Query 003938
Match_columns 785
No_of_seqs 508 out of 2120
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 08:53:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zhx_A KES1 protein; oxysterol 100.0 6.3E-81 2.2E-85 697.7 28.7 305 419-746 9-370 (438)
2 2rsg_A Collagen type IV alpha- 99.9 2.8E-22 9.4E-27 177.6 10.5 93 82-212 1-93 (94)
3 3rcp_A Pleckstrin homology dom 99.8 4.9E-21 1.7E-25 172.0 11.4 95 84-216 1-96 (103)
4 2d9x_A Oxysterol binding prote 99.8 4.2E-20 1.4E-24 171.2 11.1 100 80-217 6-108 (120)
5 1v88_A Oxysterol binding prote 99.8 1.6E-19 5.6E-24 171.1 12.4 95 81-216 7-127 (130)
6 2dhk_A TBC1 domain family memb 99.8 2.8E-19 9.5E-24 165.7 13.6 99 80-218 6-109 (119)
7 1x1f_A Signal-transducing adap 99.8 1.8E-19 6.3E-24 174.7 12.5 96 79-214 15-114 (149)
8 2cod_A Centaurin-delta 1; ARF 99.8 2E-18 6.9E-23 158.2 15.1 97 79-216 5-102 (115)
9 2da0_A 130-kDa phosphatidylino 99.8 2.8E-18 9.7E-23 157.6 14.8 97 80-217 8-105 (114)
10 1wi1_A Calcium-dependent activ 99.8 1.3E-18 4.4E-23 163.3 12.4 95 82-216 8-113 (126)
11 2d9v_A Pleckstrin homology dom 99.8 1.5E-18 5.2E-23 163.4 12.8 96 79-214 5-115 (130)
12 1wgq_A FYVE, rhogef and PH dom 99.8 2.9E-18 9.8E-23 155.6 14.2 94 80-213 6-103 (109)
13 1pls_A Pleckstrin homology dom 99.8 5E-18 1.7E-22 154.9 14.9 96 81-216 4-104 (113)
14 1v5u_A SBF1, SET binding facto 99.8 2.2E-18 7.6E-23 157.6 12.6 95 80-214 6-112 (117)
15 4a6h_A Phosphatidylinositol 4, 99.8 2.4E-18 8.1E-23 161.0 12.9 95 82-213 6-118 (120)
16 3aj4_A Pleckstrin homology dom 99.8 1.6E-18 5.5E-23 157.9 10.4 95 79-213 2-111 (112)
17 1eaz_A Tandem PH domain contai 99.8 5.4E-18 1.9E-22 156.7 13.5 98 79-216 11-114 (125)
18 2dkp_A Pleckstrin homology dom 99.8 7.1E-18 2.4E-22 156.8 14.3 96 79-214 18-120 (128)
19 2dn6_A KIAA0640 protein; PH do 99.8 7.9E-18 2.7E-22 153.4 14.1 98 79-216 5-106 (115)
20 1v89_A Hypothetical protein KI 99.8 5.2E-18 1.8E-22 154.9 12.9 96 81-216 7-115 (118)
21 1fgy_A GRP1; PH domain, signal 99.8 9.9E-18 3.4E-22 155.2 14.5 96 81-216 4-123 (127)
22 1fao_A Dual adaptor of phospho 99.7 1.1E-17 3.6E-22 155.6 13.9 97 81-217 17-116 (126)
23 1btk_A Bruton'S tyrosine kinas 99.7 6.2E-18 2.1E-22 167.1 12.3 100 81-216 2-135 (169)
24 2i5f_A Pleckstrin; PH domain, 99.7 1.5E-17 5.2E-22 150.1 13.8 92 81-212 6-108 (109)
25 2yry_A Pleckstrin homology dom 99.7 1.1E-17 3.8E-22 154.2 13.1 95 79-213 19-120 (122)
26 1upq_A PEPP1; PH domain, phosp 99.7 1.8E-17 6.2E-22 153.0 13.7 96 79-214 8-110 (123)
27 2rlo_A Centaurin-gamma 1; spli 99.7 1.2E-17 4.2E-22 156.5 12.1 110 82-214 4-125 (128)
28 2d9y_A Pleckstrin homology dom 99.7 2.8E-17 9.5E-22 150.2 13.5 96 79-214 8-110 (117)
29 1v5p_A Pleckstrin homology dom 99.7 9.4E-18 3.2E-22 158.1 10.2 98 83-216 16-123 (126)
30 1x05_A Pleckstrin; PH domain, 99.7 2.1E-17 7.3E-22 154.2 12.5 96 80-215 16-122 (129)
31 1u5d_A SKAP55, SRC kinase-asso 99.7 1.4E-17 4.8E-22 149.4 10.7 94 81-214 2-106 (108)
32 2coc_A FYVE, rhogef and PH dom 99.7 2.2E-17 7.6E-22 152.6 11.9 94 80-214 6-107 (112)
33 2w2x_D 1-phosphatidylinositol- 99.7 2.2E-17 7.4E-22 154.7 11.9 102 82-214 12-120 (124)
34 1unq_A RAC-alpha serine/threon 99.7 7.6E-18 2.6E-22 156.6 8.3 96 82-217 8-114 (125)
35 1btn_A Beta-spectrin; signal t 99.7 3.3E-17 1.1E-21 147.1 11.5 94 84-211 1-106 (106)
36 2lul_A Tyrosine-protein kinase 99.7 4.8E-17 1.6E-21 159.7 13.6 100 79-217 12-125 (164)
37 2cof_A Protein KIAA1914; PH do 99.7 1.9E-17 6.4E-22 150.3 9.9 93 80-213 6-101 (107)
38 2y7b_A Actin-binding protein a 99.7 2.5E-17 8.7E-22 154.4 10.8 99 80-215 3-130 (134)
39 1x1g_A Pleckstrin 2; PH domain 99.7 3.5E-17 1.2E-21 152.5 10.6 95 80-213 16-124 (129)
40 1wg7_A Dedicator of cytokinesi 99.7 5.6E-17 1.9E-21 155.5 11.8 96 80-214 16-125 (150)
41 3cxb_B Pleckstrin homology dom 99.7 9.3E-17 3.2E-21 147.7 12.3 92 83-214 1-102 (112)
42 1u5f_A SRC-associated adaptor 99.7 6.5E-17 2.2E-21 155.1 11.6 95 82-216 17-122 (148)
43 2p0d_A RHO GTPase-activating p 99.7 1.4E-16 4.7E-21 150.3 12.5 108 81-217 11-128 (129)
44 1wjm_A Beta-spectrin III; PH d 99.7 1.4E-16 4.7E-21 147.9 12.1 103 80-216 6-120 (123)
45 1dyn_A Dynamin; signal transdu 99.7 9.4E-17 3.2E-21 149.5 10.6 91 81-211 11-115 (125)
46 1u5e_A SRC-associated adaptor 99.7 3E-16 1E-20 160.3 12.6 95 80-214 104-209 (211)
47 2j59_M RHO-GTPase activating p 99.6 4.3E-16 1.5E-20 152.5 11.5 95 82-214 3-112 (168)
48 3tfm_A Myosin X; split PH doma 99.6 7E-16 2.4E-20 159.3 11.4 95 80-214 56-156 (228)
49 2r09_A Cytohesin-3; autoinhibi 99.6 3.5E-15 1.2E-19 163.3 13.2 94 82-215 213-330 (347)
50 3lju_X ARF-GAP with dual PH do 99.6 1.9E-15 6.5E-20 167.7 11.2 94 81-214 268-373 (386)
51 3a8p_A T-lymphoma invasion and 99.6 3.2E-15 1.1E-19 157.8 12.3 103 80-216 9-127 (263)
52 1qqg_A IRS-1, insulin receptor 99.6 5.8E-15 2E-19 155.8 10.8 96 81-215 9-114 (264)
53 1dro_A Beta-spectrin; cytoskel 99.6 4.7E-15 1.6E-19 137.8 8.9 104 79-214 5-120 (122)
54 2q13_A DCC-interacting protein 99.6 6.1E-15 2.1E-19 163.2 10.8 93 81-214 277-376 (385)
55 4h8s_A DCC-interacting protein 99.6 4E-15 1.4E-19 165.9 8.5 95 80-215 299-400 (407)
56 3lju_X ARF-GAP with dual PH do 99.5 1.7E-14 6E-19 159.9 11.9 93 82-214 146-247 (386)
57 3tca_A Amyloid beta A4 precurs 99.5 4.8E-14 1.7E-18 149.0 11.8 93 80-212 166-275 (291)
58 3pp2_A RHO GTPase-activating p 99.5 4E-13 1.4E-17 125.7 12.7 105 81-213 7-123 (124)
59 2rov_A RHO-associated protein 99.5 2.1E-13 7.3E-18 126.8 10.4 94 83-213 2-115 (117)
60 2dtc_A RAL guanine nucleotide 99.4 7.7E-13 2.6E-17 124.5 13.9 103 83-216 2-115 (126)
61 2ys3_A UNC-112-related protein 99.4 2.1E-13 7.2E-18 129.0 8.8 94 82-213 9-112 (137)
62 2fjl_A 1-phosphatidylinositol- 99.4 2.3E-12 7.7E-17 124.0 12.9 127 83-213 2-148 (150)
63 2d9w_A Docking protein 2; PH d 99.4 6E-12 2.1E-16 117.0 12.9 97 79-212 9-120 (127)
64 4f7h_A Fermitin family homolog 99.3 1.8E-11 6.3E-16 118.5 12.3 95 82-214 47-151 (173)
65 4ejn_A RAC-alpha serine/threon 99.3 4.1E-12 1.4E-16 142.0 9.1 95 80-214 4-109 (446)
66 4bbk_A Kindlin-1, fermitin fam 99.2 3.3E-11 1.1E-15 115.6 11.9 94 82-213 26-129 (165)
67 1w1g_A HPDK1, 3-phosphoinositi 99.2 3.2E-11 1.1E-15 116.0 10.0 94 78-215 48-141 (151)
68 3a8n_A TIAM-1, T-lymphoma inva 99.1 6.5E-11 2.2E-15 125.4 9.0 102 80-215 9-126 (279)
69 3hk0_A Growth factor receptor- 99.1 4E-10 1.4E-14 118.1 11.9 95 80-214 130-241 (256)
70 4gmv_A RAS-associated and plec 99.0 8.2E-10 2.8E-14 117.1 11.8 98 80-214 156-267 (281)
71 2coa_A Protein kinase C, D2 ty 98.4 7.3E-07 2.5E-11 82.9 9.4 94 79-212 5-118 (125)
72 2d9z_A Protein kinase C, NU ty 98.3 4.9E-06 1.7E-10 77.6 12.6 95 79-213 5-123 (129)
73 3tfm_A Myosin X; split PH doma 98.1 2.6E-06 9.1E-11 87.5 5.9 38 81-118 20-57 (228)
74 2lg1_A A-kinase anchor protein 97.8 0.00014 4.9E-09 72.4 11.7 101 82-216 71-175 (185)
75 3ml4_A Protein DOK-7; tyrosine 97.5 0.00039 1.3E-08 70.6 10.1 96 81-214 8-114 (224)
76 3mpx_A FYVE, rhogef and PH dom 97.5 0.00026 8.9E-09 78.8 9.7 95 81-215 243-339 (434)
77 3t06_A PDZ-rhogef, RHO guanine 97.4 0.001 3.4E-08 73.8 13.3 111 82-215 295-410 (418)
78 1xcg_A PDZ-rhogef, RHO guanine 97.3 0.0021 7.2E-08 69.9 14.0 110 82-214 253-367 (368)
79 1zc3_B Exocyst complex protein 97.3 0.0034 1.2E-07 57.6 13.1 97 82-214 8-108 (113)
80 1v61_A RAC/CDC42 guanine nucle 97.3 0.00099 3.4E-08 63.0 9.4 98 82-217 29-130 (132)
81 3qwm_A Iqsec1, IQ motif and SE 97.2 0.0021 7.3E-08 61.1 11.5 88 95-216 30-125 (140)
82 3p6a_A RHO guanine nucleotide 97.2 0.0029 9.8E-08 69.0 14.0 112 81-215 258-373 (377)
83 2dfk_A Collybistin II; DH doma 97.2 0.002 7E-08 71.2 12.8 100 81-216 256-366 (402)
84 2pz1_A RHO guanine nucleotide 97.2 0.0019 6.6E-08 72.6 12.7 99 82-216 334-443 (466)
85 2vrw_B P95VAV, VAV1, proto-onc 97.2 0.0022 7.5E-08 70.9 12.5 96 82-216 234-338 (406)
86 1mai_A Phospholipase C delta-1 97.1 0.0025 8.5E-08 59.8 10.8 39 178-216 84-124 (131)
87 3ky9_A Proto-oncogene VAV; cal 97.1 0.002 6.9E-08 74.8 12.1 96 82-216 406-510 (587)
88 1kz7_A Guanine nucleotide exch 97.1 0.0048 1.6E-07 67.0 13.9 104 82-215 210-327 (353)
89 1dbh_A Protein (human SOS 1); 97.1 0.0023 7.8E-08 69.3 11.2 101 81-214 246-350 (354)
90 3odw_A RHO guanine nucleotide 97.0 0.0042 1.4E-07 71.5 13.6 113 81-216 411-527 (536)
91 1txd_A RHO guanine nucleotide 97.0 0.0045 1.5E-07 67.8 13.0 113 82-217 257-373 (385)
92 1v5m_A SH2 and PH domain-conta 97.0 0.0021 7.3E-08 60.2 8.5 96 79-214 15-131 (136)
93 1nty_A Triple functional domai 96.8 0.0082 2.8E-07 63.8 12.2 99 82-214 203-309 (311)
94 2rr3_B OSBP, oxysterol-binding 96.3 0.0023 7.7E-08 48.1 2.8 22 340-361 10-31 (47)
95 2rgn_B RHOA/RAC/CDC42 exchange 96.3 0.031 1E-06 60.7 13.1 102 82-214 207-319 (354)
96 2z0q_A XPLN, RHO guanine nucle 96.1 0.023 7.8E-07 61.2 10.8 92 82-212 232-345 (346)
97 3jzy_A Intersectin 2; C2 domai 96.0 0.0012 4.1E-08 74.8 0.0 106 82-215 253-364 (510)
98 1foe_A T-lymphoma invasion and 94.7 0.3 1E-05 53.0 13.8 57 160-216 301-369 (377)
99 3v5w_A G-protein coupled recep 94.3 0.33 1.1E-05 57.4 13.9 99 79-219 556-658 (689)
100 3ksy_A SOS-1, SON of sevenless 94.1 0.11 3.9E-06 64.3 9.9 100 81-213 443-546 (1049)
101 1fho_A UNC-89; pleckstrin homo 85.9 1.1 3.9E-05 41.2 6.0 98 82-215 10-114 (119)
102 1z87_A Alpha-1-syntrophin; pro 82.4 3.6 0.00012 42.9 8.7 51 162-212 205-261 (263)
103 3zvr_A Dynamin-1; hydrolase, D 82.1 5.9 0.0002 47.4 11.4 90 82-211 540-643 (772)
104 3qr0_A Phospholipase C-beta (P 80.9 5.3 0.00018 48.1 10.6 36 178-213 102-142 (816)
105 2adz_A Alpha-1-syntrophin; pro 79.1 4.4 0.00015 39.9 7.4 51 162-212 120-176 (178)
106 3ohm_B 1-phosphatidylinositol- 68.3 18 0.00063 43.8 10.8 38 177-214 98-140 (885)
107 2zkm_X 1-phosphatidylinositol- 59.9 34 0.0012 41.0 10.9 37 178-214 95-136 (799)
108 1gk7_A Vimentin; intermediate 46.3 32 0.0011 25.4 4.8 32 266-297 5-36 (39)
109 2xu6_A MDV1 coiled coil; prote 39.8 67 0.0023 26.9 6.2 42 256-297 17-58 (72)
110 3ulb_A Target of rapamycin com 39.1 2.2E+02 0.0074 26.2 10.1 53 163-215 57-116 (121)
111 3hie_A Protein PSL1, exocyst c 32.0 3.3E+02 0.011 26.4 10.8 37 178-215 114-150 (171)
112 1dip_A Delta-sleep-inducing pe 26.0 1.5E+02 0.0053 24.8 6.1 28 271-298 19-46 (78)
113 3iv1_A Tumor susceptibility ge 24.2 2.1E+02 0.0072 24.3 6.8 56 232-297 7-62 (78)
114 3sbu_A Hypothetical NTF2-like 22.3 58 0.002 33.5 3.6 40 566-605 206-248 (261)
115 2wt7_A Proto-oncogene protein 22.3 2.4E+02 0.008 22.6 6.7 48 250-297 13-60 (63)
116 3uux_B Mitochondrial division 21.5 2E+02 0.0067 29.4 7.3 42 256-297 173-214 (242)
117 1t2k_D Cyclic-AMP-dependent tr 20.3 2.9E+02 0.0098 21.8 6.8 48 250-297 12-59 (61)
No 1
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A
Probab=100.00 E-value=6.3e-81 Score=697.67 Aligned_cols=305 Identities=22% Similarity=0.376 Sum_probs=268.1
Q ss_pred CCchhHHHhhcccC---CCCCccccccccccccChHHhhhhcccchHHHHHHHhcC-------CCCC------HHHHHHH
Q 003938 419 KPVGLWSIIKDNIG---KDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDQASAWG-------KQGN------DLMRILN 482 (785)
Q Consensus 419 ~~~slwsilK~~iG---kDLskIslPv~~~EP~S~LQr~~e~~ey~~lLd~Aa~~~-------~~~d------~~eR~~~ 482 (785)
.+.++|+++.++|| +|||+|+|||+||||+|+||+++++|+|++||+.|+... +..| |++||++
T Consensus 9 ~~~s~w~~~lK~i~k~g~DLSkIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~~ 88 (438)
T 1zhx_A 9 ASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLA 88 (438)
T ss_dssp TTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHH
T ss_pred ccccHHHHHHHHhhhcCCChhhcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHHHH
Confidence 56899986666665 599999999999999999999999999999999998641 1238 9999999
Q ss_pred HHHHHhhhccccc-------CCcCCCCCCCCCCeEEEEcCC-----CC-eEEEEeecccCCCeeEEE-------E-----
Q 003938 483 VAAFAVSGYASTE-------GRQCKPFNPLLGETYEADYPD-----KG-LRFFSEKVSHHPMIVACH-------W----- 537 (785)
Q Consensus 483 V~aF~vS~y~~~~-------~r~~KPfNPlLGETfe~~~~d-----~g-~r~iaEQVSHHPPIsA~~-------w----- 537 (785)
|++|+||+|++.. ++++|||||||||||+|.|+| .| ++|||||||||||||||| |
T Consensus 89 V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g~ 168 (438)
T 1zhx_A 89 VTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGY 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEEE
Confidence 9999999997532 688999999999999999986 46 899999999999999999 2
Q ss_pred -----EEEee-EEEEEeceEEEEEecCCceEEEeeeeeeeeeeeeceeeEeecceEEEEcCCCceEEEEEeecCccCCCC
Q 003938 538 -----KFWGR-SIQLDPVGVLTLQFDDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIRGSGNYSCKLKFKEQSIIDRNP 611 (785)
Q Consensus 538 -----kF~G~-Si~i~~~G~~~l~f~~ge~Y~~~~p~~~i~nii~G~~~~e~~G~~~I~~~tg~~~~l~F~~~~~~~~~~ 611 (785)
||||+ ||+|.+.|.++|+|. ||+|+|++|+++|+|||+|++|+|++|+|.|+|+||++|+|+|+++||||++.
T Consensus 169 ~~~kskF~G~~Sv~v~~~G~~~l~l~-~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~~tg~~~~l~F~~kg~f~g~~ 247 (438)
T 1zhx_A 169 NQIKASFTKSLMLTVKQFGHTMLDIK-DESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKK 247 (438)
T ss_dssp EEEEEEECTTCCEEEEEECCEEEEET-TEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSSS
T ss_pred eeeEEEEcCceEEEEEcceEEEEEEC-CcEEEEecCcEEEEEEEecceeEecCCeEEEEcCCCCEEEEEEcCCCCcCCCc
Confidence 89999 999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCC-----CCcEEEEEEEEEcceEEEEeCCCCCCCCCCCCCCCcEEEEecCCCCcccccCcccccccccCCC
Q 003938 612 HQVHGFVQDNR-----TGEKVAMLVGKWDEAMYYVLGDPTTKPKGYDPMTEAVLLWERGKTVTKTRYNLTPFAISLNELT 686 (785)
Q Consensus 612 ~~V~G~V~~~~-----~g~~~~~i~G~Wd~~l~~~~~~~~~k~~~~~~~~~~~~lW~~~~~~~~~~y~ft~fa~~LNe~~ 686 (785)
|.|+|.|++.. +|+++++|.|+|++.|++.+.... ....++|++++.+. +++ .+.
T Consensus 248 n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~---------~~~~~~~~~~~~~~------~~~-----~v~ 307 (438)
T 1zhx_A 248 NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK---------EESRLFYDAARIPA------EHL-----NVK 307 (438)
T ss_dssp SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG---------GGCEEEEETTTSCC------CCC-----BCC
T ss_pred cEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC---------ccceEEeccCCCCC------ccc-----cCC
Confidence 99999999831 678999999999999999765431 12578999987654 111 123
Q ss_pred ccccCCCCCCCCcc--hhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhc---CCCCCceeEeCC
Q 003938 687 PGLLDKLPPTDSRL--RPDQRYLENGEYELANAEKLRLEQLQRQARQLQE---SGWQPSWFCKDE 746 (785)
Q Consensus 687 ~~~~~~l~pTDSR~--RpD~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~re---~~w~P~~F~~~~ 746 (785)
| .+.++|||||+ |||+|||++||++.|++||.+|||+||++||+|+ ..|+|+||++.+
T Consensus 308 p--~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK~rLEe~QR~~rk~re~~g~~w~Pr~F~~~~ 370 (438)
T 1zhx_A 308 P--LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFD 370 (438)
T ss_dssp C--GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEE
T ss_pred C--hhhCCCcccchhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccceEEECC
Confidence 2 35679999997 8999999999999999999999999999998765 579999999873
No 2
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.87 E-value=2.8e-22 Score=177.64 Aligned_cols=93 Identities=33% Similarity=0.623 Sum_probs=83.6
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
+.++|||+|+|+.+|+||+|||||+++.|+||+++.+ ....|
T Consensus 1 V~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~--------------------------------------~~~~~ 42 (94)
T 2rsg_A 1 VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDE--------------------------------------TEYGC 42 (94)
T ss_dssp CCEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTG--------------------------------------GGTCC
T ss_pred CCEEEEEEEeCCCCCCceEEEEEEECCEEEEEEeccc--------------------------------------ccccc
Confidence 3689999999999999999999999999999997542 12247
Q ss_pred ceeEEccceEEEecCCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003938 162 FGEIHLKVSSVRASKSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAK 212 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~ 212 (785)
.|.|.|..+.+.....+...|.|.+++|+|+|+|+|++|+++||+||+.|+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 43 RGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp SEEEETTTCEEEECSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred eeeEecceeeeecCcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhhc
Confidence 899999999998888888999999999999999999999999999999985
No 3
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.84 E-value=4.9e-21 Score=172.00 Aligned_cols=95 Identities=31% Similarity=0.733 Sum_probs=83.4
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCcce
Q 003938 84 VAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKPFG 163 (785)
Q Consensus 84 ~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p~G 163 (785)
|+|||+|+|+..|+||+|||||+++.|+||+++.+ ....|.|
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~--------------------------------------~~~~~~g 42 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDD--------------------------------------VCKGSKG 42 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----------------------------------------CCCSC
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCc--------------------------------------ccCCccc
Confidence 68999999999999999999999999999998542 1123789
Q ss_pred eEEccceEEEecCCCCCceEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 164 EIHLKVSSVRASKSDDKRLTIFTG-TKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 164 ~I~L~~~si~~s~~d~~~F~I~t~-~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.|+|..+.+.....++..|.|.++ .|+|+|+|+|.+|++.||.||+.|+....
T Consensus 43 ~i~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~~~ 96 (103)
T 3rcp_A 43 SIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKASLT 96 (103)
T ss_dssp EEEGGGCEEECCTTCSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCCCC
T ss_pred EEEeeeeEEEEcCCCCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999877778889999886 89999999999999999999999987644
No 4
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=4.2e-20 Score=171.18 Aligned_cols=100 Identities=28% Similarity=0.547 Sum_probs=86.1
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLE--DGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~--~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
..+.++|||+|+++..++||+|||||+ ++.|+||+++.+ .
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~--------------------------------------~ 47 (120)
T 2d9x_A 6 SGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQS--------------------------------------R 47 (120)
T ss_dssp SCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGG--------------------------------------S
T ss_pred CCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcc--------------------------------------c
Confidence 446899999999999999999999998 689999997532 1
Q ss_pred CCCcceeEEccceEEEecCCCCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 158 QCKPFGEIHLKVSSVRASKSDDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
..+|+|.|+|..+.|.....+...|.|.++. |+|+|+|+|.+|+++||.||+.|+.....
T Consensus 48 ~~~~~g~I~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 48 NQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp SSCCSEEEECTTCCEECCSSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccceEEcceEEEEecCCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 1248899999999987666677899999986 99999999999999999999999887654
No 5
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=1.6e-19 Score=171.06 Aligned_cols=95 Identities=27% Similarity=0.376 Sum_probs=79.6
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.+.++|||+|+| .+|+||+|||||++++|+|||++.+ .+
T Consensus 7 ~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~~----------------------------------------~~ 45 (130)
T 1v88_A 7 GIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQKN----------------------------------------GQ 45 (130)
T ss_dssp SCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSSS----------------------------------------CC
T ss_pred ceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCCC----------------------------------------CC
Confidence 468999999998 8899999999999999999997542 23
Q ss_pred cceeEEccceEEEecCCCC--CceEEEeC------------------------CeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 161 PFGEIHLKVSSVRASKSDD--KRLTIFTG------------------------TKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~d~--~~F~I~t~------------------------~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
|.|.|.|..++|....... ..|.|.++ +|+|+|+|+|++||++||+||+.|+..
T Consensus 46 p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 46 WVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp CCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEcCCCEEEECCCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 8899999999987554333 57888765 346999999999999999999999876
Q ss_pred cc
Q 003938 215 FP 216 (785)
Q Consensus 215 ~~ 216 (785)
.|
T Consensus 126 ~~ 127 (130)
T 1v88_A 126 GP 127 (130)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 6
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=2.8e-19 Score=165.73 Aligned_cols=99 Identities=21% Similarity=0.451 Sum_probs=84.3
Q ss_pred CCcceEEEEEeecC--CCCCceeeEEEEeCC--eEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccc
Q 003938 80 VSASVAGILYKWVN--YGKGWRSRWFVLEDG--VLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFA 155 (785)
Q Consensus 80 ~~~~~~G~L~K~g~--~~K~Wk~RWFVL~~g--~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~ 155 (785)
.+..++|||+|+++ ..|+||+|||||+++ .|+||+++.+
T Consensus 6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~------------------------------------- 48 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD------------------------------------- 48 (119)
T ss_dssp SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTC-------------------------------------
T ss_pred CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCC-------------------------------------
Confidence 34589999999996 779999999999998 9999997542
Q ss_pred ccCCCcceeEEccceEEEec-CCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcccc
Q 003938 156 ARQCKPFGEIHLKVSSVRAS-KSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFPRL 218 (785)
Q Consensus 156 ~~~~~p~G~I~L~~~si~~s-~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~~~ 218 (785)
.+|+|.|+|..+.+... ......|.|.++.|+|+|+|+|.+|+++||.||+.|+..+...
T Consensus 49 ---~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 49 ---ANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp ---CSCSEEEEGGGCEEEECTTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---cccccEEECCCCEEEecCCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 13889999999887753 2345679999999999999999999999999999999887543
No 7
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=1.8e-19 Score=174.67 Aligned_cols=96 Identities=11% Similarity=0.191 Sum_probs=81.7
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 79 GVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+.++.++|||+|+|+.+|+||+|||||+++.|+|||++.+
T Consensus 15 ~~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d---------------------------------------- 54 (149)
T 1x1f_A 15 ALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKS---------------------------------------- 54 (149)
T ss_dssp SSCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSC----------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCc----------------------------------------
Confidence 4568999999999999999999999999999999997543
Q ss_pred CCcceeEEccceEEEecC----CCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVRASK----SDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s~----~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..+.|.|+|..+++.... .....|.|.++.|+|+|+|+|.+||++||.||+.+...
T Consensus 55 ~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 55 IIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp SSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred cccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 126789999888766321 12457999999999999999999999999999999874
No 8
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=2e-18 Score=158.16 Aligned_cols=97 Identities=23% Similarity=0.309 Sum_probs=82.3
Q ss_pred CCCcceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWVN-YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~-~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+..+.++|||+|+++ ..++||+|||||+++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~--------------------------------------- 45 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE--------------------------------------- 45 (115)
T ss_dssp CSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCC---------------------------------------
T ss_pred CCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCC---------------------------------------
Confidence 345689999999998 7899999999999999999997543
Q ss_pred CCCcceeEEccceEEEecCCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 158 QCKPFGEIHLKVSSVRASKSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.++.|.|.|..+..+.. .++..|.|.++.|+|+|+|+|.+|+++||.||+.+....+
T Consensus 46 -~~~~g~i~l~~~~~v~~-~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 46 -MYSKGIIPLSAISTVRV-QGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp -SSCCCEEETTTEEEEEE-ETTTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred -cccCCEEECCcceEEEe-CCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 13789999998764433 3378899999999999999999999999999999986544
No 9
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.8e-18 Score=157.59 Aligned_cols=97 Identities=20% Similarity=0.347 Sum_probs=82.1
Q ss_pred CCcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 80 VSASVAGILYKWVNYG-KGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~-K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
.++.++|||+|+++.. ++||+|||||+++.|+||+++..
T Consensus 8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~---------------------------------------- 47 (114)
T 2da0_A 8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSN---------------------------------------- 47 (114)
T ss_dssp CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCC----------------------------------------
T ss_pred CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCC----------------------------------------
Confidence 4568999999999866 99999999999999999997432
Q ss_pred CCcceeEEccceEEEecCCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 159 CKPFGEIHLKVSSVRASKSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
.+.+.|.|..+.+.........|.|.++.|+|+|+|+|.+|++.||.||+.|+....+
T Consensus 48 -~~~~~i~l~~~~v~~~~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 48 -RQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp -SCCEEEETTTSEEEECSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCEEEeeeeEEEECCCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1457777777777655556678999999999999999999999999999999877543
No 10
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=1.3e-18 Score=163.32 Aligned_cols=95 Identities=18% Similarity=0.269 Sum_probs=78.8
Q ss_pred cceEEEEEeecC-CCCCceeeEEEEeCCeEEEEe----ecCCCccccCcccCCCceeeccchhhhhhccccccccccccc
Q 003938 82 ASVAGILYKWVN-YGKGWRSRWFVLEDGVLSYYK----IHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAA 156 (785)
Q Consensus 82 ~~~~G~L~K~g~-~~K~Wk~RWFVL~~g~L~YYk----~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~ 156 (785)
..++|||+|+|. ..|+||+|||||.+..|+||+ .+.
T Consensus 8 ~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~--------------------------------------- 48 (126)
T 1wi1_A 8 MKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREK--------------------------------------- 48 (126)
T ss_dssp EEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSS---------------------------------------
T ss_pred CceeEEEEEeCCCcccccceEEEEEeCCEEEEEEccccccc---------------------------------------
Confidence 478999999987 559999999999999999999 432
Q ss_pred cCCCcceeEEccceEEEecC--C----CCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 157 RQCKPFGEIHLKVSSVRASK--S----DDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 157 ~~~~p~G~I~L~~~si~~s~--~----d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
...|.|.|.|..+.|.... . ....|.|++++++|+|.|+|++||+.||+||+.|.....
T Consensus 49 -~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~~~~ 113 (126)
T 1wi1_A 49 -KAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQSH 113 (126)
T ss_dssp -SSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTCSS
T ss_pred -CCCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhcccc
Confidence 2248999999999987431 1 224577888899999999999999999999999986543
No 11
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.5e-18 Score=163.43 Aligned_cols=96 Identities=25% Similarity=0.460 Sum_probs=74.9
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWVNYGKGWRSRWFVL-EDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~K~Wk~RWFVL-~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+..+.++|||+|+|+..|+||+||||| +++.|+||+++.+.
T Consensus 5 ~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~-------------------------------------- 46 (130)
T 2d9v_A 5 SSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQ-------------------------------------- 46 (130)
T ss_dssp CCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTT--------------------------------------
T ss_pred CCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCC--------------------------------------
Confidence 345689999999999999999999999 89999999975431
Q ss_pred CCCcceeEEccceE--EEe-----------cCCCCCceEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSS--VRA-----------SKSDDKRLTIFT-GTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 158 ~~~p~G~I~L~~~s--i~~-----------s~~d~~~F~I~t-~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+.|.|.|.... +.. .......|.|.+ ..|+|+|+|+|++||++||+||+.|+..
T Consensus 47 --~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 47 --DEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp --SEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred --CcCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 245666655321 110 122346799998 4599999999999999999999999864
No 12
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.77 E-value=2.9e-18 Score=155.65 Aligned_cols=94 Identities=21% Similarity=0.367 Sum_probs=79.7
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
..+.++|||+|+++..++||+|||||+++.|+||+++.+ .
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~----------------------------------------~ 45 (109)
T 1wgq_A 6 SGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASED----------------------------------------V 45 (109)
T ss_dssp CSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTC----------------------------------------S
T ss_pred CCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCc----------------------------------------C
Confidence 345899999999998999999999999999999997542 2
Q ss_pred CcceeEEccceEEEecCCC---CCceEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSSVRASKSD---DKRLTIFTG-TKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s~~d---~~~F~I~t~-~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
+|.|.|.|..+.+...... ...|.|.++ .|+|+|+|+|.+|++.||.||+.|..
T Consensus 46 ~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 46 AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp SCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred ccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 3789999999988755332 357899876 57899999999999999999999964
No 13
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=5e-18 Score=154.86 Aligned_cols=96 Identities=22% Similarity=0.319 Sum_probs=81.4
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.+.++|||+|+|+..++||+|||||+++.|+||+++.+ .+
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~~ 43 (113)
T 1pls_A 4 KRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSD----------------------------------------NS 43 (113)
T ss_dssp CCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTC----------------------------------------SS
T ss_pred CCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCC----------------------------------------CC
Confidence 35799999999999999999999999999999997532 23
Q ss_pred cceeEEccceEEEec----CCCCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 161 PFGEIHLKVSSVRAS----KSDDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 161 p~G~I~L~~~si~~s----~~d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
|.|.|.|..+.+... ......|.|.++. |+|+|+|+|.+|+++||.||+.|+....
T Consensus 44 ~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 44 PKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp CSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred cceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 889999999988641 1233579998875 9999999999999999999999988754
No 14
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.77 E-value=2.2e-18 Score=157.56 Aligned_cols=95 Identities=25% Similarity=0.415 Sum_probs=80.4
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLE--DGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~--~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
..+.++|||+|+++..++||+|||||+ ++.|+||++..+
T Consensus 6 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~--------------------------------------- 46 (117)
T 1v5u_A 6 SGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMD--------------------------------------- 46 (117)
T ss_dssp CSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSC---------------------------------------
T ss_pred CCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCC---------------------------------------
Confidence 446899999999999999999999999 899999997542
Q ss_pred CCCcceeEEccceEEEecC----------CCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVRASK----------SDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~----------~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+|.|.|+|..+.+.... .....|.|.++.|+|+|+|+|.+|+++||.||+.|+..
T Consensus 47 -~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 47 -TECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp -SSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred -CccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 238899999988865421 12357999999999999999999999999999998654
No 15
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.76 E-value=2.4e-18 Score=161.02 Aligned_cols=95 Identities=17% Similarity=0.312 Sum_probs=79.8
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
+.++|||+|+++..|+|++|||||.++.|+|||++... .+..|
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~-------------------------------------~d~~P 48 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRK-------------------------------------KDLVP 48 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTT-------------------------------------TCCSC
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcC-------------------------------------cCCCc
Confidence 78999999999999999999999999999999975421 22348
Q ss_pred ceeEEccceEEEecCC-----------CCCceEEEeCC-------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 162 FGEIHLKVSSVRASKS-----------DDKRLTIFTGT-------KTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~-----------d~~~F~I~t~~-------Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
.|.|.|..|.|..... ....|.|.+.. ++|+|+|+|.+||++||+||+.+..
T Consensus 49 ~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 49 VMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp SEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred eEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 9999999999987432 34578887654 6999999999999999999999854
No 16
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.76 E-value=1.6e-18 Score=157.86 Aligned_cols=95 Identities=25% Similarity=0.414 Sum_probs=75.0
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWVNYGKGWRSRWFVL-EDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~K~Wk~RWFVL-~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
++++.++|||+|+|+..|+||+||||| .++.|+||+++.+
T Consensus 2 ~~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~--------------------------------------- 42 (112)
T 3aj4_A 2 SMAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTR--------------------------------------- 42 (112)
T ss_dssp CCSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTC---------------------------------------
T ss_pred CcceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCC---------------------------------------
Confidence 456789999999999999999999999 8999999997543
Q ss_pred CCCcceeEEccceEEE-----------ecCCC--CCceEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVR-----------ASKSD--DKRLTIFTG-TKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~-----------~s~~d--~~~F~I~t~-~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
.++.|.|+|...+|. ..... +..|.|.++ .|+|+|+|+|.+|+++||.||+.|+.
T Consensus 43 -~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 43 -QNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp -CSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred -CCCCccccccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 125677777654422 11111 347999865 89999999999999999999999963
No 17
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=5.4e-18 Score=156.74 Aligned_cols=98 Identities=24% Similarity=0.327 Sum_probs=82.7
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 79 GVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
...+.++|||+|+|+..++||+|||||.++.|+||++..+
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 50 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELE---------------------------------------- 50 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTC----------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCC----------------------------------------
Confidence 3456899999999999999999999999999999997542
Q ss_pred CCcceeEEccceEEEec------CCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 159 CKPFGEIHLKVSSVRAS------KSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s------~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.+|.|.|.|..+..... ......|.|.++.|+|+|+|+|.+|+++||.||+.|+....
T Consensus 51 ~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 51 KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred CcceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 23789999998764432 13467899999999999999999999999999999988754
No 18
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.75 E-value=7.1e-18 Score=156.81 Aligned_cols=96 Identities=23% Similarity=0.320 Sum_probs=80.7
Q ss_pred CCCcceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWVN-YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~-~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+..+.++|||+|++. ..++||+|||||+++.|+||+++.+
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------------------------------------- 58 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKE--------------------------------------- 58 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC---------------------------------------
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCC---------------------------------------
Confidence 556789999999998 7899999999999999999997532
Q ss_pred CCCcceeEEccceEEEecC-----CCCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVRASK-----SDDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~-----~d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..|.|.|.|..+.+.... .....|.|.++. |+|+|+|+|.+|++.||.||+.|...
T Consensus 59 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 59 -EGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp -CSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred -cccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 237899999988876542 223468898875 99999999999999999999999753
No 19
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=7.9e-18 Score=153.42 Aligned_cols=98 Identities=22% Similarity=0.402 Sum_probs=81.7
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 79 GVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+..+.++|||+|+++..++||+|||||.++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 44 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDL---------------------------------------- 44 (115)
T ss_dssp CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTC----------------------------------------
T ss_pred CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCC----------------------------------------
Confidence 3456899999999999999999999999999999997432
Q ss_pred CCcceeEEccce-EEEecC---CCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 159 CKPFGEIHLKVS-SVRASK---SDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 159 ~~p~G~I~L~~~-si~~s~---~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.+|.|.|.|..+ .|.... .....|.|.++.|+|+|+|+|.+|+++||.||+.|+....
T Consensus 45 ~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 106 (115)
T 2dn6_A 45 KDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLK 106 (115)
T ss_dssp SSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHh
Confidence 237899999864 444332 2345799999999999999999999999999999988754
No 20
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=5.2e-18 Score=154.87 Aligned_cols=96 Identities=25% Similarity=0.366 Sum_probs=81.2
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.+.++|||+|+++..++||+|||||.++.|+||+++.+ ..
T Consensus 7 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~~ 46 (118)
T 1v89_A 7 GPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEED----------------------------------------TK 46 (118)
T ss_dssp CEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSC----------------------------------------CS
T ss_pred CCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCC----------------------------------------CC
Confidence 46899999999999999999999999999999997532 23
Q ss_pred cceeEEccceEEEecC---C--CCCceEEEe--------CCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 161 PFGEIHLKVSSVRASK---S--DDKRLTIFT--------GTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 161 p~G~I~L~~~si~~s~---~--d~~~F~I~t--------~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
|.|.|.|..+.+.... . ....|.|.+ +.|+|+|+|+|.+|++.||.||+.|+...+
T Consensus 47 ~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~ 115 (118)
T 1v89_A 47 PQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGP 115 (118)
T ss_dssp CSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred ceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccCC
Confidence 8899999999876432 1 234688887 789999999999999999999999987543
No 21
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.75 E-value=9.9e-18 Score=155.20 Aligned_cols=96 Identities=24% Similarity=0.456 Sum_probs=80.8
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.+.++|||+|+|+..++||+|||||+++.|+||+++.+ .+
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~~ 43 (127)
T 1fgy_A 4 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------KE 43 (127)
T ss_dssp SCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------SS
T ss_pred CCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCC----------------------------------------CC
Confidence 35899999999999999999999999999999997432 23
Q ss_pred cceeEEccceEEEecCC--CCCceEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 161 PFGEIHLKVSSVRASKS--DDKRLTIFTG----------------------TKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~--d~~~F~I~t~----------------------~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
|.|.|.|..+.+..... ....|.|.++ .|+|+|+|+|.+|++.||.||+.|+...+
T Consensus 44 ~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 123 (127)
T 1fgy_A 44 PRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDP 123 (127)
T ss_dssp CSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHCT
T ss_pred cceEEECCceEEEEccCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccCC
Confidence 88999999998775533 3456778765 38999999999999999999999988754
No 22
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.75 E-value=1.1e-17 Score=155.58 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=81.7
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.+.++|||+|+++..++|++|||||.++.|+||++..+ .+
T Consensus 17 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~~ 56 (126)
T 1fao_A 17 LGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMS----------------------------------------PE 56 (126)
T ss_dssp TTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------SS
T ss_pred CccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCC----------------------------------------CC
Confidence 45899999999998999999999999999999997432 23
Q ss_pred cceeEEccceEEEec-C--CCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 161 PFGEIHLKVSSVRAS-K--SDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 161 p~G~I~L~~~si~~s-~--~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
|.|.|+|..+.+... . .....|.|.++.|+|+|+|+|.+|++.||.||+.++....+
T Consensus 57 ~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 116 (126)
T 1fao_A 57 PIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRK 116 (126)
T ss_dssp CSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred ceeEEEccceEEEEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence 889999999884433 2 23457999999999999999999999999999999887543
No 23
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.74 E-value=6.2e-18 Score=167.07 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=78.7
Q ss_pred CcceEEEEEeecC-----CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccc
Q 003938 81 SASVAGILYKWVN-----YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFA 155 (785)
Q Consensus 81 ~~~~~G~L~K~g~-----~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~ 155 (785)
.++++|||+|++. ..|+||+|||||+++.|+||+++.+.
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~------------------------------------ 45 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFER------------------------------------ 45 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTT------------------------------------
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCcc------------------------------------
Confidence 4689999999873 24889999999999999999984310
Q ss_pred ccCCCcceeEEccceEEEecC---CCC--------------------------CceEEEeCCeEEEEEcCCHHHHHHHHH
Q 003938 156 ARQCKPFGEIHLKVSSVRASK---SDD--------------------------KRLTIFTGTKTLHLRCISREDRTVWID 206 (785)
Q Consensus 156 ~~~~~p~G~I~L~~~si~~s~---~d~--------------------------~~F~I~t~~Rt~~L~A~S~edr~~WI~ 206 (785)
....+++|.|.|..+.+++.. .+. ..|.|+++.|+|+|+|+|.+||++||+
T Consensus 46 ~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~ 125 (169)
T 1btk_A 46 GRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIH 125 (169)
T ss_dssp TEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHH
T ss_pred CCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHH
Confidence 012248899999987654322 111 468899999999999999999999999
Q ss_pred HHHHHHHHcc
Q 003938 207 ALQAAKDLFP 216 (785)
Q Consensus 207 AL~~a~~~~~ 216 (785)
||+.+....+
T Consensus 126 aI~~~i~~n~ 135 (169)
T 1btk_A 126 QLKNVIRYNS 135 (169)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHHHCc
Confidence 9999987644
No 24
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.74 E-value=1.5e-17 Score=150.06 Aligned_cols=92 Identities=32% Similarity=0.537 Sum_probs=77.8
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCC--eEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDG--VLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g--~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
.+.++|||+|+|+..++|++|||||.++ .|+||++..+
T Consensus 6 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~---------------------------------------- 45 (109)
T 2i5f_A 6 VIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGA---------------------------------------- 45 (109)
T ss_dssp CEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSC----------------------------------------
T ss_pred ceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCC----------------------------------------
Confidence 4689999999999999999999999986 9999996432
Q ss_pred CCcceeEEccceEEEecCC--------CCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVRASKS--------DDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAK 212 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s~~--------d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~ 212 (785)
..|.|.|+|..+.+..... ....|.|.++. |+|+|+|+|.+|+++||.||+.|.
T Consensus 46 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 46 EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp SSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 2388999999988754322 35679999875 789999999999999999999985
No 25
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=154.20 Aligned_cols=95 Identities=32% Similarity=0.469 Sum_probs=78.2
Q ss_pred CCCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWV-NYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g-~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+..+.++|||+|++ +..++|++|||||.++.|+||+++.+
T Consensus 19 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------------------------------------- 59 (122)
T 2yry_A 19 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE--------------------------------------- 59 (122)
T ss_dssp TCCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC---------------------------------------
T ss_pred CCCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCC---------------------------------------
Confidence 45678999999998 47899999999999999999997542
Q ss_pred CCCcceeEEccceEEEecC-----CCCCceEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVRASK-----SDDKRLTIFT-GTKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~-----~d~~~F~I~t-~~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
..|.|.|.|..+.|.... .....|.|.+ +.|+|+|+|+|.+|+++||.||+.|..
T Consensus 60 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 60 -ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp -CSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred -CCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 237899999988765332 1234788865 579999999999999999999999975
No 26
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.73 E-value=1.8e-17 Score=152.97 Aligned_cols=96 Identities=26% Similarity=0.343 Sum_probs=79.6
Q ss_pred CCCcceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWVN-YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~-~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+.++.++|||+|++. ..++|++|||||.++.|+||+++.+
T Consensus 8 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~--------------------------------------- 48 (123)
T 1upq_A 8 NLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSRE--------------------------------------- 48 (123)
T ss_dssp TSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTC---------------------------------------
T ss_pred CCCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCC---------------------------------------
Confidence 456789999999984 7899999999999999999997542
Q ss_pred CCCcceeEEccceEEEecCC-----CCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVRASKS-----DDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~-----d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+|.|.|.|..+.|..... ....|.|.++. |+|+|+|+|.+|++.||.||+.|+..
T Consensus 49 -~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 49 -ESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp -CSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred -cccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 2378999999998876532 23456677776 99999999999999999999999764
No 27
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.73 E-value=1.2e-17 Score=156.54 Aligned_cols=110 Identities=20% Similarity=0.273 Sum_probs=74.3
Q ss_pred cceEEEEEee-cC-CCCCceeeEEEEeC-CeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 82 ASVAGILYKW-VN-YGKGWRSRWFVLED-GVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 82 ~~~~G~L~K~-g~-~~K~Wk~RWFVL~~-g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+.++|||+|+ |+ ..|+||+|||||++ +.|+||++..+. +. ....+.|... ....
T Consensus 4 ~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~-~~-----~~~~~~i~l~-----------------~~~~ 60 (128)
T 2rlo_A 4 PIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDY-IH-----STHGKEMDLL-----------------RTTV 60 (128)
T ss_dssp EEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHH-HH-----TCSCEEEESS-----------------SCEE
T ss_pred ceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhh-cc-----ccCCCeeeee-----------------eeEE
Confidence 4799999999 54 67999999999995 899999752110 00 0000000000 0001
Q ss_pred CCcceeEEccceEEEec--------CCCCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVRAS--------KSDDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s--------~~d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..|.|.|.|..+.+... ..+...|.|+++. |+|+|+|+|.+||++||+||+.++..
T Consensus 61 ~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 61 KVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp ECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 12556666766654311 2345789999988 99999999999999999999999764
No 28
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.8e-17 Score=150.21 Aligned_cols=96 Identities=30% Similarity=0.464 Sum_probs=79.2
Q ss_pred CCCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWV-NYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g-~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+..+.++|||+|++ +..++|++|||||.++.|+||+++.+
T Consensus 8 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~--------------------------------------- 48 (117)
T 2d9y_A 8 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE--------------------------------------- 48 (117)
T ss_dssp SCCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTC---------------------------------------
T ss_pred CCCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCC---------------------------------------
Confidence 45678999999998 57899999999999999999997532
Q ss_pred CCCcceeEEccceEEEecCC-----CCCceEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVRASKS-----DDKRLTIFT-GTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~-----d~~~F~I~t-~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+|.|.|+|..+.+..... ....|.|.+ +.|+|+|+|+|.+|+++||.||+.|...
T Consensus 49 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 110 (117)
T 2d9y_A 49 -ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARV 110 (117)
T ss_dssp -CSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred -CCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHhh
Confidence 2378999999988754421 234688864 5699999999999999999999999754
No 29
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.72 E-value=9.4e-18 Score=158.08 Aligned_cols=98 Identities=20% Similarity=0.294 Sum_probs=75.4
Q ss_pred ceEEEEEeec-CCCCCceeeEEEEe---CCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 83 SVAGILYKWV-NYGKGWRSRWFVLE---DGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 83 ~~~G~L~K~g-~~~K~Wk~RWFVL~---~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
.++|||+|+| +..|+||+|||||+ +..|+||+++.. + ...
T Consensus 16 ~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~--~----------------------------------~~~ 59 (126)
T 1v5p_A 16 RICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQN--L----------------------------------AVG 59 (126)
T ss_dssp CEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTT--S----------------------------------CTT
T ss_pred ceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCC--C----------------------------------CCC
Confidence 5899999998 67899999999999 556777786321 0 122
Q ss_pred CCcceeEEccc-eEEEecC---C--CCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 159 CKPFGEIHLKV-SSVRASK---S--DDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 159 ~~p~G~I~L~~-~si~~s~---~--d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.+|.|.|.|.. +.|.... . ....|.|.++.|+|+|+|+|++||++||+||+.|....+
T Consensus 60 ~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~~~ 123 (126)
T 1v5p_A 60 AGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKSGP 123 (126)
T ss_dssp CCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTTSS
T ss_pred ceeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 35889999987 4454332 1 124688999999999999999999999999999976543
No 30
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.72 E-value=2.1e-17 Score=154.16 Aligned_cols=96 Identities=30% Similarity=0.480 Sum_probs=80.3
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCC--eEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLEDG--VLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g--~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
..+.++|||+|+++..++||+|||||.++ .|+||++..+
T Consensus 16 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~--------------------------------------- 56 (129)
T 1x05_A 16 GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGA--------------------------------------- 56 (129)
T ss_dssp SEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCC---------------------------------------
T ss_pred CCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCC---------------------------------------
Confidence 44689999999999999999999999875 9999996432
Q ss_pred CCCcceeEEccceEEEecCC--------CCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 158 QCKPFGEIHLKVSSVRASKS--------DDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~--------d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
.+|.|.|+|..+.+..... ....|.|.++. |+|+|+|+|.+|+++||.||+.|+...
T Consensus 57 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 57 -EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp -SSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred -CcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 2388999999988764422 34679999975 789999999999999999999998754
No 31
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=1.4e-17 Score=149.43 Aligned_cols=94 Identities=22% Similarity=0.380 Sum_probs=78.7
Q ss_pred CcceEEEEEeecCCC----CCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccc
Q 003938 81 SASVAGILYKWVNYG----KGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAA 156 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~----K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~ 156 (785)
.+.++|||+|++... ++|++|||||.++.|+||+++.+
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~-------------------------------------- 43 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKS-------------------------------------- 43 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTC--------------------------------------
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCC--------------------------------------
Confidence 357899999998432 89999999999999999997432
Q ss_pred cCCCcceeEEccceEEEecC---C---CCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 157 RQCKPFGEIHLKVSSVRASK---S---DDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 157 ~~~~p~G~I~L~~~si~~s~---~---d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..|.|.|.|..+.+.... . ....|.|.++. |+|+|+|+|.+|++.||.||+.|+..
T Consensus 44 --~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 44 --KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp --SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 238899999999976542 1 23578999987 99999999999999999999999865
No 32
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=2.2e-17 Score=152.63 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=77.9
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCC---eEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccc
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLEDG---VLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAA 156 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g---~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~ 156 (785)
.+..++|||+|+++ ++.||+|||||.++ +|+||+++.+
T Consensus 6 ~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d-------------------------------------- 46 (112)
T 2coc_A 6 SGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQD-------------------------------------- 46 (112)
T ss_dssp SSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTTC--------------------------------------
T ss_pred CCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCCc--------------------------------------
Confidence 34578999999876 89999999999984 8999997543
Q ss_pred cCCCcceeEEccceEEEec---CC--CCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 157 RQCKPFGEIHLKVSSVRAS---KS--DDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 157 ~~~~p~G~I~L~~~si~~s---~~--d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+|.|.|.|.++.|... .. ....|.|.++.|+|+|+|+|+++|++||+||+.|...
T Consensus 47 --~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~~~ 107 (112)
T 2coc_A 47 --GRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAAHS 107 (112)
T ss_dssp --SSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHSC
T ss_pred --cCcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHhcC
Confidence 23889999999999842 11 2346888999999999999999999999999998654
No 33
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.72 E-value=2.2e-17 Score=154.67 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=79.2
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
+.++|||+|++...|+||+|||||.++.|+||++....... ....+..+
T Consensus 12 ~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e-------------------------------~~plg~~~ 60 (124)
T 2w2x_D 12 HKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEE-------------------------------DNPLGSLC 60 (124)
T ss_dssp -CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHC-------------------------------SSCCCCSC
T ss_pred cceeEEEEEECCCCCCceEeEEEEECCEEEEEccccccccc-------------------------------ccccCCcc
Confidence 57999999999999999999999999999999974310000 01123457
Q ss_pred ceeEEccceEEEecCCC----CCceEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 162 FGEIHLKVSSVRASKSD----DKRLTIFTG---TKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d----~~~F~I~t~---~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.|.|+|..|.|.....+ ...|.|.++ .++|+|.|+|.+||++||.||+.|...
T Consensus 61 ~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 61 RGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp SEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred ccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 89999999998765432 235778775 478999999999999999999999754
No 34
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.72 E-value=7.6e-18 Score=156.56 Aligned_cols=96 Identities=25% Similarity=0.345 Sum_probs=74.3
Q ss_pred cceEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLE-DGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~-~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
+.++|||+|+|+..++||+|||||+ ++.|+||+++... .
T Consensus 8 ~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~----------------------------------------~ 47 (125)
T 1unq_A 8 IVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD----------------------------------------V 47 (125)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCS----------------------------------------H
T ss_pred eeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCCC----------------------------------------C
Confidence 5799999999999999999999999 5799999975431 1
Q ss_pred cceeEEccce-----EEEe-cCCCCCceEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 161 PFGEIHLKVS-----SVRA-SKSDDKRLTIFT----GTKTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 161 p~G~I~L~~~-----si~~-s~~d~~~F~I~t----~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
+.|.|.|..+ .+.. .......|.|.+ +.|+|+|+|+|.+|++.||.||+.|+...+.
T Consensus 48 ~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 48 DQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp HHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 3344444433 3222 234456899984 5799999999999999999999999877553
No 35
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.71 E-value=3.3e-17 Score=147.10 Aligned_cols=94 Identities=14% Similarity=0.286 Sum_probs=73.2
Q ss_pred eEEEEEeec--------CCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccc
Q 003938 84 VAGILYKWV--------NYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFA 155 (785)
Q Consensus 84 ~~G~L~K~g--------~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~ 155 (785)
|+|||+|++ ...++|++|||||+++.|+||+++.+.. .
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~----------------------------------~ 46 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAA----------------------------------S 46 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHH----------------------------------H
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccc----------------------------------c
Confidence 689999999 7889999999999999999999743200 0
Q ss_pred ccCCCcceeEEccceEEEecC---CCCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003938 156 ARQCKPFGEIHLKVSSVRASK---SDDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAA 211 (785)
Q Consensus 156 ~~~~~p~G~I~L~~~si~~s~---~d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a 211 (785)
.....+.+.|.|..+.+.... .....|.|.++. |+|+|+|+|.+|+++||.||++|
T Consensus 47 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 47 GIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TCCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred CCCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 011135678899887765432 224578998765 99999999999999999999975
No 36
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.71 E-value=4.8e-17 Score=159.75 Aligned_cols=100 Identities=19% Similarity=0.274 Sum_probs=79.9
Q ss_pred CCCcceEEEEEeecCC-----CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccc
Q 003938 79 GVSASVAGILYKWVNY-----GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLG 153 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~-----~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~ 153 (785)
...++++|||.|++.. .|+||+|||||+++.|+||+++.+
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~----------------------------------- 56 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAE----------------------------------- 56 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSS-----------------------------------
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCc-----------------------------------
Confidence 4678999999999853 357999999999999999997542
Q ss_pred ccccCCCcceeEEccceEEEec-CC--------CCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 154 FAARQCKPFGEIHLKVSSVRAS-KS--------DDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 154 ~~~~~~~p~G~I~L~~~si~~s-~~--------d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
...+.|.|.|..+..++. .. ....|.|.++.|+|+|+|+|++||++||+||+.++...+.
T Consensus 57 ----~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~ 125 (164)
T 2lul_A 57 ----KKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNN 125 (164)
T ss_dssp ----SCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSC
T ss_pred ----ccccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChh
Confidence 113779999987654432 11 1245889999999999999999999999999999876544
No 37
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=1.9e-17 Score=150.25 Aligned_cols=93 Identities=17% Similarity=0.272 Sum_probs=75.5
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
..+.++|||+|+ ..|+||+|||||+++.|+||+++.. ..
T Consensus 6 ~~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~~---------------------------------------~~ 44 (107)
T 2cof_A 6 SGLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNR---------------------------------------SK 44 (107)
T ss_dssp CCCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSSTT---------------------------------------CS
T ss_pred CCCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCcc---------------------------------------cC
Confidence 346889999999 6799999999999999999997542 11
Q ss_pred CcceeEEccceEEEecC--CCCCceEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSSVRASK--SDDKRLTIFTG-TKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s~--~d~~~F~I~t~-~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
.+.+.|.|..+.|.... .....|.|.++ .|+|+|+|+|.+|+++||.||+.|..
T Consensus 45 ~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 45 VAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EEEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred CCeeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 25677788888665443 23457889988 89999999999999999999998854
No 38
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.71 E-value=2.5e-17 Score=154.45 Aligned_cols=99 Identities=21% Similarity=0.429 Sum_probs=78.5
Q ss_pred CCcceEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 80 VSASVAGILYKW--VNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 80 ~~~~~~G~L~K~--g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
..+.++|||+|+ ++..++||+|||||+++.|+||++..+ ..
T Consensus 3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d-------------------------------------~~ 45 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDD-------------------------------------EK 45 (134)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHH-------------------------------------HT
T ss_pred CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCc-------------------------------------cc
Confidence 356899999999 888899999999999999999996421 11
Q ss_pred CCCcceeEEccceE---EEecC----CCCCceEEEe--CC------------------eEEEEEcCCHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSS---VRASK----SDDKRLTIFT--GT------------------KTLHLRCISREDRTVWIDALQA 210 (785)
Q Consensus 158 ~~~p~G~I~L~~~s---i~~s~----~d~~~F~I~t--~~------------------Rt~~L~A~S~edr~~WI~AL~~ 210 (785)
...|.|.|+|..+. |.... .....|.|.+ +. |+|+|+|+|.+|+++||.||+.
T Consensus 46 ~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~ 125 (134)
T 2y7b_A 46 RKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQ 125 (134)
T ss_dssp TSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred ccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHH
Confidence 23488999999887 33332 2345788876 32 6899999999999999999999
Q ss_pred HHHHc
Q 003938 211 AKDLF 215 (785)
Q Consensus 211 a~~~~ 215 (785)
|+..+
T Consensus 126 ~i~~~ 130 (134)
T 2y7b_A 126 VLVDI 130 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98753
No 39
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=3.5e-17 Score=152.55 Aligned_cols=95 Identities=25% Similarity=0.430 Sum_probs=78.5
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLE--DGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~--~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
..+.++|||+|++...++||+|||||. ++.|+||+.+..
T Consensus 16 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~--------------------------------------- 56 (129)
T 1x1g_A 16 GTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKE--------------------------------------- 56 (129)
T ss_dssp SEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSC---------------------------------------
T ss_pred CCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCc---------------------------------------
Confidence 346899999999999999999999998 379999997411
Q ss_pred CCCcceeEEccceEEEecCC-----------CCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVRASKS-----------DDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~-----------d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
..+|+|.|+|..+.+..... ....|.|.++. |+|+|+|+|.+|+++||.||+.|+.
T Consensus 57 ~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 57 ENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 12388999999877654322 35679999986 7899999999999999999999964
No 40
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=5.6e-17 Score=155.54 Aligned_cols=96 Identities=21% Similarity=0.225 Sum_probs=79.9
Q ss_pred CCcceEEEEEeec------CCCCCceeeEEEEeCC-----eEEEEeecCCCccccCcccCCCceeeccchhhhhhccccc
Q 003938 80 VSASVAGILYKWV------NYGKGWRSRWFVLEDG-----VLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWS 148 (785)
Q Consensus 80 ~~~~~~G~L~K~g------~~~K~Wk~RWFVL~~g-----~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~ 148 (785)
..+.++|||+|++ ...++||+|||||.++ .|.||++...
T Consensus 16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~------------------------------ 65 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI------------------------------ 65 (150)
T ss_dssp CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC------------------------------
T ss_pred CCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC------------------------------
Confidence 4568999999998 4568999999999987 9999997541
Q ss_pred cccccccccCCCcceeEEccceEEEecCC--CCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 149 SHRLGFAARQCKPFGEIHLKVSSVRASKS--DDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 149 ~~~~~~~~~~~~p~G~I~L~~~si~~s~~--d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..+|.|.|.|..+.+..... ....|.|.++. |+|+|+|+|.+|++.||.||+.|+..
T Consensus 66 ---------~~~~~g~I~L~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~ 125 (150)
T 1wg7_A 66 ---------SKEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQL 125 (150)
T ss_dssp ---------SSCCSEEECTTTCCEECCCCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCcCcEEecccCEEEecCCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 12388999999988875433 34578899985 99999999999999999999999764
No 41
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.69 E-value=9.3e-17 Score=147.71 Aligned_cols=92 Identities=16% Similarity=0.281 Sum_probs=72.9
Q ss_pred ceEEEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 83 SVAGILYKWVN----YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 83 ~~~G~L~K~g~----~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+++|||+|+++ ..++||+|||||+++.|+|||++.+
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~---------------------------------------- 40 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD---------------------------------------- 40 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSC----------------------------------------
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCC----------------------------------------
Confidence 47999997754 5789999999999999999997532
Q ss_pred CCcceeEEccceEEE---ec--CCCCCceEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVR---AS--KSDDKRLTIFT-GTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 159 ~~p~G~I~L~~~si~---~s--~~d~~~F~I~t-~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..|.|.|+|..+.+. .. ....+.|.|.+ +.++|+|+|+|++||++||+||+.|+..
T Consensus 41 ~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 41 VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp CSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 137799999865432 12 23346798875 5789999999999999999999999765
No 42
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.69 E-value=6.5e-17 Score=155.08 Aligned_cols=95 Identities=24% Similarity=0.377 Sum_probs=77.8
Q ss_pred cceEEEEEeecCC----CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 82 ASVAGILYKWVNY----GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 82 ~~~~G~L~K~g~~----~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+.++|||+|++.. .|+||+|||||+++.|+||++..+
T Consensus 17 ~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~--------------------------------------- 57 (148)
T 1u5f_A 17 VIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD--------------------------------------- 57 (148)
T ss_dssp EEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTC---------------------------------------
T ss_pred ccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCC---------------------------------------
Confidence 5799999999854 379999999999999999997532
Q ss_pred CCCcceeEEccceEEEecCC---C---CCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 158 QCKPFGEIHLKVSSVRASKS---D---DKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~---d---~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.+|.|.|.|..+++..... + ...|.|.++. |+|+|+|+|.++++.||.||+.|+....
T Consensus 58 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 122 (148)
T 1u5f_A 58 -KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLG 122 (148)
T ss_dssp -SSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC---
T ss_pred -cccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence 2388999999998875321 2 3569999986 9999999999999999999999976543
No 43
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.68 E-value=1.4e-16 Score=150.29 Aligned_cols=108 Identities=19% Similarity=0.321 Sum_probs=79.1
Q ss_pred CcceEEEEEee-----cC-CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccc
Q 003938 81 SASVAGILYKW-----VN-YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGF 154 (785)
Q Consensus 81 ~~~~~G~L~K~-----g~-~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~ 154 (785)
.+.++|||+|+ |. ..|+|++|||||+++.|+|||++...... .. .
T Consensus 11 ~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~--------------------------~~---~ 61 (129)
T 2p0d_A 11 EVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPS--------------------------SG---W 61 (129)
T ss_dssp SEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------------------------------
T ss_pred ceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCccccccc--------------------------cc---c
Confidence 46799999995 32 24899999999999999999985321000 00 0
Q ss_pred cccCCCcceeEEccceEEEecCCC---CCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 155 AARQCKPFGEIHLKVSSVRASKSD---DKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 155 ~~~~~~p~G~I~L~~~si~~s~~d---~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
......|.|.|.|..|.+...... .+.|.|.++. ++|+|+|+|.+||+.||+||+.|+...+|
T Consensus 62 ~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~~~ 128 (129)
T 2p0d_A 62 GPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVR 128 (129)
T ss_dssp -----CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhccC
Confidence 002335899999999998754222 3568998874 79999999999999999999999987654
No 44
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.68 E-value=1.4e-16 Score=147.93 Aligned_cols=103 Identities=15% Similarity=0.241 Sum_probs=78.6
Q ss_pred CCcceEEEEEeecCC--------CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccc
Q 003938 80 VSASVAGILYKWVNY--------GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHR 151 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~--------~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~ 151 (785)
..+.++|||+|++.. .++|++|||||+++.|+|||++.+...
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~------------------------------ 55 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASA------------------------------ 55 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTT------------------------------
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEccccccc------------------------------
Confidence 446899999999865 799999999999999999997532100
Q ss_pred ccccccCCCcceeEEccceEEEecC---CCCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 152 LGFAARQCKPFGEIHLKVSSVRASK---SDDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 152 ~~~~~~~~~p~G~I~L~~~si~~s~---~d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
....++.+.|.|..+.+.... .....|.|.++. |+|+|+|+|.+||++||.||+.|+...+
T Consensus 56 ----~~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 56 ----GVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp ----TCBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred ----CcccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhccC
Confidence 001123456888877665432 234578898875 9999999999999999999999988654
No 45
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.68 E-value=9.4e-17 Score=149.45 Aligned_cols=91 Identities=22% Similarity=0.335 Sum_probs=75.8
Q ss_pred CcceEEEEEe-ecCCCCC-ceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 81 SASVAGILYK-WVNYGKG-WRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 81 ~~~~~G~L~K-~g~~~K~-Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+++++|||+| .++.+|+ ||+|||||.+.+|+|||+..+
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~e---------------------------------------- 50 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEE---------------------------------------- 50 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTC----------------------------------------
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcc----------------------------------------
Confidence 4799999999 5788886 999999999999999997543
Q ss_pred CCcceeEEccceEEEecCC----CCCceEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVRASKS----DDKRLTIFTGT--------KTLHLRCISREDRTVWIDALQAA 211 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s~~----d~~~F~I~t~~--------Rt~~L~A~S~edr~~WI~AL~~a 211 (785)
..++|.|.|....|+...+ ....|.|+++. ++|.|.|+|.+|++.||.||..|
T Consensus 51 ke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 51 KEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp SCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred cccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 2388999999999886432 23467888753 59999999999999999999666
No 46
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.66 E-value=3e-16 Score=160.32 Aligned_cols=95 Identities=24% Similarity=0.364 Sum_probs=79.9
Q ss_pred CCcceEEEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccc
Q 003938 80 VSASVAGILYKWVN----YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFA 155 (785)
Q Consensus 80 ~~~~~~G~L~K~g~----~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~ 155 (785)
..+.++|||+|++. ..++||+|||||+++.|+||++..+
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~------------------------------------- 146 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD------------------------------------- 146 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTC-------------------------------------
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCC-------------------------------------
Confidence 34689999999986 4689999999999999999997542
Q ss_pred ccCCCcceeEEccceEEEecC---CC---CCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 156 ARQCKPFGEIHLKVSSVRASK---SD---DKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 156 ~~~~~p~G~I~L~~~si~~s~---~d---~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+|.|.|.|..+.+.... .+ ...|.|.++. |+|+|+|+|.++++.||.||+.|+..
T Consensus 147 ---~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 147 ---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp ---SSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ---ccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 238899999999987632 12 3579999885 99999999999999999999999864
No 47
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.65 E-value=4.3e-16 Score=152.49 Aligned_cols=95 Identities=20% Similarity=0.274 Sum_probs=65.7
Q ss_pred cceEEEEE----------eecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccc
Q 003938 82 ASVAGILY----------KWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHR 151 (785)
Q Consensus 82 ~~~~G~L~----------K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~ 151 (785)
+.++|||+ |+|+..++|++|||||+++.|+||+++.+.
T Consensus 3 v~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~-------------------------------- 50 (168)
T 2j59_M 3 AAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQ-------------------------------- 50 (168)
T ss_dssp CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------------------------------
T ss_pred CcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCccc--------------------------------
Confidence 57999999 778888999999999999999999985431
Q ss_pred ccccccCCCcceeEEccc--eEEEecC---CCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 152 LGFAARQCKPFGEIHLKV--SSVRASK---SDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 152 ~~~~~~~~~p~G~I~L~~--~si~~s~---~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
...+.|.|.|.. |.+.... .....|.|.++.|+|+|+|+|.+||+.||.||+.|+..
T Consensus 51 ------~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 51 ------TTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp --------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred ------ccccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 012557766655 5443222 23467999999999999999999999999999999653
No 48
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.63 E-value=7e-16 Score=159.26 Aligned_cols=95 Identities=23% Similarity=0.418 Sum_probs=82.1
Q ss_pred CCcceEEEEEeecCCC-----CCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccc
Q 003938 80 VSASVAGILYKWVNYG-----KGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGF 154 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~-----K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~ 154 (785)
..+.++|||+|+++.. ++||+|||||+++.|+||++..+
T Consensus 56 ~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~------------------------------------ 99 (228)
T 3tfm_A 56 QEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE------------------------------------ 99 (228)
T ss_dssp CCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC------------------------------------
T ss_pred CCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC------------------------------------
Confidence 5678999999999865 89999999999999999997532
Q ss_pred cccCCCcceeEEccceEEEec-CCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 155 AARQCKPFGEIHLKVSSVRAS-KSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 155 ~~~~~~p~G~I~L~~~si~~s-~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..|.|.|.|..+.+... ...+..|.|.++.|+|+|+|+|.+|+++||.||+.++..
T Consensus 100 ----~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 100 ----EKLKGTVEVRSAKEIIDNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp ----CSEEEEEEGGGCSEEEEETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ----cceeEEEEcCCCEEeccCCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 23889999999886543 344567999999999999999999999999999999864
No 49
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.60 E-value=3.5e-15 Score=163.35 Aligned_cols=94 Identities=23% Similarity=0.447 Sum_probs=80.1
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
+.++|||+|+|+..|+||+|||||+++.|+||++..+ ..|
T Consensus 213 ~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~----------------------------------------~~p 252 (347)
T 2r09_A 213 PDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------KEP 252 (347)
T ss_dssp CCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------SSC
T ss_pred cccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCc----------------------------------------cCC
Confidence 5899999999999999999999999999999997532 238
Q ss_pred ceeEEccceEEEecCC--CCCceEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 162 FGEIHLKVSSVRASKS--DDKRLTIFTG----------------------TKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~--d~~~F~I~t~----------------------~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
.|.|.|..+.+..... ....|.|.++ .|+|+|+|+|.+|++.||.||+.|....
T Consensus 253 ~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 253 RGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp SEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred cEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 8999999998775543 3456888865 4899999999999999999999998753
No 50
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.60 E-value=1.9e-15 Score=167.65 Aligned_cols=94 Identities=27% Similarity=0.418 Sum_probs=77.1
Q ss_pred CcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 81 SASVAGILYKWVNYG-KGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~-K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
...++|||+|+|+.. |+||+|||||+++.|+||+++.+ .
T Consensus 268 ~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d----------------------------------------~ 307 (386)
T 3lju_X 268 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLD----------------------------------------A 307 (386)
T ss_dssp CCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTC----------------------------------------S
T ss_pred ccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCC----------------------------------------c
Confidence 357899999999988 99999999999999999997543 1
Q ss_pred CcceeEEccceE----EEec--CCC-----CCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSS----VRAS--KSD-----DKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 160 ~p~G~I~L~~~s----i~~s--~~d-----~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.|+|.|.|..+. +... ... ...|.|.++.|+|+|+|+|.+||++||.||+.|+..
T Consensus 308 ~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 308 FARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp BCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred ccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 378999995432 3322 111 245899999999999999999999999999999875
No 51
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.59 E-value=3.2e-15 Score=157.75 Aligned_cols=103 Identities=17% Similarity=0.319 Sum_probs=81.6
Q ss_pred CCcceEEEEE--------eecCC----CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccc
Q 003938 80 VSASVAGILY--------KWVNY----GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANW 147 (785)
Q Consensus 80 ~~~~~~G~L~--------K~g~~----~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~ 147 (785)
..+.++|||+ |+|.. .|+||+|||||+++.|+|||++.....
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~-------------------------- 62 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNST-------------------------- 62 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC-----------------------------
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCccccc--------------------------
Confidence 3468999999 77776 899999999999999999997542100
Q ss_pred ccccccccccCCCcceeEEccceEEEecCC---CCCceEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 148 SSHRLGFAARQCKPFGEIHLKVSSVRASKS---DDKRLTIFT-GTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 148 ~~~~~~~~~~~~~p~G~I~L~~~si~~s~~---d~~~F~I~t-~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.....|.|.|.|..+.+..... ....|.|.+ +.|+|+|+|+|.+||+.||.||+.|....+
T Consensus 63 --------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 63 --------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp -----------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 0123488999999888774322 345789998 689999999999999999999999988765
No 52
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.56 E-value=5.8e-15 Score=155.82 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=75.2
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCC-------eEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccc
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDG-------VLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLG 153 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g-------~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~ 153 (785)
.+.++|||+|+ |+||+|||||+++ .|+||+++.+. .
T Consensus 9 ~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~--~------------------------------- 51 (264)
T 1qqg_A 9 DVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKW--R------------------------------- 51 (264)
T ss_dssp CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHH--H-------------------------------
T ss_pred CccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCccc--c-------------------------------
Confidence 46899999999 8999999999988 99999974320 0
Q ss_pred ccccCCCcceeEEccceEEEe-c--CCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 154 FAARQCKPFGEIHLKVSSVRA-S--KSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 154 ~~~~~~~p~G~I~L~~~si~~-s--~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
....+|+|.|+|..+..+. . ......|.|.|+.|+|+|+|+|.+|+++||.||+.++...
T Consensus 52 --~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 52 --HKSSAPKRSIPLESCFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp --TTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred --ccccCcceEEEeeceEEEEeccCCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 0012488999999887332 2 2334679999999999999999999999999999997653
No 53
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.56 E-value=4.7e-15 Score=137.80 Aligned_cols=104 Identities=14% Similarity=0.252 Sum_probs=76.6
Q ss_pred CCCcceEEEEEeecC--------CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccc
Q 003938 79 GVSASVAGILYKWVN--------YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSH 150 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~--------~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~ 150 (785)
+.++.++|||+|+.. ..++|++|||||+++.|+|||++.+.+.. |
T Consensus 5 ~~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~------------~--------------- 57 (122)
T 1dro_A 5 GAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSN------------P--------------- 57 (122)
T ss_dssp CSSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHC------------T---------------
T ss_pred CCceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccC------------C---------------
Confidence 456789999998753 45889999999999999999985431100 0
Q ss_pred cccccccCCCcceeEEccceEEEecC---CCCCceEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 151 RLGFAARQCKPFGEIHLKVSSVRASK---SDDKRLTIFT-GTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 151 ~~~~~~~~~~p~G~I~L~~~si~~s~---~d~~~F~I~t-~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.....+.+.|+|..+.+.... ...+.|.|.+ +.++|+|+|+|.+||++||.||+.|+..
T Consensus 58 -----~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 58 -----ELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp -----TCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred -----CcccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 000113477888877655332 2335688986 6799999999999999999999999763
No 54
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.56 E-value=6.1e-15 Score=163.22 Aligned_cols=93 Identities=20% Similarity=0.272 Sum_probs=75.4
Q ss_pred CcceEEEEEeecCCC---CCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 81 SASVAGILYKWVNYG---KGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~---K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
++.++|||+|+|..+ +.|++|||||++|.|+||++ ++
T Consensus 277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~--------------------------------------- 316 (385)
T 2q13_A 277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GD--------------------------------------- 316 (385)
T ss_dssp CSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SC---------------------------------------
T ss_pred CccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CC---------------------------------------
Confidence 458999999998763 36999999999999999997 21
Q ss_pred CCCcceeEEccceEEEecCCCCC--ceEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 158 QCKPFGEIHLKVSSVRASKSDDK--RLTIFTGT--KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~d~~--~F~I~t~~--Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..+.|.|.|..|++......++ .|.|.|+. |+|+|+|+|.+||+.||.||+.|+..
T Consensus 317 -~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~ 376 (385)
T 2q13_A 317 -VAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQ 376 (385)
T ss_dssp -SSCEEEEECTTCEEEEECCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTT
T ss_pred -cCCCceEEccceEEEeccccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 1156899999999886654444 57899998 99999999999999999999999765
No 55
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.55 E-value=4e-15 Score=165.87 Aligned_cols=95 Identities=22% Similarity=0.204 Sum_probs=78.8
Q ss_pred CCcceEEEEEee---cCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccc
Q 003938 80 VSASVAGILYKW---VNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAA 156 (785)
Q Consensus 80 ~~~~~~G~L~K~---g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~ 156 (785)
.++.++|||+|+ |..+++|++|||||++|.|+||+....
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~-------------------------------------- 340 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAV-------------------------------------- 340 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCS--------------------------------------
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCC--------------------------------------
Confidence 456899999998 555688999999999999999985221
Q ss_pred cCCCcceeEEccceEEEecCCCCCc--eEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 157 RQCKPFGEIHLKVSSVRASKSDDKR--LTIFTGT--KTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 157 ~~~~p~G~I~L~~~si~~s~~d~~~--F~I~t~~--Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
.+.+.|.|..|+|......+++ |.|.+++ |+|+|+|+|.+||+.||.||+.|+...
T Consensus 341 ---~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 341 ---AGGLIQDLDNCSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp ---SCCCCBCSSCCEEEEECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred ---CCCeEEECCceEEEECCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 2557888999999877666665 6688874 799999999999999999999998753
No 56
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.53 E-value=1.7e-14 Score=159.95 Aligned_cols=93 Identities=20% Similarity=0.325 Sum_probs=76.7
Q ss_pred cceEEEEEeecCCCCCceeeEEEE--eCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVL--EDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL--~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
..++|||+|+|...|+||+||||| .++.|+||+++.+ .
T Consensus 146 ~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~~----------------------------------------~ 185 (386)
T 3lju_X 146 GYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDA----------------------------------------K 185 (386)
T ss_dssp SEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC---------------------------------------------
T ss_pred cccccceeeeccccCCceEEEEEEEcCCCEEEEECCCCc----------------------------------------c
Confidence 579999999999999999999999 8999999997532 2
Q ss_pred CcceeEEccceEEEecC---CCCCceEEE----eCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSSVRASK---SDDKRLTIF----TGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s~---~d~~~F~I~----t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
+|+|.|.|....+.... .....|.|. +++|+|+|+|+|.+|+.+||+||+.|+..
T Consensus 186 ~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~~ 247 (386)
T 3lju_X 186 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFH 247 (386)
T ss_dssp CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhcccc
Confidence 48999999987665432 455678886 77899999999999999999999998643
No 57
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.50 E-value=4.8e-14 Score=149.02 Aligned_cols=93 Identities=17% Similarity=0.286 Sum_probs=71.7
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
..+.++|||+|+|+..|+||+|||||+++.|+||++..+.
T Consensus 166 ~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~---------------------------------------- 205 (291)
T 3tca_A 166 IVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTK---------------------------------------- 205 (291)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCS----------------------------------------
T ss_pred CCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccc----------------------------------------
Confidence 4568999999999999999999999999999999975431
Q ss_pred Cccee---EEccceEEEecC--------CCCCceEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHH
Q 003938 160 KPFGE---IHLKVSSVRASK--------SDDKRLTIFTGT------KTLHLRCISREDRTVWIDALQAAK 212 (785)
Q Consensus 160 ~p~G~---I~L~~~si~~s~--------~d~~~F~I~t~~------Rt~~L~A~S~edr~~WI~AL~~a~ 212 (785)
++.|. +++.++.+.... .....|.|.++. |+|+|+|+|+++|..||.||+.|+
T Consensus 206 ~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 206 TSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp STTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 13333 445555554321 123468888753 679999999999999999999986
No 58
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.46 E-value=4e-13 Score=125.65 Aligned_cols=105 Identities=20% Similarity=0.315 Sum_probs=74.5
Q ss_pred CcceEEEEEeec-----C--CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccc
Q 003938 81 SASVAGILYKWV-----N--YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLG 153 (785)
Q Consensus 81 ~~~~~G~L~K~g-----~--~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~ 153 (785)
.+.++|||+|+. . ..++|++|||||+++.|+|||++...... | ...
T Consensus 7 ~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~------------~-------------~~~-- 59 (124)
T 3pp2_A 7 TLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAG------------G-------------LRQ-- 59 (124)
T ss_dssp --CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---------------C-------------BCC--
T ss_pred cEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCcccccc------------C-------------ccC--
Confidence 357999999872 1 22589999999999999999975431100 0 000
Q ss_pred ccccCCCcceeEEccceEEEecC----CCCCceEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 154 FAARQCKPFGEIHLKVSSVRASK----SDDKRLTIFTG-TKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 154 ~~~~~~~p~G~I~L~~~si~~s~----~d~~~F~I~t~-~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
......|.+.|.|..|.+.... ...+.|.|.++ +++|+|+|+|.+||+.||.||+.|+.
T Consensus 60 -~~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 60 -PSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp -GGGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred -cccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 0000247799999998876542 12456888875 58999999999999999999999974
No 59
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.45 E-value=2.1e-13 Score=126.83 Aligned_cols=94 Identities=18% Similarity=0.308 Sum_probs=71.2
Q ss_pred ceEEEEEe--ecCCCC-CceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 83 SVAGILYK--WVNYGK-GWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 83 ~~~G~L~K--~g~~~K-~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
.++|||.+ +|+..| +|++|||||.++.|+||+.+.. ....
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~-------------------------------------~~~~ 44 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQD-------------------------------------KEQS 44 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHH-------------------------------------HHTT
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCC-------------------------------------cccC
Confidence 46999996 888888 9999999999999999997431 0122
Q ss_pred CcceeEEccceEEEec-C--------C--CCCceEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSSVRAS-K--------S--DDKRLTIFT------GTKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s-~--------~--d~~~F~I~t------~~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
+|.|.|+|.....+.+ . . .++.|.|.+ +.|+|+|.|+|.+|+++||.||+.++.
T Consensus 45 ~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 45 NPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp CCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred CceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 4778999865443111 1 1 124599875 359999999999999999999998753
No 60
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.45 E-value=7.7e-13 Score=124.52 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=78.2
Q ss_pred ceEEEEEee-----cCC--CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccc
Q 003938 83 SVAGILYKW-----VNY--GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFA 155 (785)
Q Consensus 83 ~~~G~L~K~-----g~~--~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~ 155 (785)
.|+|+|.+. |.. .++|++|||||.++.|+||+.+.-.. . + ..
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~-~--------------~----------------~~ 50 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRG-T--------------D----------------RK 50 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCC-S--------------S----------------GG
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEccccccc-c--------------c----------------cc
Confidence 578999854 654 58999999999999999999643100 0 0 01
Q ss_pred ccCCCcceeEEccceEEEecCC--CCCceEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 156 ARQCKPFGEIHLKVSSVRASKS--DDKRLTIFTG--TKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 156 ~~~~~p~G~I~L~~~si~~s~~--d~~~F~I~t~--~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.....|.|.|.|.++.|...+. .+.-|.|.++ +..|.|+|+|.++++.||+||..|....+
T Consensus 51 ~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~ 115 (126)
T 2dtc_A 51 HYKSTPGKKVSIVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSR 115 (126)
T ss_dssp GBCSSCSEEEECTTCEEECCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCC
T ss_pred ccccCCCceEEeCCCEEEecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCC
Confidence 1233589999999999974322 2356899865 78999999999999999999999987543
No 61
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=2.1e-13 Score=128.99 Aligned_cols=94 Identities=22% Similarity=0.455 Sum_probs=74.6
Q ss_pred cceEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 82 ASVAGILYKWV---NYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 82 ~~~~G~L~K~g---~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+.+++||...+ ..+|+||+|||||.|+.|+|||++.+. .
T Consensus 9 pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~--------------------------------------~ 50 (137)
T 2ys3_A 9 PELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEA--------------------------------------P 50 (137)
T ss_dssp CCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTT--------------------------------------T
T ss_pred cchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhc--------------------------------------c
Confidence 47889999976 345899999999999999999986541 1
Q ss_pred CCcceeEEccceEEEecC-CCCCceE--EEe----CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVRASK-SDDKRLT--IFT----GTKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s~-~d~~~F~--I~t----~~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
..|.|.|+|.+|.|.... .....|. +.. |+|+|+|+|+|+++++.||.||+.|..
T Consensus 51 ~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 51 GDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp SCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence 238999999999987542 1245565 333 459999999999999999999998863
No 62
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.39 E-value=2.3e-12 Score=124.05 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=80.7
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhc-ccccccc------c---
Q 003938 83 SVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRK-ANWSSHR------L--- 152 (785)
Q Consensus 83 ~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~-~~~~~~~------~--- 152 (785)
.++|||+|++...|.|++|||||.++.|+|++......-+...+..+ .+...-.+.-. ..|.++. +
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~----~~~~~~~~~~~~n~~fh~~~~~~~e~~~~ 77 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPK----EASGSTELHSSLEVLFQGPNPAILEPERE 77 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSC----CCCCSCCCCCCSSSGGGSSCSTTSCTTCS
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCccccc----ccCCchhhcccchhccccCCccccchhHh
Confidence 57999999999999999999999999999999432110000001000 00000000000 0000000 0
Q ss_pred ---cccccCCCcceeEEccceEEEecCC----CCCceEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 153 ---GFAARQCKPFGEIHLKVSSVRASKS----DDKRLTIFTG---TKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 153 ---~~~~~~~~p~G~I~L~~~si~~s~~----d~~~F~I~t~---~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
.....+.-++|.|+|.+|.|..... ....|.|.++ .++|.|.|+|.+++.+||+||+.|..
T Consensus 78 ~l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 78 HLDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp SSCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0112344468999999999986643 2245778876 46999999999999999999999974
No 63
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=6e-12 Score=117.02 Aligned_cols=97 Identities=21% Similarity=0.187 Sum_probs=76.0
Q ss_pred CCCcceEEEEEeec--CCCCCceeeEEEEeC------CeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccc
Q 003938 79 GVSASVAGILYKWV--NYGKGWRSRWFVLED------GVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSH 150 (785)
Q Consensus 79 ~~~~~~~G~L~K~g--~~~K~Wk~RWFVL~~------g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~ 150 (785)
+..+.++|||+++. ..+|.||+|||||.. .-|-||..+.. .
T Consensus 9 ~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek--~----------------------------- 57 (127)
T 2d9w_A 9 GDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEK--P----------------------------- 57 (127)
T ss_dssp CCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSC--S-----------------------------
T ss_pred cCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCc--c-----------------------------
Confidence 45678999999997 577889999999965 47999997542 1
Q ss_pred cccccccCCCcceeEEccceEEEecCCCC-------CceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003938 151 RLGFAARQCKPFGEIHLKVSSVRASKSDD-------KRLTIFTGTKTLHLRCISREDRTVWIDALQAAK 212 (785)
Q Consensus 151 ~~~~~~~~~~p~G~I~L~~~si~~s~~d~-------~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~ 212 (785)
..+..++..|.|+.|.-+.....+ ..|.|.|+.|+|.|.|++ .++.+||.+|...+
T Consensus 58 -----~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~-~E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 58 -----RRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPA-AERGDWVQAICLLA 120 (127)
T ss_dssp -----SSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECH-HHHHHHHHHHHHHH
T ss_pred -----ccCCCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCc-HHHHHHHHHHHHHh
Confidence 122347899999988855432222 568999999999999996 58999999998874
No 64
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.28 E-value=1.8e-11 Score=118.52 Aligned_cols=95 Identities=20% Similarity=0.389 Sum_probs=75.6
Q ss_pred cceEEEEEeecC---CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 82 ASVAGILYKWVN---YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 82 ~~~~G~L~K~g~---~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+.+++||..... -.|+||+||||++|+.|+|||++.+ ..
T Consensus 47 PeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe--------------------------------------~~ 88 (173)
T 4f7h_A 47 PELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEE--------------------------------------SS 88 (173)
T ss_dssp TCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGG--------------------------------------CS
T ss_pred hhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhH--------------------------------------hc
Confidence 368899977542 3599999999999999999998653 11
Q ss_pred CCcceeEEccceEEEecC-CCCCceEE---Ee---CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVRASK-SDDKRLTI---FT---GTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s~-~d~~~F~I---~t---~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..|.|.|.|++|.|.... ....+|.| ++ +++.++|+|+|++.+.+||.|++.|..-
T Consensus 89 geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAskG 151 (173)
T 4f7h_A 89 GTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKG 151 (173)
T ss_dssp SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred CCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhhccC
Confidence 238999999999998652 33455543 22 6799999999999999999999999654
No 65
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.28 E-value=4.1e-12 Score=142.04 Aligned_cols=95 Identities=27% Similarity=0.384 Sum_probs=69.5
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLE-DGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~-~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+.+.++|||.|+|+..|+||+|||||+ ++.|.|||++...
T Consensus 4 ~~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~--------------------------------------- 44 (446)
T 4ejn_A 4 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD--------------------------------------- 44 (446)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-----------------------------------------
T ss_pred ceEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCCC---------------------------------------
Confidence 457899999999999999999999997 8999999986531
Q ss_pred CCcceeEEccc-----eEEEec-CCCCCceEEEeCC-eEE---EEEcCCHHHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKV-----SSVRAS-KSDDKRLTIFTGT-KTL---HLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 159 ~~p~G~I~L~~-----~si~~s-~~d~~~F~I~t~~-Rt~---~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+.|.|.|.. |.+... ...++.|.|.+.. +++ .|++++.++++.|+.||+.+...
T Consensus 45 -~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~ 109 (446)
T 4ejn_A 45 -VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADG 109 (446)
T ss_dssp ------CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred -CccCcccccCccccceeecCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhh
Confidence 1335555544 443322 2335689998753 333 68899999999999999999653
No 66
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.25 E-value=3.3e-11 Score=115.56 Aligned_cols=94 Identities=21% Similarity=0.419 Sum_probs=72.5
Q ss_pred cceEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 82 ASVAGILYKWV---NYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 82 ~~~~G~L~K~g---~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+.++|||.... -..|+||+||||++|+.|+|||++.+. .
T Consensus 26 PeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~--------------------------------------~ 67 (165)
T 4bbk_A 26 PKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELE--------------------------------------Q 67 (165)
T ss_dssp CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGT--------------------------------------T
T ss_pred hhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHh--------------------------------------c
Confidence 36889998754 346999999999999999999986531 1
Q ss_pred CCcceeEEccceEEEec-CCCCCceEEE---e---CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSSVRAS-KSDDKRLTIF---T---GTKTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 159 ~~p~G~I~L~~~si~~s-~~d~~~F~I~---t---~~Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
..|.+.|.|++|.|... .....+|.|. . +...++|+|+|+.++.+||.|++.|..
T Consensus 68 geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 68 GEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred CCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 23899999999999864 2344555432 2 468999999999999999999999965
No 67
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.21 E-value=3.2e-11 Score=116.01 Aligned_cols=94 Identities=19% Similarity=0.068 Sum_probs=77.7
Q ss_pred CCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 78 GGVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 78 ~~~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
.|..+.+.|+|.|+.+.+ ||+|||+|.++-+.||-+...
T Consensus 48 ~ge~Ilk~G~v~KrkGl~--~kkR~liLT~~PrL~Yvdp~~--------------------------------------- 86 (151)
T 1w1g_A 48 ENNLILKMGPVDKRKGLF--ARRRQLLLTEGPHLYYVDPVN--------------------------------------- 86 (151)
T ss_dssp TTCCEEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT---------------------------------------
T ss_pred CCCcEEEEEEEEecccCc--ceeEEEEEcCCceEEEEcCcc---------------------------------------
Confidence 578889999999976654 999999999999899987332
Q ss_pred CCCcceeEEccceEEEecCCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 158 QCKPFGEIHLKVSSVRASKSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
...+|+|.|..+.-.+..+ ++.|.|+|+.|||+|.|. ..+++.|++||+.++..+
T Consensus 87 -~~~KGeIpls~~l~ve~k~-~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~ 141 (151)
T 1w1g_A 87 -KVLKGEIPWSQELRPEAKN-FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQR 141 (151)
T ss_dssp -TEEEEEECCCTTCEEEESS-SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHH
T ss_pred -ccccceEecCCCeeEEEcC-CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHH
Confidence 1267999998765444444 679999999999999987 889999999999998764
No 68
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.14 E-value=6.5e-11 Score=125.40 Aligned_cols=102 Identities=20% Similarity=0.283 Sum_probs=75.2
Q ss_pred CCcceEEEEEee-----cC-------CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccc
Q 003938 80 VSASVAGILYKW-----VN-------YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANW 147 (785)
Q Consensus 80 ~~~~~~G~L~K~-----g~-------~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~ 147 (785)
..+.++|||.++ +. ..++|++|||||.++.|+||+++......
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~------------------------- 63 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGID------------------------- 63 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC-------------------------------
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccc-------------------------
Confidence 346799999753 21 24789999999999999999985431110
Q ss_pred ccccccccccCCCcceeEEccceEEEecCC---CCCceEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 148 SSHRLGFAARQCKPFGEIHLKVSSVRASKS---DDKRLTIFT-GTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 148 ~~~~~~~~~~~~~p~G~I~L~~~si~~s~~---d~~~F~I~t-~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
....|.+.|.|..+.+..... ....|.|.+ ..++|.|+|+|.+||+.||.||+.|...+
T Consensus 64 ---------~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 64 ---------HNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp -----------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ---------cccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 122377899999999874322 234688876 57899999999999999999999998764
No 69
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.08 E-value=4e-10 Score=118.10 Aligned_cols=95 Identities=20% Similarity=0.165 Sum_probs=70.4
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
....++|||++++...|.|++|||+|+++.|+||+.... +
T Consensus 130 ~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~s-k--------------------------------------- 169 (256)
T 3hk0_A 130 SSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTS-A--------------------------------------- 169 (256)
T ss_dssp SCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTC-C---------------------------------------
T ss_pred CCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCC-C---------------------------------------
Confidence 445799999999888899999999999999988885321 0
Q ss_pred Cccee---EEccceEEEecC--------CCCCceEEEeCCe------EEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 160 KPFGE---IHLKVSSVRASK--------SDDKRLTIFTGTK------TLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 160 ~p~G~---I~L~~~si~~s~--------~d~~~F~I~t~~R------t~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.+++. ++|....|.... ..+..|.|.+... .++|+|++++++..||.||+.|+--
T Consensus 170 ~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 170 APRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYG 241 (256)
T ss_dssp CGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred ccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 12232 577776665432 1133566775532 6999999999999999999999753
No 70
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.03 E-value=8.2e-10 Score=117.15 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=70.8
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 80 VSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 80 ~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
..+.++|||++++...|.|++|||||+++.|+||+.... + ...
T Consensus 156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~s-k------------------------------------~~r 198 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKA-K------------------------------------VSR 198 (281)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC----------------------------------------------
T ss_pred CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCC-C------------------------------------ccc
Confidence 345799999999988899999999999999998886321 0 001
Q ss_pred CcceeEEccceEEEecC--------CCCCceEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSSVRASK--------SDDKRLTIFTG------TKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s~--------~d~~~F~I~t~------~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
...+.++|..+.|-... ..+..|.|..+ ..+++|+|++++++..||.||+.|+--
T Consensus 199 ~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 199 DLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhC
Confidence 13466678877765421 22456778764 357999999999999999999999753
No 71
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.42 E-value=7.3e-07 Score=82.89 Aligned_cols=94 Identities=15% Similarity=0.237 Sum_probs=72.0
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 79 GVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+..+.++||+-+.++.-+.||||||+|+...+.||++..+
T Consensus 5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~~---------------------------------------- 44 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTT---------------------------------------- 44 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSC----------------------------------------
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCCC----------------------------------------
Confidence 4457899999999999999999999999999999998533
Q ss_pred CCcceeEEccc-eEEEec--------CCCCCceEEEeCCeEEEEEcC-----------CHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKV-SSVRAS--------KSDDKRLTIFTGTKTLHLRCI-----------SREDRTVWIDALQAAK 212 (785)
Q Consensus 159 ~~p~G~I~L~~-~si~~s--------~~d~~~F~I~t~~Rt~~L~A~-----------S~edr~~WI~AL~~a~ 212 (785)
.++.-+|.|.. -.+... ...+.-|.|.|..++|++.++ -.+.+..|..||+.|.
T Consensus 45 ~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 45 NRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp SSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred CceeeeeehhHeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 23556666652 222222 123466999999999999874 1367999999999985
No 72
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=4.9e-06 Score=77.63 Aligned_cols=95 Identities=15% Similarity=0.205 Sum_probs=71.9
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccC
Q 003938 79 GVSASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQ 158 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~ 158 (785)
+..+.++||+-+.++.-+.||++|++|+...|.||++....
T Consensus 5 ~s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~--------------------------------------- 45 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGS--------------------------------------- 45 (129)
T ss_dssp CTTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSSCC---------------------------------------
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCCCC---------------------------------------
Confidence 34568899999999999999999999999999999985431
Q ss_pred CCcceeEEccceE-EEe--------cCCCCCceEEEeCCeEEEEEcCC---------------HHHHHHHHHHHHHHHH
Q 003938 159 CKPFGEIHLKVSS-VRA--------SKSDDKRLTIFTGTKTLHLRCIS---------------REDRTVWIDALQAAKD 213 (785)
Q Consensus 159 ~~p~G~I~L~~~s-i~~--------s~~d~~~F~I~t~~Rt~~L~A~S---------------~edr~~WI~AL~~a~~ 213 (785)
++.-+|.|...- +.. ....+.-|.|.|.+.+|++.++. .+.+..|..||+.|..
T Consensus 46 -k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 46 -KYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp -SCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred -ceeceeeHHHhcccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 233445554221 111 11223679999999999998753 7999999999999964
No 73
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.09 E-value=2.6e-06 Score=87.51 Aligned_cols=38 Identities=24% Similarity=0.521 Sum_probs=34.2
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGP 118 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~ 118 (785)
.+..+|||+|+|+.+|+||+|||||+++.|.||+..++
T Consensus 20 ~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~~ 57 (228)
T 3tfm_A 20 SPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQE 57 (228)
T ss_dssp -CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCCC
T ss_pred CCceEEEEeecCcccccceEEEEEEeCCEEEEeccCCC
Confidence 46789999999999999999999999999999997543
No 74
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.76 E-value=0.00014 Score=72.45 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=76.8
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
...+|-|..+.+.+ .|+.||++|=+.+|.|-+-++ ++..+.. ... .
T Consensus 71 Ll~eG~L~~k~~~~-~~~d~~~fLf~D~Ll~~~~~~-~ky~~~~-------------------------------~~~-~ 116 (185)
T 2lg1_A 71 LVRDGSVFLKNAAG-RLKEVQAVLLTDILVFLQEKD-QKYIFAS-------------------------------LDQ-K 116 (185)
T ss_dssp EEEEEEEEEECTTC-CEEEEEEEEESSEEECCEEET-TEEECCC-------------------------------CSS-S
T ss_pred eeeeceEEEeccCC-CeeeEEEEeecCEEEEEEecC-CEEEEEc-------------------------------ccC-C
Confidence 47899998665554 699999999999999987543 2222110 000 1
Q ss_pred ceeEEccceEEEecCCCCCceEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 162 FGEIHLKVSSVRASKSDDKRLTIFT----GTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d~~~F~I~t----~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
...|.|....|+....+++.|.++. +.+.|.|.|.|.+||..||++|+.|+..++
T Consensus 117 ~pvi~L~~~~vre~a~d~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 117 STVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp CSEEESSSCEEECCSSCSSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEeecceEEeccCCCCCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 3567888888887767778888775 358999999999999999999999998875
No 75
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.48 E-value=0.00039 Score=70.62 Aligned_cols=96 Identities=21% Similarity=0.261 Sum_probs=69.8
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeC------C-eEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccc
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLED------G-VLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLG 153 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~------g-~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~ 153 (785)
.+++||+...+.+ |.||+||+||+. . .|.-||++.+
T Consensus 8 ~~v~eg~vk~r~~--KkWk~rw~vlrk~s~~adcl~L~vYkd~~d----------------------------------- 50 (224)
T 3ml4_A 8 AALVEGQVKLRDG--KKWKSRWLVLRKPSPVADCLLMLVYKDKCE----------------------------------- 50 (224)
T ss_dssp CCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHH-----------------------------------
T ss_pred ceeEEEeeeeecC--CceeeEEEEEEcCCCchheEEEEEEcChhh-----------------------------------
Confidence 3588999988765 789999999964 2 5778886432
Q ss_pred ccccCCCcceeEEccceEEEec----CCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 154 FAARQCKPFGEIHLKVSSVRAS----KSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 154 ~~~~~~~p~G~I~L~~~si~~s----~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..++.+++.+|.|....=.++ +.....+.|++...++.|..+|++.+.+|-..|+.....
T Consensus 51 -r~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~slGe 114 (224)
T 3ml4_A 51 -RSKGLRERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYALGE 114 (224)
T ss_dssp -HHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHHTSS
T ss_pred -hhcCCcccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhccCC
Confidence 123445788888886654333 333456679999999999999999999999999875433
No 76
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=97.47 E-value=0.00026 Score=78.84 Aligned_cols=95 Identities=23% Similarity=0.175 Sum_probs=67.4
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
....+|.|.+..+ ++++.|||.|-++.|.|.|.....+ -.
T Consensus 243 ~li~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~~~~--------------------------------------y~ 282 (434)
T 3mpx_A 243 EFLKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQKDGK--------------------------------------YR 282 (434)
T ss_dssp CEEECCEEEEEET--TEEEEEEEEEESSEEEEEEECTTSC--------------------------------------EE
T ss_pred ceEecceEEEEeC--CCceEEEEEEECCEEEEEEecCCCe--------------------------------------EE
Confidence 3478899988764 5689999999999999999643211 11
Q ss_pred cceeEEccceEEEecCC--CCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 161 PFGEIHLKVSSVRASKS--DDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~--d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
.++.|.|....+..... ....|.|.++.++|.|.|.|.++++.||++|+.|+...
T Consensus 283 ~k~~i~L~~l~v~~~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 283 LKNTLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp EEEEEEC-----CCCCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred EEEEEEcCCcEEEecCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 45677777766653322 34678899999999999999999999999999998754
No 77
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.40 E-value=0.001 Score=73.77 Aligned_cols=111 Identities=14% Similarity=0.205 Sum_probs=76.5
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
...+|.|.++++. +.|+.|||.|-++.|.|.+.++. +..+... +....| . ......-
T Consensus 295 li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~-k~~~~~~---~~~~~~---------------~---~~~~~~~ 351 (418)
T 3t06_A 295 MIHEGPLTWRISK-DKTLDLHVLLLEDLLVLLQKQDE-KLLLKCH---SKTAVG---------------S---SDSKQTF 351 (418)
T ss_dssp EEEEEEEEECCBT-TBCCEEEEEEESSEEEEEEECSS-CEECCC----------------------------------CC
T ss_pred eEEeceEEEEeCC-CCeEEEEEEecCCEEEEEEEcCC-ceEEeec---cccccc---------------C---CCccccc
Confidence 4789999977643 35999999999999999986532 1110000 000000 0 0011224
Q ss_pred ceeEEccceEEEecCCCCCceEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 162 FGEIHLKVSSVRASKSDDKRLTIFTG-----TKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d~~~F~I~t~-----~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
++.|.|....|.....+.+.|.|... .++|.|+|.|.++++.||++|+.|+.-.
T Consensus 352 k~~i~l~~~~v~~~~~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~ 410 (418)
T 3t06_A 352 SPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 410 (418)
T ss_dssp CSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CCceechhceeccccccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 57888988888877778888987763 3899999999999999999999998764
No 78
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.29 E-value=0.0021 Score=69.91 Aligned_cols=110 Identities=15% Similarity=0.224 Sum_probs=74.0
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
..++|.|.+.+. .+.++.|+|.|-++.|.|.+..+. +..+... .+ ...|. ......-
T Consensus 253 li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~-k~~~~~~-~~--~~~~~------------------~~~~~~~ 309 (368)
T 1xcg_A 253 MIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDE-KLLLKCH-SK--TAVGS------------------SDSKQTF 309 (368)
T ss_dssp EEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSS-CEECCC----------------------------------CC
T ss_pred EEeecceEeeec-CCCeeEEEEEcccccHHHhhcccc-cceeeec-cc--cccCC------------------CCcccCc
Confidence 468999986543 356899999999999999986532 1110000 00 00000 0011124
Q ss_pred ceeEEccceEEEecCCCCCceEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 162 FGEIHLKVSSVRASKSDDKRLTIFTG-----TKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d~~~F~I~t~-----~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
++.|.|....+.....+.+.|.|++. .++|.|+|.|.++++.||++|+.|+..
T Consensus 310 ~~~i~l~~~~v~~~~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 310 SPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp CSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCceEccceeeecccCCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 57888988887765567788987653 489999999999999999999999764
No 79
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=97.28 E-value=0.0034 Score=57.56 Aligned_cols=97 Identities=9% Similarity=0.019 Sum_probs=67.5
Q ss_pred cceEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 82 ASVAGILYKWVNY-GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 82 ~~~~G~L~K~g~~-~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.+.+|.|.|-... .|.=++++|.|=+.+|.|-+...... +. .+
T Consensus 8 lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~--------~~----------------------------~~ 51 (113)
T 1zc3_B 8 LVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRR--------GM----------------------------YR 51 (113)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTT--------SC----------------------------EE
T ss_pred EEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCc--------cc----------------------------EE
Confidence 4678999987642 23345589999999999988632100 00 01
Q ss_pred cceeEEccceEEEec---CCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 161 PFGEIHLKVSSVRAS---KSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 161 p~G~I~L~~~si~~s---~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
-...+.|....+... ..-.+.|.|.++.+++.++|+|.+|+.+||.+|+.|+..
T Consensus 52 ~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 52 YNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EEEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 223455655444322 233578999999999999999999999999999999754
No 80
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.25 E-value=0.00099 Score=62.96 Aligned_cols=98 Identities=16% Similarity=0.186 Sum_probs=70.2
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
..+++.+. +....+.=+-|+|+|-++.|.|.+.... . .+-.-
T Consensus 29 i~~s~v~~-~~~~~~~~~eR~l~LF~~~Ll~~s~~~~---------~----------------------------~~f~~ 70 (132)
T 1v61_A 29 IFMSQVVM-QHGACEEKEERYFLLFSSVLIMLSASPR---------M----------------------------SGFMY 70 (132)
T ss_dssp SCEEEEEB-CCSSSSCCCEEEEEECSSCEEEEECSSS---------S----------------------------SCCEE
T ss_pred EEEeeEEE-EEcccCcceEEEEEEcCCeEEEEEecCC---------C----------------------------ceEEE
Confidence 44444444 4333345578999999999999884211 0 11224
Q ss_pred ceeEEccceEEEecC---CCCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 162 FGEIHLKVSSVRASK---SDDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 162 ~G~I~L~~~si~~s~---~d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
+|.+.|..-.|.... ...+.|.|..+. +++.+.|.|.+|+++||.+|+.+....++
T Consensus 71 kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~~~~ 130 (132)
T 1v61_A 71 QGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPS 130 (132)
T ss_dssp EEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTTSCS
T ss_pred EEEEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 588888877776431 234689998876 99999999999999999999999988763
No 81
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.24 E-value=0.0021 Score=61.11 Aligned_cols=88 Identities=15% Similarity=0.098 Sum_probs=63.7
Q ss_pred CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCcceeEEccceEEEe
Q 003938 95 GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKPFGEIHLKVSSVRA 174 (785)
Q Consensus 95 ~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~si~~ 174 (785)
.||=+.|+|.|=+++|.|-|.....+.. ..-..++.+.|.+-.+..
T Consensus 30 ~kg~qqR~~FLFND~LL~TK~~~kkk~~----------------------------------~~Y~vr~~~~L~gm~V~~ 75 (140)
T 3qwm_A 30 KLGLHQREIFLFNDLLVVTKIFQKKKNS----------------------------------VTYSFRQSFSLYGMQVLL 75 (140)
T ss_dssp CTTTTEEEEEEESSCEEEEECCC---CC----------------------------------CCCCCEEEECCTTEEEEE
T ss_pred cccccceEEEEecchhhheeecccCCCC----------------------------------CceEEEEEeeecceEEEc
Confidence 3667999999999999999853321100 112355777777777765
Q ss_pred cCCC--CCceEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 175 SKSD--DKRLTIFTG------TKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 175 s~~d--~~~F~I~t~------~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.... ...|.|... .+++.|.|.|.+||.+||++|+.+++...
T Consensus 76 ~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 76 FENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp ECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 5443 456777764 27899999999999999999999988754
No 82
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.21 E-value=0.0029 Score=68.99 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=75.2
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
....+|.|..++..+ .++.|||.|-+++|.|.+.++. +...... + .+...+ ......
T Consensus 258 ~li~eG~l~~~~~~~-~~~~~~~fLF~d~Ll~~k~k~~-k~~~k~~--------~----------~~~~~~---~~~k~~ 314 (377)
T 3p6a_A 258 KLVHEGPLTWRVTKD-KAVEVHVLLLDDLLLLLQRQDE-RLLLKSH--------S----------RTLTPT---PDGKTM 314 (377)
T ss_dssp CEEEEEEEEEESSSS-CEEEEEEEEESSEEEEEEEETT-EEECCCC--------C----------CC------------C
T ss_pred eEEEECCcEEEecCC-CeEEEEEEeeCCEEEEEEEcCc-eeEEeec--------c----------cccccC---ccccCC
Confidence 357899997766543 7999999999999999996532 1110000 0 000000 001111
Q ss_pred cceeEEccceEEEecCCCCCceEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 161 PFGEIHLKVSSVRASKSDDKRLTIFT----GTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~d~~~F~I~t----~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
..+.|.|....+.+...+.+.|.++. +..+|.|.|.|.++++.||++|+.|++.+
T Consensus 315 ~~~~i~l~~~~v~e~~~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 315 LRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp SCSEEEGGGEEEEECTTCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEechhhhccccccccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 23578888888887767777777544 45799999999999999999999999865
No 83
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.19 E-value=0.002 Score=71.24 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=73.1
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.-.++|.|.+.....+.++.|+|.|-++.|.|-|..... .+ .-.
T Consensus 256 ~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~---------~~---------------------------~~~ 299 (402)
T 2dfk_A 256 ELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIR---------RD---------------------------ILY 299 (402)
T ss_dssp CEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSC---------TT---------------------------CEE
T ss_pred ceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEecccc---------CC---------------------------ceE
Confidence 357899999887533458999999999999999863210 00 011
Q ss_pred cceeEEccceEEEecCCC---------CCceEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 161 PFGEIHLKVSSVRASKSD---------DKRLTIFTG--TKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~d---------~~~F~I~t~--~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.++.|.|....|...... .+.|.|... .++|.|+|.|.++++.||++|+.++....
T Consensus 300 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~ 366 (402)
T 2dfk_A 300 YKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQ 366 (402)
T ss_dssp EEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 457788877776643221 256888764 57999999999999999999999987754
No 84
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.19 E-value=0.0019 Score=72.63 Aligned_cols=99 Identities=16% Similarity=0.171 Sum_probs=73.1
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
..++|.|.+.....+.++.|+|.|-++.|.|-|...... .....
T Consensus 334 li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~------------------------------------~~~~~ 377 (466)
T 2pz1_A 334 LIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRR------------------------------------DVLYY 377 (466)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCT------------------------------------TCEEE
T ss_pred eEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccC------------------------------------CceEE
Confidence 478999998875445689999999999999998632100 00114
Q ss_pred ceeEEccceEEEecCCC---------CCceEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 162 FGEIHLKVSSVRASKSD---------DKRLTIFTG--TKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d---------~~~F~I~t~--~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
++.|.|....|...... .+.|.|... .++|.|+|.|.++++.||++|+.++....
T Consensus 378 k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~ 443 (466)
T 2pz1_A 378 KGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQ 443 (466)
T ss_dssp EEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 57788887777643221 246888764 57999999999999999999999988754
No 85
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=97.15 E-value=0.0022 Score=70.87 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=71.8
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
..++|.|.++....+.++.|++.|-++.|.|-|.++. +. ..
T Consensus 234 li~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~-~y--------------------------------------~~ 274 (406)
T 2vrw_B 234 PKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGD-SY--------------------------------------DL 274 (406)
T ss_dssp EEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETT-EE--------------------------------------EE
T ss_pred ccccccEEEEecCCCccceEEEEecCCEEEEEEecCC-ce--------------------------------------EE
Confidence 4689999988655577899999999999999986431 10 13
Q ss_pred ceeEEccceEEEecCCC-------CCceEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 162 FGEIHLKVSSVRASKSD-------DKRLTIFT--GTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d-------~~~F~I~t--~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
++.|.|....|...... ...|.|.. +.+.|.|.|.|.++++.||++|+.|+....
T Consensus 275 k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 275 KASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp EEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 46777777666543222 25788875 578999999999999999999999987643
No 86
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.13 E-value=0.0025 Score=59.78 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=31.4
Q ss_pred CCCceEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 178 DDKRLTIFTGT--KTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 178 d~~~F~I~t~~--Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.++.|+|+.++ ++++|-|+|.++++.|+.+|+.......
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~~ 124 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHSG 124 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC---
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 35679987765 7999999999999999999999876543
No 87
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=97.10 E-value=0.002 Score=74.85 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=73.2
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
..++|.|.++....+.++.|||.|-++.|.|-|..+. +. ..
T Consensus 406 ll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~-~y--------------------------------------~~ 446 (587)
T 3ky9_A 406 PKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGD-SY--------------------------------------DL 446 (587)
T ss_dssp EEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETT-EE--------------------------------------EE
T ss_pred eEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCC-EE--------------------------------------Ee
Confidence 4689999998877788999999999999999986421 11 14
Q ss_pred ceeEEccceEEEecCCC-------CCceEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 162 FGEIHLKVSSVRASKSD-------DKRLTIFTGT--KTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d-------~~~F~I~t~~--Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
++.|.|....|...... .+.|.|.... ++|.|.|.|.++++.||++|+.|+....
T Consensus 447 k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 447 KDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred eeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 57788888777654321 2568887754 8999999999999999999999987643
No 88
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.07 E-value=0.0048 Score=67.01 Aligned_cols=104 Identities=14% Similarity=0.271 Sum_probs=72.7
Q ss_pred cceEEEEEeecCCCC-----------CceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccc
Q 003938 82 ASVAGILYKWVNYGK-----------GWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSH 150 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K-----------~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~ 150 (785)
..++|.|.+|.+..+ .++.|+|.|-++.|.|-|...... + |.+
T Consensus 210 ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~--------~-----~~~------------- 263 (353)
T 1kz7_A 210 LLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENG--------E-----GYE------------- 263 (353)
T ss_dssp EEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCC--------S-----SCC-------------
T ss_pred hheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccc--------c-----CCC-------------
Confidence 478999998753222 378999999999999998643200 0 000
Q ss_pred cccccccCCCcceeEEccceEEEec-CCCCCceEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 151 RLGFAARQCKPFGEIHLKVSSVRAS-KSDDKRLTIFT--GTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 151 ~~~~~~~~~~p~G~I~L~~~si~~s-~~d~~~F~I~t--~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
....-.-++.|.|....+... ..+.+.|.|.. +.++|.|+|.|.++++.|+++|+.|+...
T Consensus 264 ----~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 264 ----KAPSYSYKQSLNMTAVGITENVKGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp ----CSCEEEEEEEEEGGGEEEECCBTTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCeEEEEEEeEcccceeeEcCCCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 000011346778877777654 34678899876 46899999999999999999999997653
No 89
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.06 E-value=0.0023 Score=69.28 Aligned_cols=101 Identities=14% Similarity=0.199 Sum_probs=73.0
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.-.++|.|.++| .++.|+|.|-++.|.|-|...... . +.|. ....-.
T Consensus 246 ~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~-~----------~~~~------------------~~~~y~ 292 (354)
T 1dbh_A 246 EFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQP-R----------LPGA------------------SNAEYR 292 (354)
T ss_dssp CEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCC-C----------CTTS------------------CCCSEE
T ss_pred eEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCC-C----------CCCC------------------CCccee
Confidence 347899999984 589999999999999999643100 0 0000 001112
Q ss_pred cceeEEccceEEEecCC---CCCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 161 PFGEIHLKVSSVRASKS---DDKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~---d~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.++.|.|....|..... ..+.|.|.... ++|.|+|.|.++++.|+++|+.++..
T Consensus 293 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 293 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp EEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 45888998888775422 24789998774 89999999999999999999999764
No 90
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.03 E-value=0.0042 Score=71.50 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=75.3
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
..+++|.|.+.+... .++.|||+|-+++|.|.+.+.. +..+.. . + .+...+ ......
T Consensus 411 ~LI~eG~l~~~~~~~-k~~~r~~fLF~D~LL~~k~k~~-ky~~k~-----~---~----------~~~~~~---~d~k~~ 467 (536)
T 3odw_A 411 KLVHEGPLTWRVTKD-KAVEVHVLLLDDLLLLLQRQDE-RLLLKS-----H---S----------RTLTPT---PDGKTM 467 (536)
T ss_dssp CEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETT-EEECCC-----C----------------------------C
T ss_pred eeeeecceEEEecCC-CeeEEEEEEcCCEEEEEEEcCC-eEEEee-----c---c----------cccccc---cccccc
Confidence 357899998877543 6899999999999999996542 111000 0 0 000000 001112
Q ss_pred cceeEEccceEEEecCCCCCceEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 161 PFGEIHLKVSSVRASKSDDKRLTIFT----GTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~d~~~F~I~t----~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
..+.|.|....+.....+.+.|.++. +.++|.|.|.|.+|++.||++|+.|+..+.
T Consensus 468 ~~~~i~L~~l~v~e~~~d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 468 LRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp CCSEEEGGGEEEEECTTCTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred cCceeecccceeecccccCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 34678898888887777778777654 458999999999999999999999998753
No 91
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.00 E-value=0.0045 Score=67.85 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=73.4
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
..++|.|.+.... +.++.|++.|-++.|.|-|.++. +..+..- .+.+ .+. .......
T Consensus 257 li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~~~~-~~~~~~~----~~~~-------------~~~----~~~~~~~ 313 (385)
T 1txd_A 257 MIHEGPLVWKVNR-DKTIDLYTLLLEDILVLLQKQDD-RLVLRCH----SKIL-------------AST----ADSKHTF 313 (385)
T ss_dssp EEEEEEEEEESSS-SCBCCEEEEEESSEEEEEEEETT-EEECCC----------------------------------CC
T ss_pred EEEECcEEEEcCC-CCeEEEEEEecCCeeEEEEecCC-eeEEeec----cccc-------------ccc----CCCCcCC
Confidence 4789999866543 46899999999999999986432 1110000 0000 000 0011224
Q ss_pred ceeEEccceEEEecCCCCCceEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003938 162 FGEIHLKVSSVRASKSDDKRLTIFT----GTKTLHLRCISREDRTVWIDALQAAKDLFPR 217 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~d~~~F~I~t----~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~~ 217 (785)
++.|.|....+.....+.+.|.+++ +.++|.|+|.|.++++.||++|+.|+..+..
T Consensus 314 ~~~i~l~~~~v~~~~~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~ 373 (385)
T 1txd_A 314 SPVIKLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKE 373 (385)
T ss_dssp CSEEEGGGEEEEECCC-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceecccccccccccCCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccC
Confidence 6788998887776555556555433 3689999999999999999999999887653
No 92
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.97 E-value=0.0021 Score=60.16 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=68.1
Q ss_pred CCCcceEEEEEeecC--------CCCCceeeEEEEeC------CeEEEEeecCCCccccCcccCCCceeeccchhhhhhc
Q 003938 79 GVSASVAGILYKWVN--------YGKGWRSRWFVLED------GVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRK 144 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~--------~~K~Wk~RWFVL~~------g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~ 144 (785)
.+....+|.|.-... ....|+++|+||.. -.|-||...
T Consensus 15 ~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PP---------------------------- 66 (136)
T 1v5m_A 15 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPP---------------------------- 66 (136)
T ss_dssp SCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESST----------------------------
T ss_pred cceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCC----------------------------
Confidence 345678999965532 34679999999943 367788642
Q ss_pred cccccccccccccCCCcceeEEccceE-EEe-----cCCCCCceEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 145 ANWSSHRLGFAARQCKPFGEIHLKVSS-VRA-----SKSDDKRLTIFTGTK-TLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 145 ~~~~~~~~~~~~~~~~p~G~I~L~~~s-i~~-----s~~d~~~F~I~t~~R-t~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
+..+|+..|.+.... |+. -...++.|.|.+.++ .|.|.|.+..+++.|+..|+.+...
T Consensus 67 ------------kssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 67 ------------KASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp ------------TSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ------------cccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 223466667665332 332 234578899988776 8999999999999999999988654
No 93
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.75 E-value=0.0082 Score=63.84 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=71.7
Q ss_pred cceEEEEEeecC--CCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 82 ASVAGILYKWVN--YGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 82 ~~~~G~L~K~g~--~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
....|.+..+.+ ..+..+.|+|.|-++.|.|-|...... + ...-
T Consensus 203 li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~--------~--------------------------~~~y 248 (311)
T 1nty_A 203 LILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSS--------G--------------------------RSKY 248 (311)
T ss_dssp EEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTT--------C--------------------------CEEE
T ss_pred ceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCC--------C--------------------------Ccee
Confidence 356788877743 245689999999999999998642100 0 0001
Q ss_pred CcceeEEccceEEEec-CCCCCceEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSSVRAS-KSDDKRLTIFT-----GTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s-~~d~~~F~I~t-----~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..++.|.|....+... ..+++.|.|.. +.++|.|+|.|.++++.|+++|+.|+..
T Consensus 249 ~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 249 LYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp EEEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 1457788887777654 34567899876 3578999999999999999999999865
No 94
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=96.28 E-value=0.0023 Score=48.09 Aligned_cols=22 Identities=23% Similarity=0.637 Sum_probs=19.0
Q ss_pred CCCCCCCCCccccccccccCcc
Q 003938 340 ADVETDEDDGIFFDTNDFLSSE 361 (785)
Q Consensus 340 ~~~~~~~~~~~f~da~~~~~~~ 361 (785)
++.+++|||+|||||.+|++++
T Consensus 10 Ge~SdEDed~EfFDA~efITv~ 31 (47)
T 2rr3_B 10 GDMSDEDDENEFFDAPEIITMP 31 (47)
T ss_dssp CCSCCCCCSSCCBCCCSSCSSC
T ss_pred ccccccccccccccccceeEcc
Confidence 5677778889999999999986
No 95
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.27 E-value=0.031 Score=60.65 Aligned_cols=102 Identities=12% Similarity=0.136 Sum_probs=69.7
Q ss_pred cceEEEEEeecCC-----CCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccc
Q 003938 82 ASVAGILYKWVNY-----GKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAA 156 (785)
Q Consensus 82 ~~~~G~L~K~g~~-----~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~ 156 (785)
....|-+..+.+. .+.++.|+|.|-+++|.|-|...... . |. ..
T Consensus 207 Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-~------------~~------------------~~ 255 (354)
T 2rgn_B 207 LLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGV-R------------GG------------------TQ 255 (354)
T ss_dssp EEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC---------------------------------------
T ss_pred ccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCC-C------------CC------------------CC
Confidence 3556777655321 24689999999999999998643200 0 00 00
Q ss_pred cCCCcceeEEccceEEEec-CCCCCceEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 157 RQCKPFGEIHLKVSSVRAS-KSDDKRLTIFT-----GTKTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 157 ~~~~p~G~I~L~~~si~~s-~~d~~~F~I~t-----~~Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.....++.|.|....+... ..+.+.|.|.. +..+|.|+|.|.++++.||++|+.|+..
T Consensus 256 ~~y~~k~~i~l~~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 256 PGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp CCEEEEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CceEEcceeeccceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 0112457788887777654 35678899865 2479999999999999999999999765
No 96
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=96.08 E-value=0.023 Score=61.16 Aligned_cols=92 Identities=15% Similarity=0.122 Sum_probs=62.3
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
-..+|.|.+.. + +.|++.|-++.|.|-|.....+-. ..+ .-
T Consensus 232 li~~G~l~~~~----~-~~~~~fLF~d~Ll~~k~~~~~~~~-------~~~---------------------------v~ 272 (346)
T 2z0q_A 232 LCCHGELKNNR----G-VKLHVFLFQEVLVITRAVTHNEQL-------CYQ---------------------------LY 272 (346)
T ss_dssp EEEEEEEEETT----S-CEEEEEEESSEEEEEEEEEETTEE-------EEE---------------------------ES
T ss_pred EEEeceeEECC----C-cEEEEEECCCcEEEEEEeccCCce-------eee---------------------------ee
Confidence 36789998632 2 899999999999999853210000 000 02
Q ss_pred ceeEEccceEEEecCC------------------CCCceEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003938 162 FGEIHLKVSSVRASKS------------------DDKRLTIFT----GTKTLHLRCISREDRTVWIDALQAAK 212 (785)
Q Consensus 162 ~G~I~L~~~si~~s~~------------------d~~~F~I~t----~~Rt~~L~A~S~edr~~WI~AL~~a~ 212 (785)
++.|.|....+..... ..+.|.|.. +.++|.|.|.|.++++.||++|+.|+
T Consensus 273 k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 273 RQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp SCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 3456666655554322 135688864 36899999999999999999999986
No 97
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=95.96 E-value=0.0012 Score=74.77 Aligned_cols=106 Identities=23% Similarity=0.221 Sum_probs=0.0
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccc--cccCC
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGF--AARQC 159 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~--~~~~~ 159 (785)
...+|.|.|. ++++.|||.|-++.|.|.+........ .|.+ ..+. .....
T Consensus 253 li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~-----------~g~~-------------~~f~~~~~~~~ 304 (510)
T 3jzy_A 253 LLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVS-----------SGSE-------------KLFSSKSNAQF 304 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeceEEEc----CCCcEEEEEcccceeEEeeeccccccc-----------CCcc-------------cccCcccccce
Confidence 3466777664 568999999999999998853321000 0000 0000 00000
Q ss_pred C-cceeEEccceEEEec---CCCCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 160 K-PFGEIHLKVSSVRAS---KSDDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 160 ~-p~G~I~L~~~si~~s---~~d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
+ -++.|.|....+... ....+.|.|..+.++|.|+|.|.+++..||++|+.|+..+
T Consensus 305 ~v~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 305 KMYKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp ------------------------------------------------------------
T ss_pred eEEcCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 1 135566665555432 2345789999999999999999999999999999997754
No 98
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=94.66 E-value=0.3 Score=53.03 Aligned_cols=57 Identities=23% Similarity=0.212 Sum_probs=43.4
Q ss_pred CcceeEEccceEEEecCCCC----CceEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003938 160 KPFGEIHLKVSSVRASKSDD----KRLTIF--------TGTKTLHLRCISREDRTVWIDALQAAKDLFP 216 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s~~d~----~~F~I~--------t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~ 216 (785)
.-++.|.|....|......+ ..|.|. .+.++|.|+|.|.++++.||.+|+.+.....
T Consensus 301 ~~k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~ 369 (377)
T 1foe_A 301 RFRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKH 369 (377)
T ss_dssp CCEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred eEeeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHh
Confidence 35688999888887543222 236665 3468999999999999999999999987643
No 99
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=94.33 E-value=0.33 Score=57.37 Aligned_cols=99 Identities=21% Similarity=0.278 Sum_probs=60.7
Q ss_pred CCCcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhcccccccccccccc
Q 003938 79 GVSASVAGILYKWVNYG-KGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAAR 157 (785)
Q Consensus 79 ~~~~~~~G~L~K~g~~~-K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~ 157 (785)
+....+.|++.|+++.+ ..||+|+|.|..+.|........
T Consensus 556 ~~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~~--------------------------------------- 596 (689)
T 3v5w_A 556 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEA--------------------------------------- 596 (689)
T ss_dssp SSCCCEEEEEEEC-------CEEEEEEEETTEEEEECTTSC---------------------------------------
T ss_pred CCcceeecccccCCCcccchhhhhccccCCCcccccccCCC---------------------------------------
Confidence 55678999999999866 57999999999988877642110
Q ss_pred CCCcceeEEccceEEEec--CCCCCceEEE-eCCeEEEEEcCCHHHHHHHHHHHHHHHHHccccc
Q 003938 158 QCKPFGEIHLKVSSVRAS--KSDDKRLTIF-TGTKTLHLRCISREDRTVWIDALQAAKDLFPRLL 219 (785)
Q Consensus 158 ~~~p~G~I~L~~~si~~s--~~d~~~F~I~-t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~~~~~ 219 (785)
+...+.+.....+.. ......|.+. .+.|+|.+.+.|..++..|+.+|+.+-....+++
T Consensus 597 ---~~~l~~~~~v~~v~k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~~~~~l 658 (689)
T 3v5w_A 597 ---PQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYREAQQLV 658 (689)
T ss_dssp ---CCEEEEGGGEEEEEEEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcceeeeccccccccCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHHHHHHH
Confidence 111122221111111 1222334444 4679999999999999999999998865544433
No 100
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=94.15 E-value=0.11 Score=64.30 Aligned_cols=100 Identities=15% Similarity=0.245 Sum_probs=69.3
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCC
Q 003938 81 SASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCK 160 (785)
Q Consensus 81 ~~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (785)
.-.++|.|.|.+. + +.|||.|-++.|.|-|.....+ ++.|. ....-.
T Consensus 443 ~Li~eG~l~~~~~---k-~~r~~FLF~D~Ll~~K~~~~~~-----------~~~g~------------------~~~~y~ 489 (1049)
T 3ksy_A 443 EFIMEGTLTRVGA---K-HERHIFLFDGLMICCKSNHGQP-----------RLPGA------------------SNAEYR 489 (1049)
T ss_dssp CCCCEEEEEETTC---S-SCEEEEEETTEEEEEECCTTCC-----------CCTTS------------------CCCSCC
T ss_pred eEEEeceEEEEcc---C-ceEEEEeeCCeEEEEEecCccC-----------CCCCC------------------CCCceE
Confidence 3568999998773 2 8999999999999999643210 00000 001123
Q ss_pred cceeEEccceEEEecCCC---CCceEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 161 PFGEIHLKVSSVRASKSD---DKRLTIFTGT-KTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 161 p~G~I~L~~~si~~s~~d---~~~F~I~t~~-Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
.++.|.|....|...... .+.|.|.... .+|.|+|.|.++++.||++|+.++.
T Consensus 490 ~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 490 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp CCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 567788777766543222 3568887654 5999999999999999999998864
No 101
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=85.90 E-value=1.1 Score=41.18 Aligned_cols=98 Identities=11% Similarity=0.156 Sum_probs=70.8
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCCCc
Q 003938 82 ASVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQCKP 161 (785)
Q Consensus 82 ~~~~G~L~K~g~~~K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~~p 161 (785)
..+.|++.-|.+. +.=+.|+..|-+..|.+.|.... . ....-.-
T Consensus 10 Ll~q~~f~V~~~~-~k~~eR~vFLFe~~ilf~K~~~~---~--------------------------------~~~~Y~~ 53 (119)
T 1fho_A 10 IIRHDAFQVWEGD-EPPKLRYVFLFRNKIMFTEQDAS---T--------------------------------SPPSYTH 53 (119)
T ss_dssp SSEEEEEEECSTT-CSCEEEEEEEETTEEEEEEECCS---S--------------------------------SSCCCSS
T ss_pred ccccCceEEEeCC-CCcceEEEEEecCcEEEEEEecC---C--------------------------------CCCcEEE
Confidence 4789999999764 33567888899999999996511 0 0011124
Q ss_pred ceeEEccceEEEecC--CCCCceEEEeCC--eEEEE--EcCCHH-HHHHHHHHHHHHHHHc
Q 003938 162 FGEIHLKVSSVRASK--SDDKRLTIFTGT--KTLHL--RCISRE-DRTVWIDALQAAKDLF 215 (785)
Q Consensus 162 ~G~I~L~~~si~~s~--~d~~~F~I~t~~--Rt~~L--~A~S~e-dr~~WI~AL~~a~~~~ 215 (785)
+..|.|....+.+.. .|+++|.|..+. ..|.+ +|.|.+ .++.||+.|+.+++.+
T Consensus 54 K~~ikl~~~~lte~~~~~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~ 114 (119)
T 1fho_A 54 YSSIRLDKYNIRQHTTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKY 114 (119)
T ss_dssp CCEEESSSCEEEEECTTCCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHH
T ss_pred eeEEeeceeEEEecCCCCCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 567888888888764 456789986654 56778 999999 9999999999866554
No 102
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=82.38 E-value=3.6 Score=42.90 Aligned_cols=51 Identities=22% Similarity=0.350 Sum_probs=41.0
Q ss_pred ceeEEccceEEEec----CCCCCceEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHH
Q 003938 162 FGEIHLKVSSVRAS----KSDDKRLTIFTG--TKTLHLRCISREDRTVWIDALQAAK 212 (785)
Q Consensus 162 ~G~I~L~~~si~~s----~~d~~~F~I~t~--~Rt~~L~A~S~edr~~WI~AL~~a~ 212 (785)
.+.|.|+.|-+... +...+.|.|+.+ ..++.|+|++.++..+|++||++++
T Consensus 205 ~~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp CEEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 47788888876543 234567888875 5789999999999999999999986
No 103
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=82.13 E-value=5.9 Score=47.41 Aligned_cols=90 Identities=22% Similarity=0.314 Sum_probs=56.5
Q ss_pred cceEEEEEeec-CCC-CCceeeEEEEeCCeEEEEeecCCCccccCcccCCCceeeccchhhhhhccccccccccccccCC
Q 003938 82 ASVAGILYKWV-NYG-KGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDNNVRVIGEDSIRFMRKANWSSHRLGFAARQC 159 (785)
Q Consensus 82 ~~~~G~L~K~g-~~~-K~Wk~RWFVL~~g~L~YYk~~~~~~~~~~~~~~~~~r~ig~~~~~~~~~~~~~~~~~~~~~~~~ 159 (785)
++..|||.... +.. .|=|.-||||.-..|++||+.....
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 580 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKE--------------------------------------- 580 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCC---------------------------------------
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhhc---------------------------------------
Confidence 67789999854 333 4688999999999999999843210
Q ss_pred CcceeEEccceEEEec----CCCCCceEEEeC--------CeEEEEEcCCHHHHHHHHHHHHHH
Q 003938 160 KPFGEIHLKVSSVRAS----KSDDKRLTIFTG--------TKTLHLRCISREDRTVWIDALQAA 211 (785)
Q Consensus 160 ~p~G~I~L~~~si~~s----~~d~~~F~I~t~--------~Rt~~L~A~S~edr~~WI~AL~~a 211 (785)
-+-.+.|....++.. -+....|.|+.+ -|++-|.|+|.++...|...+-.|
T Consensus 581 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 581 -KKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp -EEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred -ccccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhhhhc
Confidence 001112222222211 122345666654 268999999999999999887554
No 104
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=80.90 E-value=5.3 Score=48.10 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=29.5
Q ss_pred CCCceEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003938 178 DDKRLTIFTGT-----KTLHLRCISREDRTVWIDALQAAKD 213 (785)
Q Consensus 178 d~~~F~I~t~~-----Rt~~L~A~S~edr~~WI~AL~~a~~ 213 (785)
.++.|+|+.+. ++++|-|.+.++.+.|+..|+....
T Consensus 102 e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 102 QDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp HHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 34678887764 4669999999999999999998754
No 105
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=79.07 E-value=4.4 Score=39.90 Aligned_cols=51 Identities=22% Similarity=0.350 Sum_probs=41.7
Q ss_pred ceeEEccceEEEec----CCCCCceEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHH
Q 003938 162 FGEIHLKVSSVRAS----KSDDKRLTIFTG--TKTLHLRCISREDRTVWIDALQAAK 212 (785)
Q Consensus 162 ~G~I~L~~~si~~s----~~d~~~F~I~t~--~Rt~~L~A~S~edr~~WI~AL~~a~ 212 (785)
...|.|+-|-|.-. +...+-|.|+.+ ..|..|+|.+..+.++|++||++.+
T Consensus 120 ~~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 120 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp CEEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred ceeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 36788998887643 335567999885 4799999999999999999999875
No 106
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=68.35 E-value=18 Score=43.84 Aligned_cols=38 Identities=18% Similarity=0.354 Sum_probs=31.3
Q ss_pred CCCCceEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 177 SDDKRLTIFTGT-----KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 177 ~d~~~F~I~t~~-----Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
..++.|+|+.+. ++++|.|.+.++.+.|+..|+.....
T Consensus 98 ~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 98 LEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp -CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred ccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 457889987764 47999999999999999999987553
No 107
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=59.87 E-value=34 Score=41.05 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=30.6
Q ss_pred CCCceEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003938 178 DDKRLTIFTGT-----KTLHLRCISREDRTVWIDALQAAKDL 214 (785)
Q Consensus 178 d~~~F~I~t~~-----Rt~~L~A~S~edr~~WI~AL~~a~~~ 214 (785)
.++.|+|+.+. ++++|.|.|.++++.|+..|+.....
T Consensus 95 e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~ 136 (799)
T 2zkm_X 95 LLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKH 136 (799)
T ss_dssp GGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred ccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 35678887764 47999999999999999999987664
No 108
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=46.33 E-value=32 Score=25.38 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 003938 266 QNQLNALQRKHIMLLGTLRQLETEKMELEATV 297 (785)
Q Consensus 266 ~~~l~~l~~~~~~ll~~l~~Le~ek~~le~t~ 297 (785)
+.+|+.|....-..+|..|.||.++..||.-+
T Consensus 5 Ke~mq~LNdrlAsyidkVR~LE~~N~~Le~~i 36 (39)
T 1gk7_A 5 KVELQELNDRFANYIDKVRFLEQQNKILLAEL 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788899988899999999999998887655
No 109
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=39.77 E-value=67 Score=26.88 Aligned_cols=42 Identities=26% Similarity=0.472 Sum_probs=36.8
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 003938 256 SIMLSEHSDLQNQLNALQRKHIMLLGTLRQLETEKMELEATV 297 (785)
Q Consensus 256 ~i~~~e~s~l~~~l~~l~~~~~~ll~~l~~Le~ek~~le~t~ 297 (785)
....+|+.++..++.+|+..+..+++.|-.||.+-..||..+
T Consensus 17 nma~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l 58 (72)
T 2xu6_A 17 NSTMSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNL 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 667789999999999999999999999988888777777664
No 110
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=39.11 E-value=2.2e+02 Score=26.18 Aligned_cols=53 Identities=21% Similarity=0.303 Sum_probs=38.9
Q ss_pred eeEEccceE-EEecCCCCCceEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 163 GEIHLKVSS-VRASKSDDKRLTIFT------GTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 163 G~I~L~~~s-i~~s~~d~~~F~I~t------~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
-++|+.... +..+...++.|.|+- ..|+|.|-|.|.++..+=|..|+...+.+
T Consensus 57 tS~H~s~Vv~~K~s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 57 KSLHISQVVLVKKSKRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp EEEEGGGEEEEEECSSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeEEEEEecccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 456664322 334556677787643 24999999999999999999999988765
No 111
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=31.95 E-value=3.3e+02 Score=26.41 Aligned_cols=37 Identities=19% Similarity=0.132 Sum_probs=31.5
Q ss_pred CCCceEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003938 178 DDKRLTIFTGTKTLHLRCISREDRTVWIDALQAAKDLF 215 (785)
Q Consensus 178 d~~~F~I~t~~Rt~~L~A~S~edr~~WI~AL~~a~~~~ 215 (785)
.+..|.|.- +|+|+..|++.+||..+|..|-..-..+
T Consensus 114 ~~~gF~ltl-~K~Y~W~a~s~~Er~~FI~sL~K~y~ky 150 (171)
T 3hie_A 114 ISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQT 150 (171)
T ss_dssp CTTEEEEES-SSEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEe-CCeEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 466788777 5999999999999999999998876654
No 112
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=26.05 E-value=1.5e+02 Score=24.81 Aligned_cols=28 Identities=25% Similarity=0.200 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 003938 271 ALQRKHIMLLGTLRQLETEKMELEATVV 298 (785)
Q Consensus 271 ~l~~~~~~ll~~l~~Le~ek~~le~t~~ 298 (785)
.|++++..|.+.+.+||.|+.-|-...-
T Consensus 19 vLKe~I~EL~e~~~qLE~EN~~Lk~~as 46 (78)
T 1dip_A 19 ILKEQIRELVEKNSQLERENTLLKTLAS 46 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3456666688888889988776655553
No 113
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=24.16 E-value=2.1e+02 Score=24.29 Aligned_cols=56 Identities=21% Similarity=0.343 Sum_probs=26.1
Q ss_pred cchHHHHHHHhhcccchhhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 003938 232 VSTERLRLRLLQEGVGDSVIKDCESIMLSEHSDLQNQLNALQRKHIMLLGTLRQLETEKMELEATV 297 (785)
Q Consensus 232 ~s~e~lr~rL~e~~~~e~~ik~~e~i~~~e~s~l~~~l~~l~~~~~~ll~~l~~Le~ek~~le~t~ 297 (785)
...++||.||.+. -...-.|+..|..-=..|+.-...|-+.|..|+.|+.+++..+
T Consensus 7 AVeDKLRrrl~E~----------~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni 62 (78)
T 3iv1_A 7 AVSDKLRWRMKEE----------MDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNI 62 (78)
T ss_dssp HHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----------HHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788887654 1222234433332222223333334444455565665555443
No 114
>3sbu_A Hypothetical NTF2-like protein; cystatin-like, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; HET: MLY; 2.15A {Bacteroides fragilis}
Probab=22.30 E-value=58 Score=33.49 Aligned_cols=40 Identities=18% Similarity=0.251 Sum_probs=31.3
Q ss_pred eeeeeeeeeeeceee-EeecceE-EEEc-CCCceEEEEEeecC
Q 003938 566 KVTTSIYNIILGKIY-CDHYGTM-RIRG-SGNYSCKLKFKEQS 605 (785)
Q Consensus 566 ~p~~~i~nii~G~~~-~e~~G~~-~I~~-~tg~~~~l~F~~~~ 605 (785)
.|.-.|+||+.|+.| .+-..++ .|++ .+|+..+|.|+..|
T Consensus 206 lP~~~i~NI~YGQky~~~s~~KIl~~rGi~NG~e~~l~Fkk~~ 248 (261)
T 3sbu_A 206 LPADXLSNINYGQQNDDNASHKILALXGIGNGFSNILYFQRXD 248 (261)
T ss_dssp CCSSEEEEEESSCCCCTTCSEEEEEEEESSSCCEEEEEEEEET
T ss_pred cCcccceeeeccccccCCCCceEEEEEeecCceeEEEEEeecC
Confidence 588999999999999 4444444 4567 78999999998753
No 115
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=22.29 E-value=2.4e+02 Score=22.56 Aligned_cols=48 Identities=21% Similarity=0.244 Sum_probs=38.4
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 003938 250 VIKDCESIMLSEHSDLQNQLNALQRKHIMLLGTLRQLETEKMELEATV 297 (785)
Q Consensus 250 ~ik~~e~i~~~e~s~l~~~l~~l~~~~~~ll~~l~~Le~ek~~le~t~ 297 (785)
.+..|.+.-...+..|+.++..+..+-..|-..+..|..++..|...+
T Consensus 13 AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l 60 (63)
T 2wt7_A 13 AAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFIL 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456688888788888888888888888888888888888877775554
No 116
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=21.45 E-value=2e+02 Score=29.44 Aligned_cols=42 Identities=29% Similarity=0.475 Sum_probs=37.1
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 003938 256 SIMLSEHSDLQNQLNALQRKHIMLLGTLRQLETEKMELEATV 297 (785)
Q Consensus 256 ~i~~~e~s~l~~~l~~l~~~~~~ll~~l~~Le~ek~~le~t~ 297 (785)
.+..+|+.++-.+|..|+..+..+++.|..||.+-..||..+
T Consensus 173 ~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL 214 (242)
T 3uux_B 173 NSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNL 214 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 777889999999999999999999999999988777776554
No 117
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=20.33 E-value=2.9e+02 Score=21.78 Aligned_cols=48 Identities=13% Similarity=0.060 Sum_probs=36.7
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 003938 250 VIKDCESIMLSEHSDLQNQLNALQRKHIMLLGTLRQLETEKMELEATV 297 (785)
Q Consensus 250 ~ik~~e~i~~~e~s~l~~~l~~l~~~~~~ll~~l~~Le~ek~~le~t~ 297 (785)
.+..|.+.-......|+.++..+..+-..|-..+.+|+.|...|...+
T Consensus 12 AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 12 AASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355677777778888888888888888888888888887776664433
Done!