -SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC---- 419
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
GDI + R+F+ + RD V+WTAM+ Y Q
Sbjct: 420 -----------------------------GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G + ++LF MV+ G KP+ TL+ ++S S ++ G++ G S+
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+ +I ++S++G + A R N + + + + WT+++ A G E E ++EL
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL- 569
Query: 510 IKPDH 514
P H
Sbjct: 570 -DPHH 573
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 446/764 (58%), Gaps = 69/764 (9%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G+ HA + G +VF+ N+L+ Y++ S+S A+KVFDEM V W
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV-----W--------- 191
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQFTVTS 150
D VSW +II +Y ++G+ K A+ MF M + P T+ +
Sbjct: 192 -----------------DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVN 234
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL C +LG S GK++H F V + + + V N L++MYAK G A VF M +K+
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGMFA 266
V SWN +V+ + GR + A F++M I+ DVVTW++ I+GY+Q G +EALG+
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
ML S +KP++ TL S LS CA++ L GK+IH Y I+ D
Sbjct: 355 QMLS-SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID---------------- 397
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSL--RDRDVVAWTAML 384
+ ++G N++ L+D Y K + AR +FDSL ++RDVV WT M+
Sbjct: 398 ---------LRKNGHGDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 385 VGYEQNGLNKDAVELFRSMVREG--PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
GY Q+G A+EL M E +PN +T+S L +SLA+L GKQIHA ALR+
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 443 E-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
+ A L VSN LI MY+K G+I+ AR VF+ + + E V+WTS++ HG GEEA+ +
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEALGI 566
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M +G K D +T + VL AC+H G+++QG Y+N MK V + P P H+A +VDLLG
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L A IE MP+EP V W + LS CR+H ++LG+ AAEK+ + ++ G+Y+
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L NLY++ G+W+D IR M++ GVKK G SWV+ F V D HP IY
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ IK++G+VP+T LHDV+++ K+ +L HSEKLA+A+G+++TP+ +RI KN
Sbjct: 747 LLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKN 806
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+A ++ +++D +I++RD++RFHHFK G CSC+ YW
Sbjct: 807 LRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 270/561 (48%), Gaps = 59/561 (10%)
Query: 57 FYAKTESISYAKKVFDEM---PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDS--V 111
F K ++IS K + ++ + TL + ++S Y G L A + P D+
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
W ++I +Y + G + +F M P +T V +C + + G+ H+
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+ TG V V N+L+ MY+ R +++S AR
Sbjct: 154 LVTGFISNVFVGNALVAMYS---------------RCRSLSD----------------AR 182
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
FD+M DVV+WNS+I Y++ G AL MF+ M + +PD TL + L CA+L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
LGKQ+H + + +E VGN L+ YAK G ++ A + S +S +V+++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF--SNMSVKDVVSWNA 300
Query: 352 LLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
++ GY +IG A R+F+ +++ DVV W+A + GY Q GL +A+ + R M+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASAL-------RSGEASSLSVSNALITMYSKA 460
KPN TL ++LS +S+ +L HGK+IH A+ ++G V N LI MY+K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 461 GNINAARRVFNLIHWRQ-ETVSWTSMIVALAQHGLGEEAIQLFERMLE--LGIKPDHITY 517
++ AR +F+ + ++ + V+WT MI +QHG +A++L M E +P+ T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 518 VGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFAS--MVDLLGRAGLLQEAYNFIE 574
L AC + G++ + ++N P F S ++D+ + G + +A +
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPL---FVSNCLIDMYAKCGSISDARLVFD 537
Query: 575 NMPLEPDVVAWGSLLSACRVH 595
NM + + V W SL++ +H
Sbjct: 538 NM-MAKNEVTWTSLMTGYGMH 557
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 234/502 (46%), Gaps = 86/502 (17%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H + + ++F+ N L++ YAK + A VF M VK + SWN +++ Y+
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+ GR + A +F M D V+W+ I Y + G A+ + +M+ + P +
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-------VTNSLLNMYAKVGDEMMA 199
T+ SVL+ C ++G L GK++H + +K + N V N L++MYAK A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+A+FD + K ERDVVTW MI GYSQ+G
Sbjct: 427 RAMFDSLSPK-----------------------------ERDVVTWTVMIGGYSQHGDAN 457
Query: 260 EALGMFANML-KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP--VG 316
+AL + + M +D +P+ FT++ L ACA+L L++GKQIHAY +R + +A P V
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV-PLFVS 516
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI YAK G I AR +FD++ ++
Sbjct: 517 NCLIDMYAKCG---------------------------------SISDARLVFDNMMAKN 543
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
V WT+++ GY +G ++A+ +F M R G K + TL +L S +D G + +
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME-YF 602
Query: 437 SALRS--GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG- 493
+ +++ G + L+ + +AG +NAA R+ + V W + + HG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 494 --LGEEAIQLFERMLELGIKPD 513
LGE A E++ EL D
Sbjct: 663 VELGEYAA---EKITELASNHD 681
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 278/710 (39%), Positives = 419/710 (59%), Gaps = 40/710 (5%)
Query: 81 SWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
S + ++S Y L A +F + + ++W ++I + + F A+ FVEM
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKV---GDEM 197
P SVL SCT + DL G+ VH F+V+ G+ + N+L+NMYAK+ G ++
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160
Query: 198 MAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
VFD M R N +V I +D R F+ M +DVV++N++IAGY+Q+
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +AL M M + LKPD FTL+S L + + GK+IH Y+IR D+ +
Sbjct: 221 GMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
G++L+ YAK +E ++ R+F L R
Sbjct: 280 GSSLVDMYAKSARIEDSE---------------------------------RVFSRLYCR 306
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D ++W +++ GY QNG +A+ LFR MV KP S+++ + LA+L GKQ+H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
LR G S++ +++AL+ MYSK GNI AAR++F+ ++ E VSWT++I+ A HG G
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE-VSWTAIIMGHALHGHG 425
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
EA+ LFE M G+KP+ + +V VLTAC+H GLV++ Y+N M V+ + H+A+
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+ DLLGRAG L+EAYNFI M +EP W +LLS+C VHKNL+L + AEK+ ++ +N
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
GAY +CN+Y+S G+W++ A +R M+ G++K SW++++NK H F D HP
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
D I + + +++++ G+V DT+ VLHDV+E+ K ++L HSE+LA+AFG+I+T TT
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+ KN+R+C DCH AIKFI K+ +REI+VRD +RFHHF +G CSC DYW
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 222/483 (45%), Gaps = 71/483 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY---AKKVFDEMPVKTLCSWNTILSA 88
G+ VH I++ G+ ++ N+LMN YAK + VFDEMP +T S + + A
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 89 YA--KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
+D VF +MP +D VS+ TII Y + G +++A+RM EM + P F
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
T++SVL + D+ GK++H +V++ G+ V + +SL++MYAK ++ VF +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
++ SWN +V+ ++ +GR + A F QM+ V
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV------------------------ 339
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
KP +S + ACA+L L LGKQ+H Y++R F + + +AL+ Y+K
Sbjct: 340 --------KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
G ++ A R+IFD + D V+WTA+++G
Sbjct: 392 GNIKAA---------------------------------RKIFDRMNVLDEVSWTAIIMG 418
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR-SGEAS 445
+ +G +AV LF M R+G KPN A+L+ S + +D S + G
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
L A+ + +AG + A + + W++++ + + H E A ++ E++
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 506 LEL 508
+
Sbjct: 539 FTV 541
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P + S + AHL +L GK +H +++ G ++F+ ++L++ Y+K +
Sbjct: 341 PGAVAFSSVIPACAHLATLHL-------GKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVT 119
I A+K+FD M V SW I+ +A G A +F M + + V++ ++
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Query: 120 YNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGC 179
+ +G A F M + L + + +A LG ++ ++F+ K C
Sbjct: 454 CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL--LGRAGKLEEAYNFISKM----C 507
Query: 180 VNVTNSL 186
V T S+
Sbjct: 508 VEPTGSV 514
Score = 39.7 bits (91), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 415 LSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIH 474
+ ++ + + S KQ+HA +R+ S S S +I++Y+ ++ A +F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLK 66
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
++W S+I L +A+ F M G PDH + VL +CT
Sbjct: 67 -SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/759 (36%), Positives = 434/759 (57%), Gaps = 60/759 (7%)
Query: 36 HARIIKCGLHLSVFLK---------NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
+ R +C L VF + N +++ Y + A+K+FDEMP + L SWN ++
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMI 133
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
Y + L A E+F +MP RD SW T++ Y + G +A +F M + +
Sbjct: 134 KGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
+++ + + + + + K+ + + N LL + K + A+ FD M
Sbjct: 194 LLSAYVQN--------SKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFA 266
+++V SWN +++ + SG++D AR FD+ +DV TW +M++GY QN EA +F
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 267 NMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKV 326
M P++ ++ NA+++ Y +
Sbjct: 306 KM-------PERNEVS---------------------------------WNAMLAGYVQG 325
Query: 327 GGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVG 386
+E+A+++ + + NV + T++ GY + G I A+ +FD + RD V+W AM+ G
Sbjct: 326 ERMEMAKELFDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 387 YEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASS 446
Y Q+G + +A+ LF M REG + N + S+ LS + + +L+ GKQ+H ++ G +
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
V NAL+ MY K G+I A +F + ++ VSW +MI ++HG GE A++ FE M
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 507 ELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLL 566
G+KPD T V VL+AC+H GLV++G++Y+ M + + P H+A MVDLLGRAGLL
Sbjct: 503 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 562
Query: 567 QEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
++A+N ++NMP EPD WG+LL A RVH N +L + AA+K+ +EP+NSG Y L NLY
Sbjct: 563 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
+S G+W D +R M+ GVKK G+SW++IQNK H F V D HP++D I+ + ++
Sbjct: 623 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 682
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCN 746
+K+ G+V T+ VLHDVEE+ KE+M+R+HSE+LA+A+G++ +R++KNLRVC
Sbjct: 683 LRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCE 742
Query: 747 DCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH+AIK++ ++ R I++RD RFHHFK G CSC DYW
Sbjct: 743 DCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK +H R++K G F+ N+L+ Y K SI A +F EM K + SWNT+++ Y+
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G + E+ A+R F M ++ + P T+ +
Sbjct: 487 RHG--------------------------FGEV-----ALRFFESMKREGLKPDDATMVA 515
Query: 151 VLASCTALGDLSAGKK 166
VL++C+ G + G++
Sbjct: 516 VLSACSHTGLVDKGRQ 531
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 303/825 (36%), Positives = 447/825 (54%), Gaps = 131/825 (15%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+ G+ +H + IK G V + SL++ Y K + +KVFDEM
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK------------ 155
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
R+ V+WTT+I Y + +F+ M + P FT
Sbjct: 156 -------------------ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT 196
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+ L G G +VH+ VVK GL + V+NSL+N+Y K G+
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN------------ 244
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+ AR FD+ + VVTWNSMI+GY+ NG D EALGMF +
Sbjct: 245 -------------------VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI----------IRTE--------- 308
M + + ++ + + AS + CANL++L+ +Q+H + IRT
Sbjct: 286 M-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 309 --------FDATGPVGN-----ALISCYAKVGGVEIA--------QKIVEQSGISY---- 343
F G VGN A+IS + + G E A +K V + +Y
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 344 --LNVIA-------------------FTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
L VI+ T LLD Y+K+G + A ++F + D+D+VAW+A
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL-ASLDHGKQIHASALRS 441
ML GY Q G + A+++F + + G KPN +T S++L+V ++ AS+ GKQ H A++S
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
SSL VS+AL+TMY+K GNI +A VF ++ VSW SMI AQHG +A+ +
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+ M + +K D +T++GV ACTH GLVE+G++Y+++M KI PT H + MVDL
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
RAG L++A IENMP W ++L+ACRVHK +LG++AAEK++ ++P++S AY
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+Y+ G W++ A +RK M VKK G+SW++++NK + F D HP +D IY K
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ + +K++G+ PDT+ VL D++++ KE +L HSE+LAIAFGLI+TP+ + L I+KN
Sbjct: 764 LEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKN 823
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKK-GLCSCRDYW 785
LRVC DCH IK I K+ +REIVVRD+ RFHHF G+CSC D+W
Sbjct: 824 LRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 226/498 (45%), Gaps = 71/498 (14%)
Query: 94 RLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
RL A +F+ P RD S+ +++ ++ GR + A R+F+ + + + +SVL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
L D G+++H +K G V+V SL++ Y K + + VFD M+ +N
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN--- 158
Query: 214 WNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSS 273
VVTW ++I+GY++N + E L +F M ++
Sbjct: 159 ----------------------------VVTWTTLISGYARNSMNDEVLTLFMRM-QNEG 189
Query: 274 LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQ 333
+P+ FT A+ L A G Q+H +++ D T PV N+LI+ Y K G V
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR--- 246
Query: 334 KIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLN 393
AR +FD + VV W +M+ GY NGL+
Sbjct: 247 ------------------------------KARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 394 KDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNAL 453
+A+ +F SM + + + ++++ + ++L L +Q+H S ++ G ++ AL
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 454 ITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
+ YSK + A R+F I VSWT+MI Q+ EEA+ LF M G++P+
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI 573
TY +LTA ++ + + ++K ++ T +++D + G ++EA
Sbjct: 397 EFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVF 451
Query: 574 ENMPLEPDVVAWGSLLSA 591
+ + D+VAW ++L+
Sbjct: 452 SGID-DKDIVAWSAMLAG 468
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 35/305 (11%)
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTL 281
+ S RL A FD+ RD ++ S++ G+S++G EA +F N+ + ++ D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHR-LGMEMDCSIF 96
Query: 282 ASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGI 341
+S L A L G+Q+H I+ F VG +L+ Y K + +K+ ++ +
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE--M 154
Query: 342 SYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFR 401
NV+ +TTL+ GY + N +N + + LF
Sbjct: 155 KERNVVTWTTLISGYAR-------------------------------NSMNDEVLTLFM 183
Query: 402 SMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAG 461
M EG +PN++T +A L V + G Q+H +++G ++ VSN+LI +Y K G
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG 243
Query: 462 NINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVL 521
N+ AR +F+ + V+W SMI A +GL EA+ +F M ++ ++ V+
Sbjct: 244 NVRKARILFDKTEVKS-VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 522 TACTH 526
C +
Sbjct: 303 KLCAN 307
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 130/255 (50%), Gaps = 12/255 (4%)
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
+G++ + + F G + + A +FD RD ++ ++L G+ ++G ++A
Sbjct: 25 NGVAQVRIYCF-----GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKR 79
Query: 399 LFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYS 458
LF ++ R G + + S++L VS++L G+Q+H ++ G +SV +L+ Y
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 459 KAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYV 518
K N R+VF+ + R V+WT++I A++ + +E + LF RM G +P+ T+
Sbjct: 140 KGSNFKDGRKVFDEMKERN-VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 519 GVLTACTHGGLVEQG-QRYYNMMKN-VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENM 576
L G+ +G Q + ++KN + K P + S+++L + G +++A +
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN---SLINLYLKCGNVRKARILFDKT 255
Query: 577 PLEPDVVAWGSLLSA 591
++ VV W S++S
Sbjct: 256 EVKS-VVTWNSMISG 269
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/756 (36%), Positives = 428/756 (56%), Gaps = 97/756 (12%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F G+ +HA K G + ++ +L+N YAK I A F E V+ + WN +L AY
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G LD +N+ R+F +M ++++P Q+T
Sbjct: 466 ---GLLD----------------------------DLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
S+L +C LGDL G+++HS ++KT V + L++MYAK+G K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG--------------K 540
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
++W++++ + +DVV+W +MIAGY+Q +D +AL F ML
Sbjct: 541 LDTAWDILI-----------------RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
D ++ D+ L + +SACA L+ LK G+QIHA + F + P NAL++ Y++ G +
Sbjct: 584 -DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
E SYL F+ D +AW A++ G++Q
Sbjct: 643 EE----------SYL-----------------------AFEQTEAGDNIAWNALVSGFQQ 669
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+G N++A+ +F M REG NN+T + + +S A++ GKQ+HA ++G S V
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 729
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
NALI+MY+K G+I+ A + F + + E VSW ++I A ++HG G EA+ F++M+
Sbjct: 730 CNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P+H+T VGVL+AC+H GLV++G Y+ M + + + P P H+ +VD+L RAGLL A
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
FI+ MP++PD + W +LLSAC VHKN+++G+ AA LL +EP++S Y L NLY+
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVS 908
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
KW+ R+ MK GVKK G SW++++N +H F V D HP D I+ +
Sbjct: 909 KKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRA 968
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
E+G+V D S+L++++ + K+ ++ HSEKLAI+FGL+S P + +MKNLRVCNDCH
Sbjct: 969 SEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCH 1028
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ IKF+ K+ +REI+VRDA RFHHF+ G CSC+DYW
Sbjct: 1029 AWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 243/510 (47%), Gaps = 70/510 (13%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N ++ Y++ G +DLA VF+ + +D SW +I ++ AIR+F +M ++
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
PT + +SVL++C + L G+++H V+K G S V N+L+++Y +G
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG-------- 337
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
N++ + HI F M +RD VT+N++I G SQ GY +A+
Sbjct: 338 ------------NLISAEHI-----------FSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M D L+PD TLAS + AC+ L G+Q+HAY + F + + AL++
Sbjct: 375 ELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK +E A ++ + NV+ + +L Y + D+ + RIF ++ ++V
Sbjct: 434 YAKCADIETALDYFLETEVE--NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV---- 487
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
PN YT ++L L L+ G+QIH+ +++
Sbjct: 488 ---------------------------PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWR-QETVSWTSMIVALAQHGLGEEAIQL 501
+ V + LI MY+K G ++ A + LI + ++ VSWT+MI Q+ ++A+
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +ML+ GI+ D + ++AC +++GQ+ + V ++V L
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH-AQACVSGFSSDLPFQNALVTLYS 637
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
R G ++E+Y E D +AW +L+S
Sbjct: 638 RCGKIEESYLAFEQTE-AGDNIAWNALVSG 666
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 159/618 (25%), Positives = 279/618 (45%), Gaps = 111/618 (17%)
Query: 19 LLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL+ LK+ G+ +H++I+K GL + L L +FY + A KVFDEMP +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
T+ +WN ++ A + +L EVF L FV MV
Sbjct: 150 TIFTWNKMIKELASR---NLIGEVFGL----------------------------FVRMV 178
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAG--KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
+ V P + T + VL +C G ++ +++H+ ++ GL V N L+++Y++ G
Sbjct: 179 SENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF 237
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+A+ VFDG+RLK+ SS W +MI+G S+N
Sbjct: 238 VDLARRVFDGLRLKDHSS-------------------------------WVAMISGLSKN 266
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
+ EA+ +F +M + P + +S LSAC +E L++G+Q+H +++ F + V
Sbjct: 267 ECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
NAL+S Y +G + A+ I F ++ R
Sbjct: 326 CNALVSLYFHLGNLISAEHI---------------------------------FSNMSQR 352
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V + ++ G Q G + A+ELF+ M +G +P++ TL++++ S+ +L G+Q+H
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
A + G AS+ + AL+ +Y+K +I A F L + V W M+VA
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYF-LETEVENVVLWNVMLVAYGLLDDL 471
Query: 496 EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
+ ++F +M I P+ TY +L C G +E G++ ++ + + + +
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSV 530
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IE 612
++D+ + G L A++ + DVV+W +++ A N D + + +L I
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMI-AGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 613 PDNSGAYSALCNLYSSCG 630
D G L N S+C
Sbjct: 589 SDEVG----LTNAVSACA 602
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 251/568 (44%), Gaps = 105/568 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H ++K G ++ N+L++ Y ++ A+ +F M + ++NT+++ +
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ G Y E A+ +F M D + P T+ S
Sbjct: 366 QCG--------------------------YGE-----KAMELFKRMHLDGLEPDSNTLAS 394
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
++ +C+A G L G+++H++ K G + + +LLN+YAK D A F ++N
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V WNV++ + G LD R F +F M +
Sbjct: 455 VVLWNVML---VAYGLLDDLRNSFR----------------------------IFRQM-Q 482
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+ P+++T S L C L L+LG+QIH+ II+T F V + LI YAK+G ++
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A I +I F +DVV+WT M+ GY Q
Sbjct: 543 TAWDI----------LIRFA-----------------------GKDVVSWTTMIAGYTQY 569
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ A+ FR M+ G + + L+ +S + L +L G+QIHA A SG +S L
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
NAL+T+YS+ G I + F + ++W +++ Q G EEA+++F RM GI
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
++ T+ + A + ++QG++ + ++ T A ++ + + G + +A
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA-LISMYAKCGSISDA- 746
Query: 571 NFIENMPLE---PDVVAWGSLLSACRVH 595
E LE + V+W ++++A H
Sbjct: 747 ---EKQFLEVSTKNEVSWNAIINAYSKH 771
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 234/536 (43%), Gaps = 106/536 (19%)
Query: 141 VLPTQFTVTSVLASCTAL-GDLSAGKKVHSFVVKTGL--SGCVNVTNSLLNMYAKVGDEM 197
+ P T+ +L C G L G+K+HS ++K GL +GC
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGC------------------ 121
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
+++ +FD ++ G L A FD+M ER + TWN MI +
Sbjct: 122 LSEKLFD---------------FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNL 166
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSAC-ANLEKLKLGKQIHAYIIRTEFDATGPVG 316
E G+F M+ ++ + P++ T + L AC + +QIHA I+ + V
Sbjct: 167 IGEVFGLFVRMVSEN-VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N LI Y++ G V++A RR+FD LR +D
Sbjct: 226 NPLIDLYSRNGFVDLA---------------------------------RRVFDGLRLKD 252
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+W AM+ G +N +A+ LF M G P Y S++LS + SL+ G+Q+H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
L+ G +S V NAL+++Y GN+ +A +F+ + R + V++ ++I L+Q G GE
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGE 371
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYY------------------- 537
+A++LF+RM G++PD T ++ AC+ G + +GQ+ +
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431
Query: 538 NMMKNVHKIKPTPSHFAS-----------MVDLLGRAGLLQEAYNFIENMPLE---PDVV 583
N+ I+ +F M+ G L+ ++ M +E P+
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 584 AWGSLLSACRVHKNLDLGKIAAEKLLLIEPD-NSGAYSALCNLYSSCGKWEDAANI 638
+ S+L C +L+LG+ +++ N+ S L ++Y+ GK + A +I
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 51/284 (17%)
Query: 402 SMVREGPKPNNYTLSAMLS-VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA 460
S+ G +PN+ TL +L + SLD G+++H+ L+ G S+ +S L Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 461 GNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGV 520
G++ A +VF+ + R +W MI LA L E LF RM+ + P+ T+ GV
Sbjct: 134 GDLYGAFKVFDEMPERT-IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV 192
Query: 521 LTACTHGGLVEQGQRYYNMMKNVHK------IKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
L AC G + +++++ +H ++ + ++DL R G + A +
Sbjct: 193 LEACRGGSVA------FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 575 NMPLE----------------------------------PDVVAWGSLLSACRVHKNLDL 600
+ L+ P A+ S+LSAC+ ++L++
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 601 GKIAAEKLLLIEPDNSGAY--SALCNLYSSCGKWEDAANIRKSM 642
G+ L+L +S Y +AL +LY G A +I +M
Sbjct: 307 GE-QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/755 (37%), Positives = 411/755 (54%), Gaps = 98/755 (12%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H ++K G L +F L N YAK ++ A+KVFD
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR----------------- 195
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
MP RD VSW TI+ Y++ G + A+ M M ++ + P+ T+ S
Sbjct: 196 --------------MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL + +AL +S GK++H + +++G VN++ +L++MYAK G
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS--------------- 286
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
L+ AR FD M+ER+VV+WNSMI Y QN EA+ +F ML
Sbjct: 287 ----------------LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML- 329
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
D +KP ++ L ACA+L L+ G+ IH + D V N+LIS Y K
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK--- 386
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
++ A +F L+ R +V+W AM++G+ QN
Sbjct: 387 ------------------------------EVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G DA+ F M KP+ +T ++++ + L+ H K IH +RS ++ V+
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
AL+ MY+K G I AR +F+++ R T +W +MI HG G+ A++LFE M + I
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVT-TWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
KP+ +T++ V++AC+H GLVE G + + MMK + I+ + H+ +MVDLLGRAG L EA+
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCG 630
+FI MP++P V +G++L AC++HKN++ + AAE+L + PD+ G + L N+Y +
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 631 KWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIK 690
WE +R SM G++KT G S V+I+N+VH F HP IY + K+ IK
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIK 715
Query: 691 EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHS 750
E G+VPDT VL VE DVKEQ+L HSEKLAI+FGL++T TT+ + KNLRVC DCH+
Sbjct: 716 EAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 774
Query: 751 AIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
A K+I + REIVVRD RFHHFK G CSC DYW
Sbjct: 775 ATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 166/623 (26%), Positives = 270/623 (43%), Gaps = 128/623 (20%)
Query: 2 ETPNPPS----LIS-----PLEFYAH---LLQSNLKSRNPFVGKLVHARIIKCGLHLSVF 49
+ PNPPS +S P Y H LL S + + + K GL+ F
Sbjct: 13 QIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKEL--RQILPLVFKNGLYQEHF 70
Query: 50 LKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRD 109
+ L++ + + S+ A +VF+ + K ++T+L +AK LD
Sbjct: 71 FQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLD------------- 117
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
A++ FV M D V P + T +L C +L GK++H
Sbjct: 118 ------------------KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
+VK+G S + L NMYAK A+ VFD M +++ SWN +V
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV----------- 208
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AGYSQNG AL M +M ++ +LKP T+ S L A +
Sbjct: 209 --------------------AGYSQNGMARMALEMVKSMCEE-NLKPSFITIVSVLPAVS 247
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L + +GK+IH Y +R+ FD+ + AL+ YAK G +E A+++ + G+ NV+++
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSW 305
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
+++D Y+ QN K+A+ +F+ M+ EG K
Sbjct: 306 NSMIDAYV-------------------------------QNENPKEAMLIFQKMLDEGVK 334
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P + ++ L + L L+ G+ IH ++ G ++SV N+LI+MY K ++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F + R VSW +MI+ AQ+G +A+ F +M +KPD TYV V+TA +
Sbjct: 395 FGKLQSRT-LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 530 VEQGQRYYNMM------KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV 583
+ + ++ KNV ++VD+ + G + A I +M E V
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVT-------TALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 584 AWGSLLSACRVHKNLDLGKIAAE 606
W +++ H GK A E
Sbjct: 506 TWNAMIDGYGTH---GFGKAALE 525
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
T L+ + + G + A R+F+ + + V + ML G+ + A++ F M + +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
P Y + +L V A L GK+IH ++SG + L L MY+K +N AR+V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGL 529
F+ + R + VSW +++ +Q+G+ A+++ + M E +KP IT V VL A + L
Sbjct: 193 FDRMPER-DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 530 VEQGQRY--YNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
+ G+ Y M + + ++VD+ + G L+ A + M LE +VV+W S
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNIST---ALVDMYAKCGSLETARQLFDGM-LERNVVSWNS 307
Query: 588 LLSACRVHKNLDLGKIAAEKLL 609
++ A ++N + +K+L
Sbjct: 308 MIDAYVQNENPKEAMLIFQKML 329
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/716 (37%), Positives = 404/716 (56%), Gaps = 69/716 (9%)
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
FD P T+ N +L +Y + RLDLAC +F +P +DSV++ T+I Y + G + +I
Sbjct: 178 FDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+F++M Q P+ FT + VL + L D + G+++H+ V TG S +V N +L+ Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K R+ R FD+M E D V++N +I+
Sbjct: 296 SK-------------------------------HDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
YSQ +EA F ++ F A+ LS ANL L++G+Q+H + D
Sbjct: 325 SYSQAD-QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ VGN+L+ YAK E A+ IF
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAE---------------------------------LIFK 410
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
SL R V+WTA++ GY Q GL+ ++LF M + + T + +L S+S ASL
Sbjct: 411 SLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GKQ+HA +RSG ++ + L+ MY+K G+I A +VF + R VSW ++I A A
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN-AVSWNALISAHA 529
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
+G GE AI F +M+E G++PD ++ +GVLTAC+H G VEQG Y+ M ++ I P
Sbjct: 530 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 589
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+A M+DLLGR G EA ++ MP EPD + W S+L+ACR+HKN L + AAEKL
Sbjct: 590 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Query: 611 IEP-DNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+E ++ AY ++ N+Y++ G+WE +++K+M+ G+KK +SWV++ +K+HVF D
Sbjct: 650 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP D I K+ ++ EI+ G+ PDT+SV+ DV+E +K + L++HSE+LA+AF LIS
Sbjct: 710 QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 769
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
TPE + +MKNLR C DCH+AIK I K+V REI VRD +RFHHF +G+CSC DYW
Sbjct: 770 TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 232 bits (592), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 185/696 (26%), Positives = 314/696 (45%), Gaps = 88/696 (12%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+ V ARIIK G N ++ + +S A+KV+DEMP K S NT++S + K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ--VLPTQFTVTS 150
G + A ++F+ MP+R V+WT ++ Y F A ++F +M + LP T T+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L C +A +VH+F VK G TN L +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFD-----TNPFLTVS-------------------- 187
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
NV++ + RLDLA F+++ E+D VT+N++I GY ++G E++ +F M +
Sbjct: 188 ----NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM-R 242
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S +P FT + L A L LG+Q+HA + T F VGN ++ Y+K
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK----- 297
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
+++E R +FD + + D V++ ++ Y Q
Sbjct: 298 -HDRVLE---------------------------TRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
+ ++ FR M G N+ + MLS++++L+SL G+Q+H AL + S L V
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGI 510
N+L+ MY+K A +F + R TVSWT++I Q GL ++LF +M +
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 511 KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAY 570
+ D T+ VL A + G++ + + ++ S + +VD+ + G +++A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAV 507
Query: 571 NFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IEPDNSGAYSALCNLYSS 628
E MP + + V+W +L+SA + + + A K++ ++PD+ L S
Sbjct: 508 QVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC-SH 565
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
CG E ++M + + K H + D L R+ + + K+ D
Sbjct: 566 CGFVEQGTEYFQAMSPI---------YGITPKKKHYACMLDLL--GRNGRFAEAEKLMD- 613
Query: 689 IKEMGFVPDT---ASVLHDVEEDVKEQMLRHHSEKL 721
EM F PD +SVL+ + + +EKL
Sbjct: 614 --EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/523 (20%), Positives = 209/523 (39%), Gaps = 98/523 (18%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA + G + N +++FY+K + + + +FDEMP S+N ++S+Y+
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+ +++ ++ F EM F +
Sbjct: 328 -------------------------------QADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
+L+ L L G+++H + ++V NSL++MYAK A+ +F + +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
SW ++I+GY Q G L +F M +
Sbjct: 417 TVSW-------------------------------TALISGYVQKGLHGAGLKLFTKM-R 444
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
S+L+ D+ T A+ L A A+ L LGKQ+HA+IIR+ G+ L+ YAK G ++
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
A ++F+ + DR+ V+W A++ + N
Sbjct: 505 ---------------------------------DAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ-IHASALRSGEASSLSV 449
G + A+ F M+ G +P++ ++ +L+ S ++ G + A + G
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
++ + + G A ++ + + + + + W+S++ A H A + E++ +
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
D YV + G E+ + M+ IK P++
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE-RGIKKVPAY 693
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+A +L+++ + +GK +HA II+ G +VF + L++ YAK SI A +VF+EMP
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIR 131
+ SWN ++SA+A G + A F M DSVS ++ + G +
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 132 MFVEM 136
F M
Sbjct: 575 YFQAM 579
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/683 (38%), Positives = 406/683 (59%), Gaps = 43/683 (6%)
Query: 16 YAHLLQSNLKSR-NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
+A LL S +KS+ + + VHA +IK G +F++N L++ Y+K S+ ++VFD+M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P + + +WN++++ K G LD A +F MP RD +W +++ + + R + A+ F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M ++ + +++ SVL++C+ L D++ G +VHS + K+ V + ++L++MY+K G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ V D R+ FD+M +R+VV+WNS+I + Q
Sbjct: 202 N------VNDAQRV-------------------------FDEMGDRNVVSWNSLITCFEQ 230
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATG 313
NG EAL +F ML +S ++PD+ TLAS +SACA+L +K+G+++H +++ +
Sbjct: 231 NGPAVEALDVFQMML-ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ NA + YAK ++ A+ I + I NVIA T+++ GY AR +F +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIR--NVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+R+VV+W A++ GY QNG N++A+ LF + RE P +Y+ + +L + LA L G Q
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 434 IHASALR------SGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
H L+ SGE + V N+LI MY K G + VF + R + VSW +MI+
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMII 466
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIK 547
AQ+G G EA++LF MLE G KPDHIT +GVL+AC H G VE+G+ Y++ M +
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 548 PTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEK 607
P H+ MVDLLGRAG L+EA + IE MP++PD V WGSLL+AC+VH+N+ LGK AEK
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEK 586
Query: 608 LLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGV 667
LL +EP NSG Y L N+Y+ GKWED N+RKSM+ GV K G SW++IQ HVF V
Sbjct: 587 LLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMV 646
Query: 668 EDWLHPQRDAIYNKMAKIWDEIK 690
+D HP++ I++ + + E++
Sbjct: 647 KDKSHPRKKQIHSLLDILIAEMR 669
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 292/782 (37%), Positives = 440/782 (56%), Gaps = 71/782 (9%)
Query: 11 SPLEF--YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+P +F + LL ++ R+ F GK +HA +K + S +L N +N Y+K +SYA+
Sbjct: 4 TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
F + S+N I+ AYAK ++ +A ++F+ +P D+VS+ T+I Y +
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ +F M + FT++ ++A+C DL K++H F V G +V N+ +
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y+K G A +VF GM D++ RD V+WNSM
Sbjct: 182 YYSKGGLLREAVSVFYGM----------------------------DEL--RDEVSWNSM 211
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE 308
I Y Q+ +AL ++ M+ K D FTLAS L+A +L+ L G+Q H +I+
Sbjct: 212 IVAYGQHKEGAKALALYKEMIF-KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 309 FDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRI 368
F VG+ LI Y+K GG DG + + ++
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGC------------------------DG------MYDSEKV 300
Query: 369 FDSLRDRDVVAWTAMLVGYEQNG-LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
F + D+V W M+ GY N L+++AV+ FR M R G +P++ + + S S+L+S
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 428 LDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
KQIH A++S S+ +SV+NALI++Y K+GN+ AR VF+ + VS+ MI
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMI 419
Query: 487 VALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKI 546
AQHG G EA+ L++RML+ GI P+ IT+V VL+AC H G V++GQ Y+N MK KI
Sbjct: 420 KGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKI 479
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+P H++ M+DLLGRAG L+EA FI+ MP +P VAW +LL ACR HKN+ L + AA
Sbjct: 480 EPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
Query: 607 KLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFG 666
+L++++P + Y L N+Y+ KWE+ A++RKSM+ ++K G SW++++ K HVF
Sbjct: 540 ELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFV 599
Query: 667 VEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDT--ASVLHDVEEDVKEQM-LRHHSEKLAI 723
EDW HP + + ++ ++K++G+V D A V D + E+M L HHSEKLA+
Sbjct: 600 AEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAV 659
Query: 724 AFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
AFGL+ST + L ++KNLR+C DCH+AIKF+ + REI+VRD RFH FK G CSC D
Sbjct: 660 AFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGD 719
Query: 784 YW 785
YW
Sbjct: 720 YW 721
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 220/529 (41%), Gaps = 94/529 (17%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E P P ++ Y L+ +R F ++ R+ K G + F + L+ A
Sbjct: 99 EIPQPDTVS-----YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIA--ACC 151
Query: 62 ESISYAKKV--------FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPN-RDSVS 112
+ + K++ FD N ++ Y+K G L A VF M RD VS
Sbjct: 152 DRVDLIKQLHCFSVSGGFDSYSSVN----NAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W ++IV Y + A+ ++ EM+ FT+ SVL + T+L L G++ H ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
K G +V + L++ Y+K G ++D ++
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGG---CDGMYDSEKV------------------------ 300
Query: 233 QFDQMIERDVVTWNSMIAGYSQN-GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
F +++ D+V WN+MI+GYS N EA+ F M + +PD + SAC+NL
Sbjct: 301 -FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNL 358
Query: 292 EKLKLGKQIHAYIIRTEFDATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
KQIH I++ + V NALIS Y K G ++ A+ + ++ + LN ++F
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR--MPELNAVSF- 415
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
M+ GY Q+G +A+ L++ M+ G P
Sbjct: 416 ------------------------------NCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRS----GEASSLSVSNALITMYSKAGNINAA 466
N T A+LS + +D G++ + + EA S +I + +AG + A
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS---CMIDLLGRAGKLEEA 502
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQLFERMLELGIKP 512
R + + ++ +V+W +++ A +H L E A M L P
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/781 (35%), Positives = 450/781 (57%), Gaps = 69/781 (8%)
Query: 8 SLISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISY 66
S ISP ++ + L + KSR G +H I+K G +F++NSL++FYA+
Sbjct: 128 SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC----- 182
Query: 67 AKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRF 126
G LD A +VF+ M R+ VSWT++I Y
Sbjct: 183 --------------------------GELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 127 KNAIRMFVEMVQDQ-VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNS 185
K+A+ +F MV+D+ V P T+ V+++C L DL G+KV++F+ +G+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI--------- 267
Query: 186 LLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTW 245
+V D M++ +V +++ +D+A+ FD+ ++
Sbjct: 268 ------EVNDLMVS----------------ALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 246 NSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYII 305
N+M + Y + G EALG+F N++ DS ++PD+ ++ S +S+C+ L + GK H Y++
Sbjct: 306 NAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
R F++ + NALI Y K + A +I ++ +S V+ + +++ GY++ G++ A
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDR--MSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSS 424
F+++ ++++V+W ++ G Q L ++A+E+F SM +EG + T+ ++ S
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTS 484
L +LD K I+ ++G + + L+ M+S+ G+ +A +FN + R + +WT+
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTA 541
Query: 485 MIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH 544
I A+A G E AI+LF+ M+E G+KPD + +VG LTAC+HGGLV+QG+ + M +H
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIA 604
+ P H+ MVDLLGRAGLL+EA IE+MP+EP+ V W SLL+ACRV N+++ A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 605 AEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHV 664
AEK+ ++ P+ +G+Y L N+Y+S G+W D A +R SMK G++K G S +QI+ K H
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 665 FGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIA 724
F D HP+ I + ++ +G VPD ++VL DV+E K ML HSEKLA+A
Sbjct: 722 FTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMA 781
Query: 725 FGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+GLIS+ + TT+RI+KNLRVC+DCHS KF K+ +REI++RD RFH+ ++G CSC D+
Sbjct: 782 YGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Query: 785 W 785
W
Sbjct: 842 W 842
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 69/379 (18%)
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
+NS+I GY+ +G EA+ +F M+ +S + PDK+T LSACA G QIH I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
++ + V N+L+ YA+ G ++ A+K+ ++ +S NV++
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE--MSERNVVS---------------- 202
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSS 423
WT+M+ GY + KDAV+LF MVR E PN+ T+ ++S +
Sbjct: 203 ---------------WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACA 247
Query: 424 SLASLDHGKQIHASALRSG-EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
L L+ G++++A SG E + L VS AL+ MY K I+ A+R+F+ +
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLC- 305
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT-----------HGGLVE 531
+M + GL EA+ +F M++ G++PD I+ + +++C+ HG ++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 532 QGQRYY--------NMMKNVHK-----------IKPTPSHFASMVDLLGRAGLLQEAYNF 572
G + +M H+ T + S+V G + A+
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 573 IENMPLEPDVVAWGSLLSA 591
E MP E ++V+W +++S
Sbjct: 426 FETMP-EKNIVSWNTIISG 443
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/709 (35%), Positives = 410/709 (57%), Gaps = 12/709 (1%)
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++++Y+ + A V +P+ S++++I + F +I +F M ++P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ ++ C L GK++H +GL V S+ +MY + G A+ VFD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFE 260
M K+V + + ++ + G L+ +M IE ++V+WN +++G++++GY E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALI 320
A+ MF + PD+ T++S L + + E L +G+ IH Y+I+ V +A+I
Sbjct: 236 AVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 321 SCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR----D 376
Y K G V + Q + + G + G + A +F+ +++ +
Sbjct: 295 DMYGKSGHVYGIISLFNQ--FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
VV+WT+++ G QNG + +A+ELFR M G KPN+ T+ +ML ++A+L HG+ H
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
A+R ++ V +ALI MY+K G IN ++ VFN++ + V W S++ + HG +
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN-LVCWNSLMNGFSMHGKAK 471
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
E + +FE ++ +KPD I++ +L+AC GL ++G +Y+ MM + IKP H++ M
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCM 531
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
V+LLGRAG LQEAY+ I+ MP EPD WG+LL++CR+ N+DL +IAAEKL +EP+N
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP 591
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
G Y L N+Y++ G W + +IR M+ +G+KK G SW+Q++N+V+ D HPQ D
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQID 651
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTL 736
I KM +I E+++ G P+ LHDVEE +EQML HSEKLA+ FGL++TP+ T L
Sbjct: 652 QITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPL 711
Query: 737 RIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++KNLR+C DCH+ IKFI REI +RD RFHHFK G+CSC D+W
Sbjct: 712 QVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 222/465 (47%), Gaps = 43/465 (9%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
VGK +H GL + F++ S+ + Y + + A+KVFD M K + + + +L AYA
Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
++G L+ + + M + + VSW I+ +N G K A+ MF ++ P Q
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
TV+SVL S L+ G+ +H +V+K GL V +++++MY K G ++F+
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF 313
Query: 207 RLKNVSSWNVVVSLHIHSGRLDLARAQF----DQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+ N ++ +G +D A F +Q +E +VV+W S+IAG +QNG D EAL
Sbjct: 314 EMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEAL 373
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M + + +KP+ T+ S L AC N+ L G+ H + +R VG+ALI
Sbjct: 374 ELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + ++Q +F+ + +++V W +
Sbjct: 433 YAKCGRINLSQI---------------------------------VFNMMPTKNLVCWNS 459
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRS 441
++ G+ +G K+ + +F S++R KP+ + +++LS + D G K +
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
G L + ++ + +AG + A + + + ++ W +++
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 277/758 (36%), Positives = 429/758 (56%), Gaps = 71/758 (9%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKT---ESISYAKKVFDEMPVKTLCSWNTILSAY 89
+++HA++IK GLH + + + L+ F + E + YA VF + L WNT+ +
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
A + D VS A++++V M+ +LP +T
Sbjct: 110 AL---------------SSDPVS----------------ALKLYVCMISLGLLPNSYTFP 138
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL SC G+++H V+K G + V SL++MY + G A VFD +
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
+V S+ ++ + G ++ A+ FD++ +DVV+WN+MI+GY++ G EAL +F +M+
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
K ++++PD+ T+ + +SACA ++LG+Q+H +I F + + NALI
Sbjct: 259 K-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI--------- 308
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
D Y K G++ A +F+ L +DV++W ++ GY
Sbjct: 309 ------------------------DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALR--SGEASSL 447
L K+A+ LF+ M+R G PN+ T+ ++L + L ++D G+ IH + G ++
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
S+ +LI MY+K G+I AA +VFN I + SW +MI A HG + + LF RM +
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+GI+PD IT+VG+L+AC+H G+++ G+ + M +K+ P H+ M+DLLG +GL +
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA I M +EPD V W SLL AC++H N++LG+ AE L+ IEP+N G+Y L N+Y+
Sbjct: 524 EAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYA 583
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G+W + A R + G+KK G S ++I + VH F + D HP+ IY + ++
Sbjct: 584 SAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 643
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+++ GFVPDT+ VL ++EE+ KE LRHHSEKLAIAFGLIST T L I+KNLRVC +
Sbjct: 644 LLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 703
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH A K I K+ REI+ RD TRFHHF+ G+CSC DYW
Sbjct: 704 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 236/501 (47%), Gaps = 70/501 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
+ +L+S KS+ G+ +H ++K G L +++ SL++ Y + + A KVFD+ P
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
+ + S+ ++ YA +G ++ A ++F+ +P +D VSW +I Y E G +K A+ +F +
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ V P + T+ +V+++C G + G++VH ++ G + + N+L+++Y+K G+
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
A +F+ + K+V SW N++I GY+
Sbjct: 317 LETACGLFERLPYKDVISW-------------------------------NTLIGGYTHM 345
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDAT--G 313
EAL +F ML+ S P+ T+ S L ACA+L + +G+ IH YI + T
Sbjct: 346 NLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ +LI YAK G DI A ++F+S+
Sbjct: 405 SLRTSLIDMYAKCG---------------------------------DIEAAHQVFNSIL 431
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
+ + +W AM+ G+ +G + +LF M + G +P++ T +LS S LD G+
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 434 IHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
I + + + + L +I + +G A + N++ + V W S++ A H
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551
Query: 493 GLGEEAIQLFERMLELGIKPD 513
G E E +++ I+P+
Sbjct: 552 GNVELGESFAENLIK--IEPE 570
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIK--CGLHLSVFLKNSLMNFYA 59
ETPN +++S L AHL + +G+ +H I K G+ + L+ SL++ YA
Sbjct: 363 ETPNDVTMLSILPACAHLGAID-------IGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 415
Query: 60 KTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP----NRDSVSWTT 115
K I A +VF+ + K+L SWN ++ +A GR D + ++F+ M D +++
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQD 139
++ + G +F M QD
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQD 499
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/703 (36%), Positives = 407/703 (57%), Gaps = 38/703 (5%)
Query: 86 LSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQVLPT 144
++A + L+ A +VF+ +P +S +W T+I Y +I F++MV + Q P
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
++T ++ + + LS G+ +H VK+ + V V NSL++ Y GD
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD--------- 181
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
LD A F + E+DVV+WNSMI G+ Q G +AL +
Sbjct: 182 ----------------------LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M + +K T+ LSACA + L+ G+Q+ +YI + + NA++ Y
Sbjct: 220 FKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K G +E A+++ + + + + +TT+LDGY D AR + +S+ +D+VAW A++
Sbjct: 279 KCGSIEDAKRLFD--AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 385 VGYEQNGLNKDAVELFRSM-VREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
YEQNG +A+ +F + +++ K N TL + LS + + +L+ G+ IH+ + G
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V++ALI MYSK G++ +R VFN + +++ W++MI LA HG G EA+ +F
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M E +KP+ +T+ V AC+H GLV++ + ++ M++ + I P H+A +VD+LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L++A FIE MP+ P WG+LL AC++H NL+L ++A +LL +EP N GA+ L
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+ GKWE+ + +RK M+ G+KK G S ++I +H F D HP + +Y K+
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 684 KIWDEIKEMGFVPDTASVLHDV-EEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++ +++K G+ P+ + VL + EE++KEQ L HSEKLAI +GLIST +R++KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
RVC DCHS K I +L DREI+VRD RFHHF+ G CSC D+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 205/432 (47%), Gaps = 34/432 (7%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N+++ Y G LD AC+VF + +D VSW ++I + + G A+ +F +M + V
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ T+ VL++C + +L G++V S++ + ++ + + N++L+MY K G AK +
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD M K+ +W ++ + S + AR + M ++D+V WN++I+ Y QNG EAL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F + ++K ++ TL STLSACA + L+LG+ IH+YI + V +ALI
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
Y+K GD+ +R +F+S+ RDV W+A
Sbjct: 410 YSKC---------------------------------GDLEKSREVFNSVEKRDVFVWSA 436
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI-HASALRS 441
M+ G +G +AV++F M KPN T + + S +D + + H
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G ++ + ++G + A + + T W +++ A H A
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 502 FERMLELGIKPD 513
R+LEL + D
Sbjct: 557 CTRLLELEPRND 568
Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 143/273 (52%), Gaps = 33/273 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + K RN G+ V + I + +++++ L N++++ Y K SI AK++FD M K
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-V 137
+W T+L YA + A EV N MP +D V+W +I Y + G+ A+ +F E+ +
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
Q + Q T+ S L++C +G L G+ +HS++ K G+ +VT++L++MY+K GD
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
++ VF+ + +RDV W++MI G + +G
Sbjct: 418 KSREVFNSVE-------------------------------KRDVFVWSAMIGGLAMHGC 446
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
EA+ MF M +++++KP+ T + AC++
Sbjct: 447 GNEAVDMFYKM-QEANVKPNGVTFTNVFCACSH 478
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/716 (36%), Positives = 410/716 (57%), Gaps = 78/716 (10%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+++ Y K G+L + + RD V+W T++ + + + A+ EMV + V
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +FT++SVL +C+ L L GK++H++ +K G L V ++L++MY + +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
VFDGM FD R + WN+MIAGYSQN +D EA
Sbjct: 360 VFDGM---------------------------FD----RKIGLWNAMIAGYSQNEHDKEA 388
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + + L + T+A + AC + IH ++++ D V N L+
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y+++G ++IA RIF + DRD+V W
Sbjct: 449 MYSRLGKIDIAM---------------------------------RIFGKMEDRDLVTWN 475
Query: 382 AMLVGYEQNGLNKDAVELFRSM------VREGP-----KPNNYTLSAMLSVSSSLASLDH 430
M+ GY + ++DA+ L M V +G KPN+ TL +L ++L++L
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
GK+IHA A+++ A+ ++V +AL+ MY+K G + +R+VF+ I ++ ++W +I+A
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 594
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG G+EAI L M+ G+KP+ +T++ V AC+H G+V++G R + +MK + ++P+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVV-AWGSLLSACRVHKNLDLGKIAAEKLL 609
H+A +VDLLGRAG ++EAY + MP + + AW SLL A R+H NL++G+IAA+ L+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
+EP+ + Y L N+YSS G W+ A +R++MK GV+K G SW++ ++VH F D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HPQ + + + +W+ +++ G+VPDT+ VLH+VEED KE +L HSEKLAIAFG+++
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILN 834
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T T +R+ KNLRVCNDCH A KFI K+VDREI++RD RFH FK G CSC DYW
Sbjct: 835 TSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 153/609 (25%), Positives = 277/609 (45%), Gaps = 93/609 (15%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
SP E++ LL+S ++S L + +I G+ + +L+ A + + K++
Sbjct: 61 SP-EWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 71 FDEM-----PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGR 125
+ V ++ NT+++ Y K G +VF+ + R+ VSW ++I + +
Sbjct: 120 HAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEK 179
Query: 126 FKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALG---DLSAGKKVHSFVVKTGLSGCVNV 182
++ A+ F M+ + V P+ FT+ SV+ +C+ L L GK+VH++ ++ G +
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-I 238
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV 242
N+L+ MY K+G +K V L GR D+
Sbjct: 239 INTLVAMYGKLGKLASSK-----------------VLLGSFGGR--------------DL 267
Query: 243 VTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHA 302
VTWN++++ QN EAL M+ + ++PD+FT++S L AC++LE L+ GK++HA
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 303 YIIRT-EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
Y ++ D VG+AL+ D Y
Sbjct: 327 YALKNGSLDENSFVGSALV---------------------------------DMYCNCKQ 353
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLS 420
+ RR+FD + DR + W AM+ GY QN +K+A+ LF M G N+ T++ ++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ + IH ++ G V N L+ MYS+ G I+ A R+F + R + V
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLV 472
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLEL-----------GIKPDHITYVGVLTACTHGGL 529
+W +MI E+A+ L +M L +KP+ IT + +L +C
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 530 VEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
+ +G+ + +KN + + +++VD+ + G LQ + + +P + +V+ W +
Sbjct: 533 LAKGKEIHAYAIKN--NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVI 589
Query: 589 LSACRVHKN 597
+ A +H N
Sbjct: 590 IMAYGMHGN 598
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 27/284 (9%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
+H ++K GL F++N+LM+ Y++ I A ++F +M + L +WNT+++ Y
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 95 LDLACEVFNLMPNRD-SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLA 153
+ A + + M N + VS K A R+ ++ P T+ ++L
Sbjct: 487 HEDALLLLHKMQNLERKVS--------------KGASRVSLK-------PNSITLMTILP 525
Query: 154 SCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS 213
SC AL L+ GK++H++ +K L+ V V ++L++MYAK G M++ VFD + KNV +
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 214 WNVVVSLHIHSGR----LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
WNV++ + G +DL R Q ++ + VT+ S+ A S +G E L +F M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
D ++P A + ++K Q+ + R +F+ G
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR-DFNKAG 688
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 15/261 (5%)
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ A IF S + R W +L ++ L ++AV + M+ G KP+NY A+L
Sbjct: 48 VSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 422 SSSLASLDHGKQIHASALRSGEA-SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ L ++ GKQIHA + G S++V+N L+ +Y K G+ A +VF+ I R + V
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQ-V 165
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMM 540
SW S+I +L E A++ F ML+ ++P T V V+TAC++ + E M
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG----LMMG 221
Query: 541 KNVHKIKPTPSHFAS-----MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA-CRV 594
K VH S +V + G+ G L + + + D+V W ++LS+ C+
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQN 280
Query: 595 HKNLDLGKIAAEKLLL-IEPD 614
+ L+ + E +L +EPD
Sbjct: 281 EQLLEALEYLREMVLEGVEPD 301
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA IK L V + ++L++ YAK + ++KVFD++P K + +WN I+ AY
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
G A ++ +M PN V++ ++ + G +R+F M D
Sbjct: 596 HGNGQEAIDLLRMMMVQGVKPNE--VTFISVFAACSHSGMVDEGLRIFYVMKPD 647
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/713 (36%), Positives = 410/713 (57%), Gaps = 70/713 (9%)
Query: 79 LCSWNTILSAYAK-QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+C +++ + K + + A +VF+ M + V+WT +I ++G + AIR F++MV
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+FT++SV ++C L +LS GK++HS+ +++GL +V SL++MYAK +
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSAD- 318
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN-G 256
G +D R FD+M + V++W ++I GY +N
Sbjct: 319 ---------------------------GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
EA+ +F+ M+ ++P+ FT +S AC NL ++GKQ+ + + V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRD 376
N++IS + K +E AQ R F+SL +++
Sbjct: 412 NSVISMFVKSDRMEDAQ---------------------------------RAFESLSEKN 438
Query: 377 VVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
+V++ L G +N + A +L + + +T +++LS +++ S+ G+QIH+
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 437 SALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGE 496
++ G + + V NALI+MYSK G+I+ A RVFN + R +SWTSMI A+HG
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN-VISWTSMITGFAKHGFAI 557
Query: 497 EAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASM 556
++ F +M+E G+KP+ +TYV +L+AC+H GLV +G R++N M HKIKP H+A M
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 557 VDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNS 616
VDLL RAGLL +A+ FI MP + DV+ W + L ACRVH N +LGK+AA K+L ++P+
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 617 GAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRD 676
AY L N+Y+ GKWE++ +R+ MK + K G SW+++ +K+H F V D HP
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 677 AIYNKMAKIWDEIKEMGFVPDTASVLHDV----EEDVKEQMLRHHSEKLAIAFGLISTPE 732
IY+++ ++ EIK G+VPDT VLH + +E KE++L HSEK+A+AFGLIST +
Sbjct: 738 QIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK 797
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ +R+ KNLRVC DCH+A+K+I + REIV+RD RFHHFK G CSC DYW
Sbjct: 798 SRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 159/595 (26%), Positives = 277/595 (46%), Gaps = 107/595 (17%)
Query: 10 ISPLE--FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
I P++ ++ LL+S +++R+ +GKLVHAR+I+ + L NSL++ Y+K+ + A
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+ VF E RD VSW+ ++ Y GR
Sbjct: 117 EDVF----------------------------ETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 128 NAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTG-LSGCVNVTNSL 186
+AI++FVE ++ ++P + T+V+ +C+ + G+ F++KTG V V SL
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 187 LNMYAKVGDEMMAKA--VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVT 244
++M+ K G+ A VFD M E +VVT
Sbjct: 209 IDMFVK-GENSFENAYKVFDKMS-------------------------------ELNVVT 236
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
W MI Q G+ EA+ F +M+ S + DKFTL+S SACA LE L LGKQ+H++
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 305 IRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGP 364
IR+ V +L+ YAK DG +
Sbjct: 296 IRSGL--VDDVECSLVDMYAKCSA-------------------------DG-----SVDD 323
Query: 365 ARRIFDSLRDRDVVAWTAMLVGYEQN-GLNKDAVELFRSMVREGP-KPNNYTLSAMLSVS 422
R++FD + D V++WTA++ GY +N L +A+ LF M+ +G +PN++T S+
Sbjct: 324 CRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 423 SSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSW 482
+L+ GKQ+ A + G AS+ SV+N++I+M+ K+ + A+R F + + VS+
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSY 442
Query: 483 TSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKN 542
+ + ++ E+A +L + E + T+ +L+ + G + +G++ ++ +
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 543 VHKI--KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ +P + SM G +NF+EN +V++W S+++ H
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKH 553
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 227/487 (46%), Gaps = 76/487 (15%)
Query: 116 IIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ-FTVTSVLASCTALGDLSAGKKVHSFVVKT 174
+I+ + G + A+ M +D + P T +S+L SC D GK VH+ +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 175 GLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQF 234
+ + NSL+++Y+K GD A+ VF+ MR
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR--------------------------- 124
Query: 235 DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKL 294
+ +RDVV+W++M+A Y NG + +A+ +F L + L P+ + + + AC+N + +
Sbjct: 125 -RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDFV 182
Query: 295 KLGKQIHAYIIRT-EFDATGPVGNALISCYAK-VGGVEIAQKIVEQSGISYLNVIAFTTL 352
+G+ ++++T F++ VG +LI + K E A K+ ++ +S LNV
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK--MSELNV------ 234
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
V WT M+ Q G ++A+ F MV G + +
Sbjct: 235 -------------------------VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKA---GNINAARRV 469
+TLS++ S + L +L GKQ+H+ A+RSG + S L+ MY+K G+++ R+V
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKV 327
Query: 470 FNLIHWRQETVSWTSMIVALAQH-GLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHG 527
F+ + +SWT++I ++ L EAI LF M+ G ++P+H T+ AC +
Sbjct: 328 FDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
G++ + S S++ + ++ +++A E++ E ++V++ +
Sbjct: 387 SDPRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNT 444
Query: 588 LLSA-CR 593
L CR
Sbjct: 445 FLDGTCR 451
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 48/376 (12%)
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
M +D D T +S L +C +LGK +HA +I + + + N+LIS Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR---DRDVVAWTAML 384
D A +F+++R RDVV+W+AM+
Sbjct: 112 ---------------------------------DSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE- 443
Y NG DA+++F + G PN+Y +A++ S+ + G+ +++G
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 444 ASSLSVSNALITMYSKAGN-INAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S + V +LI M+ K N A +VF+ + V+WT MI Q G EAI+ F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
M+ G + D T V +AC + G++ ++ + M
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSA 317
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL----IEPDNSGA 618
G + + + M + V++W +L++ + NL I ++ +EP++
Sbjct: 318 DGSVDDCRKVFDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 619 YSALCNLYSSCGKWED 634
SA + +CG D
Sbjct: 377 SSA----FKACGNLSD 388
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 35/253 (13%)
Query: 28 NPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILS 87
+P VGK V + K GL + + NS+++ + K++ + A++ F+ + K L S+NT
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF-- 445
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
LD C N F+ A ++ E+ + ++ + FT
Sbjct: 446 -------LDGTCRNLN----------------------FEQAFKLLSEITERELGVSAFT 476
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
S+L+ +G + G+++HS VVK GLS V N+L++MY+K G A VF+ M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALG 263
+NV SW +++ G F+QMIE V VT+ ++++ S G E
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 264 MFANMLKDSSLKP 276
F +M +D +KP
Sbjct: 597 HFNSMYEDHKIKP 609
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 28/145 (19%)
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL--IE 612
S +DL+ R G+ P+ D V + SLL +C ++ LGK+ +L+ IE
Sbjct: 47 SALDLMARDGI----------RPM--DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE 94
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
PD S Y++L +LYS G A ++ ++M+ G K SW + G E
Sbjct: 95 PD-SVLYNSLISLYSKSGDSAKAEDVFETMRRFG--KRDVVSWSAMMACYGNNGRE---- 147
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPD 697
DAI K++ E E+G VP+
Sbjct: 148 --LDAI-----KVFVEFLELGLVPN 165
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/637 (39%), Positives = 381/637 (59%), Gaps = 67/637 (10%)
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
++L CT L G+ VH+ ++++ + + N+LLNMYAK G
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS------------- 110
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANM 268
L+ AR F++M +RD VTW ++I+GYSQ+ +AL F M
Sbjct: 111 ------------------LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 269 LKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGG 328
L+ P++FTL+S + A A + G Q+H + ++ FD+ VG+AL
Sbjct: 153 LR-FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSAL--------- 202
Query: 329 VEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYE 388
LD Y + G + A+ +FD+L R+ V+W A++ G+
Sbjct: 203 ------------------------LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 389 QNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLS 448
+ + A+ELF+ M+R+G +P++++ +++ SS L+ GK +HA ++SGE
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 449 VSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
N L+ MY+K+G+I+ AR++F+ + +++ VSW S++ A AQHG G+EA+ FE M +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
GI+P+ I+++ VLTAC+H GL+++G YY +MK I P H+ ++VDLLGRAG L
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 569 AYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSS 628
A FIE MP+EP W +LL+ACR+HKN +LG AAE + ++PD+ G + L N+Y+S
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 629 CGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDE 688
G+W DAA +RK MK GVKK SWV+I+N +H+F D HPQR+ I K ++ +
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 536
Query: 689 IKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDC 748
IKE+G+VPDT+ V+ V++ +E L++HSEK+A+AF L++TP +T+ I KN+RVC DC
Sbjct: 537 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 596
Query: 749 HSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
H+AIK K+V REI+VRD RFHHFK G CSC+DYW
Sbjct: 597 HTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 196/431 (45%), Gaps = 67/431 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
NT+L+ YAK G L+ A +VF MP RD V+WTT+I Y++ R +A+ F +M++
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P +FT++SV+ + A G ++H F VK G V+V ++LL++Y + G A+ V
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
FD + +N SW N++IAG+++ +AL
Sbjct: 219 FDALESRNDVSW-------------------------------NALIAGHARRSGTEKAL 247
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ML+D +P F+ AS AC++ L+ GK +HAY+I++ GN L+
Sbjct: 248 ELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G + A+KI FD L RDVV+W +
Sbjct: 307 YAKSGSIHDARKI---------------------------------FDRLAKRDVVSWNS 333
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
+L Y Q+G K+AV F M R G +PN + ++L+ S LD G + + G
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG 393
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
++ + +AG++N A R + W +++ A H E
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 503 ERMLELGIKPD 513
E + EL PD
Sbjct: 454 EHVFEL--DPD 462
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 171/331 (51%), Gaps = 38/331 (11%)
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAK 325
+N L+ S + D+ + L C + L G+ +HA+I+++ F +GN L++ YAK
Sbjct: 48 SNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK 107
Query: 326 VGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLV 385
G +E A+K+ E+ + RD V WT ++
Sbjct: 108 CGSLEEARKVFEK---------------------------------MPQRDFVTWTTLIS 134
Query: 386 GYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS 445
GY Q+ DA+ F M+R G PN +TLS+++ +++ G Q+H ++ G S
Sbjct: 135 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 194
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM 505
++ V +AL+ +Y++ G ++ A+ VF+ + R + VSW ++I A+ E+A++LF+ M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWNALIAGHARRSGTEKALELFQGM 253
Query: 506 LELGIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAG 564
L G +P H +Y + AC+ G +EQG+ + M+K+ K+ + +++D+ ++G
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSG 311
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
+ +A + + + DVV+W SLL+A H
Sbjct: 312 SIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 64/281 (22%)
Query: 11 SPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKK 69
SP EF + ++++ R G +H +KCG +V + ++L++ Y + + A+
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 70 VFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNA 129
VFD + + SWN +++ +A++ + A E+F
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQ-------------------------- 251
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
M++D P+ F+ S+ +C++ G L GK VH++++K+G N+LL+M
Sbjct: 252 -----GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YAK G A+ +FD + ++V SW NS++
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSW-------------------------------NSLL 335
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
Y+Q+G+ EA+ F M + ++P++ + S L+AC++
Sbjct: 336 TAYAQHGFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSH 375
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK VHA +IK G L F N+L++ YAK+ SI A+K+FD + + + SWN++L+AYA+
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 92 QGRLDLACEVFNLM------PNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQ 145
G A F M PN +S+ +++ + G + M +D ++P
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPN--EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+ +V+ GDL+ + F+ + + + +LLN
Sbjct: 399 WHYVTVVDLLGRAGDLNRALR---FIEEMPIEPTAAIWKALLN 438
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 276/768 (35%), Positives = 428/768 (55%), Gaps = 99/768 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L + +K + +G+ VH +K GL L + + NSL+N Y K +A+ V
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV-------- 372
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
F+ M RD +SW ++I + G A+ +F+++++
Sbjct: 373 -----------------------FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 139 DQVLPTQFTVTSVLASCTALGD-LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
+ P Q+T+TSVL + ++L + LS K+VH +K V+ +L++ Y++
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
A+ +F+ R FD +V WN+M+AGY+Q+
Sbjct: 470 EAEILFE--------------------------RHNFD------LVAWNAMMAGYTQSHD 497
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+ L +FA M K + D FTLA+ C L + GKQ+HAY I++ +D
Sbjct: 498 GHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD------- 549
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
L++ + +LD Y+K GD+ A+ FDS+ D
Sbjct: 550 --------------------------LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
VAWT M+ G +NG + A +F M G P+ +T++ + SS L +L+ G+QIHA+
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
AL+ + V +L+ MY+K G+I+ A +F I T +W +M+V LAQHG G+E
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT-AWNAMLVGLAQHGEGKE 702
Query: 498 AIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMV 557
+QLF++M LGIKPD +T++GVL+AC+H GLV + ++ M + IKP H++ +
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 558 DLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG 617
D LGRAGL+++A N IE+M +E + +LL+ACRV + + GK A KLL +EP +S
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 618 AYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDA 677
AY L N+Y++ KW++ R MK VKK GFSW++++NK+H+F V+D + Q +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 678 IYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLR 737
IY K+ + +IK+ G+VP+T L DVEE+ KE+ L +HSEKLA+AFGL+STP +T +R
Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 738 IMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
++KNLRVC DCH+A+K+I K+ +REIV+RDA RFH FK G+CSC DYW
Sbjct: 943 VIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 176/641 (27%), Positives = 296/641 (46%), Gaps = 118/641 (18%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L+ L S + + H K GL F+ +L+N Y K + K +F+EMP +
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 79 LCSWNTILSAYAKQG----RLDLACEVFN--LMPNR------------------------ 108
+ WN +L AY + G +DL+ + L PN
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFAN 270
Query: 109 --DSVSWTTIIV------TYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGD 160
D+ S + II Y G++ ++ F +MV+ V Q T +LA+ +
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 161 LSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSL 220
L+ G++VH +K GL + V+NSL+NMY K+
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR-------------------------- 364
Query: 221 HIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
+ AR FD M ERD+++WNS+IAG +QNG + EA+ +F +L+ LKPD++T
Sbjct: 365 -----KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CGLKPDQYT 418
Query: 281 LASTLSACANL-EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQS 339
+ S L A ++L E L L KQ+H + I+ + V ALI Y++ ++ A+ + E+
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478
Query: 340 GISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVEL 399
D+VAW AM+ GY Q+ ++L
Sbjct: 479 NF----------------------------------DLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 400 FRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
F M ++G + +++TL+ + L +++ GKQ+HA A++SG L VS+ ++ MY K
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVK 564
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
G+++AA+ F+ I + V+WT+MI ++G E A +F +M +G+ PD T
Sbjct: 565 CGDMSAAQFAFDSIP-VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 520 VLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF--ASMVDLLGRAGLLQEAYNFIENMP 577
+ A + +EQG++ + N K+ T F S+VD+ + G + +AY + +
Sbjct: 624 LAKASSCLTALEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 578 LEPDVVAWGSLLSACRVH----KNLDLGKIAAEKLLLIEPD 614
+ ++ AW ++L H + L L K K L I+PD
Sbjct: 681 M-MNITAWNAMLVGLAQHGEGKETLQLFK--QMKSLGIKPD 718
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/614 (25%), Positives = 287/614 (46%), Gaps = 105/614 (17%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
L++ + S + +GK HARI+ + FL N+L++ Y+K S++YA++VFD+MP +
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
L SWN+IL+AYA+ C V N+ + A +F + Q
Sbjct: 105 LVSWNSILAAYAQSSE----CVVENI----------------------QQAFLLFRILRQ 138
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
D V ++ T++ +L C G + A + H + K GL G V +L+N+Y K G
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSG----RLDLARAQFD----------QMIER---- 240
K +F+ M ++V WN+++ ++ G +DL+ A +++ R
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD 258
Query: 241 --------------------DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFT 280
+++ N ++ Y +G L FA+M+ +S ++ D+ T
Sbjct: 259 DSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVECDQVT 317
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L+ ++ L LG+Q+H ++ D V N+LI+ Y
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC---------------- 361
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
K+ G AR +FD++ +RD+++W +++ G QNGL +AV LF
Sbjct: 362 -----------------KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 401 RSMVREGPKPNNYTLSAMLSVSSSLAS-LDHGKQIHASALRSGEASSLSVSNALITMYSK 459
++R G KP+ YT++++L +SSL L KQ+H A++ S VS ALI YS+
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
+ A +F ++ + V+W +M+ Q G + ++LF M + G + D T
Sbjct: 465 NRCMKEAEILFERHNF--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 520 VLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPL 578
V C + QG++ + +K+ + + S + ++D+ + G + A +++P+
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 579 EPDVVAWGSLLSAC 592
PD VAW +++S C
Sbjct: 581 -PDDVAWTTMISGC 593
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/762 (35%), Positives = 409/762 (53%), Gaps = 105/762 (13%)
Query: 27 RNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTIL 86
R G +H +K G V++ SL++ Y++ +++ A+ +FDEMPV
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV---------- 213
Query: 87 SAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQ 145
RD SW +I Y + G K A+ + + D V
Sbjct: 214 ---------------------RDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV---- 248
Query: 146 FTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDG 205
TV S+L++CT GD + G +HS+ +K GL + V+N L+++YA+ G
Sbjct: 249 -TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG----------- 296
Query: 206 MRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMF 265
RL + FD+M RD+++WNS+I Y N A+ +F
Sbjct: 297 --------------------RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 336
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTE-FDATGPVGNALISCYA 324
M + S ++PD TL S S + L ++ + + + +R F +GNA++ YA
Sbjct: 337 QEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
K+G V+ AR +F+ L + DV++W ++
Sbjct: 396 KLGLVD---------------------------------SARAVFNWLPNTDVISWNTII 422
Query: 385 VGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
GY QNG +A+E++ M EG N T ++L S +L G ++H L++G
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
+ V +L MY K G + A +F I R +V W ++I HG GE+A+ LF+
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
ML+ G+KPDHIT+V +L+AC+H GLV++GQ + MM+ + I P+ H+ MVD+ GRA
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALC 623
G L+ A FI++M L+PD WG+LLSACRVH N+DLGKIA+E L +EP++ G + L
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 624 NLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMA 683
N+Y+S GKWE IR G++KT G+S +++ NKV VF + HP + +Y ++
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 684 KIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLR 743
+ ++K +G+VPD VL DVE+D KE +L HSE+LAIAF LI+TP TT+RI KNLR
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 781
Query: 744 VCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
VC DCHS KFI K+ +REI+VRD+ RFHHFK G+CSC DYW
Sbjct: 782 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/608 (25%), Positives = 263/608 (43%), Gaps = 117/608 (19%)
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMF-V 134
++ +C +++ Y G + LA F+ + NRD +W +I Y G IR F +
Sbjct: 83 IQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL 142
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M+ + P T SVL +C + D G K+H +K G V V SL+++Y++
Sbjct: 143 FMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ +FD M ++++ SW N+MI+GY Q
Sbjct: 200 AVGNARILFDEMPVRDMGSW-------------------------------NAMISGYCQ 228
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
+G EAL + +N L+ D T+ S LSAC G IH+Y I+ ++
Sbjct: 229 SGNAKEALTL-SNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V N LI YA+ G + QK +FD +
Sbjct: 284 VSNKLIDLYAEFGRLRDCQK---------------------------------VFDRMYV 310
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
RD+++W +++ YE N A+ LF+ M +P+ TL ++ S+ S L + + +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 435 HASALRSGE-ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG 493
LR G +++ NA++ MY+K G +++AR VFN + + +SW ++I AQ+G
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNG 429
Query: 494 LGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPS 551
EAI+++ M E G I + T+V VL AC+ G + QG + + ++KN +
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVF 487
Query: 552 HFASMVDLLGRAGLLQEAYNFIENMP---------------------------------- 577
S+ D+ G+ G L++A + +P
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 578 LEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL---IEPDNSGAYSALCNLYSSCGKWED 634
++PD + + +LLSAC +D G+ E + I P + Y + ++Y G+ E
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP-SLKHYGCMVDMYGRAGQLET 606
Query: 635 AANIRKSM 642
A KSM
Sbjct: 607 ALKFIKSM 614
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 427 SLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMI 486
+L K +HA + S + ++ +S L+ +Y GN+ AR F+ I R + +W MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR-DVYAWNLMI 124
Query: 487 VALAQHGLGEEAIQLFER-MLELGIKPDHITYVGVLTAC---THGGLVEQGQRYYNMMKN 542
+ G E I+ F ML G+ PD+ T+ VL AC G + + M +
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWD 184
Query: 543 VHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
V+ AS++ L R + A + MP+ D+ +W +++S
Sbjct: 185 VYVA-------ASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISG 225
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/771 (34%), Positives = 417/771 (54%), Gaps = 99/771 (12%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
FYA L+ S K +HAR++ GL S FL L++ + I++A++VFD++
Sbjct: 23 FYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
P W II Y+ F++A+ M+
Sbjct: 80 -------------------------------PRPQIFPWNAIIRGYSRNNHFQDALLMYS 108
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
M +V P FT +L +C+ L L G+ VH+ V + G V V N L+ +YAK
Sbjct: 109 NMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR 168
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
A+ VF+G+ L ER +V+W ++++ Y+Q
Sbjct: 169 RLGSARTVFEGLPLP-----------------------------ERTIVSWTAIVSAYAQ 199
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG EAL +F+ M K +KPD L S L+A L+ LK G+ IHA +++
Sbjct: 200 NGEPMEALEIFSQMRK-MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM------- 251
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
G+EI ++ I+ T+ Y K G + A+ +FD ++
Sbjct: 252 -------------GLEIEPDLL----------ISLNTM---YAKCGQVATAKILFDKMKS 285
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+++ W AM+ GY +NG ++A+++F M+ + +P+ ++++ +S + + SL+ + +
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+ RS + +S+ALI M++K G++ AR VF+ R + V W++MIV HG
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGR 404
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EAI L+ M G+ P+ +T++G+L AC H G+V +G ++N M + HKI P H+A
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYA 463
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
++DLLGRAG L +AY I+ MP++P V WG+LLSAC+ H++++LG+ AA++L I+P
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+G Y L NLY++ W+ A +R MK G+ K G SWV+++ ++ F V D HP+
Sbjct: 524 NTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPR 583
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
+ I ++ I +KE GFV + + LHD+ ++ E+ L HSE++AIA+GLISTP+ T
Sbjct: 584 YEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGT 643
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRI KNLR C +CH+A K I KLVDREIVVRD RFHHFK G+CSC DYW
Sbjct: 644 PLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/798 (33%), Positives = 435/798 (54%), Gaps = 75/798 (9%)
Query: 30 FVGKLVHARIIKCGLHLS-VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSA 88
F+G +H +IK GL S + ++ M FY + S+ +A K+FDEM
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEM-------------- 49
Query: 89 YAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTV 148
P RD ++W I++ G ++ A+ +F EM T+
Sbjct: 50 -----------------PKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 149 TSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRL 208
+L C+ + G+++H +V++ GL V++ NSL+ MY++ G +++ VF+ M+
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 209 KNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVTWNSMIAGYSQNGYDFEALGM 264
+N+SSWN ++S + G +D A D+M ++ D+VTWNS+++GY+ G +A+ +
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
M + + LKP +++S L A A LKLGK IH YI+R + V LI Y
Sbjct: 213 LKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 325 KVGGVEIAQKIVEQ-------------SGISYL--------------------NVIAFTT 351
K G + A+ + + SG+SY + I + +
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 352 LLDGYIKIGDIGPARRIFDSLRDR----DVVAWTAMLVGYEQNGLNKDAVELFRSMVREG 407
L GY +G A + ++++ +VV+WTA+ G +NG ++A+++F M EG
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 408 PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAAR 467
PN T+S +L + L+ L GK++H LR V+ AL+ MY K+G++ +A
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 468 RVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHG 527
+F I + SW M++ A G GEE I F MLE G++PD IT+ VL+ C +
Sbjct: 452 EIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 528 GLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGS 587
GLV++G +Y+++M++ + I PT H + MVDLLGR+G L EA++FI+ M L+PD WG+
Sbjct: 511 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGA 570
Query: 588 LLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGV 647
LS+C++H++L+L +IA ++L ++EP NS Y + NLYS+ +WED IR M+ V
Sbjct: 571 FLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV 630
Query: 648 KKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEE 707
+ +SW+QI VH+F E HP IY ++ K+ E+K+ G+VPDT+ + D+ +
Sbjct: 631 RVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISD 690
Query: 708 DVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRD 767
KE++L H+EKLA+ +GLI +R++KN +C+D H+ K++ L +REIV+++
Sbjct: 691 SEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQE 750
Query: 768 ATRFHHFKKGLCSCRDYW 785
R HHF+ G CSC D W
Sbjct: 751 GARVHHFRDGKCSCNDSW 768
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 143/313 (45%), Gaps = 71/313 (22%)
Query: 17 AHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPV 76
+ LLQ+ + + +GK +H I++ L V+++ +L++ Y KT + YA+ VFD M
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 77 KTLCSWNTIL-----------------------------------SAYAKQGRLDLACEV 101
K + +WN+++ S YA G+ + A +V
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 102 FNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTA 157
M + + VSWT I ++ G F+NA+++F++M ++ V P T++++L
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Query: 158 LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVV 217
L L +GK+VH F ++ L V +L++MY K GD A +F G++ K+++SWN
Sbjct: 409 LSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC- 467
Query: 218 VSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
M+ GY+ G E + F+ ML ++ ++PD
Sbjct: 468 ------------------------------MLMGYAMFGRGEEGIAAFSVML-EAGMEPD 496
Query: 278 KFTLASTLSACAN 290
T S LS C N
Sbjct: 497 AITFTSVLSVCKN 509
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/713 (35%), Positives = 395/713 (55%), Gaps = 69/713 (9%)
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
CS + +L R +L + D SW ++I G A+ F M +
Sbjct: 10 FCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK 69
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
+ PT+ + + +C++L D+ +GK+ H G + V+++L+ MY+ G
Sbjct: 70 LSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG---- 125
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
+L+ AR FD++ +R++V+W SMI GY NG
Sbjct: 126 ---------------------------KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 259 FEALGMFANML-----KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+A+ +F ++L D ++ D L S +SAC+ + L + IH+++I+ FD
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
VGN L+ YAK G G + AR+IFD +
Sbjct: 219 SVGNTLLDAYAKGGE-------------------------------GGVAVARKIFDQIV 247
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP-NNYTLSAMLSVSSSLASLDHGK 432
D+D V++ +++ Y Q+G++ +A E+FR +V+ N TLS +L S +L GK
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
IH +R G + V ++I MY K G + AR+ F+ + + SWT+MI H
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMH 366
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G +A++LF M++ G++P++IT+V VL AC+H GL +G R++N MK ++P H
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
+ MVDLLGRAG LQ+AY+ I+ M ++PD + W SLL+ACR+HKN++L +I+ +L ++
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
N G Y L ++Y+ G+W+D +R MK G+ K GFS +++ +VHVF + D H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQR+ IY +A++ ++ E G+V +T+SV HDV+E+ KE LR HSEKLAIAFG+++T
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVP 606
Query: 733 NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+T+ ++KNLRVC+DCH+ IK I K+VDRE VVRDA RFHHFK G CSC DYW
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 226/523 (43%), Gaps = 95/523 (18%)
Query: 30 FVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
F GK H + G +F+ ++L+ Y+ + A+KVFDE+P + + SW +++ Y
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
G A +F ++V N+ D + +
Sbjct: 153 DLNGNALDAVSLFK-----------DLLVDENDD--------------DDAMFLDSMGLV 187
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE--MMAKAVFDGMR 207
SV+++C+ + + +HSFV+K G V+V N+LL+ YAK G+ +A+ +FD +
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
K+ S+N ++S++ SG + A F ++++ VVT+N++
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI------------------- 288
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
TL++ L A ++ L++GK IH +IR + VG ++I Y K G
Sbjct: 289 ------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
VE A R+ FD +++++V +WTAM+ GY
Sbjct: 337 RVETA---------------------------------RKAFDRMKNKNVRSWTAMIAGY 363
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHASALRSGEASS 446
+G A+ELF +M+ G +PN T ++L+ S G + +A R G
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
L ++ + +AG + A + + + +++ W+S++ A H E A R+
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 507 ELGIKPDHITYVGVLTAC-THGGLVEQGQRYYNMMKNVHKIKP 548
EL + Y +L+ G + +R +MKN +KP
Sbjct: 484 EL--DSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKP 524
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 68/270 (25%)
Query: 26 SRNPFVG--KLVHARIIKCGLHLSVFLKNSLMNFYAK--TESISYAKKVFDEMPVKTLCS 81
SR P G + +H+ +IK G V + N+L++ YAK ++ A+K+FD++ K S
Sbjct: 194 SRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 82 WNTILSAYAKQGRLDLACEVF-NLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQ 140
+N+I+S YA+ G + A EVF L+ N+ +VT+N I
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNK--------VVTFNAI----------------- 288
Query: 141 VLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAK 200
T+++VL + + G L GK +H V++ GL V V S+++MY K G A+
Sbjct: 289 ------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR 342
Query: 201 AVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE 260
FD M+ KNV S W +MIAGY +G+ +
Sbjct: 343 KAFDRMKNKNVRS-------------------------------WTAMIAGYGMHGHAAK 371
Query: 261 ALGMFANMLKDSSLKPDKFTLASTLSACAN 290
AL +F M+ DS ++P+ T S L+AC++
Sbjct: 372 ALELFPAMI-DSGVRPNYITFVSVLAACSH 400
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/656 (36%), Positives = 386/656 (58%), Gaps = 34/656 (5%)
Query: 130 IRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNM 189
+R V+++ P T +++ C+ L GKKVH + +G + + N LL M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 190 YAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMI 249
YAK G + A+ VFD M +++ SWNV+V+ + G L+ AR FD+M E+D +W +M+
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 250 AGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEF 309
GY + EAL +++ M + + +P+ FT++ ++A A ++ ++ GK+IH +I+R
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 310 DATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
D+ + + +++L+D Y K G I AR IF
Sbjct: 250 DS---------------------------------DEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
D + ++DVV+WT+M+ Y ++ ++ LF +V +PN YT + +L+ + L + +
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE 336
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
GKQ+H R G S++L+ MY+K GNI +A+ V + + + VSWTS+I
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQ+G +EA++ F+ +L+ G KPDH+T+V VL+ACTH GLVE+G ++ + H++ T
Sbjct: 396 AQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHT 455
Query: 550 PSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLL 609
H+ +VDLL R+G ++ + I MP++P W S+L C + N+DL + AA++L
Sbjct: 456 SDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Query: 610 LIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVED 669
IEP+N Y + N+Y++ GKWE+ +RK M+ +GV K G SW +I+ K HVF D
Sbjct: 516 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAAD 575
Query: 670 WLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIS 729
HP + I + ++ ++KE G+VP T+ VLHDVE++ KE+ L +HSEKLA+AF ++S
Sbjct: 576 TSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILS 635
Query: 730 TPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
T E T +++ KNLR C DCH AIKFI + R+I VRD+TRFH F+ G CSC DYW
Sbjct: 636 TEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 251/539 (46%), Gaps = 78/539 (14%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
P Y +L+Q ++R GK VH I G + + N L+ YAK S+ A+KVF
Sbjct: 84 PASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVF 143
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
DEMP + LCSWN +++ YA+ G L+ A ++F+ M +DS SWT ++ Y + + + A+
Sbjct: 144 DEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALV 203
Query: 132 MFVEMVQ-DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++ M + P FTV+ +A+ A+ + GK++H +V+ GL + +SL++MY
Sbjct: 204 LYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMY 263
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
K G A+ +FD + K+V SW ++ + S R W
Sbjct: 264 GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR------------------WR---- 301
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
E +F+ ++ S +P+++T A L+ACA+L +LGKQ+H Y+ R FD
Sbjct: 302 ---------EGFSLFSELV-GSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
++L+ Y K G +E A+ +V+ G +++++T+L+ G
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVD--GCPKPDLVSWTSLIGGCA------------- 396
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
QNG +A++ F +++ G KP++ T +LS + ++
Sbjct: 397 ------------------QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 431 GKQIHASALRSGEASSLSVS-NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G + S S S L+ + +++G + V + + + W S++
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Query: 490 AQHG---LGEEAIQ-LFERMLELGIKPDH-ITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+ +G L EEA Q LF+ I+P++ +TYV + G E+ + M+ +
Sbjct: 499 STYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 101/260 (38%), Gaps = 43/260 (16%)
Query: 2 ETPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKT 61
E PN + L A L L GK VH + + G F +SL++ Y K
Sbjct: 315 ERPNEYTFAGVLNACADLTTEEL-------GKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 62 ESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYN 121
+I AK V D P L SW +++ A+ G+ D A + F+L
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL----------------- 410
Query: 122 EIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK-VHSFVVKTGLSGCV 180
+++ P T +VL++CT G + G + +S K LS
Sbjct: 411 --------------LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTS 456
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS-WNVVVSLHIHSGRLDLARAQFDQMIE 239
+ L+++ A+ G K+V M +K W V+ G +DLA ++ +
Sbjct: 457 DHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK 516
Query: 240 ---RDVVTWNSMIAGYSQNG 256
+ VT+ +M Y+ G
Sbjct: 517 IEPENPVTYVTMANIYAAAG 536
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/739 (35%), Positives = 415/739 (56%), Gaps = 90/739 (12%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSV 111
NS++ Y A+K+FDEMP + + SWN ++S Y K G +D A +VF+LMP R+ V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 112 SWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
SWT ++ Y G+ A +F +M + + + T +L G + K++ +
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 172 VKTGLSGCVNVT-NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
N+ S+++ K G A+ +FD M ++V +W +V+ + + R+D A
Sbjct: 168 PDKD-----NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDA 222
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD M E+ V+W SM+ GY QNG +A +F M +KP + AC
Sbjct: 223 RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKP--------VIAC-- 268
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
NA+IS + G + A++
Sbjct: 269 --------------------------NAMISGLGQKGEIAKARR---------------- 286
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKP 410
+FDS+++R+ +W ++ +E+NG +A++LF M ++G +P
Sbjct: 287 -----------------VFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVF 470
TL ++LSV +SLASL HGKQ+HA +R + V++ L+TMY K G + ++ +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 471 NLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM-LELGIKPDHITYVGVLTACTHGGL 529
+ ++ + W S+I A HGLGEEA+++F M L KP+ +T+V L+AC++ G+
Sbjct: 390 DRFP-SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 530 VEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLL 589
VE+G + Y M++V +KP +H+A MVD+LGRAG EA I++M +EPD WGSLL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 590 SACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKK 649
ACR H LD+ + A+KL+ IEP+NSG Y L N+Y+S G+W D A +RK MK V+K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 650 TQGFSWVQIQNKVHVF---GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVE 706
+ G SW +++NKVH F G+ HP++++I + ++ ++E G+ PD + LHDV+
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINS--HPEQESILKILDELDGLLREAGYNPDCSYALHDVD 626
Query: 707 EDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVR 766
E+ K L++HSE+LA+A+ L+ E +R+MKNLRVC+DCH+AIK I K+ +REI++R
Sbjct: 627 EEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILR 686
Query: 767 DATRFHHFKKGLCSCRDYW 785
DA RFHHF+ G CSC+DYW
Sbjct: 687 DANRFHHFRNGECSCKDYW 705
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 62/286 (21%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV +++ Y + + A+K+FD MP KT SW ++L Y + GR++ A E+F +MP
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP 261
Query: 107 -------------------------------NRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
R+ SW T+I + G A+ +F+
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + V PT T+ S+L+ C +L L GK+VH+ +V+ V V + L+ MY K G+
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
+ +K +FD K++ + WNS+I+GY+ +
Sbjct: 382 LVKSKLIFDRFPSKDI-------------------------------IMWNSIISGYASH 410
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
G EAL +F M S KP++ T +TLSAC+ ++ G +I+
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 39/238 (16%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P P+LIS L A L + GK VHA++++C + V++ + LM Y K
Sbjct: 329 PTFPTLISILSVCASLASLHH-------GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ +K +FD P K + WN+I+S YA G + A +VF MP S
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK----------- 430
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKT-GLSGCVNV 182
P + T + L++C+ G + G K++ + G+
Sbjct: 431 -------------------PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH 471
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIE 239
+++M + G A + D M ++ + + W ++ +LD+A ++IE
Sbjct: 472 YACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE 529
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/704 (36%), Positives = 390/704 (55%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N++++ Y K R+D A +VF+ M RD +SW +II Y G + + +FV+M+ +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
T+ SV A C +S G+ VHS VK S N+LL+MY+K GD
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
LD A+A F +M +R VV++ SMIAGY++ G EA+
Sbjct: 347 ------------------------LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F M ++ + PD +T+ + L+ CA L GK++H +I + V NAL
Sbjct: 383 KLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL--- 438
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
+D Y K G + A +F +R +D+++W
Sbjct: 439 ------------------------------MDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ GY +N +A+ LF ++ E P+ T++ +L +SL++ D G++IH +R+
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G S V+N+L+ MY+K G + A +F+ I ++ VSWT MI HG G+EAI L
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F +M + GI+ D I++V +L AC+H GLV++G R++N+M++ KI+PT H+A +VD+L
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
R G L +AY FIENMP+ PD WG+LL CR+H ++ L + AEK+ +EP+N+G Y
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVL 707
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
+ N+Y+ KWE +RK + G++K G SW++I+ +V++F D +P+ + I
Sbjct: 708 MANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAF 767
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ K+ + E G+ P T L D EE KE+ L HSEKLA+A G+IS+ +R+ KN
Sbjct: 768 LRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKN 827
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH KF+ KL REIV+RD+ RFH FK G CSCR +W
Sbjct: 828 LRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 226/486 (46%), Gaps = 72/486 (14%)
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
+R T + + E G +NA+++ + + P T+ SVL C L GK+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
V +F+ G N+ + L MY GD A VFD ++++ WN++++ SG
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG- 174
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFE-ALGMFANMLKDSSLKPDKFTLASTL 285
DF ++G+F M+ S ++ D +T +
Sbjct: 175 -------------------------------DFSGSIGLFKKMMS-SGVEMDSYTFSCVS 202
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
+ ++L + G+Q+H +I+++ F VGN+L++ Y K V+ A+K+ ++ ++ +
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--MTERD 260
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
VI++ ++++GY+ NGL + + +F M+
Sbjct: 261 VISWNSIINGYV-------------------------------SNGLAEKGLSVFVQMLV 289
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G + + T+ ++ + + + G+ +H+ +++ + N L+ MYSK G++++
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDS 349
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
A+ VF + R VS+TSMI A+ GL EA++LFE M E GI PD T VL C
Sbjct: 350 AKAVFREMSDRS-VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
L+++G+R + +K + + +++D+ + G +QEA M ++ D+++W
Sbjct: 409 RYRLLDEGKRVHEWIKE-NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISW 466
Query: 586 GSLLSA 591
+++
Sbjct: 467 NTIIGG 472
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/726 (36%), Positives = 401/726 (55%), Gaps = 77/726 (10%)
Query: 61 TESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTY 120
+ I A++VF+++P + + +++ Y + RL A +F+ MP RD VSW ++I
Sbjct: 48 SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGC 107
Query: 121 NEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCV 180
E G A+++F EM + V+ S TA+ ++GC
Sbjct: 108 VECGDMNTAVKLFDEMPERSVV-----------SWTAM-----------------VNGCF 139
Query: 181 NVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER 240
+ G A+ +F M +K+ ++WN +V ++ G++D A F QM +
Sbjct: 140 -----------RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+V++W +MI G QN EAL +F NML+ +K ++ACAN +G Q+
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLR-CCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H II+ F V +LI+ YA
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCK--------------------------------- 274
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
IG +R++FD V WTA+L GY N ++DA+ +F M+R PN T ++ L+
Sbjct: 275 RIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
S+L +LD GK++H A++ G + V N+L+ MYS +GN+N A VF I +++ V
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIV 393
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQR-YYNM 539
SW S+IV AQHG G+ A +F +M+ L +PD IT+ G+L+AC+H G +E+G++ +Y M
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
++ I H+ MVD+LGR G L+EA IE M ++P+ + W +LLSACR+H ++D
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVD 513
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
G+ AA + ++ +S AY L N+Y+S G+W + + +R MK G+ K G SWV I+
Sbjct: 514 RGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIR 573
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
K H F D H R IY K+ + +++KE+G+ PD S LHDVE++ KE+ML +HSE
Sbjct: 574 GKKHEFFSGDQPHCSR--IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSE 631
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
+LAIAFGLI+T E + + +MKNLRVC DCH+ IK I +V REIV+RD RFHHFK G C
Sbjct: 632 RLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTC 691
Query: 780 SCRDYW 785
SC DYW
Sbjct: 692 SCGDYW 697
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 221/489 (45%), Gaps = 98/489 (20%)
Query: 47 SVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP 106
SV +++N ++ + A+++F +MPVK +WN+++ Y + G++D A ++F MP
Sbjct: 127 SVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
++ +SWTT+I ++ R A+ +F M++ + T T V+ +C G +
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246
Query: 167 VHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGR 226
VH ++K G V+ SL+ YA + R
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYA-------------------------------NCKR 275
Query: 227 LDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLS 286
+ +R FD+ + V W ++++GYS N +AL +F+ ML++S L P++ T AS L+
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL-PNQSTFASGLN 334
Query: 287 ACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
+C+ L L GK++H ++ + VGN+L+ Y+
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDS-------------------- 374
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
G++ A +F + + +V+W +++VG Q+G K A +F M+R
Sbjct: 375 -------------GNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 407 GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
+P+ T + +LS S L+ G+++ Y + IN
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLEKGRKL---------------------FYYMSSGIN-- 458
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
H ++ +T M+ L + G +EA +L ERM+ +KP+ + ++ +L+AC
Sbjct: 459 -------HIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSACRM 508
Query: 527 GGLVEQGQR 535
V++G++
Sbjct: 509 HSDVDRGEK 517
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 204/421 (48%), Gaps = 25/421 (5%)
Query: 216 VVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLK 275
V++ H+ S R+D AR F+Q+ V + MI GY+++ +AL +F D
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLF-----DEMPV 94
Query: 276 PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG-NALISCYAKVGGVEIAQK 334
D + S +S C ++ G A + E V A+++ + G V+ A++
Sbjct: 95 RDVVSWNSMISGC-----VECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAER 149
Query: 335 IVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNK 394
+ Q + + A+ +++ GY++ G + A ++F + ++V++WT M+ G +QN +
Sbjct: 150 LFYQMPVK--DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 395 DAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
+A++LF++M+R K + + +++ ++ + G Q+H ++ G VS +LI
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLI 267
Query: 455 TMYSKAGNINAARRVFN-LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPD 513
T Y+ I +R+VF+ +H ++ WT+++ + + E+A+ +F ML I P+
Sbjct: 268 TFYANCKRIGDSRKVFDEKVH--EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPN 325
Query: 514 HITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDLLGRAGLLQEAYN 571
T+ L +C+ G ++ G+ + + K+ F S+V + +G + +A +
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEMHGVAV---KLGLETDAFVGNSLVVMYSDSGNVNDAVS 382
Query: 572 FIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLI--EPDNSGAYSALCNLYSSC 629
+ + +V+W S++ C H + +++ + EPD ++ L + S C
Sbjct: 383 VFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEI-TFTGLLSACSHC 440
Query: 630 G 630
G
Sbjct: 441 G 441
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 80/343 (23%)
Query: 13 LEFYAHLLQSNLKSRN-PF--------------VGKLVHARIIKCGLHLSVFLKNSLMNF 57
L+ + ++L+ +KS + PF +G VH IIK G ++ SL+ F
Sbjct: 210 LDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF 269
Query: 58 YAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTII 117
YA + I ++KVFDE + + W +LS Y+
Sbjct: 270 YANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN------------------------- 304
Query: 118 VTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLS 177
+ ++A+ +F M+++ +LP Q T S L SC+ALG L GK++H VK GL
Sbjct: 305 ------KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE 358
Query: 178 GCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM 237
V NSL+ MY+ G+ A +VF + K++ SWN
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN---------------------- 396
Query: 238 IERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG 297
S+I G +Q+G A +F M++ + +PD+ T LSAC++ L+ G
Sbjct: 397 ---------SIIVGCAQHGRGKWAFVIFGQMIRLNK-EPDEITFTGLLSACSHCGFLEKG 446
Query: 298 KQIHAYIIR--TEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
+++ Y+ D ++ + G ++ A++++E+
Sbjct: 447 RKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/578 (41%), Positives = 354/578 (61%), Gaps = 15/578 (2%)
Query: 222 IHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD--FEALGMFANMLKDSSLKPDKF 279
+H LD A F+QM +R+ +WN++I G+S++ D A+ +F M+ D ++P++F
Sbjct: 70 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 280 TLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIA-----QK 334
T S L ACA K++ GKQIH ++ F V + L+ Y G ++ A +
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 335 IVEQSGISYLN-------VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
I+E+ + + ++ + ++DGY+++GD AR +FD +R R VV+W M+ GY
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSL 447
NG KDAVE+FR M + +PN TL ++L S L SL+ G+ +H A SG
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 448 SVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE 507
+ +ALI MYSK G I A VF + R+ ++W++MI A HG +AI F +M +
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 508 LGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
G++P + Y+ +LTAC+HGGLVE+G+RY++ M +V ++P H+ MVDLLGR+GLL
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA FI NMP++PD V W +LL ACR+ N+++GK A L+ + P +SGAY AL N+Y+
Sbjct: 429 EAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G W + + +R MK ++K G S + I +H F VED HP+ I + + +I D
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISD 548
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
+++ G+ P T VL ++EE+ KE +L +HSEK+A AFGLIST +RI+KNLR+C D
Sbjct: 549 KLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICED 608
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CHS+IK I K+ R+I VRD RFHHF+ G CSC DYW
Sbjct: 609 CHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 210/443 (47%), Gaps = 30/443 (6%)
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN--AIRMFVEMVQDQ-VLPTQFTVTSV 151
LD A ++FN MP R+ SW TII ++E K AI +F EM+ D+ V P +FT SV
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF-------- 203
L +C G + GK++H +K G G V ++L+ MY G A+ +F
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 204 ------DGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
R + WNV++ ++ G AR FD+M +R VV+WN+MI+GYS NG+
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
+A+ +F M K ++P+ TL S L A + L L+LG+ +H Y + +G+
Sbjct: 255 FKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
ALI Y+K G +E A + E+ + NVI ++ +++G+ G G A F +R V
Sbjct: 314 ALIDMYSKCGIIEKAIHVFER--LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 378 ----VAWTAMLVGYEQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGK 432
VA+ +L GL ++ F MV +G +P M+ + LD +
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLI--HWRQETVSWTSMIVALA 490
+ L + AL+ GN+ +RV N++ ++ ++ ++ A
Sbjct: 432 EF---ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Query: 491 QHGLGEEAIQLFERMLELGIKPD 513
G E ++ RM E I+ D
Sbjct: 489 SQGNWSEVSEMRLRMKEKDIRKD 511
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 182/404 (45%), Gaps = 56/404 (13%)
Query: 9 LISPLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
+ P F + +L++ K+ GK +H +K G F+ ++L+ Y + A
Sbjct: 123 FVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDA 182
Query: 68 KKVF------DEMPVKT--------LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+ +F +M V T + WN ++ Y + G A +F+ M R VSW
Sbjct: 183 RVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSW 242
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
T+I Y+ G FK+A+ +F EM + + P T+ SVL + + LG L G+ +H +
Sbjct: 243 NTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAED 302
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
+G+ + ++L++MY+K G ++ KA+ H+
Sbjct: 303 SGIRIDDVLGSALIDMYSKCG--IIEKAI------------------HV----------- 331
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
F+++ +V+TW++MI G++ +G +A+ F M + + ++P + L+AC++
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVAYINLLTACSHGGL 390
Query: 294 LKLGKQIHAYIIRTEFDATGPV---GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
++ G++ + ++ D P ++ + G ++ A++ + I +VI +
Sbjct: 391 VEEGRRYFSQMVSV--DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI-WK 447
Query: 351 TLLDGYIKIGDIGPARRIFDSLRD---RDVVAWTAMLVGYEQNG 391
LL G++ +R+ + L D D A+ A+ Y G
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/601 (39%), Positives = 365/601 (60%), Gaps = 20/601 (3%)
Query: 201 AVFDGMRLKNVS----------SWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
A+F+GM L V+ + ++ GR++ AR FD+M RDVVTWN+MI
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
Y + G EA +F M KDS++ PD+ L + +SAC ++ + I+ ++I +
Sbjct: 186 RYCRFGLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR 244
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFD 370
+ AL++ YA G +++A++ + +S N+ T ++ GY K G + A+ IFD
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRK--MSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 371 SLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDH 430
+D+V WT M+ Y ++ ++A+ +F M G KP+ ++ +++S ++L LD
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 431 GKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALA 490
K +H+ +G S LS++NALI MY+K G ++A R VF + R+ VSW+SMI AL+
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALS 421
Query: 491 QHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTP 550
HG +A+ LF RM + ++P+ +T+VGVL C+H GLVE+G++ + M + + I P
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 551 SHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLL 610
H+ MVDL GRA LL+EA IE+MP+ +VV WGSL+SACR+H L+LGK AA+++L
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 611 IEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDW 670
+EPD+ GA + N+Y+ +WED NIR+ M+ V K +G S + K H F + D
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDK 601
Query: 671 LHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLIST 730
H Q + IY K+ ++ ++K G+VPD SVL DVEE+ K+ ++ HSEKLA+ FGL++
Sbjct: 602 RHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNE 661
Query: 731 PENT------TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDY 784
+ +RI+KNLRVC DCH K + K+ +REI+VRD TRFH +K GLCSCRDY
Sbjct: 662 EKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDY 721
Query: 785 W 785
W
Sbjct: 722 W 722
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 241/522 (46%), Gaps = 57/522 (10%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+PP I + L+ +S P L + RI G L F +F ++
Sbjct: 71 PSPPESI----VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQF------SFLPILKA 120
Query: 64 ISYAKKVFDEMP-------VKTLCS---WNTILSAYAKQGRLDLACEVFNLMPNRDSVSW 113
+S +F+ M + TLC + YA GR++ A VF+ M +RD V+W
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
T+I Y G A ++F EM V+P + + +++++C G++ + ++ F+++
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
+ ++ +L+ MYA G MA+ F M ++N+ +VS + GRLD A+
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
FDQ ++D+V W +MI+ Y ++ Y EAL +F M S +KPD ++ S +SACANL
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC-SGIKPDVVSMFSVISACANLGI 359
Query: 294 LKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLL 353
L K +H+ I ++ + NALI+ YAK GG++
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD----------------------- 396
Query: 354 DGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY 413
R +F+ + R+VV+W++M+ +G DA+ LF M +E +PN
Sbjct: 397 ----------ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEV 446
Query: 414 TLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVSNALITMYSKAGNINAARRVFNL 472
T +L S ++ GK+I AS + L ++ ++ +A + A V
Sbjct: 447 TFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES 506
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
+ V W S++ A HG E +R+LEL +PDH
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL--EPDH 546
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 396 AVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALI 454
A LF +R G + + ++ +L S +++L G ++H A + V +
Sbjct: 94 ATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFM 153
Query: 455 TMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
MY+ G IN AR VF+ + R + V+W +MI + GL +EA +LFE M + + PD
Sbjct: 154 DMYASCGRINYARNVFDEMSHR-DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE 212
Query: 515 ITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIE 574
+ +++AC G + + Y + + ++ ++V + AG + A F
Sbjct: 213 MILCNIVSACGRTGNMRYNRAIYEFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 575 NMPL 578
M +
Sbjct: 272 KMSV 275
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 9/227 (3%)
Query: 408 PKPNNYTLS-AMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P P T + +L S SL+H KQ+HA LR+ L+ +++ S + N++ A
Sbjct: 4 PPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYA 63
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTH 526
VF+ I E++ + + L++ I ++R+ +G + D +++ +L A +
Sbjct: 64 LNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSK 123
Query: 527 GGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWG 586
+ +G + + + + P +D+ G + A N + M DVV W
Sbjct: 124 VSALFEGMELHGVAFKIATL-CDPFVETGFMDMYASCGRINYARNVFDEMS-HRDVVTWN 181
Query: 587 SLLSA-CRVHKNLDLGKIAAE-KLLLIEPDNSGAYSALCNLYSSCGK 631
+++ CR + K+ E K + PD LCN+ S+CG+
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDE----MILCNIVSACGR 224
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/704 (34%), Positives = 409/704 (58%), Gaps = 68/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y + G++ A + M N D V+W ++I Y + +K A+ F +M+
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
+ ++TS++A+ L +L AG ++H++V+K G + V N+L++MY+K
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC--------- 434
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
+L + GR F +M ++D+++W ++IAGY+QN EAL
Sbjct: 435 ----------------NLTCYMGR------AFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+F ++ K ++ D+ L S L A + L+ + + K+IH +I+R
Sbjct: 473 ELFRDVAK-KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK--------------- 516
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
L+ + L+D Y K ++G A R+F+S++ +DVV+WT+
Sbjct: 517 -------------------GLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
M+ NG +AVELFR MV G ++ L +LS ++SL++L+ G++IH LR G
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
S++ A++ MY+ G++ +A+ VF+ I R+ + +TSMI A HG G+ A++LF
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
++M + PDHI+++ +L AC+H GL+++G+ + +M++ ++++P P H+ +VD+LGR
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
A + EA+ F++ M EP W +LL+ACR H ++G+IAA++LL +EP N G +
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
N+++ G+W D +R MK G++K G SW+++ KVH F D HP+ IY K+
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 683 AKIWDEI-KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+++ ++ +E+G+V DT VLH+V+E K QML HSE++AIA+GL+ TP+ LRI KN
Sbjct: 857 SEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKN 916
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+ K + KL R+IV+RDA RFHHF+ GLCSC D W
Sbjct: 917 LRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 156/599 (26%), Positives = 274/599 (45%), Gaps = 121/599 (20%)
Query: 11 SPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
SP+E +A++L+ K R G+ +H+RI K + ++F A K V
Sbjct: 78 SPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT-------FPSFELDFLA-------GKLV 123
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
F Y K G LD A +VF+ MP+R + +W T+I Y G +A+
Sbjct: 124 F----------------MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASAL 167
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
++ M + V + ++L +C L D+ +G ++HS +VK G + N+L++MY
Sbjct: 168 ALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
AK D A+ +FDG + K D V WNS+++
Sbjct: 228 AKNDDLSAARRLFDGFQEKG------------------------------DAVLWNSILS 257
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
YS +G E L +F M + P+ +T+ S L+AC KLGK+IHA ++++
Sbjct: 258 SYSTSGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 311 ATG-PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF 369
++ V NALI+ Y + G + A++I+ Q
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQ------------------------------- 345
Query: 370 DSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLD 429
+ + DVV W +++ GY QN + K+A+E F M+ G K + +++++++ S L++L
Sbjct: 346 --MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 430 HGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVAL 489
G ++HA ++ G S+L V N LI MYSK R F +H ++ +SWT++I
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH-DKDLISWTTVIAGY 462
Query: 490 AQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPT 549
AQ+ EA++LF + + ++ D + +L A + ++K++ +K
Sbjct: 463 AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS-------------VLKSMLIVKEI 509
Query: 550 PSHFA-----------SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKN 597
H +VD+ G+ + A E++ DVV+W S++S+ ++ N
Sbjct: 510 HCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGN 567
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/764 (34%), Positives = 407/764 (53%), Gaps = 88/764 (11%)
Query: 26 SRNPFVGKLVHARIIKCGLHLSVFLK-NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNT 84
SR +GK+ AR L NS+++ Y A+++FDEM + + SWN
Sbjct: 25 SRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNG 84
Query: 85 ILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPT 144
++S Y K + A VF LMP R+ VSWT ++ Y + G A +F M +
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN---- 140
Query: 145 QFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFD 204
+ + T + G + +K++ + + N+ L + G A+ +FD
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL----CREGRVDEARLIFD 196
Query: 205 GMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGM 264
MR +NV +W +++ + + R+D+AR F+ M E+ V+W SM+ GY+ +G +A
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 265 FANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYA 324
F M +KP + AC NA+I +
Sbjct: 257 FEVM----PMKP--------VIAC----------------------------NAMIVGFG 276
Query: 325 KVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAML 384
+VG +I ARR+FD + DRD W M+
Sbjct: 277 EVG---------------------------------EISKARRVFDLMEDRDNATWRGMI 303
Query: 385 VGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEA 444
YE+ G +A++LF M ++G +P+ +L ++LSV ++LASL +G+Q+HA +R
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 445 SSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFER 504
+ V++ L+TMY K G + A+ VF+ ++ + W S+I A HGLGEEA+++F
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 505 MLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAG 564
M G P+ +T + +LTAC++ G +E+G + M++ + PT H++ VD+LGRAG
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 565 LLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCN 624
+ +A IE+M ++PD WG+LL AC+ H LDL ++AA+KL EPDN+G Y L +
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 625 LYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF---GVEDWLHPQRDAIYNK 681
+ +S KW D A +RK+M+ V K G SW+++ KVH+F G+++ HP++ I
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKN--HPEQAMILMM 600
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ K ++E G+ PD + VLHDV+E+ K L HSE+LA+A+GL+ PE +R+MKN
Sbjct: 601 LEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKN 660
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
LRVC DCH+AIK I K+ +REI++RDA RFHHF G CSCRDYW
Sbjct: 661 LRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 40/240 (16%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ PSLIS L A L ++L+ G+ VHA +++C V++ + LM Y K
Sbjct: 329 PSFPSLISILSVCATL--ASLQ-----YGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
+ AK VFD K + WN+I+S YA G + A ++F+ MP+ +
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT------------- 428
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNV 182
+P + T+ ++L +C+ G L G ++ S K ++ V
Sbjct: 429 ------------------MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 183 TNSLLNMYAKVGDEMMAKAVFDGMRLK-NVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
+ ++M + G A + + M +K + + W ++ RLDLA ++ E +
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENE 530
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 271/760 (35%), Positives = 419/760 (55%), Gaps = 102/760 (13%)
Query: 32 GKLVHARIIKCGL-HLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
G+ VH +I GL V + N L+N YAK SI+ A++
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR--------------------- 370
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
VF M ++DSVSW ++I ++ G F A+ + M + +LP FT+ S
Sbjct: 371 ----------VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
L+SC +L G+++H +K G+ N
Sbjct: 421 SLSSCASLKWAKLGQQIHGESLKLGID-------------------------------LN 449
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF-EALGMFANML 269
VS N +++L+ +G L+ R F M E D V+WNS+I +++ EA+ F N
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ + K ++ T +S LSA ++L +LGKQIH ++ NALI+CY K G +
Sbjct: 510 R-AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+ +KI + A R RD V W +M+ GY
Sbjct: 569 DGCEKIFSRM-------------------------AER-------RDNVTWNSMISGYIH 596
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N L A++L M++ G + +++ + +LS +S+A+L+ G ++HA ++R+ S + V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERM-LEL 508
+AL+ MYSK G ++ A R FN + R + SW SMI A+HG GEEA++LFE M L+
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRN-SYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQE 568
PDH+T+VGVL+AC+H GL+E+G +++ M + + + P HF+ M D+LGRAG L +
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 569 AYNFIENMPLEPDVVAWGSLLSAC-RVH-KNLDLGKIAAEKLLLIEPDNSGAYSALCNLY 626
+FIE MP++P+V+ W ++L AC R + + +LGK AAE L +EP+N+ Y L N+Y
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 835
Query: 627 SSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIW 686
++ G+WED RK MK VKK G+SWV +++ VH+F D HP D IY K+ ++
Sbjct: 836 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Query: 687 DEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT-TLRIMKNLRVC 745
++++ G+VP T L+D+E++ KE++L +HSEKLA+AF L + +T +RIMKNLRVC
Sbjct: 896 RKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVC 955
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCHSA K+I K+ R+I++RD+ RFHHF+ G CSC D+W
Sbjct: 956 GDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/590 (25%), Positives = 255/590 (43%), Gaps = 115/590 (19%)
Query: 12 PLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVF 71
PL F +QS + R + H+R+ K L V+L N+L+N Y +T A+KVF
Sbjct: 6 PLSF----VQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 72 DEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIR 131
DEMP++ SW I+S Y++ G K A+
Sbjct: 60 DEMPLRNCVSWACIVSGYSRN-------------------------------GEHKEALV 88
Query: 132 MFVEMVQDQVLPTQFTVTSVLASCTALGDLSA--GKKVHSFVVKTGLSGCVNVTNSLLNM 189
+MV++ + Q+ SVL +C +G + G+++H + K + V+N L++M
Sbjct: 89 FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148
Query: 190 YAK-VGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
Y K +G A F + +KN SWN ++S+
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISV---------------------------- 180
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK--LKLGKQIHAYIIR 306
YSQ G A +F++M D S +P ++T S ++ +L + ++L +QI I +
Sbjct: 181 ---YSQAGDQRSAFRIFSSMQYDGS-RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 307 TEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPAR 366
+ VG+ L+S +AK G +SY AR
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSG------------SLSY---------------------AR 263
Query: 367 RIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF---RSMVREGPKPNNYTLSAMLSVS- 422
++F+ + R+ V ++VG + ++A +LF SM+ P+ LS+ S
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 423 SSLASLDHGKQIHASALRSGEASSL-SVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
+ L G+++H + +G + + N L+ MY+K G+I ARRVF + +++VS
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVS 382
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W SMI L Q+G EA++ ++ M I P T + L++C + GQ+ +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
+ I S +++ L G L E +MP E D V+W S++ A
Sbjct: 443 KL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 246/525 (46%), Gaps = 77/525 (14%)
Query: 83 NTILSAYAKQ-GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQV 141
N ++S Y K G + A F + ++SVSW +II Y++ G ++A R+F M D
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 142 LPTQFTVTSVLASCTALG--DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
PT++T S++ + +L D+ +++ + K+GL + V + L++ +AK G A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
+ V F+QM R+ VT N ++ G + +
Sbjct: 263 RKV-------------------------------FNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 260 EALGMFANMLKDSSLKPDKFT-LASTLSACANLEK--LKLGKQIHAYIIRTEF-DATGPV 315
EA +F +M + P+ + L S+ + E+ LK G+++H ++I T D +
Sbjct: 292 EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
GN L++ YAK G I ARR+F + D+
Sbjct: 352 GNGLVNMYAKC---------------------------------GSIADARRVFYFMTDK 378
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIH 435
D V+W +M+ G +QNG +AVE ++SM R P ++TL + LS +SL G+QIH
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 436 ASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLG 495
+L+ G ++SVSNAL+T+Y++ G +N R++F+ + + VSW S+I ALA+
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALARSERS 497
Query: 496 -EEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKIKPTPSHF 553
EA+ F G K + IT+ VL+A + E G++ + + +KN I +
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN--NIADEATTE 555
Query: 554 ASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNL 598
+++ G+ G + M D V W S++S +H L
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNEL 599
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 126/554 (22%), Positives = 231/554 (41%), Gaps = 124/554 (22%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P +LIS L A L + L G+ +H +K G+ L+V + N+LM YA+T
Sbjct: 413 PGSFTLISSLSSCASLKWAKL-------GQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
++ +K+F MP SWN+I+ A A+ R S +V
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSER-----------------SLPEAVVC---- 504
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
F NA R ++ F+ S + G+L GK++H +K ++
Sbjct: 505 --FLNAQR-----AGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTE 555
Query: 184 NSLLNMYAKVGDEMMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
N+L+ Y K G+ + +F M R NV+
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVT----------------------------- 586
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
WNSMI+GY N +AL + ML+ + + D F A+ LSA A++ L+ G ++H
Sbjct: 587 ---WNSMISGYIHNELLAKALDLVWFMLQ-TGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
A +R ++ VG+AL+ Y+K G ++ A
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYAL---------------------------- 674
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNY-TLSAMLS 420
R F+++ R+ +W +M+ GY ++G ++A++LF +M +G P ++ T +LS
Sbjct: 675 -----RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 421 VSSSLASLDHG-KQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQET 479
S L+ G K + + G A + + + + +AG ++ + +
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 480 VSWTSMIVALAQHG-----LGEEAIQLFERMLELGIKPDH-ITYVGVLTACTHGGLVEQG 533
+ W +++ A + LG++A ++ ++P++ + YV + G + G
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEML-----FQLEPENAVNYVLL------GNMYAAG 838
Query: 534 QRYYNMMKNVHKIK 547
R+ +++K K+K
Sbjct: 839 GRWEDLVKARKKMK 852
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 362/638 (56%), Gaps = 68/638 (10%)
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
++L +C L G++VH+ ++KT + LL Y K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC-------------- 102
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
L+ AR D+M E++VV+W +MI+ YSQ G+ EAL +FA M+
Sbjct: 103 -----------------LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM 145
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ S KP++FT A+ L++C L LGKQIH I++ +D+ VG
Sbjct: 146 R-SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG------------- 191
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
++LLD Y K G I AR IF+ L +RDVV+ TA++ GY Q
Sbjct: 192 --------------------SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
GL+++A+E+F + EG PN T +++L+ S LA LDHGKQ H LR +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML-EL 508
N+LI MYSK GN++ ARR+F+ + R +SW +M+V ++HGLG E ++LF M E
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERT-AISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 509 GIKPDHITYVGVLTACTHGGLVEQGQRYYN-MMKNVHKIKPTPSHFASMVDLLGRAGLLQ 567
+KPD +T + VL+ C+HG + + G ++ M+ + KP H+ +VD+LGRAG +
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 568 EAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYS 627
EA+ FI+ MP +P GSLL ACRVH ++D+G+ +L+ IEP+N+G Y L NLY+
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 628 SCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWD 687
S G+W D N+R M V K G SW+Q + +H F D HP+R+ + KM +I
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISI 530
Query: 688 EIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCND 747
++K+ G+VPD + VL+DV+E+ KE+ML HSEKLA+ FGLI+T E +R+ KNLR+C D
Sbjct: 531 KMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVD 590
Query: 748 CHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
CH+ K K+ +RE+ +RD RFH G+CSC DYW
Sbjct: 591 CHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 202/454 (44%), Gaps = 99/454 (21%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y LL + L R G+ VHA +IK + +L+ L+ FY K + + A+KV DEM
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM- 113
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
P ++ VSWT +I Y++ G A+ +F E
Sbjct: 114 ------------------------------PEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M++ P +FT +VL SC L GK++H +VK + V +SLL+MYAK G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG- 202
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
++ AR F+ + ERDVV+ ++IAGY+Q
Sbjct: 203 ------------------------------QIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G D EAL MF + L + P+ T AS L+A + L L GKQ H +++R E +
Sbjct: 233 GLDEEALEMF-HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
N+LI Y+K G +SY ARR+FD++ +R
Sbjct: 292 QNSLIDMYSKCG------------NLSY---------------------ARRLFDNMPER 318
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
++W AMLVGY ++GL ++ +ELFR M E KP+ TL A+LS S D G I
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Query: 435 HAS--ALRSGEASSLSVSNALITMYSKAGNINAA 466
A G ++ M +AG I+ A
Sbjct: 379 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 64/304 (21%)
Query: 12 PLEF-YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKV 70
P EF +A +L S +++ +GK +H I+K +F+ +SL++ YAK
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA--------- 201
Query: 71 FDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAI 130
G++ A E+F +P RD VS T II Y ++G + A+
Sbjct: 202 ----------------------GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 131 RMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
MF + + + P T S+L + + L L GK+ H V++ L + NSL++MY
Sbjct: 240 EMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMY 299
Query: 191 AKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIA 250
+K G+ A+ +FD M ER ++WN+M+
Sbjct: 300 SKCGNLSYARRLFD-------------------------------NMPERTAISWNAMLV 328
Query: 251 GYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFD 310
GYS++G E L +F M + +KPD TL + LS C++ G I ++ E+
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEY- 387
Query: 311 ATGP 314
T P
Sbjct: 388 GTKP 391
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 43/283 (15%)
Query: 398 ELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMY 457
E M GP+ + A+L+ +L G+++HA +++ + + L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 458 SKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITY 517
K + AR+V + + + VSWT+MI +Q G EA+ +F M+ KP+ T+
Sbjct: 98 GKCDCLEDARKVLDEMP-EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 518 VGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHF---ASMVDLLGRAGLLQEAYNFIE 574
VLT+C + G++ + ++ + SH +S++D+ +AG ++EA E
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWN----YDSHIFVGSSLLDMYAKAGQIKEAREIFE 212
Query: 575 NMP----------------------------------LEPDVVAWGSLLSACRVHKNLDL 600
+P + P+ V + SLL+A LD
Sbjct: 213 CLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 601 GKIAAEKLLLIE-PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
GK A +L E P + ++L ++YS CG A + +M
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 262/771 (33%), Positives = 396/771 (51%), Gaps = 101/771 (13%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
YA + + R+ G+++H + + G + L ++++ Y K + A+KVFD MP
Sbjct: 122 YAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
K WNT++S Y K + +VF + N T
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT------------------- 222
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
T+ +L + L +L G ++HS KTG V +++Y+K G
Sbjct: 223 -----------TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
M A+F R ++ ++N +MI GY+ N
Sbjct: 272 IKMGSALFREFRKPDIVAYN-------------------------------AMIHGYTSN 300
Query: 256 GYDFEALGMFAN-MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
G +L +F ML + L+ TL S + + L L IH Y +++ F +
Sbjct: 301 GETELSLSLFKELMLSGARLRSS--TLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHAS 355
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V AL + Y+K+ +E AR++FD +
Sbjct: 356 VSTALTTVYSKLNEIE---------------------------------SARKLFDESPE 382
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+ + +W AM+ GY QNGL +DA+ LFR M + PN T++ +LS + L +L GK +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H + SS+ VS ALI MY+K G+I ARR+F+L+ + E V+W +MI HG
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE-VTWNTMISGYGLHGQ 501
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
G+EA+ +F ML GI P +T++ VL AC+H GLV++G +N M + + +P+ H+A
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVD+LGRAG LQ A FIE M +EP W +LL ACR+HK+ +L + +EKL ++PD
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N G + L N++S+ + AA +R++ K + K G++ ++I HVF D HPQ
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
IY K+ K+ +++E G+ P+T LHDVEE+ +E M++ HSE+LAIAFGLI+T T
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 741
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI+KNLRVC DCH+ K I K+ +R IVVRDA RFHHFK G+CSC DYW
Sbjct: 742 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 142/603 (23%), Positives = 266/603 (44%), Gaps = 86/603 (14%)
Query: 51 KNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ----GRLDLACEVFNLMP 106
KN+ ++F+ ++ SIS+ + ++ + + ++L+ ++ G + A ++F +
Sbjct: 20 KNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQ 79
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL-PTQFTVTSVLASCTALGDLSAGK 165
D + ++ ++ +++ +F + + L P T +++ + D AG+
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 166 KVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
+H V G + + ++++ MY K A+ VFD M K+ W
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW----------- 188
Query: 226 RLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTL 285
N+MI+GY +N E++ +F +++ +S + D TL L
Sbjct: 189 --------------------NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 286 SACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLN 345
A A L++L+LG QIH+ +T + V IS Y+K G
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK----------------- 271
Query: 346 VIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVR 405
IK+G +F R D+VA+ AM+ GY NG + ++ LF+ ++
Sbjct: 272 -----------IKMGSA-----LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 406 EGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINA 465
G + + TL +++ VS L + IH L+S S SVS AL T+YSK I +
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 466 ARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
AR++F+ + SW +MI Q+GL E+AI LF M + P+ +T +L+AC
Sbjct: 373 ARKLFDE-SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 526 HGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAW 585
G + G+ ++++++ + + +++ + + G + EA + M + + V W
Sbjct: 432 QLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTW 489
Query: 586 GSLLSACRVHKNLDLGKIAAEKLLLIEPDNSG----AYSALCNLY--SSCGKWEDAANIR 639
+++S +H G+ + E NSG + LC LY S G ++ I
Sbjct: 490 NTMISGYGLH-----GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 640 KSM 642
SM
Sbjct: 545 NSM 547
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 3 TPNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTE 62
+PNP ++ L A L +L GK VH + S+++ +L+ YAK
Sbjct: 417 SPNPVTITCILSACAQLGALSL-------GKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 63 SISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNE 122
SI+ A+++FD M K +WNT++S Y
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLH------------------------------ 499
Query: 123 IGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVN 181
G+ + A+ +F EM+ + PT T VL +C+ G + G ++ +S + + G V
Sbjct: 500 -GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSS-WNVVV-SLHIHSGRLDLARAQFDQMIE 239
++++ + G A + M ++ SS W ++ + IH +LAR +++ E
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT-NLARTVSEKLFE 617
Query: 240 RD 241
D
Sbjct: 618 LD 619
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/677 (36%), Positives = 386/677 (57%), Gaps = 40/677 (5%)
Query: 110 SVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHS 169
SV T I T G + A + F + + T + SCT L +GK++H
Sbjct: 13 SVDPATAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHC 68
Query: 170 FVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDL 229
+V +G S + N L++MY+K+GD A AV+ MR KN S N++++ ++ +G L
Sbjct: 69 LLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVN 128
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD+M +R + TWN+MIAG Q ++ E L +F M PD++TL S S A
Sbjct: 129 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSA 187
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
L + +G+QIH Y I+ G+E L+++
Sbjct: 188 GLRSVSIGQQIHGYTIKY--------------------GLE-------------LDLVVN 214
Query: 350 TTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK 409
++L Y++ G + + S+ R++VAW +++G QNG + + L++ M G +
Sbjct: 215 SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR 274
Query: 410 PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRV 469
PN T +LS S LA G+QIHA A++ G +S ++V ++LI+MYSK G + A +
Sbjct: 275 PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA 334
Query: 470 FNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLE-LGIKPDHITYVGVLTACTHGG 528
F+ ++ V W+SMI A HG G+EAI+LF M E ++ + + ++ +L AC+H G
Sbjct: 335 FSE-REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG 393
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSL 588
L ++G ++MM + KP H+ +VDLLGRAG L +A I +MP++ D+V W +L
Sbjct: 394 LKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTL 453
Query: 589 LSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVK 648
LSAC +HKN ++ + +++L I+P++S Y L N+++S +W D + +RKSM+ VK
Sbjct: 454 LSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 513
Query: 649 KTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEED 708
K G SW + + +VH F + D + IY+ + ++ E+K G+ PDTASVLHD++E+
Sbjct: 514 KEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEE 573
Query: 709 VKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDA 768
KE L HSEKLA+AF L+ PE +RI+KNLRVC+DCH A K+I + +REI +RD
Sbjct: 574 EKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDG 633
Query: 769 TRFHHFKKGLCSCRDYW 785
+RFHHF G CSC DYW
Sbjct: 634 SRFHHFINGKCSCGDYW 650
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 216/507 (42%), Gaps = 70/507 (13%)
Query: 15 FYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEM 74
+ +QS ++ GK +H ++ G F+ N LM+ Y+K A V+ M
Sbjct: 46 LFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRM 105
Query: 75 PVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFV 134
K S N +++ Y + G L A +VF+ MP+R +W +I + + + +F
Sbjct: 106 RKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFR 165
Query: 135 EMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVG 194
EM P ++T+ SV + L +S G+++H + +K GL + V +SL +MY + G
Sbjct: 166 EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG 225
Query: 195 DEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQ 254
+ V M ++N +V WN++I G +Q
Sbjct: 226 KLQDGEIVIRSMPVRN-------------------------------LVAWNTLIMGNAQ 254
Query: 255 NGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGP 314
NG L ++ M+K S +P+K T + LS+C++L G+QIHA I+ +
Sbjct: 255 NGCPETVLYLY-KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 313
Query: 315 VGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRD 374
V ++LIS Y+K G +G A + F D
Sbjct: 314 VVSSLISMYSKCGC---------------------------------LGDAAKAFSERED 340
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE-GPKPNNYTLSAMLSVSSSLASLDHGKQ 433
D V W++M+ Y +G +A+ELF +M + + N +L S D G +
Sbjct: 341 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 400
Query: 434 IHASAL-RSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+ + + G L ++ + +AG ++ A + + + + V W +++ A H
Sbjct: 401 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIH 460
Query: 493 GLGEEAIQLFERMLELGIKP-DHITYV 518
E A ++F+ +L+ I P D YV
Sbjct: 461 KNAEMAQRVFKEILQ--IDPNDSACYV 485
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/651 (37%), Positives = 378/651 (58%), Gaps = 55/651 (8%)
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKV-HSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
QDQ+ P + ++A C GD+ +V H K ++ NSLL +K
Sbjct: 58 QDQIFP----LNKIIARCVRSGDIDGALRVFHGMRAKNTITW-----NSLLIGISKDPSR 108
Query: 197 MM-AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
MM A +FD + + S+N+++S ++ + + A++ FD+M +D +WN+MI GY++
Sbjct: 109 MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV 315
G +A +F +M++ + +
Sbjct: 169 GEMEKARELFYSMMEKNEVS---------------------------------------- 188
Query: 316 GNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIF-DSLRD 374
NA+IS Y + G +E A + + + V+A+T ++ GY+K + A +F D +
Sbjct: 189 WNAMISGYIECGDLEKASHFFKVAPVR--GVVAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 375 RDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQI 434
+++V W AM+ GY +N +D ++LFR+M+ EG +PN+ LS+ L S L++L G+QI
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +S + ++ +LI+MY K G + A ++F ++ +++ V+W +MI AQHG
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGN 365
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
++A+ LF M++ I+PD IT+V VL AC H GLV G Y+ M +K++P P H+
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT 425
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPD 614
MVDLLGRAG L+EA I +MP P +G+LL ACRVHKN++L + AAEKLL +
Sbjct: 426 CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQ 485
Query: 615 NSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQ 674
N+ Y L N+Y+S +WED A +RK MK V K G+SW++I+NKVH F D +HP+
Sbjct: 486 NAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Query: 675 RDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT 734
D+I+ K+ ++ ++K G+ P+ LH+VEE+ KE++L HSEKLA+AFG I P+ +
Sbjct: 546 LDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGS 605
Query: 735 TLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+++ KNLR+C DCH AIKFI ++ REI+VRD TRFHHFK G CSC DYW
Sbjct: 606 QIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 215/465 (46%), Gaps = 47/465 (10%)
Query: 48 VFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ-GRLDLACEVFNLMP 106
+F N ++ ++ I A +VF M K +WN++L +K R+ A ++F+ +P
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 107 NRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKK 166
D+ S+ ++ Y F+ A F M + +++ G++ ++
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYARRGEMEKARE 176
Query: 167 V-HSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSG 225
+ +S + K +S N++++ Y + GD A F ++ V +W +++ ++ +
Sbjct: 177 LFYSMMEKNEVSW-----NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK 231
Query: 226 RLDLARAQF-DQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
+++LA A F D + +++VTWN+MI+GY +N + L +F ML++ ++P+ L+S
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIRPNSSGLSSA 290
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
L C+ L L+LG+QIH + ++ +LIS Y K G
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG----------------- 333
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
++G A ++F+ ++ +DVVAW AM+ GY Q+G A+ LFR M+
Sbjct: 334 ----------------ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS-NALITMYSKAGNI 463
+P+ T A+L + ++ G S +R + ++ + +AG +
Sbjct: 378 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 464 NAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL 508
A ++ + +R + +++ A H E A E++L+L
Sbjct: 438 EEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 179/371 (48%), Gaps = 28/371 (7%)
Query: 52 NSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMP-NRDS 110
N++++ Y + + A F PV+ + +W +++ Y K +++LA +F M N++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
V+W +I Y E R ++ +++F M+++ + P ++S L C+ L L G+++H
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
V K+ L V SL++MY K G+ A +F+ M+ K+V +WN ++S + G D A
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 231 RAQFDQMIER----DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSL--KPDKFT-LAS 283
F +MI+ D +T+ +++ + G + F +M++D + +PD +T +
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVD 429
Query: 284 TLSACANLEK-LKLGKQI----HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQ 338
L LE+ LKL + + HA + T A N ++ +A A+K+++
Sbjct: 430 LLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA-------AEKLLQ- 481
Query: 339 SGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVE 398
++ N + L + Y R+ +++ +VV + GY + ++ V
Sbjct: 482 --LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVK----VPGYSWIEI-RNKVH 534
Query: 399 LFRSMVREGPK 409
FRS R P+
Sbjct: 535 HFRSSDRIHPE 545
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H + K L V SL++ Y K + A K+F+ M K + +WN ++S YA
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD-QVLPTQ 145
+ G D A +F M + D +++ +++ N G + F MV+D +V P
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 146 FTVTSVLASCTALGDLSAGKKV--------HSFVVKTGLSGC 179
T ++ G L K+ H+ V T L C
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/760 (32%), Positives = 403/760 (53%), Gaps = 101/760 (13%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
G VH ++K G L++ N L++ Y K A KVFD
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS------------------ 66
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
MP R+ VSW+ ++ + G K ++ +F EM + + P +FT ++
Sbjct: 67 -------------MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTN 113
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
L +C L L G ++H F +K G V V NSL++MY+K G
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG----------------- 156
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
R++ A F ++++R +++WN+MIAG+ GY +AL F M+++
Sbjct: 157 --------------RINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG-MMQE 201
Query: 272 SSLK--PDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+++K PD+FTL S L AC++ + GKQIH +++R+ F A + G
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS---------ATITG- 251
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
+L+D Y+K G + AR+ FD ++++ +++W+++++GY Q
Sbjct: 252 ---------------------SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQ 290
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
G +A+ LF+ + + +++ LS+++ V + A L GKQ+ A A++ SV
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
N+++ MY K G ++ A + F + + + +SWT +I +HGLG++++++F ML
Sbjct: 351 LNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I+PD + Y+ VL+AC+H G++++G+ ++ + H IKP H+A +VDLLGRAG L+EA
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
+ I+ MP++P+V W +LLS CRVH +++LGK + LL I+ N Y + NLY
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQA 529
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G W + N R+ G+KK G SWV+I+ +VH F + HP I + + +
Sbjct: 530 GYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRL 589
Query: 690 K-EMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENT---TLRIMKNLRVC 745
+ E+G+V LHD++++ KE+ LR HSEKLAI L + N T+R+ KNLRVC
Sbjct: 590 REELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVC 649
Query: 746 NDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
DCH IK + K+ VVRDA RFH F+ G CSC DYW
Sbjct: 650 VDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 228/485 (47%), Gaps = 83/485 (17%)
Query: 141 VLPTQF-TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMA 199
++P Q + S+L CT G G +VH +++K+G + +N L++MY K + +MA
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 200 KAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDF 259
VFD M +NV SW+ ++S H+ +G L + + F +M + +
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY---------------- 104
Query: 260 EALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNAL 319
P++FT ++ L AC L L+ G QIH + ++ F+ VGN+L
Sbjct: 105 ----------------PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSL 148
Query: 320 ISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVA 379
+ Y+K G I A ++F + DR +++
Sbjct: 149 VDMYSKCG---------------------------------RINEAEKVFRRIVDRSLIS 175
Query: 380 WTAMLVGYEQNGLNKDAVELFRSMVREG---PKPNNYTLSAMLSVSSSLASLDHGKQIHA 436
W AM+ G+ G A++ F M++E +P+ +TL+++L SS + GKQIH
Sbjct: 176 WNAMIAGFVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 437 SALRSGE--ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
+RSG SS +++ +L+ +Y K G + +AR+ F+ I + +SW+S+I+ AQ G
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGE 293
Query: 495 GEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
EA+ LF+R+ EL + D ++ L+ QG++ + + T S
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET-SVLN 352
Query: 555 SMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGK----IAAEKLLL 610
S+VD+ + GL+ EA M L+ DV++W +++ H LGK I E L
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKH---GLGKKSVRIFYEMLRH 408
Query: 611 -IEPD 614
IEPD
Sbjct: 409 NIEPD 413
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 102/265 (38%), Gaps = 50/265 (18%)
Query: 410 PNN-YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARR 468
PN L ++L V + D G Q+H L+SG +L SN LI MY K A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC---- 524
VF+ + R VSW++++ +G + ++ LF M GI P+ T+ L AC
Sbjct: 63 VFDSMPERN-VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 525 -------THG--------GLVEQGQRYYNMMKNVHKIKPTPSHFASMVD----------- 558
HG +VE G +M +I F +VD
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 559 ----------LLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKL 608
L G++QEA N+ PD SLL AC + GK L
Sbjct: 182 GFVHAGYGSKALDTFGMMQEA-----NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 609 L---LIEPDNSGAYSALCNLYSSCG 630
+ P ++ +L +LY CG
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCG 261
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 265/785 (33%), Positives = 407/785 (51%), Gaps = 107/785 (13%)
Query: 4 PNPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTES 63
P+ +L++ L A + R +GK VH +K L + L N+LM+ Y+K
Sbjct: 290 PDVATLVTVLPVCA-------REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 342
Query: 64 ISYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEI 123
I+ A+ + F + N++ VSW T++ ++
Sbjct: 343 ITNAQMI-------------------------------FKMNNNKNVVSWNTMVGGFSAE 371
Query: 124 GRFKNAIRMFVEMVQ--DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN 181
G + +M+ + V + T+ + + C L + K++H + +K
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 431
Query: 182 VTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERD 241
V N+ + YAK G A+ VF G+R K V+S
Sbjct: 432 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNS---------------------------- 463
Query: 242 VVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIH 301
WN++I G++Q+ +L M K S L PD FT+ S LSAC+ L+ L+LGK++H
Sbjct: 464 ---WNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
+IIR +E+ YL+V++ YI G+
Sbjct: 520 GFIIRN---------------------------WLERDLFVYLSVLSL------YIHCGE 546
Query: 362 IGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSV 421
+ + +FD++ D+ +V+W ++ GY QNG A+ +FR MV G + ++ +
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 422 SSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVS 481
S L SL G++ HA AL+ ++ +LI MY+K G+I + +VFN + + T S
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTAS 665
Query: 482 WTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
W +MI+ HGL +EAI+LFE M G PD +T++GVLTAC H GL+ +G RY + MK
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 542 NVHKIKPTPSHFASMVDLLGRAGLLQEAYNFI-ENMPLEPDVVAWGSLLSACRVHKNLDL 600
+ +KP H+A ++D+LGRAG L +A + E M E DV W SLLS+CR+H+NL++
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 601 GKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQN 660
G+ A KL +EP+ Y L NLY+ GKWED +R+ M + ++K G SW+++
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 661 KVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEK 720
KV F V + + I + + + +I +MG+ PDT SV HD+ E+ K + LR HSEK
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 905
Query: 721 LAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCS 780
LA+ +GLI T E TT+R+ KNLR+C DCH+A K I K+++REIVVRD RFHHFK G+CS
Sbjct: 906 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 965
Query: 781 CRDYW 785
C DYW
Sbjct: 966 CGDYW 970
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/566 (22%), Positives = 244/566 (43%), Gaps = 95/566 (16%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G VH ++K GL VF+ N+L++FY ++ A ++FD MP + L SWN+++ ++
Sbjct: 205 IGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G + E F L+ ++ N G F +P T+ +
Sbjct: 265 DNG---FSEESFLLLGE---------MMEENGDGAF---------------MPDVATLVT 297
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL C ++ GK VH + VK L + + N+L++MY+K G A+ +F KN
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V S WN+M+ G+S G + ML
Sbjct: 358 VVS-------------------------------WNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 271 DSS-LKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+K D+ T+ + + C + L K++H Y ++ EF V NA ++ YAK G +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
AQ R+F +R + V +W A++ G+ Q
Sbjct: 447 SYAQ---------------------------------RVFHGIRSKTVNSWNALIGGHAQ 473
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
+ + +++ M G P+++T+ ++LS S L SL GK++H +R+ L V
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+++++Y G + + +F+ + + VSW ++I Q+G + A+ +F +M+ G
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I+ I+ + V AC+ + G+ + H ++ S++D+ + G + ++
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVH 595
+ E +W +++ +H
Sbjct: 652 SKVFNGLK-EKSTASWNAMIMGYGIH 676
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 203/453 (44%), Gaps = 71/453 (15%)
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
LC+ I++ YA G D + VF+ + +++ W +I +Y+ + + F+EM+
Sbjct: 121 VLCT--RIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 138 QD-QVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDE 196
+LP FT V+ +C + D+ G VH VVKTGL V V N+L++ Y G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 197 MMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNG 256
A +FD M +N+ S WNSMI +S NG
Sbjct: 239 TDALQLFDIMPERNLVS-------------------------------WNSMIRVFSDNG 267
Query: 257 YDFEALGMFANMLK---DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATG 313
+ E+ + M++ D + PD TL + L CA ++ LGK +H + ++ D
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 314 PVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLR 373
+ NAL+ Y+K G + AQ I + + NV+++ T++ G+ GD FD LR
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMVGGFSAEGD---THGTFDVLR 382
Query: 374 DRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQ 433
ML G E K + T+ + V + L K+
Sbjct: 383 Q--------MLAGGED------------------VKADEVTILNAVPVCFHESFLPSLKE 416
Query: 434 IHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV-SWTSMIVALAQH 492
+H +L+ + V+NA + Y+K G+++ A+RVF+ I R +TV SW ++I AQ
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQS 474
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACT 525
++ +M G+ PD T +L+AC+
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 177/422 (41%), Gaps = 76/422 (18%)
Query: 117 IVTYNEIGRFKNAIRMFVEMV------QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
I + E G + R E V D L + + +L + D+ G+K+H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
V SG + N D+++ + ++++ G D +
Sbjct: 110 V-----SGSTRLRN----------DDVLCTRI---------------ITMYAMCGSPDDS 139
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD + +++ WN++I+ YS+N E L F M+ + L PD FT + ACA
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 291 LEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFT 350
+ + +G +H +++T VGNAL+S Y G F
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG---------------------FV 238
Query: 351 TLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPK- 409
T A ++FD + +R++V+W +M+ + NG ++++ L M+ E
Sbjct: 239 T------------DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
Query: 410 ---PNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAA 466
P+ TL +L V + + GK +H A++ L ++NAL+ MYSK G I A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 467 RRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG--IKPDHITYVGVLTAC 524
+ +F + + + VSW +M+ + G + +ML G +K D +T + + C
Sbjct: 347 QMIFKMNN-NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 525 TH 526
H
Sbjct: 406 FH 407
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 132/287 (45%), Gaps = 23/287 (8%)
Query: 319 LISCYAKVGGVEIAQKIVEQ-SGISYL--NVIAFTTLLDGYIKIGDIGPARRIFDSLRDR 375
L+ K +E+ +KI + SG + L + + T ++ Y G +R +FD+LR +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 376 DVVAWTAMLVGYEQNGLNKDAVELFRSMVREGP-KPNNYTLSAMLSVSSSLASLDHGKQI 434
++ W A++ Y +N L + +E F M+ P+++T ++ + ++ + G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 435 HASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGL 494
H +++G + V NAL++ Y G + A ++F+++ R VSW SMI + +G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN-LVSWNSMIRVFSDNGF 268
Query: 495 GEEAIQLFERMLEL----GIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVH------ 544
EE+ L M+E PD T V VL C +R + K VH
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR-------EREIGLGKGVHGWAVKL 321
Query: 545 KIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
++ +++D+ + G + A I M +VV+W +++
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 367
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/756 (33%), Positives = 394/756 (52%), Gaps = 103/756 (13%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMN---FYAKTESISYAKKVFDEMPVKTLCSWNTILSAY 89
K +H +I LH FL N L+ F+ +T+ Y+ +F + +N++++ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTK---YSYLLFSHTQFPNIFLYNSLINGF 86
Query: 90 AKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVT 149
N + F + +F+ + + + FT
Sbjct: 87 VN-----------------------------NHL--FHETLDLFLSIRKHGLYLHGFTFP 115
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
VL +CT G +HS VVK G + V SLL++Y+
Sbjct: 116 LVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG----------------- 158
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML 269
SGRL+ A FD++ +R VVTW ++ +GY+ +G EA+ +F M+
Sbjct: 159 --------------SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 270 KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGV 329
+ +KPD + + LSAC ++ L G+ I Y+ E
Sbjct: 205 -EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM-------------------- 243
Query: 330 EIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQ 389
QK N TTL++ Y K G + AR +FDS+ ++D+V W+ M+ GY
Sbjct: 244 ---QK----------NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYAS 290
Query: 390 NGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSV 449
N K+ +ELF M++E KP+ +++ LS +SL +LD G+ + R ++L +
Sbjct: 291 NSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFM 350
Query: 450 SNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELG 509
+NALI MY+K G + VF + ++ V + I LA++G + + +F + +LG
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
I PD T++G+L C H GL++ G R++N + V+ +K T H+ MVDL GRAG+L +A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y I +MP+ P+ + WG+LLS CR+ K+ L + ++L+ +EP N+G Y L N+YS
Sbjct: 470 YRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G+W++AA +R M G+KK G+SW++++ KVH F +D HP D IY K+ + +E+
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
+ MGFVP T V DVEE+ KE++L +HSEKLA+A GLIST +R++KNLRVC DCH
Sbjct: 590 RLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCH 649
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+K I K+ REIVVRD RFH F G CSC DYW
Sbjct: 650 EVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/548 (22%), Positives = 240/548 (43%), Gaps = 107/548 (19%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKT 78
+L++ ++ + +G +H+ ++KCG + V SL++ Y+ + ++ A K+FDE+P ++
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 79 LCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ 138
+ +W + S Y GR + AI +F +MV+
Sbjct: 177 VVTWTALFSGYTTS-------------------------------GRHREAIDLFKKMVE 205
Query: 139 DQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMM 198
V P + + VL++C +GDL +G+ + ++ + + V +L+N+YAK G
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 199 AKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYD 258
A++VFD M+E+D+VTW++MI GY+ N +
Sbjct: 266 ARSVFD-------------------------------SMVEKDIVTWSTMIQGYASNSFP 294
Query: 259 FEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNA 318
E + +F ML++ +LKPD+F++ LS+CA+L L LG+ + I R EF + NA
Sbjct: 295 KEGIELFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 319 LISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVV 378
LI YAK G + +F ++++D+V
Sbjct: 354 LIDMYAKCGA---------------------------------MARGFEVFKEMKEKDIV 380
Query: 379 AWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHG-KQIHAS 437
A + G +NG K + +F + G P+ T +L + G + +A
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
+ ++ ++ ++ +AG ++ A R+ + R + W +++ +
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRL----VK 496
Query: 498 AIQLFERMLE--LGIKP-DHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA 554
QL E +L+ + ++P + YV + + GG ++ +MM N +K P +
Sbjct: 497 DTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM-NKKGMKKIPGY-- 553
Query: 555 SMVDLLGR 562
S ++L G+
Sbjct: 554 SWIELEGK 561
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 390/660 (59%), Gaps = 53/660 (8%)
Query: 136 MVQDQVLPTQFTVTSVLASCTALG-----DLSAGKKVHSFVVKTGLSGCVNVTNSLLNMY 190
+++ +VLP + +S+ + + L ++S G+ + F + N+ + +L +
Sbjct: 19 LIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNR-------NLVHEILQLC 71
Query: 191 AKVGDEMMAKAVFDGM-RLK---NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
A+ G M AKA + R+ +V+ NV+++ + G ++LAR FD M+ER +V+WN
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA-NLEKLKLGKQIHAYII 305
+MI Y++N + EAL +F M ++ K +FT++S LSAC N + L+ K++H +
Sbjct: 132 TMIGLYTRNRMESEALDIFLEM-RNEGFKFSEFTISSVLSACGVNCDALEC-KKLHCLSV 189
Query: 306 RTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPA 365
+T D LN+ T LLD Y K G I A
Sbjct: 190 KTCID---------------------------------LNLYVGTALLDLYAKCGMIKDA 216
Query: 366 RRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSL 425
++F+S++D+ V W++M+ GY QN ++A+ L+R R + N +TLS+++ S+L
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 426 ASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSM 485
A+L GKQ+HA +SG S++ V+++ + MY+K G++ + +F+ + + + W ++
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTI 335
Query: 486 IVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHK 545
I A+H +E + LFE+M + G+ P+ +T+ +L+ C H GLVE+G+R++ +M+ +
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYG 395
Query: 546 IKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAA 605
+ P H++ MVD+LGRAGLL EAY I+++P +P WGSLL++CRV+KNL+L ++AA
Sbjct: 396 LSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAA 455
Query: 606 EKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVF 665
EKL +EP+N+G + L N+Y++ +WE+ A RK ++ VKK +G SW+ I++KVH F
Sbjct: 456 EKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTF 515
Query: 666 GVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAF 725
V + HP+ I + + + + ++ G+ P LHDVE KE++L HSEKLA+ F
Sbjct: 516 SVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVF 575
Query: 726 GLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
GL+ PE++ +RIMKNLR+C DCH +K R I+VRD RFHHF G CSC D+W
Sbjct: 576 GLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 204/428 (47%), Gaps = 68/428 (15%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++AY+K G ++LA +VF+ M R VSW T+I Y A+ +F+EM +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
++FT++SVL++C D KK+H VKT + + V +LL++YAK G A V
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
F+ M+ ++ VTW+SM+AGY QN EAL
Sbjct: 220 FESMQ-------------------------------DKSSVTWSSMVAGYVQNKNYEEAL 248
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
++ + SL+ ++FTL+S + AC+NL L GKQ+HA I ++ F + V ++ +
Sbjct: 249 LLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
YAK G +L + YI IF ++++++ W
Sbjct: 308 YAKCG-----------------------SLRESYI----------IFSEVQEKNLELWNT 334
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS- 441
++ G+ ++ K+ + LF M ++G PN T S++LSV ++ G++ +R+
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTT 393
Query: 442 -GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQ 500
G + ++ + ++ + +AG ++ A + I + W S++ + + E A
Sbjct: 394 YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEV 453
Query: 501 LFERMLEL 508
E++ EL
Sbjct: 454 AAEKLFEL 461
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 149/317 (47%), Gaps = 19/317 (5%)
Query: 74 MPVKTLCSWN-----TILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+ VKT N +L YAK G + A +VF M ++ SV+W++++ Y + ++
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
A+ ++ + + QFT++SV+ +C+ L L GK++H+ + K+G V V +S ++
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQM----IERDVVT 244
MYAK G + +F ++ KN+ WN ++S R F++M + + VT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 245 WNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYI 304
++S+++ G E F M L P+ + + L + L + + I
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI---LGRAGLLSEAYELI 423
Query: 305 IRTEFDATGPV-GNALISC--YAKVGGVEI-AQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
FD T + G+ L SC Y + E+ A+K+ E + N + + + +
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483
Query: 361 DIGPARRIFDSLRDRDV 377
+I +R++ LRD DV
Sbjct: 484 EIAKSRKL---LRDCDV 497
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 337/546 (61%), Gaps = 35/546 (6%)
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI 300
+V WN++I GY++ G A ++ M ++PD T + A + ++LG+ I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 301 HAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIG 360
H+ +IR+ F + V N+L+ YA G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCG--------------------------------- 170
Query: 361 DIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLS 420
D+ A ++FD + ++D+VAW +++ G+ +NG ++A+ L+ M +G KP+ +T+ ++LS
Sbjct: 171 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLS 230
Query: 421 VSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETV 480
+ + +L GK++H ++ G +L SN L+ +Y++ G + A+ +F+ + + +V
Sbjct: 231 ACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSV 289
Query: 481 SWTSMIVALAQHGLGEEAIQLFERMLEL-GIKPDHITYVGVLTACTHGGLVEQGQRYYNM 539
SWTS+IV LA +G G+EAI+LF+ M G+ P IT+VG+L AC+H G+V++G Y+
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 540 MKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLD 599
M+ +KI+P HF MVDLL RAG +++AY +I++MP++P+VV W +LL AC VH + D
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 409
Query: 600 LGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQ 659
L + A ++L +EP++SG Y L N+Y+S +W D IRK M GVKK G S V++
Sbjct: 410 LAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVG 469
Query: 660 NKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSE 719
N+VH F + D HPQ DAIY K+ ++ ++ G+VP ++V DVEE+ KE + +HSE
Sbjct: 470 NRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 529
Query: 720 KLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLC 779
K+AIAF LISTPE + + ++KNLRVC DCH AIK + K+ +REIVVRD +RFHHFK G C
Sbjct: 530 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSC 589
Query: 780 SCRDYW 785
SC+DYW
Sbjct: 590 SCQDYW 595
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 181/406 (44%), Gaps = 72/406 (17%)
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEM-VQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFV 171
W T+I Y EIG +A ++ EM V V P T ++ + T + D+ G+ +HS V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 172 VKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLAR 231
+++G + V NSLL++YA GD A VFD M K++ +WN
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN---------------- 191
Query: 232 AQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANL 291
S+I G+++NG EAL ++ M +KPD FT+ S LSACA +
Sbjct: 192 ---------------SVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKI 235
Query: 292 EKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTT 351
L LGK++H Y+I+ N L+ YA+ G VE
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE--------------------- 274
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSM-VREGPKP 410
A+ +FD + D++ V+WT+++VG NG K+A+ELF+ M EG P
Sbjct: 275 ------------EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 411 NNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSN--ALITMYSKAGNINAARR 468
T +L S + G + + +R + + ++ + ++AG + A
Sbjct: 323 CEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 469 VFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDH 514
+ + V W +++ A H G+ + F R+ L ++P+H
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPNH 425
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 160/351 (45%), Gaps = 72/351 (20%)
Query: 16 YAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMP 75
Y L+++ + +G+ +H+ +I+ G ++++NSL++ YA ++ A K
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYK------ 177
Query: 76 VKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVE 135
VF+ MP +D V+W ++I + E G+ + A+ ++ E
Sbjct: 178 -------------------------VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 136 MVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGD 195
M + P FT+ S+L++C +G L+ GK+VH +++K GL+ ++ +N LL++YA+ G
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 196 EMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQN 255
AK +FD +M++++ V+W S+I G + N
Sbjct: 273 VEEAKTLFD-------------------------------EMVDKNSVSWTSLIVGLAVN 301
Query: 256 GYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLG-----KQIHAYIIRTEFD 310
G+ EA+ +F M L P + T L AC++ +K G + Y I +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 311 ATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGD 361
G ++ A+ G V+ A + ++ + NV+ + TLL GD
Sbjct: 362 HFG----CMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACTVHGD 407
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 68/330 (20%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+GK VH +IK GL ++ N L++ YA+ + AK +FDEM K SW +++ A
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
G A E+F M + + +LP + T
Sbjct: 300 VNGFGKEAIELFKYMESTEG------------------------------LLPCEITFVG 329
Query: 151 VLASCTALGDLSAG-------KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVF 203
+L +C+ G + G ++ + + GC ++++ A+ G A
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC------MVDLLARAGQVKKAYEYI 383
Query: 204 DGMRLK-NVSSWNVVV---SLHIHSGRLDLARAQFDQMIER---DVVTWNSMIAGYSQNG 256
M ++ NV W ++ ++H S + AR Q Q+ D V ++M A Q
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS-EQRW 442
Query: 257 YDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVG 316
D + + ML+D K +L +++G ++H +++ D + P
Sbjct: 443 SDVQKIR--KQMLRDGVKKVPGHSL------------VEVGNRVHEFLMG---DKSHPQS 485
Query: 317 NALISCYAKVGGVEIAQKIVEQSGISYLNV 346
+A+ + ++ G ++ V Q Y++V
Sbjct: 486 DAIYAKLKEMTGRLRSEGYVPQISNVYVDV 515
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 67/271 (24%)
Query: 425 LASLDHGKQIHASALRSGEASSLSVSNA---------LITMYSKAGNINAARRVFNLIHW 475
++S+ +QIHA ++R G +S+S+A L+++ S ++ A +VF+ I
Sbjct: 27 VSSITKLRQIHAFSIRHG----VSISDAELGKHLIFYLVSLPSPP-PMSYAHKVFSKIEK 81
Query: 476 RQETVSWTSMIVALAQHGLGEEAIQLFERMLELG-IKPDHITYVGVLTACTHGGLVEQGQ 534
W ++I A+ G A L+ M G ++PD TY ++ A T V G+
Sbjct: 82 PINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGE 141
Query: 535 RYYNMMKNVHKIKPTPSHFASMV-------DLLGRAGLLQEAYNFIENMPLEPDVVAWG- 586
++++ S F S++ L G + AY + MP E D+VAW
Sbjct: 142 TIHSVV--------IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNS 192
Query: 587 ----------------------------------SLLSACRVHKNLDLGKIAAEKLLLIE 612
SLLSAC L LGK ++ +
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 613 -PDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
N + + L +LY+ CG+ E+A + M
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/623 (36%), Positives = 349/623 (56%), Gaps = 68/623 (10%)
Query: 165 KKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHS 224
KK+H+ V++TG S ++ LL +GD A+ VFD M H
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM----------------HK 71
Query: 225 GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLAST 284
R+ L WN++ GY +N FE+L ++ M +D ++PD+FT
Sbjct: 72 PRIFL---------------WNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFV 115
Query: 285 LSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYL 344
+ A + L G +HA++++ F G V L+ Y
Sbjct: 116 VKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMY--------------------- 154
Query: 345 NVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMV 404
+K G++ A +F+S++ +D+VAW A L Q G + A+E F M
Sbjct: 155 ------------MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 405 REGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
+ + +++T+ +MLS L SL+ G++I+ A + ++ V NA + M+ K GN
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
AAR +F + R VSW++MIV A +G EA+ LF M G++P+++T++GVL+AC
Sbjct: 263 AARVLFEEMKQRN-VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 525 THGGLVEQGQRYYNMM--KNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDV 582
+H GLV +G+RY+++M N ++P H+A MVDLLGR+GLL+EAY FI+ MP+EPD
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 583 VAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSM 642
WG+LL AC VH+++ LG+ A+ L+ PD + L N+Y++ GKW+ +R M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 643 KYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVL 702
+ +G KK +S V+ + K+H F D HPQ AIY K+ +I +I++MG+VPDT SV
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Query: 703 HDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDRE 762
HDVE + KE L HHSEKLAIAFGLI +R+MKNLR C+DCH+ KF+ L E
Sbjct: 502 HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTE 561
Query: 763 IVVRDATRFHHFKKGLCSCRDYW 785
I++RD RFHHF+ G+CSC+++W
Sbjct: 562 IIMRDKNRFHHFRNGVCSCKEFW 584
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 219/517 (42%), Gaps = 134/517 (25%)
Query: 11 SPL--EFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+PL + + LL+++ S P K +HA +++ G L L+ + YA+
Sbjct: 6 TPLTKQMLSELLRAS--SSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYAR 63
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+VFDEM + WNT+ Y + N +P
Sbjct: 64 QVFDEMHKPRIFLWNTLFKGYVR-----------NQLPF--------------------E 92
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVN-VTNSLL 187
++ ++ +M V P +FT V+ + + LGD S G +H+ VVK G GC+ V L+
Sbjct: 93 SLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF-GCLGIVATELV 151
Query: 188 NMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
MY K G+ A+ +F+ M++K++ +WN +++ + +G NS
Sbjct: 152 MMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG--------------------NS 191
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
I AL F M D +++ D FT+ S LSAC L L++G++I+ +
Sbjct: 192 AI-----------ALEYFNKMCAD-AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
E D V NA + + K G E A+ + E+ + NV++++T++ GY
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEE--MKQRNVVSWSTMIVGY----------- 286
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
AM NG +++A+ LF +M EG +PN T +LS S
Sbjct: 287 --------------AM------NGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
++ GK+ + ++S + + + R+E + M+
Sbjct: 327 VNEGKRYFSLMVQSNDKN---------------------------LEPRKE--HYACMVD 357
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
L + GL EEA + ++M ++PD + +L AC
Sbjct: 358 LLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGAC 391
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 64/299 (21%)
Query: 10 ISPLEFYAHLLQSNLKSRNPF-VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAK 68
+ P EF + + F G +HA ++K G + L+ Y K +S A+
Sbjct: 105 VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAE 164
Query: 69 KVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKN 128
+F+ M VK L +WN L+ + G +A E FN
Sbjct: 165 FLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN------------------------- 199
Query: 129 AIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLN 188
+M D V FTV S+L++C LG L G++++ K + + V N+ L+
Sbjct: 200 ------KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 189 MYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSM 248
M+ K G+ A+ +F+ M+ +N VV+W++M
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRN-------------------------------VVSWSTM 282
Query: 249 IAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
I GY+ NG EAL +F M ++ L+P+ T LSAC++ + GK+ + ++++
Sbjct: 283 IVGYAMNGDSREALTLFTTM-QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 54/326 (16%)
Query: 264 MFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCY 323
M + +L+ SS KP + K+IHA ++RT F N+L+
Sbjct: 12 MLSELLRASSSKPKQL------------------KKIHAIVLRTGFSEK----NSLL--- 46
Query: 324 AKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAM 383
T LL+ + IGD+ AR++FD + + W +
Sbjct: 47 --------------------------TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTL 80
Query: 384 LVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGE 443
GY +N L +++ L++ M G +P+ +T ++ S L G +HA ++ G
Sbjct: 81 FKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF 140
Query: 444 ASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFE 503
V+ L+ MY K G +++A +F + + + V+W + + Q G A++ F
Sbjct: 141 GCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 504 RMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRA 563
+M ++ D T V +L+AC G +E G+ Y+ + +I + +D+ +
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK-EEIDCNIIVENARLDMHLKC 258
Query: 564 GLLQEAYNFIENMPLEPDVVAWGSLL 589
G + A E M + +VV+W +++
Sbjct: 259 GNTEAARVLFEEMK-QRNVVSWSTMI 283
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ ++ R K + ++ ++N+ ++ + K + A+ +F+EM + + SW+T++ YA
Sbjct: 228 IGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYA 287
Query: 91 KQGRLDLACEVFNLMPNR----DSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQF 146
G A +F M N + V++ ++ + G R F MVQ +
Sbjct: 288 MNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEP 347
Query: 147 TVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGM 206
LG ++ + F+ K + + +LL A D ++ + V D +
Sbjct: 348 RKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVL 407
Query: 207 --RLKNVSSWNVVVS-LHIHSGR---LDLARAQFDQMIERDVVTWNSM 248
++ S++V++S ++ +G+ +D R++ ++ + V ++S+
Sbjct: 408 VETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/704 (34%), Positives = 372/704 (52%), Gaps = 67/704 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV-QDQV 141
N++++ Y K A ++F+LMP R+ VSW ++ Y G +++F M +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +F T V SC+ G + GK+ H +K GL V N+L+ MY+ A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
V D + ++S ++ +S ++ G + D V WN++
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNL------------- 238
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
T S+L +NL L L Q+H+ ++R F+A ALI+
Sbjct: 239 ------------------TYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y K G V AQ R+FD +++ T
Sbjct: 281 MYGKCGKVLYAQ---------------------------------RVFDDTHAQNIFLNT 307
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
++ Y Q+ ++A+ LF M + PN YT + +L+ + L+ L G +H L+S
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS 367
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
G + + V NAL+ MY+K+G+I AR+ F+ + +R + V+W +MI + HGLG EA++
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEA 426
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLG 561
F+RM+ G P+ IT++GVL AC+H G VEQG Y+N + ++P H+ +V LL
Sbjct: 427 FDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486
Query: 562 RAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSA 621
+AG+ ++A +F+ P+E DVVAW +LL+AC V +N LGK AE + P++SG Y
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVL 546
Query: 622 LCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNK 681
L N+++ +WE A +R M GVKK G SW+ I+N+ HVF ED HP+ IY K
Sbjct: 547 LSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAK 606
Query: 682 MAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKN 741
+ ++ +IK +G+ PD A HDV+E+ +E L +HSEKLA+A+GLI TPE + L + KN
Sbjct: 607 VKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKN 666
Query: 742 LRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+R+C+DCHSAIK I K+ R IV+RD+ RFHHF G CSC DYW
Sbjct: 667 VRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 196/420 (46%), Gaps = 43/420 (10%)
Query: 190 YAKVGDEMMAKAVFDGM--RLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNS 247
Y ++G+ + A + R ++ N +++L++ AR FD M ER+VV+W +
Sbjct: 46 YLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 248 MIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRT 307
M+ GY +G+DFE L +F +M +P++F +C+N +++ GKQ H ++
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 308 EFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARR 367
+ V N L+ Y+ G A ++++ + Y ++ F++ L GY++ G
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDD--LPYCDLSVFSSALSGYLECGAF----- 218
Query: 368 IFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLAS 427
K+ +++ R E NN T + L + S+L
Sbjct: 219 --------------------------KEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 428 LDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIV 487
L+ Q+H+ +R G + + ALI MY K G + A+RVF+ H Q T+++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTH-AQNIFLNTTIMD 311
Query: 488 ALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNM-MKNVHKI 546
A Q EEA+ LF +M + P+ T+ +L + L++QG + + +K+ ++
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 547 KPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAE 606
+ ++V++ ++G +++A M D+V W +++S C H LG+ A E
Sbjct: 372 HVMVGN--ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHH---GLGREALE 425
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 184/458 (40%), Gaps = 97/458 (21%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK H +K GL F++N+L+ Y+ A +V D++P L +++ LS Y +
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSV 151
G +V N D V W + + +++R+F
Sbjct: 215 CGAFKEGLDVLRKTANEDFV-WNNLT--------YLSSLRLF------------------ 247
Query: 152 LASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNV 211
+ L DL+ +VHS +V+ G + V +L+NMY K G + A+ VFD +N
Sbjct: 248 ----SNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQN- 302
Query: 212 SSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
+ +++ Y Q+ EAL +F+ M
Sbjct: 303 ------------------------------IFLNTTIMDAYFQDKSFEEALNLFSKM-DT 331
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
+ P+++T A L++ A L LK G +H ++++ + VGNAL++ YAK G +E
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
A+K SG+++ RD+V W M+ G +G
Sbjct: 392 ARKAF--SGMTF-------------------------------RDIVTWNTMISGCSHHG 418
Query: 392 LNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEAS-SLSVS 450
L ++A+E F M+ G PN T +L S + ++ G ++ + +
Sbjct: 419 LGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY 478
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVA 488
++ + SKAG A + V+W +++ A
Sbjct: 479 TCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 42/277 (15%)
Query: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESI 64
N + +S L +++L NL + VH+R+++ G + V +L+N Y K +
Sbjct: 236 NNLTYLSSLRLFSNLRDLNLALQ-------VHSRMVRFGFNAEVEACGALINMYGKCGKV 288
Query: 65 SYAKKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIG 124
YA++VFD+ + + TI+ AY +
Sbjct: 289 LYAQRVFDDTHAQNIFLNTTIMDAYFQD-------------------------------K 317
Query: 125 RFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTN 184
F+ A+ +F +M +V P ++T +L S L L G +H V+K+G V V N
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 185 SLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIER---- 240
+L+NMYAK G A+ F GM +++ +WN ++S H G A FD+MI
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 241 DVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPD 277
+ +T+ ++ S G+ + L F ++K ++PD
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 32/242 (13%)
Query: 281 LASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSG 340
L L CAN L++G+ IHA++I T + E A +I
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTN----------------QSSRAEDAYQI----- 72
Query: 341 ISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELF 400
+L++ Y+K + AR++FD + +R+VV+W AM+ GY+ +G + + ++LF
Sbjct: 73 ---------NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLF 123
Query: 401 RSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSK 459
+SM G +PN + + + S+ ++ GKQ H L+ G S V N L+ MYS
Sbjct: 124 KSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSL 183
Query: 460 AGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVG 519
A RV + + + +V ++S + + G +E + + + +++TY+
Sbjct: 184 CSGNGEAIRVLDDLPYCDLSV-FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLS 242
Query: 520 VL 521
L
Sbjct: 243 SL 244
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 349/598 (58%), Gaps = 46/598 (7%)
Query: 230 ARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACA 289
AR FD++ ER+V+ N MI Y NG+ E + +F M +++PD +T L AC+
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACS 151
Query: 290 NLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAF 349
+ +G++IH + +T VGN L+S Y K G + A+ ++++ +S +V+++
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE--MSRRDVVSW 209
Query: 350 TTLLDGY------------------IKIG-DIG------PA------------RRIFDSL 372
+L+ GY +KI D G PA + +F +
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 373 RDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGK 432
+ +V+W M+ Y +N + +AVEL+ M +G +P+ +++++L ++L GK
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 433 QIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH 492
+IH R +L + NALI MY+K G + AR VF + R + VSWT+MI A
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISAYGFS 388
Query: 493 GLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSH 552
G G +A+ LF ++ + G+ PD I +V L AC+H GL+E+G+ + +M + +KI P H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 553 FASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIE 612
A MVDLLGRAG ++EAY FI++M +EP+ WG+LL ACRVH + D+G +AA+KL +
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 613 PDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLH 672
P+ SG Y L N+Y+ G+WE+ NIR MK G+KK G S V++ +H F V D H
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 673 PQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPE 732
PQ D IY ++ + ++KE+G+VPD+ S LHDVEE+ KE L HSEKLAI F L++T E
Sbjct: 569 PQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKE 628
Query: 733 -----NTTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
N T+RI KNLR+C DCH A K I ++ REI++RD RFH F+ G+CSC DYW
Sbjct: 629 EEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/549 (24%), Positives = 222/549 (40%), Gaps = 106/549 (19%)
Query: 33 KLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQ 92
+ VH+RII L + L LM YA + ++ A+KVFDE+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEI------------------ 100
Query: 93 GRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVL 152
P R+ + +I +Y G + +++F M V P +T VL
Sbjct: 101 -------------PERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 153 ASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVS 212
+C+ G + G+K+H K GLS + V N L++MY K G A+ V D M ++V
Sbjct: 148 KACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV 207
Query: 213 SWNVVVSLHIHSGRLDLA-------------------------------------RAQFD 235
SWN +V + + R D A + F
Sbjct: 208 SWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFF 267
Query: 236 QMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLK 295
+M ++ +V+WN MI Y +N EA+ +++ M D +PD ++ S L AC + L
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALS 326
Query: 296 LGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDG 355
LGK+IH YI R + + NALI YAK G +E
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE------------------------- 361
Query: 356 YIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTL 415
AR +F++++ RDVV+WTAM+ Y +G DAV LF + G P++
Sbjct: 362 --------KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 416 SAMLSVSSSLASLDHGKQIHASALRSGEASS-LSVSNALITMYSKAGNINAARRVFNLIH 474
L+ S L+ G+ + + L ++ + +AG + A R +
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Query: 475 WRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC-THGGLVEQG 533
W +++ A H + + +++ +L P+ Y +L+ G E+
Sbjct: 474 MEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA--PEQSGYYVLLSNIYAKAGRWEEV 531
Query: 534 QRYYNMMKN 542
N+MK+
Sbjct: 532 TNIRNIMKS 540
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 44/361 (12%)
Query: 352 LLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPN 411
L+ Y + D+ AR++FD + +R+V+ M+ Y NG + V++F +M +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 412 NYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFN 471
+YT +L S ++ G++IH SA + G +S+L V N L++MY K G ++ AR V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 472 LIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTA---CTHGG 528
+ R++ VSW S++V AQ+ ++A+++ M + I D T +L A T
Sbjct: 200 EMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 529 LVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA---YNFIENMPLEPDVVAW 585
++ ++ M K + + M+ + + + EA Y+ +E EPD V+
Sbjct: 259 VMYVKDMFFKMGKK------SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 586 GSLLSACRVHKNLDLGK-----IAAEKL---LLIEPDNSGAYSALCNLYSSCGKWEDAAN 637
S+L AC L LGK I +KL LL+E +AL ++Y+ CG E A +
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE-------NALIDMYAKCGCLEKARD 365
Query: 638 IRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPD 697
+ ++MK V SW + + +G + DA+ ++ ++++ G VPD
Sbjct: 366 VFENMKSRDV-----VSWTAM---ISAYG---FSGRGCDAV-----ALFSKLQDSGLVPD 409
Query: 698 T 698
+
Sbjct: 410 S 410
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 69/305 (22%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +H K GL ++F+ N L++ Y K +S A+ V DEM + + SWN+++ YA
Sbjct: 158 IGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 91 KQGRLDLACEV-------------------------------------FNLMPNRDSVSW 113
+ R D A EV F M + VSW
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSW 277
Query: 114 TTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVK 173
+I Y + A+ ++ M D P ++TSVL +C LS GKK+H ++ +
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337
Query: 174 TGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQ 233
L + + N+L++MYAK G A+ VF+ M+ ++V SW
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW------------------- 378
Query: 234 FDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEK 293
+MI+ Y +G +A+ +F+ L+DS L PD +TL+AC++
Sbjct: 379 ------------TAMISAYGFSGRGCDAVALFSK-LQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 294 LKLGK 298
L+ G+
Sbjct: 426 LEEGR 430
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 24 LKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCS-- 81
+K+ P +++R+ G S++ T ++S KK+ + K L
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 82 --WNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD 139
N ++ YAK G L+ A +VF M +RD VSWT +I Y GR +A+ +F ++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 140 QVLPTQFTVTSVLASCTALGDLSAGK 165
++P + LA+C+ G L G+
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGR 430
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/770 (32%), Positives = 403/770 (52%), Gaps = 100/770 (12%)
Query: 19 LLQSNLKSRNPFVGKLVHARIIKC-GLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVK 77
LL++ + + + +G++VHARI+K FL N L+N Y+K +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLD--------------- 56
Query: 78 TLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMV 137
+ + RL V L P R+ VSWT++I + G F A+ F EM
Sbjct: 57 -----------HPESARL-----VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR 100
Query: 138 QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEM 197
++ V+P FT + +L GK++H+ VK G V V S +MY K
Sbjct: 101 REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT---- 156
Query: 198 MAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGY 257
RL+ D AR FD++ ER++ TWN+ I+ +G
Sbjct: 157 ---------RLR------------------DDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 258 DFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGN 317
EA+ F + P+ T + L+AC++ L LG Q+H ++R+ FD V N
Sbjct: 190 PREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 318 ALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDV 377
LI Y K K + S I IF + ++
Sbjct: 249 GLIDFYGKC-------KQIRSSEI--------------------------IFTEMGTKNA 275
Query: 378 VAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS 437
V+W +++ Y QN ++ A L+ ++ + +++ +S++LS + +A L+ G+ IHA
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 438 ALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEE 497
A+++ ++ V +AL+ MY K G I + + F+ + + V+ S+I A G +
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDM 394
Query: 498 AIQLFERMLELGI--KPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFAS 555
A+ LFE M G P+++T+V +L+AC+ G VE G + ++ M++ + I+P H++
Sbjct: 395 ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSC 454
Query: 556 MVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDN 615
+VD+LGRAG+++ AY FI+ MP++P + WG+L +ACR+H LG +AAE L ++P +
Sbjct: 455 IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKD 514
Query: 616 SGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQR 675
SG + L N +++ G+W +A +R+ +K VG+KK G+SW+ ++N+VH F +D H
Sbjct: 515 SGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILN 574
Query: 676 DAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTT 735
I +AK+ +E++ G+ PD L+D+EE+ K + HHSEKLA+AFGL+S P +
Sbjct: 575 KEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVP 634
Query: 736 LRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+RI KNLR+C DCHS KF+ V REI+VRD RFH FK G+CSC+DYW
Sbjct: 635 IRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/576 (39%), Positives = 343/576 (59%), Gaps = 15/576 (2%)
Query: 217 VVSLHIHS-----GRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKD 271
V++L +H G++ + A F Q I+ D+ + + I S NG +A ++ +L
Sbjct: 65 VLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL-S 123
Query: 272 SSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEI 331
S + P++FT +S L +C+ K GK IH ++++ V L+ YAK G V
Sbjct: 124 SEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 332 AQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNG 391
AQK+ ++ + ++++ T ++ Y K G++ AR +FDS+ +RD+V+W M+ GY Q+G
Sbjct: 180 AQKVFDR--MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHG 237
Query: 392 LNKDAVELFRSMVREG-PKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
DA+ LF+ ++ EG PKP+ T+ A LS S + +L+ G+ IH S ++ V
Sbjct: 238 FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVC 297
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLEL-G 509
LI MYSK G++ A VFN R++ V+W +MI A HG ++A++LF M + G
Sbjct: 298 TGLIDMYSKCGSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITG 356
Query: 510 IKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEA 569
++P IT++G L AC H GLV +G R + M + IKP H+ +V LLGRAG L+ A
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Query: 570 YNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSC 629
Y I+NM ++ D V W S+L +C++H + LGK AE L+ + NSG Y L N+Y+S
Sbjct: 417 YETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASV 476
Query: 630 GKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEI 689
G +E A +R MK G+ K G S ++I+NKVH F D H + IY + KI + I
Sbjct: 477 GDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536
Query: 690 KEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCH 749
K G+VP+T +VL D+EE KEQ L+ HSE+LAIA+GLIST + L+I KNLRVC+DCH
Sbjct: 537 KSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCH 596
Query: 750 SAIKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785
+ K I K+ R+IV+RD RFHHF G CSC D+W
Sbjct: 597 TVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 223/459 (48%), Gaps = 46/459 (10%)
Query: 88 AYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFT 147
AYA G++ + +F+ + D +T I T + G A ++V+++ ++ P +FT
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 148 VTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMR 207
+S+L SC+ +GK +H+ V+K GL V L+++YAK GD + A+ VFD M
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 208 LKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFAN 267
+++ S +++ + G ++ ARA FD M ERD+V+WN MI GY+Q+G+ +AL +F
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 268 MLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
+L + KPD+ T+ + LSAC+ + L+ G+ IH ++ + V LI Y+K G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E A +F+ +D+VAW AM+ GY
Sbjct: 309 SLE---------------------------------EAVLVFNDTPRKDIVAWNAMIAGY 335
Query: 388 EQNGLNKDAVELFRSMVR-EGPKPNNYTLSAMLSVSSSLASLDHGKQIHAS-ALRSGEAS 445
+G ++DA+ LF M G +P + T L + ++ G +I S G
Sbjct: 336 AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 446 SLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHG---LGEEAIQLF 502
+ L+++ +AG + A ++ ++V W+S++ + HG LG+E +
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE---IA 452
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMK 541
E ++ L IK I YV + G E + N+MK
Sbjct: 453 EYLIGLNIKNSGI-YVLLSNIYASVGDYEGVAKVRNLMK 490
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 167/336 (49%), Gaps = 44/336 (13%)
Query: 8 SLISPLEFYAHLLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYA 67
S I+P EF S LKS + GKL+H ++K GL + ++ L++ YAK + A
Sbjct: 124 SEINPNEF---TFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSA 180
Query: 68 KKVFDEMPVKTLCSWNTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFK 127
+KVFD MP ++L S +++ YAKQG ++ A +F+ M RD VSW +I Y + G
Sbjct: 181 QKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPN 240
Query: 128 NAIRMFVEMV-QDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSL 186
+A+ +F +++ + + P + TV + L++C+ +G L G+ +H FV + + V V L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 187 LNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWN 246
++MY+K G A VF+ K++ +W N
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAW-------------------------------N 329
Query: 247 SMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQI-----H 301
+MIAGY+ +GY +AL +F M + L+P T TL ACA+ + G +I
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 302 AYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVE 337
Y I+ + + G L+S + G ++ A + ++
Sbjct: 390 EYGIKPKIEHYG----CLVSLLGRAGQLKRAYETIK 421
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 370/681 (54%), Gaps = 76/681 (11%)
Query: 111 VSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSF 170
+S +I + + G+ K AIR+ + + P+Q T ++ C LS +VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 171 VVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLA 230
++ G + L+ MY+ +G +D A
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGS-------------------------------VDYA 131
Query: 231 RAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACAN 290
R FD+ +R + WN++ + G+ E LG++ M + ++ D+FT L AC
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVA 190
Query: 291 LE----KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNV 346
E L GK+IHA++ R + + +V
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSS---------------------------------HV 217
Query: 347 IAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVRE 406
TTL+D Y + G + A +F + R+VV+W+AM+ Y +NG +A+ FR M+RE
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 407 --GPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNIN 464
PN+ T+ ++L +SLA+L+ GK IH LR G S L V +AL+TMY + G +
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 465 AARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTAC 524
+RVF+ +H R + VSW S+I + HG G++AIQ+FE ML G P +T+V VL AC
Sbjct: 338 VGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 525 THGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVA 584
+H GLVE+G+R + M H IKP H+A MVDLLGRA L EA +++M EP
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 585 WGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKY 644
WGSLL +CR+H N++L + A+ +L +EP N+G Y L ++Y+ W++ ++K +++
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 645 VGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHD 704
G++K G W++++ K++ F D +P + I+ + K+ +++KE G++P T VL++
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576
Query: 705 VEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNLRVCNDCHSAIKFICKLVDREIV 764
+E + KE+++ HSEKLA+AFGLI+T + +RI KNLR+C DCH KFI K +++EI+
Sbjct: 577 LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636
Query: 765 VRDATRFHHFKKGLCSCRDYW 785
VRD RFH FK G+CSC DYW
Sbjct: 637 VRDVNRFHRFKNGVCSCGDYW 657
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 207/485 (42%), Gaps = 105/485 (21%)
Query: 35 VHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAKQGR 94
VH I+ G FL L+ Y+ S+ YA+KVFD+ +T+ WN + A G
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 95 LDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLAS 154
+ EV L W N IG V +FT T VL +
Sbjct: 159 GE---EVLGLY-------WKM-----NRIG----------------VESDRFTYTYVLKA 187
Query: 155 CTA----LGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
C A + L GK++H+ + + G S V + +L++MYA+ G A VF GM ++N
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANML- 269
V SW ++MIA Y++NG FEAL F M+
Sbjct: 248 VVSW-------------------------------SAMIACYAKNGKAFEALRTFREMMR 276
Query: 270 --KDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVG 327
KDSS P+ T+ S L ACA+L L+ GK IH YI+R D+ PV +AL++ Y + G
Sbjct: 277 ETKDSS--PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCG 334
Query: 328 GVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGY 387
+E+ Q R+FD + DRDVV+W +++ Y
Sbjct: 335 KLEVGQ---------------------------------RVFDRMHDRDVVSWNSLISSY 361
Query: 388 EQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS-GEASS 446
+G K A+++F M+ G P T ++L S ++ GK++ + R G
Sbjct: 362 GVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Query: 447 LSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLFERML 506
+ ++ + +A ++ A ++ + W S++ + HG E A + R+
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Query: 507 ELGIK 511
L K
Sbjct: 482 ALEPK 486
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 44/311 (14%)
Query: 32 GKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYAK 91
GK +HA + + G V++ +L++ YA+ + YA VF MPV+ + SW+ +++ YAK
Sbjct: 201 GKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 92 QGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQD--QVLPTQFTVT 149
G+ A E A+R F EM+++ P T+
Sbjct: 261 NGK---AFE----------------------------ALRTFREMMRETKDSSPNSVTMV 289
Query: 150 SVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLK 209
SVL +C +L L GK +H ++++ GL + V ++L+ MY + G + + VFD M +
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 210 NVSSWNVVVSLHIHSGRLDLARAQFDQMIERDV----VTWNSMIAGYSQNGYDFEALGMF 265
+V SWN ++S + G A F++M+ VT+ S++ S G E +F
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 266 ANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPV--GNALISCY 323
M +D +KP A + +L ++ +RTE GP G+ L SC
Sbjct: 410 ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKM-VQDMRTE---PGPKVWGSLLGSCR 465
Query: 324 AKVGGVEIAQK 334
G VE+A++
Sbjct: 466 IH-GNVELAER 475
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/701 (34%), Positives = 375/701 (53%), Gaps = 69/701 (9%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVL 142
N +++ Y K G + A +F+ MP RD +SW +I Y E G + +F M V
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Query: 143 PTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAV 202
P T+TSV+++C LGD G+ +H++V+ TG + ++V NSL MY G
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG-------- 346
Query: 203 FDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEAL 262
SW A F +M +D+V+W +MI+GY N +A+
Sbjct: 347 ----------SWRE-------------AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 263 GMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISC 322
+ M+ S+KPD+ T+A+ LSACA L L G ++H I+
Sbjct: 384 DTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL------------- 429
Query: 323 YAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTA 382
ISY VI L++ Y K I A IF ++ ++V++WT+
Sbjct: 430 ------------------ISY--VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTS 469
Query: 383 MLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSG 442
++ G N +A+ R M + +PN TL+A L+ + + +L GK+IHA LR+G
Sbjct: 470 IIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 443 EASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQLF 502
+ NAL+ MY + G +N A FN +++ SW ++ ++ G G ++LF
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDVTSWNILLTGYSERGQGSMVVELF 586
Query: 503 ERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFASMVDLLGR 562
+RM++ ++PD IT++ +L C+ +V QG Y++ M++ + + P H+A +VDLLGR
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGR 645
Query: 563 AGLLQEAYNFIENMPLEPDVVAWGSLLSACRVHKNLDLGKIAAEKLLLIEPDNSGAYSAL 622
AG LQEA+ FI+ MP+ PD WG+LL+ACR+H +DLG+++A+ + ++ + G Y L
Sbjct: 646 AGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILL 705
Query: 623 CNLYSSCGKWEDAANIRKSMKYVGVKKTQGFSWVQIQNKVHVFGVEDWLHPQRDAIYNKM 682
CNLY+ CGKW + A +R+ MK G+ G SWV+++ KVH F +D HPQ I +
Sbjct: 706 CNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
Query: 683 AKIWDEIKEMGFVPDTASVLHDVEEDVKEQMLRHHSEKLAIAFGLISTPENTTLRIMKNL 742
++++ E+G + S D E ++++ HSE+ AIAFGLI+T + + KNL
Sbjct: 766 EGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNL 825
Query: 743 RVCNDCHSAIKFICKLVDREIVVRDATRFHHFKKGLCSCRD 783
+C +CH +KFI K V REI VRDA FHHFK G CSC D
Sbjct: 826 SMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 246/512 (48%), Gaps = 75/512 (14%)
Query: 83 NTILSAYAKQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQ-DQV 141
N L+ + + G L A VF M R+ SW ++ Y + G F A+ ++ M+ V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 142 LPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKA 201
P +T VL +C + DL+ GK+VH VV+ G ++V N+L+ MY K GD
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD------ 246
Query: 202 VFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEA 261
+ AR FD+M RD+++WN+MI+GY +NG E
Sbjct: 247 -------------------------VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEG 281
Query: 262 LGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALIS 321
L +F M + S+ PD TL S +SAC L +LG+ IHAY+I T F V N+L
Sbjct: 282 LELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 322 CYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWT 381
Y G A+K+ F + +D+V+WT
Sbjct: 341 MYLNAGSWREAEKL---------------------------------FSRMERKDIVSWT 367
Query: 382 AMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRS 441
M+ GYE N L A++ +R M ++ KP+ T++A+LS ++L LD G ++H A+++
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 442 GEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQHGLGEEAIQL 501
S + V+N LI MYSK I+ A +F+ I R+ +SWTS+I L + EA+ +
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNRCFEAL-I 485
Query: 502 FERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNVHKIKPTPSHFA--SMVDL 559
F R +++ ++P+ IT L AC G + G+ + +V + F +++D+
Sbjct: 486 FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIH---AHVLRTGVGLDDFLPNALLDM 542
Query: 560 LGRAGLLQEAYNFIENMPLEPDVVAWGSLLSA 591
R G + A++ + + DV +W LL+
Sbjct: 543 YVRCGRMNTAWSQFNSQ--KKDVTSWNILLTG 572
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 222/472 (47%), Gaps = 67/472 (14%)
Query: 124 GRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVVKTGLSGCVNVT 183
G+ + A+++ M + +V + +++ C G KV+S + + S V +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 184 NSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARAQFDQMIERDVV 243
N+ L M+ + G+ V +W V F +M ER++
Sbjct: 133 NAFLAMFVRFGNL--------------VDAWYV-----------------FGKMSERNLF 161
Query: 244 TWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLEKLKLGKQIHAY 303
+WN ++ GY++ GY EA+ ++ ML +KPD +T L C + L GK++H +
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 304 IIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIG 363
++R ++ V NALI+ Y +K GD+
Sbjct: 222 VVRYGYELDIDVVNALITMY---------------------------------VKCGDVK 248
Query: 364 PARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNNYTLSAMLSVSS 423
AR +FD + RD+++W AM+ GY +NG+ + +ELF +M P+ TL++++S
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 424 SLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNLIHWRQETVSWT 483
L G+ IHA + +G A +SV N+L MY AG+ A ++F+ + R++ VSWT
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWT 367
Query: 484 SMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQGQRYYNMMKNV 543
+MI + L ++AI + M + +KPD IT VL+AC G ++ G + +
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 544 HKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSACRVH 595
I +++++ + + +A + N+P +V++W S+++ R++
Sbjct: 428 RLISYVIVA-NNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 200/477 (41%), Gaps = 102/477 (21%)
Query: 31 VGKLVHARIIKCGLHLSVFLKNSLMNFYAKTESISYAKKVFDEMPVKTLCSWNTILSAYA 90
+G+ +HA +I G + + + NSL Y S A+K+F M K + SW T++S Y
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 91 KQGRLDLACEVFNLMPNRDSVSWTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTS 150
+N +P++ AI + M QD V P + TV +
Sbjct: 375 -----------YNFLPDK--------------------AIDTYRMMDQDSVKPDEITVAA 403
Query: 151 VLASCTALGDLSAGKKVHSFVVKTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKN 210
VL++C LGDL G ++H +K L V V N+L+NMY+K A +F + KN
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463
Query: 211 VSSWNVVVSLHIHSGRLDLARAQFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLK 270
V++W S+IAG N FEAL +F +K
Sbjct: 464 -------------------------------VISWTSIIAGLRLNNRCFEAL-IFLRQMK 491
Query: 271 DSSLKPDKFTLASTLSACANLEKLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVE 330
+L+P+ TL + L+ACA + L GK+IHA+++RT + NA
Sbjct: 492 -MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA------------ 538
Query: 331 IAQKIVEQSGISYLNVIAFTTLLDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQN 390
LLD Y++ G + A F+S + +DV +W +L GY +
Sbjct: 539 ---------------------LLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSER 576
Query: 391 GLNKDAVELFRSMVREGPKPNNYTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVS 450
G VELF MV+ +P+ T ++L S + G + G +L
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHY 636
Query: 451 NALITMYSKAGNINAARRVFNLIHWRQETVSWTSMIVALAQH---GLGEEAIQ-LFE 503
++ + +AG + A + + + W +++ A H LGE + Q +FE
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFE 693
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/854 (30%), Positives = 423/854 (49%), Gaps = 135/854 (15%)
Query: 1 METPNPPSLISPLEFYAH--LLQSNLKSRNPFVGKLVHARIIKCGLHLSVFLKNSLMNF- 57
++ + S+I L+ +A+ +L+ ++ +P K +H I+K G L +F N L+N
Sbjct: 35 LDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAY 94
Query: 58 ------------------------------YAKTESIS-YAK-----------------K 69
YA + I Y++ K
Sbjct: 95 VKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLK 154
Query: 70 VFDEMPVKTLCSW-----------------NTILSAYAKQGRLDLACEVFNLMPNRDSVS 112
+F + +C W +++AY+ G +D A VF + +D V
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 113 WTTIIVTYNEIGRFKNAIRMFVEMVQDQVLPTQFTVTSVLASCTALGDLSAGKKVHSFVV 172
W I+ Y E G F++++++ M +P +T + L + LG K VH ++
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 173 KTGLSGCVNVTNSLLNMYAKVGDEMMAKAVFDGMRLKNVSSWNVVVSLHIHSGRLDLARA 232
KT V LL +Y ++GD A VF+
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN---------------------------- 306
Query: 233 QFDQMIERDVVTWNSMIAGYSQNGYDFEALGMFANMLKDSSLKPDKFTLASTLSACANLE 292
+M + DVV W+ MIA + QNG+ EA+ +F M +++ + P++FTL+S L+ CA +
Sbjct: 307 ---EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEFTLSSILNGCAIGK 362
Query: 293 KLKLGKQIHAYIIRTEFDATGPVGNALISCYAKVGGVEIAQKIVEQSGISYLNVIAFTTL 352
LG+Q+H +++ FD V NALI YAK ++
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD---------------------- 400
Query: 353 LDGYIKIGDIGPARRIFDSLRDRDVVAWTAMLVGYEQNGLNKDAVELFRSMVREGPKPNN 412
A ++F L ++ V+W ++VGYE G A +FR +R
Sbjct: 401 -----------TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE 449
Query: 413 YTLSAMLSVSSSLASLDHGKQIHASALRSGEASSLSVSNALITMYSKAGNINAARRVFNL 472
T S+ L +SLAS+D G Q+H A+++ A ++VSN+LI MY+K G+I A+ VFN
Sbjct: 450 VTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE 509
Query: 473 IHWRQETVSWTSMIVALAQHGLGEEAIQLFERMLELGIKPDHITYVGVLTACTHGGLVEQ 532
+ + SW ++I + HGLG +A+++ + M + KP+ +T++GVL+ C++ GL++Q
Sbjct: 510 ME-TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQ 568
Query: 533 GQRYYNMMKNVHKIKPTPSHFASMVDLLGRAGLLQEAYNFIENMPLEPDVVAWGSLLSAC 592
GQ + M H I+P H+ MV LLGR+G L +A IE +P EP V+ W ++LSA
Sbjct: 569 GQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSAS 628
Query: 593 RVHKNLDLGKIAAEKLLLIEPDNSGAYSALCNLYSSCGKWEDAANIRKSMKYVGVKKTQG 652
N + + +AE++L I P + Y + N+Y+ +W + A+IRKSMK +GVKK G
Sbjct: 629 MNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPG 688
Query: 653 FSWVQIQNKVHVFGVEDWLHPQRDAIYNKMAKIWDEIKEMGFVPDTASVLHDVEEDVKEQ 712
SW++ Q VH F V HP I + + + G+VPD +VL D++++ K++
Sbjct: 689 LSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDK 748
Query: 713 MLRHHSEKLAIAFGLISTPEN-TTLRIMKNLRVCNDCHSAIKFICKLVDREIVVRDATRF 771
L HSE+LA+A+GL+ P + + IMKNLR+C+DCHSA+K I +V R++V+RD RF
Sbjct: 749 RLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRF 808
Query: 772 HHFKKGLCSCRDYW 785
HHF G+CSC D+W
Sbjct: 809 HHFHAGVCSCGDHW 822
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 278,313,380
Number of Sequences: 539616
Number of extensions: 11242053
Number of successful extensions: 39758
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 28375
Number of HSP's gapped (non-prelim): 2987
length of query: 785
length of database: 191,569,459
effective HSP length: 126
effective length of query: 659
effective length of database: 123,577,843
effective search space: 81437798537
effective search space used: 81437798537
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)