Your job contains 1 sequence.
>003942
MAEEEVLAPASAAAADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGS
EVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHSS
VEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVP
QQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD
ADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEI
KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ
EMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQ
NPHYPHLPYGNYPPQQMAPRSNYGGPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIP
GHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHP
YGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQV
PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPN
YPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGSA
YAAPTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMY
AAPR
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003942
(784 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2140513 - symbol:AT4G10070 "AT4G10070" species... 839 5.7e-123 3
TAIR|locus:2012713 - symbol:AT1G33680 "AT1G33680" species... 858 2.4e-104 3
TAIR|locus:2043530 - symbol:AT2G25970 "AT2G25970" species... 650 9.7e-64 1
RGD|621828 - symbol:Khsrp "KH-type splicing regulatory pr... 256 1.4e-26 3
UNIPROTKB|F6Y140 - symbol:KHSRP "Uncharacterized protein"... 254 3.4e-26 3
UNIPROTKB|E2QVT3 - symbol:KHSRP "Uncharacterized protein"... 254 8.7e-26 3
MGI|MGI:1336214 - symbol:Khsrp "KH-type splicing regulato... 256 8.1e-24 3
UNIPROTKB|F1MHR6 - symbol:LOC505564 "Uncharacterized prot... 254 1.0e-23 3
UNIPROTKB|Q92945 - symbol:KHSRP "Far upstream element-bin... 254 1.0e-23 3
ZFIN|ZDB-GENE-040426-2159 - symbol:fubp1 "far upstream el... 275 1.1e-23 2
UNIPROTKB|F1SBT6 - symbol:KHSRP "Uncharacterized protein"... 254 1.3e-23 3
MGI|MGI:1196294 - symbol:Fubp1 "far upstream element (FUS... 275 1.5e-23 2
UNIPROTKB|F1MX51 - symbol:FUBP1 "Uncharacterized protein"... 273 5.6e-23 2
UNIPROTKB|Q96AE4 - symbol:FUBP1 "Far upstream element-bin... 274 7.7e-23 2
UNIPROTKB|F1S9S5 - symbol:FUBP1 "Uncharacterized protein"... 273 7.8e-23 2
UNIPROTKB|E9PEB5 - symbol:FUBP1 "Far upstream element-bin... 274 8.3e-23 2
UNIPROTKB|B4DT31 - symbol:FUBP1 "cDNA FLJ53425, highly si... 274 8.9e-23 2
UNIPROTKB|E2RJQ2 - symbol:FUBP1 "Uncharacterized protein"... 273 9.2e-23 2
RGD|1591892 - symbol:Fubp1 "far upstream element (FUSE) b... 273 9.5e-23 2
UNIPROTKB|Q32PX7 - symbol:Fubp1 "Far upstream element-bin... 273 9.5e-23 2
UNIPROTKB|J9P014 - symbol:FUBP1 "Uncharacterized protein"... 273 9.9e-23 2
UNIPROTKB|F1NV59 - symbol:FUBP1 "Uncharacterized protein"... 251 2.4e-22 2
UNIPROTKB|F1S9S9 - symbol:FUBP1 "Uncharacterized protein"... 273 2.4e-22 2
ZFIN|ZDB-GENE-030131-4357 - symbol:khsrp "KH-type splicin... 251 3.6e-22 3
UNIPROTKB|E1BX03 - symbol:FUBP1 "Uncharacterized protein"... 262 2.0e-21 2
UNIPROTKB|Q8UVD9 - symbol:KHSRP "Far upstream element-bin... 243 9.8e-21 2
UNIPROTKB|Q96I24 - symbol:FUBP3 "Far upstream element-bin... 242 3.4e-20 2
UNIPROTKB|A6QP83 - symbol:FUBP3 "Uncharacterized protein"... 240 3.4e-20 3
UNIPROTKB|F1S0X8 - symbol:FUBP3 "Uncharacterized protein"... 237 8.1e-20 2
WB|WBGene00007534 - symbol:C12D8.1 species:6239 "Caenorha... 258 2.3e-19 2
UNIPROTKB|Q17936 - symbol:C12D8.1 "Protein C12D8.1, isofo... 258 2.3e-19 2
UNIPROTKB|G3V829 - symbol:Fubp3 "RCG45587" species:10116 ... 235 1.8e-18 2
RGD|1307004 - symbol:Fubp3 "far upstream element (FUSE) b... 235 1.8e-18 2
UNIPROTKB|F1NGC0 - symbol:FUBP3 "Uncharacterized protein"... 240 2.6e-18 2
UNIPROTKB|F1NYJ3 - symbol:FUBP3 "Uncharacterized protein"... 240 3.9e-18 2
UNIPROTKB|F1PEW1 - symbol:FUBP3 "Uncharacterized protein"... 244 1.6e-17 2
FB|FBgn0014870 - symbol:Psi "P-element somatic inhibitor"... 216 1.8e-17 2
UNIPROTKB|J9P1I9 - symbol:FUBP3 "Uncharacterized protein"... 237 9.4e-17 2
ZFIN|ZDB-GENE-041121-12 - symbol:zgc:101598 "zgc:101598" ... 231 1.5e-16 2
UNIPROTKB|Q7JPS0 - symbol:Psi "PSI" species:7242 "Drosoph... 216 1.5e-16 2
WB|WBGene00022738 - symbol:ZK418.9 species:6239 "Caenorha... 207 2.6e-16 2
UNIPROTKB|F1LMZ7 - symbol:Nova1 "RNA-binding protein Nova... 217 1.8e-15 2
WB|WBGene00013347 - symbol:Y59A8B.10 species:6239 "Caenor... 211 3.2e-15 2
UNIPROTKB|Q9GRY9 - symbol:Y59A8B.10 "Protein Y59A8B.10, i... 211 3.2e-15 2
UNIPROTKB|D3DS81 - symbol:NOVA1 "Neuro-oncological ventra... 215 3.4e-15 2
RGD|1308032 - symbol:Nova2 "neuro-oncological ventral ant... 225 3.8e-15 2
UNIPROTKB|F1MS84 - symbol:NOVA2 "Uncharacterized protein"... 221 4.4e-15 1
UNIPROTKB|F1NP95 - symbol:NOVA1 "Uncharacterized protein"... 216 4.9e-15 1
UNIPROTKB|Q9UNW9 - symbol:NOVA2 "RNA-binding protein Nova... 221 5.2e-15 1
UNIPROTKB|F1PUD6 - symbol:NOVA2 "Uncharacterized protein"... 221 5.5e-15 1
RGD|621345 - symbol:Nova1 "neuro-oncological ventral anti... 215 6.3e-15 2
UNIPROTKB|F1RM28 - symbol:NOVA2 "Uncharacterized protein"... 221 6.9e-15 1
ZFIN|ZDB-GENE-060526-113 - symbol:nova1 "neuro-oncologica... 211 6.7e-14 1
ZFIN|ZDB-GENE-080211-1 - symbol:nova2 "neuro-oncological ... 210 7.8e-14 1
WB|WBGene00016489 - symbol:C36E6.1 species:6239 "Caenorha... 196 1.0e-13 2
DICTYBASE|DDB_G0277909 - symbol:cbpP "calcium-binding pro... 164 2.3e-13 2
UNIPROTKB|C9JSZ1 - symbol:FUBP1 "Far upstream element-bin... 183 3.3e-13 1
UNIPROTKB|D4A6P8 - symbol:Fubp3 "Protein Fubp3" species:1... 185 5.3e-12 1
TAIR|locus:2084908 - symbol:FLK "AT3G04610" species:3702 ... 168 4.1e-11 2
TAIR|locus:2017612 - symbol:AT1G51580 "AT1G51580" species... 185 7.5e-11 1
FB|FBgn0085362 - symbol:Vml "Vitelline membrane-like" spe... 182 1.4e-10 1
FB|FBgn0262735 - symbol:Imp "IGF-II mRNA-binding protein"... 166 1.5e-10 2
FB|FBgn0261552 - symbol:ps "pasilla" species:7227 "Drosop... 182 1.5e-10 1
UNIPROTKB|G3N2N4 - symbol:NOVA1 "Uncharacterized protein"... 152 6.4e-10 2
UNIPROTKB|F1MBI6 - symbol:NOVA1 "Uncharacterized protein"... 143 6.6e-10 2
UNIPROTKB|F1NP94 - symbol:NOVA1 "Uncharacterized protein"... 152 8.1e-10 2
UNIPROTKB|B7Z770 - symbol:NOVA1 "RNA-binding protein Nova... 151 8.1e-10 2
UNIPROTKB|F1SGT5 - symbol:NOVA1 "Uncharacterized protein"... 152 8.3e-10 2
WB|WBGene00019692 - symbol:M01A10.1 species:6239 "Caenorh... 175 8.4e-10 1
UNIPROTKB|I3LRN5 - symbol:PCBP4 "Uncharacterized protein"... 124 8.8e-10 2
MGI|MGI:104297 - symbol:Nova1 "neuro-oncological ventral ... 152 1.5e-09 2
UNIPROTKB|D4AAF8 - symbol:Nova1 "RNA-binding protein Nova... 152 1.5e-09 2
UNIPROTKB|G3X7R5 - symbol:NOVA1 "Uncharacterized protein"... 152 1.5e-09 2
UNIPROTKB|J9NXS6 - symbol:NOVA1 "Uncharacterized protein"... 152 1.5e-09 2
UNIPROTKB|P51513 - symbol:NOVA1 "RNA-binding protein Nova... 151 1.9e-09 2
ZFIN|ZDB-GENE-030131-2317 - symbol:ewsr1a "Ewing sarcoma ... 172 2.0e-09 1
UNIPROTKB|F1NK13 - symbol:SS18 "Uncharacterized protein" ... 148 2.2e-09 2
ZFIN|ZDB-GENE-041221-2 - symbol:prnpb "prion protein b" s... 125 4.7e-09 2
ASPGD|ASPL0000051147 - symbol:rfeF species:162425 "Emeric... 125 6.4e-09 2
UNIPROTKB|Q0VCU0 - symbol:PCBP4 "Poly(rC)-binding protein... 122 6.7e-09 2
UNIPROTKB|E2RG64 - symbol:PCBP4 "Uncharacterized protein"... 122 6.7e-09 2
RGD|1307910 - symbol:Pcbp4 "poly(rC) binding protein 4" s... 122 6.7e-09 2
UNIPROTKB|B4DR34 - symbol:SS18 "Protein SSXT" species:960... 147 7.4e-09 2
TAIR|locus:2156141 - symbol:AT5G61910 "AT5G61910" species... 167 9.0e-09 1
MGI|MGI:1890471 - symbol:Pcbp4 "poly(rC) binding protein ... 122 1.1e-08 2
MGI|MGI:107708 - symbol:Ss18 "synovial sarcoma translocat... 148 1.1e-08 2
UNIPROTKB|H3BRU6 - symbol:PCBP2 "Poly(rC)-binding protein... 141 1.3e-08 2
UNIPROTKB|G8JLA5 - symbol:NOVA1 "RNA-binding protein Nova... 140 1.4e-08 1
UNIPROTKB|B4DLD3 - symbol:SS18 "cDNA FLJ58120, highly sim... 147 1.5e-08 2
ZFIN|ZDB-GENE-030131-1600 - symbol:ewsr1b "Ewing sarcoma ... 163 1.7e-08 1
UNIPROTKB|F8VRG9 - symbol:PCBP2 "Poly(rC)-binding protein... 112 1.8e-08 2
UNIPROTKB|Q15532 - symbol:SS18 "Protein SSXT" species:960... 147 1.8e-08 2
UNIPROTKB|G4N5A5 - symbol:MGG_16887 "Uncharacterized prot... 159 2.0e-08 1
UNIPROTKB|O73932 - symbol:igf2bp3-a "Insulin-like growth ... 162 2.3e-08 1
UNIPROTKB|F8VWQ4 - symbol:PCBP2 "Poly(rC)-binding protein... 112 2.4e-08 2
ZFIN|ZDB-GENE-040426-2122 - symbol:zgc:65870 "zgc:65870" ... 145 2.4e-08 2
FB|FBgn0038642 - symbol:Muc91C "Mucin 91C" species:7227 "... 155 4.9e-08 2
UNIPROTKB|D4ABC5 - symbol:Ss18 "Protein Ss18" species:101... 142 5.2e-08 2
WB|WBGene00002717 - symbol:let-526 species:6239 "Caenorha... 119 5.5e-08 2
MGI|MGI:1935147 - symbol:Arid1a "AT rich interactive doma... 155 6.4e-08 2
WARNING: Descriptions of 239 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2140513 [details] [associations]
symbol:AT4G10070 "AT4G10070" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 EMBL:CP002687 GO:GO:0003723
UniGene:At.33655 IPI:IPI01020077 RefSeq:NP_192745.2
ProteinModelPortal:F4JLJ3 SMR:F4JLJ3 EnsemblPlants:AT4G10070.1
GeneID:826598 KEGG:ath:AT4G10070 OMA:PSTHAIG ArrayExpress:F4JLJ3
Uniprot:F4JLJ3
Length = 725
Score = 839 (300.4 bits), Expect = 5.7e-123, Sum P(3) = 5.7e-123
Identities = 162/244 (66%), Positives = 195/244 (79%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
+R+I+VP++KVGVLIGK G+TIRYLQ+NSGAKIQI RD++ADP +A RPVEIIG+++ I+
Sbjct: 177 TRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSVACIE 236
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
AEKLI+AVIAEA+AGGSP+LVARG + A G EQ+EIKVPN+KVGLIIGRGGETIK
Sbjct: 237 SAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGGETIKN 296
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
+QTRSGAR QLIPQH EGDG KER VR++GD QI+IA +MIK+V++Q RPS+ SGG+
Sbjct: 297 MQTRSGARTQLIPQHA-EGDGLKERTVRISGDKMQIDIATDMIKDVMNQNARPSSYSGGY 355
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPR 440
NQ AYRP+ P GPPQWG RG H P YDY RGPY SQ +Y +G YPPQ M PR
Sbjct: 356 NQPAYRPQGPGGPPQWGSRGPHAPHP--YDYHPRGPYSSQGSYYNSPGFGGYPPQHMPPR 413
Query: 441 SNYG 444
YG
Sbjct: 414 GGYG 417
Score = 344 (126.2 bits), Expect = 5.7e-123, Sum P(3) = 5.7e-123
Identities = 103/267 (38%), Positives = 119/267 (44%)
Query: 500 NYNYGQPHTSEYXXXXXXXXXXXXXXXGHGYD----DNHAPVQHPYGGHSNSQPVYSQGG 555
+Y YGQ H EY G Y+ D++ P+Q PYGG S P GG
Sbjct: 465 SYGYGQSHGPEYGHAAPYSQTGYQQTYGQTYEQPKYDSNPPMQPPYGG---SYP--PAGG 519
Query: 556 LQSGYHQHQY-GKPPYGMPAQGTQPQSYX--XXXXXXXXXXXXYQSQVPSAQSYGPN--V 610
QSGY+Q Q G PYGM QG Q Y YQ P+A SYG
Sbjct: 520 GQSGYYQMQQPGVRPYGMQ-QGPVQQGYGPPQPAAAASSGDVPYQGATPAAPSYGSTNMA 578
Query: 611 PHQQQYPYATS-GPTQQ-TYPSYGSAPAPDSYN---QPPASAPGYPQQAGQ-AVPNYPQP 664
P QQQY Y +S GP QQ TYPSY SAP D+YN Q PA+ P Y QQ+ Q A Y Q
Sbjct: 579 PQQQQYGYTSSDGPVQQQTYPSYSSAPPSDAYNNGTQTPATGPAYQQQSVQPASSTYDQT 638
Query: 665 GGQQAPS--YG-QVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXX 721
G QQA + YG QVAPT GY Y +Q AY Q A S A G +
Sbjct: 639 GAQQAAAAGYGGQVAPTGGY-TYPTSQPAYGSQAAYSQAAPTQTGYEQQPATQAAVYATA 697
Query: 722 XXXTGQPGYAQPAATQPSYDQSASQST 748
T P + YD S +T
Sbjct: 698 PG-TAPVKTQSPQSAYAQYDASQVYAT 723
Score = 237 (88.5 bits), Expect = 1.0e-111, Sum P(3) = 1.0e-111
Identities = 87/273 (31%), Positives = 107/273 (39%)
Query: 528 HGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXX 587
+GY +H P YG ++ P YSQ G Q Y Q Y +P Y QP
Sbjct: 466 YGYGQSHGP---EYG---HAAP-YSQTGYQQTYGQ-TYEQPKYDSNPP-MQPPYGGSYPP 516
Query: 588 XXXXXXXXYQSQVPSAQSYGPNV-PHQQQY--PYATSGPTQQTYPSYGSAPAPDSY---N 641
YQ Q P + YG P QQ Y P + + P G+ PA SY N
Sbjct: 517 AGGGQSGYYQMQQPGVRPYGMQQGPVQQGYGPPQPAAAASSGDVPYQGATPAAPSYGSTN 576
Query: 642 QPPASAP-GYPQQAG----QAVPNYPQPGGQQAPSYGQVAPTAGYG-QYTNTQQA---YP 692
P GY G Q P+Y A + G P G Q + Q A Y
Sbjct: 577 MAPQQQQYGYTSSDGPVQQQTYPSYSSAPPSDAYNNGTQTPATGPAYQQQSVQPASSTYD 636
Query: 693 EQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQS-ASQSTAYG 751
+ A A GY G Q Q Y+Q A TQ Y+Q A+Q+ Y
Sbjct: 637 QTGAQQAAAAGYGG-QVAPTGGYTYPTSQPAYGSQAAYSQAAPTQTGYEQQPATQAAVYA 695
Query: 752 VAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
A GTA KT SPQ Y QYD++Q+YA PR
Sbjct: 696 TAPGTAPV---KTQSPQSAYAQYDASQVYATPR 725
Score = 157 (60.3 bits), Expect = 2.7e-103, Sum P(3) = 2.7e-103
Identities = 81/275 (29%), Positives = 100/275 (36%)
Query: 529 GYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXX 588
GY H P + YG + +P YS G + + YG+ G + G P
Sbjct: 404 GYPPQHMPPRGGYGTDWDQRPPYS------GPYNY-YGRQ--GAQSAGPVPPPSGPVPSP 454
Query: 589 XXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQ---QTY--PSYGSAPA---PDSY 640
Q QS+GP H PY+ +G Q QTY P Y S P P
Sbjct: 455 AFGGPPLSQVSYGYGQSHGPEYGHAA--PYSQTGYQQTYGQTYEQPKYDSNPPMQPPYGG 512
Query: 641 NQPPASA--PGYPQQAGQAVPNYPQPGGQQAPSYG--QVAPTAGYGQ--YTNTQQAYPEQ 694
+ PPA GY Q V Y G YG Q A A G Y A P
Sbjct: 513 SYPPAGGGQSGYYQMQQPGVRPYGMQQGPVQQGYGPPQPAAAASSGDVPYQGATPAAPSY 572
Query: 695 PATSNAG----YGYQGTQDXXXXXXXXXXXXXXXTGQPGY---AQPAATQPSYDQSASQ- 746
+T+ A YGY T Y Q AT P+Y Q + Q
Sbjct: 573 GSTNMAPQQQQYGY--TSSDGPVQQQTYPSYSSAPPSDAYNNGTQTPATGPAYQQQSVQP 630
Query: 747 -STAYGV--AQGTAAAGYGKTVSPQPGYPQYDSTQ 778
S+ Y AQ AAAGYG V+P GY Y ++Q
Sbjct: 631 ASSTYDQTGAQQAAAAGYGGQVAPTGGYT-YPTSQ 664
Score = 147 (56.8 bits), Expect = 3.1e-102, Sum P(3) = 3.1e-102
Identities = 77/250 (30%), Positives = 88/250 (35%)
Query: 534 HAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGK-PPYGMPAQGTQPQSYXXXXXXXXXX 592
HAP HPY H P SQG S Y+ +G PP MP +G +
Sbjct: 377 HAP--HPYDYHPRG-PYSSQG---SYYNSPGFGGYPPQHMPPRGGYGTDWDQRPPYSGPY 430
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYPYATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGY 650
Y Q AQS GP P P G P Q YG + P+ + P S GY
Sbjct: 431 NY-YGRQ--GAQSAGPVPPPSGPVPSPAFGGPPLSQVSYGYGQSHGPEYGHAAPYSQTGY 487
Query: 651 PQQAGQAV--PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQ 708
Q GQ P Y Q P YG P AG GQ Q +QP G Q
Sbjct: 488 QQTYGQTYEQPKYDSNPPMQPP-YGGSYPPAGGGQSGYYQM---QQPGVRPYGMQQGPVQ 543
Query: 709 DXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQS--ASQSTAYGVAQGTAAAGYGKTVS 766
G A PAA PSY + A Q YG T++ G V
Sbjct: 544 QGYGPPQPAAAASSGDVPYQG-ATPAA--PSYGSTNMAPQQQQYGY---TSSDG---PVQ 594
Query: 767 PQPGYPQYDS 776
Q YP Y S
Sbjct: 595 QQT-YPSYSS 603
Score = 107 (42.7 bits), Expect = 0.00094, Sum P(2) = 0.00093
Identities = 53/186 (28%), Positives = 67/186 (36%)
Query: 601 PSAQSYGPNVPHQQQY----PYATSGPTQQTYPSYGSAPAPDSYNQPPASAPG--YPQQA 654
P S GP+ PH Y PY++ G + P +G P P + PP G + Q+
Sbjct: 369 PQWGSRGPHAPHPYDYHPRGPYSSQGSYYNS-PGFGGYP-PQ--HMPPRGGYGTDWDQRP 424
Query: 655 GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXX 714
+ P Y G Q A S G V P +G A+ P S YGY +
Sbjct: 425 PYSGP-YNYYGRQGAQSAGPVPPPSG----PVPSPAFGGPPL-SQVSYGYGQSHGPEYGH 478
Query: 715 XXXXXXXXXXTG-QPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGY-GKTVSPQPGYP 772
TG Q Y Q QP YD + YG + A G G QPG
Sbjct: 479 AAPYSQ----TGYQQTYGQ-TYEQPKYDSNPPMQPPYGGSYPPAGGGQSGYYQMQQPGVR 533
Query: 773 QYDSTQ 778
Y Q
Sbjct: 534 PYGMQQ 539
Score = 61 (26.5 bits), Expect = 5.7e-123, Sum P(3) = 5.7e-123
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 38 DDEAKNSDEVEKNVDGFAEAHGSEVKRPRLDDDKTEKPDGPVNVNGLKEEK 88
DD+ K D + ++ + +G E ++ +DDD E DG NG +E K
Sbjct: 113 DDQVKPEDNQQGCIE---DVNGGEHQKV-IDDDSKEVNDGSSQENGKEENK 159
Score = 58 (25.5 bits), Expect = 5.2e-32, Sum P(3) = 5.2e-32
Identities = 20/60 (33%), Positives = 25/60 (41%)
Query: 393 PPQ-WGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL---PYGNYPPQQ-MAPRSNYGGPP 447
PPQ PRG + + D+ QR PY +Y G PP P +GGPP
Sbjct: 406 PPQHMPPRGGYGT-----DWDQRPPYSGPYNYYGRQGAQSAGPVPPPSGPVPSPAFGGPP 460
Score = 49 (22.3 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 16/48 (33%), Positives = 19/48 (39%)
Query: 390 PTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL-PYGNYPPQQ 436
P+GP G P ++Y Y Q S P Y H PY QQ
Sbjct: 447 PSGPVPSPAFGGPPLSQVSYGYGQ-----SHGPEYGHAAPYSQTGYQQ 489
>TAIR|locus:2012713 [details] [associations]
symbol:AT1G33680 "AT1G33680" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084 SMART:SM00322
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0003723
eggNOG:NOG300923 KO:K13210 UniGene:At.39892 UniGene:At.71035
HOGENOM:HOG000242545 EMBL:AK229850 EMBL:AK229909 EMBL:AK230055
IPI:IPI00786006 RefSeq:NP_174629.3 ProteinModelPortal:Q0WLY0
SMR:Q0WLY0 STRING:Q0WLY0 PaxDb:Q0WLY0 PRIDE:Q0WLY0
EnsemblPlants:AT1G33680.1 GeneID:840259 KEGG:ath:AT1G33680
TAIR:At1g33680 InParanoid:Q0WLY0 OMA:PSYGSTP PhylomeDB:Q0WLY0
ProtClustDB:CLSN2690290 Genevestigator:Q0WLY0 Uniprot:Q0WLY0
Length = 763
Score = 858 (307.1 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 209/483 (43%), Positives = 239/483 (49%)
Query: 283 ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS 342
A G+ A G EQ+EIKVP++KVG+IIGRGGETIK +QT+S ARIQLIPQ+ EGD S
Sbjct: 307 AGGVPALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQN--EGDAS 364
Query: 343 KERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSH 402
KER VR++GD RQI+IA +IK+V+ Q RPS SGGFNQQAY+PR P GPPQWG RG H
Sbjct: 365 KERTVRISGDKRQIDIATALIKDVMYQDGRPSPYSGGFNQQAYQPRGPGGPPQWGSRGPH 424
Query: 403 PSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPPNMXXXXXXXXXXXXX 462
M Y+Y GPYPSQ H+ G YPPQ M PRS YG
Sbjct: 425 GPHSMPYNYHHGGPYPSQGSHFRPPNSGGYPPQHMPPRSGYGSGWEQRPPHSGPYDYYGR 484
Query: 463 XXHVSDRPVSVSHSTSIPGHXXXXXXXXXXXXXXXXXNYNYGQPHTSEYXXXXXXXXXXX 522
+ PV SH S Y QPH Y
Sbjct: 485 QGGQNPGPVP-SHGASY-----------SQAGAQQTYGQMYDQPH---YDNPPMHQSYGG 529
Query: 523 XXXXGHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQ-- 580
GY A QH S+P QG + GY + PP +P QG P
Sbjct: 530 YGGSQQGYPS--AGGQHQM--QQPSRPYGMQGSAEQGYGPPRPAAPPGDVPYQGPTPAAP 585
Query: 581 SYXXXXXXXXXXXX----XYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA 636
SY Y S P+A SYG N+ QQQY YA+S PTQQTYPSY SA
Sbjct: 586 SYGSTPAAASYGSTPAAPSYGS-TPAAPSYGSNMAQQQQYGYASSAPTQQTYPSYSSAAP 644
Query: 637 PDSYN--QPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQ 694
D YN QPPA AP Y Q Q Q G YGQV PT GY Y +TQ AY
Sbjct: 645 SDGYNGTQPPAVAPAYEQHGAQPASGVQQTSG----GYGQVPPTGGYSSYPSTQPAYGNT 700
Query: 695 PATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQ 754
PA SN YGY G+Q TGQ Y+Q A Q Y+QSA+QS Y A
Sbjct: 701 PAQSNGNYGYIGSQ-YPSYGGGNASAYAAPTGQTAYSQTAPPQAGYEQSATQSAGYAAAP 759
Query: 755 GTA 757
GTA
Sbjct: 760 GTA 762
Score = 783 (280.7 bits), Expect = 2.4e-104, Sum P(3) = 2.4e-104
Identities = 157/244 (64%), Positives = 187/244 (76%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
+R+I+VP++KVG LIGK G+ +RYLQ NSGAKIQI RDA+ADP +A RPVEIIGT+S I+
Sbjct: 233 TRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIE 292
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAEKLINAVIAE +AGG P+L ARG+ EQ+EIKVP++KVG+IIGRGGETIK
Sbjct: 293 KAEKLINAVIAEVEAGGVPALAARGVP--------EQMEIKVPSDKVGVIIGRGGETIKN 344
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
+QT+S ARIQLIPQ+ EGD SKER VR++GD RQI+IA +IK+V+ Q RPS SGGF
Sbjct: 345 MQTKSRARIQLIPQN--EGDASKERTVRISGDKRQIDIATALIKDVMYQDGRPSPYSGGF 402
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPR 440
NQQAY+PR P GPPQWG RG H M Y+Y GPYPSQ H+ G YPPQ M PR
Sbjct: 403 NQQAYQPRGPGGPPQWGSRGPHGPHSMPYNYHHGGPYPSQGSHFRPPNSGGYPPQHMPPR 462
Query: 441 SNYG 444
S YG
Sbjct: 463 SGYG 466
Score = 234 (87.4 bits), Expect = 2.4e-104, Sum P(3) = 2.4e-104
Identities = 91/270 (33%), Positives = 104/270 (38%)
Query: 527 GHGYDDNH---APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYX 583
G YD H P+ YGG+ SQ Y G G HQ Q PYGM QG+ Q Y
Sbjct: 510 GQMYDQPHYDNPPMHQSYGGYGGSQQGYPSAG---GQHQMQQPSRPYGM--QGSAEQGYG 564
Query: 584 XXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQP 643
YQ P+A SYG + P Y G T PSYGS PA SY
Sbjct: 565 PPRPAAPPGDVPYQGPTPAAPSYG-STPAAASY-----GSTPAA-PSYGSTPAAPSYGSN 617
Query: 644 PASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYG--QYTNTQQAYPEQPATSNAG 701
A QQ G A P Q PSY AP+ GY Q AY EQ A
Sbjct: 618 MAQQ----QQYGYASS---APTQQTYPSYSSAAPSDGYNGTQPPAVAPAY-EQHGAQPAS 669
Query: 702 YGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ-PAATQPSYDQSASQSTAYGVAQGTAAAG 760
G Q T + QP Y PA + +Y SQ +YG +A A
Sbjct: 670 -GVQQTSGGYGQVPPTGGYSSYPSTQPAYGNTPAQSNGNYGYIGSQYPSYGGGNASAYAA 728
Query: 761 ------YGKTVSPQPGYPQYDSTQM--YAA 782
Y +T PQ GY Q +TQ YAA
Sbjct: 729 PTGQTAYSQTAPPQAGYEQ-SATQSAGYAA 757
Score = 208 (78.3 bits), Expect = 1.3e-101, Sum P(3) = 1.3e-101
Identities = 87/290 (30%), Positives = 108/290 (37%)
Query: 500 NYNYGQPHTSEYXXXXXXXXXXXXXXXGHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSG 559
NY++G P+ S+ G GY H P + YG +P +S G
Sbjct: 432 NYHHGGPYPSQ-------GSHFRPPNSG-GYPPQHMPPRSGYGSGWEQRPPHS-GPYD-- 480
Query: 560 YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYA 619
Y+ Q G+ P +P+ G + P QSYG QQ YP A
Sbjct: 481 YYGRQGGQNPGPVPSHGASYSQAGAQQTYGQMYDQPHYDNPPMHQSYGGYGGSQQGYPSA 540
Query: 620 TSGPTQQTYPS--YG-SAPAPDSYNQP-PASAPG-YPQQAGQAVPNYPQPGGQQAPSYGQ 674
G Q PS YG A Y P PA+ PG P Q P P APSYG
Sbjct: 541 -GGQHQMQQPSRPYGMQGSAEQGYGPPRPAAPPGDVPYQG-------PTPA---APSYGS 589
Query: 675 VAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXX--XXXTGQP--GY 730
A YG T +Y PA + G Q + P GY
Sbjct: 590 TPAAASYGS-TPAAPSYGSTPAAPSYGSNMAQQQQYGYASSAPTQQTYPSYSSAAPSDGY 648
Query: 731 --AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQ 778
QP A P+Y+Q +Q A GV Q + GYG+ V P GY Y STQ
Sbjct: 649 NGTQPPAVAPAYEQHGAQP-ASGVQQ--TSGGYGQ-VPPTGGYSSYPSTQ 694
Score = 180 (68.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 93/343 (27%), Positives = 112/343 (32%)
Query: 428 PY-GNYPPQQMAPRSNYGGPPNMXXXXXXXXXXX-XXXXHVSDRPVSVSHSTSIPGHXXX 485
PY G + Q PR GGPP H P SH P +
Sbjct: 397 PYSGGFNQQAYQPRGP-GGPPQWGSRGPHGPHSMPYNYHHGGPYPSQGSHFR--PPNSGG 453
Query: 486 XXXXXXXXXXXXXXNYNYGQPHTSEYXXXXXXXXXXXXXXXGHGYDDNHAPVQHPYGGHS 545
+ PH+ Y HG + A Q YG
Sbjct: 454 YPPQHMPPRSGYGSGWEQRPPHSGPYDYYGRQGGQNPGPVPSHGASYSQAGAQQTYG-QM 512
Query: 546 NSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQS 605
QP Y + Y YG G P+ G Q Q Q P +
Sbjct: 513 YDQPHYDNPPMHQSYGG--YGGSQQGYPSAGGQHQMQQPSRPYGMQGSAE-QGYGPPRPA 569
Query: 606 YGP-NVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY-PQQAGQAVPNYPQ 663
P +VP+Q P A S + SYGS PA SY PA AP Y A Q Y
Sbjct: 570 APPGDVPYQGPTPAAPSYGSTPAAASYGSTPAAPSYGSTPA-APSYGSNMAQQQQYGYAS 628
Query: 664 --PGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXX 721
P Q PSY AP+ GY TQ P PA + A Y G Q
Sbjct: 629 SAPTQQTYPSYSSAAPSDGYN---GTQ---P--PAVAPA-YEQHGAQPASGVQQTSGGYG 679
Query: 722 XXX-TGQPGYAQPAATQPSYDQSASQSTA-YGVAQGTAAAGYG 762
TG GY+ +TQP+Y + +QS YG G+ YG
Sbjct: 680 QVPPTG--GYSSYPSTQPAYGNTPAQSNGNYGYI-GSQYPSYG 719
Score = 131 (51.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 62/199 (31%), Positives = 74/199 (37%)
Query: 601 PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSA-PAPDSYNQPPASAP---GYPQQAGQ 656
P S GP+ PH Y Y GP YPS GS P+S PP P GY Q
Sbjct: 416 PQWGSRGPHGPHSMPYNYHHGGP----YPSQGSHFRPPNSGGYPPQHMPPRSGYGSGWEQ 471
Query: 657 AVPN------YPQPGGQQ---APSYGQVAPTAG----YGQYTNTQQAYPEQPATSNAGYG 703
P+ Y + GGQ PS+G AG YGQ + Q Y P + G G
Sbjct: 472 RPPHSGPYDYYGRQGGQNPGPVPSHGASYSQAGAQQTYGQMYD-QPHYDNPPMHQSYG-G 529
Query: 704 YQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGK 763
Y G+Q GQ QP+ +P Y S YG + A G
Sbjct: 530 YGGSQQGYPSAG----------GQHQMQQPS--RP-YGMQGSAEQGYGPPRPAAPPGDVP 576
Query: 764 TVSPQPGYPQYDSTQMYAA 782
P P P Y ST A+
Sbjct: 577 YQGPTPAAPSYGSTPAAAS 595
Score = 97 (39.2 bits), Expect = 6.0e-90, Sum P(3) = 6.0e-90
Identities = 47/150 (31%), Positives = 59/150 (39%)
Query: 528 HGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYG-MPAQGTQPQSYXXXX 586
+GY + AP Q Y +S++ P G Q Y + +G PA G Q S
Sbjct: 624 YGYASS-APTQQTYPSYSSAAPSDGYNGTQPPAVAPAYEQ--HGAQPASGVQQTSGGYGQ 680
Query: 587 XXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYG----SA-PAPD--- 638
Y S P+ YG N P Q Y G +Q YPSYG SA AP
Sbjct: 681 VPPTGGYSSYPSTQPA---YG-NTPAQSNGNYGYIG-SQ--YPSYGGGNASAYAAPTGQT 733
Query: 639 SYNQPPASAPGYPQQAGQAVPNYPQPGGQQ 668
+Y+Q GY Q A Q+ PG Q
Sbjct: 734 AYSQTAPPQAGYEQSATQSAGYAAAPGTAQ 763
Score = 50 (22.7 bits), Expect = 2.4e-104, Sum P(3) = 2.4e-104
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 31 EHAEGMRDDEAKNSDEVEKNVDGFAEAHGSEVKRPRLDDDKTEKPDGPVNVNGLKEEKPD 90
+HA G D++ D+ KN + + KRP+LDD E DG + + G E D
Sbjct: 31 QHA-GSIDNDVSVDDD--KNASDYCQP-----KRPKLDD---EAVDG-LGIGGTVENSGD 78
>TAIR|locus:2043530 [details] [associations]
symbol:AT2G25970 "AT2G25970" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003723 EMBL:AC004747 EMBL:AC005395
eggNOG:NOG300923 KO:K13210 HSSP:Q9UNW9 EMBL:AY078954 EMBL:AK226845
IPI:IPI00540360 PIR:T02627 RefSeq:NP_180167.1 UniGene:At.21555
ProteinModelPortal:O82762 SMR:O82762 STRING:O82762 PaxDb:O82762
PRIDE:O82762 ProMEX:O82762 EnsemblPlants:AT2G25970.1 GeneID:817137
KEGG:ath:AT2G25970 TAIR:At2g25970 HOGENOM:HOG000242545
InParanoid:O82762 OMA:AANSTQD PhylomeDB:O82762
ProtClustDB:CLSN2913011 ArrayExpress:O82762 Genevestigator:O82762
Uniprot:O82762
Length = 632
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 179/503 (35%), Positives = 240/503 (47%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++KI++PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP+ ATR V++ GT I
Sbjct: 135 TKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQIS 194
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LI V+ EA+AG + G A+Q +K+PN KVGLIIG+GGETIK
Sbjct: 195 KAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKS 254
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPSTLSG 378
+Q ++GARIQ+IP HLP GD + ER +++ G QIE A++++ E++S +R S + G
Sbjct: 255 MQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNEIISGENRMRNSAMGG 314
Query: 379 GFNQQA-YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQM 437
G+ QQ Y+ R P+ W P G P+QP Y Q G YP P Y PYG+YP Q
Sbjct: 315 GYPQQGGYQARPPSS---WAPPGGPPAQPGYGGYMQPGAYPGP-PQYGQSPYGSYPQQTS 370
Query: 438 APRSNYGG-PPNMXXXXXXXXXXXXXXXHVSDRPVSVSHSTSIPGHXXXXXXXXXXXXXX 496
A + PP+ S + T G+
Sbjct: 371 AGYYDQSSVPPSQQSAQGEYDYYGQQQSQQPSSGGSSAPPTDTTGYNYYQHASGYGQAGQ 430
Query: 497 XXXNYNYGQPHTSEYXXXXXXXXXXXXXXXGHGYDDNHAPVQHPYGGHSNSQPVYSQGGL 556
YG + S+ G+G N P Q + + P +Q G
Sbjct: 431 GYQQDGYGAYNASQQSGYGQAAGYDQQG--GYGSTTN--PSQEEDASQA-APPSSAQSG- 484
Query: 557 QSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQY 616
Q+GY G+ P PAQG+ Q+ Y SQ +A + G P
Sbjct: 485 QAGYGTT--GQQP---PAQGSTGQA---GYGAPPTSQAGYSSQPAAAYNSGYGAPPPASK 536
Query: 617 PYATSGPTQQT--YP-SYGSA-----PAPDSYNQPPASAPGYPQQAGQAVPNYPQPG-GQ 667
P T G +QQ+ P SYGS PA Y QPPA G Q + Y QP G
Sbjct: 537 P-PTYGQSQQSPGAPGSYGSQSGYAQPAASGYGQPPAYGYGQAPQGYGSYGGYTQPAAGG 595
Query: 668 QAPSYGQVAPTAGYGQYTNTQQA 690
S G TAG G T Q+
Sbjct: 596 GYSSDGSAGATAGGGGGTPASQS 618
Score = 169 (64.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 89/287 (31%), Positives = 104/287 (36%)
Query: 529 GYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQH--QYGKPPYGM-PAQ---GTQPQSY 582
GY P GG +QP Y G +Q G + QYG+ PYG P Q G QS
Sbjct: 321 GYQARPPSSWAPPGGPP-AQPGYG-GYMQPGAYPGPPQYGQSPYGSYPQQTSAGYYDQSS 378
Query: 583 XXXXXXXXXXXXXYQSQVPSAQ--SYGPNVP-----------HQQQYPYATSGPTQQTYP 629
Y Q S Q S G + P H Y A G Q Y
Sbjct: 379 VPPSQQSAQGEYDYYGQQQSQQPSSGGSSAPPTDTTGYNYYQHASGYGQAGQGYQQDGYG 438
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAV---PNYPQPGGQQAPSYGQVAPTAGYGQYTN 686
+Y +A Y Q A GY QQ G P+ + Q AP + AGYG T
Sbjct: 439 AY-NASQQSGYGQ----AAGYDQQGGYGSTTNPSQEEDASQAAPPSSAQSGQAGYG--TT 491
Query: 687 TQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQ 746
QQ P Q +T AGYG T P PA+ P+Y QS
Sbjct: 492 GQQP-PAQGSTGQAGYGAPPTSQAGYSSQPAAAYNSGYGAPP----PASKPPTYGQSQQS 546
Query: 747 STA---YGVAQG---TAAAGYGKTVSPQPGY---PQ-YDSTQMYAAP 783
A YG G AA+GYG+ P GY PQ Y S Y P
Sbjct: 547 PGAPGSYGSQSGYAQPAASGYGQP--PAYGYGQAPQGYGSYGGYTQP 591
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 69/251 (27%), Positives = 86/251 (34%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX---XX 594
Q P G S++ P + G Y+QH G YG QG Q Y
Sbjct: 399 QQPSSGGSSAPPTDTTG---YNYYQHASG---YGQAGQGYQQDGYGAYNASQQSGYGQAA 452
Query: 595 XYQSQVPSAQSYGPNV---------PHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPA 645
Y Q + P+ P Q A G T Q P+ GS Y PP
Sbjct: 453 GYDQQGGYGSTTNPSQEEDASQAAPPSSAQSGQAGYGTTGQQPPAQGST-GQAGYGAPPT 511
Query: 646 SAPGYPQQAGQAVPN-Y-PQPGGQQAPSYGQVAPTAGY-GQYTNTQQAYPEQPATSNAGY 702
S GY Q A + Y P + P+YGQ + G G Y +Q Y QPA S GY
Sbjct: 512 SQAGYSSQPAAAYNSGYGAPPPASKPPTYGQSQQSPGAPGSY-GSQSGYA-QPAAS--GY 567
Query: 703 GYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYG 762
G GY QPAA Y S G GT A+
Sbjct: 568 GQPPAYGYGQAPQGYGSYG-------GYTQPAAGG-GYSSDGSAGATAGGGGGTPAS--- 616
Query: 763 KTVSPQPGYPQ 773
++ +P G P+
Sbjct: 617 QSAAPPAGPPK 627
>RGD|621828 [details] [associations]
symbol:Khsrp "KH-type splicing regulatory protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=ISO] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621828 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0043025 GO:GO:0030425
GO:GO:0006397 GO:GO:0006351 GO:GO:0003730 GO:GO:0051028
HOVERGEN:HBG000625 KO:K13210 InterPro:IPR015096 Pfam:PF09005
CTD:8570 EMBL:AF308818 IPI:IPI00200920 RefSeq:NP_598286.1
UniGene:Rn.92643 ProteinModelPortal:Q99PF5 SMR:Q99PF5
PhosphoSite:Q99PF5 REPRODUCTION-2DPAGE:Q99PF5 PRIDE:Q99PF5
GeneID:171137 KEGG:rno:171137 NextBio:621918 Genevestigator:Q99PF5
Uniprot:Q99PF5
Length = 721
Score = 256 (95.2 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 70/241 (29%), Positives = 118/241 (48%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAG-----GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+P + G + G ++ +P K GL+IGRG
Sbjct: 385 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E + + P
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKIEGPLCPV 503
Query: 375 TLSGGFNQQAYRPRVP--TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNPHYPHL 427
G A P P GP GP G+ H P + YP +G YP P PH
Sbjct: 504 GPGPGGPGPA-GPMGPFHPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPEWQPPAPHD 562
Query: 428 P 428
P
Sbjct: 563 P 563
Score = 239 (89.2 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 65/204 (31%), Positives = 109/204 (53%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G +
Sbjct: 145 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPES 201
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETI
Sbjct: 202 VQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETI 257
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ LI + K +R+ GD +++ A EM+ ++L + + G
Sbjct: 258 KQLQERAGVKMILIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----G 310
Query: 379 GF-NQQAYRPRVPTGPPQWGPRGS 401
GF ++ Y RV G PR S
Sbjct: 311 GFGDRNEYGSRVGGGIDVPVPRHS 334
Score = 213 (80.0 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 61/202 (30%), Positives = 101/202 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 237 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 295
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 296 ACEMVMDILRERDQGGFGDRNEYG---SRVGGG---IDVPVPRHSVGVVIGRSGEMIKKI 349
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSG 378
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P
Sbjct: 350 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPDRCEHAARIINDLL-QSLRSGPPGPPGA 404
Query: 379 GFNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 405 PGMPPGGRGR-GRGQGNWGPPG 425
Score = 109 (43.4 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 50/171 (29%), Positives = 61/171 (35%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P PH A + + +Y S Y QPP PG P A A P +P
Sbjct: 557 PPAPHDPNKAAAAATDPNAAWAAYYS----HYYQQPPGPVPG-PAPAPAAPPAQGEP--P 609
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
Q P GQ T + +Y P+QP G QD
Sbjct: 610 QPPPTGQSDYTKAWEEYYKKIGQQPQQP-------GAPPQQDYTKAWEEYYKKQAQVATG 662
Query: 728 PGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQ 778
G P +QP Y SA+ + Y AA YG+T P PG PQ STQ
Sbjct: 663 GGPGAPPGSQPDY--SAAWAEYYR----QQAAYYGQT--PGPGGPQPPSTQ 705
Score = 95 (38.5 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 45/172 (26%), Positives = 59/172 (34%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMP----------AQG 576
G+ Y + P P+ + + + Y+ H Y +PP +P AQG
Sbjct: 549 GNTYPEWQPPA--PHDPNKAAAAATDPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQG 606
Query: 577 TQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGP-TQQTYPSYGSAP 635
PQ Y ++ Q P P QQ Y A +Q + G P
Sbjct: 607 EPPQPPPTGQSDYTKAWEEYYKKI-GQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGP 665
Query: 636 APDSYNQPPASAPG---YPQQAGQAVPNYPQPGGQQAPS--YGQVAPTAGYG 682
+QP SA Y QQA P PGG Q PS GQ T G
Sbjct: 666 GAPPGSQPDYSAAWAEYYRQQAAY-YGQTPGPGGPQPPSTQQGQQQATEANG 716
Score = 89 (36.4 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 55/223 (24%), Positives = 76/223 (34%)
Query: 540 PYG-GHSNSQPVYSQGGLQSG-YHQHQYGKPPY--GMPAQGTQPQSYXXXXXXXXXXXXX 595
P G G P G G ++Q G PP+ G P PQ +
Sbjct: 502 PVGPGPGGPGPAGPMGPFHPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPEWQPPAPH 561
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQA 654
++ +A + PN Y + P P APA P + +PP P
Sbjct: 562 DPNKAAAAAT-DPNAAWAAYYSHYYQQPPGPV-PGPAPAPAAPPAQGEPPQPPPTGQSDY 619
Query: 655 GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY---QGTQ-DX 710
+A Y + GQQ G AP YT + Y ++ A G G G+Q D
Sbjct: 620 TKAWEEYYKKIGQQPQQPG--APPQQ--DYTKAWEEYYKKQAQVATGGGPGAPPGSQPDY 675
Query: 711 XXXXXXXXXXXXXXTGQ---PGYAQPAATQPSYDQSASQSTAY 750
GQ PG QP +TQ Q A+++ Y
Sbjct: 676 SAAWAEYYRQQAAYYGQTPGPGGPQPPSTQQG-QQQATEANGY 717
Score = 76 (31.8 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNPHYPHLPYGNYPPQ 435
P P GP GP G P+ PM +P +GP P PH P YPPQ
Sbjct: 499 PLCPVGP---GPGGPGPAGPMGPFHPGPFNQGP-PGAPPHAGGPPPHQYPPQ 546
Score = 61 (26.5 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 39/149 (26%), Positives = 44/149 (29%)
Query: 643 PPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVA--------PTAGYGQ-YTNTQQAYPE 693
P PG P AG P +P P Q P A P G+G Y Q P
Sbjct: 502 PVGPGPGGPGPAGPMGPFHPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPEWQPPAPH 561
Query: 694 QPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ-PGYAQPAATQPSYDQSASQSTAYGV 752
P + A T G PG A PA P Q G
Sbjct: 562 DPNKAAAA----ATDPNAAWAAYYSHYYQQPPGPVPGPA-PAPAAPPAQGEPPQPPPTGQ 616
Query: 753 AQGTAA-AGYGKTVSPQPGYPQYDSTQMY 780
+ T A Y K + QP P Q Y
Sbjct: 617 SDYTKAWEEYYKKIGQQPQQPGAPPQQDY 645
>UNIPROTKB|F6Y140 [details] [associations]
symbol:KHSRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
OMA:QASGNCH GeneTree:ENSGT00650000093048 EMBL:AAEX03012495
Ensembl:ENSCAFT00000029641 Uniprot:F6Y140
Length = 602
Score = 254 (94.5 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
Identities = 69/241 (28%), Positives = 117/241 (48%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 183 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 239
Query: 264 KLINAVIAEADAG-----GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRG 314
++IN ++ +G G P + G + G ++ +P K GL+IGRG
Sbjct: 240 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 299
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E + + P
Sbjct: 300 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPV 358
Query: 375 TLSGGFNQQAYRPRVP--TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNPHYPHL 427
G A P P GP GP G+ H P + YP +G YP P PH
Sbjct: 359 GPGPGGPGPA-GPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHD 417
Query: 428 P 428
P
Sbjct: 418 P 418
Score = 237 (88.5 bits), Expect = 3.4e-26, Sum P(3) = 3.4e-26
Identities = 64/203 (31%), Positives = 108/203 (53%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G ++
Sbjct: 1 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPESV 57
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETIK
Sbjct: 58 QKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETIK 113
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
LQ R+G ++ LI + K +R+ GD +++ A EM+ ++L + + GG
Sbjct: 114 QLQERAGVKMILIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----GG 166
Query: 380 F-NQQAYRPRVPTGPPQWGPRGS 401
F ++ Y R+ G PR S
Sbjct: 167 FGDRNEYGSRIGGGIDVPVPRHS 189
Score = 218 (81.8 bits), Expect = 5.2e-24, Sum P(3) = 5.2e-24
Identities = 62/202 (30%), Positives = 102/202 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 92 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 150
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 151 ACEMVMDILRERDQGGFGDRNEYG---SRIGGG---IDVPVPRHSVGVVIGRSGEMIKKI 204
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSG 378
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P G
Sbjct: 205 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPDRCEHAARIINDLL-QSLRSGPPGPPGG 259
Query: 379 GFNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 260 PGMPPGGRGR-GRGQGNWGPPG 280
Score = 157 (60.3 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 47/164 (28%), Positives = 76/164 (46%)
Query: 277 GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
G P + G + G ++ +P K GL+IGRGGE +K + ++GA +++
Sbjct: 258 GGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEIS 317
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVP-- 390
Q P GD + + + + G +QI+ A+++I+E + + P G A P P
Sbjct: 318 RQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA-GPMGPFN 375
Query: 391 TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNP---HYPH 426
GP GP G+ H P + YP +G YP P H P+
Sbjct: 376 PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPN 419
Score = 107 (42.7 bits), Expect = 3.4e-26, Sum P(3) = 3.4e-26
Identities = 56/184 (30%), Positives = 68/184 (36%)
Query: 607 GPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASA-PG---------YPQQAGQ 656
GP PHQ YP G TYP + PAP N+ A+A P Y QQ
Sbjct: 392 GPP-PHQ--YPPQGWG---NTYPQW-QPPAPHDPNKAAAAADPNAAWAAYYSHYYQQPPG 444
Query: 657 AVPNYPQPGGQQAPSYGQVA--PTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXX 714
VP P P P+ G+ P AG YT + Y ++ G QD
Sbjct: 445 PVPG-PAPAPAAPPAQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAW 503
Query: 715 XXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQY 774
G P +QP Y SA+ + Y AA YG+T P PG PQ
Sbjct: 504 EEYYKKQAQVATGGGPGAPPGSQPDY--SAAWAEYYR----QQAAYYGQT--PGPGGPQP 555
Query: 775 DSTQ 778
TQ
Sbjct: 556 PPTQ 559
Score = 95 (38.5 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25
Identities = 50/183 (27%), Positives = 62/183 (33%)
Query: 527 GHGYDDNHAPVQH-PYGGHSNSQPVYSQGGLQSGYHQHQYGK-P-----PYGMPAQGTQP 579
G+ Y P H P + + P + S Y+Q G P P PAQG P
Sbjct: 404 GNTYPQWQPPAPHDPNKAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPP 463
Query: 580 QSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGP-TQQTYPSYGSAPAPD 638
Q Y ++ Q P P QQ Y A +Q + G P
Sbjct: 464 QPPPAGQSDYTKAWEEYYKKI-GQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAP 522
Query: 639 SYNQPPASAPG---YPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
+QP SA Y QQA P PGG Q P PT GQ + +P P
Sbjct: 523 PGSQPDYSAAWAEYYRQQAAY-YGQTPGPGGPQPP------PTQ-QGQQQASGNCHPPPP 574
Query: 696 ATS 698
S
Sbjct: 575 PFS 577
Score = 86 (35.3 bits), Expect = 5.0e-24, Sum P(3) = 5.0e-24
Identities = 38/140 (27%), Positives = 46/140 (32%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ-GTQPQSYXXXXXXXXXXX 593
AP P G P Q + + Y K P Q G PQ
Sbjct: 452 APAAPPAQGEPPQPPPAGQSDYTKAWEE--YYKKIGQQPQQPGAPPQQ-----DYTKAWE 504
Query: 594 XXYQSQVPSAQSYGPNVP--HQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y+ Q A GP P Q Y A + +Q YG P P QPP + G
Sbjct: 505 EYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGG-PQPPPTQQGQQ 563
Query: 652 QQAGQAVPNYPQPGGQQAPS 671
Q +G P P P Q P+
Sbjct: 564 QASGNCHPP-PPPFSFQPPA 582
Score = 85 (35.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 57/213 (26%), Positives = 70/213 (32%)
Query: 543 GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQG---TQPQSYXXXXXXXXXXXXXYQSQ 599
G N P ++QG G H G PP+ P QG T PQ
Sbjct: 372 GPFNPGP-FNQG--PPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAADPN 428
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQAGQAV 658
A Y H Q P GP P APA P + +PP P +A
Sbjct: 429 AAWAAYYS----HYYQQP---PGPV----PGPAPAPAAPPAQGEPPQPPPAGQSDYTKAW 477
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY---QGTQ-DXXXXX 714
Y + GQQ G AP YT + Y ++ A G G G+Q D
Sbjct: 478 EEYYKKIGQQPQQPG--APPQQ--DYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAW 533
Query: 715 XXXXXXXXXXTGQ---PGYAQPAATQPSYDQSA 744
GQ PG QP TQ Q++
Sbjct: 534 AEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAS 566
Score = 72 (30.4 bits), Expect = 3.4e-26, Sum P(3) = 3.4e-26
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNPHYPHLPYGNYPPQ 435
P P GP GP G P+ PM P +GP P PH P YPPQ
Sbjct: 354 PLCPVGP---GPGGPGPAGPMGPFNPGPFNQGP-PGAPPHAGGPPPHQYPPQ 401
Score = 63 (27.2 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 28/90 (31%), Positives = 32/90 (35%)
Query: 571 GMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS 630
G P G+QP Y Y Q P GP P QQ SG +P
Sbjct: 520 GAPP-GSQPD-YSAAWAEYYRQQAAYYGQTPGPG--GPQPPPTQQGQQQASG---NCHPP 572
Query: 631 YGSAPAPDSYNQPPASA-PGYPQQAGQAVP 659
P P S+ QPPA+ P AG P
Sbjct: 573 ----PPPFSF-QPPATVHPALVGSAGNPFP 597
Score = 57 (25.1 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 19/58 (32%), Positives = 24/58 (41%)
Query: 394 PQWGPRGSH-PSQPMAYDYPQRGPYPSQNPHYPHLPYGNYP---PQQMAPRSNYGGPP 447
PQW P H P++ A P + + HY P G P P AP + G PP
Sbjct: 408 PQWQPPAPHDPNKAAAAADPNAA-WAAYYSHYYQQPPGPVPGPAPAPAAPPAQ-GEPP 463
Score = 54 (24.1 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 36/145 (24%), Positives = 43/145 (29%)
Query: 643 PPASAPGYPQQAGQAVPNYPQP---GGQQAPSYGQVAPTAGYGQ--YTNTQQAYPEQPAT 697
P PG P AG P P P G AP + P Y + NT + + PA
Sbjct: 357 PVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQW-QPPAP 415
Query: 698 SNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ-PGYAQPAATQPSYDQSASQSTAYGVAQGT 756
+ G PG A PA P Q G + T
Sbjct: 416 HDPNKAAAAADPNAAWAAYYSHYYQQPPGPVPGPA-PAPAAPPAQGEPPQPPPAGQSDYT 474
Query: 757 AA-AGYGKTVSPQPGYPQYDSTQMY 780
A Y K + QP P Q Y
Sbjct: 475 KAWEEYYKKIGQQPQQPGAPPQQDY 499
Score = 41 (19.5 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 397 GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAP 439
GP G P P Q+ S N H P P+ PP + P
Sbjct: 549 GPGGPQP--PPTQQGQQQA---SGNCHPPPPPFSFQPPATVHP 586
>UNIPROTKB|E2QVT3 [details] [associations]
symbol:KHSRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
Ensembl:ENSCAFT00000029641 Uniprot:E2QVT3
Length = 743
Score = 254 (94.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 69/241 (28%), Positives = 117/241 (48%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 324 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 380
Query: 264 KLINAVIAEADAG-----GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRG 314
++IN ++ +G G P + G + G ++ +P K GL+IGRG
Sbjct: 381 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 440
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E + + P
Sbjct: 441 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPV 499
Query: 375 TLSGGFNQQAYRPRVP--TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNPHYPHL 427
G A P P GP GP G+ H P + YP +G YP P PH
Sbjct: 500 GPGPGGPGPA-GPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHD 558
Query: 428 P 428
P
Sbjct: 559 P 559
Score = 238 (88.8 bits), Expect = 8.7e-26, Sum P(3) = 8.7e-26
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G +
Sbjct: 141 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPES 197
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETI
Sbjct: 198 VQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETI 253
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ LI + K +R+ GD +++ A EM+ ++L + + G
Sbjct: 254 KQLQERAGVKMILIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----G 306
Query: 379 GF-NQQAYRPRVPTGPPQWGPRGS 401
GF ++ Y R+ G PR S
Sbjct: 307 GFGDRNEYGSRIGGGIDVPVPRHS 330
Score = 218 (81.8 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 62/202 (30%), Positives = 102/202 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 233 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 291
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 292 ACEMVMDILRERDQGGFGDRNEYG---SRIGGG---IDVPVPRHSVGVVIGRSGEMIKKI 345
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSG 378
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P G
Sbjct: 346 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPDRCEHAARIINDLL-QSLRSGPPGPPGG 400
Query: 379 GFNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 401 PGMPPGGRGR-GRGQGNWGPPG 421
Score = 157 (60.3 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 47/164 (28%), Positives = 76/164 (46%)
Query: 277 GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
G P + G + G ++ +P K GL+IGRGGE +K + ++GA +++
Sbjct: 399 GGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEIS 458
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVP-- 390
Q P GD + + + + G +QI+ A+++I+E + + P G A P P
Sbjct: 459 RQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA-GPMGPFN 516
Query: 391 TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNP---HYPH 426
GP GP G+ H P + YP +G YP P H P+
Sbjct: 517 PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPN 560
Score = 107 (42.7 bits), Expect = 8.7e-26, Sum P(3) = 8.7e-26
Identities = 56/184 (30%), Positives = 68/184 (36%)
Query: 607 GPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASA-PG---------YPQQAGQ 656
GP PHQ YP G TYP + PAP N+ A+A P Y QQ
Sbjct: 533 GPP-PHQ--YPPQGWG---NTYPQW-QPPAPHDPNKAAAAADPNAAWAAYYSHYYQQPPG 585
Query: 657 AVPNYPQPGGQQAPSYGQVA--PTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXX 714
VP P P P+ G+ P AG YT + Y ++ G QD
Sbjct: 586 PVPG-PAPAPAAPPAQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAW 644
Query: 715 XXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQY 774
G P +QP Y SA+ + Y AA YG+T P PG PQ
Sbjct: 645 EEYYKKQAQVATGGGPGAPPGSQPDY--SAAWAEYYR----QQAAYYGQT--PGPGGPQP 696
Query: 775 DSTQ 778
TQ
Sbjct: 697 PPTQ 700
Score = 95 (38.5 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 50/183 (27%), Positives = 62/183 (33%)
Query: 527 GHGYDDNHAPVQH-PYGGHSNSQPVYSQGGLQSGYHQHQYGK-P-----PYGMPAQGTQP 579
G+ Y P H P + + P + S Y+Q G P P PAQG P
Sbjct: 545 GNTYPQWQPPAPHDPNKAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPP 604
Query: 580 QSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGP-TQQTYPSYGSAPAPD 638
Q Y ++ Q P P QQ Y A +Q + G P
Sbjct: 605 QPPPAGQSDYTKAWEEYYKKI-GQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAP 663
Query: 639 SYNQPPASAPG---YPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
+QP SA Y QQA P PGG Q P PT GQ + +P P
Sbjct: 664 PGSQPDYSAAWAEYYRQQAAY-YGQTPGPGGPQPP------PTQ-QGQQQASGNCHPPPP 715
Query: 696 ATS 698
S
Sbjct: 716 PFS 718
Score = 86 (35.3 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 38/140 (27%), Positives = 46/140 (32%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ-GTQPQSYXXXXXXXXXXX 593
AP P G P Q + + Y K P Q G PQ
Sbjct: 593 APAAPPAQGEPPQPPPAGQSDYTKAWEE--YYKKIGQQPQQPGAPPQQ-----DYTKAWE 645
Query: 594 XXYQSQVPSAQSYGPNVP--HQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y+ Q A GP P Q Y A + +Q YG P P QPP + G
Sbjct: 646 EYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGG-PQPPPTQQGQQ 704
Query: 652 QQAGQAVPNYPQPGGQQAPS 671
Q +G P P P Q P+
Sbjct: 705 QASGNCHPP-PPPFSFQPPA 723
Score = 85 (35.0 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 57/213 (26%), Positives = 70/213 (32%)
Query: 543 GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQG---TQPQSYXXXXXXXXXXXXXYQSQ 599
G N P ++QG G H G PP+ P QG T PQ
Sbjct: 513 GPFNPGP-FNQG--PPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAADPN 569
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQAGQAV 658
A Y H Q P GP P APA P + +PP P +A
Sbjct: 570 AAWAAYYS----HYYQQP---PGPV----PGPAPAPAAPPAQGEPPQPPPAGQSDYTKAW 618
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY---QGTQ-DXXXXX 714
Y + GQQ G AP YT + Y ++ A G G G+Q D
Sbjct: 619 EEYYKKIGQQPQQPG--APPQQ--DYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAW 674
Query: 715 XXXXXXXXXXTGQ---PGYAQPAATQPSYDQSA 744
GQ PG QP TQ Q++
Sbjct: 675 AEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAS 707
Score = 72 (30.4 bits), Expect = 8.7e-26, Sum P(3) = 8.7e-26
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNPHYPHLPYGNYPPQ 435
P P GP GP G P+ PM P +GP P PH P YPPQ
Sbjct: 495 PLCPVGP---GPGGPGPAGPMGPFNPGPFNQGP-PGAPPHAGGPPPHQYPPQ 542
Score = 63 (27.2 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 28/90 (31%), Positives = 32/90 (35%)
Query: 571 GMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS 630
G P G+QP Y Y Q P GP P QQ SG +P
Sbjct: 661 GAPP-GSQPD-YSAAWAEYYRQQAAYYGQTPGPG--GPQPPPTQQGQQQASG---NCHPP 713
Query: 631 YGSAPAPDSYNQPPASA-PGYPQQAGQAVP 659
P P S+ QPPA+ P AG P
Sbjct: 714 ----PPPFSF-QPPATVHPALVGSAGNPFP 738
Score = 57 (25.1 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 19/58 (32%), Positives = 24/58 (41%)
Query: 394 PQWGPRGSH-PSQPMAYDYPQRGPYPSQNPHYPHLPYGNYP---PQQMAPRSNYGGPP 447
PQW P H P++ A P + + HY P G P P AP + G PP
Sbjct: 549 PQWQPPAPHDPNKAAAAADPNAA-WAAYYSHYYQQPPGPVPGPAPAPAAPPAQ-GEPP 604
Score = 54 (24.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 36/145 (24%), Positives = 43/145 (29%)
Query: 643 PPASAPGYPQQAGQAVPNYPQP---GGQQAPSYGQVAPTAGYGQ--YTNTQQAYPEQPAT 697
P PG P AG P P P G AP + P Y + NT + + PA
Sbjct: 498 PVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQW-QPPAP 556
Query: 698 SNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ-PGYAQPAATQPSYDQSASQSTAYGVAQGT 756
+ G PG A PA P Q G + T
Sbjct: 557 HDPNKAAAAADPNAAWAAYYSHYYQQPPGPVPGPA-PAPAAPPAQGEPPQPPPAGQSDYT 615
Query: 757 AA-AGYGKTVSPQPGYPQYDSTQMY 780
A Y K + QP P Q Y
Sbjct: 616 KAWEEYYKKIGQQPQQPGAPPQQDY 640
Score = 41 (19.5 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 397 GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAP 439
GP G P P Q+ S N H P P+ PP + P
Sbjct: 690 GPGGPQP--PPTQQGQQQA---SGNCHPPPPPFSFQPPATVHP 727
>MGI|MGI:1336214 [details] [associations]
symbol:Khsrp "KH-type splicing regulatory protein"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] Reactome:REACT_78136
Reactome:REACT_88316 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS00178 PROSITE:PS50084 SMART:SM00322
MGI:MGI:1336214 GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0006351
GO:GO:0003723 GO:GO:0051028 GO:GO:0010494 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 CTD:8570 OMA:QASGNCH EMBL:AK156541
EMBL:CT571247 EMBL:BC064454 EMBL:BC108414 IPI:IPI00462934
RefSeq:NP_034743.3 UniGene:Mm.34296 HSSP:Q91WJ8
ProteinModelPortal:Q3U0V1 SMR:Q3U0V1 IntAct:Q3U0V1 STRING:Q3U0V1
PhosphoSite:Q3U0V1 PaxDb:Q3U0V1 PRIDE:Q3U0V1 DNASU:16549
Ensembl:ENSMUST00000007814 GeneID:16549 KEGG:mmu:16549
UCSC:uc008ddr.2 GeneTree:ENSGT00650000093048 InParanoid:Q3U0V1
OrthoDB:EOG451DQX NextBio:290019 Bgee:Q3U0V1 CleanEx:MM_KHSRP
Genevestigator:Q3U0V1 Uniprot:Q3U0V1
Length = 748
Score = 256 (95.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 70/241 (29%), Positives = 118/241 (48%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAG-----GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+P + G + G ++ +P K GL+IGRG
Sbjct: 385 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E + + P
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKIEGPLCPV 503
Query: 375 TLSGGFNQQAYRPRVP--TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNPHYPHL 427
G A P P GP GP G+ H P + YP +G YP P PH
Sbjct: 504 GPGPGGPGPA-GPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHD 562
Query: 428 P 428
P
Sbjct: 563 P 563
Score = 239 (89.2 bits), Expect = 8.1e-24, Sum P(3) = 8.1e-24
Identities = 65/204 (31%), Positives = 109/204 (53%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G +
Sbjct: 145 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPES 201
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETI
Sbjct: 202 VQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETI 257
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ LI + K +R+ GD +++ A EM+ ++L + + G
Sbjct: 258 KQLQERAGVKMILIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----G 310
Query: 379 GF-NQQAYRPRVPTGPPQWGPRGS 401
GF ++ Y RV G PR S
Sbjct: 311 GFGDRNEYGSRVGGGIDVPVPRHS 334
Score = 213 (80.0 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 61/202 (30%), Positives = 101/202 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 237 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 295
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 296 ACEMVMDILRERDQGGFGDRNEYG---SRVGGG---IDVPVPRHSVGVVIGRSGEMIKKI 349
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSG 378
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P
Sbjct: 350 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPDRCEHAARIINDLL-QSLRSGPPGPPGA 404
Query: 379 GFNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 405 PGMPPGGRGR-GRGQGNWGPPG 425
Score = 159 (61.0 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 277 GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
G+P + G + G ++ +P K GL+IGRGGE +K + ++GA +++
Sbjct: 403 GAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEIS 462
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVP-- 390
Q P GD + + V + G +QI+ A+++I+E + + P G A P P
Sbjct: 463 RQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA-GPMGPFN 520
Query: 391 TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNP---HYPH 426
GP GP G+ H P + YP +G YP P H P+
Sbjct: 521 PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPN 564
Score = 87 (35.7 bits), Expect = 8.1e-24, Sum P(3) = 8.1e-24
Identities = 43/152 (28%), Positives = 54/152 (35%)
Query: 558 SGYHQHQYGKPPYGMP----------AQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYG 607
+ Y+ H Y +PP +P AQG PQ Y ++ Q
Sbjct: 578 AAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKI-GQQPQQ 636
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P P QQ Y A ++ Y PP S P Y A A Y + Q
Sbjct: 637 PGAPPQQDYTKAW----EEYYKKQAQVATGGGPGAPPGSQPDY--SAAWA--EYYR---Q 685
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSN 699
QA YGQ P G Q TQQ +Q A+ N
Sbjct: 686 QAAYYGQT-PGPGGPQPPPTQQG--QQQASGN 714
Score = 86 (35.3 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 38/140 (27%), Positives = 46/140 (32%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ-GTQPQSYXXXXXXXXXXX 593
AP P G P Q + + Y K P Q G PQ
Sbjct: 598 APAAPPAQGEPPQPPPTGQSDYTKAWEE--YYKKIGQQPQQPGAPPQQ-----DYTKAWE 650
Query: 594 XXYQSQVPSAQSYGPNVP--HQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y+ Q A GP P Q Y A + +Q YG P P QPP + G
Sbjct: 651 EYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGG-PQPPPTQQGQQ 709
Query: 652 QQAGQAVPNYPQPGGQQAPS 671
Q +G P P P Q P+
Sbjct: 710 QASGNCHPP-PPPFSFQPPA 728
Score = 84 (34.6 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 57/213 (26%), Positives = 73/213 (34%)
Query: 543 GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQG---TQPQSYXXXXXXXXXXXXXYQSQ 599
G N P ++QG G H G PP+ P QG T PQ
Sbjct: 517 GPFNPGP-FNQG--PPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAATD- 572
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQAGQAV 658
P+A ++ H Q P GP P APA P + +PP P +A
Sbjct: 573 -PNA-AWAAYYSHYYQQP---PGPV----PGPAPAPAAPPAQGEPPQPPPTGQSDYTKAW 623
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY---QGTQ-DXXXXX 714
Y + GQQ G AP YT + Y ++ A G G G+Q D
Sbjct: 624 EEYYKKIGQQPQQPG--APPQQ--DYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAW 679
Query: 715 XXXXXXXXXXTGQ---PGYAQPAATQPSYDQSA 744
GQ PG QP TQ Q++
Sbjct: 680 AEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAS 712
Score = 81 (33.6 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 54/223 (24%), Positives = 69/223 (30%)
Query: 540 PYG-GHSNSQPVYSQGGLQSG-YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
P G G P G G ++Q G PP+ A G P Y +
Sbjct: 502 PVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPH---AGGPPPHQYPPQG---------WG 549
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
+ P Q P PH A + + +Y S Y QPP PG P A A
Sbjct: 550 NTYPQWQ---PPAPHDPNKAAAAATDPNAAWAAYYS----HYYQQPPGPVPG-PAPAPAA 601
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
P +P Q P GQ T + +Y P+QP G QD
Sbjct: 602 PPAQGEP--PQPPPTGQSDYTKAWEEYYKKIGQQPQQP-------GAPPQQDYTKAWEEY 652
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQS-----ASQSTAYGVAQG 755
G P +QP Y + Q+ YG G
Sbjct: 653 YKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 695
Score = 72 (30.4 bits), Expect = 8.1e-24, Sum P(3) = 8.1e-24
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNPHYPHLPYGNYPPQ 435
P P GP GP G P+ PM P +GP P PH P YPPQ
Sbjct: 499 PLCPVGP---GPGGPGPAGPMGPFNPGPFNQGP-PGAPPHAGGPPPHQYPPQ 546
Score = 63 (27.2 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 28/90 (31%), Positives = 32/90 (35%)
Query: 571 GMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS 630
G P G+QP Y Y Q P GP P QQ SG +P
Sbjct: 666 GAPP-GSQPD-YSAAWAEYYRQQAAYYGQTPGPG--GPQPPPTQQGQQQASG---NCHPP 718
Query: 631 YGSAPAPDSYNQPPASA-PGYPQQAGQAVP 659
P P S+ QPPA+ P AG P
Sbjct: 719 ----PPPFSF-QPPATVHPALVGSAGNPFP 743
Score = 41 (19.5 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 397 GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAP 439
GP G P P Q+ S N H P P+ PP + P
Sbjct: 695 GPGGPQP--PPTQQGQQQA---SGNCHPPPPPFSFQPPATVHP 732
>UNIPROTKB|F1MHR6 [details] [associations]
symbol:LOC505564 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0010494 "cytoplasmic stress granule" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
InterPro:IPR015096 Pfam:PF09005 OMA:QASGNCH
GeneTree:ENSGT00650000093048 EMBL:DAAA02019565 EMBL:DAAA02019566
IPI:IPI00701919 Ensembl:ENSBTAT00000027991 Uniprot:F1MHR6
Length = 708
Score = 254 (94.5 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 69/241 (28%), Positives = 117/241 (48%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 288 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 344
Query: 264 KLINAVIAEADAG-----GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRG 314
++IN ++ +G G P + G + G ++ +P K GL+IGRG
Sbjct: 345 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 404
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E + + P
Sbjct: 405 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPV 463
Query: 375 TLSGGFNQQAYRPRVP--TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNPHYPHL 427
G A P P GP GP G+ H P + YP +G YP P PH
Sbjct: 464 GPGPGGPGPA-GPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHD 522
Query: 428 P 428
P
Sbjct: 523 P 523
Score = 238 (88.8 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G +
Sbjct: 105 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPES 161
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETI
Sbjct: 162 VQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETI 217
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ LI + K +R+ GD +++ A EM+ ++L + + G
Sbjct: 218 KQLQERAGVKMILIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----G 270
Query: 379 GF-NQQAYRPRVPTGPPQWGPRGS 401
GF ++ Y R+ G PR S
Sbjct: 271 GFGDRNEYGSRIGGGIDVPVPRHS 294
Score = 218 (81.8 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 62/202 (30%), Positives = 102/202 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 197 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 255
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 256 ACEMVMDILRERDQGGFGDRNEYG---SRIGGG---IDVPVPRHSVGVVIGRSGEMIKKI 309
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSG 378
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P G
Sbjct: 310 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPDRCEHAARIINDLL-QSLRSGPPGPPGG 364
Query: 379 GFNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 365 PGMPPGGRGR-GRGQGNWGPPG 385
Score = 157 (60.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 47/164 (28%), Positives = 76/164 (46%)
Query: 277 GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
G P + G + G ++ +P K GL+IGRGGE +K + ++GA +++
Sbjct: 363 GGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEIS 422
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVP-- 390
Q P GD + + + + G +QI+ A+++I+E + + P G A P P
Sbjct: 423 RQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA-GPMGPFN 480
Query: 391 TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNP---HYPH 426
GP GP G+ H P + YP +G YP P H P+
Sbjct: 481 PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPN 524
Score = 86 (35.3 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 38/140 (27%), Positives = 46/140 (32%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ-GTQPQSYXXXXXXXXXXX 593
AP P G P Q + + Y K P Q G PQ
Sbjct: 558 APAAPPTQGEPPQPPPAGQSDYTKAWEE--YYKKIGQQPQQPGAPPQQ-----DYTKAWE 610
Query: 594 XXYQSQVPSAQSYGPNVP--HQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y+ Q A GP P Q Y A + +Q YG P P QPP + G
Sbjct: 611 EYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGG-PQPPPTQQGQQ 669
Query: 652 QQAGQAVPNYPQPGGQQAPS 671
Q +G P P P Q P+
Sbjct: 670 QASGNCHPP-PPPFSFQPPA 688
Score = 86 (35.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 57/213 (26%), Positives = 73/213 (34%)
Query: 543 GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQG---TQPQSYXXXXXXXXXXXXXYQSQ 599
G N P ++QG G H G PP+ P QG T PQ
Sbjct: 477 GPFNPGP-FNQG--PPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAAAD- 532
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQAGQAV 658
P+A ++ H Q P GP P APA P + +PP P +A
Sbjct: 533 -PNA-AWAAYYSHYYQQP---PGPV----PGPAPAPAAPPTQGEPPQPPPAGQSDYTKAW 583
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY---QGTQ-DXXXXX 714
Y + GQQ G AP YT + Y ++ A G G G+Q D
Sbjct: 584 EEYYKKIGQQPQQPG--APPQQ--DYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAW 639
Query: 715 XXXXXXXXXXTGQ---PGYAQPAATQPSYDQSA 744
GQ PG QP TQ Q++
Sbjct: 640 AEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAS 672
Score = 85 (35.0 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 54/223 (24%), Positives = 69/223 (30%)
Query: 540 PYG-GHSNSQPVYSQGGLQSG-YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
P G G P G G ++Q G PP+ A G P Y +
Sbjct: 462 PVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPH---AGGPPPHQYPPQG---------WG 509
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
+ P Q P PH A + + +Y S Y QPP PG P A A
Sbjct: 510 NTYPQWQ---PPAPHDPNKAAAAAADPNAAWAAYYS----HYYQQPPGPVPG-PAPAPAA 561
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
P +P Q P GQ T + +Y P+QP G QD
Sbjct: 562 PPTQGEP--PQPPPAGQSDYTKAWEEYYKKIGQQPQQP-------GAPPQQDYTKAWEEY 612
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQS-----ASQSTAYGVAQG 755
G P +QP Y + Q+ YG G
Sbjct: 613 YKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 655
Score = 83 (34.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 42/152 (27%), Positives = 53/152 (34%)
Query: 558 SGYHQHQYGKPPYGMPA----------QGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYG 607
+ Y+ H Y +PP +P QG PQ Y ++ Q
Sbjct: 538 AAYYSHYYQQPPGPVPGPAPAPAAPPTQGEPPQPPPAGQSDYTKAWEEYYKKI-GQQPQQ 596
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P P QQ Y A ++ Y PP S P Y A A Y + Q
Sbjct: 597 PGAPPQQDYTKAW----EEYYKKQAQVATGGGPGAPPGSQPDY--SAAWA--EYYR---Q 645
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSN 699
QA YGQ P G Q TQQ +Q A+ N
Sbjct: 646 QAAYYGQT-PGPGGPQPPPTQQG--QQQASGN 674
Score = 72 (30.4 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNPHYPHLPYGNYPPQ 435
P P GP GP G P+ PM P +GP P PH P YPPQ
Sbjct: 459 PLCPVGP---GPGGPGPAGPMGPFNPGPFNQGP-PGAPPHAGGPPPHQYPPQ 506
Score = 63 (27.2 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 28/90 (31%), Positives = 32/90 (35%)
Query: 571 GMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS 630
G P G+QP Y Y Q P GP P QQ SG +P
Sbjct: 626 GAPP-GSQPD-YSAAWAEYYRQQAAYYGQTPGPG--GPQPPPTQQGQQQASG---NCHPP 678
Query: 631 YGSAPAPDSYNQPPASA-PGYPQQAGQAVP 659
P P S+ QPPA+ P AG P
Sbjct: 679 ----PPPFSF-QPPATVHPALVGSAGNPFP 703
Score = 41 (19.5 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 397 GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAP 439
GP G P P Q+ S N H P P+ PP + P
Sbjct: 655 GPGGPQP--PPTQQGQQQA---SGNCHPPPPPFSFQPPATVHP 692
>UNIPROTKB|Q92945 [details] [associations]
symbol:KHSRP "Far upstream element-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005654 GO:GO:0006355 GO:GO:0003677
GO:GO:0006397 GO:GO:0006351 GO:GO:0003723 GO:GO:0051028
GO:GO:0000375 eggNOG:NOG300923 HOGENOM:HOG000231552
HOVERGEN:HBG000625 KO:K13210 InterPro:IPR015096 Pfam:PF09005
CTD:8570 EMBL:U94832 EMBL:AC011491 EMBL:AC011539 EMBL:BC085004
EMBL:AF093747 EMBL:AF093745 EMBL:AF093748 EMBL:U69126 EMBL:AB209662
IPI:IPI00479786 IPI:IPI00855957 RefSeq:NP_003676.2
UniGene:Hs.727344 PDB:2HH2 PDB:2HH3 PDB:2JVZ PDB:2OPU PDB:2OPV
PDB:4B8T PDBsum:2HH2 PDBsum:2HH3 PDBsum:2JVZ PDBsum:2OPU
PDBsum:2OPV PDBsum:4B8T ProteinModelPortal:Q92945 SMR:Q92945
DIP:DIP-48484N IntAct:Q92945 STRING:Q92945 PhosphoSite:Q92945
DMDM:160380711 REPRODUCTION-2DPAGE:Q92945 PaxDb:Q92945 PRIDE:Q92945
Ensembl:ENST00000398148 GeneID:8570 KEGG:hsa:8570 UCSC:uc002mer.4
GeneCards:GC19M006413 H-InvDB:HIX0040083 HGNC:HGNC:6316
HPA:HPA034739 MIM:603445 neXtProt:NX_Q92945 PharmGKB:PA30097
InParanoid:Q92945 OMA:QASGNCH PhylomeDB:Q92945 ChEMBL:CHEMBL1795105
ChiTaRS:KHSRP EvolutionaryTrace:Q92945 GenomeRNAi:8570
NextBio:32149 PMAP-CutDB:Q92945 ArrayExpress:Q92945 Bgee:Q92945
CleanEx:HS_KHSRP Genevestigator:Q92945 GermOnline:ENSG00000088247
Uniprot:Q92945
Length = 711
Score = 254 (94.5 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 69/241 (28%), Positives = 117/241 (48%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 383
Query: 264 KLINAVIAEADAG-----GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRG 314
++IN ++ +G G P + G + G ++ +P K GL+IGRG
Sbjct: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E + + P
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPV 502
Query: 375 TLSGGFNQQAYRPRVP--TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNPHYPHL 427
G A P P GP GP G+ H P + YP +G YP P PH
Sbjct: 503 GPGPGGPGPA-GPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHD 561
Query: 428 P 428
P
Sbjct: 562 P 562
Score = 238 (88.8 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G +
Sbjct: 144 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPES 200
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETI
Sbjct: 201 VQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETI 256
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ LI + K +R+ GD +++ A EM+ ++L + + G
Sbjct: 257 KQLQERAGVKMILIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----G 309
Query: 379 GF-NQQAYRPRVPTGPPQWGPRGS 401
GF ++ Y R+ G PR S
Sbjct: 310 GFGDRNEYGSRIGGGIDVPVPRHS 333
Score = 218 (81.8 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 62/202 (30%), Positives = 102/202 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 236 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 294
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 295 ACEMVMDILRERDQGGFGDRNEYG---SRIGGG---IDVPVPRHSVGVVIGRSGEMIKKI 348
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSG 378
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P G
Sbjct: 349 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPDRCEHAARIINDLL-QSLRSGPPGPPGG 403
Query: 379 GFNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 404 PGMPPGGRGR-GRGQGNWGPPG 424
Score = 86 (35.3 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 36/127 (28%), Positives = 45/127 (35%)
Query: 558 SGYHQHQYGKPPYGMP----------AQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYG 607
+ Y+ H Y +PP +P AQG PQ Y ++ Q
Sbjct: 577 AAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKI-GQQPQQ 635
Query: 608 PNVPHQQQYPYATSGP-TQQTYPSYGSAPAPDSYNQPPASAPG---YPQQAGQAVPNYPQ 663
P P QQ Y A +Q + G P +QP SA Y QQA P
Sbjct: 636 PGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAY-YGQTPG 694
Query: 664 PGGQQAP 670
PGG Q P
Sbjct: 695 PGGPQPP 701
Score = 83 (34.3 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 54/223 (24%), Positives = 69/223 (30%)
Query: 540 PYG-GHSNSQPVYSQGGLQSG-YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
P G G P G G ++Q G PP+ A G P Y +
Sbjct: 501 PVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPH---AGGPPPHQYPPQG---------WG 548
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
+ P Q P PH A + + +Y S Y QPP PG P A A
Sbjct: 549 NTYPQWQ---PPAPHDPSKAAAAAADPNAAWAAYYS----HYYQQPPGPVPG-PAPAPAA 600
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
P +P Q P GQ T + +Y P+QP G QD
Sbjct: 601 PPAQGEP--PQPPPTGQSDYTKAWEEYYKKIGQQPQQP-------GAPPQQDYTKAWEEY 651
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQS-----ASQSTAYGVAQG 755
G P +QP Y + Q+ YG G
Sbjct: 652 YKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 694
Score = 72 (30.4 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNPHYPHLPYGNYPPQ 435
P P GP GP G P+ PM P +GP P PH P YPPQ
Sbjct: 498 PLCPVGP---GPGGPGPAGPMGPFNPGPFNQGP-PGAPPHAGGPPPHQYPPQ 545
Score = 69 (29.3 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 34/123 (27%), Positives = 40/123 (32%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ-GTQPQSYXXXXXXXXXXX 593
AP P G P Q + + Y K P Q G PQ
Sbjct: 597 APAAPPAQGEPPQPPPTGQSDYTKAWEE--YYKKIGQQPQQPGAPPQQ-----DYTKAWE 649
Query: 594 XXYQSQVPSAQSYGPNVP--HQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y+ Q A GP P Q Y A + +Q YG P P QPP + G
Sbjct: 650 EYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGG-PQPPPTQQGQ- 707
Query: 652 QQA 654
QQA
Sbjct: 708 QQA 710
Score = 61 (26.5 bits), Expect = 7.8e-21, Sum P(3) = 7.8e-21
Identities = 19/58 (32%), Positives = 23/58 (39%)
Query: 394 PQWGPRGSH-PSQPMAYDYPQRGPYPSQNPHYPHLPYGNYP---PQQMAPRSNYGGPP 447
PQW P H PS+ A + + HY P G P P AP + G PP
Sbjct: 552 PQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQ-GEPP 608
>ZFIN|ZDB-GENE-040426-2159 [details] [associations]
symbol:fubp1 "far upstream element (FUSE) binding
protein 1" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-2159 GO:GO:0003723 CTD:8880 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210 OrthoDB:EOG4STS4G
InterPro:IPR015096 Pfam:PF09005 GeneTree:ENSGT00650000093048
OMA:NGQEGDQ EMBL:CT027589 EMBL:BC064649 IPI:IPI00484709
RefSeq:NP_998309.1 UniGene:Dr.76240 SMR:Q6P2A9
Ensembl:ENSDART00000081442 Ensembl:ENSDART00000128153 GeneID:406418
KEGG:dre:406418 InParanoid:Q6P2A9 NextBio:20818020 Uniprot:Q6P2A9
Length = 642
Score = 275 (101.9 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 83/250 (33%), Positives = 118/250 (47%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG++G+ I+ +Q ++G +IQ D + P R +I+G
Sbjct: 269 SLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFKPDDGSTPE---RIAQIMGPPDRAQ 325
Query: 261 KAEKLINAVIAEADAGGSPSLVA--------RGLATAQAS------GAAEQVEIKVPNEK 306
A +I ++ AGG P RG Q + G ++ VP K
Sbjct: 326 HAADIITDLLRSVQAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMK 385
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
GLIIG+GGETIK + +SGARI+L P D + +I V G +QI+ A+++++E
Sbjct: 386 TGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNI-KIFTVRGSPQQIDYARQLVEEK 444
Query: 367 LSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSH-PSQPMAYDYPQRGPYPSQNPHYP 425
+ V P GG + P P G P GP G P PM P GPY Q P P
Sbjct: 445 IGGPVSPM---GG----PHGPPGPHGGPSHGPPGPQGPPAPMGPYNP--GPY-GQGPPGP 494
Query: 426 HLPYGNYPPQ 435
H P Y PQ
Sbjct: 495 HGPPAPYQPQ 504
Score = 222 (83.2 bits), Expect = 6.6e-21, Sum P(3) = 6.6e-21
Identities = 57/170 (33%), Positives = 99/170 (58%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++S + +VP+ VG +IG+ G+ I LQ SG KIQI D+ P R V + G+
Sbjct: 89 SVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPD---RSVTLTGSPDA 145
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV-EIKVPNEKVGLIIGRGGET 317
I A++L++ ++ + G PS A G V E+ +P K GL+IG+GGET
Sbjct: 146 IMTAKRLLSEIVEK----GRPSP-----AFHHNDGPGMSVHEMMIPASKAGLVIGKGGET 196
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R++GD +++ A++M+ +++
Sbjct: 197 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRISGDPFKVQQAKDMVMDLI 244
Score = 209 (78.6 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 62/201 (30%), Positives = 96/201 (47%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +A+ +
Sbjct: 181 IPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRISGDPFKVQQAKDM 239
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+ +I D G G G E +++ VP VG++IGR GE IK +Q +
Sbjct: 240 VMDLIR--DQGFREQRGEYGSRAGGGGGGGESLDVPVPRFAVGIVIGRSGEMIKKIQNDT 297
Query: 326 GARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSGGFN 381
G RIQ P DGS ERI ++ G + + A ++I ++L P GG
Sbjct: 298 GVRIQFKPD-----DGSTPERIAQIMGPPDRAQHAADIITDLLRSVQAGGPPGHGGGGGG 352
Query: 382 QQAYRPRVPTGPPQW--GPRG 400
R R G W GP G
Sbjct: 353 GGGGRGR-GRGQGNWNMGPPG 372
Score = 133 (51.9 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I LQ SG +IQ+ P + G +R V +TG I
Sbjct: 93 EFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAP----DSGGMPDRSVTLTGSPDAIMT 148
Query: 359 AQEMIKEVLSQTVRPS 374
A+ ++ E++ + RPS
Sbjct: 149 AKRLLSEIVEKG-RPS 163
Score = 81 (33.6 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 42/148 (28%), Positives = 53/148 (35%)
Query: 565 YGKP-PYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQ-----YPY 618
+G P P+G P+ G P Y P +GP P+Q Q YP+
Sbjct: 456 HGPPGPHGGPSHGP-PGPQGPPAPMGPYNPGPYGQGPPGP--HGPPAPYQPQGWGNGYPH 512
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA-GQAVPNYPQPGGQQAPSYGQVAP 677
G T S A A + A Y QQ G P PG QA GQ P
Sbjct: 513 WQQGQPDPTVCSPDKAAADANAAAWAAYYSQYQQQPQGPMTPTSAAPGTTQANGQGQGQP 572
Query: 678 ----TAGYGQYTNTQ-QAYPEQPATSNA 700
T + +Y Q QA P+ A + A
Sbjct: 573 QQDYTKAWEEYYKKQGQAAPQAAAAATA 600
Score = 74 (31.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 51/172 (29%), Positives = 55/172 (31%)
Query: 533 NHAPV-QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXX 591
N P Q P G H P Y G +GY Q G+P P P
Sbjct: 483 NPGPYGQGPPGPHGPPAP-YQPQGWGNGYPHWQQGQPD---PTV-CSPDK--AAADANAA 535
Query: 592 XXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQ-QTYPSYGSAPAPDSYNQPPASAPGY 650
Y SQ Q GP P P T Q Q P A + Y + A
Sbjct: 536 AWAAYYSQYQQ-QPQGPMTPTSAA-PGTTQANGQGQGQPQQDYTKAWEEYYKKQGQAA-- 591
Query: 651 PQQAGQAVPNYPQPGGQ-------------QAPSYGQVAPTAGYGQYTNTQQ 689
PQ A A QPGGQ QA YGQ AP A G QQ
Sbjct: 592 PQAAAAATAT--QPGGQPDYSAAWAEYYRQQAAYYGQGAPQA-MGGAPQAQQ 640
Score = 72 (30.4 bits), Expect = 6.6e-21, Sum P(3) = 6.6e-21
Identities = 21/57 (36%), Positives = 23/57 (40%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNY 443
P P G P GP G H PQ P P P+ P PYG PP P + Y
Sbjct: 448 PVSPMGGPH-GPPGPHGGPSHGPPGPQGPPAP-MGPYNPG-PYGQGPPGPHGPPAPY 501
Score = 68 (29.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 26/79 (32%), Positives = 32/79 (40%)
Query: 370 TVRPSTLSGGFNQQAYRPRVPTGP--PQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL 427
TVR S + +Q ++ GP P GP G P P + P GP Q P P
Sbjct: 426 TVRGSPQQIDYARQLVEEKIG-GPVSPMGGPHG--PPGP--HGGPSHGPPGPQGPPAPMG 480
Query: 428 PYGNYPPQQMAPRSNYGGP 446
PY N P P +G P
Sbjct: 481 PY-NPGPYGQGPPGPHGPP 498
Score = 67 (28.6 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 45/168 (26%), Positives = 56/168 (33%)
Query: 617 PYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY-PQQAGQAVPN-YPQPGGQQAPSYGQ 674
P+ GP PS+G P P PPA Y P GQ P + P Q +G
Sbjct: 455 PHGPPGP--HGGPSHGP-PGPQG---PPAPMGPYNPGPYGQGPPGPHGPPAPYQPQGWGN 508
Query: 675 VAPTAGYGQYTNT----QQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGY 730
P GQ T +A + A + A Y Y Q T G
Sbjct: 509 GYPHWQQGQPDPTVCSPDKAAADANAAAWAAY-YSQYQQQPQGPMTPTSAAPGTTQANGQ 567
Query: 731 AQPAATQPSYDQSASQSTAYGVAQGTAA--AGYGKTVSPQPGYPQYDS 776
Q QP D + + Y QG AA A T + G P Y +
Sbjct: 568 GQG---QPQQDYTKAWEEYYK-KQGQAAPQAAAAATATQPGGQPDYSA 611
Score = 51 (23.0 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 38/142 (26%), Positives = 44/142 (30%)
Query: 644 PASAP-GYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPE--QPATSNA 700
P P G P G P P G AP G P YGQ P QP
Sbjct: 451 PMGGPHGPPGPHGGPSHGPPGPQGPPAPM-GPYNP-GPYGQGPPGPHGPPAPYQPQGWGN 508
Query: 701 GYGY--QGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAA 758
GY + QG D Y QP + + S A G Q A
Sbjct: 509 GYPHWQQGQPDPTVCSPDKAAADANAAAWAAYYSQYQQQPQGPMTPT-SAAPGTTQ---A 564
Query: 759 AGYGKTVSPQPGYPQYDSTQMY 780
G G+ G PQ D T+ +
Sbjct: 565 NGQGQ------GQPQQDYTKAW 580
>UNIPROTKB|F1SBT6 [details] [associations]
symbol:KHSRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010494 "cytoplasmic stress granule" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
InterPro:IPR015096 Pfam:PF09005 OMA:QASGNCH
GeneTree:ENSGT00650000093048 EMBL:CU929921
Ensembl:ENSSSCT00000014785 Uniprot:F1SBT6
Length = 747
Score = 254 (94.5 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 69/241 (28%), Positives = 117/241 (48%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 383
Query: 264 KLINAVIAEADAG-----GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRG 314
++IN ++ +G G P + G + G ++ +P K GL+IGRG
Sbjct: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E + + P
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPV 502
Query: 375 TLSGGFNQQAYRPRVP--TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNPHYPHL 427
G A P P GP GP G+ H P + YP +G YP P PH
Sbjct: 503 GPGPGGPGPA-GPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHD 561
Query: 428 P 428
P
Sbjct: 562 P 562
Score = 238 (88.8 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G +
Sbjct: 144 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPES 200
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETI
Sbjct: 201 VQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETI 256
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ LI + K +R+ GD +++ A EM+ ++L + + G
Sbjct: 257 KQLQERAGVKMILIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----G 309
Query: 379 GF-NQQAYRPRVPTGPPQWGPRGS 401
GF ++ Y R+ G PR S
Sbjct: 310 GFGDRNEYGSRIGGGIDVPVPRHS 333
Score = 218 (81.8 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 62/202 (30%), Positives = 102/202 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 236 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 294
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 295 ACEMVMDILRERDQGGFGDRNEYG---SRIGGG---IDVPVPRHSVGVVIGRSGEMIKKI 348
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---PSTLSG 378
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P G
Sbjct: 349 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPDRCEHAARIINDLL-QSLRSGPPGPPGG 403
Query: 379 GFNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 404 PGMPPGGRGR-GRGQGNWGPPG 424
Score = 157 (60.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 47/164 (28%), Positives = 76/164 (46%)
Query: 277 GSPSLVARGLATAQASG----AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
G P + G + G ++ +P K GL+IGRGGE +K + ++GA +++
Sbjct: 402 GGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEIS 461
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVP-- 390
Q P GD + + + + G +QI+ A+++I+E + + P G A P P
Sbjct: 462 RQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPA-GPMGPFN 519
Query: 391 TGPPQWGPRGS--HPSQPMAYDYPQRG---PYPSQNP---HYPH 426
GP GP G+ H P + YP +G YP P H P+
Sbjct: 520 PGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPN 563
Score = 86 (35.3 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 38/140 (27%), Positives = 46/140 (32%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ-GTQPQSYXXXXXXXXXXX 593
AP P G P Q + + Y K P Q G PQ
Sbjct: 597 APAAPPTQGEPPQPPPAGQSDYTKAWEE--YYKKIGQQPQQPGAPPQQ-----DYTKAWE 649
Query: 594 XXYQSQVPSAQSYGPNVP--HQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y+ Q A GP P Q Y A + +Q YG P P QPP + G
Sbjct: 650 EYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGG-PQPPPTQQGQQ 708
Query: 652 QQAGQAVPNYPQPGGQQAPS 671
Q +G P P P Q P+
Sbjct: 709 QASGNCHPP-PPPFSFQPPA 727
Score = 86 (35.3 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 57/213 (26%), Positives = 73/213 (34%)
Query: 543 GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQG---TQPQSYXXXXXXXXXXXXXYQSQ 599
G N P ++QG G H G PP+ P QG T PQ
Sbjct: 516 GPFNPGP-FNQG--PPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAAAD- 571
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQAGQAV 658
P+A ++ H Q P GP P APA P + +PP P +A
Sbjct: 572 -PNA-AWAAYYSHYYQQP---PGPV----PGPAPAPAAPPTQGEPPQPPPAGQSDYTKAW 622
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY---QGTQ-DXXXXX 714
Y + GQQ G AP YT + Y ++ A G G G+Q D
Sbjct: 623 EEYYKKIGQQPQQPG--APPQQ--DYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAW 678
Query: 715 XXXXXXXXXXTGQ---PGYAQPAATQPSYDQSA 744
GQ PG QP TQ Q++
Sbjct: 679 AEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQAS 711
Score = 85 (35.0 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 54/223 (24%), Positives = 69/223 (30%)
Query: 540 PYG-GHSNSQPVYSQGGLQSG-YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
P G G P G G ++Q G PP+ A G P Y +
Sbjct: 501 PVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPH---AGGPPPHQYPPQG---------WG 548
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
+ P Q P PH A + + +Y S Y QPP PG P A A
Sbjct: 549 NTYPQWQ---PPAPHDPNKAAAAAADPNAAWAAYYS----HYYQQPPGPVPG-PAPAPAA 600
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
P +P Q P GQ T + +Y P+QP G QD
Sbjct: 601 PPTQGEP--PQPPPAGQSDYTKAWEEYYKKIGQQPQQP-------GAPPQQDYTKAWEEY 651
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQS-----ASQSTAYGVAQG 755
G P +QP Y + Q+ YG G
Sbjct: 652 YKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPG 694
Score = 83 (34.3 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 42/152 (27%), Positives = 53/152 (34%)
Query: 558 SGYHQHQYGKPPYGMPA----------QGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYG 607
+ Y+ H Y +PP +P QG PQ Y ++ Q
Sbjct: 577 AAYYSHYYQQPPGPVPGPAPAPAAPPTQGEPPQPPPAGQSDYTKAWEEYYKKI-GQQPQQ 635
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P P QQ Y A ++ Y PP S P Y A A Y + Q
Sbjct: 636 PGAPPQQDYTKAW----EEYYKKQAQVATGGGPGAPPGSQPDY--SAAWA--EYYR---Q 684
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSN 699
QA YGQ P G Q TQQ +Q A+ N
Sbjct: 685 QAAYYGQT-PGPGGPQPPPTQQG--QQQASGN 713
Score = 72 (30.4 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 21/52 (40%), Positives = 23/52 (44%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNPHYPHLPYGNYPPQ 435
P P GP GP G P+ PM P +GP P PH P YPPQ
Sbjct: 498 PLCPVGP---GPGGPGPAGPMGPFNPGPFNQGP-PGAPPHAGGPPPHQYPPQ 545
Score = 63 (27.2 bits), Expect = 3.1e-21, Sum P(3) = 3.1e-21
Identities = 28/90 (31%), Positives = 32/90 (35%)
Query: 571 GMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS 630
G P G+QP Y Y Q P GP P QQ SG +P
Sbjct: 665 GAPP-GSQPD-YSAAWAEYYRQQAAYYGQTPGPG--GPQPPPTQQGQQQASG---NCHPP 717
Query: 631 YGSAPAPDSYNQPPASA-PGYPQQAGQAVP 659
P P S+ QPPA+ P AG P
Sbjct: 718 ----PPPFSF-QPPATVHPALVGSAGNPFP 742
Score = 41 (19.5 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 397 GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAP 439
GP G P P Q+ S N H P P+ PP + P
Sbjct: 694 GPGGPQP--PPTQQGQQQA---SGNCHPPPPPFSFQPPATVHP 731
>MGI|MGI:1196294 [details] [associations]
symbol:Fubp1 "far upstream element (FUSE) binding protein 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:1196294 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003723
eggNOG:NOG300923 HOGENOM:HOG000231552 HOVERGEN:HBG000625
InterPro:IPR015096 Pfam:PF09005 EMBL:BC014763 EMBL:AK029458
IPI:IPI00467635 IPI:IPI00874931 UniGene:Mm.278922 PDB:1X4M PDB:1X4N
PDBsum:1X4M PDBsum:1X4N ProteinModelPortal:Q91WJ8 SMR:Q91WJ8
IntAct:Q91WJ8 STRING:Q91WJ8 PhosphoSite:Q91WJ8
REPRODUCTION-2DPAGE:Q91WJ8 PaxDb:Q91WJ8 PRIDE:Q91WJ8
UCSC:uc008rsv.1 InParanoid:Q91WJ8 EvolutionaryTrace:Q91WJ8
CleanEx:MM_FUBP1 Genevestigator:Q91WJ8
GermOnline:ENSMUSG00000028034 Uniprot:Q91WJ8
Length = 651
Score = 275 (101.9 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 276 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 332
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 333 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 392
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 393 ETIKSISQQSGARIELQRSPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 451
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 452 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 508
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 509 AYPHWQQQAPPDPAKAGADPN 529
Score = 248 (92.4 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 97 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 153
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 154 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 205
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 206 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 251
Score = 208 (78.3 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 184 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 242
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 243 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 297
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 298 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 339
Score = 126 (49.4 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 91 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 146
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 147 TGTPESVQSAKRLLDQIVEKG-RPA 170
Score = 82 (33.9 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 35/103 (33%), Positives = 43/103 (41%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAP-G----Y-PQQAGQAVPN 660
P+ PH P+ GP P PAP YN PP AP G Y PQ G A P+
Sbjct: 455 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGPPGPAPHGPPAPYAPQGWGNAYPH 512
Query: 661 YPQ---PGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNA 700
+ Q P +A + A A Y + QQA P A + A
Sbjct: 513 WQQQAPPDPAKAGADPNSAAWAAYYAHYYQQQAQPPPAAPAGA 555
Score = 81 (33.6 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 41/144 (28%), Positives = 48/144 (33%)
Query: 622 GPTQQTYPSYGSAP--APDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTA 679
GP P P P + P PG P P P P G AP +G AP A
Sbjct: 445 GPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGP-AP-HGPPAPYA 502
Query: 680 --GYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAAT 736
G+G Y + QQ P PA + G QP A PA
Sbjct: 503 PQGWGNAYPHWQQQAPPDPAKA-------GADPNSAAWAAYYAHYYQQQAQPPPAAPAGA 555
Query: 737 QPSYDQSASQSTAYGVAQGTAAAG 760
P+ Q+ Q G Q A AG
Sbjct: 556 -PATTQTNGQ----GDQQAPAPAG 574
Score = 73 (30.8 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 34/105 (32%), Positives = 44/105 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
Q +G PH QQQ P A +G P + +Y + PPA+ G P A
Sbjct: 504 QGWGNAYPHWQQQAPPDPAKAGADPNSAAWAAYYAHYYQQQAQPPPAAPAGAP-----AT 558
Query: 659 PNYPQPGGQQAPS-YGQVAPTAGYGQYTNTQ-QAYPEQPATSNAG 701
G QQAP+ GQV T + +Y QA P PA + G
Sbjct: 559 TQTNGQGDQQAPAPAGQVDYTKAWEEYYKKMGQAVPA-PAGAPPG 602
Score = 63 (27.2 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 473 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGADPNSA 531
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 532 AWAAYYAHYYQQQAQP 547
Score = 42 (19.8 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 14/46 (30%), Positives = 17/46 (36%)
Query: 626 QTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS 671
Q P+ AP + A A Y QQA PQ Q P+
Sbjct: 591 QAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPA 636
Score = 37 (18.1 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
PP P G+ + Q+ P P+ Y Y A + G PP
Sbjct: 547 PPPAAPAGAPATTQTNGQGDQQAPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPP 601
>UNIPROTKB|F1MX51 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GO:GO:0010628 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:DAAA02008247
EMBL:DAAA02008246 IPI:IPI00698543 Ensembl:ENSBTAT00000011751
Uniprot:F1MX51
Length = 602
Score = 273 (101.2 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 237 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 293
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 294 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 353
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 354 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 412
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 413 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 469
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 470 AYPHWQQQAPPDPAKTGTDPN 490
Score = 205 (77.2 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 56/168 (33%), Positives = 93/168 (55%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 61 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 117
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ I E G P A G G EI +P K GL+ G+GGETI
Sbjct: 118 QSAKRLLD--IVEK---GRP---APGFH--HGDGPKCSSEIMIPASKAGLV-GKGGETIN 166
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 167 NSEERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 212
Score = 190 (71.9 bits), Expect = 8.8e-14, Sum P(3) = 8.8e-14
Identities = 52/168 (30%), Positives = 92/168 (54%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I +P +K G L+GK G+TI + +G K+ + +D + A +P+ I G +
Sbjct: 145 SSEIMIPASKAG-LVGKGGETINNSEERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQ 202
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK
Sbjct: 203 QAKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKK 257
Query: 321 LQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
+Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 258 IQNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 300
Score = 84 (34.6 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 49/171 (28%), Positives = 58/171 (33%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P+ PH P+ GP P PAP YN P PG P G P PQ G
Sbjct: 416 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGP---PG-PAPHGPPAPYAPQGWGN 469
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
P + Q AP T+ A A A Y YQ GQ
Sbjct: 470 AYPHWQQQAPPDPAKTGTDPNSA---AWAAYYAHY-YQQQAQPPPAAPAGAPTTTQTNGQ 525
Query: 728 PGYAQ-PA-ATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
G Q PA A Q Y ++ + Y G A T +P G P Y +
Sbjct: 526 EGDQQNPAPAGQVDYTKAWEE---YYKKMGQAVPA--PTGAPPGGQPDYSA 571
Score = 68 (29.0 bits), Expect = 5.6e-23, Sum P(2) = 5.6e-23
Identities = 30/96 (31%), Positives = 39/96 (40%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
Q +G PH QQQ P A +G P + +Y + PPA+ G P
Sbjct: 465 QGWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPT----TT 520
Query: 659 PNYPQPGGQQAPS-YGQVAPTAGYGQYTNTQ-QAYP 692
Q G QQ P+ GQV T + +Y QA P
Sbjct: 521 QTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVP 556
Score = 65 (27.9 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 434 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKTGTDPNSA 492
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 493 AWAAYYAHYYQQQAQP 508
Score = 45 (20.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 31/115 (26%), Positives = 43/115 (37%)
Query: 560 YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYA 619
Y+Q Q +PP PA G P + QV +++ Q A
Sbjct: 501 YYQQQ-AQPPPAAPA-GA-PTTTQTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPA 557
Query: 620 TSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQ 674
+G P Y +A A + Y Q A Y Q + Q +P +P P AP GQ
Sbjct: 558 PTGAPPGGQPDYSAAWA-EYYRQQAAY---YAQTSPQGMPQHP-P----APQ-GQ 602
>UNIPROTKB|Q96AE4 [details] [associations]
symbol:FUBP1 "Far upstream element-binding protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010628 "positive
regulation of gene expression" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0003700 GO:GO:0003723
GO:GO:0006366 GO:GO:0003697 GO:GO:0010628 EMBL:U05040 EMBL:AC096948
EMBL:BC017247 IPI:IPI00375441 IPI:IPI00853059 PIR:A53184
RefSeq:NP_003893.2 UniGene:Hs.567380 PDB:1J4W PDB:2KXH PDBsum:1J4W
PDBsum:2KXH ProteinModelPortal:Q96AE4 SMR:Q96AE4 DIP:DIP-47273N
IntAct:Q96AE4 MINT:MINT-1374324 STRING:Q96AE4 PhosphoSite:Q96AE4
DMDM:116241370 REPRODUCTION-2DPAGE:IPI00375441 PaxDb:Q96AE4
PRIDE:Q96AE4 DNASU:8880 Ensembl:ENST00000294623
Ensembl:ENST00000370768 GeneID:8880 KEGG:hsa:8880 UCSC:uc001dii.3
CTD:8880 GeneCards:GC01M078400 HGNC:HGNC:4004 HPA:HPA006149
MIM:603444 neXtProt:NX_Q96AE4 PharmGKB:PA28420 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210 OrthoDB:EOG4STS4G
ChiTaRS:FUBP1 EvolutionaryTrace:Q96AE4 GenomeRNAi:8880
NextBio:33343 ArrayExpress:Q96AE4 Bgee:Q96AE4 CleanEx:HS_FUBP1
Genevestigator:Q96AE4 GermOnline:ENSG00000162613 InterPro:IPR015096
Pfam:PF09005 Uniprot:Q96AE4
Length = 644
Score = 274 (101.5 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 512
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 513 AYPHWQQQAPPDPAKAGTDPN 533
Score = 248 (92.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 101 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 157
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 158 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 209
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 210 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 211 (79.3 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 54/167 (32%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 246
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 247 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 301
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ ERI ++TG + + A E+I ++L
Sbjct: 302 QNDAGVRIQFKPD-----DGTTPERIAQITGPPDRCQHAAEIITDLL 343
Score = 126 (49.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 95 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 150
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 151 TGTPESVQSAKRLLDQIVEKG-RPA 174
Score = 82 (33.9 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 47/170 (27%), Positives = 56/170 (32%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P+ PH P+ GP P PAP YN P PG P G P PQ G
Sbjct: 459 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGP---PG-PAPHGPPAPYAPQGWGN 512
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
P + Q AP T+ A A A Y YQ GQ
Sbjct: 513 AYPHWQQQAPPDPAKAGTDPNSA---AWAAYYAHY-YQQQAQPPPAAPAGAPTTTQTNGQ 568
Query: 728 PGYAQPA-ATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
PA A Q Y ++ + Y G A T +P G P Y +
Sbjct: 569 GDQQNPAPAGQVDYTKAWEE---YYKKMGQAVPA--PTGAPPGGQPDYSA 613
Score = 67 (28.6 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 24/72 (33%), Positives = 30/72 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYP---QQAG 655
Q +G PH QQQ P A +G P + +Y + PPA+ G P Q G
Sbjct: 508 QGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNG 567
Query: 656 QAVPNYPQPGGQ 667
Q P P GQ
Sbjct: 568 QGDQQNPAPAGQ 579
Score = 63 (27.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 477 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA 535
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 536 AWAAYYAHYYQQQAQP 551
Score = 37 (18.1 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
PP P G+ + Q+ P P+ Y Y A + G PP
Sbjct: 551 PPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPP 605
>UNIPROTKB|F1S9S5 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 EMBL:CU695021
Ensembl:ENSSSCT00000004173 Uniprot:F1S9S5
Length = 645
Score = 273 (101.2 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 512
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 513 AYPHWQQQAPPDPAKTGTDPN 533
Score = 248 (92.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 101 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 157
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 158 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 209
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 210 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 208 (78.3 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 246
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 247 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 301
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 302 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 343
Score = 126 (49.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 95 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 150
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 151 TGTPESVQSAKRLLDQIVEKG-RPA 174
Score = 84 (34.6 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 49/171 (28%), Positives = 58/171 (33%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P+ PH P+ GP P PAP YN P PG P G P PQ G
Sbjct: 459 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGP---PG-PAPHGPPAPYAPQGWGN 512
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
P + Q AP T+ A A A Y YQ GQ
Sbjct: 513 AYPHWQQQAPPDPAKTGTDPNSA---AWAAYYAHY-YQQQAQPPPAAPAGAPTTTQTNGQ 568
Query: 728 PGYAQ-PA-ATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
G Q PA A Q Y ++ + Y G A T +P G P Y +
Sbjct: 569 EGDQQNPAPAGQVDYTKAWEE---YYKKMGQAVPA--PTGAPPGGQPDYSA 614
Score = 68 (29.0 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 30/96 (31%), Positives = 39/96 (40%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
Q +G PH QQQ P A +G P + +Y + PPA+ G P
Sbjct: 508 QGWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPT----TT 563
Query: 659 PNYPQPGGQQAPS-YGQVAPTAGYGQYTNTQ-QAYP 692
Q G QQ P+ GQV T + +Y QA P
Sbjct: 564 QTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVP 599
Score = 65 (27.9 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 477 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKTGTDPNSA 535
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 536 AWAAYYAHYYQQQAQP 551
Score = 45 (20.9 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 31/115 (26%), Positives = 43/115 (37%)
Query: 560 YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYA 619
Y+Q Q +PP PA G P + QV +++ Q A
Sbjct: 544 YYQQQ-AQPPPAAPA-GA-PTTTQTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPA 600
Query: 620 TSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQ 674
+G P Y +A A + Y Q A Y Q + Q +P +P P AP GQ
Sbjct: 601 PTGAPPGGQPDYSAAWA-EYYRQQAAY---YAQTSPQGMPQHP-P----APQ-GQ 645
>UNIPROTKB|E9PEB5 [details] [associations]
symbol:FUBP1 "Far upstream element-binding protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
EMBL:AC096948 HGNC:HGNC:4004 ChiTaRS:FUBP1 InterPro:IPR015096
Pfam:PF09005 IPI:IPI00644386 ProteinModelPortal:E9PEB5 SMR:E9PEB5
PRIDE:E9PEB5 Ensembl:ENST00000370767 ArrayExpress:E9PEB5
Bgee:E9PEB5 Uniprot:E9PEB5
Length = 655
Score = 274 (101.5 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 512
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 513 AYPHWQQQAPPDPAKAGTDPN 533
Score = 248 (92.4 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 101 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 157
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 158 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 209
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 210 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 211 (79.3 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 54/167 (32%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 246
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 247 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 301
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ ERI ++TG + + A E+I ++L
Sbjct: 302 QNDAGVRIQFKPD-----DGTTPERIAQITGPPDRCQHAAEIITDLL 343
Score = 126 (49.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 95 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 150
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 151 TGTPESVQSAKRLLDQIVEKG-RPA 174
Score = 82 (33.9 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 47/170 (27%), Positives = 56/170 (32%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P+ PH P+ GP P PAP YN P PG P G P PQ G
Sbjct: 459 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGP---PG-PAPHGPPAPYAPQGWGN 512
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
P + Q AP T+ A A A Y YQ GQ
Sbjct: 513 AYPHWQQQAPPDPAKAGTDPNSA---AWAAYYAHY-YQQQAQPPPAAPAGAPTTTQTNGQ 568
Query: 728 PGYAQPA-ATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
PA A Q Y ++ + Y G A T +P G P Y +
Sbjct: 569 GDQQNPAPAGQVDYTKAWEE---YYKKMGQAVPA--PTGAPPGGQPDYSA 613
Score = 67 (28.6 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
Identities = 24/72 (33%), Positives = 30/72 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYP---QQAG 655
Q +G PH QQQ P A +G P + +Y + PPA+ G P Q G
Sbjct: 508 QGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNG 567
Query: 656 QAVPNYPQPGGQ 667
Q P P GQ
Sbjct: 568 QGDQQNPAPAGQ 579
Score = 63 (27.2 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 477 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA 535
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 536 AWAAYYAHYYQQQAQP 551
Score = 37 (18.1 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
PP P G+ + Q+ P P+ Y Y A + G PP
Sbjct: 551 PPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPP 605
>UNIPROTKB|B4DT31 [details] [associations]
symbol:FUBP1 "cDNA FLJ53425, highly similar to Far upstream
element-binding protein 1" species:9606 "Homo sapiens" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0003723 EMBL:AC096948 UniGene:Hs.567380
HGNC:HGNC:4004 HOGENOM:HOG000231552 HOVERGEN:HBG000625
ChiTaRS:FUBP1 InterPro:IPR015096 Pfam:PF09005 EMBL:AK300032
IPI:IPI00641948 SMR:B4DT31 STRING:B4DT31 Ensembl:ENST00000436586
UCSC:uc010orm.2 OMA:NGQEGDQ Uniprot:B4DT31
Length = 665
Score = 274 (101.5 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 301 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 357
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 358 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 417
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 418 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 476
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 477 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 533
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 534 AYPHWQQQAPPDPAKAGTDPN 554
Score = 248 (92.4 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 122 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 178
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 179 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 230
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 231 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 276
Score = 211 (79.3 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 54/167 (32%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 209 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 267
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 268 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 322
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ ERI ++TG + + A E+I ++L
Sbjct: 323 QNDAGVRIQFKPD-----DGTTPERIAQITGPPDRCQHAAEIITDLL 364
Score = 126 (49.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 116 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 171
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 172 TGTPESVQSAKRLLDQIVEKG-RPA 195
Score = 82 (33.9 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 47/170 (27%), Positives = 56/170 (32%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P+ PH P+ GP P PAP YN P PG P G P PQ G
Sbjct: 480 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGP---PG-PAPHGPPAPYAPQGWGN 533
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
P + Q AP T+ A A A Y YQ GQ
Sbjct: 534 AYPHWQQQAPPDPAKAGTDPNSA---AWAAYYAHY-YQQQAQPPPAAPAGAPTTTQTNGQ 589
Query: 728 PGYAQPA-ATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
PA A Q Y ++ + Y G A T +P G P Y +
Sbjct: 590 GDQQNPAPAGQVDYTKAWEE---YYKKMGQAVPA--PTGAPPGGQPDYSA 634
Score = 67 (28.6 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 24/72 (33%), Positives = 30/72 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYP---QQAG 655
Q +G PH QQQ P A +G P + +Y + PPA+ G P Q G
Sbjct: 529 QGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNG 588
Query: 656 QAVPNYPQPGGQ 667
Q P P GQ
Sbjct: 589 QGDQQNPAPAGQ 600
Score = 63 (27.2 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 498 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA 556
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 557 AWAAYYAHYYQQQAQP 572
Score = 37 (18.1 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
PP P G+ + Q+ P P+ Y Y A + G PP
Sbjct: 572 PPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPP 626
>UNIPROTKB|E2RJQ2 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:AAEX03004886
Ensembl:ENSCAFT00000032426 Uniprot:E2RJQ2
Length = 668
Score = 273 (101.2 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 303 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 359
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 360 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 419
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 420 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 478
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 479 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 535
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 536 AYPHWQQQAPPDPAKAGTDPN 556
Score = 248 (92.4 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 124 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 180
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 181 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 232
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 233 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 278
Score = 208 (78.3 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 211 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 269
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 270 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 324
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 325 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 366
Score = 126 (49.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 118 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 173
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 174 TGTPESVQSAKRLLDQIVEKG-RPA 197
Score = 84 (34.6 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 49/171 (28%), Positives = 58/171 (33%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P+ PH P+ GP P PAP YN P PG P G P PQ G
Sbjct: 482 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGP---PG-PAPHGPPAPYAPQGWGN 535
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
P + Q AP T+ A A A Y YQ GQ
Sbjct: 536 AYPHWQQQAPPDPAKAGTDPNSA---AWAAYYAHY-YQQQAQPPPAAPAGAPTTTQTNGQ 591
Query: 728 PGYAQ-PA-ATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
G Q PA A Q Y ++ + Y G A T +P G P Y +
Sbjct: 592 EGDQQNPAPAGQVDYTKAWEE---YYKKMGQAVPA--PTGAPPGGQPDYSA 637
Score = 68 (29.0 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 30/96 (31%), Positives = 39/96 (40%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
Q +G PH QQQ P A +G P + +Y + PPA+ G P
Sbjct: 531 QGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPT----TT 586
Query: 659 PNYPQPGGQQAPS-YGQVAPTAGYGQYTNTQ-QAYP 692
Q G QQ P+ GQV T + +Y QA P
Sbjct: 587 QTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVP 622
Score = 63 (27.2 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 500 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA 558
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 559 AWAAYYAHYYQQQAQP 574
Score = 45 (20.9 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 31/115 (26%), Positives = 43/115 (37%)
Query: 560 YHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYA 619
Y+Q Q +PP PA G P + QV +++ Q A
Sbjct: 567 YYQQQ-AQPPPAAPA-GA-PTTTQTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPA 623
Query: 620 TSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQ 674
+G P Y +A A + Y Q A Y Q + Q +P +P P AP GQ
Sbjct: 624 PTGAPPGGQPDYSAAWA-EYYRQQAAY---YAQTSPQGMPQHP-P----APQ-GQ 668
>RGD|1591892 [details] [associations]
symbol:Fubp1 "far upstream element (FUSE) binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 RGD:1591892
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003723 CTD:8880 eggNOG:NOG300923 HOVERGEN:HBG000625
KO:K13210 InterPro:IPR015096 Pfam:PF09005 EMBL:BC107942
IPI:IPI00373591 RefSeq:NP_001032742.1 UniGene:Rn.177078
ProteinModelPortal:Q32PX7 SMR:Q32PX7 STRING:Q32PX7
PhosphoSite:Q32PX7 PRIDE:Q32PX7 GeneID:654496 KEGG:rno:654496
NextBio:714902 Genevestigator:Q32PX7 Uniprot:Q32PX7
Length = 639
Score = 273 (101.2 bits), Expect = 9.5e-23, Sum P(2) = 9.5e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 275 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 331
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 332 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 391
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 392 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 450
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 451 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 507
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 508 AYPHWQQQAPPDPAKAGTDPN 528
Score = 248 (92.4 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 96 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 152
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 153 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 204
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 205 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 250
Score = 208 (78.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 183 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 241
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 242 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 296
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 297 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 338
Score = 124 (48.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +TG ++
Sbjct: 99 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCMLTGTPESVQS 154
Query: 359 AQEMIKEVLSQTVRPS 374
A+ ++ +++ + RP+
Sbjct: 155 AKRLLDQIVEKG-RPA 169
Score = 86 (35.3 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 42/144 (29%), Positives = 49/144 (34%)
Query: 622 GPTQQTYPSYGSAP--APDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTA 679
GP P P P + P PG P P P P G AP +G AP A
Sbjct: 444 GPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGP-AP-HGPPAPYA 501
Query: 680 --GYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAAT 736
G+G Y + QQ P PA + GT QP A PA
Sbjct: 502 PQGWGNAYPHWQQQAPPDPAKA-------GTDPNSAAWAAYYAHYYQQQAQPPPAAPAGA 554
Query: 737 QPSYDQSASQSTAYGVAQGTAAAG 760
P+ Q+ Q G Q A AG
Sbjct: 555 -PTTTQTNGQ----GDQQNPAPAG 573
Score = 82 (33.9 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 35/103 (33%), Positives = 43/103 (41%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAP-G----Y-PQQAGQAVPN 660
P+ PH P+ GP P PAP YN PP AP G Y PQ G A P+
Sbjct: 454 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGPPGPAPHGPPAPYAPQGWGNAYPH 511
Query: 661 YPQ---PGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNA 700
+ Q P +A + A A Y + QQA P A + A
Sbjct: 512 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGA 554
Score = 67 (28.6 bits), Expect = 9.5e-23, Sum P(2) = 9.5e-23
Identities = 24/72 (33%), Positives = 30/72 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYP---QQAG 655
Q +G PH QQQ P A +G P + +Y + PPA+ G P Q G
Sbjct: 503 QGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNG 562
Query: 656 QAVPNYPQPGGQ 667
Q P P GQ
Sbjct: 563 QGDQQNPAPAGQ 574
Score = 63 (27.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 472 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA 530
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 531 AWAAYYAHYYQQQAQP 546
Score = 37 (18.1 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
PP P G+ + Q+ P P+ Y Y A + G PP
Sbjct: 546 PPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPP 600
>UNIPROTKB|Q32PX7 [details] [associations]
symbol:Fubp1 "Far upstream element-binding protein 1"
species:10116 "Rattus norvegicus" [GO:0010628 "positive regulation
of gene expression" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1591892 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003723 CTD:8880 eggNOG:NOG300923 HOVERGEN:HBG000625
KO:K13210 InterPro:IPR015096 Pfam:PF09005 EMBL:BC107942
IPI:IPI00373591 RefSeq:NP_001032742.1 UniGene:Rn.177078
ProteinModelPortal:Q32PX7 SMR:Q32PX7 STRING:Q32PX7
PhosphoSite:Q32PX7 PRIDE:Q32PX7 GeneID:654496 KEGG:rno:654496
NextBio:714902 Genevestigator:Q32PX7 Uniprot:Q32PX7
Length = 639
Score = 273 (101.2 bits), Expect = 9.5e-23, Sum P(2) = 9.5e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 275 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 331
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 332 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 391
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 392 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 450
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 451 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 507
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 508 AYPHWQQQAPPDPAKAGTDPN 528
Score = 248 (92.4 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 96 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 152
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 153 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 204
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 205 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 250
Score = 208 (78.3 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 183 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 241
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 242 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 296
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 297 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 338
Score = 124 (48.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +TG ++
Sbjct: 99 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCMLTGTPESVQS 154
Query: 359 AQEMIKEVLSQTVRPS 374
A+ ++ +++ + RP+
Sbjct: 155 AKRLLDQIVEKG-RPA 169
Score = 86 (35.3 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 42/144 (29%), Positives = 49/144 (34%)
Query: 622 GPTQQTYPSYGSAP--APDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTA 679
GP P P P + P PG P P P P G AP +G AP A
Sbjct: 444 GPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGP-AP-HGPPAPYA 501
Query: 680 --GYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAAT 736
G+G Y + QQ P PA + GT QP A PA
Sbjct: 502 PQGWGNAYPHWQQQAPPDPAKA-------GTDPNSAAWAAYYAHYYQQQAQPPPAAPAGA 554
Query: 737 QPSYDQSASQSTAYGVAQGTAAAG 760
P+ Q+ Q G Q A AG
Sbjct: 555 -PTTTQTNGQ----GDQQNPAPAG 573
Score = 82 (33.9 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 35/103 (33%), Positives = 43/103 (41%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAP-G----Y-PQQAGQAVPN 660
P+ PH P+ GP P PAP YN PP AP G Y PQ G A P+
Sbjct: 454 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGPPGPAPHGPPAPYAPQGWGNAYPH 511
Query: 661 YPQ---PGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNA 700
+ Q P +A + A A Y + QQA P A + A
Sbjct: 512 WQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGA 554
Score = 67 (28.6 bits), Expect = 9.5e-23, Sum P(2) = 9.5e-23
Identities = 24/72 (33%), Positives = 30/72 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYP---QQAG 655
Q +G PH QQQ P A +G P + +Y + PPA+ G P Q G
Sbjct: 503 QGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNG 562
Query: 656 QAVPNYPQPGGQ 667
Q P P GQ
Sbjct: 563 QGDQQNPAPAGQ 574
Score = 63 (27.2 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 472 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA 530
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 531 AWAAYYAHYYQQQAQP 546
Score = 37 (18.1 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
PP P G+ + Q+ P P+ Y Y A + G PP
Sbjct: 546 PPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPP 600
>UNIPROTKB|J9P014 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 EMBL:AAEX03004886
Ensembl:ENSCAFT00000046408 Uniprot:J9P014
Length = 644
Score = 273 (101.2 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 455
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 456 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 512
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 513 AYPHWQQQAPPDPAKAGTDPN 533
Score = 248 (92.4 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 101 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 157
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 158 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 209
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 210 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 208 (78.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 188 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 246
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 247 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 301
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 302 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 343
Score = 126 (49.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 95 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 150
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 151 TGTPESVQSAKRLLDQIVEKG-RPA 174
Score = 82 (33.9 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 47/170 (27%), Positives = 56/170 (32%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P+ PH P+ GP P PAP YN P PG P G P PQ G
Sbjct: 459 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGP---PG-PAPHGPPAPYAPQGWGN 512
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
P + Q AP T+ A A A Y YQ GQ
Sbjct: 513 AYPHWQQQAPPDPAKAGTDPNSA---AWAAYYAHY-YQQQAQPPPAAPAGAPTTTQTNGQ 568
Query: 728 PGYAQPA-ATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
PA A Q Y ++ + Y G A T +P G P Y +
Sbjct: 569 GDQQNPAPAGQVDYTKAWEE---YYKKMGQAVPA--PTGAPPGGQPDYSA 613
Score = 67 (28.6 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 24/72 (33%), Positives = 30/72 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYP---QQAG 655
Q +G PH QQQ P A +G P + +Y + PPA+ G P Q G
Sbjct: 508 QGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNG 567
Query: 656 QAVPNYPQPGGQ 667
Q P P GQ
Sbjct: 568 QGDQQNPAPAGQ 579
Score = 63 (27.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 477 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSA 535
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 536 AWAAYYAHYYQQQAQP 551
Score = 37 (18.1 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
PP P G+ + Q+ P P+ Y Y A + G PP
Sbjct: 551 PPPAAPAGAPTTTQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPP 605
>UNIPROTKB|F1NV59 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 EMBL:AADN02012752 IPI:IPI00579990
Ensembl:ENSGALT00000014526 ArrayExpress:F1NV59 Uniprot:F1NV59
Length = 632
Score = 251 (93.4 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 81/265 (30%), Positives = 121/265 (45%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
R++ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G
Sbjct: 259 REVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQH 315
Query: 262 AEKLINAVIAEADAG--GSPSLVA-RGLATAQAS------GAAEQVEIKVPNEKVGLIIG 312
A ++I ++ AG G P RG Q + G ++ VP K GLIIG
Sbjct: 316 AAEIITDLLRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 375
Query: 313 RG-----GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+G GETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E +
Sbjct: 376 KGNVSLRGETIKSISQQSGARIELQRNPPPNADPNM-KMFTIRGTPQQIDYARQLIEEKI 434
Query: 368 SQTVRP--STLSGGFNQQAYRPRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHY 424
V P + G + P P GPP G P G P P Y+ GP P P
Sbjct: 435 GGPVNPLGPPVPHGPHGVVPGPHGPPGPPGPGAPMG--PYNPAPYNPGPPGPAP-HGPPA 491
Query: 425 PHLP--YGNYPPQQMAPRSNYGGPP 447
P+ P +GN P P G P
Sbjct: 492 PYAPQGWGNAYPHWQPPNPPDPGKP 516
Score = 249 (92.7 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 66/193 (34%), Positives = 106/193 (54%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 98 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 154
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 155 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 206
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++ GG
Sbjct: 207 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELIRD-------QGG 257
Query: 380 FNQQAYRPRVPTG 392
F + PR G
Sbjct: 258 FREVPI-PRFAVG 269
Score = 89 (36.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 60/195 (30%), Positives = 68/195 (34%)
Query: 607 GPNVPHQQQY----PYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAP-G----Y-PQQAG 655
GP VPH P+ GP P PAP YN PP AP G Y PQ G
Sbjct: 442 GPPVPHGPHGVVPGPHGPPGPPGPGAPMGPYNPAP--YNPGPPGPAPHGPPAPYAPQGWG 499
Query: 656 QAVPNYPQPG----GQQAPSYGQVAPTAGYGQYTNTQQ-----AYPEQPATSNA-GYGYQ 705
A P++ P G+ A A Y Y Q A P PAT+ G G Q
Sbjct: 500 NAYPHWQPPNPPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQ 559
Query: 706 ------GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA 759
G D P A P QP Y S A+ AA
Sbjct: 560 PNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGG-QPDY------SAAWAEYYRQQAA 612
Query: 760 GYGKTVSPQPGYPQY 774
Y +T SPQ G PQ+
Sbjct: 613 YYAQT-SPQ-GMPQH 625
Score = 60 (26.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 25/85 (29%), Positives = 30/85 (35%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL-P--- 428
P G +N Y P P GP GP + Q YP P +P P P
Sbjct: 465 PGAPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSA 523
Query: 429 -----YGNYPPQQMAP--RSNYGGP 446
Y +Y QQ P + GGP
Sbjct: 524 AWAAYYAHYYQQQAQPPPAAPPGGP 548
Score = 46 (21.3 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 43/156 (27%), Positives = 52/156 (33%)
Query: 540 PYGGHSNSQPV-YSQGGLQSGYHQHQYGKPPY-GMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
P G + P Y+ G + Y Q PP G P GT P S Q
Sbjct: 481 PPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKP--GTDPNSAAWAAYYAHYYQQQAQ 538
Query: 598 SQ--VP-----SAQSYG----PNVPHQQQYPYATSGPTQQTYPSYGSA-PAPDSY---NQ 642
P + Q+ G PN Q Y + ++ Y G A PAP Q
Sbjct: 539 PPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAW--EEYYKKMGQAVPAPAGAPPGGQ 596
Query: 643 PPASAPG---YPQQAGQAVPNYPQPGGQQAPS-YGQ 674
P SA Y QQA PQ Q P+ GQ
Sbjct: 597 PDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 632
>UNIPROTKB|F1S9S9 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GO:GO:0010628 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:CU695021
Ensembl:ENSSSCT00000004169 Uniprot:F1S9S9
Length = 708
Score = 273 (101.2 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 84/261 (32%), Positives = 122/261 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 320 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 376
Query: 264 KLINAVIAEADAG--GSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G P RG Q + G ++ VP K GLIIG+GG
Sbjct: 377 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 436
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
ETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 437 ETIKSISQQSGARIELQRNPPPNADPNM-KLFTIRGTPQQIDYARQLIEEKIGGPVNPLG 495
Query: 376 LSGGFNQQAYR-PRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--YGN 431
P P GPP G P G P P Y+ GP P P P+ P +GN
Sbjct: 496 PPVPHGPHGVPGPHGPPGPPGPGTPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGWGN 552
Query: 432 -YPP-QQMAPR--SNYGGPPN 448
YP QQ AP + G PN
Sbjct: 553 AYPHWQQQAPPDPAKTGTDPN 573
Score = 248 (92.4 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 60/168 (35%), Positives = 99/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 141 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 197
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 198 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 249
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 250 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 295
Score = 208 (78.3 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 53/167 (31%), Positives = 95/167 (56%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 228 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 286
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 287 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 341
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L
Sbjct: 342 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL 383
Score = 126 (49.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P + G ER +
Sbjct: 135 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP----DSGGLPERSCML 190
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPS 374
TG ++ A+ ++ +++ + RP+
Sbjct: 191 TGTPESVQSAKRLLDQIVEKG-RPA 214
Score = 83 (34.3 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 51/184 (27%), Positives = 62/184 (33%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAP-G----Y-PQQAGQAVPN 660
P+ PH P+ GP P PAP YN PP AP G Y PQ G A P+
Sbjct: 499 PHGPHGVPGPHGPPGPPGPGTPMGPYNPAP--YNPGPPGPAPHGPPAPYAPQGWGNAYPH 556
Query: 661 YPQPGGQQAPSYG----QVAPTAGYGQYTNTQ-QAYPEQPA---TSNAGYGYQGTQDXXX 712
+ Q G A A Y Y Q Q P PA T+ G +G Q
Sbjct: 557 WQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQEGDQQNPA 616
Query: 713 XXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYP 772
Q TQ Y ++ + Y QG A T +P G P
Sbjct: 617 PAGQVDYTKAWEEYYKKMGQQGQTQ-DYSKAWEE---YYKKQGQAVPA--PTGAPPGGQP 670
Query: 773 QYDS 776
Y +
Sbjct: 671 DYSA 674
Score = 65 (27.9 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 27/87 (31%), Positives = 36/87 (41%)
Query: 604 QSYGPNVPH-QQQYPY--ATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
Q +G PH QQQ P A +G P + +Y + PPA+ G P
Sbjct: 548 QGWGNAYPHWQQQAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPT----TT 603
Query: 659 PNYPQPGGQQAPS-YGQVAPTAGYGQY 684
Q G QQ P+ GQV T + +Y
Sbjct: 604 QTNGQEGDQQNPAPAGQVDYTKAWEEY 630
Score = 65 (27.9 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 23/76 (30%), Positives = 29/76 (38%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP----QRGPYPSQNPHYPHLP 428
P T G +N Y P P GP GP + Q YP Q P P++ P+
Sbjct: 517 PGTPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKTGTDPNSA 575
Query: 429 -----YGNYPPQQMAP 439
Y +Y QQ P
Sbjct: 576 AWAAYYAHYYQQQAQP 591
Score = 46 (21.3 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 31/121 (25%), Positives = 42/121 (34%)
Query: 560 YHQHQYGKPPYGMPAQG-TQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQ-QQYP 617
Y+Q Q +PP PA T Q+ + + Y + Q Q
Sbjct: 584 YYQQQ-AQPPPAAPAGAPTTTQTNGQEGDQQNPAPAGQVDYTKAWEEYYKKMGQQGQTQD 642
Query: 618 YATSGPTQQTYPSYGSA-PAPDSY---NQPPASAPG---YPQQAGQAVPNYPQPGGQQAP 670
Y+ + ++ Y G A PAP QP SA Y QQA PQ Q P
Sbjct: 643 YSKAW--EEYYKKQGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP 700
Query: 671 S 671
+
Sbjct: 701 A 701
>ZFIN|ZDB-GENE-030131-4357 [details] [associations]
symbol:khsrp "KH-type splicing regulatory protein"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-030131-4357 GO:GO:0003723
InterPro:IPR015096 Pfam:PF09005 OMA:QASGNCH
GeneTree:ENSGT00650000093048 EMBL:AL929150 IPI:IPI00482681
Ensembl:ENSDART00000038330 ArrayExpress:F1QXP8 Bgee:F1QXP8
Uniprot:F1QXP8
Length = 666
Score = 251 (93.4 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 64/194 (32%), Positives = 107/194 (55%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI D+ P R V I G
Sbjct: 106 SMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIAPDSGGLPD---RSVSITGGPEA 162
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA+ +++ +++ G PS +G+ E+ +P K GLIIG+GGETI
Sbjct: 163 IQKAKMMLDDIVSRG-RGTPPSF------HESTNGSGHMQEMVIPAGKAGLIIGKGGETI 215
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ LI Q +G + ++ +R+ GD +++ A+EM++E+L + P
Sbjct: 216 KQLQERAGVKMILI-QDASQGP-NMDKPLRIIGDPYKVQQAREMVQEILRERDHP----- 268
Query: 379 GFNQQAYRPRVPTG 392
GF + Y R+ G
Sbjct: 269 GFERNEYGSRMGGG 282
Score = 238 (88.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 69/260 (26%), Positives = 120/260 (46%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VGV+IG++G+ I+ +Q ++G +IQ D P + I+G + A
Sbjct: 297 EVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPDDGTGPD---KIAHIMGPPDRCEHA 353
Query: 263 EKLINAV-----IAEADAGGSPSLVARGL-----ATAQASGA------AEQVEIKVPNEK 306
+IN + + E GG P G+ + G ++ +P K
Sbjct: 354 ASIINELLQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGGNWGGPPGSEMTFSIPAHK 413
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
GL+IGRGGE +K + ++GA +++ Q P GD + ++ + G +QI+ A+++I++
Sbjct: 414 CGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNF-KLFTIRGSPQQIDHAKQLIEDK 472
Query: 367 LSQTV----------RPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGP 416
+ + P+ G +N Y+P P GPP GP G Q Y Q P
Sbjct: 473 IEGPLCPVGPGPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPPGGQYPQGWGNAYQQWQP 532
Query: 417 Y-PSQNPHYPHLPYGNYPPQ 435
+ PS+ P+ + Y Q
Sbjct: 533 HDPSKAATDPNAAWAAYYAQ 552
Score = 233 (87.1 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 64/206 (31%), Positives = 102/206 (49%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+++ +P K G++IGK G+TI+ LQ +G K+ + +DA P+ +P+ IIG + +
Sbjct: 195 QEMVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQGPNM-DKPLRIIGDPYKVQQ 253
Query: 262 AEKLINAVIAEADAGG------SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
A +++ ++ E D G + G G +E+ VP VG++IGR G
Sbjct: 254 AREMVQEILRERDHPGFERNEYGSRMGGGGGGGGGGGGGGGGIEVPVPRHSVGVVIGRSG 313
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
E IK +Q +G RIQ P +G G ++I + G + E A +I E+L Q++R
Sbjct: 314 EMIKKIQNDAGVRIQFKPD---DGTGP-DKIAHIMGPPDRCEHAASIINELL-QSIRVRE 368
Query: 376 LSGGFNQQAYRPRVPTGPPQWG-PRG 400
GG P GPP G P G
Sbjct: 369 EGGGG---------PPGPPGTGMPPG 385
Score = 88 (36.0 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 50/184 (27%), Positives = 67/184 (36%)
Query: 536 PVQHPYGGHSNSQPV--YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXX 593
PV GG + P+ Y+ Q G G PP+G P G PQ +
Sbjct: 479 PVGPGPGGPGPAGPMGPYNPNPYQPG----PPGGPPHGGPPGGQYPQGWGNAYQQ----- 529
Query: 594 XXYQSQVPSAQSYGPNVP---HQQQYPYATSGPTQ--QTYPSYGSAPAPDSYNQ--PPAS 646
+Q PS + PN + QY G QT + +AP P +Q P A+
Sbjct: 530 --WQPHDPSKAATDPNAAWAAYYAQYYQQPGGAAMPGQTPAAQPAAPGPADQSQAAPGAA 587
Query: 647 APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGY----GQYTNTQQAYPEQPATSNAGY 702
P Y + + GG AP+ A AG GQ T+ A+ E A Y
Sbjct: 588 QPDYTKAWEEYYKKMAAAGGGAAPAAAGGAQPAGAAAAAGQ-TDYSAAWAEYYRQQAAYY 646
Query: 703 GYQG 706
G G
Sbjct: 647 GQTG 650
Score = 70 (29.7 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 45/164 (27%), Positives = 54/164 (32%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXX---XXY 596
P+GG Q Y QG + Y Q Q P+ T P +
Sbjct: 510 PHGGPPGGQ--YPQGW-GNAYQQWQ----PHDPSKAATDPNAAWAAYYAQYYQQPGGAAM 562
Query: 597 QSQVPSAQSYGPNVPHQQQY-PYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAG 655
Q P+AQ P Q Q P A + + Y A PA+A G Q AG
Sbjct: 563 PGQTPAAQPAAPGPADQSQAAPGAAQPDYTKAWEEYYKKMAAAGGGAAPAAAGG-AQPAG 621
Query: 656 QAVP----NYPQPGG----QQAPSYGQVAPTAGY-GQYTNTQQA 690
A +Y QQA YGQ T G G QQA
Sbjct: 622 AAAAAGQTDYSAAWAEYYRQQAAYYGQTGQTPGQPGATPQGQQA 665
Score = 65 (27.9 bits), Expect = 8.4e-20, Sum P(3) = 8.4e-20
Identities = 45/172 (26%), Positives = 56/172 (32%)
Query: 622 GPTQQTYPSYGS-APA-P-DSYNQPP--ASAPGYPQQAGQAVPNYPQPGG---QQ----A 669
GP P G PA P YN P PG P G YPQ G QQ
Sbjct: 475 GPLCPVGPGPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPPGGQYPQGWGNAYQQWQPHD 534
Query: 670 PSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPG 729
PS P A + Y Y +QP G G PG
Sbjct: 535 PSKAATDPNAAWAAY---YAQYYQQPG----GAAMPGQTPAAQPAAPGPADQSQAA--PG 585
Query: 730 YAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYA 781
AQP T+ ++++ + A G AAAG + Q D + +A
Sbjct: 586 AAQPDYTK-AWEEYYKKMAAAGGGAAPAAAGGAQPAGAAAAAGQTDYSAAWA 636
Score = 39 (18.8 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 439 PRSNYGGPP 447
P N+GGPP
Sbjct: 393 PGGNWGGPP 401
>UNIPROTKB|E1BX03 [details] [associations]
symbol:FUBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0010628 "positive regulation of gene
expression" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GO:GO:0010628 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 OMA:NGQEGDQ EMBL:AADN02012752
IPI:IPI00679838 Ensembl:ENSGALT00000014525 ArrayExpress:E1BX03
Uniprot:E1BX03
Length = 645
Score = 262 (97.3 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 80/258 (31%), Positives = 119/258 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAG--GSPSLVA-RGLATAQAS------GAAEQVEIKVPNEKVGLIIGRG 314
++I ++ AG G P RG Q + G ++ VP K GLIIG+G
Sbjct: 336 EIITDLLRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKG 395
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP- 373
GETIK + +SGARI+L P D + ++ + G +QI+ A+++I+E + V P
Sbjct: 396 GETIKSISQQSGARIELQRNPPPNADPNM-KMFTIRGTPQQIDYARQLIEEKIGGPVNPL 454
Query: 374 -STLSGGFNQQAYRPRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP--Y 429
+ G + P P GPP G P G P P Y+ GP P P P+ P +
Sbjct: 455 GPPVPHGPHGVVPGPHGPPGPPGPGAPMG--PYNPAPYNPGPPGPAP-HGPPAPYAPQGW 511
Query: 430 GNYPPQQMAPRSNYGGPP 447
GN P P G P
Sbjct: 512 GNAYPHWQPPNPPDPGKP 529
Score = 241 (89.9 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 59/168 (35%), Positives = 98/168 (58%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ R + GT ++
Sbjct: 98 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPALDSGG-LPERSCMLTGTPESV 156
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 157 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 208
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 209 QLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 213 (80.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 63/202 (31%), Positives = 108/202 (53%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 187 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQ 245
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + R ++ G E +++ +P VG++IGR GE IK +
Sbjct: 246 AKEMVLELIR--DQGGFREV--RNEYGSRIGGN-EGIDVPIPRFAVGIVIGRNGEMIKKI 300
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
Q +G RIQ P DG+ +RI ++TG + + A E+I ++L ++V+ GG
Sbjct: 301 QNDAGVRIQFKPD-----DGTTPDRIAQITGPPDRCQHAAEIITDLL-RSVQAGN-PGGP 353
Query: 381 NQQAYRPRVPTGPPQW--GPRG 400
R R G W GP G
Sbjct: 354 GGPGGRGR-GRGQGNWNMGPPG 374
Score = 128 (50.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P L G G ER +TG ++
Sbjct: 101 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPA-LDSG-GLPERSCMLTGTPESVQS 158
Query: 359 AQEMIKEVLSQTVRPS 374
A+ ++ +++ + RP+
Sbjct: 159 AKRLLDQIVEKG-RPA 173
Score = 89 (36.4 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 60/195 (30%), Positives = 68/195 (34%)
Query: 607 GPNVPHQQQY----PYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAP-G----Y-PQQAG 655
GP VPH P+ GP P PAP YN PP AP G Y PQ G
Sbjct: 455 GPPVPHGPHGVVPGPHGPPGPPGPGAPMGPYNPAP--YNPGPPGPAPHGPPAPYAPQGWG 512
Query: 656 QAVPNYPQPG----GQQAPSYGQVAPTAGYGQYTNTQQ-----AYPEQPATSNA-GYGYQ 705
A P++ P G+ A A Y Y Q A P PAT+ G G Q
Sbjct: 513 NAYPHWQPPNPPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQ 572
Query: 706 ------GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA 759
G D P A P QP Y S A+ AA
Sbjct: 573 PNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAPPGG-QPDY------SAAWAEYYRQQAA 625
Query: 760 GYGKTVSPQPGYPQY 774
Y +T SPQ G PQ+
Sbjct: 626 YYAQT-SPQ-GMPQH 638
Score = 60 (26.2 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 25/85 (29%), Positives = 30/85 (35%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL-P--- 428
P G +N Y P P GP GP + Q YP P +P P P
Sbjct: 478 PGAPMGPYNPAPYNPG-PPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSA 536
Query: 429 -----YGNYPPQQMAP--RSNYGGP 446
Y +Y QQ P + GGP
Sbjct: 537 AWAAYYAHYYQQQAQPPPAAPPGGP 561
Score = 46 (21.3 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 43/156 (27%), Positives = 52/156 (33%)
Query: 540 PYGGHSNSQPV-YSQGGLQSGYHQHQYGKPPY-GMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
P G + P Y+ G + Y Q PP G P GT P S Q
Sbjct: 494 PPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKP--GTDPNSAAWAAYYAHYYQQQAQ 551
Query: 598 SQ--VP-----SAQSYG----PNVPHQQQYPYATSGPTQQTYPSYGSA-PAPDSY---NQ 642
P + Q+ G PN Q Y + ++ Y G A PAP Q
Sbjct: 552 PPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAW--EEYYKKMGQAVPAPAGAPPGGQ 609
Query: 643 PPASAPG---YPQQAGQAVPNYPQPGGQQAPS-YGQ 674
P SA Y QQA PQ Q P+ GQ
Sbjct: 610 PDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ 645
>UNIPROTKB|Q8UVD9 [details] [associations]
symbol:KHSRP "Far upstream element-binding protein 2"
species:9031 "Gallus gallus" [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0005737 GO:GO:0003730
GO:GO:0008298 GO:GO:0051028 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 EMBL:AF461020 IPI:IPI00589044
RefSeq:NP_989608.1 UniGene:Gga.94 ProteinModelPortal:Q8UVD9
SMR:Q8UVD9 PRIDE:Q8UVD9 GeneID:374140 KEGG:gga:374140 CTD:8570
NextBio:20813655 Uniprot:Q8UVD9
Length = 769
Score = 243 (90.6 bits), Expect = 9.8e-21, Sum P(2) = 9.8e-21
Identities = 68/237 (28%), Positives = 112/237 (47%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 390 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPERCEHAA 446
Query: 264 KLINAVIAEADAG--GSPS--LVARGLATAQASGA----AEQVEIKVPNEKVGLIIGRGG 315
++IN ++ +G G P + G + G ++ +P K GL+IGRGG
Sbjct: 447 RIINDLLQSLRSGPPGPPGHGMPPGGRGRGRGQGIWGPPGGEMTFSIPTHKCGLVIGRGG 506
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
E +K + + GA +++ Q P GD + + + + G +QIE A++ I+E + + P
Sbjct: 507 ENVKAINQQRGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIEHAKQPIEEKIEGPLCPVG 565
Query: 376 LSGGFNQQAYRPRVPTGPPQWGP-RGSHPSQPMAYDYPQRG---PYPSQNPHYPHLP 428
G P P GP GP P P + YP +G YP P PH P
Sbjct: 566 PGPGPGGPP-GPAGPMGPFNPGPFNQGPPGGPPPHQYPPQGWGNTYPQWQPPAPHDP 621
Score = 232 (86.7 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 64/204 (31%), Positives = 109/204 (53%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G+
Sbjct: 208 TVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGSPEA 264
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA+ +++ +++ GG P A Q +G + EI +P K GL+IG+GGETI
Sbjct: 265 VQKAKLMLDDIVSRG-RGGPPGQF-HDYANGQ-NGTVQ--EIMIPAGKAGLVIGKGGETI 319
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ R+G ++ I + K +R+ GD +++ A EM+ ++L + + G
Sbjct: 320 KQLQERAGVKMIFIQDGSQNTNVDKP--LRIIGDPYKVQQACEMVMDILRERDQ-----G 372
Query: 379 GF-NQQAYRPRVPTGPPQWGPRGS 401
GF ++ Y R+ G PR S
Sbjct: 373 GFGDRNEYGSRIGGGIDVPVPRHS 396
Score = 214 (80.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 62/201 (30%), Positives = 101/201 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ +D + + +P+ IIG + +
Sbjct: 299 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQNTNV-DKPLRIIGDPYKVQQ 357
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G ++ G +++ VP VG++IGR GE IK +
Sbjct: 358 ACEMVMDILRERDQGGFGDRNEYG---SRIGGG---IDVPVPRHSVGVVIGRSGEMIKKI 411
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR--PSTLSGG 379
Q +G RIQ +G G E+I + G + E A +I ++L Q++R P G
Sbjct: 412 QNDAGVRIQFKQD---DGTGP-EKIAHIMGPPERCEHAARIINDLL-QSLRSGPPGPPGH 466
Query: 380 FNQQAYRPRVPTGPPQWGPRG 400
R R G WGP G
Sbjct: 467 GMPPGGRGR-GRGQGIWGPPG 486
Score = 83 (34.3 bits), Expect = 9.8e-21, Sum P(2) = 9.8e-21
Identities = 45/175 (25%), Positives = 58/175 (33%)
Query: 527 GHGYDDNHAPVQH-PYGGHSNSQPVYSQGGLQSGYHQHQYG----KPPY--GMPAQGTQP 579
G+ Y P H P + + P + G S Y+Q G +PP P QG P
Sbjct: 607 GNTYPQWQPPAPHDPSKAAAAADPNAAWAGYYSHYYQQPPGPVPGQPPAPTAPPVQGEPP 666
Query: 580 QSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDS 639
Q Y ++ Q P P QQ Y A ++ + P +
Sbjct: 667 QPPPTGQSDYTKAWEEYYKKI-GQQPQQPGAPPQQDYTKAWEEYYKKQAAQVATGGGPGA 725
Query: 640 YNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQ 694
PP P Y A Y + QQA YGQ AG TQQ Q
Sbjct: 726 ---PPGPQPDY----SAAWAEYYR---QQAAYYGQTPGAAGPAP-PPTQQGQQAQ 769
Score = 76 (31.8 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 44/166 (26%), Positives = 53/166 (31%)
Query: 622 GPTQQTYPSYGSAPA-PDSYNQ-PPASAPG--YPQQA-GQAVPNYPQPGGQQAPSYGQVA 676
GP P+ P P +NQ PP P YP Q G P + QP PS A
Sbjct: 569 GPGGPPGPAGPMGPFNPGPFNQGPPGGPPPHQYPPQGWGNTYPQW-QPPAPHDPSKAAAA 627
Query: 677 --PTAGY-GQYTNTQQA----YPEQPATSNA----GYGYQGTQDXXXXXXXXXXXXXXXT 725
P A + G Y++ Q P QP A G Q
Sbjct: 628 ADPNAAWAGYYSHYYQQPPGPVPGQPPAPTAPPVQGEPPQPPPTGQSDYTKAWEEYYKKI 687
Query: 726 GQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY 771
GQ A Q Y ++ + AQ G G PQP Y
Sbjct: 688 GQQPQQPGAPPQQDYTKAWEEYYKKQAAQVATGGGPGAPPGPQPDY 733
Score = 66 (28.3 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 46/183 (25%), Positives = 55/183 (30%)
Query: 568 PPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQT 627
PP G P PQ + S+ +A PN Y + P
Sbjct: 592 PPGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAD--PNAAWAGYYSHYYQQPPGPV 649
Query: 628 YPSYGSAP-APDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYG---QVAPTAGYGQ 683
P AP AP +PP P +A Y + GQQ G Q T + +
Sbjct: 650 -PGQPPAPTAPPVQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEE 708
Query: 684 YTNTQQAYPEQPATSNAGYGYQGTQ-DXXXXXXXXXXXXXXXTGQ-PGYAQPAATQPSYD 741
Y Q A Q AT G Q D GQ PG A PA
Sbjct: 709 YYKKQAA---QVATGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGAAGPAPPPTQQG 765
Query: 742 QSA 744
Q A
Sbjct: 766 QQA 768
Score = 64 (27.6 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 20/57 (35%), Positives = 23/57 (40%)
Query: 394 PQWGPRGSH-PSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSN--YGGPP 447
PQW P H PS+ A P + HY P G P Q AP + G PP
Sbjct: 611 PQWQPPAPHDPSKAAAAADPNAA-WAGYYSHYYQQPPGPVPGQPPAPTAPPVQGEPP 666
>UNIPROTKB|Q96I24 [details] [associations]
symbol:FUBP3 "Far upstream element-binding protein 3"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010628 "positive regulation of gene expression"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 EMBL:U69127 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0003677 EMBL:CH471090
GO:GO:0006351 GO:GO:0003723 EMBL:AL359092 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210 EMBL:AK295155
EMBL:AL353695 EMBL:BC001325 EMBL:BC007874 EMBL:BC137338
EMBL:BC137340 IPI:IPI00063245 IPI:IPI00377261 RefSeq:NP_003925.1
UniGene:Hs.673029 UniGene:Hs.98751 ProteinModelPortal:Q96I24
SMR:Q96I24 DIP:DIP-50124N IntAct:Q96I24 STRING:Q96I24
PhosphoSite:Q96I24 DMDM:37078499 REPRODUCTION-2DPAGE:IPI00377261
PaxDb:Q96I24 PRIDE:Q96I24 DNASU:8939 Ensembl:ENST00000319725
Ensembl:ENST00000372376 GeneID:8939 KEGG:hsa:8939 UCSC:uc004bzr.1
UCSC:uc010mzd.1 CTD:8939 GeneCards:GC09P133454 HGNC:HGNC:4005
HPA:HPA047658 MIM:603536 neXtProt:NX_Q96I24 PharmGKB:PA28421
InParanoid:Q96I24 OMA:AAPHQNT OrthoDB:EOG4X97H1 PhylomeDB:Q96I24
GenomeRNAi:8939 NextBio:33614 ArrayExpress:Q96I24 Bgee:Q96I24
CleanEx:HS_FUBP3 Genevestigator:Q96I24 GermOnline:ENSG00000107164
Uniprot:Q96I24
Length = 572
Score = 242 (90.2 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 63/187 (33%), Positives = 105/187 (56%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESI 134
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G P G S + Q EI +P KVGL+IGRGGETIK
Sbjct: 135 EQAKRLLGQIVDRCRNG--P-----GFHNDIDSNSTIQ-EILIPASKVGLVIGRGGETIK 186
Query: 320 GLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST--L 376
LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ + + +
Sbjct: 187 QLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV 243
Query: 377 SGGFNQQ 383
G FN +
Sbjct: 244 RGDFNSR 250
Score = 227 (85.0 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 66/231 (28%), Positives = 109/231 (47%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADA-GGSPSLVARGLATAQ----ASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I E D GG + RG A G +++ VP +K GL+IG
Sbjct: 312 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGTNL 430
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPH 423
+ G F Q + P PP + + P + +P + NPH
Sbjct: 431 GAP--GAFGQSPFSQ--PPAPPH---QNTFPPRSSGC-FPNMAAKVNGNPH 473
Score = 74 (31.1 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA-GQA 657
Q P +Q P PHQ +P +SG +P+ + + ++ P + P + Q G
Sbjct: 438 QSPFSQPPAP--PHQNTFPPRSSG----CFPNMAAKVNGNPHSTPVSGPPAFLTQGWGST 491
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNT-QQAYPEQPATSNA 700
+ QP QQ PS Q P + Y+ + Y +Q ++A
Sbjct: 492 YQAWQQPT-QQVPSQ-QSQPQSSQPNYSKAWEDYYKKQSHAASA 533
Score = 58 (25.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 25/80 (31%), Positives = 33/80 (41%)
Query: 614 QQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGG----QQA 669
QQ P S P Q + P+Y A D Y + +A PQ + P+Y QQ
Sbjct: 500 QQVPSQQSQP-QSSQPNYSKA-WEDYYKKQSHAASAAPQASSP--PDYTMAWAEYYRQQV 555
Query: 670 PSYGQVAPTAGYGQYTNTQQ 689
YGQ T G Q + +Q
Sbjct: 556 AFYGQ---TLGQAQAHSQEQ 572
Score = 53 (23.7 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 23/94 (24%), Positives = 33/94 (35%)
Query: 539 HPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQS 598
+P+ + P + G S Y Q +P +P+Q +QPQS QS
Sbjct: 471 NPHSTPVSGPPAFLTQGWGSTYQAWQ--QPTQQVPSQQSQPQSSQPNYSKAWEDYYKKQS 528
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYG 632
SA P Y A + +Q YG
Sbjct: 529 HAASA---APQASSPPDYTMAWAEYYRQQVAFYG 559
Score = 51 (23.0 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 30/132 (22%), Positives = 40/132 (30%)
Query: 631 YGSAPAPDSYNQ-PPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVA-PTAGYGQ-YTNT 687
+ PAP N PP S+ +P A + N P P G A T G+G Y
Sbjct: 441 FSQPPAPPHQNTFPPRSSGCFPNMAAKVNGN---P--HSTPVSGPPAFLTQGWGSTYQAW 495
Query: 688 QQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQS 747
QQ + P+ + Q + P T + Q
Sbjct: 496 QQPTQQVPSQQSQPQSSQPNYSKAWEDYYKKQSHAASAAPQASSPPDYTMAWAEYYRQQV 555
Query: 748 TAYGVAQGTAAA 759
YG G A A
Sbjct: 556 AFYGQTLGQAQA 567
Score = 43 (20.2 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 731 AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY 771
+QP ++QP+Y ++ Y Q AA+ + SP P Y
Sbjct: 507 SQPQSSQPNYSKAWED---YYKKQSHAASAAPQASSP-PDY 543
>UNIPROTKB|A6QP83 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
GeneTree:ENSGT00650000093048 CTD:8939 OMA:AAPHQNT OrthoDB:EOG4X97H1
EMBL:DAAA02032235 EMBL:DAAA02032236 EMBL:BC149198 IPI:IPI00714784
RefSeq:NP_001094687.1 UniGene:Bt.2190 SMR:A6QP83
Ensembl:ENSBTAT00000017383 GeneID:541080 KEGG:bta:541080
InParanoid:A6QP83 NextBio:20878996 Uniprot:A6QP83
Length = 572
Score = 240 (89.5 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 58/171 (33%), Positives = 98/171 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESI 134
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETIK
Sbjct: 135 EQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQ--------EIPIPASKVGLVIGKGGETIK 186
Query: 320 GLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 187 QLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 214 (80.4 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 66/211 (31%), Positives = 104/211 (49%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEA-DAGGSPSL-VARGLATAQAS------GAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A + G L VARG + G ++V VP +K GL+IG
Sbjct: 312 HAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEVTYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D + RI + G QIE+A+ +I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPSTDPNL-RIFTIRGLPPQIEVARHLIDEKVGGTSI 430
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQ--WGPRGS 401
+ G F Q + + P P Q + PR S
Sbjct: 431 GAP--GPFGQSPFS-QPPAAPHQNTFPPRSS 458
Score = 75 (31.5 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA-GQA 657
Q P +Q P PHQ +P +SG +P+ + + ++ P + P + Q G
Sbjct: 438 QSPFSQP--PAAPHQNTFPPRSSG----CFPNIAAKVNGNPHSAPVSGPPAFLTQGWGST 491
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNT-QQAYPEQPATSNA 700
+ QP QQ PS Q P + Y+ + Y +Q ++A
Sbjct: 492 YQAWQQPT-QQVPSQ-QSQPQSSQPDYSKAWEDYYKKQSHAASA 533
Score = 73 (30.8 bits), Expect = 5.5e-20, Sum P(3) = 5.5e-20
Identities = 36/138 (26%), Positives = 49/138 (35%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
Q P H N+ P S G + + P+ P G P
Sbjct: 443 QPPAAPHQNTFPPRSSGCFPN--IAAKVNGNPHSAPVSGP-PAFLTQGWGSTYQAWQQPT 499
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
QVPS QS P Q Y+ + S+ ++ AP + + PP + + Q
Sbjct: 500 QQVPSQQSQ----PQSSQPDYSKAWEDYYKKQSHAASAAPQA-STPPDYTMAWAEYYRQQ 554
Query: 658 VPNYPQPGGQ-QAPSYGQ 674
V Y Q GQ QAPS Q
Sbjct: 555 VAFYGQTLGQAQAPSQEQ 572
Score = 41 (19.5 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 413 QRGPYPSQNPHYPHLPYGNYPPQ 435
QR P PS +P+ PPQ
Sbjct: 391 QRNPPPSTDPNLRIFTIRGLPPQ 413
Score = 39 (18.8 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 731 AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY 771
+QP ++QP Y ++ Y Q AA+ + +P P Y
Sbjct: 507 SQPQSSQPDYSKAWED---YYKKQSHAASAAPQASTP-PDY 543
>UNIPROTKB|F1S0X8 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723
GeneTree:ENSGT00650000093048 OMA:AAPHQNT EMBL:CU914779
Ensembl:ENSSSCT00000006271 Uniprot:F1S0X8
Length = 548
Score = 237 (88.5 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 57/171 (33%), Positives = 98/171 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESI 134
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGETIK
Sbjct: 135 EQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQ--------ELLIPASKVGLVIGKGGETIK 186
Query: 320 GLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 187 QLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 213 (80.0 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 63/211 (29%), Positives = 104/211 (49%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEA-DAGGSPSL-VARGLATAQAS------GAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A + G L VARG + G +++ VP +K GL+IG
Sbjct: 312 HAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D R+ + G +QIE+A+ +I E + +
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPGL-RVFTIRGVPQQIEVARHLIDEKVGGSGL 430
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQ--WGPRGS 401
+ G F Q + + P P Q + PR S
Sbjct: 431 GAP--GAFGQSPFS-QPPAAPHQNTFPPRSS 458
Score = 75 (31.5 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 28/99 (28%), Positives = 40/99 (40%)
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA-GQA 657
Q P +Q P PHQ +P +SG +P+ + + + P + P + Q G
Sbjct: 438 QSPFSQP--PAAPHQNTFPPRSSG----CFPNIAAKVNGNPHGAPVSGPPAFLTQGWGST 491
Query: 658 VPNYPQPGGQQAPSYG-QVAPTAGYG-QYTNTQQAYPEQ 694
+ QP QQ PS+ AP A YT Y Q
Sbjct: 492 YQAWQQPA-QQVPSHAASAAPQASSPPDYTMAWAEYYRQ 529
>WB|WBGene00007534 [details] [associations]
symbol:C12D8.1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016246 "RNA
interference" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0016246
GO:GO:0003723 EMBL:Z73969 KO:K13210 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 HSSP:Q96AE4 HOGENOM:HOG000018892
GeneID:179423 KEGG:cel:CELE_C12D8.1 UCSC:C12D8.1b CTD:179423
NextBio:905322 PIR:T19217 RefSeq:NP_505633.1
ProteinModelPortal:Q17936 SMR:Q17936 IntAct:Q17936
MINT:MINT-1038809 STRING:Q17936 PRIDE:Q17936
EnsemblMetazoa:C12D8.1b WormBase:C12D8.1b InParanoid:Q17936
OMA:PERCAVI ArrayExpress:Q17936 Uniprot:Q17936
Length = 611
Score = 258 (95.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 57/169 (33%), Positives = 103/169 (60%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ K +P + VG++IG+ G I+ +Q +G ++Q++ DADP + R V + G+ SN+
Sbjct: 70 VNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMS--PDADPSSGVRMVTLEGSRSNV 127
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ A+ LIN V+A + P G AQ + ++I +P + GLIIG+ G+TI+
Sbjct: 128 ETAKHLINEVVARSQ-NPRPQY---GFPRAQTT-----IDIAIPPNRCGLIIGKSGDTIR 178
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
LQ +SG ++ L+ + D SK +R+TGD ++IE+A++++ E+L+
Sbjct: 179 QLQEKSGCKMILVQDNQSVSDQSKP--LRITGDPQKIELAKQLVAEILN 225
Score = 225 (84.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 77/250 (30%), Positives = 114/250 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D D DP R I+GT I +A
Sbjct: 252 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPD-D-DPSTPERCAVIMGTRDQIYRA 309
Query: 263 EKLINAVIAEA--DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ I ++ ++ GG ++ A A S A + VP K GL+IG+GGETIK
Sbjct: 310 TERITELVKKSTMQQGGGGNV-----AGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQ 364
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
+ + SGA +L P G+ E++ + G R IE A+ +I+ + + P+T
Sbjct: 365 INSESGAHCELSRD--PTGNAD-EKVFVIKGGKRAIEHAKHLIRIKVGD-IAPNTPFRDD 420
Query: 381 NQQAYRPR--VPT-----GPPQWGPRGSHPSQPM-AYD---YPQRGPYPSQNPHYPHLPY 429
+ + + P G QW P P+ Y + Q Y Q PY
Sbjct: 421 SAMTMQTQFSAPAQNNFGGQQQWNPVAQIPAAAQNPYQVGGWQQNSVYAQQTAAPAAAPY 480
Query: 430 ---GNYPPQQ 436
G PQQ
Sbjct: 481 AAAGIVQPQQ 490
Score = 223 (83.6 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 60/177 (33%), Positives = 92/177 (51%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I +P N+ G++IGK+GDTIR LQ SG K+ + +D + ++P+ I G I+ A+
Sbjct: 159 IAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD-NQSVSDQSKPLRITGDPQKIELAK 217
Query: 264 KLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+L+ ++ + D G L GA+ + E+ VP VG+IIG+ G+TIK L
Sbjct: 218 QLVAEILNSGGDGNGGSGLQMHH--AGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLA 275
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+G +IQ P P + ER + G QI A E I E+ V+ ST+ G
Sbjct: 276 METGTKIQFKPDDDPS---TPERCAVIMGTRDQIYRATERITEL----VKKSTMQQG 325
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
+P VG++IGRGG I+G+Q ++G R+Q+ P P S R+V + G +E A+
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPS---SGVRMVTLEGSRSNVETAKH 132
Query: 362 MIKEVLSQTVRP 373
+I EV++++ P
Sbjct: 133 LINEVVARSQNP 144
Score = 50 (22.7 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 47/187 (25%), Positives = 59/187 (31%)
Query: 535 APVQHPYGGHSNSQPV----------YSQGGLQSGYHQHQYGKPPYGMP--AQG-TQPQS 581
AP Q+ +GG PV Y GG Q Q P P A G QPQ
Sbjct: 431 APAQNNFGGQQQWNPVAQIPAAAQNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQ 490
Query: 582 YXXXXXXXXXXXXXYQSQVPSAQSYGPNV-PHQQQYPYATSGPTQQTYPSYGSAPAPDSY 640
Q A + P V P + Y S + Y S G+ +
Sbjct: 491 QVAYQQPQVVQQV--QPATTVAATTTPTVDPVTGEQDY--SAQWMEYYKSIGA------H 540
Query: 641 NQPPASAPGYPQQAGQAVPNYPQPGG--QQAPSYGQVAPTAGYGQYTNTQQAYPEQPATS 698
++ A ++ +A PGG QQ P G P TQ YP A
Sbjct: 541 DKAEAVEAQMKKKKAEAAARAVVPGGLIQQMPM-GMAMPQMSAQARVPTQN-YPAYSAAG 598
Query: 699 NAGYGYQ 705
A Y Q
Sbjct: 599 AAPYQAQ 605
Score = 49 (22.3 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 27/124 (21%), Positives = 36/124 (29%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
PN P + A + TQ + P+ + +N P A P Q P Y G Q
Sbjct: 413 PNTPFRDDS--AMTMQTQFSAPAQNNFGGQQQWN-PVAQIPAAAQN-----P-YQVGGWQ 463
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
Q Y Q Y P+Q Q Q TG+
Sbjct: 464 QNSVYAQQTAAPAAAPYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGE 523
Query: 728 PGYA 731
Y+
Sbjct: 524 QDYS 527
Score = 41 (19.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 378 GGFNQQ---AYRPRVPTGPPQWGPRGSHPSQPMAYDYPQ 413
GG+ Q A + P P P Q +AY PQ
Sbjct: 460 GGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQVAYQQPQ 498
>UNIPROTKB|Q17936 [details] [associations]
symbol:C12D8.1 "Protein C12D8.1, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0016246 GO:GO:0003723
EMBL:Z73969 KO:K13210 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 HSSP:Q96AE4 HOGENOM:HOG000018892
GeneID:179423 KEGG:cel:CELE_C12D8.1 UCSC:C12D8.1b CTD:179423
NextBio:905322 PIR:T19217 RefSeq:NP_505633.1
ProteinModelPortal:Q17936 SMR:Q17936 IntAct:Q17936
MINT:MINT-1038809 STRING:Q17936 PRIDE:Q17936
EnsemblMetazoa:C12D8.1b WormBase:C12D8.1b InParanoid:Q17936
OMA:PERCAVI ArrayExpress:Q17936 Uniprot:Q17936
Length = 611
Score = 258 (95.9 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 57/169 (33%), Positives = 103/169 (60%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ K +P + VG++IG+ G I+ +Q +G ++Q++ DADP + R V + G+ SN+
Sbjct: 70 VNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMS--PDADPSSGVRMVTLEGSRSNV 127
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ A+ LIN V+A + P G AQ + ++I +P + GLIIG+ G+TI+
Sbjct: 128 ETAKHLINEVVARSQ-NPRPQY---GFPRAQTT-----IDIAIPPNRCGLIIGKSGDTIR 178
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
LQ +SG ++ L+ + D SK +R+TGD ++IE+A++++ E+L+
Sbjct: 179 QLQEKSGCKMILVQDNQSVSDQSKP--LRITGDPQKIELAKQLVAEILN 225
Score = 225 (84.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 77/250 (30%), Positives = 114/250 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D D DP R I+GT I +A
Sbjct: 252 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPD-D-DPSTPERCAVIMGTRDQIYRA 309
Query: 263 EKLINAVIAEA--DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ I ++ ++ GG ++ A A S A + VP K GL+IG+GGETIK
Sbjct: 310 TERITELVKKSTMQQGGGGNV-----AGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQ 364
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
+ + SGA +L P G+ E++ + G R IE A+ +I+ + + P+T
Sbjct: 365 INSESGAHCELSRD--PTGNAD-EKVFVIKGGKRAIEHAKHLIRIKVGD-IAPNTPFRDD 420
Query: 381 NQQAYRPR--VPT-----GPPQWGPRGSHPSQPM-AYD---YPQRGPYPSQNPHYPHLPY 429
+ + + P G QW P P+ Y + Q Y Q PY
Sbjct: 421 SAMTMQTQFSAPAQNNFGGQQQWNPVAQIPAAAQNPYQVGGWQQNSVYAQQTAAPAAAPY 480
Query: 430 ---GNYPPQQ 436
G PQQ
Sbjct: 481 AAAGIVQPQQ 490
Score = 223 (83.6 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 60/177 (33%), Positives = 92/177 (51%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I +P N+ G++IGK+GDTIR LQ SG K+ + +D + ++P+ I G I+ A+
Sbjct: 159 IAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD-NQSVSDQSKPLRITGDPQKIELAK 217
Query: 264 KLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+L+ ++ + D G L GA+ + E+ VP VG+IIG+ G+TIK L
Sbjct: 218 QLVAEILNSGGDGNGGSGLQMHH--AGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLA 275
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+G +IQ P P + ER + G QI A E I E+ V+ ST+ G
Sbjct: 276 METGTKIQFKPDDDPS---TPERCAVIMGTRDQIYRATERITEL----VKKSTMQQG 325
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
+P VG++IGRGG I+G+Q ++G R+Q+ P P S R+V + G +E A+
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPS---SGVRMVTLEGSRSNVETAKH 132
Query: 362 MIKEVLSQTVRP 373
+I EV++++ P
Sbjct: 133 LINEVVARSQNP 144
Score = 50 (22.7 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 47/187 (25%), Positives = 59/187 (31%)
Query: 535 APVQHPYGGHSNSQPV----------YSQGGLQSGYHQHQYGKPPYGMP--AQG-TQPQS 581
AP Q+ +GG PV Y GG Q Q P P A G QPQ
Sbjct: 431 APAQNNFGGQQQWNPVAQIPAAAQNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQ 490
Query: 582 YXXXXXXXXXXXXXYQSQVPSAQSYGPNV-PHQQQYPYATSGPTQQTYPSYGSAPAPDSY 640
Q A + P V P + Y S + Y S G+ +
Sbjct: 491 QVAYQQPQVVQQV--QPATTVAATTTPTVDPVTGEQDY--SAQWMEYYKSIGA------H 540
Query: 641 NQPPASAPGYPQQAGQAVPNYPQPGG--QQAPSYGQVAPTAGYGQYTNTQQAYPEQPATS 698
++ A ++ +A PGG QQ P G P TQ YP A
Sbjct: 541 DKAEAVEAQMKKKKAEAAARAVVPGGLIQQMPM-GMAMPQMSAQARVPTQN-YPAYSAAG 598
Query: 699 NAGYGYQ 705
A Y Q
Sbjct: 599 AAPYQAQ 605
Score = 49 (22.3 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 27/124 (21%), Positives = 36/124 (29%)
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
PN P + A + TQ + P+ + +N P A P Q P Y G Q
Sbjct: 413 PNTPFRDDS--AMTMQTQFSAPAQNNFGGQQQWN-PVAQIPAAAQN-----P-YQVGGWQ 463
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQ 727
Q Y Q Y P+Q Q Q TG+
Sbjct: 464 QNSVYAQQTAAPAAAPYAAAGIVQPQQQVAYQQPQVVQQVQPATTVAATTTPTVDPVTGE 523
Query: 728 PGYA 731
Y+
Sbjct: 524 QDYS 527
Score = 41 (19.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 378 GGFNQQ---AYRPRVPTGPPQWGPRGSHPSQPMAYDYPQ 413
GG+ Q A + P P P Q +AY PQ
Sbjct: 460 GGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQVAYQQPQ 498
>UNIPROTKB|G3V829 [details] [associations]
symbol:Fubp3 "RCG45587" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307004 GO:GO:0003723 EMBL:CH474001
InterPro:IPR015096 Pfam:PF09005 GeneTree:ENSGT00650000093048
EMBL:AC108321 Ensembl:ENSRNOT00000021871 Uniprot:G3V829
Length = 569
Score = 235 (87.8 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 57/171 (33%), Positives = 98/171 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESI 134
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGETIK
Sbjct: 135 EQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------ELLIPASKVGLVIGKGGETIK 186
Query: 320 GLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 187 QLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 227 (85.0 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 68/227 (29%), Positives = 107/227 (47%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEADA----GGSPSLVARGLATAQAS----GAAEQVEIKVPNEKVGLIIG 312
A ++IN +I A GG RG S G +++ VP +K GL+IG
Sbjct: 312 HAARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE-VLSQTV 371
+GGE IK + +SGA ++L P D + RI + G +QIE+A+ +I E V ++
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNL-RIFTIRGAPQQIEVARHLIDEKVGGASL 430
Query: 372 RPSTLSGG--FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGP 416
T G F+Q P T PP+ P + + P GP
Sbjct: 431 GAPTAFGQSPFSQPPAAPHQNTFPPRAFPNIAAKVNGNPHSTPVSGP 477
Score = 65 (27.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 27/104 (25%), Positives = 44/104 (42%)
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA-GQA 657
Q P +Q P PHQ +P P + +P+ + + ++ P + P + Q G
Sbjct: 438 QSPFSQP--PAAPHQNTFP-----P--RAFPNIAAKVNGNPHSTPVSGPPAFLTQGWGST 488
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNT-QQAYPEQPATSNA 700
+ QP QQ PS Q P Y+ + Y +Q T++A
Sbjct: 489 YQAWQQPT-QQVPSQ-QSQPQNSQPDYSKAWEDYYKKQGHTTSA 530
Score = 54 (24.1 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 38/138 (27%), Positives = 50/138 (36%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
Q P H N+ P + + + + + + P G PA TQ +
Sbjct: 443 QPPAAPHQNTFPPRAFPNIAAKVNGNPHSTPVSGPPAFLTQ--GWGSTYQAWQQPTQQVP 500
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
SQ Q+ P+ + Y G T P S+P PD Y A A Y QQA
Sbjct: 501 SQQSQPQNSQPDYSKAWEDYYKKQGHTTSAAPQ-ASSP-PD-YTM--AWAEYYRQQAAF- 554
Query: 658 VPNYPQPGGQ-QAPSYGQ 674
Y Q GQ QA S Q
Sbjct: 555 ---YGQTLGQAQAHSQEQ 569
Score = 48 (22.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 27/103 (26%), Positives = 37/103 (35%)
Query: 608 PNVPHQQQ-YPYAT--SGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQP 664
PN+ + P++T SGP +GS ++ QP P Q + P+Y +
Sbjct: 459 PNIAAKVNGNPHSTPVSGPPAFLTQGWGSTY--QAWQQPTQQVPSQQSQPQNSQPDYSKA 516
Query: 665 GGQQAPSYGQV---APTAGYG-QYTNTQQAYPEQPATSNAGYG 703
G AP A YT Y Q A A YG
Sbjct: 517 WEDYYKKQGHTTSAAPQASSPPDYTMAWAEYYRQQA---AFYG 556
>RGD|1307004 [details] [associations]
symbol:Fubp3 "far upstream element (FUSE) binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307004 GO:GO:0003723 eggNOG:NOG300923
HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 CTD:8939 OrthoDB:EOG4X97H1
EMBL:DQ144645 IPI:IPI00394110 RefSeq:NP_001034426.1
UniGene:Rn.199412 ProteinModelPortal:Q2QC85 SMR:Q2QC85
GeneID:362106 KEGG:rno:362106 UCSC:RGD:1307004 InParanoid:Q2QC85
NextBio:678673 Genevestigator:Q2QC85 Uniprot:Q2QC85
Length = 569
Score = 235 (87.8 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 57/171 (33%), Positives = 98/171 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESI 134
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGETIK
Sbjct: 135 EQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------ELLIPASKVGLVIGKGGETIK 186
Query: 320 GLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 187 QLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 226 (84.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 68/227 (29%), Positives = 106/227 (46%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q +G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNGTGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEADA----GGSPSLVARGLATAQAS----GAAEQVEIKVPNEKVGLIIG 312
A ++IN +I A GG RG S G +++ VP +K GL+IG
Sbjct: 312 HAARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE-VLSQTV 371
+GGE IK + +SGA ++L P D + RI + G +QIE+A+ +I E V ++
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNL-RIFTIRGAPQQIEVARHLIDEKVGGASL 430
Query: 372 RPSTLSGG--FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGP 416
T G F+Q P T PP+ P + + P GP
Sbjct: 431 GAPTAFGQSPFSQPPAAPHQNTFPPRAFPNIAAKVNGNPHSTPVSGP 477
Score = 65 (27.9 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 27/104 (25%), Positives = 44/104 (42%)
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA-GQA 657
Q P +Q P PHQ +P P + +P+ + + ++ P + P + Q G
Sbjct: 438 QSPFSQP--PAAPHQNTFP-----P--RAFPNIAAKVNGNPHSTPVSGPPAFLTQGWGST 488
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNT-QQAYPEQPATSNA 700
+ QP QQ PS Q P Y+ + Y +Q T++A
Sbjct: 489 YQAWQQPT-QQVPSQ-QSQPQNSQPDYSKAWEDYYKKQGHTTSA 530
Score = 54 (24.1 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 38/138 (27%), Positives = 50/138 (36%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
Q P H N+ P + + + + + + P G PA TQ +
Sbjct: 443 QPPAAPHQNTFPPRAFPNIAAKVNGNPHSTPVSGPPAFLTQ--GWGSTYQAWQQPTQQVP 500
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
SQ Q+ P+ + Y G T P S+P PD Y A A Y QQA
Sbjct: 501 SQQSQPQNSQPDYSKAWEDYYKKQGHTTSAAPQ-ASSP-PD-YTM--AWAEYYRQQAAF- 554
Query: 658 VPNYPQPGGQ-QAPSYGQ 674
Y Q GQ QA S Q
Sbjct: 555 ---YGQTLGQAQAHSQEQ 569
Score = 48 (22.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 27/103 (26%), Positives = 37/103 (35%)
Query: 608 PNVPHQQQ-YPYAT--SGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQP 664
PN+ + P++T SGP +GS ++ QP P Q + P+Y +
Sbjct: 459 PNIAAKVNGNPHSTPVSGPPAFLTQGWGSTY--QAWQQPTQQVPSQQSQPQNSQPDYSKA 516
Query: 665 GGQQAPSYGQV---APTAGYG-QYTNTQQAYPEQPATSNAGYG 703
G AP A YT Y Q A A YG
Sbjct: 517 WEDYYKKQGHTTSAAPQASSPPDYTMAWAEYYRQQA---AFYG 556
>UNIPROTKB|F1NGC0 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723
GeneTree:ENSGT00650000093048 OMA:AAPHQNT EMBL:AADN02026565
EMBL:AADN02026566 EMBL:AADN02026567 EMBL:AADN02026568
EMBL:AADN02026569 EMBL:AADN02026570 IPI:IPI00578263
Ensembl:ENSGALT00000039554 ArrayExpress:F1NGC0 Uniprot:F1NGC0
Length = 539
Score = 240 (89.5 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 59/170 (34%), Positives = 98/170 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT +I
Sbjct: 96 ITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPE---RPCVLTGTPESI 152
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETIK
Sbjct: 153 EQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGETIK 204
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I Q P G+ ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 205 QLQERTGVKMIMI-QDGPMPTGA-DKPLRITGDAFKVQQAREMVLEIIRE 252
Score = 240 (89.5 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 67/207 (32%), Positives = 105/207 (50%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 273 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RVAQVMGLPDRCQ 329
Query: 261 KAEKLINAVIAEA-DAGGSPSL-VARGLATAQAS------GAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A + G SL VARG + G +++ VP +K GL+IG
Sbjct: 330 HAAHIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLVIG 389
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E + T
Sbjct: 390 KGGENIKSINQQSGAHVELQRNPPPNTDPGV-RIFTIRGVPQQIELARHLIDEKVGGTSM 448
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPR 399
GGF Q + + PT P Q GP+
Sbjct: 449 GGP--GGFGQSPFN-QAPTTPHQNGPQ 472
Score = 57 (25.1 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 23/70 (32%), Positives = 27/70 (38%)
Query: 622 GPTQQTYPSYGSAPAPDSYNQPPA-SAPGYP------QQAGQAVPNYPQPGGQQAPSYGQ 674
GP + AP N P A G+ QQ GQ VPN + G Q S GQ
Sbjct: 450 GPGGFGQSPFNQAPTTPHQNGPQAFMTQGWGSTYQTWQQPGQQVPN--KSGSAQISSSGQ 507
Query: 675 VAPTAGYGQY 684
V T + Y
Sbjct: 508 VEFTKAWEDY 517
>UNIPROTKB|F1NYJ3 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:AADN02026565
EMBL:AADN02026566 EMBL:AADN02026567 EMBL:AADN02026568
EMBL:AADN02026569 EMBL:AADN02026570 IPI:IPI00819889
Ensembl:ENSGALT00000006277 ArrayExpress:F1NYJ3 Uniprot:F1NYJ3
Length = 508
Score = 240 (89.5 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 59/170 (34%), Positives = 98/170 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT +I
Sbjct: 67 ITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPE---RPCVLTGTPESI 123
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETIK
Sbjct: 124 EQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGETIK 175
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I Q P G+ ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 176 QLQERTGVKMIMI-QDGPMPTGA-DKPLRITGDAFKVQQAREMVLEIIRE 223
Score = 240 (89.5 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 67/207 (32%), Positives = 105/207 (50%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 244 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RVAQVMGLPDRCQ 300
Query: 261 KAEKLINAVIAEA-DAGGSPSL-VARGLATAQAS------GAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A + G SL VARG + G +++ VP +K GL+IG
Sbjct: 301 HAAHIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLVIG 360
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E + T
Sbjct: 361 KGGENIKSINQQSGAHVELQRNPPPNTDPGV-RIFTIRGVPQQIELARHLIDEKVGGTSM 419
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPR 399
GGF Q + + PT P Q GP+
Sbjct: 420 GGP--GGFGQSPFN-QAPTTPHQNGPQ 443
Score = 54 (24.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 19/73 (26%), Positives = 29/73 (39%)
Query: 622 GPTQQTYPS-YGSAPAPDSYNQPPASAP-GYPQQA-GQAVPNYPQPGGQQAPSYGQVAPT 678
G T P +G +P + P + P + Q G + QPG QQ PS
Sbjct: 415 GGTSMGGPGGFGQSPFNQAPTTPHQNGPQAFMTQGWGSTYQTWQQPG-QQVPSKYHNGTQ 473
Query: 679 AGYGQYTNTQQAY 691
+G ++T + Y
Sbjct: 474 SGQVEFTKAWEDY 486
>UNIPROTKB|F1PEW1 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048
OMA:AAPHQNT EMBL:AAEX03006837 EMBL:AAEX03006838
Ensembl:ENSCAFT00000031728 Uniprot:F1PEW1
Length = 547
Score = 244 (91.0 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 71/223 (31%), Positives = 111/223 (49%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEA-DAGGSPSL-VARGLATAQ------ASGAAEQVEIKVPNEKVGLIIG 312
A +IN +I A + G L VARG + A G +++ VP +K GL+IG
Sbjct: 312 HAAHVINELILTAQERDGFGGLTVARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GG+ IK + +SGA ++L P D + RI + G +QIE+A+ +I E + T
Sbjct: 372 KGGDNIKSINQQSGAHVELQRNPPPNTDPNL-RIFTIRGIPQQIEVARHLIDEKVGGTSL 430
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG 415
+ G F Q + + P P Q GP S P +PQRG
Sbjct: 431 GAP--GAFGQSPFS-QPPAAPHQKGPALLATSNP---HWPQRG 467
Score = 237 (88.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 58/171 (33%), Positives = 98/171 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESI 134
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETIK
Sbjct: 135 EQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGETIK 186
Query: 320 GLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 187 QLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 53 (23.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 26/98 (26%), Positives = 37/98 (37%)
Query: 599 QVPSAQSYGPNVPHQQQYPY-ATSGP--TQQTYPS-YGSAPAPDSYNQPPASAPGYPQQA 654
Q P +Q P PHQ+ ATS P Q+ + G +QPP+S P Y +A
Sbjct: 438 QSPFSQP--PAAPHQKGPALLATSNPHWPQRGWQRPVGRVKENSQQSQPPSSQPDY-SKA 494
Query: 655 GQAVPNYPQPGGQQAPSYGQVAP-TAGYGQYTNTQQAY 691
+ AP T + +Y Q A+
Sbjct: 495 WEDYYKKQSHAASAAPQASSPPDYTMAWAEYYRQQVAF 532
Score = 42 (19.8 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 731 AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY 771
+QP ++QP Y ++ Y Q AA+ + SP P Y
Sbjct: 482 SQPPSSQPDYSKAWED---YYKKQSHAASAAPQASSP-PDY 518
>FB|FBgn0014870 [details] [associations]
symbol:Psi "P-element somatic inhibitor" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IMP;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005685
"U1 snRNP" evidence=IPI] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IDA] [GO:0048024 "regulation of mRNA splicing, via
spliceosome" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003729
GO:GO:0006397 GO:GO:0007283 GO:GO:0048025 GO:GO:0000381
EMBL:AL031863 InterPro:IPR015096 Pfam:PF09005 HSSP:Q96AE4
FlyBase:FBgn0014870 PIR:T13690 ProteinModelPortal:O96828 SMR:O96828
STRING:O96828 PRIDE:O96828 InParanoid:O96828 ArrayExpress:O96828
Bgee:O96828 Uniprot:O96828
Length = 806
Score = 216 (81.1 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 54/178 (30%), Positives = 96/178 (53%)
Query: 203 KIEVPNNKVGVLIGKAG-DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G + K
Sbjct: 138 QIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQRDTVTK 190
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
++I + A G L+ + SG EI +P KVGL+IG+GG+TIK L
Sbjct: 191 GREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGDTIKQL 250
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
Q ++GA++ +I Q P + K +R++G+ ++IE A++M+ ++++Q GG
Sbjct: 251 QEKTGAKMIII-QDGPNQELIKP--LRISGEAQKIEHAKQMVLDLIAQKDAQGQQQGG 305
Score = 202 (76.2 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 56/181 (30%), Positives = 91/181 (50%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 227 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQE--LIKPLRISGEAQKIEH 284
Query: 262 AEKLINAVIAEADA----------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
A++++ +IA+ DA GG G E E+ VP VG++I
Sbjct: 285 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 344
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPE-GDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+GG+ I+ +QT G ++Q I E GD R V + G +Q++ A+ I ++
Sbjct: 345 GKGGDMIRKIQTECGCKLQFIQGKNDEMGD---RRCV-IQGTRQQVDDAKRTIDGLIENV 400
Query: 371 V 371
+
Sbjct: 401 M 401
Score = 149 (57.5 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 66/255 (25%), Positives = 107/255 (41%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 330 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 387
Query: 261 KAEKLINAVIAEADAGG------SPSLVARGLATAQASGAAEQVEIKVPNEKVG------ 308
A++ I+ +I + +L + + + Q + P ++
Sbjct: 388 DAKRTIDGLIENVMVSRKYFIKEANTLPMSDVIATKWHESKWQWRRRWPRRRLWQLQLRL 447
Query: 309 -LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
++IGRGGETIK + +SGA ++ + E++ + G Q+E A++MI E +
Sbjct: 448 WIVIGRGGETIKLINQQSGAHTEMDRN---ASNPPNEKLFKSKGTTDQVEAARQMISEKI 504
Query: 368 SQ---TVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMA-Y--DYPQRGPYPSQN 421
+ + + GG P G G SH +Q Y +G P+
Sbjct: 505 NMELNVISRKPIGGG-------PGGGGGNSGGGQNNSHHNQQQGGYGGQNQMQGGDPNSG 557
Query: 422 PHYPHLPYGNYPPQQ 436
Y P+G QQ
Sbjct: 558 AGYQQQPWGGPYGQQ 572
Score = 81 (33.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 60/245 (24%), Positives = 79/245 (32%)
Query: 542 GGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVP 601
GG +NS QGG G +Q Q G P G G Q Q + Q Q+
Sbjct: 529 GGQNNSHHNQQQGGY-GGQNQMQGGDPNSGA---GYQQQPWGGPYGQQGWDPSGQQQQMA 584
Query: 602 SAQSYGP---NVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
A G Q Y S + Y G + Q + Q G +
Sbjct: 585 MANQGGSAAGGASGGQDY----SAQWIEYYKQMGCHREAEMIEQQMKAK----QAGGSSG 636
Query: 659 PNYPQPGGQQAPSYGQVAPT-AGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
P Q QQ S Q AG Y+ Y + T
Sbjct: 637 PVQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEYYRSVGKIEEAEAIEKT---LKNKQQN 693
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDST 777
T P P QP+ +A+ + A A AA GYG++++P Y QY +
Sbjct: 694 GSGGQSSTPNPSQGGPGQQQPN--PAAAAAAA--AAAAAAAGGYGQSMTPTQ-YAQY--S 746
Query: 778 QMYAA 782
Q YAA
Sbjct: 747 QYYAA 751
Score = 67 (28.6 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 67/255 (26%), Positives = 84/255 (32%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQP-QSYXXXXXXXXXXXXXY 596
Q P+GG P QG SG Q G A G Q Y +
Sbjct: 562 QQPWGG-----PYGQQGWDPSGQQQQMAMANQGGSAAGGASGGQDYSAQWIEYYKQMGCH 616
Query: 597 ------QSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS-YGSAPAPDSYNQPPASAPG 649
+ Q+ + Q+ G + P QQQ P QQT + G A + + S G
Sbjct: 617 REAEMIEQQMKAKQAGGSSGPVQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEYYRSV-G 675
Query: 650 YPQQAG---QAVPNYPQ--PGGQQA-PSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG-Y 702
++A + + N Q GGQ + P+ Q P G Q A A + AG Y
Sbjct: 676 KIEEAEAIEKTLKNKQQNGSGGQSSTPNPSQGGP--GQQQPNPAAAAAAAAAAAAAAGGY 733
Query: 703 GYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAY-GVAQGTAAAGY 761
G T GQP A QP QS Y G G AGY
Sbjct: 734 GQSMTPTQYAQYSQYYAAAAAAGGQP----QGAPQPGGGQSGGPPGNYPGNYPG---AGY 786
Query: 762 GKTVSPQPGYPQYDS 776
G PG Q S
Sbjct: 787 GGYPGA-PGQQQQKS 800
Score = 55 (24.4 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 19/72 (26%), Positives = 27/72 (37%)
Query: 377 SGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNP-HYPHLPYGNY 432
+GG+ Q + + + QP P Q G P P +YP YG Y
Sbjct: 730 AGGYGQSMTPTQYAQYSQYYAAAAAAGGQPQGAPQPGGGQSGGPPGNYPGNYPGAGYGGY 789
Query: 433 P--PQQMAPRSN 442
P P Q +S+
Sbjct: 790 PGAPGQQQQKSH 801
Score = 42 (19.8 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 377 SG-GFNQQAYRPRVPTGPPQWGPRGSHPSQPMA 408
SG G+ QQ + P G W P G MA
Sbjct: 556 SGAGYQQQPWGG--PYGQQGWDPSGQQQQMAMA 586
>UNIPROTKB|J9P1I9 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048
EMBL:AAEX03006837 EMBL:AAEX03006838 Ensembl:ENSCAFT00000048747
Uniprot:J9P1I9
Length = 487
Score = 237 (88.5 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 58/171 (33%), Positives = 98/171 (57%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESI 134
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETIK
Sbjct: 135 EQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGETIK 186
Query: 320 GLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 187 QLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 226 (84.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 66/211 (31%), Positives = 106/211 (50%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEA-DAGGSPSL-VARGLATAQ------ASGAAEQVEIKVPNEKVGLIIG 312
A +IN +I A + G L VARG + A G +++ VP +K GL+IG
Sbjct: 312 HAAHVINELILTAQERDGFGGLTVARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GG+ IK + +SGA ++L P D + RI + G +QIE+A+ +I E + T
Sbjct: 372 KGGDNIKSINQQSGAHVELQRNPPPNTDPNL-RIFTIRGIPQQIEVARHLIDEKVGGTSL 430
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQ--WGPRGS 401
+ G F Q + + P P Q + PR S
Sbjct: 431 GAP--GAFGQSPFS-QPPAAPHQNTFPPRSS 458
Score = 43 (20.2 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 599 QVPSAQSYGPNVPHQQQYPYATSG 622
Q P +Q P PHQ +P +SG
Sbjct: 438 QSPFSQP--PAAPHQNTFPPRSSG 459
>ZFIN|ZDB-GENE-041121-12 [details] [associations]
symbol:zgc:101598 "zgc:101598" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-041121-12 GO:GO:0003723
eggNOG:NOG300923 HOGENOM:HOG000231552 HOVERGEN:HBG000625 KO:K13210
InterPro:IPR015096 Pfam:PF09005 OrthoDB:EOG4X97H1 EMBL:BC085379
IPI:IPI00487369 RefSeq:NP_001007777.1 UniGene:Dr.76973
ProteinModelPortal:Q5RKQ3 SMR:Q5RKQ3 STRING:Q5RKQ3 GeneID:493616
KEGG:dre:493616 InParanoid:Q5RKQ3 NextBio:20865427
ArrayExpress:Q5RKQ3 Uniprot:Q5RKQ3
Length = 572
Score = 231 (86.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 57/179 (31%), Positives = 101/179 (56%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ +VP+ VG +IG+ G+ I +Q S KIQI D+ RP + GT +I
Sbjct: 84 ITEDFKVPDKMVGFIIGRGGEQITRIQLESNCKIQIAADSGG---MMDRPCTLTGTPESI 140
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
++A++L+ ++ G P +Q G++ EI +P KVGL+IG+GG+TIK
Sbjct: 141 EQAKRLLGQIVDRCRNG--PGF------HSQMDGSSAVQEILIPASKVGLVIGKGGDTIK 192
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
LQ R+G ++ +I Q P GS ++ +R++GD +++ A+E++ E++ + + SG
Sbjct: 193 QLQERTGVKMIMI-QDDPMPTGS-DKPLRISGDPYKVQQARELVVEIIREKDQGDFRSG 249
Score = 228 (85.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 61/179 (34%), Positives = 97/179 (54%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +KVG++IGK GDTI+ LQ +G K+ + +D D P + +P+ I G + +
Sbjct: 171 QEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQD-DPMPTGSDKPLRISGDPYKVQQ 229
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +L+ +I E D G S G + S +++ VP VG++IGR GE IK +
Sbjct: 230 ARELVVEIIREKDQGDFRS----GRSDF-GSRLGSSIDVAVPRFAVGIVIGRNGEMIKKI 284
Query: 322 QTRSGARIQLIPQHLPEGDG-SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
Q +G RIQ P DG S +R+ +V G + + A +I E++ QT + GG
Sbjct: 285 QNDAGVRIQFKPD-----DGISPDRVAQVMGQPERCQHAVHLINELV-QTAQERDGFGG 337
Score = 216 (81.1 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 64/228 (28%), Positives = 105/228 (46%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G A
Sbjct: 263 VAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPD---RVAQVMGQPERCQHAV 319
Query: 264 KLINAVIA---EADAGGSPSLVARGLATAQAS------GAAEQVEIKVPNEKVGLIIGRG 314
LIN ++ E D G P L RG + G ++V +P +K GL+IG+G
Sbjct: 320 HLINELVQTAQERDGFGGP-LGPRGRGRGRGDWNIGTPGGLQEVTYTIPADKCGLVIGKG 378
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GETIK + +SGA ++L ++ P R + G +Q+E+A+++I + + +
Sbjct: 379 GETIKNINQQSGAHVEL-QRNPPPNTDPNVRTFSIRGSPQQMEMARQLIDDKIGASGMGG 437
Query: 375 TLSGGFNQQAYRPRVP-TGPPQWGPRGSHPSQPMAYDYPQRGPYPSQN 421
S G + P P PQ G + + PQ PS N
Sbjct: 438 NSSFGLSPFTQGPATPHQNGPQTFMTGGWGTTYQTWQ-PQSQQDPSHN 484
Score = 51 (23.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 30/111 (27%), Positives = 41/111 (36%)
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAG 655
YQ+ P +Q P+ Q S +Q Y G NQ +S P Y +
Sbjct: 470 YQTWQPQSQQ-DPSHNGSQSGQMDYSKAWEQYYKKLGQQ------NQGQSSGPDYSKAWE 522
Query: 656 QAVPNYPQ---PGGQQA--PSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG 701
+ Q PG QQ+ P Y +A + +Y Q AY Q T G
Sbjct: 523 EYYKKQTQAAGPGSQQSSPPDY-----SAAWVEYYRQQGAYYGQGQTQAPG 568
>UNIPROTKB|Q7JPS0 [details] [associations]
symbol:Psi "PSI" species:7242 "Drosophila sp." [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0048024 "regulation
of mRNA splicing, via spliceosome" evidence=IMP] [GO:0048025
"negative regulation of mRNA splicing, via spliceosome"
evidence=IDA;IMP] [GO:0005685 "U1 snRNP" evidence=IPI]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0003729 GO:GO:0006397
GO:GO:0007283 GO:GO:0048025 GO:GO:0000381 InterPro:IPR015096
Pfam:PF09005 PDB:2BN5 PDBsum:2BN5 FlyBase:FBgn0014870 EMBL:S75665
PDB:2BN6 PDBsum:2BN6 ProteinModelPortal:Q7JPS0 SMR:Q7JPS0
InParanoid:Q7JPS0 EvolutionaryTrace:Q7JPS0 Uniprot:Q7JPS0
Length = 796
Score = 216 (81.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 54/178 (30%), Positives = 96/178 (53%)
Query: 203 KIEVPNNKVGVLIGKAG-DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G + K
Sbjct: 125 QIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQRDTVTK 177
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
++I + A G L+ + SG EI +P KVGL+IG+GG+TIK L
Sbjct: 178 GREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGDTIKQL 237
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
Q ++GA++ +I Q P + K +R++G+ ++IE A++M+ ++++Q GG
Sbjct: 238 QEKTGAKMIII-QDGPNQELIKP--LRISGEAQKIEHAKQMVLDLIAQKDAQGQQQGG 292
Score = 208 (78.3 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 60/207 (28%), Positives = 101/207 (48%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 214 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQE--LIKPLRISGEAQKIEH 271
Query: 262 AEKLINAVIAEADA----------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
A++++ +IA+ DA GG G E E+ VP VG++I
Sbjct: 272 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 331
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPE-GDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+GG+ I+ +QT G ++Q I E GD R V + G +Q++ A+ I ++
Sbjct: 332 GKGGDMIRKIQTECGCKLQFIQGKNDEMGD---RRCV-IQGTRQQVDDAKRTIDGLIENV 387
Query: 371 VRPSTLSGGFNQQAYRPRVPTGPPQWG 397
++ + ++ N P +G +G
Sbjct: 388 MQRNGMNRNGNGGGGGPGGDSGNSNYG 414
Score = 180 (68.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 71/257 (27%), Positives = 107/257 (41%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR---DADADPHAATRPV--EIIGT 255
S ++ VP VGV+IGK GD IR +Q G K+Q + D D + ++
Sbjct: 317 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDDA 376
Query: 256 LSNIDKA-EKLI--NAVIAEADAGGS-P------SLVARGLATAQASGAAEQVEIKVPNE 305
ID E ++ N + + GG P S G A G E++ VP
Sbjct: 377 KRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVPAS 436
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K G++IGRGGETIK + +SGA ++ + E++ + G Q+E A++MI E
Sbjct: 437 KCGIVIGRGGETIKLINQQSGAHTEMDRN---ASNPPNEKLFKSKGTTDQVEAARQMISE 493
Query: 366 VLSQ---TVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMA-Y--DYPQRGPYPS 419
++ + + GG P G G SH +Q Y +G P+
Sbjct: 494 KINMELNVISRKPIGGG-------PGGGGGNSGGGQNNSHHNQQQGGYGGQNQMQGGDPN 546
Query: 420 QNPHYPHLPYGNYPPQQ 436
Y P+G QQ
Sbjct: 547 SGAGYQQQPWGGPYGQQ 563
Score = 72 (30.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 59/245 (24%), Positives = 78/245 (31%)
Query: 542 GGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVP 601
GG +NS QGG G +Q Q G P G G Q Q + Q Q+
Sbjct: 520 GGQNNSHHNQQQGGY-GGQNQMQGGDPNSGA---GYQQQPWGGPYGQQGWDPSGQQQQMA 575
Query: 602 SAQSYGP---NVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
A G Q Y S + Y G + Q + Q G +
Sbjct: 576 MANQGGSAAGGASGGQDY----SAQWIEYYKQMGCHREAEMIEQQMKAK----QAGGSSG 627
Query: 659 PNYPQPGGQQAPSYGQVAPT-AGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
P Q QQ S Q AG Y+ Y + T
Sbjct: 628 PVQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEYYRSVGKIEEAEAIEKT----LKNKQN 683
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDST 777
T P QP+ +A+ + A A AA GYG++++P Y QY +
Sbjct: 684 GSGGQSSTPNPSQGGSGQQQPN--PAAAAAAA--AAAAAAAGGYGQSMTPTQ-YAQY--S 736
Query: 778 QMYAA 782
Q YAA
Sbjct: 737 QYYAA 741
Score = 61 (26.5 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 66/256 (25%), Positives = 85/256 (33%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQP-QSYXXXXXXXXXXXXXY 596
Q P+GG P QG SG Q G A G Q Y +
Sbjct: 553 QQPWGG-----PYGQQGWDPSGQQQQMAMANQGGSAAGGASGGQDYSAQWIEYYKQMGCH 607
Query: 597 ------QSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS-YGSAPAPDSYNQPPASAPG 649
+ Q+ + Q+ G + P QQQ P QQT + G A + + S G
Sbjct: 608 REAEMIEQQMKAKQAGGSSGPVQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEYYRSV-G 666
Query: 650 YPQQAGQAVPNYPQPGGQQAPSYGQVA-PTAGYGQYTNTQQAYPEQPATSNA-------G 701
++A +A+ + +Q S GQ + P G + QQ P A + A G
Sbjct: 667 KIEEA-EAIEKTLK--NKQNGSGGQSSTPNPSQGG-SGQQQPNPAAAAAAAAAAAAAAGG 722
Query: 702 YGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAY-GVAQGTAAAG 760
YG T GQP A QP QS Y G G AG
Sbjct: 723 YGQSMTPTQYAQYSQYYAAAAAAGGQP----QGAPQPGGGQSGGPPGNYPGNYPG---AG 775
Query: 761 YGKTVSPQPGYPQYDS 776
YG PG Q S
Sbjct: 776 YGGYPGA-PGQQQQKS 790
Score = 55 (24.4 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 19/72 (26%), Positives = 27/72 (37%)
Query: 377 SGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPYPSQNP-HYPHLPYGNY 432
+GG+ Q + + + QP P Q G P P +YP YG Y
Sbjct: 720 AGGYGQSMTPTQYAQYSQYYAAAAAAGGQPQGAPQPGGGQSGGPPGNYPGNYPGAGYGGY 779
Query: 433 P--PQQMAPRSN 442
P P Q +S+
Sbjct: 780 PGAPGQQQQKSH 791
Score = 42 (19.8 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 377 SG-GFNQQAYRPRVPTGPPQWGPRGSHPSQPMA 408
SG G+ QQ + P G W P G MA
Sbjct: 547 SGAGYQQQPWGG--PYGQQGWDPSGQQQQMAMA 577
>WB|WBGene00022738 [details] [associations]
symbol:ZK418.9 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 eggNOG:NOG300923 InterPro:IPR015096 Pfam:PF09005
GeneTree:ENSGT00650000093048 HSSP:Q96AE4 EMBL:FO080150
HOGENOM:HOG000018892 PIR:T27855 RefSeq:NP_001023000.1
ProteinModelPortal:Q23487 SMR:Q23487 STRING:Q23487 PaxDb:Q23487
PRIDE:Q23487 EnsemblMetazoa:ZK418.9a GeneID:175989
KEGG:cel:CELE_ZK418.9 UCSC:ZK418.9b.2 CTD:175989 WormBase:ZK418.9a
InParanoid:Q23487 OMA:NCTIEGP NextBio:890626 ArrayExpress:Q23487
Uniprot:Q23487
Length = 557
Score = 207 (77.9 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 58/184 (31%), Positives = 100/184 (54%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK----IQITRDADADPHAATRPVEIIGT 255
++ ++ +P +K+G++IGK G+TIR +Q SG + +Q T A P +P+ +IG+
Sbjct: 138 VTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQP----KPLRMIGS 193
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLV-ARGLATAQASGA--AEQVEIK----VPNEKVG 308
+ I+ A+ L++ ++ G +P L A + Q G A++ + K VP G
Sbjct: 194 PAAIETAKALVHNIMNNTQ-GNAPLLQRAPHQPSGQFGGGYGAQEAQAKGEVIVPRLSAG 252
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+IIG+GGE IK L +G +IQ P P S++RI + G QI A E I E+++
Sbjct: 253 MIIGKGGEMIKRLAAETGTKIQFKPDTNPN---SEDRIAVIMGTRDQIYRATERITEIVN 309
Query: 369 QTVR 372
+ ++
Sbjct: 310 RAIK 313
Score = 192 (72.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 58/188 (30%), Positives = 89/188 (47%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP G++IGK G+ I+ L +G KIQ D +P++ R I+GT I +A
Sbjct: 243 EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFK--PDTNPNSEDRIAVIMGTRDQIYRA 300
Query: 263 EKLINAVIAEA-DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
+ I ++ A G+P RG A G + + VP K GL+IG+GGE IK +
Sbjct: 301 TERITEIVNRAIKNNGAPQ--DRGSAGTVLPGQSI-FYMHVPAGKCGLVIGKGGENIKQI 357
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK----EVLSQTVRPST-- 375
+ +GA L P E E++ + G QI A +++ E+ T P
Sbjct: 358 ERETGATCGLAPA--AEQKNEDEKVFEIKGSQLQIHHASHLVRIKVGEISPNTPVPPLQG 415
Query: 376 LSGGFNQQ 383
GG+ QQ
Sbjct: 416 AGGGYQQQ 423
Score = 186 (70.5 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 52/165 (31%), Positives = 80/165 (48%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP VG++IGK G IR +Q SG ++Q+ D D R I G + A ++
Sbjct: 60 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQM--DPDHQSVNGFRNCTIEGPPDQVAVARQM 117
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I VI G P A G T E+ +P +K+GL+IG+GGETI+ +Q +S
Sbjct: 118 ITQVINRNQTGAQPG-AAPGEVTE---------EMLIPADKIGLVIGKGGETIRIVQEQS 167
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G R + Q G + + R+ G IE A+ ++ +++ T
Sbjct: 168 GLRNCNVVQETTTATGQPKPL-RMIGSPAAIETAKALVHNIMNNT 211
Score = 124 (48.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 37/142 (26%), Positives = 71/142 (50%)
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEI-KVPNEKVG 308
++IIG I ++ +++ I + D P+ + + + + +I VP + VG
Sbjct: 9 IQIIGADGGIGTLKRPLDSEILDGDL--IPTKKSSEVGDLNMGDSDKITDIYPVPEKVVG 66
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
L+IG+GG I+ +Q SG R+Q+ P H +G + + G Q+ +A++MI +V++
Sbjct: 67 LVIGKGGSEIRLIQQTSGCRVQMDPDH-QSVNGFRN--CTIEGPPDQVAVARQMITQVIN 123
Query: 369 --QT-VRPSTLSGGFNQQAYRP 387
QT +P G ++ P
Sbjct: 124 RNQTGAQPGAAPGEVTEEMLIP 145
Score = 74 (31.1 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 39/160 (24%), Positives = 53/160 (33%)
Query: 536 PVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXX 595
P+Q GG+ Q ++S G GY G G Q QPQ
Sbjct: 412 PLQGAGGGYQQQQAMFSAGTQNGGYQST--G----GFIQQQQQPQFQHQQQQWAPQNGGG 465
Query: 596 YQSQVPSAQSYGP-NVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA 654
Q ++P+ P P P A++ P P+ G APD Y+ A Y +
Sbjct: 466 VQQRLPTEMYQNPMQQPQASVIPQASADPAPAVNPATG---APD-YS---AQWAAYYRSI 518
Query: 655 GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQ 694
G V Q + AP +QQ Y Q
Sbjct: 519 G-LVEQAAMVESQMRRNQSNTAPLGDVSGVPQSQQPYYPQ 557
Score = 61 (26.5 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 22/74 (29%), Positives = 31/74 (41%)
Query: 377 SGGFNQQAYRPRVPTGPPQWGPR-GSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
+GGF QQ +P+ QW P+ G Q + + Q P Q P +P + P
Sbjct: 439 TGGFIQQQQQPQFQHQQQQWAPQNGGGVQQRLPTEMYQN---PMQQPQASVIPQASADP- 494
Query: 436 QMAPRSNYG-GPPN 448
AP N G P+
Sbjct: 495 --APAVNPATGAPD 506
Score = 49 (22.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 19/62 (30%), Positives = 23/62 (37%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDY-PQRGPYPSQNP--HYPHLPYGNYPPQQMAPRSNY 443
P P PP G G + Q + Q G Y S P + QQ AP+ N
Sbjct: 406 PNTPV-PPLQGAGGGYQQQQAMFSAGTQNGGYQSTGGFIQQQQQPQFQHQQQQWAPQ-NG 463
Query: 444 GG 445
GG
Sbjct: 464 GG 465
>UNIPROTKB|F1LMZ7 [details] [associations]
symbol:Nova1 "RNA-binding protein Nova-1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0003723 IPI:IPI00331877
Ensembl:ENSRNOT00000044527 ArrayExpress:F1LMZ7 Uniprot:F1LMZ7
Length = 474
Score = 217 (81.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 68/203 (33%), Positives = 99/203 (48%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 52 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 111
Query: 263 EKLINAVIAEAD---AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I I E A P + + T +QV+I VPN GLIIG+GG T+K
Sbjct: 112 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD-RIKQVKIIVPNSTAGLIIGKGGATVK 170
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + P+G +ER+V V+G+ Q A E+I Q ++ SG
Sbjct: 171 AIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVELI----IQKIQEDPQSGS 224
Query: 380 FNQQAYRPRVPTGP-PQWGPRGS 401
+Y V TGP P GS
Sbjct: 225 CLNISYA-NV-TGPVANSNPTGS 245
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 378 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 437
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 438 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 474
Score = 52 (23.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 229 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 285
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 286 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 345
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 346 ASGSTAGGTA-GTFALG 361
>WB|WBGene00013347 [details] [associations]
symbol:Y59A8B.10 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 eggNOG:NOG258094
KO:K14944 EMBL:AL132898 GeneID:180183 KEGG:cel:CELE_Y59A8B.10
CTD:180183 HSSP:P51513 RefSeq:NP_001256769.1
ProteinModelPortal:Q9GRY9 SMR:Q9GRY9 DIP:DIP-24651N IntAct:Q9GRY9
MINT:MINT-1109012 STRING:Q9GRY9 PaxDb:Q9GRY9 PRIDE:Q9GRY9
EnsemblMetazoa:Y59A8B.10a UCSC:Y59A8B.10 WormBase:Y59A8B.10a
HOGENOM:HOG000017831 InParanoid:Q9GRY9 OMA:LAKYNIM NextBio:908344
ArrayExpress:Q9GRY9 Uniprot:Q9GRY9
Length = 413
Score = 211 (79.3 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 61/207 (29%), Positives = 112/207 (54%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+S KI +P+N VG +IGK G+ +R L+ ++ ++Q++++++ P + R + G L+NI
Sbjct: 42 LSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNI 101
Query: 260 DKAEKLINAVIAE--ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ I I E AD GGS + + T++ GA +++I +PN G++IG+ G
Sbjct: 102 MAVIESIQDKIREKCADQGGSDAFDHKN--TSR--GA--EIKIVMPNTSAGMVIGKSGAN 155
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQ--IEIAQEMIKEVLSQTVRPS 374
IK ++ + G +IQ+ P+ E S ER+V V D ++ A ++++V S S
Sbjct: 156 IKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDEASALLQAASRVLEKVASDPHHAS 215
Query: 375 TLSGGFNQQAY-RPRVPTGPPQWGPRG 400
+ N++ + + P+G GP G
Sbjct: 216 EI----NKEDFGKGSGPSGSANSGPSG 238
Score = 53 (23.7 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 33/134 (24%), Positives = 44/134 (32%)
Query: 647 APGYPQQAGQAVPNYPQPGGQQAPSYGQ---VAPTAGYGQYTNTQQAYPE--QPATSNAG 701
A G+ GQ PQ GGQ P +G P +G G N ++ + Q +G
Sbjct: 275 AAGFGGGGGQGYGG-PQFGGQGGPQFGNGNNKYPMSGLGN--NELLSFLDNLQSTLRTSG 331
Query: 702 YGYQGTQDXXXXXXXXXXXXXXXTGQ----PGYAQPAATQPSYDQSASQSTAYGVAQGTA 757
+ Q + G AQ Q S SA+ +A G G
Sbjct: 332 FNEQSVSEVMQAMQVLAKYNIMGLGLGLGVAAMAQMRTGQESQGMSANHGSA-GFGDGYG 390
Query: 758 AAGY-GKTVSPQPG 770
G G PQ G
Sbjct: 391 QGGVQGGPQGPQGG 404
Score = 39 (18.8 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 649 GYPQQAGQAVPNYPQPGG 666
GY Q Q P PQ GG
Sbjct: 388 GYGQGGVQGGPQGPQGGG 405
Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 551 YSQGGLQSGYHQHQYG 566
Y QGG+Q G Q G
Sbjct: 389 YGQGGVQGGPQGPQGG 404
>UNIPROTKB|Q9GRY9 [details] [associations]
symbol:Y59A8B.10 "Protein Y59A8B.10, isoform a"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00650000093048 eggNOG:NOG258094 KO:K14944
EMBL:AL132898 GeneID:180183 KEGG:cel:CELE_Y59A8B.10 CTD:180183
HSSP:P51513 RefSeq:NP_001256769.1 ProteinModelPortal:Q9GRY9
SMR:Q9GRY9 DIP:DIP-24651N IntAct:Q9GRY9 MINT:MINT-1109012
STRING:Q9GRY9 PaxDb:Q9GRY9 PRIDE:Q9GRY9 EnsemblMetazoa:Y59A8B.10a
UCSC:Y59A8B.10 WormBase:Y59A8B.10a HOGENOM:HOG000017831
InParanoid:Q9GRY9 OMA:LAKYNIM NextBio:908344 ArrayExpress:Q9GRY9
Uniprot:Q9GRY9
Length = 413
Score = 211 (79.3 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 61/207 (29%), Positives = 112/207 (54%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+S KI +P+N VG +IGK G+ +R L+ ++ ++Q++++++ P + R + G L+NI
Sbjct: 42 LSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNI 101
Query: 260 DKAEKLINAVIAE--ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ I I E AD GGS + + T++ GA +++I +PN G++IG+ G
Sbjct: 102 MAVIESIQDKIREKCADQGGSDAFDHKN--TSR--GA--EIKIVMPNTSAGMVIGKSGAN 155
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQ--IEIAQEMIKEVLSQTVRPS 374
IK ++ + G +IQ+ P+ E S ER+V V D ++ A ++++V S S
Sbjct: 156 IKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDEASALLQAASRVLEKVASDPHHAS 215
Query: 375 TLSGGFNQQAY-RPRVPTGPPQWGPRG 400
+ N++ + + P+G GP G
Sbjct: 216 EI----NKEDFGKGSGPSGSANSGPSG 238
Score = 53 (23.7 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 33/134 (24%), Positives = 44/134 (32%)
Query: 647 APGYPQQAGQAVPNYPQPGGQQAPSYGQ---VAPTAGYGQYTNTQQAYPE--QPATSNAG 701
A G+ GQ PQ GGQ P +G P +G G N ++ + Q +G
Sbjct: 275 AAGFGGGGGQGYGG-PQFGGQGGPQFGNGNNKYPMSGLGN--NELLSFLDNLQSTLRTSG 331
Query: 702 YGYQGTQDXXXXXXXXXXXXXXXTGQ----PGYAQPAATQPSYDQSASQSTAYGVAQGTA 757
+ Q + G AQ Q S SA+ +A G G
Sbjct: 332 FNEQSVSEVMQAMQVLAKYNIMGLGLGLGVAAMAQMRTGQESQGMSANHGSA-GFGDGYG 390
Query: 758 AAGY-GKTVSPQPG 770
G G PQ G
Sbjct: 391 QGGVQGGPQGPQGG 404
Score = 39 (18.8 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 649 GYPQQAGQAVPNYPQPGG 666
GY Q Q P PQ GG
Sbjct: 388 GYGQGGVQGGPQGPQGGG 405
Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 551 YSQGGLQSGYHQHQYG 566
Y QGG+Q G Q G
Sbjct: 389 YGQGGVQGGPQGPQGG 404
>UNIPROTKB|D3DS81 [details] [associations]
symbol:NOVA1 "Neuro-oncological ventral antigen 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:CH471078
RefSeq:NP_006480.2 UniGene:Hs.31588 GeneID:4857 KEGG:hsa:4857
CTD:4857 HGNC:HGNC:7886 HOGENOM:HOG000007833 KO:K14944
ChiTaRS:NOVA1 GenomeRNAi:4857 NextBio:18710 EMBL:AL079343
EMBL:AL132716 IPI:IPI00956017 SMR:D3DS81 Ensembl:ENST00000465357
UCSC:uc001wpz.3 Uniprot:D3DS81
Length = 483
Score = 215 (80.7 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 68/203 (33%), Positives = 99/203 (48%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 263 EKLINAVIAEAD---AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I I E A P + + T +QV+I VPN GLIIG+GG T+K
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD-RIKQVKIIVPNSTAGLIIGKGGATVK 171
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + P+G +ER+V V+G+ Q A E+I Q ++ SG
Sbjct: 172 AVMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVELI----IQKIQEDPQSGS 225
Query: 380 FNQQAYRPRVPTGP-PQWGPRGS 401
+Y V TGP P GS
Sbjct: 226 CLNISYA-NV-TGPVANSNPTGS 246
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 379 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 438
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 439 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 475
Score = 52 (23.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 230 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 286
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 287 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 346
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 347 ASGSTAGGTA-GTFALG 362
>RGD|1308032 [details] [associations]
symbol:Nova2 "neuro-oncological ventral antigen 2" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1308032 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00650000093048 IPI:IPI00958388
Ensembl:ENSRNOT00000057965 Uniprot:F1M4H5
Length = 516
Score = 225 (84.3 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 66/211 (31%), Positives = 101/211 (47%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++ A
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAA 119
Query: 263 EKLINAVIAEA-DAGGSPSLV-ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E A P +V T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 120 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 179
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA-QEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + PEG +ER+V V+G+ Q+ A ++++V S L+
Sbjct: 180 VMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 237
Query: 380 FNQQA--YRPRVPTGPPQWGPRGSHPSQPMA 408
+ A PTG P P P+ A
Sbjct: 238 YANVAGPVANSNPTGSPYASPADVLPAAAAA 268
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 54/159 (33%), Positives = 76/159 (47%)
Query: 236 TRDADADPHAATRPVE-----IIGTLSNIDKAEKLINAVIA-EADAGGSPSLVAR----- 284
T DA A P A P +G+ + A + A A AGG+P + A
Sbjct: 355 TGDAGAGPGAGAAPPPPPPPGALGSFALAAAANGYLGAGAGGAAGAGGAPLVAAAAAAGA 414
Query: 285 --GLATAQ---ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLP 337
G TA+ A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 415 AGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 474
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 475 ---GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 510
Score = 42 (19.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 38/152 (25%), Positives = 51/152 (33%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPT--AGYGQYTNT 687
SY + P + N P +P Y A +P A + G + P AG G +
Sbjct: 237 SYANVAGPVA-NSNPTGSP-YASPA-DVLP--AAAAASAAAASGLLGPAGLAGVGAFPAA 291
Query: 688 QQAYP--EQPATSNA-----GYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSY 740
A+ + A S A YGY T G A PAA
Sbjct: 292 LPAFSGTDLLAISTALNTLASYGYN-TNSLSLGLNSAAASGVLAAVAAG-ANPAAAA--- 346
Query: 741 DQSASQSTAYGVAQGTAAAGYGKTVSPQPGYP 772
+A+ +Y G A AG G +P P P
Sbjct: 347 --AANLLASY---TGDAGAGPGAGAAPPPPPP 373
>UNIPROTKB|F1MS84 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:DAAA02047389 IPI:IPI00703570 Ensembl:ENSBTAT00000017485
Uniprot:F1MS84
Length = 464
Score = 221 (82.9 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 65/211 (30%), Positives = 100/211 (47%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 263 EKLINAVIAEA-DAGGSPSLV-ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E A P +V T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 68 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 127
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA-QEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + PEG +ER+V V+G+ Q+ A ++++V S L+
Sbjct: 128 VMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 185
Query: 380 FNQQA--YRPRVPTGPPQWGPRGSHPSQPMA 408
+ A PTG P P P+ A
Sbjct: 186 YANVAGPVANSNPTGSPYASPADVLPAAAAA 216
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 45/114 (39%), Positives = 61/114 (53%)
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+ A A AGG L A LA A A E VEI VP VG I+G+GG+T+ Q
Sbjct: 353 LVAAAAAAGAAGGF--LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQEL 407
Query: 325 SGARIQLIP--QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+GARIQ+ + LP G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 408 TGARIQISKKGEFLP---GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 458
>UNIPROTKB|F1NP95 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:AADN02003296
EMBL:AADN02003297 EMBL:AADN02003298 EMBL:AADN02003299
EMBL:AADN02003300 EMBL:AADN02003301 EMBL:AADN02003302
EMBL:AADN02003303 EMBL:AADN02003304 EMBL:AADN02003305
EMBL:AADN02003306 EMBL:AADN02003307 EMBL:AADN02003308
EMBL:AADN02003309 EMBL:AADN02003310 EMBL:AADN02003311
EMBL:AADN02003312 EMBL:AADN02003313 EMBL:AADN02003314
EMBL:AADN02003315 IPI:IPI00814536 Ensembl:ENSGALT00000016012
ArrayExpress:F1NP95 Uniprot:F1NP95
Length = 345
Score = 216 (81.1 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 68/203 (33%), Positives = 99/203 (48%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 95
Query: 263 EKLINAVIAEAD---AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I I E A P + + T +QV+I VPN GLIIG+GG T+K
Sbjct: 96 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD-RIKQVKIIVPNSTAGLIIGKGGATVK 154
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + P+G +ER+V V+G+ Q A E+I Q ++ SG
Sbjct: 155 AIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVELI----IQKIQEDPQSGS 208
Query: 380 FNQQAYRPRVPTGP-PQWGPRGS 401
+Y V TGP P GS
Sbjct: 209 CLNISYA-NV-TGPVANSNPTGS 229
>UNIPROTKB|Q9UNW9 [details] [associations]
symbol:NOVA2 "RNA-binding protein Nova-2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 EMBL:AF083898
GO:GO:0005634 GO:GO:0003723 eggNOG:NOG258094 HOGENOM:HOG000007833
HOVERGEN:HBG082048 KO:K14944 EMBL:U70477 EMBL:AC006540
IPI:IPI00156005 RefSeq:NP_002507.1 UniGene:Hs.375439 PDB:1DTJ
PDB:1EC6 PDBsum:1DTJ PDBsum:1EC6 ProteinModelPortal:Q9UNW9
SMR:Q9UNW9 STRING:Q9UNW9 PhosphoSite:Q9UNW9 DMDM:33516944
PRIDE:Q9UNW9 DNASU:4858 Ensembl:ENST00000263257 GeneID:4858
KEGG:hsa:4858 UCSC:uc002pdv.2 CTD:4858 GeneCards:GC19M046442
HGNC:HGNC:7887 HPA:HPA045607 MIM:601991 neXtProt:NX_Q9UNW9
PharmGKB:PA31689 InParanoid:Q9UNW9 OMA:TPPEVVC PhylomeDB:Q9UNW9
EvolutionaryTrace:Q9UNW9 GenomeRNAi:4858 NextBio:18718
ArrayExpress:Q9UNW9 Bgee:Q9UNW9 CleanEx:HS_NOVA2
Genevestigator:Q9UNW9 GermOnline:ENSG00000104967 Uniprot:Q9UNW9
Length = 492
Score = 221 (82.9 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 65/211 (30%), Positives = 100/211 (47%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 263 EKLINAVIAEA-DAGGSPSLV-ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E A P +V T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 96 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 155
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA-QEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + PEG +ER+V V+G+ Q+ A ++++V S L+
Sbjct: 156 VMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Query: 380 FNQQA--YRPRVPTGPPQWGPRGSHPSQPMA 408
+ A PTG P P P+ A
Sbjct: 214 YANVAGPVANSNPTGSPYASPADVLPAAAAA 244
Score = 138 (53.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 45/114 (39%), Positives = 61/114 (53%)
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+ A A AGG L A LA A A E VEI VP VG I+G+GG+T+ Q
Sbjct: 381 LVAAAAAAGAAGGF--LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQEL 435
Query: 325 SGARIQLIP--QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+GARIQ+ + LP G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 436 TGARIQISKKGEFLP---GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 486
>UNIPROTKB|F1PUD6 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:AAEX03000869 EMBL:AAEX03000868 Ensembl:ENSCAFT00000006989
Uniprot:F1PUD6
Length = 502
Score = 221 (82.9 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 65/211 (30%), Positives = 100/211 (47%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 46 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 105
Query: 263 EKLINAVIAEA-DAGGSPSLV-ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E A P +V T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 106 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 165
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA-QEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + PEG +ER+V V+G+ Q+ A ++++V S L+
Sbjct: 166 VMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 223
Query: 380 FNQQA--YRPRVPTGPPQWGPRGSHPSQPMA 408
+ A PTG P P P+ A
Sbjct: 224 YANVAGPVANSNPTGSPYASPADVLPAAAAA 254
Score = 138 (53.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 45/114 (39%), Positives = 61/114 (53%)
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+ A A AGG L A LA A A E VEI VP VG I+G+GG+T+ Q
Sbjct: 391 LVAAAAAAGAAGGF--LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQEL 445
Query: 325 SGARIQLIP--QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+GARIQ+ + LP G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 446 TGARIQISKKGEFLP---GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 496
>RGD|621345 [details] [associations]
symbol:Nova1 "neuro-oncological ventral antigen 1" species:10116
"Rattus norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0005634 GO:GO:0007399 GO:GO:0003723
eggNOG:NOG258094 HOGENOM:HOG000007833 HOVERGEN:HBG082048
EMBL:AY262017 IPI:IPI00331877 UniGene:Rn.232418
ProteinModelPortal:Q80WA4 SMR:Q80WA4 PRIDE:Q80WA4 UCSC:RGD:621345
ArrayExpress:Q80WA4 Genevestigator:Q80WA4 Uniprot:Q80WA4
Length = 474
Score = 215 (80.7 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 57/170 (33%), Positives = 88/170 (51%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 52 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 111
Query: 263 EKLINAVIAEAD---AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I I E A P + + T +QV+I VPN GLIIG+GG T+K
Sbjct: 112 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD-RIKQVKIIVPNSTAGLIIGKGGATVK 170
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+ +SGA +QL + P+G +ER+V V+G+ Q A E+I + + +
Sbjct: 171 AIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVELIIQKIQE 218
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 378 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 437
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 438 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 474
Score = 49 (22.3 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 36/137 (26%), Positives = 44/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P P Y A + +P G A G A A +T
Sbjct: 229 SYANVTGPVA-NSNPTGFP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 285
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 286 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 345
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 346 ASGSTAGGTA-GTFALG 361
>UNIPROTKB|F1RM28 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:FP102597 Ensembl:ENSSSCT00000003434 Uniprot:F1RM28
Length = 554
Score = 221 (82.9 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 65/211 (30%), Positives = 100/211 (47%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 98 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 157
Query: 263 EKLINAVIAEA-DAGGSPSLV-ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E A P +V T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 158 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 217
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA-QEMIKEVLSQTVRPSTLSGG 379
+ +SGA +QL + PEG +ER+V V+G+ Q+ A ++++V S L+
Sbjct: 218 VMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 275
Query: 380 FNQQA--YRPRVPTGPPQWGPRGSHPSQPMA 408
+ A PTG P P P+ A
Sbjct: 276 YANVAGPVANSNPTGSPYASPADVLPAAAAA 306
Score = 138 (53.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 45/114 (39%), Positives = 61/114 (53%)
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+ A A AGG L A LA A A E VEI VP VG I+G+GG+T+ Q
Sbjct: 443 LVAAAAAAGAAGGF--LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQEL 497
Query: 325 SGARIQLIP--QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+GARIQ+ + LP G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 498 TGARIQISKKGEFLP---GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 548
>ZFIN|ZDB-GENE-060526-113 [details] [associations]
symbol:nova1 "neuro-oncological ventral antigen 1"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-060526-113 GO:GO:0003723 EMBL:BX005407
GeneTree:ENSGT00650000093048 CTD:4857 eggNOG:NOG258094
HOGENOM:HOG000007833 HOVERGEN:HBG082048 KO:K14944 OMA:FRQNNTA
EMBL:BC171495 EMBL:BC171499 IPI:IPI00487894 RefSeq:NP_001038254.1
UniGene:Dr.103261 SMR:Q1LYC7 Ensembl:ENSDART00000097684
GeneID:555590 KEGG:dre:555590 InParanoid:Q1LYC7 OrthoDB:EOG40ZQZR
NextBio:20881056 Uniprot:Q1LYC7
Length = 495
Score = 211 (79.3 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 55/176 (31%), Positives = 89/176 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 119
Query: 263 EKLINAVIAEADAGGS---PSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 120 HNFIAEKVREMPQSSQKTEPVSILQPQTTVNPD-RIKQAKLIVPNSTAGLIIGKGGATVK 178
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
+ +SGA +QL + PEG +ER+V V+G+ Q A E+I + + + + S+
Sbjct: 179 AVMEQSGAWVQLSQK--PEGINLQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSSS 232
Score = 129 (50.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + L T + A G E VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 391 SPLVASSLLGTEKLAEGGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 450
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 451 FIP---GTRNRKVTITGSPAATQAAQYLISQRITYEQGVR 487
>ZFIN|ZDB-GENE-080211-1 [details] [associations]
symbol:nova2 "neuro-oncological ventral antigen 2"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-080211-1 GO:GO:0003723 eggNOG:NOG258094
HOGENOM:HOG000007833 HOVERGEN:HBG082048 EMBL:AY597523
IPI:IPI01006797 UniGene:Dr.77006 OrthoDB:EOG4D26RK
ArrayExpress:Q53B45 Uniprot:Q53B45
Length = 473
Score = 210 (79.0 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 53/176 (30%), Positives = 89/176 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 125
Query: 263 EKLINAVIAEADAGGS---PSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 126 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPD-RVKQAKLVVPNSTAGLIIGKGGATVK 184
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
+ +SGA +QL + P+G +ER+V ++G+ Q A E+I + + + + S+
Sbjct: 185 AVMEQSGAWVQLSQK--PDGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 238
Score = 129 (50.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 40/112 (35%), Positives = 61/112 (54%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ-ASGAAEQVEIK 301
+A P +G TL ++ A N ++ A SP + + LAT + A GA + VEI
Sbjct: 367 SAGHPATSLGGFTLGSLAAATGATNGYLSAA----SPLVASSLLATEKLAEGAKDVVEIA 422
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTG 351
VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +TG
Sbjct: 423 VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTITG 471
>WB|WBGene00016489 [details] [associations]
symbol:C36E6.1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 eggNOG:NOG300923 InterPro:IPR015096
Pfam:PF09005 GeneTree:ENSGT00650000093048 HSSP:Q96AE4 EMBL:FO080802
GeneID:181773 KEGG:cel:CELE_C36E6.1 CTD:181773 HOGENOM:HOG000018892
RefSeq:NP_510825.1 ProteinModelPortal:Q9BLA0 SMR:Q9BLA0
STRING:Q9BLA0 PaxDb:Q9BLA0 PRIDE:Q9BLA0 EnsemblMetazoa:C36E6.1b
UCSC:C36E6.1a WormBase:C36E6.1b InParanoid:Q9BLA0 OMA:IQLIQEN
NextBio:915282 ArrayExpress:Q9BLA0 Uniprot:Q9BLA0
Length = 641
Score = 196 (74.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 78/253 (30%), Positives = 117/253 (46%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
TMS +++VP VG ++G G I+ L +G KIQ D D DP R + IIG +
Sbjct: 245 TMSLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFLPD-D-DPKLMERSLAIIGNKNK 302
Query: 259 IDKAEKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ +LI A++ A ++A +P ++ + +P K GL+IGRGGET
Sbjct: 303 VYVCAQLIKAIVEANSEAANAPVVL---------------FYMVIPASKCGLVIGRGGET 347
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST-- 375
IK + SGA +L P + ++ V + G Q+E A+ +I+ + + P+T
Sbjct: 348 IKQINQESGAHCELSRD--PNTNPIEKTFV-IRGSEAQVEHAKHLIRVKVGD-IPPNTPY 403
Query: 376 LSGGFNQQAYRPRVPTGPPQW---GP--RGSHPSQPMAYDYPQRGPYPSQNPHYPHL-PY 429
G Q P+ PPQ P +G P+ M P P Q PH+ H P
Sbjct: 404 TPAGMPQ----PQPQQQPPQMVQVQPNLQGQQPNMQMWAGQPLV-QQPQQ-PHHIHQQPA 457
Query: 430 GNYP---PQQMAP 439
+P PQ MAP
Sbjct: 458 QLHPVQLPQVMAP 470
Score = 176 (67.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 45/166 (27%), Positives = 86/166 (51%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD-ADPHAATRPVEIIGTLSNIDK 261
+I +P NK G +IGK G+ +R L+ + +Q+ +D + AD +P++I G +++
Sbjct: 160 EIPIPANKCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIAD---TVKPLKITGDPKQVEQ 216
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
L+ ++A D +P A + A +++KVP VG I+G G+ IK L
Sbjct: 217 CRLLVADILACND--DTP---ASAMMAGNGPVATMSLQVKVPRCTVGAIMGLQGKNIKKL 271
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+G +IQ +P P+ ER + + G+ ++ + ++IK ++
Sbjct: 272 SDETGTKIQFLPDDDPK---LMERSLAIIGNKNKVYVCAQLIKAIV 314
Score = 171 (65.3 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 47/174 (27%), Positives = 88/174 (50%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP VG++IG+ G ++ + SG ++Q+T + R VEI G NI++A+
Sbjct: 59 VPVPEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQPSS---TGFRLVEIYGIPENIERAK 115
Query: 264 KLINAVIAEADAGGSP------SLVARGLATA---QASGAAEQVEIKVPNEKVGLIIGRG 314
I+ V+ P + G+ + Q + +EI +P K G IIG+G
Sbjct: 116 AYISEVVTRGTRQPGPLCQPVVHVQTHGIKSPVVDQGDPSKITIEIPIPANKCGAIIGKG 175
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
GE ++ L++ + +QL+ Q D K +++TGD +Q+E + ++ ++L+
Sbjct: 176 GEQMRKLRSWTNCNVQLL-QDNNIADTVKP--LKITGDPKQVEQCRLLVADILA 226
Score = 118 (46.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 292 SGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+G +V + VP + VGL+IGR G ++ + +SG R+Q+ Q P G R+V + G
Sbjct: 51 NGLIVKVAVPVPEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQ--PSSTGF--RLVEIYG 106
Query: 352 DMRQIEIAQEMIKEVLSQTVR-PSTL 376
IE A+ I EV+++ R P L
Sbjct: 107 IPENIERAKAYISEVVTRGTRQPGPL 132
Score = 64 (27.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 29/115 (25%), Positives = 36/115 (31%)
Query: 597 QSQVPSAQSY-GPNVPHQQQYPYATSGPTQQTYP-SYGSAPAPDSYNQPPASAPGYPQQA 654
Q Q P+ Q + G + Q Q P+ Q +P AP Y A P Q
Sbjct: 428 QGQQPNMQMWAGQPLVQQPQQPHHIHQQPAQLHPVQLPQVMAPPGYPTQAAYPPQAVYQQ 487
Query: 655 GQAVPNYPQPGGQ-QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQ 708
+P Q Q Y Q A Y QQ P T + Y Q
Sbjct: 488 TSVAAWHPMQQAQPQQQQYVQAAIPVSQAMYQPPQQPAPAPVETGLSLYAQYAMQ 542
Score = 63 (27.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 27/113 (23%), Positives = 42/113 (37%)
Query: 601 PSAQSYGPNVPHQQQ-----YPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAG 655
P+ +Y P +QQ +P + P QQ Y + P + QPP P + G
Sbjct: 474 PTQAAYPPQAVYQQTSVAAWHPMQQAQPQQQQYVQ-AAIPVSQAMYQPPQQPAPAPVETG 532
Query: 656 QAV-PNYPQPGG--QQAPSYGQVAPT--AGYGQYTNTQQAYPEQPATSNAGYG 703
++ Y QQ Q+A A + TQQ + A++ G
Sbjct: 533 LSLYAQYAMQAAAQQQEQQRAQMAAQQEAKLAKQQTTQQVAQKDTASAQNSTG 585
Score = 52 (23.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 24/82 (29%), Positives = 27/82 (32%)
Query: 623 PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYG 682
P Y G P P QPP P GQ PN GQ P Q P +
Sbjct: 398 PPNTPYTPAGM-PQPQPQQQPPQMVQVQPNLQGQQ-PNMQMWAGQ--PLVQQ--PQQPHH 451
Query: 683 QYTNTQQAYPEQPATSNAGYGY 704
+ Q +P Q A GY
Sbjct: 452 IHQQPAQLHPVQLPQVMAPPGY 473
>DICTYBASE|DDB_G0277909 [details] [associations]
symbol:cbpP "calcium-binding protein" species:44689
"Dictyostelium discoideum" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002048
InterPro:IPR011992 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054
dictyBase:DDB_G0277909 Prosite:PS00018 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 EMBL:U03413 RefSeq:XP_642080.1
ProteinModelPortal:P35085 PRIDE:P35085 EnsemblProtists:DDB0214957
GeneID:8621293 KEGG:ddi:DDB_G0277909 eggNOG:NOG135385 OMA:MGAYPPQ
ProtClustDB:CLSZ2846833 Uniprot:P35085
Length = 467
Score = 164 (62.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 79/259 (30%), Positives = 86/259 (33%)
Query: 536 PVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSY---XXXXXXXXXX 592
P Q P G P QG Y Q G+P P Q QP +Y
Sbjct: 148 PPQQP--GQPGQYPPQQQGQ----YPPQQPGQPGAYPPQQSGQPGAYPPQQGVQNTLAKT 201
Query: 593 XXXYQSQVPSAQ-SY-G-PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPG 649
Q VP Q +Y G P VP QQ Y P YP G P +Y PP PG
Sbjct: 202 GAPGQPGVPPPQGAYPGQPGVPPQQG-AYPGQQPPMGAYPPQGQ---PGAY--PPQGQPG 255
Query: 650 -YPQQAGQ-AVPNYPQPGGQQAPSYGQVAPTAG-Y----GQYTNTQQAYPEQPATSNAGY 702
YP Q Q A P P G P G G Y G Y Q AYP QP
Sbjct: 256 AYPPQQQQVAYPGQQPPMGAYPPQQGAYPGQQGAYPGQQGAYPGQQGAYPGQPPMG---- 311
Query: 703 GYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYG 762
Y G Q PG P P Q+TAY Q T A GYG
Sbjct: 312 AYPGQQQYGVSAYSQTTAAYQTGAYPGQT-PMGVYPG------QTTAYAAYQ-TTAIGYG 363
Query: 763 KTVSPQPGYPQYDSTQMYA 781
T + P Y Y+
Sbjct: 364 ATSTYSYTRPTYSYATPYS 382
Score = 138 (53.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 74/240 (30%), Positives = 79/240 (32%)
Query: 543 GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ-GTQ-PQSYXXXXXXXXXXXXXYQSQV 600
G SQ G Y Q G P +P GTQ P + Y Q
Sbjct: 29 GAPGSQSTPGAPGAPGQYPPQQPGAPGSNLPPYPGTQQPGAPGAPGQYPPQQPGQYPPQQ 88
Query: 601 PSAQS-YGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPG-YPQQAGQAV 658
P A Y P P Q YP G + Q YP P Y APG YP Q GQ
Sbjct: 89 PGAPGQYPPQQPGQPGYPPQQPGQSGQ-YPP--QQPGQPGYPPQQPGAPGQYPPQQGQPG 145
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQ----AYPEQPATSNAGYG-YQGTQDXXXX 713
PQ GQ P GQ P GQY Q AYP Q + Y QG Q+
Sbjct: 146 QYPPQQPGQ--P--GQYPPQQ-QGQYPPQQPGQPGAYPPQQSGQPGAYPPQQGVQNTLAK 200
Query: 714 XXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPG-YP 772
GQPG P P Q AY Q A Y QPG YP
Sbjct: 201 TGA--------PGQPGVPPPQGAYPGQPGVPPQQGAYPGQQPPMGA-YPP--QGQPGAYP 249
Score = 131 (51.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 69/242 (28%), Positives = 75/242 (30%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXX 594
AP Q+P P Q G Y Q G+P Y P Q Q Y
Sbjct: 72 APGQYPPQQPGQYPP--QQPGAPGQYPPQQPGQPGYP-PQQPGQSGQYPPQQPGQPG--- 125
Query: 595 XYQSQVPSAQS-YGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQ 653
Y Q P A Y P QYP G Q YP P P + P PQQ
Sbjct: 126 -YPPQQPGAPGQYPPQQGQPGQYPPQQPGQPGQ-YPPQQQGQYPPQQPGQPGAYP--PQQ 181
Query: 654 AGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ--YTNTQQAYPEQPATSNAGYGYQGTQDXX 711
+GQ PQ G Q +A T GQ Q AYP QP Y G Q
Sbjct: 182 SGQPGAYPPQQGVQNT-----LAKTGAPGQPGVPPPQGAYPGQPGVPPQQGAYPGQQPPM 236
Query: 712 XXXXXXXXXXXXXT-GQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPG 770
GQPG P Q +Y AY QG G Q
Sbjct: 237 GAYPPQGQPGAYPPQGQPGAYPPQQQQVAYPGQQPPMGAYPPQQGAYPGQQGAYPGQQGA 296
Query: 771 YP 772
YP
Sbjct: 297 YP 298
Score = 89 (36.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 27/70 (38%), Positives = 32/70 (45%)
Query: 385 YRPRVPTGPPQWGPR-----GSHPSQP-MAYDYPQRGP-YPSQNPHYPHLPYGNYPPQQM 437
Y P+ P P Q+ P+ G P QP + YP + P P P P P G YPPQQ
Sbjct: 84 YPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQPGQPGYPPQQPGAP-GQYPPQQG 142
Query: 438 APRSNYGGPP 447
P Y PP
Sbjct: 143 QP-GQY--PP 149
Score = 75 (31.5 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 24/63 (38%), Positives = 29/63 (46%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYP-SQNPHYPHLPYGNYPPQQMA--PRSNY 443
P P P Q+ P+ P P + + P PYP +Q P P P G YPPQQ P
Sbjct: 37 PGAPGAPGQYPPQ--QPGAPGS-NLP---PYPGTQQPGAPGAP-GQYPPQQPGQYPPQQP 89
Query: 444 GGP 446
G P
Sbjct: 90 GAP 92
Score = 74 (31.1 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 28/70 (40%), Positives = 30/70 (42%)
Query: 385 YRPRVPTGP----PQWGPRGSHPSQPMAY-DYP--QRGPYPSQNPHYPHLPYGNYPPQQM 437
Y P+ P P P + P P P A YP Q G YP Q P P G YPPQQ
Sbjct: 46 YPPQQPGAPGSNLPPY-PGTQQPGAPGAPGQYPPQQPGQYPPQQPGAP----GQYPPQQ- 99
Query: 438 APRSNYGGPP 447
P G PP
Sbjct: 100 -P-GQPGYPP 107
Score = 67 (28.6 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 23/60 (38%), Positives = 24/60 (40%)
Query: 390 PTGPPQWGPRGSHPSQ-PMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQM-APRSNYGGPP 447
P PP G SQ P+ P P P P G YPPQQ AP SN PP
Sbjct: 4 PQNPPPAGSAADFYSQMPVKVMGTPGAPGSQSTPGAPGAP-GQYPPQQPGAPGSNL--PP 60
>UNIPROTKB|C9JSZ1 [details] [associations]
symbol:FUBP1 "Far upstream element-binding protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
EMBL:AC096948 HGNC:HGNC:4004 ChiTaRS:FUBP1 IPI:IPI00641948
ProteinModelPortal:C9JSZ1 SMR:C9JSZ1 STRING:C9JSZ1 PRIDE:C9JSZ1
Ensembl:ENST00000421641 HOGENOM:HOG000110867 ArrayExpress:C9JSZ1
Bgee:C9JSZ1 Uniprot:C9JSZ1
Length = 232
Score = 183 (69.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 46/123 (37%), Positives = 68/123 (55%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT ++
Sbjct: 121 MTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESV 177
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGETIK
Sbjct: 178 QSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIK 229
Query: 320 GLQ 322
LQ
Sbjct: 230 QLQ 232
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 210 KVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAV 269
K+G G AG ++ Y G + + D D + + G S K + V
Sbjct: 44 KIG---GDAGTSLNSNDYGYGGQKRPLEDGDGSWTSPSSTTHWEGMPSPF-KDQPDAKKV 99
Query: 270 IAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARI 329
+ D+ G+ + Q S E E KVP+ VG IIGRGGE I +Q SG +I
Sbjct: 100 APQNDSFGTQ---LPPMHQQQRSVMTE--EYKVPDGMVGFIIGRGGEQISRIQQESGCKI 154
Query: 330 QLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
Q+ P + G ER +TG ++ A+ ++ +++ + RP+
Sbjct: 155 QIAP----DSGGLPERSCMLTGTPESVQSAKRLLDQIVEKG-RPA 194
>UNIPROTKB|D4A6P8 [details] [associations]
symbol:Fubp3 "Protein Fubp3" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307004 GO:GO:0003723 EMBL:AC108321
IPI:IPI00951068 Ensembl:ENSRNOT00000063932 ArrayExpress:D4A6P8
Uniprot:D4A6P8
Length = 277
Score = 185 (70.2 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 60/206 (29%), Positives = 93/206 (45%)
Query: 222 IRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADA----GG 277
I+ +Q ++G +IQ D P R +++G A ++IN +I A GG
Sbjct: 2 IKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQHAARIINELILTAQEREILGG 58
Query: 278 SPSLVARGLATAQAS----GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
RG S G +++ VP +K GL+IG+GGE IK + +SGA ++L
Sbjct: 59 LTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQR 118
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE-VLSQTVRPSTLSGG--FNQQAYRPRVP 390
P D + RI + G +QIE+A+ +I E V ++ T G F+Q P
Sbjct: 119 NPPPNTDPNL-RIFTIRGAPQQIEVARHLIDEKVGGASLGAPTAFGQSPFSQPPAAPHQN 177
Query: 391 TGPPQWGPRGSHPSQPMAYDYPQRGP 416
T PP+ P + + P GP
Sbjct: 178 TFPPRAFPNIAAKVNGNPHSTPVSGP 203
Score = 94 (38.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP +K G++IGK G+ I+ + SGA +++ R+ + R I G I+ A L
Sbjct: 87 VPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARHL 146
Query: 266 INAVIAEADAG 276
I+ + A G
Sbjct: 147 IDEKVGGASLG 157
Score = 65 (27.9 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 31/108 (28%), Positives = 44/108 (40%)
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA-GQA 657
Q P +Q P PHQ +P P + +P+ + + ++ P + P + Q G
Sbjct: 164 QSPFSQP--PAAPHQNTFP-----P--RAFPNIAAKVNGNPHSTPVSGPPAFLTQGWGST 214
Query: 658 VPNYPQPGGQQAPSYG-QVAPTAGYG-QYTNTQQAYPEQPATSNAGYG 703
+ QP QQ PS+ AP A YT Y Q A A YG
Sbjct: 215 YQAWQQPT-QQVPSHTTSAAPQASSPPDYTMAWAEYYRQQA---AFYG 258
>TAIR|locus:2084908 [details] [associations]
symbol:FLK "AT3G04610" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 EMBL:CP002686 GO:GO:0003723
GO:GO:0009911 EMBL:AC011437 KO:K13162 HSSP:Q9UNW9 EMBL:AY070475
IPI:IPI00521688 RefSeq:NP_187112.1 UniGene:At.28392
ProteinModelPortal:Q9SR13 SMR:Q9SR13 STRING:Q9SR13 PRIDE:Q9SR13
ProMEX:Q9SR13 EnsemblPlants:AT3G04610.1 GeneID:819619
KEGG:ath:AT3G04610 TAIR:At3g04610 InParanoid:Q9SR13 OMA:LEPQQYE
PhylomeDB:Q9SR13 ProtClustDB:CLSN2914698 Genevestigator:Q9SR13
Uniprot:Q9SR13
Length = 577
Score = 168 (64.2 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 70/268 (26%), Positives = 115/268 (42%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T+ R + VP KVG +IG+ GD I+ + + A+I+I D P R V + G
Sbjct: 187 TVFRML-VPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEP 242
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAE-QVEIKVPNEKVGLIIGRGG 315
++ ++ + GL +QA ++ + VP + G +IG+ G
Sbjct: 243 ESSLPPSMDGLLRVH------MRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQG 296
Query: 316 ETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
T+K +Q S ++++ + LP +R+V V G+ + A E+I L + +
Sbjct: 297 GTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356
Query: 375 TLSGGFNQQAYRP--RVPTGPP---QWGPRGSH-PSQPMA-YDY---PQRGPYPSQNPHY 424
++ F Q +P ++ PP WGP H PS Y + P P P + +Y
Sbjct: 357 SIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYY 416
Query: 425 PHLPYGNYPPQQMAPR---SNYGGPPNM 449
P P PP + P S YG P M
Sbjct: 417 PP-PEMRQPPMEKQPHQGISAYGREPPM 443
Score = 66 (28.3 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 41/182 (22%), Positives = 56/182 (30%)
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY--NQPPASAPGYPQQ 653
Y P SY P P + + P P Q +YG P + + + PP A QQ
Sbjct: 405 YMQPPPRHDSYYP--PPEMRQPPMEKQP-HQGISAYGREPPMNVHVSSAPPMVAQQVTQQ 461
Query: 654 AGQAVPNYPQPG-GQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
Q +Y G + +G + P + +G G Q
Sbjct: 462 M-QIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQ-----VQ 515
Query: 713 XXXXXXXXXXXXTGQPGYAQP---AATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQP 769
G P AQP A Q Y+ A+ + Y A GY S
Sbjct: 516 TAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNPPGGYATDYSSGY 575
Query: 770 GY 771
GY
Sbjct: 576 GY 577
>TAIR|locus:2017612 [details] [associations]
symbol:AT1G51580 "AT1G51580" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC025294
EMBL:AC024261 GO:GO:0003723 UniGene:At.37784 eggNOG:NOG285495
UniGene:At.66909 KO:K13162 EMBL:BT008776 EMBL:AK227874
IPI:IPI00539866 PIR:D96554 RefSeq:NP_175569.1
ProteinModelPortal:Q9C553 SMR:Q9C553 IntAct:Q9C553 PaxDb:Q9C553
PRIDE:Q9C553 EnsemblPlants:AT1G51580.1 GeneID:841583
KEGG:ath:AT1G51580 TAIR:At1g51580 HOGENOM:HOG000077702
InParanoid:Q9C553 OMA:PGFDRPP PhylomeDB:Q9C553
ProtClustDB:CLSN2679414 Genevestigator:Q9C553 Uniprot:Q9C553
Length = 621
Score = 185 (70.2 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 68/253 (26%), Positives = 115/253 (45%)
Query: 207 PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP-HAATRPVEIIGTLSNIDKAEKL 265
P +KVG LIGK G +R LQ SGA I+++ DP H + + +I N+++ L
Sbjct: 283 PADKVGSLIGKGGAVVRALQNESGASIKVS-----DPTHDSEERIIVISARENLERRHSL 337
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+ +V G + AA + V + +G ++G+GG I ++ +
Sbjct: 338 AQDGVMRVHN----RIVEIGFEPS----AAVVARLLVHSPYIGRLLGKGGHLISEMRRAT 389
Query: 326 GARIQLIPQ-HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTL--SG-GFN 381
GA I++ + + + + IV+V G+++ ++ A I L + + P L G G
Sbjct: 390 GASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGP 449
Query: 382 QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL--PYG---NYPPQQ 436
+ P PP +GPR +P+ P Y P GP+ ++ H P P G + PP
Sbjct: 450 PPPFMGPYPEPPPPFGPR-QYPASPDRYHSPV-GPFHERHCHGPGFDRPPGPGFDRPPSP 507
Query: 437 MA--PRSNYGGPP 447
M+ P+ G P
Sbjct: 508 MSWTPQPGIDGHP 520
Score = 92 (37.4 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 296 EQVEIKV--PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDM 353
E+V ++ P +KVG +IG+GG ++ LQ SGA I++ P D S+ERI+ ++
Sbjct: 274 EEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSD---PTHD-SEERIIVISARE 329
Query: 354 ---RQIEIAQEMIKEVLSQTV 371
R+ +AQ+ + V ++ V
Sbjct: 330 NLERRHSLAQDGVMRVHNRIV 350
Score = 76 (31.8 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 207 PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI 266
P + G +IGK G IR+LQ +G+KI++ D P + R V II S K E
Sbjct: 26 PATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPV-P-SEERVVLIIAP-SGKKKDES-- 80
Query: 267 NAVIAEADAGGSPSLVARGLATAQASGAAEQ 297
N +E P +G A SG ++
Sbjct: 81 NVCDSENPGSEEPKQ-EKGSECAGTSGGDDE 110
Score = 41 (19.5 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 15/53 (28%), Positives = 17/53 (32%)
Query: 622 GPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQ-PGGQQAPSYG 673
GP Y P P Q PAS Y G + PG + P G
Sbjct: 448 GPPPPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPG 500
Score = 40 (19.1 bits), Expect = 0.0010, Sum P(3) = 0.0010
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 623 PTQQTYPSYGSAPAP--DSYNQPPASAPGYPQQAGQAVPNYPQPGG 666
P + + G P P Y +PP P P+Q + Y P G
Sbjct: 438 PGRLPFQGMGGPPPPFMGPYPEPPP--PFGPRQYPASPDRYHSPVG 481
>FB|FBgn0085362 [details] [associations]
symbol:Vml "Vitelline membrane-like" species:7227 "Drosophila
melanogaster" [GO:0009950 "dorsal/ventral axis specification"
evidence=IGI] [GO:0060388 "vitelline envelope" evidence=IDA]
[GO:0007305 "vitelline membrane formation involved in
chorion-containing eggshell formation" evidence=ISM] [GO:0008316
"structural constituent of vitelline membrane" evidence=ISM]
[GO:0035805 "egg coat" evidence=ISM] EMBL:AE014298 GO:GO:0009950
GeneTree:ENSGT00700000104744 PROSITE:PS51137 GO:GO:0060388
InterPro:IPR013135 RefSeq:NP_001096866.1 UniGene:Dm.32785
STRING:A8JUV4 EnsemblMetazoa:FBtr0112535 GeneID:5740271
KEGG:dme:Dmel_CG34333 UCSC:CG34333-RA CTD:5740271
FlyBase:FBgn0085362 eggNOG:NOG284187 InParanoid:A8JUV4 OMA:ISKYETI
OrthoDB:EOG4KPRTT GenomeRNAi:5740271 NextBio:20891311 Bgee:A8JUV4
Uniprot:A8JUV4
Length = 578
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 103/428 (24%), Positives = 137/428 (32%)
Query: 383 QAYR-PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQN-PHY--PHLPYGNYP--PQQ 436
Q Y P P P P S P+ P +Y P Y + P Y P P + P P
Sbjct: 72 QGYSAPAAPVYSPA-APSYSAPAAP-SYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSY 129
Query: 437 MAPRSN-YGGPPNMXXXXXXXXXXXXXXXHVSDRPVSVSHST-SIPGHXXXXXXXXXXXX 494
AP S+ Y P P S S+S + P +
Sbjct: 130 SAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPA 189
Query: 495 X---XXXXNYNYGQPHTSEYXXXXXXXXXXXXX--XXGHGYDDNHAPVQHPYGGHSNSQP 549
+Y P Y AP Y H+ + P
Sbjct: 190 APSYSAPAAPSYSAPAAPSYSAPAAPSYSAPSAPSYSAQKTSSYSAPAAPSY--HAPAAP 247
Query: 550 VYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPN 609
S +G P Y P+ SY P+A SY +
Sbjct: 248 ASSYSA-PAGPSYSAPAAPSYSAPSYSAPASSYSALKAPSYSAPAAPSYSAPAAPSYSSS 306
Query: 610 VPHQQQYPYATS--GPTQQTY--P---SYGSAPAPDSYNQPPA---SAPGYPQQAGQAVP 659
P ++S P TY P SY SAPA SY+ P A SAP + A P
Sbjct: 307 ASPSYSSPASSSYSAPAAPTYSAPKAQSY-SAPAAPSYSAPAAPSYSAPASSSYSAPAAP 365
Query: 660 NYPQPGGQQAPSYGQVAPTA-GYGQYTNTQQAYPEQPATSN-AGYGYQGTQDXXXXXXXX 717
+Y P APSY AP A Y ++ + P P+ S A Y
Sbjct: 366 SYSAPA---APSYS--APAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAP--ASSSYSAP 418
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQG-TAAAGYGK-TVSPQPGYPQYD 775
P Y+ PAA PSY A+ S + + G +AA Y + +P GY
Sbjct: 419 AAPSYSAPAAPSYSAPAA--PSYSAPAAPSYSAPASSGYSAARAYSAGSAAPASGYSAPK 476
Query: 776 STQMYAAP 783
++ Y+AP
Sbjct: 477 TSSGYSAP 484
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 101/413 (24%), Positives = 132/413 (31%)
Query: 390 PTGPPQWGPRGSHPSQPMA--YDYPQRGPYPSQN-PHY--PHLPYGNYP--PQQMAPRS- 441
P P P S S P A Y P Y + P Y P P + P P AP +
Sbjct: 156 PAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAP 215
Query: 442 NYGGP--PNMXXXXXXXXXXXXX-XXHVSDRPVSVSHSTSIPGHXXXXXXXXXXXXXXXX 498
+Y P P+ H P S + + P +
Sbjct: 216 SYSAPSAPSYSAQKTSSYSAPAAPSYHAPAAPASSYSAPAGPSYSAPAAPSYSAPSYSAP 275
Query: 499 XNYNYGQPHTSEYXXXXXXXXXXXXXXXGHGYDDNHAPVQHPYGGHSNSQPV---YSQGG 555
+ +Y Y Y + +P S S P YS
Sbjct: 276 AS-SYSALKAPSYSAPAAPSYSAPAAPS---YSSSASPSYSSPASSSYSAPAAPTYSAPK 331
Query: 556 LQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYG-PNVP-HQ 613
QS Y P Y PA P SY P+A SY P P +
Sbjct: 332 AQS-YSAP--AAPSYSAPAA---P-SYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYS 384
Query: 614 QQYPYATSGPTQQTY-----PSYGSAPAPDSYNQPPA---SAPGYPQQAGQAVPNYPQPG 665
+ S P +Y PSY SAPA SY+ P A SAP P + A P+Y P
Sbjct: 385 APASSSYSAPAAPSYSAPAAPSY-SAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPA 443
Query: 666 GQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGY-------GYQGTQDXXXXXXXXX 718
APSY A ++GY + +AY A +GY GY
Sbjct: 444 ---APSYSAPA-SSGY----SAARAYSAGSAAPASGYSAPKTSSGYSAPASSGSPAASSY 495
Query: 719 XXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY 771
T GY+ PA+ Y +S G+A+ A GYG + +P Y
Sbjct: 496 SAPASSTASSGYSAPASKSSGYARSEMDHQILGMAR--TAGGYG-SAAPSAAY 545
Score = 168 (64.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 99/413 (23%), Positives = 132/413 (31%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGP 446
P P+ P S P+ P +Y P Y + P P + P S+Y P
Sbjct: 180 PAAPSYSAPAAPSYSAPAAP-SYSAPAAPSYSA--PAAPSYSAPSAPSYSAQKTSSYSAP 236
Query: 447 --PNMXXXXXXXXXXXXXXXHVSDRPVSVSHSTSIPGHXXXXXXXXXXXXXXXXXNYNYG 504
P+ P + S+S P + +Y
Sbjct: 237 AAPSYHAPAAPASSYSAPAGPSYSAPAAPSYSA--PSYSAPASSYSALKAP------SYS 288
Query: 505 QPHTSEYXXXXXXXXXXXXXXXGHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQ 564
P Y Y +P Y + + P YS QS Y
Sbjct: 289 APAAPSYSAPAAPSYSSSASPS---YS---SPASSSYS--APAAPTYSAPKAQS-YSAP- 338
Query: 565 YGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYG-PNVP-HQQQYPYATSG 622
P Y PA P SY P+A SY P P + + S
Sbjct: 339 -AAPSYSAPAA---P-SYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSA 393
Query: 623 PTQQTY-----PSYGSAPAPDSYNQPPA---SAPGYPQQAGQAVPNYPQPGGQQAPSYGQ 674
P +Y PSY SAPA SY+ P A SAP P + A P+Y P APSY
Sbjct: 394 PAAPSYSAPAAPSY-SAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPA---APSYSA 449
Query: 675 VAPTAGYGQYTNTQQAYPEQPATSNAGY-------GYQGTQDXXXXXXXXXXXXXXXTGQ 727
A ++GY + +AY A +GY GY T
Sbjct: 450 PA-SSGY----SAARAYSAGSAAPASGYSAPKTSSGYSAPASSGSPAASSYSAPASSTAS 504
Query: 728 PGYAQPAATQPSYDQSASQSTAYGVAQ-----GTAA--AGYGKTVSPQPGYPQ 773
GY+ PA+ Y +S G+A+ G+AA A YG P P P+
Sbjct: 505 SGYSAPASKSSGYARSEMDHQILGMARTAGGYGSAAPSAAYGAASLPSPPCPK 557
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 97/402 (24%), Positives = 127/402 (31%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQN-PHY--PHLPYGNYP--PQQMAPRS 441
P P+ P S P+ P +Y P Y + P Y P P + P P AP +
Sbjct: 140 PAAPSYSAPAAPSYSAPAAP-SYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAA 198
Query: 442 -NYGGP--PNMXXXXXXXXXXXXXXXHVSDRPVSVSHSTSIPGHXXXXXXXXXXXXXXXX 498
+Y P P+ + + + + S S P
Sbjct: 199 PSYSAPAAPSYSAPAAPSYSAPSAPSYSAQK----TSSYSAPAAPSYHAPAAPASSYSAP 254
Query: 499 XNYNYGQPHTSEYXXXXXXX-XXXXXXXXGHGYDDNHAP-VQHPYG-GHSNS-QPVYSQG 554
+Y P Y Y AP P +S+S P YS
Sbjct: 255 AGPSYSAPAAPSYSAPSYSAPASSYSALKAPSYSAPAAPSYSAPAAPSYSSSASPSYSSP 314
Query: 555 GLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQ 614
S Y P Y P + QSY P++ SY
Sbjct: 315 A-SSSYSAP--AAPTYSAP----KAQSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSY 367
Query: 615 QYPYATSGPTQQTYPSYGSAPAPDSYNQPPA---SAPGYPQQAGQAVPNYPQPGGQQAPS 671
P A S PSY SAPA SY+ P A SAP P + A +Y P APS
Sbjct: 368 SAPAAPSYSAPAA-PSY-SAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPA---APS 422
Query: 672 YGQVAPTA-GYGQYTNTQQAYPEQPATSN-AGYGYQGTQDXXXXXXXXXXXXXXXTGQPG 729
Y AP A Y + P P+ S A GY + G
Sbjct: 423 YS--APAAPSYSAPAAPSYSAPAAPSYSAPASSGYSAARAYSAGSAAPASGYSAPKTSSG 480
Query: 730 YAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY 771
Y+ PA+ S +AS +A A TA++GY S GY
Sbjct: 481 YSAPAS---SGSPAASSYSA--PASSTASSGYSAPASKSSGY 517
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 62/204 (30%), Positives = 81/204 (39%)
Query: 599 QVPSAQSYGPNVPHQQQYPYAT------SGPTQQTY----PSYGSAPAPDSYNQPPA--- 645
++P AQ+Y P + + Q Y+ S P Y PSY SAPA SY+ P A
Sbjct: 48 EIP-AQAYAPPIVYNSQSSYSPAKDQGYSAPAAPVYSPAAPSY-SAPAAPSYSAPAAPSY 105
Query: 646 SAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSN-AGYGY 704
SAP P + A P+Y P APSY A ++ Y + P P+ S A Y
Sbjct: 106 SAPAAPSYSAPAAPSYSAPA---APSYSAPA-SSSYSAPAAPSYSAPAAPSYSAPAAPSY 161
Query: 705 QGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKT 764
P Y+ PAA PSY SA + +Y AA Y
Sbjct: 162 SAP--ASSSYSAPAAPSYSAPAAPSYSAPAA--PSY--SAPAAPSYSAP---AAPSYSAP 212
Query: 765 VSPQ---PGYPQYDS--TQMYAAP 783
+P P P Y + T Y+AP
Sbjct: 213 AAPSYSAPSAPSYSAQKTSSYSAP 236
>FB|FBgn0262735 [details] [associations]
symbol:Imp "IGF-II mRNA-binding protein" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IMP] [GO:0051124 "synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IEP]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
SMART:SM00322 GO:GO:0000166 EMBL:AE014298 Gene3D:3.30.70.330
GO:GO:0051124 GO:GO:0007283 GO:GO:0003723 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 CTD:32009 UniGene:Dm.3773 GeneID:32009
KEGG:dme:Dmel_CG1691 FlyBase:FBgn0262735 GenomeRNAi:32009
NextBio:776342 RefSeq:NP_001036268.2 ProteinModelPortal:Q0KHU2
SMR:Q0KHU2 STRING:Q0KHU2 PRIDE:Q0KHU2 UCSC:CG1691-RI
OrthoDB:EOG4RBP0X PhylomeDB:Q0KHU2 Bgee:Q0KHU2 Uniprot:Q0KHU2
Length = 588
Score = 166 (63.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 65/225 (28%), Positives = 97/225 (43%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR-DADADPHAAT-RPVEIIGTLSNIDKAE 263
+PNN VG +IG G IR + S A ++I DAD T R V I+GT KA+
Sbjct: 324 IPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQ 383
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+I + E G VE+ V + +VG IIG+GG+ ++ LQ
Sbjct: 384 YMIFEKMRE-----------EGFMCG-TDDVRLTVELLVASSQVGRIIGKGGQNVRELQR 431
Query: 324 RSGARIQLIPQHL--PEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFN 381
+G+ I+L P+H P G +E V + G ++ AQ I+ ++ T P
Sbjct: 432 VTGSVIKL-PEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLSTNPPPITK---K 487
Query: 382 QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP-QRGPYPSQNPHYP 425
Q+A + ++ S SQ P Q+ P Q H P
Sbjct: 488 QKAAKEQLQQQQQSLAGAASSGSQQQQPQSPSQQQALPPQLHHQP 532
Score = 112 (44.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 42/168 (25%), Positives = 75/168 (44%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I V + VG +IG+ G TIR + S A++ + R + + + + I G N A
Sbjct: 96 RILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVG--SLEKSITIYGNPENCTNA 153
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
K I V+ + + +G + + S ++I N +G IIG+ G TIK +
Sbjct: 154 CKRILEVMQQEAISTN-----KGELSPECSEIC--LKILAHNNLIGRIIGKSGNTIKRIM 206
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+ +I + + + ERI+ V G + + A+ I L Q+
Sbjct: 207 QDTDTKITVSSIN-DINSFNLERIITVKGLIENMSRAENQISTKLRQS 253
Score = 63 (27.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 603 AQSYGPNVPHQQQYPYATSGPTQ---QTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP 659
+Q P P QQQ + P Q Q S S+ P +++Q AS Q Q P
Sbjct: 510 SQQQQPQSPSQQQ-----ALPPQLHHQPVSSASSSSTPPAHHQQQASTAATSHQLQQQQP 564
Query: 660 NYPQPGGQQAPSYGQ 674
+ P PG A + Q
Sbjct: 565 SPPPPGNATAAAAQQ 579
>FB|FBgn0261552 [details] [associations]
symbol:ps "pasilla" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEP] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
GO:GO:0000398 HSSP:Q9UNW9 FlyBase:FBgn0261552 EMBL:BT001623
ProteinModelPortal:Q8IGS7 PRIDE:Q8IGS7 InParanoid:Q8IGS7
ArrayExpress:Q8IGS7 Bgee:Q8IGS7 Uniprot:Q8IGS7
Length = 605
Score = 182 (69.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 65/206 (31%), Positives = 98/206 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 98 TYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEA 157
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRGGE 316
I + I I E P L + + T Q +QV+I VPN G+IIG+GG
Sbjct: 158 IMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGA 212
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTL 376
IK ++ SG+ +Q+ + P +ER + + GD + A +MI LS+ V
Sbjct: 213 FIKQIKEESGSYVQISQK--PTDVSLQERCITIIGDKENNKNACKMI---LSKIVEDPQ- 266
Query: 377 SGGFNQQAYRPRVPTGP-PQWGPRGS 401
SG +Y +GP + P GS
Sbjct: 267 SGTCLNVSYAD--VSGPVANFNPTGS 290
>UNIPROTKB|G3N2N4 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048 KO:K14944
EMBL:DAAA02052552 EMBL:DAAA02052553 RefSeq:XP_001257255.3
Ensembl:ENSBTAT00000065126 GeneID:790874 KEGG:bta:790874
NextBio:20930383 Uniprot:G3N2N4
Length = 385
Score = 152 (58.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 6 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 56
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 57 PNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 114
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 115 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 148
Score = 120 (47.3 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 281 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 340
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 341 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 377
Score = 100 (40.3 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 53 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 111
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 112 VELIIQKIQEDPQSGS 127
Score = 52 (23.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 132 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 188
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 189 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 248
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 249 ASGSTAGGTA-GTFALG 264
>UNIPROTKB|F1MBI6 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:DAAA02052552
EMBL:DAAA02052553 IPI:IPI01028075 Ensembl:ENSBTAT00000031237
Uniprot:F1MBI6
Length = 389
Score = 143 (55.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 42/107 (39%), Positives = 59/107 (55%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
+QV+I VPN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q
Sbjct: 54 KQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQ 111
Query: 356 IEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
A E+I Q ++ SG +Y V TGP P GS
Sbjct: 112 NRKAVELI----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 152
Score = 120 (47.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 285 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 344
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 345 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 381
Score = 100 (40.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 57 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 115
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 116 VELIIQKIQEDPQSGS 131
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 136 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 192
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 193 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 252
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 253 ASGSTAGGTA-GTFALG 268
>UNIPROTKB|F1NP94 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048
OMA:FRQNNTA EMBL:AADN02003296 EMBL:AADN02003297 EMBL:AADN02003298
EMBL:AADN02003299 EMBL:AADN02003300 EMBL:AADN02003301
EMBL:AADN02003302 EMBL:AADN02003303 EMBL:AADN02003304
EMBL:AADN02003305 EMBL:AADN02003306 EMBL:AADN02003307
EMBL:AADN02003308 EMBL:AADN02003309 EMBL:AADN02003310
EMBL:AADN02003311 EMBL:AADN02003312 EMBL:AADN02003313
EMBL:AADN02003314 EMBL:AADN02003315 IPI:IPI00584544
Ensembl:ENSGALT00000016013 ArrayExpress:F1NP94 Uniprot:F1NP94
Length = 413
Score = 152 (58.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 34 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 84
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 85 PNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 142
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 143 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 176
Score = 120 (47.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 309 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 368
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 369 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 405
Score = 100 (40.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 81 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 139
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 140 VELIIQKIQEDPQSGS 155
Score = 52 (23.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 160 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 216
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 217 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 276
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 277 ASGSTAGGTA-GTFALG 292
>UNIPROTKB|B7Z770 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003729 GO:GO:0000398 IPI:IPI00019244
UniGene:Hs.31588 HGNC:HGNC:7886 HOVERGEN:HBG082048 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 EMBL:AK301526 ProteinModelPortal:B7Z770
SMR:B7Z770 STRING:B7Z770 PRIDE:B7Z770 Ensembl:ENST00000267422
ArrayExpress:B7Z770 Bgee:B7Z770 Uniprot:B7Z770
Length = 385
Score = 151 (58.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 6 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 56
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 57 PNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 114
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 115 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 148
Score = 120 (47.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 281 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 340
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 341 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 377
Score = 99 (39.9 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 53 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 111
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 112 VELIIQKIQEDPQSGS 127
Score = 52 (23.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 132 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 188
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 189 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 248
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 249 ASGSTAGGTA-GTFALG 264
>UNIPROTKB|F1SGT5 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048
OMA:FRQNNTA EMBL:CT826400 Ensembl:ENSSSCT00000031969 Uniprot:F1SGT5
Length = 417
Score = 152 (58.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 38 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 88
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 89 PNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 146
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 147 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 180
Score = 120 (47.3 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 313 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 372
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 373 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 409
Score = 100 (40.3 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 85 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 143
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 144 VELIIQKIQEDPQSGS 159
Score = 52 (23.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 164 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 220
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 221 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 280
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 281 ASGSTAGGTA-GTFALG 296
>WB|WBGene00019692 [details] [associations]
symbol:M01A10.1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014 PROSITE:PS50084
SMART:SM00322 GO:GO:0006898 GO:GO:0003723 eggNOG:NOG300923
InterPro:IPR015096 Pfam:PF09005 GeneTree:ENSGT00650000093048
EMBL:FO081508 RefSeq:NP_491627.2 ProteinModelPortal:P91393
SMR:P91393 STRING:P91393 PaxDb:P91393 EnsemblMetazoa:M01A10.1
GeneID:187350 KEGG:cel:CELE_M01A10.1 UCSC:M01A10.1 CTD:187350
WormBase:M01A10.1 HOGENOM:HOG000018892 InParanoid:P91393
OMA:KARIMET NextBio:934978 Uniprot:P91393
Length = 586
Score = 175 (66.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 62/243 (25%), Positives = 111/243 (45%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
MS +++VP + VG ++G G I+ + + KIQ D D DP R + +IG + +
Sbjct: 237 MSLQVKVPRSTVGAIMGLQGSNIKKISNETETKIQFMPD-D-DPKLMERTLVVIGNKNKV 294
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+L+ ++ EA++ A+ + +P K GL+IGRGGETI+
Sbjct: 295 YVCARLLQKIV-EANS-------------ENANTPISLFYMLIPASKCGLVIGRGGETIR 340
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+ SGA ++ P +++ V + G Q+E A+ +I+ + + P+T
Sbjct: 341 QINKESGAYCEMSRD--PSISAIEKQFV-IRGSETQVEHAKHLIRVKVGD-IPPNTPY-- 394
Query: 380 FNQQAYRP-----RVPTGPPQWG--PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNY 432
N +A +P + PT W P + ++ PQ +P+ + L Y ++
Sbjct: 395 INTRAAQPLQFSHQNPTAIDSWRAQPFTTQHQNSLSLPQPQAHQFPNLMAYSARLGYQSH 454
Query: 433 PPQ 435
PPQ
Sbjct: 455 PPQ 457
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/168 (27%), Positives = 86/168 (51%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G I+ + SG ++QI + + R V+I G NI+ A+
Sbjct: 56 VSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVAEPSTTGY---RSVDIYGISENIEVAK 112
Query: 264 KLINAVIAEADAGGS---PSLVARGLATAQASGAAE-QVEIKVPNEKVGLIIGRGGETIK 319
KLIN V+A P V + S +++ + I +P K G IIG+ GE ++
Sbjct: 113 KLINEVVARGRKLSQEPLPCSVPQFQPIPAVSNSSKVTIIIPIPANKCGAIIGKKGEQMR 172
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
L++ + LI ++ D K +++TG +++E A+ ++ ++L
Sbjct: 173 KLRSWTNCDFILIQEN-NIADSVKP--LQITGQPKEVEHAKALVADIL 217
Score = 150 (57.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 44/165 (26%), Positives = 84/165 (50%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQ-YNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
I +P NK G +IGK G+ +R L+ + + I I + AD + +P++I G ++ A
Sbjct: 153 IPIPANKCGAIIGKKGEQMRKLRSWTNCDFILIQENNIAD---SVKPLQITGQPKEVEHA 209
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ L+ ++ D G G+A + AA +++KVP VG I+G G IK +
Sbjct: 210 KALVADIL---D--GFDECPPAGMA-GNSPVAAMSLQVKVPRSTVGAIMGLQGSNIKKIS 263
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+ +IQ +P P+ ER + V G+ ++ + ++++++
Sbjct: 264 NETETKIQFMPDDDPK---LMERTLVVIGNKNKVYVCARLLQKIV 305
Score = 121 (47.7 bits), Expect = 0.00064, P = 0.00064
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
+ + +P E VGL+IGR G I+ + +SG R+Q++ + P G R V + G I
Sbjct: 53 KASVSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVAE--PSTTGY--RSVDIYGISENI 108
Query: 357 EIAQEMIKEVLSQ 369
E+A+++I EV+++
Sbjct: 109 EVAKKLINEVVAR 121
>UNIPROTKB|I3LRN5 [details] [associations]
symbol:PCBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 OMA:MSSSDAG
EMBL:FP102591 Ensembl:ENSSSCT00000026653 Uniprot:I3LRN5
Length = 404
Score = 124 (48.7 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 44/118 (37%), Positives = 60/118 (50%)
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
SPS+V GL + + E + VPN+ +G +IGR G I ++ SGA I++ Q
Sbjct: 228 SPSMVPAGLDPGTQTSSQEFL---VPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ--A 282
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR-VPTGPP 394
EG G ER V +TG I +AQ +I L +T + ST SGG A P PP
Sbjct: 283 EGAG--ERHVTITGSPVSIALAQYLITACL-ETAK-ST-SGGTPSSAPTDLPAPFSPP 335
Score = 95 (38.5 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P ++ G LIGKAG I+ ++ +GA++Q+ D P++ R V + G I
Sbjct: 105 RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA--GDLLPNSTERAVTVSGVPDAIILC 162
Query: 263 EKLINAVIAEADAGGS 278
+ I AVI E+ G+
Sbjct: 163 VRQICAVILESPPKGA 178
>MGI|MGI:104297 [details] [associations]
symbol:Nova1 "neuro-oncological ventral antigen 1"
species:10090 "Mus musculus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP;IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IC]
[GO:0007399 "nervous system development" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:104297 GO:GO:0005634 GO:GO:0003729
GO:GO:0000398 GeneTree:ENSGT00650000093048 CTD:4857
eggNOG:NOG258094 HOGENOM:HOG000007833 HOVERGEN:HBG082048 KO:K14944
OMA:FRQNNTA ChiTaRS:NOVA1 EMBL:AC108802 EMBL:AC156636 EMBL:AF232828
EMBL:AK047565 IPI:IPI00659424 RefSeq:NP_067336.1 UniGene:Mm.247195
ProteinModelPortal:Q9JKN6 SMR:Q9JKN6 PhosphoSite:Q9JKN6
PaxDb:Q9JKN6 PRIDE:Q9JKN6 Ensembl:ENSMUST00000021438 GeneID:664883
KEGG:mmu:664883 UCSC:uc007nmd.2 InParanoid:Q9JKN6 NextBio:426120
Bgee:Q9JKN6 CleanEx:MM_NOVA1 Genevestigator:Q9JKN6
GermOnline:ENSMUSG00000021047 Uniprot:Q9JKN6
Length = 507
Score = 152 (58.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 128 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 178
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 179 PNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 236
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 237 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 270
Score = 120 (47.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 403 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 462
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 463 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 499
Score = 100 (40.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 175 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 233
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 234 VELIIQKIQEDPQSGS 249
Score = 94 (38.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 112
Query: 263 EKLINAVIAE 272
I I E
Sbjct: 113 HGFIAEKIRE 122
Score = 52 (23.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 254 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 310
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 311 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 370
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 371 ASGSTAGGTA-GTFALG 386
>UNIPROTKB|D4AAF8 [details] [associations]
symbol:Nova1 "RNA-binding protein Nova-1" species:10116
"Rattus norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0003729 GO:GO:0000398 EMBL:CH473947
GeneTree:ENSGT00650000093048 CTD:4857 KO:K14944 UniGene:Rn.232418
IPI:IPI00556974 RefSeq:XP_001075031.1 RefSeq:XP_234098.2 SMR:D4AAF8
Ensembl:ENSRNOT00000050372 GeneID:298992 KEGG:rno:298992
NextBio:644625 Uniprot:D4AAF8
Length = 507
Score = 152 (58.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 128 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 178
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 179 PNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 236
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 237 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 270
Score = 120 (47.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 403 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 462
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 463 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 499
Score = 100 (40.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 175 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 233
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 234 VELIIQKIQEDPQSGS 249
Score = 94 (38.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 112
Query: 263 EKLINAVIAE 272
I I E
Sbjct: 113 HGFIAEKIRE 122
Score = 52 (23.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 254 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 310
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 311 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 370
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 371 ASGSTAGGTA-GTFALG 386
>UNIPROTKB|G3X7R5 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048
OMA:FRQNNTA EMBL:DAAA02052552 EMBL:DAAA02052553
Ensembl:ENSBTAT00000044049 Uniprot:G3X7R5
Length = 507
Score = 152 (58.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 128 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 178
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 179 PNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 236
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 237 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 270
Score = 120 (47.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 403 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 462
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 463 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 499
Score = 100 (40.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 175 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 233
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 234 VELIIQKIQEDPQSGS 249
Score = 93 (37.8 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 263 EKLINAVIAE 272
I I E
Sbjct: 113 HGFIAEKIRE 122
Score = 52 (23.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 254 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 310
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 311 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 370
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 371 ASGSTAGGTA-GTFALG 386
>UNIPROTKB|J9NXS6 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048 CTD:4857
KO:K14944 OMA:FRQNNTA EMBL:AAEX03005630 EMBL:AAEX03005631
RefSeq:XP_547754.1 Ensembl:ENSCAFT00000044255 GeneID:490632
KEGG:cfa:490632 Uniprot:J9NXS6
Length = 507
Score = 152 (58.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 128 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 178
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 179 PNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 236
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 237 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 270
Score = 120 (47.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 403 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 462
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 463 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 499
Score = 100 (40.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 175 KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 233
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 234 VELIIQKIQEDPQSGS 249
Score = 93 (37.8 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 263 EKLINAVIAE 272
I I E
Sbjct: 113 HGFIAEKIRE 122
Score = 52 (23.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 254 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 310
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 311 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 370
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 371 ASGSTAGGTA-GTFALG 386
>UNIPROTKB|P51513 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007626 "locomotory behavior"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0008380 GO:GO:0007268
GO:GO:0003729 GO:GO:0007626 GO:GO:0003723 EMBL:CH471078
GO:GO:0000398 EMBL:U04840 EMBL:AK289639 EMBL:AK291022 EMBL:BC075038
EMBL:BC075039 EMBL:Z70771 IPI:IPI00019244 IPI:IPI00221187
IPI:IPI00221188 IPI:IPI00816603 PIR:I38489 RefSeq:NP_002506.2
RefSeq:NP_006480.2 RefSeq:NP_006482.1 UniGene:Hs.31588 PDB:1DT4
PDB:2ANN PDB:2ANR PDBsum:1DT4 PDBsum:2ANN PDBsum:2ANR
ProteinModelPortal:P51513 SMR:P51513 IntAct:P51513
MINT:MINT-1381951 STRING:P51513 PhosphoSite:P51513 DMDM:1709303
PRIDE:P51513 Ensembl:ENST00000344429 Ensembl:ENST00000539517
GeneID:4857 KEGG:hsa:4857 UCSC:uc001wpy.3 UCSC:uc001wqa.3
UCSC:uc001wqb.3 CTD:4857 GeneCards:GC14M026915 H-InvDB:HIX0037755
HGNC:HGNC:7886 HPA:HPA004155 MIM:602157 neXtProt:NX_P51513
PharmGKB:PA31688 eggNOG:NOG258094 HOGENOM:HOG000007833
HOVERGEN:HBG082048 InParanoid:P51513 KO:K14944 OMA:FRQNNTA
ChiTaRS:NOVA1 EvolutionaryTrace:P51513 GenomeRNAi:4857
NextBio:18710 ArrayExpress:P51513 Bgee:P51513 CleanEx:HS_NOVA1
Genevestigator:P51513 GermOnline:ENSG00000139910 Uniprot:P51513
Length = 510
Score = 151 (58.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 131 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 181
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 182 PNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 239
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 240 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 273
Score = 120 (47.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 278 SPSLVARGLATAQAS-GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + L T +++ G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 406 SPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 465
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVR 372
+P G++ R V +TG + AQ +I + ++ Q VR
Sbjct: 466 FVP---GTRNRKVTITGTPAATQAAQYLITQRITYEQGVR 502
Score = 99 (39.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 178 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 236
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 237 VELIIQKIQEDPQSGS 252
Score = 80 (33.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 23/73 (31%), Positives = 35/73 (47%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR---DADADPHAATRPVEIIGTLSNI 259
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEAL 112
Query: 260 DKAEKLINAVIAE 272
+ I I E
Sbjct: 113 NAVHGFIAEKIRE 125
Score = 52 (23.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 36/137 (26%), Positives = 45/137 (32%)
Query: 630 SYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--QAPSYGQVAPTAGYGQYTNT 687
SY + P + N P +P Y A + +P G A G A A +T
Sbjct: 257 SYANVTGPVA-NSNPTGSP-YANTA-EVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGN 313
Query: 688 QQAYPEQPATSNAGYGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQ-PSY--DQS 743
+ A YGY T A AA +Y + S
Sbjct: 314 DLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEAS 373
Query: 744 ASQSTAYGVAQGTAAAG 760
AS STA G A GT A G
Sbjct: 374 ASGSTAGGTA-GTFALG 389
>ZFIN|ZDB-GENE-030131-2317 [details] [associations]
symbol:ewsr1a "Ewing sarcoma breakpoint region 1a"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0007067 "mitosis" evidence=IMP]
[GO:0021954 "central nervous system neuron development"
evidence=IMP] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-030131-2317 GO:GO:0007067 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0021954
eggNOG:NOG240581 HOGENOM:HOG000038010 HOVERGEN:HBG000970 KO:K13209
OrthoDB:EOG42NJ15 EMBL:BC068397 IPI:IPI00488733
RefSeq:NP_001108610.1 UniGene:Dr.5648 ProteinModelPortal:Q6NUX1
PRIDE:Q6NUX1 GeneID:323597 KEGG:dre:323597 CTD:323597
NextBio:20808342 ArrayExpress:Q6NUX1 Bgee:Q6NUX1 Uniprot:Q6NUX1
Length = 624
Score = 172 (65.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 81/253 (32%), Positives = 94/253 (37%)
Query: 538 QHPYGGH--SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQ-SYXXXXXXXXXXXX 594
Q YG + SQP Y QG QS Q YG Y PA T Q S
Sbjct: 14 QQGYGSYPAQPSQPGYGQGTQQSYGQQQGYGS--YSQPADSTYSQTSGSSSSYGQQPYGS 71
Query: 595 XYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA 654
Y Q P++ SY Q Y G +Y S S A S + S G
Sbjct: 72 SYGQQPPASGSYNAASATPQGYTQPVQGYGSSSYDS--STAAASSTSNTQTSYGGQASYG 129
Query: 655 GQ-AVPNYPQPGGQQAP--SY--GQVAPTAGYGQYTNTQQAYPEQPATSNAGYG-YQGTQ 708
Q A P Y Q AP SY G P AGY Q + +QQ P+Q S G YQG Q
Sbjct: 130 TQSAYPGYGQQPAAAAPPSSYSSGSQQP-AGYEQSSYSQQ--PQQSTYSQQQQGGYQGQQ 186
Query: 709 DXXXXXXXXXXXXXXXTGQPGYAQ--PAATQP---SYDQ-SASQSTAYGVAQGTAAAGYG 762
P Q P++ P SY Q SASQ YG QG+ GYG
Sbjct: 187 GGYGQQSSYSQQGGYQQTPPQQQQAPPSSYAPPSGSYGQPSASQ---YG-QQGSTGGGYG 242
Query: 763 KT-VSPQPGYPQY 774
++ P Y Y
Sbjct: 243 QSDYKPPNQYGSY 255
Score = 152 (58.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 69/242 (28%), Positives = 91/242 (37%)
Query: 527 GHGYDDNHAPVQHPYGGHSN-SQPVYSQ-GGLQSGYHQHQYGKPPYGM--PAQGTQPQSY 582
G G ++ Q YG +S + YSQ G S Y Q YG YG PA G+ +
Sbjct: 30 GQGTQQSYGQ-QQGYGSYSQPADSTYSQTSGSSSSYGQQPYGSS-YGQQPPASGSYNAAS 87
Query: 583 XXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQ-QYPYATSGPTQQTYPSYGSAPAPDSYN 641
S S+ + + + Q Y S TQ YP YG PA +
Sbjct: 88 ATPQGYTQPVQGYGSSSYDSSTAAASSTSNTQTSYGGQASYGTQSAYPGYGQQPAAAA-- 145
Query: 642 QPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNA 700
PP+S + G Q AG +Y Q QQ+ +Y Q G Y Q Y +Q + S
Sbjct: 146 -PPSSYSSGSQQPAGYEQSSYSQQP-QQS-TYSQQQQ----GGYQGQQGGYGQQSSYSQQ 198
Query: 701 GYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAG 760
G GYQ T + Y QP+A+Q Y Q S YG +
Sbjct: 199 G-GYQQTPPQQQQAPPSSYAPPSGS----YGQPSASQ--YGQQGSTGGGYGQSDYKPPNQ 251
Query: 761 YG 762
YG
Sbjct: 252 YG 253
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 66/205 (32%), Positives = 81/205 (39%)
Query: 596 YQSQVPSAQSYGPNVPHQ--QQYPYAT-SGPTQQTYP-------SYGSAPAPDSYNQPPA 645
Y +Q PS YG QQ Y + S P TY SYG P SY Q P
Sbjct: 20 YPAQ-PSQPGYGQGTQQSYGQQQGYGSYSQPADSTYSQTSGSSSSYGQQPYGSSYGQQPP 78
Query: 646 SAPGYPQQAGQAVPN-YPQP-GGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPA--TSNAG 701
++ Y A A P Y QP G + SY + TA +NTQ +Y Q + T +A
Sbjct: 79 ASGSY--NAASATPQGYTQPVQGYGSSSYD--SSTAAASSTSNTQTSYGGQASYGTQSAY 134
Query: 702 YGYQGTQDXXXXXXXXXXXXXXXTGQP-GYAQPAATQPSYDQSASQSTAYGVAQGTAAAG 760
GY G Q QP GY Q + +Q + SQ G QG G
Sbjct: 135 PGY-GQQPAAAAPPSSYSSGSQ---QPAGYEQSSYSQQPQQSTYSQQQQGGY-QGQQG-G 188
Query: 761 YGK--TVSPQPGYPQYDSTQMYAAP 783
YG+ + S Q GY Q Q A P
Sbjct: 189 YGQQSSYSQQGGYQQTPPQQQQAPP 213
Score = 129 (50.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 64/217 (29%), Positives = 74/217 (34%)
Query: 502 NYGQ--PHTSEYXXXXXXXXXXXXXXXGHG---YDDNHAPVQHPYGGHSNSQPVYSQGGL 556
+YGQ P + Y G+G YD + A SN+Q Y GG
Sbjct: 72 SYGQQPPASGSYNAASATPQGYTQPVQGYGSSSYDSSTAAASST----SNTQTSY--GG- 124
Query: 557 QSGYHQHQYGKPPYGM-PAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQ 615
Q+ Y Q P YG PA P SY SQ P +Y QQQ
Sbjct: 125 QASYGT-QSAYPGYGQQPAAAAPPSSYSSGSQQPAGYEQSSYSQQPQQSTYS----QQQQ 179
Query: 616 YPYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQ 674
Y G Q Y S Y Q PP P +Y QP Q YGQ
Sbjct: 180 GGY--QGQ-QGGYGQQSSYSQQGGYQQTPPQQQQAPPSSYAPPSGSYGQPSASQ---YGQ 233
Query: 675 VAPTAG-YGQ--YTNTQQAYPEQPATSNAGYGYQGTQ 708
T G YGQ Y Q +P N G GY G +
Sbjct: 234 QGSTGGGYGQSDYKPPNQYGSYRPDHQNGG-GYSGPE 269
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 55/162 (33%), Positives = 65/162 (40%)
Query: 628 YPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNT 687
Y SYG A + Y YP Q Q P Y Q G QQ SYGQ GYG Y+
Sbjct: 5 YNSYGQAGSQQGYGS-------YPAQPSQ--PGYGQ-GTQQ--SYGQ---QQGYGSYSQP 49
Query: 688 QQAYPEQPATSNAGYGYQ--GTQDXXXXXXXXXXXXXXXTGQPGYAQPAAT--QPSYDQS 743
+ Q + S++ YG Q G+ T Q GY QP SYD S
Sbjct: 50 ADSTYSQTSGSSSSYGQQPYGSSYGQQPPASGSYNAASATPQ-GYTQPVQGYGSSSYDSS 108
Query: 744 --ASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAP 783
A+ ST+ A YG T S PGY Q + AAP
Sbjct: 109 TAAASSTSNTQTSYGGQASYG-TQSAYPGYGQQPAA---AAP 146
Score = 42 (19.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 400 GSHPSQPMAYDYPQ--RGPYPSQNPHYPHL-PYGNYPPQQMAPRSNYGGPP 447
GS+P+QP Y Q + Y Q + + P + Q S+YG P
Sbjct: 18 GSYPAQPSQPGYGQGTQQSYGQQQGYGSYSQPADSTYSQTSGSSSSYGQQP 68
>UNIPROTKB|F1NK13 [details] [associations]
symbol:SS18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 OMA:IQCIMDS
EMBL:AADN02021370 EMBL:AADN02021371 IPI:IPI00822142
Ensembl:ENSGALT00000024397 ArrayExpress:F1NK13 Uniprot:F1NK13
Length = 420
Score = 148 (57.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 58/169 (34%), Positives = 66/169 (39%)
Query: 529 GYDDNHAPVQHPYGGHSN----SQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
G +D + Q+ +GG +Q Y G GY Q Y + Y P + + Y
Sbjct: 268 GQEDYYGD-QYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG 326
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPP 644
YQ P Q Y P P QQQYP G QQ YP P S P
Sbjct: 327 GNSQYGQQQDAYQGP-PQQQGY-P--PQQQQYP----G--QQGYPGQQQGYGP-SQGGPG 375
Query: 645 ASAPGYPQQAGQAVPNY-P-QPGGQQAPSYGQVAPTAGY--GQYTNTQQ 689
P YPQ GQ Y P QPG Q P Q P GY GQY N QQ
Sbjct: 376 PQYPNYPQGQGQQYGGYRPTQPGPPQPP---QQRPY-GYDQGQYGNYQQ 420
Score = 111 (44.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 73/252 (28%), Positives = 88/252 (34%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYG-KPPYGM-PAQGTQ--PQSYXXXXXXXXXXXXXYQSQV 600
S S PV +Q + G YG +P M P QG Q YQ Q
Sbjct: 172 SQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQAGGQHYQGQQ 231
Query: 601 PS----AQ-SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY-NQPPASAPGYPQQA 654
P Q + G ++ Q+Q P P QQ P S D Y +Q G P+
Sbjct: 232 PPMGMMGQVNQGNHMMGQRQIP--PYRPPQQGPPQQYSGQE-DYYGDQYSHGGQGPPEGM 288
Query: 655 GQAV-PNYPQPGGQQAPSYGQVAPTAGYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
Q P+ G Q PSY P GY + Y ++ Q Y E N+ YG Q QD
Sbjct: 289 NQQYYPDGHNDYGYQQPSY----PEQGYDRPYEDSSQHYYEG---GNSQYGQQ--QDAYQ 339
Query: 713 XXXXXXXX---XXXXTGQPGY-AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQ 768
GQ GY Q PS Q Y QG GY T Q
Sbjct: 340 GPPQQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPT---Q 396
Query: 769 PGYPQYDSTQMY 780
PG PQ + Y
Sbjct: 397 PGPPQPPQQRPY 408
Score = 105 (42.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 63/206 (30%), Positives = 71/206 (34%)
Query: 530 YDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQH-QYGKPPYGMPAQGTQPQSYXXXXXX 588
Y+ A QH Y G P+ G + G H Q PPY P QG PQ Y
Sbjct: 217 YNMPQAGGQH-YQGQQ--PPMGMMGQVNQGNHMMGQRQIPPYRPPQQGP-PQQYSGQEDY 272
Query: 589 XXXXXXX---------YQSQVPSAQS-YG---PNVPHQ-QQYPYATSGPTQQTYPSYGS- 633
Q P + YG P+ P Q PY S +Q Y S
Sbjct: 273 YGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDS--SQHYYEGGNSQ 330
Query: 634 -APAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQA--PSYGQVAPT-----AG----Y 681
D+Y PP GYP Q Q PG QQ PS G P G Y
Sbjct: 331 YGQQQDAYQGPPQQQ-GYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQY 389
Query: 682 GQYTNTQQAYPEQPATSNAGYGY-QG 706
G Y TQ P+ P YGY QG
Sbjct: 390 GGYRPTQPGPPQPP--QQRPYGYDQG 413
Score = 66 (28.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 34/141 (24%), Positives = 55/141 (39%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 110 LVG-GGPPAPHMQNQMNGQMPEGPNHMPMQGPGPNQ--LNMTNSSMNMPSSSHGSMGGYN 166
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGS---HPSQ-PMAYDYPQRGPYPSQNPH 423
+V PS+ S NQ P G +GPR + P+Q PM + P Y
Sbjct: 167 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQAG 223
Query: 424 YPHLPYGNYPPQQMAPRSNYG 444
H G PP M + N G
Sbjct: 224 GQHYQ-GQQPPMGMMGQVNQG 243
Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 19/66 (28%), Positives = 24/66 (36%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNY 443
+ P GP Q S + P + + G Y P +P N Q P NY
Sbjct: 134 HMPMQGPGPNQLNMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 192
Query: 444 GGPPNM 449
G PNM
Sbjct: 193 GPRPNM 198
Score = 45 (20.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 13/47 (27%), Positives = 18/47 (38%)
Query: 399 RGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG 445
+G P M Q Q P+ P PPQQ + + +Y G
Sbjct: 228 QGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYG 274
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 22/74 (29%), Positives = 28/74 (37%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSH----PSQPMAYDYPQRG------PYPS-QNPHYPHLPY 429
N Q+ P PT GP G P P +++ G P P QN +P
Sbjct: 71 NMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMSSDGLVGGGPPAPHMQNQMNGQMPE 130
Query: 430 G-NYPPQQMAPRSN 442
G N+ P Q P N
Sbjct: 131 GPNHMPMQ-GPGPN 143
>ZFIN|ZDB-GENE-041221-2 [details] [associations]
symbol:prnpb "prion protein b" species:7955 "Danio
rerio" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0016338 "calcium-independent
cell-cell adhesion" evidence=IMP] [GO:0007156 "homophilic cell
adhesion" evidence=IDA] [GO:0055113 "epiboly involved in
gastrulation with mouth forming second" evidence=IGI;IMP]
[GO:2000047 "regulation of cell-cell adhesion mediated by cadherin"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IGI]
[GO:0009986 "cell surface" evidence=IDA] InterPro:IPR022416
ZFIN:ZDB-GENE-041221-2 GO:GO:0005886 GO:GO:0009986 GO:GO:0051260
GO:GO:0007156 GO:GO:0055113 GO:GO:0016338 Gene3D:1.10.790.10
SUPFAM:SSF54098 EMBL:AJ850286 IPI:IPI00485089 UniGene:Dr.90045
ProteinModelPortal:Q5K0E1 PRIDE:Q5K0E1 HOVERGEN:HBG056090
InParanoid:Q5K0E1 Bgee:Q5K0E1 GO:GO:2000047 Uniprot:Q5K0E1
Length = 606
Score = 125 (49.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 76/247 (30%), Positives = 91/247 (36%)
Query: 542 GGHSNSQPVYSQGGLQSGYHQHQY---GKPPYG--MPAQGTQPQSYXXXXXXXXXXXXXY 596
GG+ N P +GG G + +Q G P G P+ G P Y Y
Sbjct: 131 GGNPNQYP--GRGGYNPGGYPNQNPGAGSYPAGGSYPSAGGNPNQYPGRGGTSPAG---Y 185
Query: 597 QSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY-NQPPAS----APG-Y 650
+Q P A SY P YP A P Q YP G + P Y NQ P + A G Y
Sbjct: 186 PNQNPGAGSY----PAGGSYPSAGGNPNQ--YPGRGGSN-PGGYPNQNPGAGSYPAGGSY 238
Query: 651 PQQAGQAVPN-YPQPGGQQAPSYGQVAPTAG-Y--GQYTNTQQAYPEQPATSNAGYGYQG 706
P G PN YP GG P AG Y G Y N YP SN G G
Sbjct: 239 PSAGGN--PNQYPGRGGSSPGGNPNQNPGAGTYAGGGYPNQ---YPGGGGYSNQNPGRSG 293
Query: 707 TQDXXXXXXXXXXXXXXXTGQPG-Y--AQPAAT--QPSYDQSAS-QSTAYGVAQGTAAAG 760
GQPG Y A P+A P+++ + S YG + G G
Sbjct: 294 YSPGGYPGAGSYPVRNA--GQPGVYPGAHPSAGGGYPNWNPNNQILSPRYGGSFG--GGG 349
Query: 761 YGKTVSP 767
+G SP
Sbjct: 350 FGTGGSP 356
Score = 120 (47.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 68/246 (27%), Positives = 85/246 (34%)
Query: 542 GGHSNSQPVYSQGGLQ-SGYHQHQYGKPPY----GMPAQGTQPQSYXXXXXXXXXXXXXY 596
GG+ N P +GG +GY G Y P+ G P Y Y
Sbjct: 168 GGNPNQYP--GRGGTSPAGYPNQNPGAGSYPAGGSYPSAGGNPNQYPGRGGSNPGG---Y 222
Query: 597 QSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQ 656
+Q P A SY P YP A P Q YP G + + NQ P + Y AG
Sbjct: 223 PNQNPGAGSY----PAGGSYPSAGGNPNQ--YPGRGGSSPGGNPNQNPGAGT-Y---AGG 272
Query: 657 AVPN-YPQPGG--QQAPSYGQVAPTA--GYGQYT--NTQQ--AYPEQPATSNAGYGY--Q 705
PN YP GG Q P +P G G Y N Q YP ++ GY
Sbjct: 273 GYPNQYPGGGGYSNQNPGRSGYSPGGYPGAGSYPVRNAGQPGVYPGAHPSAGGGYPNWNP 332
Query: 706 GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTV 765
Q TG ++Q Y+ SA +S +G + AAG G
Sbjct: 333 NNQILSPRYGGSFGGGGFGTGGSPFSQSVKNM-GYNPSA-KSKGFG-KKAVVAAGVGAMA 389
Query: 766 SPQPGY 771
GY
Sbjct: 390 GMAIGY 395
Score = 92 (37.4 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 35/93 (37%), Positives = 41/93 (44%)
Query: 364 KEVLSQTVR---PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG---P- 416
K +S+TV P S G Q PR P+ P G GS+P P YP RG P
Sbjct: 26 KGTVSETVPKKPPEKTSQGTKTQPNYPRQPSNP---GA-GSNPGYPNQ-QYPGRGGSSPS 80
Query: 417 -YPSQNPHYPHLPYGNYPPQQMAPRSNYGGPPN 448
YP+QNP P G P S+ GG PN
Sbjct: 81 GYPNQNPGAGSYPAGGSYPYPGRGGSSPGGYPN 113
Score = 84 (34.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 60/250 (24%), Positives = 78/250 (31%)
Query: 536 PVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXX 595
P Q+P G + Y G + + G P G P Q SY
Sbjct: 186 PNQNPGAGSYPAGGSYPSAGGNPNQYPGRGGSNPGGYPNQNPGAGSYPAGGSYPSAGGNP 245
Query: 596 YQSQVPSAQSYGPNVPHQQQYP--YATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQ 653
Q S G N P+Q YA G Q YP G + + + S GYP
Sbjct: 246 NQYPGRGGSSPGGN-PNQNPGAGTYAGGGYPNQ-YPG-GGGYSNQNPGRSGYSPGGYPGA 302
Query: 654 AGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTN---TQQAYPEQPATSNAGYGYQGTQDX 710
V N QPG Y P+AG G Y N Q + S G G+ GT
Sbjct: 303 GSYPVRNAGQPG-----VYPGAHPSAG-GGYPNWNPNNQILSPRYGGSFGGGGF-GTGGS 355
Query: 711 XXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPG 770
G+ + A A + YG+ G + SPQ
Sbjct: 356 PFSQSVKNMGYNPSAKSKGFGKKAVVAAGVGAMAGMAIGYGI--GNFQRPNFQFRSPQE- 412
Query: 771 YPQYDSTQMY 780
+Y + MY
Sbjct: 413 -ERYYNNHMY 421
Score = 64 (27.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/77 (35%), Positives = 33/77 (42%)
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQP-MAYDYPQRG---P--YPSQNPHYPHLPYGN 431
GG + Y P G + GS+PS YP RG P YP+QNP G+
Sbjct: 104 GGSSPGGY-PNQNPGAGSYPSGGSYPSAGGNPNQYPGRGGYNPGGYPNQNPGA-----GS 157
Query: 432 YPPQQMAPRSNYGGPPN 448
YP P + GG PN
Sbjct: 158 YPAGGSYPSA--GGNPN 172
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 21/54 (38%), Positives = 26/54 (48%)
Query: 377 SGG-FNQQAYRPRVPTGPPQWGPRGSHPSQ-PMAYDYPQRGPYPSQ--NPH-YP 425
SGG + P G + P G +P+Q P A YP G YPS NP+ YP
Sbjct: 123 SGGSYPSAGGNPNQYPGRGGYNP-GGYPNQNPGAGSYPAGGSYPSAGGNPNQYP 175
>ASPGD|ASPL0000051147 [details] [associations]
symbol:rfeF species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005576
"extracellular region" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002035
PROSITE:PS50234 SMART:SM00327 EMBL:BN001307
EnsemblFungi:CADANIAT00008680 OMA:DCTSNFE Uniprot:C8VLE0
Length = 524
Score = 125 (49.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 48/146 (32%), Positives = 55/146 (37%)
Query: 554 GGLQSGYH-QHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPH 612
G + S Y + + G P G P G P Y Q Y P P
Sbjct: 382 GSIDSSYDTKDERGSGPSGAPP-GPPPGQYGGYGQSGPGYGSSAPYNPGQQQPYSPAYPP 440
Query: 613 QQQYP--YATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAP 670
Q P YA P Q Y Y S P P Y P + G Q G A P YP P Q +
Sbjct: 441 HSQAPGGYAQP-PPQGQYGGY-SQPGP-GYGSPAPYSSGQQQGYGSA-P-YP-PSSQASG 494
Query: 671 SYGQVAPTAGYGQYTNTQQAYP-EQP 695
SYGQ YGQ +Q YP +QP
Sbjct: 495 SYGQQQ----YGQRPGSQPGYPGQQP 516
Score = 104 (41.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 41/130 (31%), Positives = 44/130 (33%)
Query: 536 PVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXX 595
P YGG+ S P Y + Q Y P Y P P Y
Sbjct: 405 PPPGQYGGYGQSGPGYGSSAPYNPGQQQPYS-PAY--PPHSQAPGGYAQPPPQGQYGG-- 459
Query: 596 YQSQVPSAQSYGPNVPHQQQ-YPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA 654
Y P S P QQQ Y A P+ Q SYG Y Q P S PGYP
Sbjct: 460 YSQPGPGYGSPAPYSSGQQQGYGSAPYPPSSQASGSYGQ----QQYGQRPGSQPGYP--- 512
Query: 655 GQAVPNYPQP 664
GQ P QP
Sbjct: 513 GQQPPYGQQP 522
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 48/146 (32%), Positives = 55/146 (37%)
Query: 601 PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPN 660
PS GP P Q Y SGP YGS+ AP + Q +P YP + QA
Sbjct: 398 PSGAPPGP--PPGQYGGYGQSGP------GYGSS-APYNPGQQQPYSPAYPPHS-QAPGG 447
Query: 661 YPQPGGQ-QAPSYGQVAPTAGYGQ---YTN-TQQAYPEQP-ATSNAGYGYQGTQDXXXXX 714
Y QP Q Q Y Q P GYG Y++ QQ Y P S+ G G Q
Sbjct: 448 YAQPPPQGQYGGYSQPGP--GYGSPAPYSSGQQQGYGSAPYPPSSQASGSYGQQQYGQRP 505
Query: 715 XXXXXXXXXXTGQPGYAQPAATQPSY 740
G PG P QP Y
Sbjct: 506 GSQ-------PGYPGQQPPYGQQPRY 524
Score = 89 (36.4 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 29/80 (36%), Positives = 32/80 (40%)
Query: 378 GGFNQQAYRPRVPTGP--------PQWGPRGSHPSQP-MAYDYPQRGPYPSQNPHYPHLP 428
GG +Y PTG PQ P+ P Q AY YP QN YP P
Sbjct: 22 GGAPPTSYTGGPPTGAGSQAGGYQPQQAPQQQQPPQQYQAYPGGSASGYPPQNAPYPPGP 81
Query: 429 YGNYPPQQMAPRSNYGGPPN 448
G PP AP YG PP+
Sbjct: 82 PG--PPHAQAPGGQYG-PPS 98
Score = 82 (33.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 38/122 (31%), Positives = 43/122 (35%)
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQ---YT-NTQQAY-PEQPATSNAGYGYQGTQDXXXX 713
P P PG Q YGQ P GYG Y QQ Y P P S A GY
Sbjct: 402 PPGPPPG--QYGGYGQSGP--GYGSSAPYNPGQQQPYSPAYPPHSQAPGGYAQPPPQGQY 457
Query: 714 XXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAG---YGKTVSPQPG 770
G PGY PA Q + +Q + + G YG+ QPG
Sbjct: 458 GGYSQ------PG-PGYGSPAPYSSGQQQGYGSAPYPPSSQASGSYGQQQYGQRPGSQPG 510
Query: 771 YP 772
YP
Sbjct: 511 YP 512
Score = 74 (31.1 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 25/70 (35%), Positives = 30/70 (42%)
Query: 377 SGGFN-QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
+GG+ QQA + + P Q P GS P PQ PYP P P P+ P
Sbjct: 41 AGGYQPQQAPQQQQPPQQYQAYPGGSASGYP-----PQNAPYP---PGPPGPPHAQAPGG 92
Query: 436 QMAPRSNYGG 445
Q P S GG
Sbjct: 93 QYGPPSGAGG 102
Score = 65 (27.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 24/72 (33%), Positives = 26/72 (36%)
Query: 377 SGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQ 436
SGG A P TG P G GS PQ+ P Q YP YPPQ
Sbjct: 17 SGGVYGGA-PPTSYTGGPPTGA-GSQAGGYQPQQAPQQQQPPQQYQAYPGGSASGYPPQN 74
Query: 437 MAPRSNYGGPPN 448
GPP+
Sbjct: 75 APYPPGPPGPPH 86
>UNIPROTKB|Q0VCU0 [details] [associations]
symbol:PCBP4 "Poly(rC)-binding protein 4" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0003677 GO:GO:0003723
GO:GO:0030529 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
HOGENOM:HOG000182823 HOVERGEN:HBG053520 KO:K13162 EMBL:BC120009
IPI:IPI00707807 RefSeq:NP_001068751.1 UniGene:Bt.7587
ProteinModelPortal:Q0VCU0 SMR:Q0VCU0 PRIDE:Q0VCU0
Ensembl:ENSBTAT00000024779 GeneID:506889 KEGG:bta:506889 CTD:57060
InParanoid:Q0VCU0 OMA:MSSSDAG OrthoDB:EOG48D0VR NextBio:20867786
Uniprot:Q0VCU0
Length = 403
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ S A+I I+ + + R I G+ +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE-----RITTITGSTAA 71
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ A +I A + D +P A G S + + +P + G +IG+ G I
Sbjct: 72 VFHAVSMI-AFKLDEDLCAAP---ANG---GNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
K ++ +GA++Q+ LP S ER V V+G
Sbjct: 125 KEIRETTGAQVQVAGDLLPN---STERAVTVSG 154
Score = 116 (45.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 45/118 (38%), Positives = 58/118 (49%)
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
SPS+V GL S E VPN+ +G +IGR G I ++ SGA I++ Q
Sbjct: 228 SPSMVP-GL---DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ--A 281
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR-VPTGPP 394
EG G ER V +TG I +AQ +I L +T + ST SGG A P PP
Sbjct: 282 EGAG--ERHVTITGSPVSIALAQYLITACL-ETAK-ST-SGGTPGSAPTDLPAPFSPP 334
Score = 95 (38.5 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P ++ G LIGKAG I+ ++ +GA++Q+ D P++ R V + G I
Sbjct: 105 RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA--GDLLPNSTERAVTVSGVPDAIILC 162
Query: 263 EKLINAVIAEADAGGS 278
+ I AVI E+ G+
Sbjct: 163 VRQICAVILESPPKGA 178
>UNIPROTKB|E2RG64 [details] [associations]
symbol:PCBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311 KO:K13162
CTD:57060 OMA:MSSSDAG EMBL:AAEX03012201 RefSeq:XP_849987.1
Ensembl:ENSCAFT00000015946 GeneID:476603 KEGG:cfa:476603
NextBio:20852230 Uniprot:E2RG64
Length = 403
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ S A+I I+ + + R I G+ +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE-----RITTITGSTAA 71
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ A +I A + D +P A G S + + +P + G +IG+ G I
Sbjct: 72 VFHAVSMI-AFKLDEDLCAAP---ANG---GNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
K ++ +GA++Q+ LP S ER V V+G
Sbjct: 125 KEIRETTGAQVQVAGDLLPN---STERAVTVSG 154
Score = 116 (45.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 47/119 (39%), Positives = 60/119 (50%)
Query: 278 SPSLVARGLAT-AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHL 336
SPS+V GL AQ S E VPN+ +G +IGR G I ++ SGA I++ Q
Sbjct: 228 SPSMVP-GLDPGAQTSSQ----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-- 280
Query: 337 PEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR-VPTGPP 394
EG G ER V +TG I +AQ +I L +T + ST SGG A P PP
Sbjct: 281 AEGAG--ERHVTITGSPVSIALAQYLITACL-ETAK-ST-SGGTPGSAPTDLPAPFSPP 334
Score = 95 (38.5 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P ++ G LIGKAG I+ ++ +GA++Q+ D P++ R V + G I
Sbjct: 105 RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA--GDLLPNSTERAVTVSGVPDAIILC 162
Query: 263 EKLINAVIAEADAGGS 278
+ I AVI E+ G+
Sbjct: 163 VRQICAVILESPPKGA 178
>RGD|1307910 [details] [associations]
symbol:Pcbp4 "poly(rC) binding protein 4" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA;ISO] [GO:0006977
"DNA damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=ISO] [GO:0007050 "cell
cycle arrest" evidence=ISO] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307910 GO:GO:0003723
GeneTree:ENSGT00550000074311 KO:K13162 CTD:57060 OMA:MSSSDAG
OrthoDB:EOG48D0VR IPI:IPI00366708 RefSeq:NP_001178812.1
UniGene:Rn.40405 Ensembl:ENSRNOT00000017139 GeneID:363133
KEGG:rno:363133 UCSC:RGD:1307910 NextBio:682555 Uniprot:D3ZCS3
Length = 403
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ S A+I I+ + + R I G+ +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE-----RITTITGSTAA 71
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ A +I A + D +P A G S + + +P + G +IG+ G I
Sbjct: 72 VFHAVSMI-AFKLDEDLCAAP---ANG---GSVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
K ++ +GA++Q+ LP S ER V V+G
Sbjct: 125 KEIRETTGAQVQVAGDLLPN---STERAVTVSG 154
Score = 116 (45.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 46/119 (38%), Positives = 60/119 (50%)
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
SPS+V GL S E VPN+ +G +IGR G I ++ SGA I++ Q
Sbjct: 228 SPSVVP-GL---DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ--A 281
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF--NQQAYRPRVPTGPP 394
EG G ER V +TG I +AQ +I L +T + ST SGG + A P P PP
Sbjct: 282 EGAG--ERHVTITGSPVSIALAQYLITACL-ETAK-ST-SGGTPGSAPADLP-TPFSPP 334
Score = 95 (38.5 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P ++ G LIGKAG I+ ++ +GA++Q+ D P++ R V + G I
Sbjct: 105 RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA--GDLLPNSTERAVTVSGVPDAIILC 162
Query: 263 EKLINAVIAEADAGGS 278
+ I AVI E+ G+
Sbjct: 163 VRQICAVILESPPKGA 178
>UNIPROTKB|B4DR34 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] GO:GO:0000226 GO:GO:0042493 GO:GO:0007243
GO:GO:0000902 GO:GO:0048013 GO:GO:0005881 HOVERGEN:HBG003892
InterPro:IPR007726 PANTHER:PTHR23107 UniGene:Hs.129261
EMBL:AC091021 HGNC:HGNC:11340 ChiTaRS:SS18 EMBL:AK299082
IPI:IPI01015658 STRING:B4DR34 Ensembl:ENST00000539849
Uniprot:B4DR34
Length = 336
Score = 147 (56.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 58/169 (34%), Positives = 66/169 (39%)
Query: 529 GYDDNHAPVQHPYGGHSN----SQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
G +D + Q+ +GG +Q Y G GY Q Y + Y P + + Y
Sbjct: 184 GQEDYYGD-QYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG 242
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPP 644
YQ P Q Y P P QQQYP G QQ YP P S P
Sbjct: 243 GNSQYGQQQDAYQGPPPQ-QGY-P--PQQQQYP----G--QQGYPGQQQGYGP-SQGGPG 291
Query: 645 ASAPGYPQQAGQAVPNY-P-QPGGQQAPSYGQVAPTAGY--GQYTNTQQ 689
P YPQ GQ Y P QPG Q P Q P GY GQY N QQ
Sbjct: 292 PQYPNYPQGQGQQYGGYRPTQPGPPQPP---QQRPY-GYDQGQYGNYQQ 336
Score = 112 (44.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 56/180 (31%), Positives = 61/180 (33%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQ 599
PY P G Q Y+ QY G P +G Q Y Y Q
Sbjct: 170 PYRPPQQGPPQQYSG--QEDYYGDQYSHGGQG-PPEGMNQQYYPDGHNDYGYQQPSYPEQ 226
Query: 600 V---P---SAQSY--GPNVPHQQQYPYATSGPTQQTYPSYGSA-PAPDSYNQPPASAPGY 650
P S+Q Y G N + QQ P QQ YP P Y P GY
Sbjct: 227 GYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGY---PGQQQGY 283
Query: 651 -PQQAGQA--VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY-QG 706
P Q G PNYPQ GQQ YG Y TQ P+ P YGY QG
Sbjct: 284 GPSQGGPGPQYPNYPQGQGQQ------------YGGYRPTQPGPPQPP--QQRPYGYDQG 329
Score = 110 (43.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 73/252 (28%), Positives = 88/252 (34%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYG-KPPYGM-PAQGTQ--PQSYXXXXXXXXXXXXXYQSQV 600
S S PV +Q + G YG +P M P QG Q YQ Q
Sbjct: 88 SQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQ 147
Query: 601 PS----AQ-SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY-NQPPASAPGYPQQA 654
P Q + G ++ Q+Q P P QQ P S D Y +Q G P+
Sbjct: 148 PPMGMMGQVNQGNHMMGQRQIP--PYRPPQQGPPQQYSGQE-DYYGDQYSHGGQGPPEGM 204
Query: 655 GQAV-PNYPQPGGQQAPSYGQVAPTAGYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
Q P+ G Q PSY P GY + Y ++ Q Y E N+ YG Q QD
Sbjct: 205 NQQYYPDGHNDYGYQQPSY----PEQGYDRPYEDSSQHYYEG---GNSQYGQQ--QDAYQ 255
Query: 713 X---XXXXXXXXXXXTGQPGY-AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQ 768
GQ GY Q PS Q Y QG GY T Q
Sbjct: 256 GPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPT---Q 312
Query: 769 PGYPQYDSTQMY 780
PG PQ + Y
Sbjct: 313 PGPPQPPQQRPY 324
Score = 101 (40.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 49/142 (34%), Positives = 53/142 (37%)
Query: 528 HGYDDNHAPVQ---HPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
+GY P Q PY +SQ Y G Q G Q Y PP P QG PQ
Sbjct: 216 YGYQQPSYPEQGYDRPY--EDSSQHYYEGGNSQYGQQQDAYQGPP---PQQGYPPQQQQY 270
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQ-QQYPYATSGPTQQTYPSYG-SAPAPDSYNQ 642
Y Q Q YGP+ QYP G QQ Y Y + P P Q
Sbjct: 271 PGQQG------YPGQ---QQGYGPSQGGPGPQYPNYPQGQGQQ-YGGYRPTQPGPP---Q 317
Query: 643 PPASAP-GYPQQAGQAVPNYPQ 663
PP P GY Q GQ NY Q
Sbjct: 318 PPQQRPYGYDQ--GQ-YGNYQQ 336
Score = 59 (25.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 21/73 (28%), Positives = 28/73 (38%)
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAY--DYPQRGPYPSQNPHYPHLPYGN--YPP 434
G + R P PPQ GP + Q Y Y G P + + + P G+ Y
Sbjct: 159 GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY 218
Query: 435 QQMA-PRSNYGGP 446
QQ + P Y P
Sbjct: 219 QQPSYPEQGYDRP 231
Score = 58 (25.5 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 19/66 (28%), Positives = 24/66 (36%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNY 443
+ P GP Q S + P + + G Y P +P N Q P NY
Sbjct: 50 HMPMQGPGPNQLNMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 108
Query: 444 GGPPNM 449
G PNM
Sbjct: 109 GPRPNM 114
Score = 58 (25.5 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 34/141 (24%), Positives = 55/141 (39%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 27 MVG-GGPPAPHMQNQMNGQMPG-PNHMPMQGPGPNQ--LNMTNSSMNMPSSSHGSMGGYN 82
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGS---HPSQ-PMAYDYPQRGPYPSQNPH 423
+V PS+ S NQ P G +GPR + P+Q PM + P Y
Sbjct: 83 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGG 139
Query: 424 YPHLPYGNYPPQQMAPRSNYG 444
H G PP M + N G
Sbjct: 140 GQHYQ-GQQPPMGMMGQVNQG 159
Score = 46 (21.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/55 (29%), Positives = 21/55 (38%)
Query: 394 PQWGPR---GSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG 445
PQ G + G P M Q Q P+ P PPQQ + + +Y G
Sbjct: 136 PQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYG 190
>TAIR|locus:2156141 [details] [associations]
symbol:AT5G61910 "AT5G61910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR UniGene:At.20314 InterPro:IPR013989
PROSITE:PS51222 Pfam:PF10539 SMART:SM00767 EMBL:AY064976
EMBL:AK228835 IPI:IPI00516510 RefSeq:NP_200997.2 RefSeq:NP_974978.1
PRIDE:Q8VZG6 EnsemblPlants:AT5G61910.1 EnsemblPlants:AT5G61910.2
GeneID:836312 KEGG:ath:AT5G61910 TAIR:At5g61910 eggNOG:NOG263803
HOGENOM:HOG000131625 ProtClustDB:CLSN2690258 Genevestigator:Q8VZG6
Uniprot:Q8VZG6
Length = 738
Score = 167 (63.8 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 67/215 (31%), Positives = 83/215 (38%)
Query: 558 SGYHQHQYGK---PPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSY-GPNVPHQ 613
+GY +G+ PP G QPQS +S QSY G + Q
Sbjct: 437 AGYPTPAHGEASQPPAGAIGYTHQPQSVAGNYSTHSQPGNVEES----TQSYAGTDSYSQ 492
Query: 614 QQYPYATSGPTQQTYPS-YGSAPAPDSYNQPPA-SAPGYPQQAGQAVPNYPQPGGQQAPS 671
QQY YA GPT Q + Y P Y+Q P +A GY QQ A Y Q A
Sbjct: 493 QQY-YAAMGPTTQLHAGGYIQKPHEIGYSQQPHDAATGYSQQPHDAATGYSQQPHDAATG 551
Query: 672 YGQV--APTAGYGQYTNTQQA-YPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQP 728
Y Q A + GY Q T Y +QP + AGY Q QP
Sbjct: 552 YSQQPHAASTGYSQQTYAAATGYTQQPHAAAAGYTQQPHAAATGYSQQPHAAATAHAQQP 611
Query: 729 GYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGK 763
YA AAT + Q + +T Y + AA GY +
Sbjct: 612 -YA--AATAHA-QQLHAVATGYALQLHAAATGYAQ 642
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 70/254 (27%), Positives = 84/254 (33%)
Query: 529 GYDDNHAPVQHPYGGHSN----SQPVYSQGGLQSGYHQHQYGK---PPYGMPAQGTQPQS 581
GY V Y HS + S G S Y Q QY P + A G +
Sbjct: 456 GYTHQPQSVAGNYSTHSQPGNVEESTQSYAGTDS-YSQQQYYAAMGPTTQLHAGGYIQKP 514
Query: 582 YXXXXXXXXXXXXXYQSQVP--SAQSYGPNVPHQ-----QQYPYATS-GPTQQTYPSYGS 633
+ SQ P +A Y PH Q P+A S G +QQTY
Sbjct: 515 HEIGYSQQPHDAATGYSQQPHDAATGYSQQ-PHDAATGYSQQPHAASTGYSQQTY----- 568
Query: 634 APAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQ---VAPTAGYGQYTNTQQA 690
A A QP A+A GY QQ A Y Q A ++ Q A TA Q
Sbjct: 569 AAATGYTQQPHAAAAGYTQQPHAAATGYSQQPHAAATAHAQQPYAAATAHAQQLHAVATG 628
Query: 691 YPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAY 750
Y Q + GY Q T QP +AQ P Y A +
Sbjct: 629 YALQLHAAATGYAQQPHAAATGYALQPHAQAVEYTMQP-HAQAVGYMPQYHAHAVVYSQQ 687
Query: 751 GVAQGTAAAGYGKT 764
GV QG+ G T
Sbjct: 688 GVTQGSVPRAPGTT 701
>MGI|MGI:1890471 [details] [associations]
symbol:Pcbp4 "poly(rC) binding protein 4" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=ISO] [GO:0007050
"cell cycle arrest" evidence=ISO] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:1890471 GO:GO:0005737 GO:GO:0003677
GO:GO:0003723 GO:GO:0030529 GeneTree:ENSGT00550000074311
eggNOG:NOG315872 HOGENOM:HOG000182823 HOVERGEN:HBG053520 KO:K13162
CTD:57060 OrthoDB:EOG48D0VR EMBL:AF176328 EMBL:BC010694
IPI:IPI00118718 RefSeq:NP_067542.3 UniGene:Mm.286394
ProteinModelPortal:P57724 SMR:P57724 STRING:P57724
PhosphoSite:P57724 PaxDb:P57724 PRIDE:P57724
Ensembl:ENSMUST00000024260 GeneID:59092 KEGG:mmu:59092
InParanoid:P57724 NextBio:314742 Bgee:P57724 CleanEx:MM_PCBP4
Genevestigator:P57724 GermOnline:ENSMUSG00000023495 Uniprot:P57724
Length = 403
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ S A+I I+ + + R I G+ +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE-----RITTITGSTAA 71
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ A +I A + D +P A G S + + +P + G +IG+ G I
Sbjct: 72 VFHAVSMI-AFKLDEDLCAAP---ANG---GSVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
K ++ +GA++Q+ LP S ER V V+G
Sbjct: 125 KEIRETTGAQVQVAGDLLPN---STERAVTVSG 154
Score = 114 (45.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
SPS+V + Q S E VPN+ +G +IGR G I ++ SGA I++ Q
Sbjct: 228 SPSVVPGMDPSTQTSSQ----EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ--A 281
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF--NQQAYRPRVPTGPP 394
EG G ER V +TG I +AQ +I L +T + ST SGG + A P P PP
Sbjct: 282 EGAG--ERHVTITGSPVSIALAQYLITACL-ETAK-ST-SGGTPGSAPADLP-TPFSPP 334
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P ++ G LIGKAG I+ ++ +GA++Q+ D P++ R V + G I
Sbjct: 105 RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA--GDLLPNSTERAVTVSGVPDAIILC 162
Query: 263 EKLINAVIAEADAGGS 278
+ I AVI E+ G+
Sbjct: 163 VRQICAVILESPPKGA 178
>MGI|MGI:107708 [details] [associations]
symbol:Ss18 "synovial sarcoma translocation, Chromosome 18"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IDA] [GO:0000902 "cell morphogenesis"
evidence=IGI;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISO] [GO:0042493 "response to drug"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IDA] MGI:MGI:107708
GO:GO:0005634 GO:GO:0000226 GO:GO:0042493 GO:GO:0045944
GO:GO:0007243 GO:GO:0006351 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
HOGENOM:HOG000048717 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 CTD:6760 eggNOG:NOG274014 KO:K15623
OrthoDB:EOG4RFKTH EMBL:X93357 EMBL:AY055726 EMBL:AK166053
IPI:IPI00123532 RefSeq:NP_033306.2 UniGene:Mm.31761
ProteinModelPortal:Q62280 IntAct:Q62280 STRING:Q62280
PhosphoSite:Q62280 PRIDE:Q62280 Ensembl:ENSMUST00000040924
GeneID:268996 KEGG:mmu:268996 InParanoid:Q3TM96 OMA:IQCIMDS
NextBio:392632 Bgee:Q62280 CleanEx:MM_SS18 Genevestigator:Q62280
GermOnline:ENSMUSG00000037013 Uniprot:Q62280
Length = 418
Score = 148 (57.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 59/169 (34%), Positives = 67/169 (39%)
Query: 529 GYDDNHAPVQHPYGGHSN----SQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
G +D + Q+ +GG +Q Y G GY Q Y + Y P + + Y
Sbjct: 266 GQEDYYGD-QYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG 324
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPP 644
YQ P Q Y P P QQQYP P QQ SYG P S P
Sbjct: 325 GNSQYGQQQDAYQGPPPQ-QGY-P--PQQQQYPGQQGYPGQQQ--SYG----P-SQGGPG 373
Query: 645 ASAPGYPQQAGQAVPNY-P-QPGGQQAPSYGQVAPTAGY--GQYTNTQQ 689
P YPQ GQ Y P QPG Q P Q P GY GQY N QQ
Sbjct: 374 PQYPNYPQGQGQQYGGYRPTQPGPPQPP---QQRPY-GYDQGQYGNYQQ 418
Score = 111 (44.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 58/186 (31%), Positives = 65/186 (34%)
Query: 540 PYGG--HSNSQ--PVYSQGGLQSGYHQH-QYGKPPYGMPAQGTQPQSYXXXXXXXXXXXX 594
P GG H Q P+ G + G H Q PPY P QG PQ Y
Sbjct: 218 PPGGAQHYQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQGP-PQQYSGQEDY------ 270
Query: 595 XYQSQVPSAQSYGPNVPHQQQYP--YATSGPTQQTYPSYG-SAPAPDS---YNQPPASAP 648
Y Q P +QQ YP + G Q +YP G P DS Y + S
Sbjct: 271 -YGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQY 329
Query: 649 GYPQQAGQAVP---NYPQPGGQQAPSY-GQVAPTAGYG-QYTNTQQAYPEQPATSNAGYG 703
G Q A Q P YP P QQ P G YG YP P YG
Sbjct: 330 GQQQDAYQGPPPQQGYP-PQQQQYPGQQGYPGQQQSYGPSQGGPGPQYPNYPQGQGQQYG 388
Query: 704 -YQGTQ 708
Y+ TQ
Sbjct: 389 GYRPTQ 394
Score = 108 (43.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 56/181 (30%), Positives = 59/181 (32%)
Query: 536 PVQHP---YGGHSNSQ-PVYSQGGL--QSGYHQHQY--GKPPYGMPAQGTQPQSYXX-XX 586
P Q P Y G + YS GG G +Q Y G YG Q Y
Sbjct: 256 PQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYE 315
Query: 587 XXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPAS 646
SQ Q P QQ YP P QQ YP P P
Sbjct: 316 DSSQHYYEGGNSQYGQQQDAYQGPPPQQGYP-----PQQQQYPGQQGYPGQQQSYGPSQG 370
Query: 647 APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY-Q 705
PG PQ PNYPQ GQQ YG Y TQ P+ P YGY Q
Sbjct: 371 GPG-PQY-----PNYPQGQGQQ------------YGGYRPTQPGPPQPP--QQRPYGYDQ 410
Query: 706 G 706
G
Sbjct: 411 G 411
Score = 107 (42.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 72/252 (28%), Positives = 88/252 (34%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYG-KPPYGM-PAQGTQ--PQSYXXXXXXXXXXXXXYQSQ- 599
S S PV +Q + G YG +P M P QG Q YQ Q
Sbjct: 170 SQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGAQHYQGQQ 229
Query: 600 VPSAQ----SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY-NQPPASAPGYPQQA 654
P + G ++ Q+Q P P QQ P S D Y +Q G P+
Sbjct: 230 APMGLMGQVNQGSHMMGQRQMP--PYRPPQQGPPQQYSGQE-DYYGDQYSHGGQGPPEGM 286
Query: 655 GQAV-PNYPQPGGQQAPSYGQVAPTAGYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
Q P+ G Q PSY P GY + Y ++ Q Y E N+ YG Q QD
Sbjct: 287 NQQYYPDGHNDYGYQQPSY----PEQGYDRPYEDSSQHYYEG---GNSQYGQQ--QDAYQ 337
Query: 713 X---XXXXXXXXXXXTGQPGY-AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQ 768
GQ GY Q + PS Q Y QG GY T Q
Sbjct: 338 GPPPQQGYPPQQQQYPGQQGYPGQQQSYGPSQGGPGPQYPNYPQGQGQQYGGYRPT---Q 394
Query: 769 PGYPQYDSTQMY 780
PG PQ + Y
Sbjct: 395 PGPPQPPQQRPY 406
Score = 105 (42.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 50/142 (35%), Positives = 54/142 (38%)
Query: 528 HGYDDNHAPVQ---HPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
+GY P Q PY +SQ Y G Q G Q Y PP P QG PQ
Sbjct: 298 YGYQQPSYPEQGYDRPY--EDSSQHYYEGGNSQYGQQQDAYQGPP---PQQGYPPQQQQY 352
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQ-QQYPYATSGPTQQTYPSYG-SAPAPDSYNQ 642
Y Q QSYGP+ QYP G QQ Y Y + P P Q
Sbjct: 353 PGQQG------YPGQ---QQSYGPSQGGPGPQYPNYPQGQGQQ-YGGYRPTQPGPP---Q 399
Query: 643 PPASAP-GYPQQAGQAVPNYPQ 663
PP P GY Q GQ NY Q
Sbjct: 400 PPQQRPYGYDQ--GQ-YGNYQQ 418
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/83 (30%), Positives = 33/83 (39%)
Query: 373 PSTLSGGFNQQAY----RPRVPTGPPQWGPRGSHPSQPMAY--DYPQRGPYPSQNPHYPH 426
P L G NQ ++ R P PPQ GP + Q Y Y G P + + +
Sbjct: 231 PMGLMGQVNQGSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQY 290
Query: 427 LPYGN--YPPQQMA-PRSNYGGP 446
P G+ Y QQ + P Y P
Sbjct: 291 YPDGHNDYGYQQPSYPEQGYDRP 313
Score = 59 (25.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/66 (28%), Positives = 24/66 (36%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNY 443
+ P GP Q S + P + + G Y P +P N Q P NY
Sbjct: 132 HMPMQGPGPSQLSMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 190
Query: 444 GGPPNM 449
G PNM
Sbjct: 191 GPRPNM 196
Score = 54 (24.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 33/127 (25%), Positives = 52/127 (40%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 109 MVG-GGPPAPHMQNQMNGQMPG-PNHMPMQGPGPSQ--LSMTNSSMNMPSSSHGSMGGYN 164
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL 427
+V PS+ S NQ P G +GPR P+ M P +GP Q P P
Sbjct: 165 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPR---PNMNMQ---PNQGPMMHQQP--PSQ 213
Query: 428 PYGNYPP 434
Y N PP
Sbjct: 214 QY-NMPP 219
>UNIPROTKB|H3BRU6 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HGNC:HGNC:8648 ChiTaRS:PCBP2 Ensembl:ENST00000562264 Uniprot:H3BRU6
Length = 301
Score = 141 (54.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 52/184 (28%), Positives = 92/184 (50%)
Query: 210 KVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAV 269
+VG +IGK G++++ ++ SGA+I I+ + + R + + G + I KA +I
Sbjct: 5 EVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNAIFKAFAMI--- 56
Query: 270 IAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARI 329
I + + S S+ +TA AS + + VP + G +IG+GG IK ++ +GA++
Sbjct: 57 IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 112
Query: 330 QLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRV 389
Q+ LP S ER + + G + I + I V+ +T+ S G YRP+
Sbjct: 113 QVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGV--TIPYRPKP 167
Query: 390 PTGP 393
+ P
Sbjct: 168 SSSP 171
Score = 114 (45.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
S S +G AS E+ +PN+ +G IIGR G I ++ SGA+I++ P
Sbjct: 206 SSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN---P 262
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+GS +R V +TG I +AQ +I LS
Sbjct: 263 V-EGSTDRQVTITGSAASISLAQYLINVRLS 292
Score = 90 (36.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP ++ G LIGK G I+ ++ ++GA++Q+ D P++ R + I G +I +
Sbjct: 82 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIPQSIIEC 139
Query: 263 EKLINAVIAEADAGGSP 279
K I V+ E + P
Sbjct: 140 VKQICVVMLETLSQSPP 156
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQ 562
PY +S PV GG + HQ
Sbjct: 162 PYRPKPSSSPVIFAGGQLTKLHQ 184
>UNIPROTKB|G8JLA5 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 ProteinModelPortal:G8JLA5 SMR:G8JLA5
Ensembl:ENST00000347476 Bgee:G8JLA5 Uniprot:G8JLA5
Length = 109
Score = 140 (54.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
+QV+I VPN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q
Sbjct: 26 KQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQ 83
Query: 356 IEIAQEMIKEVLSQ 369
A E+I + + +
Sbjct: 84 NRKAVELIIQKIQE 97
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G T++ + SGA +Q+++ D + R V + G KA
Sbjct: 29 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKA 87
Query: 263 EKLINAVIAEADAGGS 278
+LI I E GS
Sbjct: 88 VELIIQKIQEDPQSGS 103
>UNIPROTKB|B4DLD3 [details] [associations]
symbol:SS18 "cDNA FLJ58120, highly similar to SSXT protein"
species:9606 "Homo sapiens" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0000902 "cell morphogenesis"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007243 "intracellular protein kinase cascade" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0007243 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 UniGene:Hs.129261 EMBL:AC091021
HGNC:HGNC:11340 ChiTaRS:SS18 EMBL:AK296949 IPI:IPI01011245
STRING:B4DLD3 Ensembl:ENST00000542420 Uniprot:B4DLD3
Length = 395
Score = 147 (56.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 58/169 (34%), Positives = 66/169 (39%)
Query: 529 GYDDNHAPVQHPYGGHSN----SQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
G +D + Q+ +GG +Q Y G GY Q Y + Y P + + Y
Sbjct: 243 GQEDYYGD-QYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG 301
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPP 644
YQ P Q Y P P QQQYP G QQ YP P S P
Sbjct: 302 GNSQYGQQQDAYQGPPPQ-QGY-P--PQQQQYP----G--QQGYPGQQQGYGP-SQGGPG 350
Query: 645 ASAPGYPQQAGQAVPNY-P-QPGGQQAPSYGQVAPTAGY--GQYTNTQQ 689
P YPQ GQ Y P QPG Q P Q P GY GQY N QQ
Sbjct: 351 PQYPNYPQGQGQQYGGYRPTQPGPPQPP---QQRPY-GYDQGQYGNYQQ 395
Score = 112 (44.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 56/180 (31%), Positives = 61/180 (33%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQ 599
PY P G Q Y+ QY G P +G Q Y Y Q
Sbjct: 229 PYRPPQQGPPQQYSG--QEDYYGDQYSHGGQG-PPEGMNQQYYPDGHNDYGYQQPSYPEQ 285
Query: 600 V---P---SAQSY--GPNVPHQQQYPYATSGPTQQTYPSYGSA-PAPDSYNQPPASAPGY 650
P S+Q Y G N + QQ P QQ YP P Y P GY
Sbjct: 286 GYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGY---PGQQQGY 342
Query: 651 -PQQAGQA--VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY-QG 706
P Q G PNYPQ GQQ YG Y TQ P+ P YGY QG
Sbjct: 343 GPSQGGPGPQYPNYPQGQGQQ------------YGGYRPTQPGPPQPP--QQRPYGYDQG 388
Score = 110 (43.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 73/252 (28%), Positives = 88/252 (34%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYG-KPPYGM-PAQGTQ--PQSYXXXXXXXXXXXXXYQSQV 600
S S PV +Q + G YG +P M P QG Q YQ Q
Sbjct: 147 SQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQ 206
Query: 601 PS----AQ-SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY-NQPPASAPGYPQQA 654
P Q + G ++ Q+Q P P QQ P S D Y +Q G P+
Sbjct: 207 PPMGMMGQVNQGNHMMGQRQIP--PYRPPQQGPPQQYSGQE-DYYGDQYSHGGQGPPEGM 263
Query: 655 GQAV-PNYPQPGGQQAPSYGQVAPTAGYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
Q P+ G Q PSY P GY + Y ++ Q Y E N+ YG Q QD
Sbjct: 264 NQQYYPDGHNDYGYQQPSY----PEQGYDRPYEDSSQHYYEG---GNSQYGQQ--QDAYQ 314
Query: 713 X---XXXXXXXXXXXTGQPGY-AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQ 768
GQ GY Q PS Q Y QG GY T Q
Sbjct: 315 GPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPT---Q 371
Query: 769 PGYPQYDSTQMY 780
PG PQ + Y
Sbjct: 372 PGPPQPPQQRPY 383
Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 19/66 (28%), Positives = 24/66 (36%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNY 443
+ P GP Q S + P + + G Y P +P N Q P NY
Sbjct: 109 HMPMQGPGPNQLNMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 167
Query: 444 GGPPNM 449
G PNM
Sbjct: 168 GPRPNM 173
Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 34/141 (24%), Positives = 55/141 (39%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 86 MVG-GGPPAPHMQNQMNGQMPG-PNHMPMQGPGPNQ--LNMTNSSMNMPSSSHGSMGGYN 141
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGS---HPSQ-PMAYDYPQRGPYPSQNPH 423
+V PS+ S NQ P G +GPR + P+Q PM + P Y
Sbjct: 142 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGG 198
Query: 424 YPHLPYGNYPPQQMAPRSNYG 444
H G PP M + N G
Sbjct: 199 GQHYQ-GQQPPMGMMGQVNQG 218
Score = 54 (24.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 22/73 (30%), Positives = 29/73 (39%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSH----PSQPMAYDYPQRG------PYPS-QNPHYPHLPY 429
N Q+ P PT GP G + P P +++ P G P P QN +P
Sbjct: 47 NMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPG 106
Query: 430 GNYPPQQMAPRSN 442
N+ P Q P N
Sbjct: 107 PNHMPMQ-GPGPN 118
Score = 46 (21.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 16/55 (29%), Positives = 21/55 (38%)
Query: 394 PQWGPR---GSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG 445
PQ G + G P M Q Q P+ P PPQQ + + +Y G
Sbjct: 195 PQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYG 249
>ZFIN|ZDB-GENE-030131-1600 [details] [associations]
symbol:ewsr1b "Ewing sarcoma breakpoint region 1b"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IMP] [GO:0007067 "mitosis"
evidence=IMP] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-030131-1600 GO:GO:0007067 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0021954
GeneTree:ENSGT00530000063105 HOGENOM:HOG000038010
HOVERGEN:HBG000970 EMBL:BX664747 EMBL:BC097019 UniGene:Dr.76923
SMR:Q4QRG0 STRING:Q4QRG0 Ensembl:ENSDART00000003998 OMA:PVINIYL
Uniprot:Q4QRG0
Length = 579
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 68/187 (36%), Positives = 81/187 (43%)
Query: 598 SQVPSAQSYGP-NVPHQQQYPY-ATSGPTQQTYPSYGS-APAPDS-YNQPPASAPGYPQQ 653
+Q + QSYG P Q Y A G TQQ Y SY A AP++ Y+Q SA Y QQ
Sbjct: 11 NQAGAQQSYGSYTAPPAQTYGQTAQQGYTQQDYSSYAQPAAAPEATYSQAAPSAGAYAQQ 70
Query: 654 AGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXX 713
Y GQ A + AP A YG T AY QPA S Y G+
Sbjct: 71 ------QYGSTYGQAAAT-AAAAPAA-YG--TPQPGAYT-QPAQSYGASSYTGSTAAPAA 119
Query: 714 XXXXXXXXXXXTGQPGYA----QPAATQP-SYDQSASQSTAYGVAQGTAAAGYGKT--VS 766
T QP Y+ QPAA+ P SY SAS AY + + AGY + +
Sbjct: 120 QASYGSQPGYST-QPAYSGYSQQPAASAPQSY--SASSQPAYNQSAYSQPAGYSQPGYQA 176
Query: 767 PQPGYPQ 773
QPGY Q
Sbjct: 177 QQPGYGQ 183
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 81/253 (32%), Positives = 99/253 (39%)
Query: 548 QPVYSQGGLQSG-YHQHQYGKPPYGM--------PAQ-GT-QPQSYXXXXXXXXXXXXXY 596
+ YSQ +G Y Q QYG YG PA GT QP +Y
Sbjct: 54 EATYSQAAPSAGAYAQQQYGST-YGQAAATAAAAPAAYGTPQPGAYTQPAQSYGASSYTG 112
Query: 597 QSQVPSAQ-SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAG 655
+ P+AQ SYG + Q Y SG +QQ P+ A AP SY+ +S P Y Q A
Sbjct: 113 STAAPAAQASYGSQPGYSTQPAY--SGYSQQ--PA---ASAPQSYSA--SSQPAYNQSAY 163
Query: 656 QAVPNYPQPGGQ-QAPSYGQVAPTAGYGQYTNTQQ-------AYPEQPATSNAG--YGYQ 705
Y QPG Q Q P YGQ +A YGQ QQ AYP Q ++S A YG Q
Sbjct: 164 SQPAGYSQPGYQAQQPGYGQQQQSA-YGQGQPPQQHQQGPPAAYPPQGSSSYAQTQYGQQ 222
Query: 706 GT--QDXXXXXXXXXXXXXXXTGQPGYAQPAATQPS----YDQSASQSTAYGVAQGTAAA 759
D G PG +Q Q YD+ + G G A
Sbjct: 223 SAPQNDYQQNPYNSYSQGGVSGGYPG-SQRGGYQDGGRDGYDRGGPRGRGMGRG-GMGIA 280
Query: 760 GYGKTVSPQPGYP 772
G + +PG P
Sbjct: 281 G-DRGGFNKPGGP 292
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 60/172 (34%), Positives = 69/172 (40%)
Query: 628 YPSYGSAPAPDSYNQ---PPASAPGYPQQAG---QAVPNYPQPGGQQAPSYGQVAPTAG- 680
Y SY A A SY PPA G Q G Q +Y QP +Y Q AP+AG
Sbjct: 7 YSSYNQAGAQQSYGSYTAPPAQTYGQTAQQGYTQQDYSSYAQPAAAPEATYSQAAPSAGA 66
Query: 681 YGQ--YTNTQQAYPEQPATSNAGYGYQGT-QDXXXXXXXXXXXXXXXTGQPGYAQPAATQ 737
Y Q Y +T Y + AT+ A GT Q TG A PAA Q
Sbjct: 67 YAQQQYGST---YGQAAATAAAAPAAYGTPQPGAYTQPAQSYGASSYTGST--AAPAA-Q 120
Query: 738 PSYDQSASQST--AY-GVAQGTAA-AGYGKTVSPQPGYPQ--YDSTQMYAAP 783
SY ST AY G +Q AA A + S QP Y Q Y Y+ P
Sbjct: 121 ASYGSQPGYSTQPAYSGYSQQPAASAPQSYSASSQPAYNQSAYSQPAGYSQP 172
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 68/250 (27%), Positives = 91/250 (36%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGL-QSGYHQHQYG---KP---P---YGM--PAQGTQPQ 580
N A Q YG ++ + P + G Q GY Q Y +P P Y P+ G Q
Sbjct: 11 NQAGAQQSYGSYT-APPAQTYGQTAQQGYTQQDYSSYAQPAAAPEATYSQAAPSAGAYAQ 69
Query: 581 -----SYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAP 635
+Y Y + P A + Y +T+ P Q SYGS P
Sbjct: 70 QQYGSTYGQAAATAAAAPAAYGTPQPGAYTQPAQSYGASSYTGSTAAPAAQA--SYGSQP 127
Query: 636 APDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPT--AGYGQ--YTNTQQAY 691
Y+ PA + GY QQ + P Q P+Y Q A + AGY Q Y Q Y
Sbjct: 128 G---YSTQPAYS-GYSQQPAASAPQSYSASSQ--PAYNQSAYSQPAGYSQPGYQAQQPGY 181
Query: 692 PEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYG 751
+Q ++ G G Q Q Y Q +A Q Y Q+ S Y
Sbjct: 182 GQQQQSAY-GQGQPPQQHQQGPPAAYPPQGSSSYAQTQYGQQSAPQNDYQQNPYNS--Y- 237
Query: 752 VAQGTAAAGY 761
+QG + GY
Sbjct: 238 -SQGGVSGGY 246
>UNIPROTKB|F8VRG9 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 EMBL:AC068889
EMBL:AC023509 HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01022480
ProteinModelPortal:F8VRG9 SMR:F8VRG9 PRIDE:F8VRG9
Ensembl:ENST00000552083 ArrayExpress:F8VRG9 Bgee:F8VRG9
Uniprot:F8VRG9
Length = 323
Score = 112 (44.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 287 ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI 346
A AS E+ +PN+ +G IIGR G I ++ SGA+I++ P +GS +R
Sbjct: 237 AGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN---PV-EGSTDRQ 292
Query: 347 VRVTGDMRQIEIAQEMIKEVLS 368
V +TG I +AQ +I LS
Sbjct: 293 VTITGSAASISLAQYLINVRLS 314
Score = 92 (37.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP ++ G LIGK G I+ ++ ++GA++Q+ D P++ R + I G +I +
Sbjct: 62 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIPQSIIEC 119
Query: 263 EKLINAVIAEADAGG 277
K I V+ E+ G
Sbjct: 120 VKQICVVMLESPPKG 134
Score = 47 (21.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 19/98 (19%), Positives = 42/98 (42%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATR---PVEIIGT 255
T++ ++ + +VG +IGK G++++ ++ + A + P R P G+
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREEDISSSMTNSTAASRPPVTLRLVVPASQCGS 72
Query: 256 LSNID--KAEKLINAVIAEADAGGS--PSLVARGLATA 289
L K +++ + A+ G P+ R + A
Sbjct: 73 LIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 110
>UNIPROTKB|Q15532 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] GO:GO:0005634 GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0006351
EMBL:CH471088 GO:GO:0000902 Orphanet:3273 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 UniGene:Hs.129261 EMBL:X79200
EMBL:S79894 EMBL:X79201 EMBL:AF343880 EMBL:EF445031 EMBL:BC096223
IPI:IPI00452919 IPI:IPI00940186 PIR:S46269 RefSeq:NP_001007560.1
RefSeq:NP_005628.2 ProteinModelPortal:Q15532 IntAct:Q15532
STRING:Q15532 PhosphoSite:Q15532 DMDM:20141795 PaxDb:Q15532
PRIDE:Q15532 DNASU:6760 Ensembl:ENST00000269137
Ensembl:ENST00000415083 GeneID:6760 KEGG:hsa:6760 UCSC:uc002kvm.3
CTD:6760 GeneCards:GC18M023596 HGNC:HGNC:11340 MIM:600192
neXtProt:NX_Q15532 PharmGKB:PA36164 eggNOG:NOG274014
InParanoid:Q15532 KO:K15623 OrthoDB:EOG4RFKTH PhylomeDB:Q15532
ChiTaRS:SS18 GenomeRNAi:6760 NextBio:26388 ArrayExpress:Q15532
Bgee:Q15532 CleanEx:HS_SS18 Genevestigator:Q15532
GermOnline:ENSG00000141380 Uniprot:Q15532
Length = 418
Score = 147 (56.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 58/169 (34%), Positives = 66/169 (39%)
Query: 529 GYDDNHAPVQHPYGGHSN----SQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
G +D + Q+ +GG +Q Y G GY Q Y + Y P + + Y
Sbjct: 266 GQEDYYGD-QYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEG 324
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPP 644
YQ P Q Y P P QQQYP G QQ YP P S P
Sbjct: 325 GNSQYGQQQDAYQGPPPQ-QGY-P--PQQQQYP----G--QQGYPGQQQGYGP-SQGGPG 373
Query: 645 ASAPGYPQQAGQAVPNY-P-QPGGQQAPSYGQVAPTAGY--GQYTNTQQ 689
P YPQ GQ Y P QPG Q P Q P GY GQY N QQ
Sbjct: 374 PQYPNYPQGQGQQYGGYRPTQPGPPQPP---QQRPY-GYDQGQYGNYQQ 418
Score = 112 (44.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 56/180 (31%), Positives = 61/180 (33%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQ 599
PY P G Q Y+ QY G P +G Q Y Y Q
Sbjct: 252 PYRPPQQGPPQQYSG--QEDYYGDQYSHGGQG-PPEGMNQQYYPDGHNDYGYQQPSYPEQ 308
Query: 600 V---P---SAQSY--GPNVPHQQQYPYATSGPTQQTYPSYGSA-PAPDSYNQPPASAPGY 650
P S+Q Y G N + QQ P QQ YP P Y P GY
Sbjct: 309 GYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGY---PGQQQGY 365
Query: 651 -PQQAGQA--VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY-QG 706
P Q G PNYPQ GQQ YG Y TQ P+ P YGY QG
Sbjct: 366 GPSQGGPGPQYPNYPQGQGQQ------------YGGYRPTQPGPPQPP--QQRPYGYDQG 411
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 73/252 (28%), Positives = 88/252 (34%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYG-KPPYGM-PAQGTQ--PQSYXXXXXXXXXXXXXYQSQV 600
S S PV +Q + G YG +P M P QG Q YQ Q
Sbjct: 170 SQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQ 229
Query: 601 PS----AQ-SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY-NQPPASAPGYPQQA 654
P Q + G ++ Q+Q P P QQ P S D Y +Q G P+
Sbjct: 230 PPMGMMGQVNQGNHMMGQRQIP--PYRPPQQGPPQQYSGQE-DYYGDQYSHGGQGPPEGM 286
Query: 655 GQAV-PNYPQPGGQQAPSYGQVAPTAGYGQ-YTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
Q P+ G Q PSY P GY + Y ++ Q Y E N+ YG Q QD
Sbjct: 287 NQQYYPDGHNDYGYQQPSY----PEQGYDRPYEDSSQHYYEG---GNSQYGQQ--QDAYQ 337
Query: 713 X---XXXXXXXXXXXTGQPGY-AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQ 768
GQ GY Q PS Q Y QG GY T Q
Sbjct: 338 GPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPT---Q 394
Query: 769 PGYPQYDSTQMY 780
PG PQ + Y
Sbjct: 395 PGPPQPPQQRPY 406
Score = 58 (25.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 19/66 (28%), Positives = 24/66 (36%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNY 443
+ P GP Q S + P + + G Y P +P N Q P NY
Sbjct: 132 HMPMQGPGPNQLNMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 190
Query: 444 GGPPNM 449
G PNM
Sbjct: 191 GPRPNM 196
Score = 58 (25.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 34/141 (24%), Positives = 55/141 (39%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 109 MVG-GGPPAPHMQNQMNGQMPG-PNHMPMQGPGPNQ--LNMTNSSMNMPSSSHGSMGGYN 164
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGS---HPSQ-PMAYDYPQRGPYPSQNPH 423
+V PS+ S NQ P G +GPR + P+Q PM + P Y
Sbjct: 165 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQGG 221
Query: 424 YPHLPYGNYPPQQMAPRSNYG 444
H G PP M + N G
Sbjct: 222 GQHYQ-GQQPPMGMMGQVNQG 241
Score = 54 (24.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 22/73 (30%), Positives = 29/73 (39%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSH----PSQPMAYDYPQRG------PYPS-QNPHYPHLPY 429
N Q+ P PT GP G + P P +++ P G P P QN +P
Sbjct: 70 NMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPG 129
Query: 430 GNYPPQQMAPRSN 442
N+ P Q P N
Sbjct: 130 PNHMPMQ-GPGPN 141
Score = 46 (21.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 16/55 (29%), Positives = 21/55 (38%)
Query: 394 PQWGPR---GSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG 445
PQ G + G P M Q Q P+ P PPQQ + + +Y G
Sbjct: 218 PQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYG 272
>UNIPROTKB|G4N5A5 [details] [associations]
symbol:MGG_16887 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 EMBL:CM001233 GO:GO:0003723
RefSeq:XP_003712769.1 ProteinModelPortal:G4N5A5
EnsemblFungi:MGG_16887T0 GeneID:12985187 KEGG:mgr:MGG_16887
Uniprot:G4N5A5
Length = 370
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 64/218 (29%), Positives = 97/218 (44%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
V + + GV+IGK G + L+ +G K +++ H R + I G I KA
Sbjct: 52 VSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQG-VH--DRVLTITGGCEGISKAY-- 106
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
AV+A A G+PS+ G+ ++ +++ + + ++G IIGR G IK +Q S
Sbjct: 107 --AVVARALLEGAPSM---GMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVS 161
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ-EMIKEVLSQTVRPSTLSGGFNQQA 384
G R+ + LP+ S ER+V V G I+ A E+ K ++ R G
Sbjct: 162 GVRMVAQKEMLPQ---STERVVEVQGTPEGIQRAVWEICKCLIDDWQR------GTGTVL 212
Query: 385 YRPRV---PTGPPQWGPRGSHPSQPMAYDYPQRGPYPS 419
Y P V P G Q G G+ Y RG Y S
Sbjct: 213 YNPVVRTQPAGATQMGSSGA------GYGTSNRGDYSS 244
Score = 98 (39.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 284 RGLATAQASGAAEQVE-IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS 342
RG T +G Q + I +P + VG IIGR G I ++ SGARI + P D +
Sbjct: 275 RGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA--PH-DET 331
Query: 343 KERIVRVTGDMRQIEIAQEMIKEVL-SQTVRPSTLS 377
ER+ + G + E A ++ E L ++ +R S ++
Sbjct: 332 GERMFTIMGSAKANETALFLLYENLEAEKMRRSQMT 367
Score = 86 (35.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 23/94 (24%), Positives = 49/94 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ + +N++G +IG+ G I+++Q SG +++ + P + R VE+ GT I +A
Sbjct: 135 KLLISHNQMGTIIGRQGLKIKHIQDVSG--VRMVAQKEMLPQSTERVVEVQGTPEGIQRA 192
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE 296
I + + G+ +++ + Q +GA +
Sbjct: 193 VWEICKCLIDDWQRGTGTVLYNPVVRTQPAGATQ 226
>UNIPROTKB|O73932 [details] [associations]
symbol:igf2bp3-a "Insulin-like growth factor 2 mRNA-binding
protein 3-A" species:8355 "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IPI] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005783 GO:GO:0007275 GO:GO:0005634 GO:GO:0006417
GO:GO:0006355 GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003730 GO:GO:0030529 GO:GO:0051028
EMBL:AF055923 EMBL:AF064634 EMBL:BC170196 EMBL:BC170224
EMBL:BC170477 EMBL:BC170479 RefSeq:NP_001081752.1 UniGene:Xl.319
HSSP:Q9Y6M1 ProteinModelPortal:O73932 SMR:O73932 IntAct:O73932
PRIDE:O73932 GeneID:394293 KEGG:xla:394293 CTD:394293
Xenbase:XB-GENE-864935 HOVERGEN:HBG052725 KO:K13197 Uniprot:O73932
Length = 594
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 62/194 (31%), Positives = 90/194 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P A R V I G KA+
Sbjct: 425 IPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PAEG-PDAKLRMVIITGPPEAQFKAQGR 482
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + G V L T IKVP+ G +IG+GG+T+ LQ +
Sbjct: 483 IYGKLKEENFFGPKEEVK--LET----------HIKVPSYAAGRVIGKGGKTVNELQNLT 530
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
A + + P D + E +V++TG ++AQ I+E+L+Q R QQ
Sbjct: 531 SAEVVVPRDQTP--DENDEVVVKITGHFYASQLAQRKIQEILAQVRR--------QQQQQ 580
Query: 386 RPRVPTGPPQWGPR 399
+ V +G PQ PR
Sbjct: 581 QKTVQSGQPQ--PR 592
Score = 90 (36.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+E V + +P VG IIG+ G+ IK L +GA I++ P EG +K R+V +TG
Sbjct: 418 SETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA---EGPDAKLRMVIITG 471
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G++ KA
Sbjct: 290 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIEPCAKA 349
Query: 263 EKLINAVIAEA 273
E+ I I E+
Sbjct: 350 EEEIMKKIRES 360
>UNIPROTKB|F8VWQ4 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 EMBL:AC068889
EMBL:AC023509 HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01021922
ProteinModelPortal:F8VWQ4 SMR:F8VWQ4 PRIDE:F8VWQ4
Ensembl:ENST00000550927 ArrayExpress:F8VWQ4 Bgee:F8VWQ4
Uniprot:F8VWQ4
Length = 308
Score = 112 (44.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 287 ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI 346
A AS E+ +PN+ +G IIGR G I ++ SGA+I++ P +GS +R
Sbjct: 222 AGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN---PV-EGSTDRQ 277
Query: 347 VRVTGDMRQIEIAQEMIKEVLS 368
V +TG I +AQ +I LS
Sbjct: 278 VTITGSAASISLAQYLINVRLS 299
Score = 90 (36.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP ++ G LIGK G I+ ++ ++GA++Q+ D P++ R + I G +I +
Sbjct: 43 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGIPQSIIEC 100
Query: 263 EKLINAVIAEADAGGSP 279
K I V+ E + P
Sbjct: 101 VKQICVVMLETLSQSPP 117
>ZFIN|ZDB-GENE-040426-2122 [details] [associations]
symbol:zgc:65870 "zgc:65870" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-040426-2122
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:CU856621
EMBL:AL954840 EMBL:CABZ01011786 EMBL:CABZ01011787 EMBL:CABZ01011788
EMBL:CABZ01011789 EMBL:CABZ01011790 EMBL:CU462880 EMBL:CU469461
IPI:IPI01016643 Ensembl:ENSDART00000137945 Bgee:F1Q8M8
Uniprot:F1Q8M8
Length = 464
Score = 145 (56.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 46/172 (26%), Positives = 88/172 (51%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ S A+I I+ + + R + I G
Sbjct: 26 TLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCPE-----RIITITGATEC 80
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ +A +I + E A +LVA G T++ V +P + G +IG+GG I
Sbjct: 81 VFRAFTMITIKLEEDLA----ALVANGTVTSKPPVTLRLV---IPASQCGSLIGKGGSKI 133
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
K ++ ++GA++Q+ LP S ER V ++G I ++I V+ ++
Sbjct: 134 KEIREKTGAQVQVAGDLLPN---STERGVTISGSQDAIIQCVKLICTVILES 182
Score = 106 (42.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 287 ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI 346
A ++S E+ +PN+ +G IIGR G I ++ SGA+I++ Q D + +R
Sbjct: 271 AGIESSSQTASQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQL----DSTSDRH 326
Query: 347 VRVTGDMRQIEIAQEMIK---EVLSQTVRPSTLS 377
V +TG I +AQ +I E T + S++S
Sbjct: 327 VTITGSPISINLAQYLITSCLETAKSTAQSSSMS 360
Score = 102 (41.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P ++ G LIGK G I+ ++ +GA++Q+ D P++ R V I G+ I +
Sbjct: 114 RLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVA--GDLLPNSTERGVTISGSQDAIIQC 171
Query: 263 EKLINAVIAEADAGGS 278
KLI VI E+ G+
Sbjct: 172 VKLICTVILESPPKGA 187
Score = 39 (18.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 13/53 (24%), Positives = 19/53 (35%)
Query: 728 PGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMY 780
PG A Q + + VAQG TV Q G P + +++
Sbjct: 197 PGAVLLAGNQVFETSEFASHPLFSVAQGGLDLQQAYTVQNQYGIPHSELAKLH 249
>FB|FBgn0038642 [details] [associations]
symbol:Muc91C "Mucin 91C" species:7227 "Drosophila
melanogaster" [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] [GO:0031012 "extracellular matrix"
evidence=ISM] [GO:0022008 "neurogenesis" evidence=IMP]
EMBL:AE014297 GO:GO:0022008 eggNOG:NOG12793 GO:GO:0031012
GO:GO:0005201 GeneTree:ENSGT00700000104744 RefSeq:NP_650744.1
UniGene:Dm.10760 EnsemblMetazoa:FBtr0083687 GeneID:42246
KEGG:dme:Dmel_CG7709 UCSC:CG7709-RA CTD:42246 FlyBase:FBgn0038642
InParanoid:Q9VE45 OMA:GPYPSAP PhylomeDB:Q9VE45 GenomeRNAi:42246
NextBio:827869 ArrayExpress:Q9VE45 Bgee:Q9VE45 Uniprot:Q9VE45
Length = 950
Score = 155 (59.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 104/431 (24%), Positives = 140/431 (32%)
Query: 374 STLSGG-FNQQAYRPRVPTGPPQWGPRGSH---PSQPMAYDYPQRGPYP-SQNPHY--PH 426
S SGG + A RP GPP P S+ PS+P + Y GP P ++ PH+ P
Sbjct: 170 SASSGGPYPAAAPRPSSSYGPPASRPSSSYGPPPSRP-SQSY---GPPPQAKKPHHRRPS 225
Query: 427 LPYGNYPPQQMAPRSNYGGPPNMXXXXXXXXXXXXXXXHVSDRPVSVSHSTSIPGHXXXX 486
YG P+ P +YG PP+ + + P S + P
Sbjct: 226 SSYG--APRPAPPSQSYGAPPS--ASYGPPKSAPPSQSYGAPAPPSSKYG---PPKSAPS 278
Query: 487 XXXXXXXXXXXXXNYNYGQPHTSEYXXXXXXXXXXXXXXX-GHGYDDNHAPVQHPYGGHS 545
+Y P +S Y Y AP YG +
Sbjct: 279 SSYGAPRPAAPSSSYGAPAPPSSSYGAPAAPSSSYGAPAAPSSSYGAPAAP-SSSYGAPA 337
Query: 546 NSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQS 605
Y S YG P + G P Y + P + S
Sbjct: 338 PPSKSYGAPAPPSS----SYGAPAAPSKSYGA-PAPPSSSYGAPAPPSSSYGAPAPPSPS 392
Query: 606 YGPNVPHQQQY-----PYATSGPTQQTYPSYGSAPAP--DSYNQP--PASAPGYPQQAGQ 656
YG P + Y P ++ G SYG APAP SY P P+S+ G P
Sbjct: 393 YGAPAPPSKSYGAPAPPSSSYGAPAAPSKSYG-APAPPSSSYGAPAPPSSSYGAPSAPSS 451
Query: 657 AV-PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXX 715
+ P P P + SYG P A Y + P +P++S YG
Sbjct: 452 SYGPPKPAPAPPSS-SYG-APPQAPVSSYL-PPASRPSKPSSS---YGAPSVSSFVPLPS 505
Query: 716 XXXXXXXXXTGQPGYAQPAATQP--SYDQSASQSTAYGVAQGTAAAGYGKTVSP-QPGYP 772
Y P+ TQ S S+ S++Y ++ YG S QP P
Sbjct: 506 APST---------NYGAPSKTQSLGSSGYSSGPSSSYEAPVAPPSSSYGAPSSSFQPISP 556
Query: 773 QYDSTQMYAAP 783
S Y AP
Sbjct: 557 PSSS---YGAP 564
Score = 153 (58.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 69/236 (29%), Positives = 91/236 (38%)
Query: 564 QYGKPP---YGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYAT 620
+YG PP Y PA G P S+ Y + SA S GP P P ++
Sbjct: 136 KYGAPPVSSYLPPASGPAP-SFNSAPSSS------YAAPSQSASSGGP-YPAAAPRPSSS 187
Query: 621 SGP-TQQTYPSYGSAPA-PD-SYNQPP-ASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVA 676
GP + SYG P+ P SY PP A P + + + P P Q SYG
Sbjct: 188 YGPPASRPSSSYGPPPSRPSQSYGPPPQAKKPHHRRPSSSYGAPRPAPPSQ---SYG-AP 243
Query: 677 PTAGYGQYTNT--QQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPG----- 729
P+A YG + Q+Y PA ++ YG + G P
Sbjct: 244 PSASYGPPKSAPPSQSYGA-PAPPSSKYGPPKSAPSSSYGAPRPAAPSSSYGAPAPPSSS 302
Query: 730 YAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY--PQYDSTQMYAAP 783
Y PAA SY A+ S++YG A ++ YG P Y P S+ Y AP
Sbjct: 303 YGAPAAPSSSYGAPAAPSSSYG-APAAPSSSYGAPAPPSKSYGAPAPPSSS-YGAP 356
Score = 126 (49.4 bits), Expect = 0.00034, P = 0.00034
Identities = 48/192 (25%), Positives = 75/192 (39%)
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSG-PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQ 656
++ P +Y P P Q P + G P +Y S PAP S+N P+S+ P Q+
Sbjct: 116 AEPPVNNAYLP--PSSPQRPSSKYGAPPVSSYLPPASGPAP-SFNSAPSSSYAAPSQSAS 172
Query: 657 AVPNYPQPGGQQAPSYGQVA--PTAGYGQY-TNTQQAYPEQPATSNAGYGYQGTQDXXXX 713
+ YP + + SYG A P++ YG + Q+Y P + + +
Sbjct: 173 SGGPYPAAAPRPSSSYGPPASRPSSSYGPPPSRPSQSYGPPPQAKKPHHR-RPSSSYGAP 231
Query: 714 XXXXXXXXXXXTGQPGYAQPAATQPS--YDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY 771
Y P + PS Y A S+ YG + ++ YG +P+P
Sbjct: 232 RPAPPSQSYGAPPSASYGPPKSAPPSQSYGAPAPPSSKYGPPKSAPSSSYG---APRPAA 288
Query: 772 PQYDSTQMYAAP 783
P + Y AP
Sbjct: 289 P----SSSYGAP 296
Score = 121 (47.7 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 63/269 (23%), Positives = 99/269 (36%)
Query: 541 YGGHSNSQPVYSQG---GLQSGYHQHQYGKPP---YGMPAQGTQP-----QSYXXXXXXX 589
YG S +Q + S G G S Y PP YG P+ QP SY
Sbjct: 511 YGAPSKTQSLGSSGYSSGPSSSYEAPV--APPSSSYGAPSSSFQPISPPSSSYGAPSSGS 568
Query: 590 XXXXXXYQ---SQVPSAQSYGPNVPHQQQYP---YATSGPTQQTYPSYGSAPAPDSYNQP 643
+ S + SA S G + Q P Y+ + + SY SAP+ SY+ P
Sbjct: 569 GSSSGSFSAAPSSLYSAPSKGSSGGSFQSAPSSSYSAPSASANSGGSYPSAPS-SSYSAP 627
Query: 644 PASAPGYPQQAGQAVPNY--PQPGGQQAPSYGQVAPTAGYGQYT---NTQQAYPEQPATS 698
+S+ A +Y P G Y AP++ Y + N+ +YP P++S
Sbjct: 628 SSSSSSGGPYASAPSSSYSAPSSGSNSGGPY-PAAPSSSYSAPSASANSGGSYPSAPSSS 686
Query: 699 ----NAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQ 754
+ G G +G P + P+++ + S++ Y A
Sbjct: 687 YSAPSPGSNSGGPYPAAPSSSYSAPSPSANSGGPYASAPSSSYSAPSSSSNSGGPYAAAP 746
Query: 755 GTAAAGYGKTVSPQPGYPQYDSTQMYAAP 783
++ + + S YP S+ Y+AP
Sbjct: 747 SSSYSAPSSSSSSGGPYPSAPSSS-YSAP 774
Score = 114 (45.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 55/256 (21%), Positives = 85/256 (33%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQG---TQPQSYXXXXXXXXXXXXXY 596
P +S P + GG Y P + G + P S Y
Sbjct: 683 PSSSYSAPSPGSNSGGPYPAAPSSSYSAPSPSANSGGPYASAPSSSYSAPSSSSNSGGPY 742
Query: 597 QSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS--------YGSAPAPDSYNQP-PASA 647
+ PS+ P+ PY ++ + + PS Y SAP+ SY P P+S
Sbjct: 743 AA-APSSSYSAPSSSSSSGGPYPSAPSSSYSAPSSSLSSGGPYPSAPS-SSYAAPSPSSN 800
Query: 648 PGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGT 707
G P A + +Y P + SYG AP +G + + P+T + + +
Sbjct: 801 SGGPYPAAPS-NSYSAPIAPPSSSYG--APASGPSPSFSAPSSSYGAPSTGSGSSSFSSS 857
Query: 708 QDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSP 767
Y P+ T + S++ S++Y AG + P
Sbjct: 858 SSSFSGASSSSSAGYPSAPSSSYGAPS-TGSGHSFSSAPSSSYSAPP----AGGSSSSGP 912
Query: 768 QPGYPQYDSTQMYAAP 783
P P DS Y P
Sbjct: 913 YPSAPSQDSGYEYNGP 928
Score = 91 (37.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 32/82 (39%), Positives = 39/82 (47%)
Query: 372 RPSTLSGGFNQQAYRPRVPTGPPQWG-PRGSHPSQ-----PMA-YDYPQRGPYPSQNPHY 424
RPS S G QA +P +G PR + PSQ P A Y P+ P PSQ+
Sbjct: 205 RPSQ-SYGPPPQAKKPHHRRPSSSYGAPRPAPPSQSYGAPPSASYGPPKSAP-PSQSYGA 262
Query: 425 PHLPYGNYPPQQMAPRSNYGGP 446
P P Y P + AP S+YG P
Sbjct: 263 PAPPSSKYGPPKSAPSSSYGAP 284
Score = 84 (34.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 393 PPQWGPRGSHPSQPMA-YDYPQR-----GPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGP 446
PP GP S S P + Y P + GPYP+ P P YG PP P S+YG P
Sbjct: 147 PPASGPAPSFNSAPSSSYAAPSQSASSGGPYPAAAPR-PSSSYG--PPASR-PSSSYGPP 202
Query: 447 PN 448
P+
Sbjct: 203 PS 204
Score = 52 (23.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 36/131 (27%), Positives = 53/131 (40%)
Query: 328 RIQLIPQHLPEGDGSKE--RIVRV----TGDMRQIEIAQEMIKE---VLSQTVRPSTL-- 376
R+Q P++L E G+ E R++ + T E A M + V++ V +L
Sbjct: 53 RLQSAPKNLKEAAGAHENVRLICIRSSSTSSSSPGEAASVMRVQLFGVIAVAVVAVSLVR 112
Query: 377 SGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMA-YDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
G +P PQ P + + P++ Y P GP PS N P Y P
Sbjct: 113 DVGAEPPVNNAYLPPSSPQ-RPSSKYGAPPVSSYLPPASGPAPSFNSA-PSSSYA--APS 168
Query: 436 QMAPRSNYGGP 446
Q A + GGP
Sbjct: 169 QSA---SSGGP 176
Score = 42 (19.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/23 (47%), Positives = 11/23 (47%)
Query: 428 PYGN-Y-PPQQ-MAPRSNYGGPP 447
P N Y PP P S YG PP
Sbjct: 119 PVNNAYLPPSSPQRPSSKYGAPP 141
>UNIPROTKB|D4ABC5 [details] [associations]
symbol:Ss18 "Protein Ss18" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] RGD:1311919 GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0000902
GO:GO:0048013 GO:GO:0005881 GO:GO:0030374
GeneTree:ENSGT00500000044808 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 CTD:6760 KO:K15623 OrthoDB:EOG4RFKTH IPI:IPI00569484
RefSeq:NP_001094370.1 UniGene:Rn.1014 ProteinModelPortal:D4ABC5
Ensembl:ENSRNOT00000032454 GeneID:361295 KEGG:rno:361295
NextBio:675851 ArrayExpress:D4ABC5 Uniprot:D4ABC5
Length = 418
Score = 142 (55.0 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 57/169 (33%), Positives = 66/169 (39%)
Query: 529 GYDDNHAPVQHPYGGHSN----SQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXX 584
G +D + Q+ +GG +Q Y G GY Q Y + Y P + + P
Sbjct: 266 GQEDYYGD-QYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEESSPHYCEG 324
Query: 585 XXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPP 644
YQ P Q Y P P QQQYP G QQ YP P + P
Sbjct: 325 GNSQYGQQQDAYQGPPPQ-QGY-P--PQQQQYP----G--QQGYPGQQQGYGP-TQGGPG 373
Query: 645 ASAPGYPQQAGQAVPNY-P-QPGGQQAPSYGQVAPTAGY--GQYTNTQQ 689
P YPQ GQ Y P QPG Q P Q P GY GQY N QQ
Sbjct: 374 PQYPNYPQGQGQQYGGYRPTQPGPPQPP---QQRPY-GYDQGQYGNYQQ 418
Score = 117 (46.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 58/217 (26%), Positives = 74/217 (34%)
Query: 537 VQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKP-PYGMPAQGTQPQSYXXXXXXXXXXXXX 595
+Q G + QP Q + G QH G+ P G+ Q Q S+
Sbjct: 198 MQPNQGPMMHQQPPSQQYSMPPGGAQHYQGQQAPMGLMGQVNQG-SHMMGQRQMPPYRPP 256
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD-SYNQPPASAPGYPQQA 654
Q P Q G + QY + GP + Y D Y QP GY +
Sbjct: 257 QQG--PPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPY 314
Query: 655 GQAVPNYPQPG----GQQAPSYGQVAPTAGYG----QYTNTQQAYPEQPATSNAGYGYQG 706
++ P+Y + G GQQ +Y P GY QY QQ YP Q G G
Sbjct: 315 EESSPHYCEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPG-QQGYPGQQQGYGPTQGGPG 373
Query: 707 TQDXXXXXXXXXXXXXXXTGQPGYAQPAATQP-SYDQ 742
Q QPG QP +P YDQ
Sbjct: 374 PQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQ 410
Score = 115 (45.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 53/175 (30%), Positives = 63/175 (36%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQ 599
PY P G Q Y+ QY G P +G Q Y Y Q
Sbjct: 252 PYRPPQQGPPQQYSG--QEDYYGDQYSHGGQG-PPEGMNQQYYPDGHND-------YGYQ 301
Query: 600 VPSAQSYGPNVPHQQQYP-YATSGPTQ--QTYPSYGSAPAPDSYNQPPASAPG---YP-Q 652
PS G + P+++ P Y G +Q Q +Y P Y PG YP Q
Sbjct: 302 QPSYPEQGYDRPYEESSPHYCEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQ 361
Query: 653 QAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY-QG 706
Q G P PG Q P+Y Q YG Y TQ P+ P YGY QG
Sbjct: 362 QQGYG-PTQGGPGPQY-PNYPQ-GQGQQYGGYRPTQPGPPQPP--QQRPYGYDQG 411
Score = 101 (40.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 48/140 (34%), Positives = 52/140 (37%)
Query: 528 HGYDDNHAPVQHPYGGHSNSQPVYSQGG-LQSGYHQHQYGKPPYGMPAQGTQPQSYXXXX 586
+GY P Q + S P Y +GG Q G Q Y PP P QG PQ
Sbjct: 298 YGYQQPSYPEQGYDRPYEESSPHYCEGGNSQYGQQQDAYQGPP---PQQGYPPQQQQYPG 354
Query: 587 XXXXXXXXXYQSQVPSAQSYGPNVPHQ-QQYPYATSGPTQQTYPSYG-SAPAPDSYNQPP 644
Y Q Q YGP QYP G QQ Y Y + P P QPP
Sbjct: 355 QQG------YPGQ---QQGYGPTQGGPGPQYPNYPQGQGQQ-YGGYRPTQPGPP---QPP 401
Query: 645 ASAP-GYPQQAGQAVPNYPQ 663
P GY Q GQ NY Q
Sbjct: 402 QQRPYGYDQ--GQ-YGNYQQ 418
Score = 65 (27.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 25/83 (30%), Positives = 33/83 (39%)
Query: 373 PSTLSGGFNQQAY----RPRVPTGPPQWGPRGSHPSQPMAY--DYPQRGPYPSQNPHYPH 426
P L G NQ ++ R P PPQ GP + Q Y Y G P + + +
Sbjct: 231 PMGLMGQVNQGSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQY 290
Query: 427 LPYGN--YPPQQMA-PRSNYGGP 446
P G+ Y QQ + P Y P
Sbjct: 291 YPDGHNDYGYQQPSYPEQGYDRP 313
Score = 59 (25.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 19/66 (28%), Positives = 24/66 (36%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNY 443
+ P GP Q S + P + + G Y P +P N Q P NY
Sbjct: 132 HMPMQGPGPSQLSMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 190
Query: 444 GGPPNM 449
G PNM
Sbjct: 191 GPRPNM 196
Score = 50 (22.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 37/142 (26%), Positives = 57/142 (40%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 109 MVG-GGPPAPHMQNQMNGQMPG-PNHMPMQGPGPSQ--LSMTNSSMNMPSSSHGSMGGYN 164
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNP---HY 424
+V PS+ S NQ P G +GPR P+ M P +GP Q P Y
Sbjct: 165 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPR---PNMNMQ---PNQGPMMHQQPPSQQY 215
Query: 425 PHLPYG--NYPPQQMAPRSNYG 444
P G +Y QQ AP G
Sbjct: 216 SMPPGGAQHYQGQQ-APMGLMG 236
>WB|WBGene00002717 [details] [associations]
symbol:let-526 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0003677 GO:GO:0010171 GO:GO:0040011
GO:GO:0005622 GO:GO:0040035 eggNOG:NOG12793 GO:GO:0007413
GO:GO:0040027 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 GO:GO:0001703
EMBL:FO080267 RefSeq:NP_491562.3 PaxDb:P91019 PRIDE:P91019
EnsemblMetazoa:C01G8.9a GeneID:3565337 KEGG:cel:CELE_C01G8.9
CTD:3565337 WormBase:C01G8.9a HOGENOM:HOG000019682
InParanoid:P91019 OMA:CESETEP NextBio:956091 ArrayExpress:P91019
Uniprot:P91019
Length = 1687
Score = 119 (46.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 28/68 (41%), Positives = 34/68 (50%)
Query: 385 YRPRVPTGPP-QWGPRGSHPSQPMAYD--YPQRGPYPSQNPHYPHLPYGNYPPQQMAPRS 441
+ P+ P PP +W P G+ P Y YP G P +P YPH YG YPP P +
Sbjct: 46 HHPQHPGMPPMEWRPPGAEYQMPPGYPAGYPPYGMPPRHHPGYPHPAYG-YPP----PGA 100
Query: 442 NYGGPPNM 449
YG PP M
Sbjct: 101 PYGYPPQM 108
Score = 98 (39.6 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 46/151 (30%), Positives = 52/151 (34%)
Query: 536 PVQHPYGGHSNSQPVYSQGGLQ---SGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
P QHP G P Y G +G+ G P YG P G P +
Sbjct: 686 PQQHP--GPYPGYPGYGPPGAMRPPAGFAPPP-GAP-YGYPP-GAPPPAGFHPSHPQHPQ 740
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ----PPASAP 648
Y + Q Y HQQQ G + YP Y P P Q PP A
Sbjct: 741 HAQYLAW--QQQRYHQQQQHQQQQQQGAPGGPRPPYP-YPGGPVPPGPPQNRMPPPPPAQ 797
Query: 649 GYPQQAGQAVPNYPQPG-GQQAPSYGQVAPT 678
G P +G A N QP G AP APT
Sbjct: 798 GAPSPSGAAGSNGKQPRYGTPAPPSRASAPT 828
Score = 96 (38.9 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 59/248 (23%), Positives = 79/248 (31%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
Q H ++Q Q Q+ Q Q P P+ PQ+ Q
Sbjct: 516 QQAAAAHHHAQ---QQAAAQAQAAQAQQASTP--APSTTPAPQAASSSQAAPTSGANT-Q 569
Query: 598 SQVPSAQSYGPNVPHQQQY------PYATSGPTQ--QTYPSYGSAPA--PDSYNQPPASA 647
PSA + P P + +G +Q PS G P+ PDS P ASA
Sbjct: 570 PATPSASNQPPTPASASASTTLHVEPASVAGGSQAGSRAPSAGPGPSATPDSSTIPSASA 629
Query: 648 PGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGT 707
Q + + P PS AP+ T+ Q P+QP G G
Sbjct: 630 AADAQTTTSSETSTPGEPTSSTPS-DTPAPSTSVPPPTSVQPPQPQQPPQGPPGP--PGP 686
Query: 708 QDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAA-AGYGKTVS 766
Q G PGY P A +P + YG G AG+ +
Sbjct: 687 QQHPGPY----------PGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPPAGFHPSHP 736
Query: 767 PQPGYPQY 774
P + QY
Sbjct: 737 QHPQHAQY 744
Score = 89 (36.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 57/248 (22%), Positives = 78/248 (31%)
Query: 530 YDDNHAPVQHPYGGHSNSQPVY-SQGGLQSGYHQHQ-YGK-PPYGMPAQGTQPQSYXXXX 586
Y N AP GG P + G+ YH +Q +G PP+ P P +
Sbjct: 417 YPGNGAP-----GGPPGGPPQFPGHPGMDPNYHYYQQHGMMPPH--PGHPGYPPQHMNAF 469
Query: 587 XXXXXXXXXYQSQVPSAQSYGPNVPH--QQQYPYATSGPTQQTYPSYGSAPAPDSYNQPP 644
P GP Q+ +Q Y ++ A A + Q
Sbjct: 470 SPGQYPGHQRPPGGPGGPPPGPQAMRAPMPQHMQEMDEHQRQWY-AHQQAAAAHHHAQQQ 528
Query: 645 ASAPGYPQQAGQAVPNYPQPG-GQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYG 703
A+A QA QA P QA S Q APT+G T A + P ++A
Sbjct: 529 AAAQAQAAQAQQASTPAPSTTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASAS 588
Query: 704 YQGTQDXXXXXXXXXXXXXXXTGQPG-YAQP-AATQPSYDQSASQSTAYGVAQGTAAAGY 761
+ + PG A P ++T PS +A T T
Sbjct: 589 TTLHVEPASVAGGSQAGSRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPT 648
Query: 762 GKTVSPQP 769
T S P
Sbjct: 649 SSTPSDTP 656
Score = 81 (33.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/67 (40%), Positives = 32/67 (47%)
Query: 390 PTGPPQWGPRGSHPSQ-PMAYDYPQRG---PYPSQNPHYP--HLPY---GNYPPQQMAPR 440
P GPPQ+ P HP P + Y Q G P+P +P YP H+ G YP Q P
Sbjct: 427 PGGPPQF-P--GHPGMDPNYHYYQQHGMMPPHPG-HPGYPPQHMNAFSPGQYPGHQRPP- 481
Query: 441 SNYGGPP 447
GGPP
Sbjct: 482 GGPGGPP 488
Score = 58 (25.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 28/108 (25%), Positives = 37/108 (34%)
Query: 542 GGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVP 601
GG P Y G + G Q++ PP PAQG S Y + P
Sbjct: 768 GGPRPPYP-YPGGPVPPGPPQNRMPPPP---PAQGAPSPS---GAAGSNGKQPRYGTPAP 820
Query: 602 SAQSYGPNV-PHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAP 648
+++ P P P + Q P+ GS A PA AP
Sbjct: 821 PSRASAPTPQPLSSTMPVVAPSTSTQPTPTTGSYLANTLATPGPAHAP 868
>MGI|MGI:1935147 [details] [associations]
symbol:Arid1a "AT rich interactive domain 1A (SWI-like)"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=ISO;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0042921 "glucocorticoid
receptor signaling pathway" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 MGI:MGI:1935147 GO:GO:0045893
GO:GO:0007399 GO:GO:0030521 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
eggNOG:NOG12793 CTD:8289 HOVERGEN:HBG058196 KO:K11653
OrthoDB:EOG437RD2 ChiTaRS:ARID1A GO:GO:0030520 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774 EMBL:AF268912
EMBL:CR751606 EMBL:BX537327 EMBL:CR925752 EMBL:BC082554
IPI:IPI00127131 IPI:IPI00955140 IPI:IPI00955160 IPI:IPI00974963
RefSeq:NP_001074288.1 UniGene:Mm.22478 ProteinModelPortal:A2BH40
SMR:A2BH40 DIP:DIP-58952N IntAct:A2BH40 MINT:MINT-4301934
STRING:A2BH40 PhosphoSite:A2BH40 PaxDb:A2BH40 PRIDE:A2BH40
Ensembl:ENSMUST00000008024 Ensembl:ENSMUST00000105897 GeneID:93760
KEGG:mmu:93760 UCSC:uc008vdh.1 UCSC:uc008vdj.1
GeneTree:ENSGT00550000074575 HOGENOM:HOG000232161 InParanoid:A2BH40
NextBio:351643 Bgee:A2BH40 Genevestigator:A2BH40 GO:GO:0006325
Uniprot:A2BH40
Length = 2283
Score = 155 (59.6 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 61/191 (31%), Positives = 74/191 (38%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQ-PVYSQGGLQSGYHQHQYGK--PPYGM--P-AQGTQPQ 580
GHGY P Q PYG + + P+ QG QS Y + PPYG P A G Q Q
Sbjct: 416 GHGY-----PGQ-PYGSQTPQRYPMTMQGRAQSAMGSLSYAQQIPPYGQQGPSAYGQQGQ 469
Query: 581 S-YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDS 639
+ Y Y Q PS + P QQ P Q + P Y P+
Sbjct: 470 TPYYNQQSPHPQQQPPYAQQPPSQTPHAQ--PSYQQQPQTQQPQLQSSQPPYSQQPSQPP 527
Query: 640 YNQPPASAPGYP---QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPE-QP 695
+ Q P P QQ Q+ P Y QP Q +P Y Q P + Q AYP+ QP
Sbjct: 528 HQQSPTPYPSQQSTTQQHPQSQPPYSQPQAQ-SP-YQQQQPQQPASSSLSQQAAYPQPQP 585
Query: 696 ATSN-AGYGYQ 705
S Y Q
Sbjct: 586 QQSQQTAYSQQ 596
Score = 150 (57.9 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 80/265 (30%), Positives = 95/265 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGK--P-PYGMPAQGTQPQSYXXXXXXX 589
+HAP+ P QP+ QS Q GK P PYG GT P S
Sbjct: 360 HHAPMS-PGSSGGGGQPLARTP--QSSSPMDQMGKMRPQPYG----GTNPYSQQQGPPSG 412
Query: 590 XXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPG 649
Y Q P YG P Q+YP G Q S A Y Q SA
Sbjct: 413 PQQGHGYPGQ-P----YGSQTP--QRYPMTMQGRAQSAMGSLSYAQQIPPYGQQGPSA-- 463
Query: 650 YPQQAGQAVPNYPQ--PGGQQAPSYGQVAPT-AGYGQYTNTQQAYPEQPA--TSNAGYGY 704
Y QQ GQ P Y Q P QQ P Y Q P+ + Q + QQ +QP +S Y
Sbjct: 464 YGQQ-GQT-PYYNQQSPHPQQQPPYAQQPPSQTPHAQPSYQQQPQTQQPQLQSSQPPYSQ 521
Query: 705 QGTQDXXXXXXXXXXXXXXXT-----GQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA 759
Q +Q T QP Y+QP A P Q Q + ++Q A
Sbjct: 522 QPSQPPHQQSPTPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSSLSQ---QA 578
Query: 760 GYGKTVSPQPGYPQYDSTQMYAAPR 784
Y PQP PQ Y+ R
Sbjct: 579 AY-----PQP-QPQQSQQTAYSQQR 597
Score = 96 (38.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/109 (34%), Positives = 47/109 (43%)
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQP 664
S G P QQQ P A S P Q + S P D YNQ + YP A A P
Sbjct: 1395 SAGQGQPQQQQLPAAQSQPASQPQAAQPS-PQQDVYNQ---YSNAYPASATAATDRRPAG 1450
Query: 665 GGQ-QAP-SYGQVAPTAGYGQYTNTQQAYPEQ----PATSNAGYGYQGT 707
G Q Q P +G+ +A G ++ QQ P Q P ++A QGT
Sbjct: 1451 GPQNQFPFQFGRDRVSAPPG--SSAQQNMPPQMMGGPIQASAEVAQQGT 1497
Score = 87 (35.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 31/88 (35%), Positives = 39/88 (44%)
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAY-----DYPQRGPYPSQNP-------H-Y 424
G + Q + P G Q+GP+G +P QP +YP G S NP H
Sbjct: 787 GSYQQNSMGSYGPQGS-QYGPQGGYPRQPNYNALPNANYPNAGMAGSMNPMGAGGQMHGQ 845
Query: 425 PHLP-YGNYPPQQMAPRSNYGGP--PNM 449
P +P YG PP +MA S P PNM
Sbjct: 846 PGIPPYGTLPPGRMAHASMGNRPYGPNM 873
Score = 63 (27.2 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 22/65 (33%), Positives = 25/65 (38%)
Query: 377 SGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPY--PSQNPHYPHLPYGN 431
SGG Q R P G QP P Q+GP P Q YP PYG+
Sbjct: 369 SGGGGQPL--ARTPQSSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS 426
Query: 432 YPPQQ 436
PQ+
Sbjct: 427 QTPQR 431
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 397 GPRGSHP-SQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
G G P + P + P N +YP+ PPQ A S GG P
Sbjct: 189 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTP 240
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 16/58 (27%), Positives = 19/58 (32%)
Query: 392 GPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP-HLPYGNYPPQQMAPRSNYGGPPN 448
GP Q P+ YP R YP Y P G P A + PP+
Sbjct: 198 GPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGSGAAAAAGSKPPPS 255
Score = 37 (18.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 14/52 (26%), Positives = 20/52 (38%)
Query: 397 GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPPN 448
GP G+ P + GP P+ N + P P G + G PP+
Sbjct: 91 GP-GAEPD--LKNSNGNAGPRPALNNNLPEPPGGGGGGGSSSS-DGVGAPPH 138
>UNIPROTKB|J3KQU3 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 Ensembl:ENST00000449198 Uniprot:J3KQU3
Length = 277
Score = 151 (58.2 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 53/160 (33%), Positives = 78/160 (48%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 87 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 137
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
PN GLIIG+GG T+K + +SGA +QL + P+G +ER+V V+G+ Q A E+
Sbjct: 138 PNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVEL 195
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGP-PQWGPRGS 401
I Q ++ SG +Y V TGP P GS
Sbjct: 196 I----IQKIQEDPQSGSCLNISYA-NV-TGPVANSNPTGS 229
>MGI|MGI:1890359 [details] [associations]
symbol:Igf2bp3 "insulin-like growth factor 2 mRNA binding
protein 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0048027 "mRNA 5'-UTR
binding" evidence=ISO] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
MGI:MGI:1890359 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048027 GO:GO:0003730
HSSP:Q9Y6M1 HOVERGEN:HBG052725 KO:K13197 eggNOG:NOG249985
GeneTree:ENSGT00530000063171 HOGENOM:HOG000000675 OrthoDB:EOG405S0T
CTD:10643 OMA:EAQDTKF ChiTaRS:Igf2bp3 EMBL:AK088465 EMBL:AK011689
EMBL:AK147140 EMBL:BC045138 EMBL:BC049082 IPI:IPI00331315
RefSeq:NP_076159.3 UniGene:Mm.281018 ProteinModelPortal:Q9CPN8
SMR:Q9CPN8 STRING:Q9CPN8 PhosphoSite:Q9CPN8 PaxDb:Q9CPN8
PRIDE:Q9CPN8 Ensembl:ENSMUST00000031838 GeneID:140488
KEGG:mmu:140488 UCSC:uc009bwi.2 InParanoid:Q9CPN8 NextBio:369800
Bgee:Q9CPN8 Genevestigator:Q9CPN8 Uniprot:Q9CPN8
Length = 579
Score = 157 (60.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 58/190 (30%), Positives = 92/190 (48%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+A P A R V I G KA+
Sbjct: 412 IPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEA-PDAKVRMVIITGPPEAQFKAQGR 469
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I I E + SP + + I+VP+ G +IG+GG+T+ LQ+ S
Sbjct: 470 IYGKIKEENFV-SPKEEVK-----------LEAHIRVPSFAAGRVIGKGGKTVNELQSLS 517
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
A + + P D + + +V++TG ++AQ I+E+L+Q + +QQ
Sbjct: 518 SAEVVVPRDQTP--DENDQVVVKITGHFYACQVAQRKIQEILTQVKQ--------HQQ-- 565
Query: 386 RPRVPTGPPQ 395
+ + +GPPQ
Sbjct: 566 QKALQSGPPQ 575
>UNIPROTKB|F1SFQ4 [details] [associations]
symbol:PCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050687 "negative regulation of defense response to
virus" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0043161 GO:GO:0003723
GO:GO:0050687 GeneTree:ENSGT00550000074311 CTD:5094 KO:K13162
OMA:CVVMLEL EMBL:CU928648 RefSeq:NP_001231441.1 UniGene:Ssc.4977
Ensembl:ENSSSCT00000000294 GeneID:397665 KEGG:ssc:397665
ArrayExpress:F1SFQ4 Uniprot:F1SFQ4
Length = 353
Score = 153 (58.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 61/238 (25%), Positives = 112/238 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + I + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKG 177
Query: 379 GFNQQAYRPRVPTGPPQW-GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
YRP+ + P + G + + + + +P P NP P Y Q
Sbjct: 178 V--TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 233
>UNIPROTKB|Q15366 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0005737
"cytoplasm" evidence=IDA;NAS] [GO:0016071 "mRNA metabolic process"
evidence=NAS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0050687 "negative regulation of defense response
to virus" evidence=IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032480 "negative
regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 Reactome:REACT_6900 GO:GO:0005654 GO:GO:0043161
GO:GO:0003677 Reactome:REACT_1675 GO:GO:0045087 EMBL:CH471054
GO:GO:0051607 GO:GO:0003723 GO:GO:0030529 EMBL:AC068889
GO:GO:0000398 EMBL:AC023509 GO:GO:0032480 GO:GO:0050687
eggNOG:NOG315872 HOGENOM:HOG000182823 HOVERGEN:HBG053520
EMBL:X78136 EMBL:AB188306 EMBL:AK292141 EMBL:AB208825 EMBL:BC001155
EMBL:BC071942 EMBL:BC107688 IPI:IPI00012066 IPI:IPI00216689
IPI:IPI00470509 IPI:IPI00791223 IPI:IPI00796337 PIR:S65679
RefSeq:NP_001092090.1 RefSeq:NP_001122383.1 RefSeq:NP_001122384.1
RefSeq:NP_001122385.1 RefSeq:NP_001122386.1 RefSeq:NP_005007.2
RefSeq:NP_114366.1 UniGene:Hs.546271 PDB:2AXY PDB:2JZX PDB:2P2R
PDB:2PQU PDB:2PY9 PDBsum:2AXY PDBsum:2JZX PDBsum:2P2R PDBsum:2PQU
PDBsum:2PY9 ProteinModelPortal:Q15366 SMR:Q15366 DIP:DIP-58934N
IntAct:Q15366 MINT:MINT-96192 STRING:Q15366 PhosphoSite:Q15366
DMDM:6707736 PaxDb:Q15366 PeptideAtlas:Q15366 PRIDE:Q15366
DNASU:5094 Ensembl:ENST00000359282 Ensembl:ENST00000359462
Ensembl:ENST00000439930 Ensembl:ENST00000447282
Ensembl:ENST00000546463 Ensembl:ENST00000548933
Ensembl:ENST00000552296 GeneID:5094 KEGG:hsa:5094 UCSC:uc001sdl.4
CTD:5094 GeneCards:GC12P053844 HGNC:HGNC:8648 HPA:HPA038356
MIM:601210 neXtProt:NX_Q15366 PharmGKB:PA32987 InParanoid:Q15366
KO:K13162 OMA:CVVMLEL ChiTaRS:PCBP2 EvolutionaryTrace:Q15366
GenomeRNAi:5094 NextBio:19648 ArrayExpress:Q15366 Bgee:Q15366
CleanEx:HS_PCBP2 Genevestigator:Q15366 GermOnline:ENSG00000197111
Uniprot:Q15366
Length = 365
Score = 153 (58.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 61/238 (25%), Positives = 112/238 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + I + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKG 177
Query: 379 GFNQQAYRPRVPTGPPQW-GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
YRP+ + P + G + + + + +P P NP P Y Q
Sbjct: 178 V--TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 233
>RGD|1309626 [details] [associations]
symbol:Pcbp2 "poly(rC) binding protein 2" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0050687 "negative regulation of defense response to virus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1309626 GO:GO:0003723 eggNOG:NOG315872
HOVERGEN:HBG053520 CTD:5094 KO:K13162 IPI:IPI00464805 EMBL:BC078906
RefSeq:NP_001013241.1 UniGene:Rn.106644 ProteinModelPortal:Q6AYU5
SMR:Q6AYU5 PRIDE:Q6AYU5 GeneID:363005 KEGG:rno:363005
UCSC:RGD:1309626 NextBio:682109 Genevestigator:Q6AYU5
Uniprot:Q6AYU5
Length = 365
Score = 153 (58.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 61/238 (25%), Positives = 112/238 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + I + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKG 177
Query: 379 GFNQQAYRPRVPTGPPQW-GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
YRP+ + P + G + + + + +P P NP P Y Q
Sbjct: 178 V--TIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 233
>ZFIN|ZDB-GENE-030131-5725 [details] [associations]
symbol:arid1ab "AT rich interactive domain 1Ab
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
ZFIN:ZDB-GENE-030131-5725 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 EMBL:CABZ01050711 EMBL:CT027837
IPI:IPI00485842 Ensembl:ENSDART00000084272 Bgee:F1RE50
Uniprot:F1RE50
Length = 2135
Score = 153 (58.9 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 53/175 (30%), Positives = 69/175 (39%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXX------XXXXXX 591
Q YG H Y Q Q+GY+ Q G P+G P Q + PQ
Sbjct: 370 QMGYGQHGPGG--YGQN--QAGYYGQQ-GPSPHGGPQQSSYPQQPSTGPGSQPPYSQQPS 424
Query: 592 XXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
QS Q GP+VP+Q Q PY+ + P Q+ G +P P S + P
Sbjct: 425 GTPHGQSGTSYGQPQGPHVPNQGQPPYSQT-PQSQS----GQSPFPQSQGPTQSQGPSQG 479
Query: 652 QQAGQAVPNYPQP---GGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYG 703
QQ Q+ P Y P GQ A G G Q + T + P QP+ +G G
Sbjct: 480 QQGSQSQPGYTHPPSGSGQPAQQQGPSQQQQGPPQ-SQTPSSAPPQPSQQTSGQG 533
Score = 129 (50.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 59/176 (33%), Positives = 68/176 (38%)
Query: 528 HGYDDNHAPVQHPYGGHSNSQPVYSQ--GGLQSGYHQHQYGKP--PYGMPAQGTQPQSYX 583
HG + Q P G SQP YSQ G G YG+P P+ +P QG P Y
Sbjct: 397 HGGPQQSSYPQQPSTG-PGSQPPYSQQPSGTPHGQSGTSYGQPQGPH-VPNQGQPP--YS 452
Query: 584 XXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQ-----YPYATSG---PTQQTYPSYGSAP 635
QSQ P+ QS GP+ Q Y + SG P QQ PS
Sbjct: 453 QTPQSQSGQSPFPQSQGPT-QSQGPSQGQQGSQSQPGYTHPPSGSGQPAQQQGPSQQQQG 511
Query: 636 APDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAPTAGYGQYTNTQQA 690
P S Q P+SAP P Q Q GQ PS Y Q P Q QQ+
Sbjct: 512 PPQS--QTPSSAPPQPSQ---------QTSGQGQPSPYSQTPPLQTQQQQQQQQQS 556
Score = 63 (27.2 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 24/59 (40%), Positives = 27/59 (45%)
Query: 397 GPRG-SHPSQPMAYDYPQRGPYP--SQNPHYPHLPYGNYPPQQ---MA-PRSNYGGPPN 448
GP G SHP MA +P P P S N HY P+ + QQ MA P PPN
Sbjct: 93 GPEGNSHPG--MAPHHPGAFPPPPYSYNQHYNRAPFHQHGGQQSPGMAGPAVMDPYPPN 149
Score = 51 (23.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/65 (33%), Positives = 24/65 (36%)
Query: 392 GPPQWGPRGSHPSQPMA---YDYPQR----GPYPSQNP-HYPHLPYGN-YPPQQMAPRSN 442
G P W R HP PM+ R GP H GN Y QQ P S+
Sbjct: 273 GHPAWQQRSHHPP-PMSPGNTGQANRTQPPGPMDQVGKIRGQHYGAGNPYSQQQGPPPSS 331
Query: 443 YGGPP 447
GPP
Sbjct: 332 QQGPP 336
>UNIPROTKB|J9P8W9 [details] [associations]
symbol:IGF2BP3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 KO:K13197 GeneTree:ENSGT00530000063171 CTD:10643
OMA:EAQDTKF EMBL:AAEX03009368 EMBL:AAEX03009369 EMBL:AAEX03009370
RefSeq:XP_539474.2 Ensembl:ENSCAFT00000046043 GeneID:482357
KEGG:cfa:482357 Uniprot:J9P8W9
Length = 579
Score = 156 (60.0 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 58/190 (30%), Positives = 91/190 (47%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+A P A R V I G KA+
Sbjct: 412 IPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEA-PDAKVRMVIITGPPEAQFKAQGR 469
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I I E + SP + + I+VP+ G +IG+GG+T+ LQ S
Sbjct: 470 IYGKIKEENFV-SPKEEVK-----------LEAHIRVPSFAAGRVIGKGGKTVNELQNLS 517
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
A + + P D + + +V++TG ++AQ I+E+L+Q + +QQ
Sbjct: 518 SAEVVVPRDQTP--DENDQVVVKITGHFYACQVAQRKIQEILTQVKQ--------HQQ-- 565
Query: 386 RPRVPTGPPQ 395
+ + +GPPQ
Sbjct: 566 QKALQSGPPQ 575
>UNIPROTKB|O00425 [details] [associations]
symbol:IGF2BP3 "Insulin-like growth factor 2 mRNA-binding
protein 3" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0017148 "negative regulation of
translation" evidence=ISS] [GO:0045182 "translation regulator
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0042035
"regulation of cytokine biosynthetic process" evidence=IC]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_116125 GO:GO:0017148 GO:GO:0000166
GO:GO:0006412 Gene3D:3.30.70.330 GO:GO:0045182 GO:GO:0048027
GO:GO:0003730 GO:GO:0042035 GO:GO:0009653 EMBL:AC005082
HOVERGEN:HBG052725 KO:K13197 eggNOG:NOG249985 HOGENOM:HOG000000675
OrthoDB:EOG405S0T CTD:10643 OMA:EAQDTKF EMBL:U76705 EMBL:U97188
EMBL:BX640800 EMBL:BX648488 EMBL:AC021876 EMBL:AC079780
EMBL:BC065269 IPI:IPI00165467 IPI:IPI00658000 RefSeq:NP_006538.2
UniGene:Hs.700696 PDB:2E44 PDBsum:2E44 ProteinModelPortal:O00425
SMR:O00425 IntAct:O00425 STRING:O00425 PhosphoSite:O00425
PaxDb:O00425 PRIDE:O00425 Ensembl:ENST00000258729 GeneID:10643
KEGG:hsa:10643 UCSC:uc003swf.3 UCSC:uc003swg.3
GeneCards:GC07M023316 HGNC:HGNC:28868 HPA:HPA002037 MIM:608259
neXtProt:NX_O00425 PharmGKB:PA128394576 InParanoid:O00425
PhylomeDB:O00425 ChiTaRS:Igf2bp3 EvolutionaryTrace:O00425
GenomeRNAi:10643 NextBio:40451 ArrayExpress:O00425 Bgee:O00425
CleanEx:HS_IGF2BP3 CleanEx:HS_IMP3 Genevestigator:O00425
Uniprot:O00425
Length = 579
Score = 156 (60.0 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 58/190 (30%), Positives = 91/190 (47%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+A P A R V I G KA+
Sbjct: 412 IPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEA-PDAKVRMVIITGPPEAQFKAQGR 469
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I I E + SP + + I+VP+ G +IG+GG+T+ LQ S
Sbjct: 470 IYGKIKEENFV-SPKEEVK-----------LEAHIRVPSFAAGRVIGKGGKTVNELQNLS 517
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
A + + P D + + +V++TG ++AQ I+E+L+Q + +QQ
Sbjct: 518 SAEVVVPRDQTP--DENDQVVVKITGHFYACQVAQRKIQEILTQVKQ--------HQQ-- 565
Query: 386 RPRVPTGPPQ 395
+ + +GPPQ
Sbjct: 566 QKALQSGPPQ 575
>UNIPROTKB|F1NCS2 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 EMBL:AADN02050467 EMBL:AADN02050468
EMBL:AADN02050469 IPI:IPI00590722 Ensembl:ENSGALT00000038026
Uniprot:F1NCS2
Length = 658
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 65/233 (27%), Positives = 80/233 (34%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ QP Y Q YG YG P + Q
Sbjct: 10 SQAAAQQGYSAYA-PQPAQGYAQTTQTYGQQSYGT--YGQPTDASYTQPQTTATYGQTAY 66
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYP---YATSG---PTQQTYPSYGSAPAPDSYNQPPAS 646
Y Q P+ + P P P Y T+ T + S AP +Y PA
Sbjct: 67 ATSY-GQPPTGYT-APTAPPAYSQPVQGYGTAAYDTSTATVTTTQASYAAPSAYGTQPAY 124
Query: 647 APGYPQQAGQAVPNYPQPGGQ-----QAPSY--GQVAPTAGYGQ----YTNTQQAYPEQP 695
P Y QQ AVP PQ G + Q PS G P+ GYGQ Y +YP QP
Sbjct: 125 -PAYGQQPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGYGQSNYSYPQVPASYPMQP 183
Query: 696 ATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSAS 745
T+ Y Y TQ Q Y+Q Q SY Q +S
Sbjct: 184 VTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYGQ-QNTYSQ----QTSYGQQSS 231
Score = 132 (51.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 74/255 (29%), Positives = 97/255 (38%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
YSQ Q GY + +P G AQ TQ Y +Q + +YG
Sbjct: 9 YSQAAAQQGYSAYA-PQPAQGY-AQTTQTYGQQSYGTYGQPTDASY-TQPQTTATYGQTA 65
Query: 611 PHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPASAPGYPQQAGQAVPNYPQPGG 666
+ Y +G T T P S P +Y+ A+ QA A P+ G
Sbjct: 66 -YATSYGQPPTGYTAPTAPPAYSQPVQGYGTAAYDTSTATVT--TTQASYAAPS--AYGT 120
Query: 667 QQA-PSYGQVAPTAGYGQ-YTNTQQAYPEQPATSNAGY-----GYQGTQDXXXXXXXXXX 719
Q A P+YGQ P A + ++ A QP +S GY GY G +
Sbjct: 121 QPAYPAYGQQPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGY-GQSNYSYPQVPASY 179
Query: 720 XXXXXTGQPGYAQPA--ATQPS-YDQSA-SQSTAYGVAQGTAA--AGYGKTVS----PQP 769
T P Y + +TQPS YDQS SQ + YG Q T + YG+ S P P
Sbjct: 180 PMQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYG-QQNTYSQQTSYGQQSSYAQQPPP 238
Query: 770 -GYPQYDSTQMYAAP 783
YP T Y+ P
Sbjct: 239 TSYPP--QTGSYSQP 251
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 39/154 (25%), Positives = 52/154 (33%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQG-TQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPN 609
Y+Q L G + Y + P P Q T P SY QS +YG
Sbjct: 158 YNQPSLGYGQSNYSYPQVPASYPMQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYGQQ 217
Query: 610 VPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQA 669
+ QQ Y Q P P SY+QPP+ GQ ++ Q
Sbjct: 218 NTYSQQTSYGQQSSYAQQPPPTSYPPQTGSYSQPPSQYSQQSSSYGQQ-SSFRQDHPSSM 276
Query: 670 PSYGQVAPTAGY-GQYTNTQQAYPEQPATSNAGY 702
YGQ + G+ G N + P+ GY
Sbjct: 277 NVYGQ--ESGGFSGPGENRNMSGPDNRGRGRGGY 308
Score = 55 (24.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 411 YPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
Y Y +Q P YP YG PP + PR G P
Sbjct: 112 YAAPSAYGTQ-PAYP--AYGQQPPAAVPPRPQDGSKP 145
>UNIPROTKB|F1MPB2 [details] [associations]
symbol:IGF2BP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048027 GO:GO:0003730
KO:K13197 GeneTree:ENSGT00530000063171 CTD:10643 OMA:EAQDTKF
EMBL:DAAA02010222 IPI:IPI00712553 RefSeq:NP_001179217.1
UniGene:Bt.80827 PRIDE:F1MPB2 Ensembl:ENSBTAT00000025854
GeneID:539650 KEGG:bta:539650 NextBio:20878131 Uniprot:F1MPB2
Length = 580
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 52/164 (31%), Positives = 80/164 (48%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+A P A R V I G KA+
Sbjct: 413 IPALSVGAIIGKQGQHIKQLSRFAGASIKIA-PAEA-PDAKVRMVIITGPPEAQFKAQGR 470
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I I E + SP + + I+VP+ G +IG+GG+T+ LQ S
Sbjct: 471 IYGKIKEENFV-SPKEEVK-----------LEAHIRVPSFAAGRVIGKGGKTVNELQNLS 518
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + + P D + + +V++TG ++AQ I+E+L+Q
Sbjct: 519 SAEVVVPRDQTP--DENDQVVVKITGHFYACQVAQRKIQEILTQ 560
>UNIPROTKB|F1NDA5 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00530000063105
EMBL:AADN02050467 EMBL:AADN02050468 EMBL:AADN02050469
IPI:IPI00820143 Ensembl:ENSGALT00000013237 OMA:PQTTATY
Uniprot:F1NDA5
Length = 690
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 65/233 (27%), Positives = 80/233 (34%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ QP Y Q YG YG P + Q
Sbjct: 10 SQAAAQQGYSAYA-PQPAQGYAQTTQTYGQQSYGT--YGQPTDASYTQPQTTATYGQTAY 66
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYP---YATSG---PTQQTYPSYGSAPAPDSYNQPPAS 646
Y Q P+ + P P P Y T+ T + S AP +Y PA
Sbjct: 67 ATSY-GQPPTGYT-APTAPPAYSQPVQGYGTAAYDTSTATVTTTQASYAAPSAYGTQPAY 124
Query: 647 APGYPQQAGQAVPNYPQPGGQ-----QAPSY--GQVAPTAGYGQ----YTNTQQAYPEQP 695
P Y QQ AVP PQ G + Q PS G P+ GYGQ Y +YP QP
Sbjct: 125 -PAYGQQPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGYGQSNYSYPQVPASYPMQP 183
Query: 696 ATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSAS 745
T+ Y Y TQ Q Y+Q Q SY Q +S
Sbjct: 184 VTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYGQ-QNTYSQ----QTSYGQQSS 231
Score = 132 (51.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 74/255 (29%), Positives = 97/255 (38%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
YSQ Q GY + +P G AQ TQ Y +Q + +YG
Sbjct: 9 YSQAAAQQGYSAYA-PQPAQGY-AQTTQTYGQQSYGTYGQPTDASY-TQPQTTATYGQTA 65
Query: 611 PHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPASAPGYPQQAGQAVPNYPQPGG 666
+ Y +G T T P S P +Y+ A+ QA A P+ G
Sbjct: 66 -YATSYGQPPTGYTAPTAPPAYSQPVQGYGTAAYDTSTATVT--TTQASYAAPS--AYGT 120
Query: 667 QQA-PSYGQVAPTAGYGQ-YTNTQQAYPEQPATSNAGY-----GYQGTQDXXXXXXXXXX 719
Q A P+YGQ P A + ++ A QP +S GY GY G +
Sbjct: 121 QPAYPAYGQQPPAAVPPRPQDGSKPAETSQPPSSTTGYNQPSLGY-GQSNYSYPQVPASY 179
Query: 720 XXXXXTGQPGYAQPA--ATQPS-YDQSA-SQSTAYGVAQGTAA--AGYGKTVS----PQP 769
T P Y + +TQPS YDQS SQ + YG Q T + YG+ S P P
Sbjct: 180 PMQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYG-QQNTYSQQTSYGQQSSYAQQPPP 238
Query: 770 -GYPQYDSTQMYAAP 783
YP T Y+ P
Sbjct: 239 TSYPP--QTGSYSQP 251
Score = 115 (45.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 39/154 (25%), Positives = 52/154 (33%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQG-TQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPN 609
Y+Q L G + Y + P P Q T P SY QS +YG
Sbjct: 158 YNQPSLGYGQSNYSYPQVPASYPMQPVTAPPSYPPTSYSSTQPSSYDQSTYSQQSTYGQQ 217
Query: 610 VPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQA 669
+ QQ Y Q P P SY+QPP+ GQ ++ Q
Sbjct: 218 NTYSQQTSYGQQSSYAQQPPPTSYPPQTGSYSQPPSQYSQQSSSYGQQ-SSFRQDHPSSM 276
Query: 670 PSYGQVAPTAGY-GQYTNTQQAYPEQPATSNAGY 702
YGQ + G+ G N + P+ GY
Sbjct: 277 NVYGQ--ESGGFSGPGENRNMSGPDNRGRGRGGY 308
Score = 55 (24.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 411 YPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
Y Y +Q P YP YG PP + PR G P
Sbjct: 112 YAAPSAYGTQ-PAYP--AYGQQPPAAVPPRPQDGSKP 145
>UNIPROTKB|F8W0G4 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01021465
ProteinModelPortal:F8W0G4 SMR:F8W0G4 PRIDE:F8W0G4
Ensembl:ENST00000551104 ArrayExpress:F8W0G4 Bgee:F8W0G4
Uniprot:F8W0G4
Length = 158
Score = 131 (51.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/153 (28%), Positives = 81/153 (52%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
K ++ +GA++Q+ LP S ER + + G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAG 150
>UNIPROTKB|B4DXP5 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HOGENOM:HOG000182823 HOVERGEN:HBG053520 OrthoDB:EOG46WZ8K
UniGene:Hs.546271 HGNC:HGNC:8648 ChiTaRS:PCBP2 EMBL:AK302067
IPI:IPI00900327 SMR:B4DXP5 STRING:B4DXP5 Ensembl:ENST00000552819
UCSC:uc001sdf.4 Uniprot:B4DXP5
Length = 322
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 62/238 (26%), Positives = 113/238 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + I + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKG 177
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG-----PYPSQNPHYPHLPYGN 431
YRP+ + P + ++ Q Y PQ Q H+P + +GN
Sbjct: 178 V--TIPYRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFP-MTHGN 231
>ZFIN|ZDB-GENE-030707-4 [details] [associations]
symbol:anxa11a "annexin A11a" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005544
"calcium-dependent phospholipid binding" evidence=IEA]
InterPro:IPR001464 InterPro:IPR008157 InterPro:IPR018252
InterPro:IPR018502 Pfam:PF00191 PRINTS:PR00196 PROSITE:PS00223
SMART:SM00335 ZFIN:ZDB-GENE-030707-4 GO:GO:0005509 eggNOG:NOG267770
GO:GO:0005544 Gene3D:1.10.220.10 PANTHER:PTHR10502 SUPFAM:SSF47874
HOVERGEN:HBG061815 PANTHER:PTHR10502:SF29 HSSP:P79134 EMBL:AY178801
IPI:IPI00498021 UniGene:Dr.77310 ProteinModelPortal:Q804G4
SMR:Q804G4 PRIDE:Q804G4 InParanoid:Q804G4 NextBio:20812811
ArrayExpress:Q804G4 Bgee:Q804G4 Uniprot:Q804G4
Length = 526
Score = 104 (41.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 31/80 (38%), Positives = 32/80 (40%)
Query: 629 PSYGSAPAPDSYNQP----PASAPGYPQQAGQAVPNYPQPGGQQAPSYGQV-APTAGYGQ 683
P G PA S NQP P G PQ G P P PG QQ PSY + APT
Sbjct: 122 PQPGGPPAV-SPNQPYGMYPQPGGGMPQNPGMGYPGGPPPG-QQMPSYPNIPAPTPSGPS 179
Query: 684 YTNTQQAYPEQPATSNAGYG 703
Y P P GYG
Sbjct: 180 YPRAPSPNPSMPGYGG-GYG 198
Score = 98 (39.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 378 GGFNQQ--AYRPRVPTGPPQWG---PR-GSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGN 431
GG+ Q AY P PPQ G P+ G +P QP AY PQ G +P Q YP +P G
Sbjct: 17 GGYPPQPGAYPPAAGGYPPQPGMYPPQAGGYPPQPGAYP-PQPGAFPGQPGQYPSVPSGG 75
Query: 432 Y 432
+
Sbjct: 76 W 76
Score = 80 (33.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 22/49 (44%), Positives = 23/49 (46%)
Query: 401 SHPSQPMAYDYP-QRGPYPSQNPHYPHLPYGNYPPQQ-MAPRSNYGGPP 447
S+P P YP Q G YP Q YP G YPPQ M P G PP
Sbjct: 2 SYPGYPPQSGYPPQGGGYPPQPGAYPPAA-GGYPPQPGMYPPQAGGYPP 49
Score = 70 (29.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 27/81 (33%), Positives = 28/81 (34%)
Query: 601 PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPASAPGYPQQAGQ 656
P A S PN P+ YP G Q Y P P SY PA P P
Sbjct: 127 PPAVS--PNQPYGM-YPQPGGGMPQNPGMGYPGGPPPGQQMPSYPNIPAPTPSGPSYPRA 183
Query: 657 AVPNYPQPGGQQAPSYGQVAP 677
PN PG YG AP
Sbjct: 184 PSPNPSMPG--YGGGYGGGAP 202
Score = 67 (28.6 bits), Expect = 0.00095, Sum P(2) = 0.00094
Identities = 21/63 (33%), Positives = 25/63 (39%)
Query: 607 GPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPA---SAPGYPQQAGQAVP 659
G +P Y P Q PSY + PAP SY + P+ S PGY G P
Sbjct: 143 GGGMPQNPGMGYPGGPPPGQQMPSYPNIPAPTPSGPSYPRAPSPNPSMPGYGGGYGGGAP 202
Query: 660 NYP 662
P
Sbjct: 203 AVP 205
>UNIPROTKB|E2RCH9 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:AAEX03016660 Ensembl:ENSCAFT00000010991 Uniprot:E2RCH9
Length = 370
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 66/242 (27%), Positives = 110/242 (45%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 99
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 100 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 152
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 153 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGS----HPSQPMAYDY--PQRGPYPSQNPHYPHLPYGN 431
+ A P + G + +G HP Q Q+ P+P P P G
Sbjct: 210 YR-PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFP-GT 267
Query: 432 YP 433
YP
Sbjct: 268 YP 269
>TAIR|locus:2184362 [details] [associations]
symbol:BTR1L "AT5G04430" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0003727
"single-stranded RNA binding" evidence=IPI] [GO:0046719 "regulation
of viral protein levels in host cell" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:CP002688 GO:GO:0008380 GO:GO:0003727 KO:K14944
IPI:IPI00533577 RefSeq:NP_850764.1 UniGene:At.4918
ProteinModelPortal:F4JW99 SMR:F4JW99 PRIDE:F4JW99
EnsemblPlants:AT5G04430.2 GeneID:830322 KEGG:ath:AT5G04430
OMA:RNIMEIT PhylomeDB:F4JW99 GO:GO:0046719 Uniprot:F4JW99
Length = 334
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 57/198 (28%), Positives = 92/198 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI-DKAEK 264
V N G +IGK G TI Q SGA+IQ++R+ + P R + I G++ + + E
Sbjct: 41 VSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLEL 100
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
+++ + +E A + R ++ + VPN G IIG+GG TIK
Sbjct: 101 ILDKLHSELHAEDGNEVEPR-----------RRIRLVVPNSSCGGIIGKGGATIKSFIEE 149
Query: 325 SGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKEV--LSQTVR-PSTLS 377
S A I++ P G +R+V ++G MR I++ + E SQ V P + +
Sbjct: 150 SKAGIKISPLD-NTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYA 208
Query: 378 G----GFNQQAYRPRVPT 391
G GF+ Y +P+
Sbjct: 209 GLFYSGFHGPPYAYALPS 226
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 33/102 (32%), Positives = 57/102 (55%)
Query: 272 EADAGGSPSLVARGLA----TAQASGAAEQVEIK--VPNEKVGLIIGRGGETIKGLQTRS 325
E+ A GSP +A+ +++A A + I+ V N G +IG+GG TI Q +S
Sbjct: 5 ESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKS 64
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GARIQL ++ G+ +RI+ ++G ++++ E+I + L
Sbjct: 65 GARIQL-SRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKL 105
Score = 119 (46.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A+ V I V +E +GL++GRGG I + +GARI++ + GD G+ +R V +T
Sbjct: 253 ASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDR----GDFMSGTTDRKVSIT 308
Query: 351 GDMRQIEIAQEMIKEVLSQTVRPST 375
G R I+ A+ MIK+ + +T
Sbjct: 309 GPQRAIQQAETMIKQKVDSATERTT 333
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VPN+ G +IGK G TI+ S A I+I+ + + R V + GT +A
Sbjct: 124 RLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA 183
Query: 263 EKLINAVIAEAD 274
LI A + E D
Sbjct: 184 IDLILAKLTEDD 195
>UNIPROTKB|C9JGE3 [details] [associations]
symbol:EWSR1 "Ewing sarcoma breakpoint region 1, isoform
CRA_e" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0000166
EMBL:CH471095 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:AC002059 EMBL:AL031186 EMBL:AC000026
UniGene:Hs.374477 HGNC:HGNC:3508 HOGENOM:HOG000038010 ChiTaRS:EWSR1
IPI:IPI00953325 SMR:C9JGE3 STRING:C9JGE3 Ensembl:ENST00000332050
UCSC:uc003aez.3 Uniprot:C9JGE3
Length = 583
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 75/268 (27%), Positives = 97/268 (36%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQTTATYGQTAY 66
Query: 593 XXXYQSQ-----VPSA-QSYGPNVPHQQQYPY----ATSGPTQQTYPS---YGSAPAPDS 639
Y P+A Q+Y V Y AT TQ +Y + YG+ PA +
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPA 126
Query: 640 YNQPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAYPEQ 694
Y Q PA+ AP PQ G QP Q+ + G P+ GYGQ Y +YP Q
Sbjct: 127 YGQQPAATAPTRPQD-GNKPTETSQP---QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQ 182
Query: 695 PATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAATQPSYDQSASQSTAY 750
P T+ Y Y TQ GQP Y Q Q SY Q +S Y
Sbjct: 183 PVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTY--GQPSSYGQ----QSSYGQQSS----Y 232
Query: 751 GVAQGTAAAGYGKTVSPQPG-YPQYDST 777
G T+ + S P Y Q S+
Sbjct: 233 GQQPPTSYPPQTGSYSQAPSQYSQQSSS 260
Score = 121 (47.7 bits), Expect = 0.00064, P = 0.00063
Identities = 68/248 (27%), Positives = 88/248 (35%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQ 604
S YSQ Q GY + +P G AQ TQ Y +Q +
Sbjct: 3 STDYSTYSQAAAQQGYSAYT-AQPTQGY-AQTTQAYGQQSYGTYGQPTDVSY-TQAQTTA 59
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPASAPGYPQQAGQAVPN 660
+YG + Y +G T T P S P +Y+ A+ QA A +
Sbjct: 60 TYGQTA-YATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVT--TTQASYAAQS 116
Query: 661 YPQPGGQQA-PSYGQV-APTAGYGQYTNTQQAYPEQPATSNAGY-----GYQGTQDXXXX 713
G Q A P+YGQ A TA + QP +S GY GY G +
Sbjct: 117 --AYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGY-GQSNYSYP 173
Query: 714 XXXXXXXXXXXTGQPGYAQPA--ATQP-SYDQSA-SQSTAYGVAQGTAA-AGYGKTVS-- 766
T P Y + +TQP SYDQS+ SQ YG + YG+ S
Sbjct: 174 QVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYG 233
Query: 767 --PQPGYP 772
P YP
Sbjct: 234 QQPPTSYP 241
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 67/220 (30%), Positives = 82/220 (37%)
Query: 502 NYGQPHTSEYXXXXXXXXXXXXXXXGHG-YDDNHAPV---QHPYGGHS--NSQPVYSQGG 555
+YGQP T G G YD A V Q Y S +QP Y G
Sbjct: 69 SYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYG 128
Query: 556 LQSGYHQHQYGKPPYG-MPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQ 614
Q +P G P + +QPQS Y S SY P VP
Sbjct: 129 QQPAATAPT--RPQDGNKPTETSQPQS---STGGYNQPSLGYGQ---SNYSY-PQVPGSY 179
Query: 615 QYPYATSGPTQQTYP--SYGSAPAPDSYNQPPASAP---GYPQQAGQAVPNYPQPGGQQA 669
T+ P+ YP SY S P SY+Q S G P GQ +Y GQQ+
Sbjct: 180 PMQPVTAPPS---YPPTSYSSTQ-PTSYDQSSYSQQNTYGQPSSYGQQ-SSY----GQQS 230
Query: 670 PSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQD 709
SYGQ PT+ Y T + P Q + ++ YG Q D
Sbjct: 231 -SYGQQPPTS-YPPQTGSYSQAPSQYSQQSSSYGQQRPMD 268
>UNIPROTKB|Q5ZLP8 [details] [associations]
symbol:IGF2BP3 "Insulin-like growth factor 2 mRNA-binding
protein 3" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 HSSP:Q9Y6M1 HOVERGEN:HBG052725
KO:K13197 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OrthoDB:EOG405S0T EMBL:AJ719686
IPI:IPI00594271 RefSeq:NP_001006359.1 UniGene:Gga.4039
ProteinModelPortal:Q5ZLP8 SMR:Q5ZLP8 PRIDE:Q5ZLP8
Ensembl:ENSGALT00000017840 GeneID:420617 KEGG:gga:420617 CTD:10643
InParanoid:Q5ZLP8 OMA:EAQDTKF NextBio:20823504 Uniprot:Q5ZLP8
Length = 584
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 58/194 (29%), Positives = 89/194 (45%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P A R V I G KA+
Sbjct: 416 IPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PAEG-PDAKLRMVIITGPPEAQFKAQGR 473
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + G V + IKVP+ G +IG+GG+T+ LQ +
Sbjct: 474 IYGKLKEENFFGPKEEVKL------------EAHIKVPSYAAGRVIGKGGKTVNELQNLT 521
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
A + + P D + + +V++TG ++AQ I+E+L+Q R QQ
Sbjct: 522 SAEVVVPRDQTP--DENDQVVVKITGHFYACQLAQRKIQEILAQVRR---------QQQQ 570
Query: 386 RPRVPTGPPQWGPR 399
+ + +G PQ PR
Sbjct: 571 QKTLQSGQPQ--PR 582
Score = 90 (36.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+E V + +P VG IIG+ G+ IK L +GA I++ P EG +K R+V +TG
Sbjct: 409 SETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA---EGPDAKLRMVIITG 462
Score = 85 (35.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G++ KA
Sbjct: 281 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAKA 340
Query: 263 EKLINAVIAEA 273
E+ I I E+
Sbjct: 341 EEEIMKKIRES 351
>UNIPROTKB|O57526 [details] [associations]
symbol:igf2bp3-b "Insulin-like growth factor 2 mRNA-binding
protein 3-B" species:8355 "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005783 GO:GO:0007275 GO:GO:0005634 GO:GO:0006417
GO:GO:0006355 GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003730 GO:GO:0051028 HSSP:Q9Y6M1
HOVERGEN:HBG052725 KO:K13197 EMBL:AF042353 EMBL:AF064633
EMBL:BC057700 RefSeq:NP_001079932.1 UniGene:Xl.240
ProteinModelPortal:O57526 SMR:O57526 GeneID:379623 KEGG:xla:379623
CTD:379623 Xenbase:XB-GENE-6255198 Uniprot:O57526
Length = 593
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 58/194 (29%), Positives = 88/194 (45%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P A R V I G KA+
Sbjct: 424 IPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PAEG-PDAKLRMVIITGPPEAQFKAQGR 481
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + G V + IKVP+ G +IG+GG+T+ LQ +
Sbjct: 482 IYGKLKEENFFGPKEEVKL------------EAHIKVPSYAAGRVIGKGGKTVNELQNLT 529
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
A + + P D + + +V++TG ++AQ I+E+L+Q R QQ
Sbjct: 530 SAEVVVPRDQTP--DENDQVVVKITGHFYASQLAQRKIQEILAQVRR--------QQQQQ 579
Query: 386 RPRVPTGPPQWGPR 399
+ +G PQ PR
Sbjct: 580 QKTAQSGQPQ--PR 591
Score = 90 (36.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+E V + +P VG IIG+ G+ IK L +GA I++ P EG +K R+V +TG
Sbjct: 417 SETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA---EGPDAKLRMVIITG 470
Score = 84 (34.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G++ KA
Sbjct: 289 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAKA 348
Query: 263 EKLINAVIAEA 273
E+ + I E+
Sbjct: 349 EEEVMKKIRES 359
>ASPGD|ASPL0000045500 [details] [associations]
symbol:AN10257 species:162425 "Emericella nidulans"
[GO:0010834 "telomere maintenance via telomere shortening"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:BN001307 GO:GO:0003723
EnsemblFungi:CADANIAT00008760 OMA:ESENNAE Uniprot:C8VLW6
Length = 465
Score = 136 (52.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 66/242 (27%), Positives = 102/242 (42%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+ + + +IGK G+ + ++ SGAK ++ D A R + + G + KA L
Sbjct: 114 ISSQEAATVIGKGGENVSQIRRLSGAKCTVS---DYSRGAVERILTVSGPQDAVAKAFGL 170
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + P A +TAQ+ + + +P+ +G IIG+GG I+ +Q S
Sbjct: 171 IIRTL-----NNEPLDAA---STAQSK--TYPLRLLIPHILIGSIIGKGGTRIREIQDAS 220
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
GAR+ LP S ER + + G + IA + L + + + GG AY
Sbjct: 221 GARLNASDACLPL---STERSLVILGVADAVHIATYYVAVTLVEQL--TERFGGPAASAY 275
Query: 386 RPRVPTGPPQWGPRGSHPSQPMAYDY-PQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG 444
R +G GP G+ P Y PQ P Q H P ++P Q A YG
Sbjct: 276 ATR--SG----GPAGAVPGGMQVVPYVPQ--PAGGQYGH-PDTFKRHHPGQARAGAGAYG 326
Query: 445 GP 446
P
Sbjct: 327 VP 328
Score = 62 (26.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 23/62 (37%), Positives = 27/62 (43%)
Query: 601 PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPN 660
P YG P Q PYA +GP Q T P YG+ A P +AP G A+P
Sbjct: 341 PQPMHYG--AP---QTPYAGAGPHQPT-P-YGAPQAAQPRGGPTPAAP-----VGGAMPG 388
Query: 661 YP 662
P
Sbjct: 389 QP 390
>UNIPROTKB|F1NPL3 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:AADN02008174
IPI:IPI00591502 Ensembl:ENSGALT00000021483 OMA:DLNMNLS
ArrayExpress:F1NPL3 Uniprot:F1NPL3
Length = 356
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 55/195 (28%), Positives = 92/195 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 12 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPE-----RIVTITGPTDA 66
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A+ E D S + T++ V VP + G +IG+GG I
Sbjct: 67 IFKAFSMI-ALKFEEDINAS---MTNSTVTSKPPVTLRLV---VPASQCGSLIGKGGSKI 119
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER V ++G I + I V+ + S G
Sbjct: 120 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLEVSEHSPPKG 176
Query: 379 GFNQQAYRPRVPTGP 393
YRP+ + P
Sbjct: 177 A--TIPYRPKPASAP 189
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T S ++ +PN+ +G +IG+ G I ++ SGA+I+I A+A +A R V I G+ +N
Sbjct: 279 TSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI---ANATEGSAERQVTITGSPAN 335
Query: 259 IDKAEKLINAVIAEADAG 276
I A+ LINA ++ G
Sbjct: 336 ISLAQYLINARLSSEVTG 353
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 279 PSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPE 338
PS+ GL A+ E+ +PN+ +G IIGR G I ++ SGA+I++
Sbjct: 266 PSVPHIGL---DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANAT--- 319
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
+GS ER V +TG I +AQ +I LS V
Sbjct: 320 -EGSAERQVTITGSPANISLAQYLINARLSSEV 351
>UNIPROTKB|B0QYK0 [details] [associations]
symbol:EWSR1 "RNA-binding protein EWS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 EMBL:AC002059
EMBL:AL031186 EMBL:AC000026 UniGene:Hs.374477 HGNC:HGNC:3508
HOGENOM:HOG000038010 HOVERGEN:HBG000970 ChiTaRS:EWSR1
IPI:IPI00879242 SMR:B0QYK0 STRING:B0QYK0 Ensembl:ENST00000331029
Uniprot:B0QYK0
Length = 618
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 72/268 (26%), Positives = 96/268 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQTTATYGQTAY 66
Query: 593 XXXYQSQ-----VPSA-QSYGPNVPHQQQYPY----ATSGPTQQTYPS---YGSAPAPDS 639
Y P+A Q+Y V Y AT TQ +Y + YG+ PA +
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPA 126
Query: 640 YNQPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAYPEQ 694
Y Q PA+ AP PQ G QP Q+ + G P+ GYGQ Y +YP Q
Sbjct: 127 YGQQPAATAPTRPQD-GNKPTETSQP---QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQ 182
Query: 695 PATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYDQSASQST 748
P T+ Y Y TQ GQP Y Q ++ Q SY Q T
Sbjct: 183 PVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYGQQPP--T 238
Query: 749 AYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
+Y G+ + + Y Q S
Sbjct: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSS 266
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 64/212 (30%), Positives = 83/212 (39%)
Query: 502 NYGQPHTSEYXXXXXXXXXXXXXXXGHG-YDDNHAPV---QHPYGGHS--NSQPVYSQGG 555
+YGQP T G G YD A V Q Y S +QP Y G
Sbjct: 69 SYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYG 128
Query: 556 LQSGYHQHQYGKPPYG-MPAQGTQPQS----YXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Q +P G P + +QPQS Y Y QVP + P V
Sbjct: 129 QQPAATAPT--RPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYP-QVPGSYPMQP-V 184
Query: 611 PHQQQYP---YATSGPT---QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP-NYP- 662
YP Y+++ PT Q +Y + P SY Q S+ G GQ P +YP
Sbjct: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQ--SSYGQQSSYGQQPPTSYPP 242
Query: 663 QPGG-QQAPS-YGQVAPTAGYGQYTNTQQAYP 692
Q G QAPS Y Q ++ YGQ ++ +Q +P
Sbjct: 243 QTGSYSQAPSQYSQ--QSSSYGQQSSFRQDHP 272
Score = 121 (47.7 bits), Expect = 0.00069, P = 0.00069
Identities = 68/248 (27%), Positives = 88/248 (35%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQ 604
S YSQ Q GY + +P G AQ TQ Y +Q +
Sbjct: 3 STDYSTYSQAAAQQGYSAYT-AQPTQGY-AQTTQAYGQQSYGTYGQPTDVSY-TQAQTTA 59
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPASAPGYPQQAGQAVPN 660
+YG + Y +G T T P S P +Y+ A+ QA A +
Sbjct: 60 TYGQTA-YATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVT--TTQASYAAQS 116
Query: 661 YPQPGGQQA-PSYGQV-APTAGYGQYTNTQQAYPEQPATSNAGY-----GYQGTQDXXXX 713
G Q A P+YGQ A TA + QP +S GY GY G +
Sbjct: 117 --AYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGY-GQSNYSYP 173
Query: 714 XXXXXXXXXXXTGQPGYAQPA--ATQP-SYDQSA-SQSTAYGVAQGTAA-AGYGKTVS-- 766
T P Y + +TQP SYDQS+ SQ YG + YG+ S
Sbjct: 174 QVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYG 233
Query: 767 --PQPGYP 772
P YP
Sbjct: 234 QQPPTSYP 241
>WB|WBGene00003978 [details] [associations]
symbol:pes-4 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 EMBL:FO081827 GeneTree:ENSGT00550000074311
eggNOG:NOG315872 RefSeq:NP_497351.3 ProteinModelPortal:Q95Y67
SMR:Q95Y67 PaxDb:Q95Y67 EnsemblMetazoa:Y119D3B.17 GeneID:175288
KEGG:cel:CELE_Y119D3B.17 UCSC:Y119D3B.17 CTD:175288
WormBase:Y119D3B.17 HOGENOM:HOG000020666 InParanoid:Q95Y67
OMA:PHSTERA NextBio:887534 Uniprot:Q95Y67
Length = 432
Score = 157 (60.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 59/193 (30%), Positives = 93/193 (48%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ + +VG +IGK GD I+ ++ SGAKI I+ D R V I GTL I KA
Sbjct: 75 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINIS-----DGSCPERIVTITGTLGVIGKA 129
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
++ E D P+ V + T + + VP + G +IG+GG IK ++
Sbjct: 130 FNMVCNKFEE-DMLLLPNSVPKPPIT---------MRVIVPATQCGSLIGKGGSKIKDIR 179
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSGGFN 381
+GA IQ+ + LP S ER V ++G I + + ++L + + ST++
Sbjct: 180 EATGASIQVASEMLPH---STERAVTLSGTADAINLCMTQVCQILLEAPPKGSTIT---- 232
Query: 382 QQAYRPRVPTGPP 394
YRP+ PT P
Sbjct: 233 ---YRPK-PTFNP 241
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ ++ VP + G LIGK G I+ ++ +GA IQ+ ++ PH+ R V + GT I
Sbjct: 153 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVA--SEMLPHSTERAVTLSGTADAI 210
Query: 260 DKAEKLINAVIAEADAGGS-------PSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
+ + ++ EA GS P+ +AT+ A+ AA+Q + + + +
Sbjct: 211 NLCMTQVCQILLEAPPKGSTITYRPKPTFNPLAIATSAATIAAQQQQAQAQQQLAAAALM 270
Query: 313 RGGETIKGLQTR-SGARIQ-----LIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI--K 364
GG+ ++ Q + A +Q + Q L + + + G +Q AQE+ +
Sbjct: 271 GGGQGVQVQQQLVTNALLQQHQFAAVQQELAARAALFNQQLMMPGQQQQASQAQEVYLGQ 330
Query: 365 EVLSQTVRPSTLSGGFNQQAYRP-RVPTGPPQW 396
L T L G N +A QW
Sbjct: 331 HGLIYTANGVQLGGQDNSKAMEAGAAAAAAAQW 363
Score = 38 (18.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 597 QSQVPSAQSYGPNVPHQQQYPYATSGPTQQ-TYPSYGSAPAPDS--YNQPPASAPGYPQQ 653
Q Q+ +A G Q Q T+ QQ + + A + +NQ PG QQ
Sbjct: 261 QQQLAAAALMGGGQGVQVQQQLVTNALLQQHQFAAVQQELAARAALFNQQ-LMMPGQQQQ 319
Query: 654 AGQAVPNY 661
A QA Y
Sbjct: 320 ASQAQEVY 327
>ASPGD|ASPL0000056792 [details] [associations]
symbol:AN1325 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] EMBL:BN001308
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF14438
eggNOG:COG5180 EMBL:AACD01000018 RefSeq:XP_658929.1
ProteinModelPortal:Q5BDQ5 EnsemblFungi:CADANIAT00001288
GeneID:2877101 KEGG:ani:AN1325.2 HOGENOM:HOG000208317 OMA:FANNERI
OrthoDB:EOG47DDQN Uniprot:Q5BDQ5
Length = 1027
Score = 127 (49.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 53/173 (30%), Positives = 62/173 (35%)
Query: 528 HGYDDNHAP-VQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXX 586
HGY AP Q YG Q +QG Q + +H G PP+ P QG
Sbjct: 818 HGYPSPMAPHAQLAYGQQPMPQFFVNQGAPQPAHMRHYQGAPPFVNP-QGAMAAPIMVQQ 876
Query: 587 XXXXXXXXXYQSQ-VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPA 645
Q+ P Q Y P+ H YP+ YPS S AP +Q
Sbjct: 877 PSGGPYMGVPQAPFTPQMQMYSPSPAHA--YPHVPPPQPHGGYPS-PSRGAPMMMHQN-- 931
Query: 646 SAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAP---TAGYGQYTNTQQAYPEQP 695
S PG QA Q V P PG Q P Y P G G Y Q + P
Sbjct: 932 SQPG---QAPQHVMYMP-PGQHQQPVYAGQQPGHLPPGRGNYPQQQPHFQSSP 980
Score = 73 (30.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 25/60 (41%), Positives = 30/60 (50%)
Query: 350 TGDMRQIEIAQE--MIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPM 407
T D Q+ + QE SQT RP+ G +Q Y P PTGP Q GP G P QP+
Sbjct: 511 TADQAQLPVRQEGGATAAQPSQTDRPAYPRG---RQGY-P--PTGP-QGGPAGRAPHQPL 563
Score = 67 (28.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 31/98 (31%), Positives = 39/98 (39%)
Query: 355 QIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTG--PPQWGPRGSHPSQ-PMAYDY 411
Q + M KE QT R + +GG AY +PT S+ ++
Sbjct: 686 QFNPIKRMKKESAEQTDRDYSSNGGI-PFAYST-LPTWNIATNGDEEKSYVQMFKSSHTS 743
Query: 412 PQ-RGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPPN 448
PQ R Q PH PHLPY M P S GPP+
Sbjct: 744 PQSRSASNPQIPHQPHLPYQFQQAPTMPPTS---GPPH 778
Score = 64 (27.6 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 28/76 (36%), Positives = 36/76 (47%)
Query: 382 QQAYRPRVP--TGPPQWG---PRGSHPSQPMAYDYPQRGPYP-SQNPHYP--HLPYGNYP 433
QQA P +P +GPP P+ H S P +D P R SQ+ +P L +G YP
Sbjct: 765 QQA--PTMPPTSGPPHGPHLHPQQHHGSGPPHFDDPHRMQMSASQSQMFPSPRLQHG-YP 821
Query: 434 PQQMAPRSN--YGGPP 447
MAP + YG P
Sbjct: 822 -SPMAPHAQLAYGQQP 836
Score = 51 (23.0 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 403 PSQP-MAYDYPQRGPYP--SQNPHYPHL-P---YGNYPP 434
P QP + Y + Q P S PH PHL P +G+ PP
Sbjct: 755 PHQPHLPYQFQQAPTMPPTSGPPHGPHLHPQQHHGSGPP 793
Score = 38 (18.4 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 41 AKNSDEVEKNVDGFAEAHGSEVKRPRLDDDKTEKPDGP 78
A N DE + V F +H S R + +P P
Sbjct: 724 ATNGDEEKSYVQMFKSSHTSPQSRSASNPQIPHQPHLP 761
>UNIPROTKB|Q01844 [details] [associations]
symbol:EWSR1 "RNA-binding protein EWS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50096 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0046872 EMBL:CH471095 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 EMBL:AC002059 MIM:612160 Orphanet:97338
Pathway_Interaction_DB:bard1pathway eggNOG:NOG240581 EMBL:AL031186
MIM:612219 Orphanet:319 EMBL:X66899 EMBL:X72990 EMBL:X72991
EMBL:X72992 EMBL:X72993 EMBL:X72994 EMBL:X72995 EMBL:X72996
EMBL:X72997 EMBL:X72998 EMBL:X72999 EMBL:X73000 EMBL:X73001
EMBL:X73002 EMBL:X73003 EMBL:X73004 EMBL:Y07848 EMBL:CR456490
EMBL:AK056309 EMBL:AK056681 EMBL:AC000026 EMBL:BC000527
EMBL:BC004817 EMBL:BC011048 EMBL:BC072442 EMBL:Y08806 EMBL:AB016435
IPI:IPI00065554 IPI:IPI00293254 IPI:IPI00335961 IPI:IPI00872855
IPI:IPI00879259 PIR:A49358 RefSeq:NP_001156757.1
RefSeq:NP_001156759.1 RefSeq:NP_005234.1 RefSeq:NP_053733.2
UniGene:Hs.374477 PDB:2CPE PDBsum:2CPE ProteinModelPortal:Q01844
SMR:Q01844 IntAct:Q01844 MINT:MINT-2858561 STRING:Q01844
PhosphoSite:Q01844 DMDM:544261 PaxDb:Q01844 PRIDE:Q01844 DNASU:2130
Ensembl:ENST00000332035 Ensembl:ENST00000333395
Ensembl:ENST00000397938 Ensembl:ENST00000406548
Ensembl:ENST00000414183 GeneID:2130 KEGG:hsa:2130 UCSC:uc003aet.3
CTD:2130 GeneCards:GC22P029663 HGNC:HGNC:3508 HPA:CAB004230
MIM:133450 neXtProt:NX_Q01844 Orphanet:83469 PharmGKB:PA27921
HOGENOM:HOG000038010 HOVERGEN:HBG000970 KO:K13209 OMA:EGTSTGY
OrthoDB:EOG42NJ15 PhylomeDB:Q01844 ChiTaRS:EWSR1
EvolutionaryTrace:Q01844 GenomeRNAi:2130 NextBio:8605
ArrayExpress:Q01844 Bgee:Q01844 CleanEx:HS_EWSR1
Genevestigator:Q01844 GermOnline:ENSG00000182944 Uniprot:Q01844
Length = 656
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 72/268 (26%), Positives = 96/268 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQTTATYGQTAY 66
Query: 593 XXXYQSQ-----VPSA-QSYGPNVPHQQQYPY----ATSGPTQQTYPS---YGSAPAPDS 639
Y P+A Q+Y V Y AT TQ +Y + YG+ PA +
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPA 126
Query: 640 YNQPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAYPEQ 694
Y Q PA+ AP PQ G QP Q+ + G P+ GYGQ Y +YP Q
Sbjct: 127 YGQQPAATAPTRPQD-GNKPTETSQP---QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQ 182
Query: 695 PATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYDQSASQST 748
P T+ Y Y TQ GQP Y Q ++ Q SY Q T
Sbjct: 183 PVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYGQQPP--T 238
Query: 749 AYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
+Y G+ + + Y Q S
Sbjct: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSS 266
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 64/212 (30%), Positives = 83/212 (39%)
Query: 502 NYGQPHTSEYXXXXXXXXXXXXXXXGHG-YDDNHAPV---QHPYGGHS--NSQPVYSQGG 555
+YGQP T G G YD A V Q Y S +QP Y G
Sbjct: 69 SYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYG 128
Query: 556 LQSGYHQHQYGKPPYG-MPAQGTQPQS----YXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Q +P G P + +QPQS Y Y QVP + P V
Sbjct: 129 QQPAATAPT--RPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYP-QVPGSYPMQP-V 184
Query: 611 PHQQQYP---YATSGPT---QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP-NYP- 662
YP Y+++ PT Q +Y + P SY Q S+ G GQ P +YP
Sbjct: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQ--SSYGQQSSYGQQPPTSYPP 242
Query: 663 QPGG-QQAPS-YGQVAPTAGYGQYTNTQQAYP 692
Q G QAPS Y Q ++ YGQ ++ +Q +P
Sbjct: 243 QTGSYSQAPSQYSQ--QSSSYGQQSSFRQDHP 272
Score = 121 (47.7 bits), Expect = 0.00075, P = 0.00075
Identities = 68/248 (27%), Positives = 88/248 (35%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQ 604
S YSQ Q GY + +P G AQ TQ Y +Q +
Sbjct: 3 STDYSTYSQAAAQQGYSAYT-AQPTQGY-AQTTQAYGQQSYGTYGQPTDVSY-TQAQTTA 59
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPASAPGYPQQAGQAVPN 660
+YG + Y +G T T P S P +Y+ A+ QA A +
Sbjct: 60 TYGQTA-YATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVT--TTQASYAAQS 116
Query: 661 YPQPGGQQA-PSYGQV-APTAGYGQYTNTQQAYPEQPATSNAGY-----GYQGTQDXXXX 713
G Q A P+YGQ A TA + QP +S GY GY G +
Sbjct: 117 --AYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGY-GQSNYSYP 173
Query: 714 XXXXXXXXXXXTGQPGYAQPA--ATQP-SYDQSA-SQSTAYGVAQGTAA-AGYGKTVS-- 766
T P Y + +TQP SYDQS+ SQ YG + YG+ S
Sbjct: 174 QVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYG 233
Query: 767 --PQPGYP 772
P YP
Sbjct: 234 QQPPTSYP 241
>ZFIN|ZDB-GENE-050706-149 [details] [associations]
symbol:zgc:110045 "zgc:110045" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-050706-149
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:CR759794
eggNOG:NOG315872 HOGENOM:HOG000182823 HOVERGEN:HBG053520
OrthoDB:EOG46WZ8K EMBL:BC098540 IPI:IPI00629204
RefSeq:NP_001035073.1 UniGene:Dr.87947 SMR:Q4KMJ2
Ensembl:ENSDART00000079745 GeneID:664755 KEGG:dre:664755
OMA:QSCARIT NextBio:20902333 Uniprot:Q4KMJ2
Length = 222
Score = 142 (55.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/201 (27%), Positives = 96/201 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ D + R V I G
Sbjct: 16 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----DGSSPERIVTITGASEV 70
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA A+IAE ++A + + S + + P + G +IG+GG I
Sbjct: 71 IFKAF----AMIAEKF---EEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKI 123
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ------TV- 371
K ++ +GA++Q+ LP+ S ER V ++G I + I V+ + T+
Sbjct: 124 KEIRESTGAQVQVAGDLLPD---STERAVTISGTPHAITQCVKHICTVMLESPPKGATIP 180
Query: 372 -RPSTLSGGFNQQAYRPRVPT 391
RP +GG + +P T
Sbjct: 181 YRPKPSAGGGHTVLTQPHAAT 201
>UNIPROTKB|A8E651 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0005634 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 CTD:2130 HOGENOM:HOG000038010
HOVERGEN:HBG000970 KO:K13209 OMA:EGTSTGY OrthoDB:EOG42NJ15
EMBL:DAAA02045602 EMBL:BC153844 IPI:IPI00871084
RefSeq:NP_001103270.1 UniGene:Bt.33949 SMR:A8E651 STRING:A8E651
Ensembl:ENSBTAT00000023612 GeneID:534073 KEGG:bta:534073
InParanoid:A8E651 NextBio:20876260 Uniprot:A8E651
Length = 655
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 71/268 (26%), Positives = 96/268 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQTTATYGQTAY 66
Query: 593 XXXYQS-----QVPSA-QSYGPNVPHQQQYPY----ATSGPTQQTYPS---YGSAPAPDS 639
Y P+A Q+Y V Y AT TQ +Y + YG+ PA +
Sbjct: 67 ATSYGQPPTGYSTPAAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPA 126
Query: 640 YNQPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAYPEQ 694
Y Q PA+ AP PQ G QP Q+ + G P+ GYGQ Y +YP Q
Sbjct: 127 YGQQPAATAPARPQD-GNKPAETSQP---QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQ 182
Query: 695 PATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYDQSASQST 748
P ++ Y Y TQ GQP Y Q ++ Q SY Q T
Sbjct: 183 PVSAPPSYPPTSYSSTQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYGQQPP--T 238
Query: 749 AYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
+Y G+ + + Y Q S
Sbjct: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSS 266
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 68/252 (26%), Positives = 86/252 (34%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQ 604
S YSQ Q GY + +P G AQ TQ Y +Q +
Sbjct: 3 STDYSTYSQAAAQQGYSAYT-AQPTQGY-AQTTQAYGQQSYGTYGQPTDVSY-TQAQTTA 59
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPAS--APGYPQQAGQAVPNYP 662
+YG Q YATS T Y + AP +Y+QP Y
Sbjct: 60 TYG-------QTAYATSYGQPPT--GYSTPAAPQAYSQPVQGYGTGAYDTTTATVTTTQA 110
Query: 663 QPGGQQA-------PSYGQV-APTAGYGQYTNTQQAYPEQPATSNAGY-----GYQGTQD 709
Q A P+YGQ A TA + A QP +S GY GY G +
Sbjct: 111 SYAAQSAYGTQPAYPAYGQQPAATAPARPQDGNKPAETSQPQSSTGGYNQPSLGY-GQSN 169
Query: 710 XXXXXXXXXXXXXXXTGQPGYAQPA--ATQP-SYDQSA-SQSTAYGVAQGTAA-AGYGKT 764
+ P Y + +TQP SYDQS+ SQ YG + YG+
Sbjct: 170 YSYPQVPGSYPMQPVSAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQ 229
Query: 765 VS----PQPGYP 772
S P YP
Sbjct: 230 SSYGQQPPTSYP 241
>MGI|MGI:99960 [details] [associations]
symbol:Ewsr1 "Ewing sarcoma breakpoint region 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015030 "Cajal body" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50096
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
MGI:MGI:99960 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0046872 EMBL:CH466574
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 CTD:2130
HOVERGEN:HBG000970 KO:K13209 OrthoDB:EOG42NJ15 EMBL:X79233
EMBL:AK019460 EMBL:AK151625 EMBL:AL645845 IPI:IPI00742310
PIR:A55726 RefSeq:NP_031994.2 UniGene:Mm.142822
ProteinModelPortal:Q61545 SMR:Q61545 IntAct:Q61545 STRING:Q61545
PhosphoSite:Q61545 PaxDb:Q61545 PRIDE:Q61545
Ensembl:ENSMUST00000079949 GeneID:14030 KEGG:mmu:14030
NextBio:284964 Bgee:Q61545 CleanEx:MM_EWSR1 Genevestigator:Q61545
GermOnline:ENSMUSG00000009079 Uniprot:Q61545
Length = 655
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 72/270 (26%), Positives = 96/270 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQTTATYGQTAY 66
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYP---Y---------ATSGPTQQTYPS---YGSAPAP 637
Y Q P+ S P P P Y AT TQ +Y + YG+ PA
Sbjct: 67 ATSY-GQPPTGYST-PTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAY 124
Query: 638 DSYNQPP-ASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAYP 692
+Y Q P A+AP PQ G QP Q+ + G P+ GYGQ Y +YP
Sbjct: 125 PTYGQQPTATAPTRPQD-GNKPAETSQP---QSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Query: 693 EQPATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYDQSASQ 746
QP T+ Y Y +Q GQP Y Q ++ Q SY Q
Sbjct: 181 MQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYGQQPP- 237
Query: 747 STAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
T+Y G+ + + Y Q S
Sbjct: 238 -TSYPPQTGSYSQAPSQYSQQSSSYGQQSS 266
>ZFIN|ZDB-GENE-030131-4867 [details] [associations]
symbol:ss18 "synovial sarcoma translocation,
chromosome 18 (H. sapiens)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] ZFIN:ZDB-GENE-030131-4867
GeneTree:ENSGT00500000044808 HOGENOM:HOG000048717
HOVERGEN:HBG003892 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 CTD:6760 eggNOG:NOG274014 KO:K15623 OrthoDB:EOG4RFKTH
EMBL:FP101911 EMBL:BC047188 IPI:IPI00491300 RefSeq:NP_956038.1
UniGene:Dr.20155 Ensembl:ENSDART00000011919 GeneID:326668
KEGG:dre:326668 InParanoid:Q802V1 NextBio:20809677 Uniprot:Q802V1
Length = 368
Score = 134 (52.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 57/173 (32%), Positives = 63/173 (36%)
Query: 538 QHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
QH Y G N + QG G Q PPY P QG PQ Y
Sbjct: 217 QH-YQGQQNPMGMMGQGNHVMG----QRPMPPYRPPHQGP-PQQYPGQDEYYTEQYSHGG 270
Query: 598 SQVPSAQS-YGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY-PQQ-A 654
P + YG QQQ Y P QQ YP Y P GY P Q A
Sbjct: 271 QGAPEGNTQYG-----QQQEAYQQGPPQQQGYPPQQQYSGQQGY---PGQQQGYGPSQGA 322
Query: 655 GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG-YG-YQ 705
PNYPQ GQQ +Y AP G Q P++P + G YG YQ
Sbjct: 323 PSQYPNYPQSQGQQYSAYR--APQPG------PPQGQPQRPYAFDQGQYGNYQ 367
Score = 59 (25.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 21/69 (30%), Positives = 24/69 (34%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYP-PQQMAP 439
N Q+ P PT G+ P P + P GP PH G P P M
Sbjct: 70 NMQSLLPAPPTQNMPMNQSGATPQLPHGHSMPSEGPTA---PHMQSQMNGQMPGPNHM-- 124
Query: 440 RSNYGGPPN 448
S G PN
Sbjct: 125 -SMQGPGPN 132
Score = 44 (20.5 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 19/61 (31%), Positives = 22/61 (36%)
Query: 392 GPPQWG--PRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP-YGNYPPQQMAPRSNYGGPPN 448
GP Q P GS P ++ G Y P + G Q P NYG PN
Sbjct: 130 GPNQSSSIPSGSMNIPPSSHG--SMGAYNHAVPSSQGIQSQGQMNINQGQPMGNYGPRPN 187
Query: 449 M 449
M
Sbjct: 188 M 188
>UNIPROTKB|A5D7A1 [details] [associations]
symbol:SS18 "SS18 protein" species:9913 "Bos taurus"
[GO:0048013 "ephrin receptor signaling pathway" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] GO:GO:0000226 GO:GO:0042493
GO:GO:0045944 GO:GO:0007243 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
HOGENOM:HOG000048717 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 CTD:6760 eggNOG:NOG274014 KO:K15623
OrthoDB:EOG4RFKTH OMA:IQCIMDS EMBL:DAAA02056547 EMBL:BC140481
IPI:IPI00852562 RefSeq:NP_001091591.1 UniGene:Bt.41790
Ensembl:ENSBTAT00000015327 GeneID:540947 KEGG:bta:540947
InParanoid:A5D7A1 NextBio:20878926 Uniprot:A5D7A1
Length = 386
Score = 134 (52.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 57/173 (32%), Positives = 62/173 (35%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQ--HQYGK---PPYGMPAQGTQPQSYXXXXXXXXXXXX 594
P GG + Q G+ S +Q H G+ PPY P QG PQ Y
Sbjct: 218 PQGGGQHYQGQQPPMGMMSQVNQGNHMLGQRQIPPYRPPQQGP-PQQYSGQEDYYGEQYS 276
Query: 595 XYQSQVPSA--QSYGP--NVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY 650
P Q Y P N + QQ P QQ YP P Y P GY
Sbjct: 277 HGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQYPGQQGY---PGQQQGY 333
Query: 651 -PQQAGQA--VPNYPQPGGQQAPSY--GQVAPTA-------GY--GQYTNTQQ 689
P Q G PNYPQ GQQ Y Q P GY GQY N QQ
Sbjct: 334 GPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ 386
Score = 118 (46.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 60/192 (31%), Positives = 68/192 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGK-PPYGMPAQGTQPQSYXXXXXXXXX 591
N PV H QP Q + G QH G+ PP GM +Q Q
Sbjct: 201 NQGPVMH-------QQPPSQQYNMPQGGGQHYQGQQPPMGMMSQVNQGNHMLGQRQIPPY 253
Query: 592 XXXXYQSQVPSAQSYGPNVPHQQQYPYATSGP----TQQTYPSYGS--APAPDSYNQPPA 645
Q P Q G + +QY + GP QQ YP S D+Y PP
Sbjct: 254 RP---PQQGPPQQYSGQEDYYGEQYSHGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPP 310
Query: 646 SAPGYPQQAGQAVPNYP-QPGGQQA--PSYGQVAPT-----AGYGQ-YTNTQQAYPEQPA 696
GYP Q Q P PG QQ PS G P G GQ Y + A P P
Sbjct: 311 QQ-GYPPQ--QQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQ 367
Query: 697 T-SNAGYGY-QG 706
YGY QG
Sbjct: 368 PPQQRPYGYDQG 379
Score = 106 (42.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 60/213 (28%), Positives = 73/213 (34%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYG-KPPYGM-PAQGT--QPQSYXXXXXXXXXXXXXYQSQV 600
S S PV +Q + G YG +P M P QG Q YQ Q
Sbjct: 170 SQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPVMHQQPPSQQYNMPQGGGQHYQGQQ 229
Query: 601 P-----SAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPA-SAPGYPQQA 654
P S + G ++ Q+Q P P QQ P S D Y + + G P+
Sbjct: 230 PPMGMMSQVNQGNHMLGQRQIP--PYRPPQQGPPQQYSGQE-DYYGEQYSHGGQGPPEGM 286
Query: 655 GQAV-PNYPQPGGQQAPSYGQVAPTAGYG---QYTNTQQAYPEQPATSNAGYGYQGTQDX 710
Q P+ GQQ +Y P GY QY QQ YP Q G G Q
Sbjct: 287 NQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQYPG-QQGYPGQQQGYGPSQGGPGPQYP 345
Query: 711 XXXXXXXXXXXXXXTGQPGYAQPAATQP-SYDQ 742
QPG QP +P YDQ
Sbjct: 346 NYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQ 378
Score = 102 (41.0 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 64/245 (26%), Positives = 78/245 (31%)
Query: 554 GGLQSGYHQHQY-GK-P-PYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
GG + + Q+Q G+ P P +P QG P + S Y +V
Sbjct: 112 GGPPAPHMQNQMNGQMPGPNHIPMQGPGPNQLNMTNSSMNMPSSSHGSM----GGYNHSV 167
Query: 611 PHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ--- 667
P Q P Q P P P+ QP P QQ N PQ GGQ
Sbjct: 168 PSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPN-QGPVMHQQPPSQQYNMPQGGGQHYQ 226
Query: 668 -QAPSYGQVAPT-AG---YGQ-----YTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
Q P G ++ G GQ Y QQ P+Q + YG Q +
Sbjct: 227 GQQPPMGMMSQVNQGNHMLGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGPPEGM 286
Query: 718 XXXXX-XXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA--GYGKTVS-PQPGYPQ 773
Q G Q A P Q Y QG GYG + P P YP
Sbjct: 287 NQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQYPGQQGYPGQQQGYGPSQGGPGPQYPN 346
Query: 774 YDSTQ 778
Y Q
Sbjct: 347 YPQGQ 351
Score = 59 (25.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 24/73 (32%), Positives = 29/73 (39%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPS----QPMAYDYPQRG------PYPS-QNPHYPHLPY 429
N Q+ P PT GP G PS P A++ P G P P QN +P
Sbjct: 70 NMQSLLPAPPTQNMPMGPGGMSPSGPPPPPRAHNMPSDGMVGGGPPAPHMQNQMNGQMPG 129
Query: 430 GNYPPQQMAPRSN 442
N+ P Q P N
Sbjct: 130 PNHIPMQ-GPGPN 141
Score = 58 (25.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 35/141 (24%), Positives = 56/141 (39%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 109 MVG-GGPPAPHMQNQMNGQMPG-PNHIPMQGPGPNQ--LNMTNSSMNMPSSSHGSMGGYN 164
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPH- 426
+V PS+ S NQ P G +GPR + QP + P PSQ + P
Sbjct: 165 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPRPNMSMQPNQGPVMHQQP-PSQQYNMPQG 220
Query: 427 --LPY-GNYPPQQMAPRSNYG 444
Y G PP M + N G
Sbjct: 221 GGQHYQGQQPPMGMMSQVNQG 241
Score = 57 (25.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 19/64 (29%), Positives = 23/64 (35%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNYGG 445
P GP Q S + P + + G Y P +P N Q P NYG
Sbjct: 134 PMQGPGPNQLNMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGP 192
Query: 446 PPNM 449
PNM
Sbjct: 193 RPNM 196
>ASPGD|ASPL0000075803 [details] [associations]
symbol:AN4546 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0043409 "negative regulation of MAPK cascade"
evidence=IEA] [GO:0048255 "mRNA stabilization" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4Z65XM eggNOG:NOG315872 HOGENOM:HOG000184255
RefSeq:XP_662150.1 ProteinModelPortal:Q5B4I4
EnsemblFungi:CADANIAT00005892 GeneID:2872347 KEGG:ani:AN4546.2
OMA:AQANEKA Uniprot:Q5B4I4
Length = 542
Score = 154 (59.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 59/203 (29%), Positives = 95/203 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
V + + GV+IGKAG + L+ +G K +++ P R + + G LS +A L
Sbjct: 233 VSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVV---PGVHDRVLTVTGALSGTARAYAL 289
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+ + E G+P + G+ ++ + + + + ++G IIGR G IK +Q S
Sbjct: 290 VAKGLLE----GAPQM---GMGGIVSNNGTHPIRLLISHNQMGTIIGRQGLKIKHIQDAS 342
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAY 385
G R+ + LP+ S ERIV V G IE A I + L + T + +N A
Sbjct: 343 GVRMVAQKEMLPQ---STERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTILYNP-AV 398
Query: 386 RPRVPTGPPQW--GPRGSHPSQP 406
R V +G Q G S+ S+P
Sbjct: 399 RSSVGSGSIQHNGGNSDSYNSRP 421
Score = 99 (39.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 33/101 (32%), Positives = 48/101 (47%)
Query: 278 SPSLVARGLATAQASGAAEQVE-IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHL 336
+P RG G Q + I +P + VG IIGRGG I ++ SGARI +
Sbjct: 443 NPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA-- 500
Query: 337 PEGDGSKERIVRVTGDMRQIEIAQEMIKEVL-SQTVRPSTL 376
P D + ER+ + G + E A ++ E L ++ R S L
Sbjct: 501 PH-DETGERMFTIMGSAQANEKALYLLYENLEAEKTRRSQL 540
Score = 82 (33.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ + +N++G +IG+ G I+++Q SG +++ + P + R VE+ GT I+KA
Sbjct: 316 RLLISHNQMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLPQSTERIVEVQGTPEGIEKA 373
Score = 42 (19.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 739 SYDQSASQSTAYGVAQGTAAAGYGKTVSPQP---GYP 772
SY+ T G + GYG+ +P GYP
Sbjct: 416 SYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYP 452
>ZFIN|ZDB-GENE-060929-1258 [details] [associations]
symbol:igf2bp1 "insulin-like growth factor 2 mRNA
binding protein 1" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=ISS] [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322
SMART:SM00360 ZFIN:ZDB-GENE-060929-1258 GO:GO:0005634 GO:GO:0006417
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0070937
HOVERGEN:HBG052725 CTD:10642 eggNOG:NOG249985 HOGENOM:HOG000000675
OrthoDB:EOG405S0T EMBL:BC124196 IPI:IPI00800578
RefSeq:NP_001070027.1 UniGene:Dr.81351 ProteinModelPortal:Q08CK7
SMR:Q08CK7 PRIDE:Q08CK7 GeneID:558182 KEGG:dre:558182
InParanoid:Q08CK7 NextBio:20882359 Uniprot:Q08CK7
Length = 598
Score = 151 (58.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 59/195 (30%), Positives = 89/195 (45%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG LIGK G I+ L +GA I+I A+A P + R V + G KA+
Sbjct: 412 VYIPAQAVGALIGKKGQHIKQLSRFAGASIKIA-PAEA-PDSKMRMVIVTGPPEAQFKAQ 469
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
I + E + G V L T IKV G +IG+GG+T+ LQ
Sbjct: 470 GRIYGKLKEENFFGPKEEVK--LET----------HIKVAAAAAGRVIGKGGKTVNELQN 517
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ- 382
+ A + + + P D + IV++ G ++AQ I+++L+Q V+ GG
Sbjct: 518 LTAAEVVVPREQTP--DEHDQVIVKIIGHFYASQLAQRKIRDILTQ-VKQQQKGGGMGTP 574
Query: 383 QAYRPRVPT--GPPQ 395
Q P+ T G PQ
Sbjct: 575 QGPHPQGMTELGSPQ 589
Score = 104 (41.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 293 GAAEQ--VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVT 350
GA+EQ V + +P + VG +IG+ G+ IK L +GA I++ P P+ SK R+V VT
Sbjct: 403 GASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPD---SKMRMVIVT 459
Query: 351 G 351
G
Sbjct: 460 G 460
Score = 75 (31.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ NN VG LIGK G ++ ++ ++ KI I+ D + R + + G++ A
Sbjct: 283 KVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEACCLA 342
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 343 EQEIMKKVREA 353
>ZFIN|ZDB-GENE-050522-157 [details] [associations]
symbol:pcbp3 "poly(rC) binding protein 3"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-050522-157 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:BX247868 HOVERGEN:HBG053520 IPI:IPI00868273 UniGene:Dr.159961
SMR:A8WHQ1 Ensembl:ENSDART00000148317 Uniprot:A8WHQ1
Length = 350
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 59/211 (27%), Positives = 100/211 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 69
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 70 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 122
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 123 KEMRESTGAQVQVAGDMLPN---STERAVTISGTPEAIIQCVKQICVVMLESPPKGATIP 179
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMA 408
YRP+ P P G + P+A
Sbjct: 180 -------YRPK-PASTPVIFSGGQVRADPLA 202
>UNIPROTKB|H9L011 [details] [associations]
symbol:LOC426023 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:AADN02056329 Ensembl:ENSGALT00000021744 OMA:RALENKI
Uniprot:H9L011
Length = 195
Score = 136 (52.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 51/196 (26%), Positives = 98/196 (50%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER + + G + I E +++ +L + T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 378 GGFNQQAYRPRVPTGP 393
YRP+ + P
Sbjct: 178 -------YRPKPSSSP 186
>ZFIN|ZDB-GENE-030131-563 [details] [associations]
symbol:pcbp2 "poly(rC) binding protein 2"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-030131-563 GO:GO:0003723 GeneTree:ENSGT00550000074311
HOGENOM:HOG000182823 HOVERGEN:HBG053520 CTD:5094 KO:K13162
OMA:CVVMLEL HSSP:Q9UNW9 EMBL:CR848672 EMBL:BC045508 EMBL:BC066603
EMBL:AY398394 IPI:IPI00495300 RefSeq:NP_957486.1 UniGene:Dr.76907
SMR:Q7ZVK5 Ensembl:ENSDART00000025885 GeneID:321844 KEGG:dre:321844
InParanoid:Q7ZVK5 NextBio:20807553 Uniprot:Q7ZVK5
Length = 318
Score = 146 (56.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 53/197 (26%), Positives = 98/197 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTTA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E D S S AT++ + I VP + G +IG+GG I
Sbjct: 68 IFKAFSMIIEKLEE-DISSSMS---NSTATSKPPVT---LRIVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD-MRQIEIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER + + G + IE +++ +L + T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGTPLSIIECVKQICVVMLESPPKGVTIP 177
Query: 378 GGFNQQAYRPRVPTGPP 394
YRP+ P+G P
Sbjct: 178 -------YRPK-PSGSP 186
>UNIPROTKB|D4A458 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 IPI:IPI00767290 Ensembl:ENSRNOT00000057377
ArrayExpress:D4A458 Uniprot:D4A458
Length = 618
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 71/268 (26%), Positives = 96/268 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQSTATXGQTAY 66
Query: 593 XXXYQSQ-----VPSA-QSYGPNVPHQQQYPY----ATSGPTQQTYPS---YGSAPAPDS 639
Y P+A Q+Y V Y AT TQ +Y + YG+ PA +
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPA 126
Query: 640 YNQPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAYPEQ 694
Y Q PA+ AP PQ G QP Q+ + G P+ GYGQ Y +YP Q
Sbjct: 127 YGQQPAATAPTRPQD-GNKPAETSQP---QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQ 182
Query: 695 PATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYDQSASQST 748
P T+ Y Y +Q GQP Y Q ++ Q SY Q T
Sbjct: 183 PVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYGQQPP--T 238
Query: 749 AYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
+Y G+ + + Y Q S
Sbjct: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSS 266
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 66/212 (31%), Positives = 84/212 (39%)
Query: 502 NYGQPHTSEYXXXXXXXXXXXXXXXGHG-YDDNHAPV---QHPYGGHS--NSQPVYSQGG 555
+YGQP T G G YD A V Q Y S +QP Y G
Sbjct: 69 SYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYG 128
Query: 556 LQSGYHQHQYGKPPYG-MPAQGTQPQS----YXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Q +P G PA+ +QPQS Y Y QVP + P V
Sbjct: 129 QQPAATAPT--RPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYP-QVPGSYPMQP-V 184
Query: 611 PHQQQYP---YATSGPT---QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP-NYP- 662
YP Y++S PT Q +Y + P SY Q S+ G GQ P +YP
Sbjct: 185 TAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQ--SSYGQQSSYGQQPPTSYPP 242
Query: 663 QPGG-QQAPS-YGQVAPTAGYGQYTNTQQAYP 692
Q G QAPS Y Q ++ YGQ ++ +Q +P
Sbjct: 243 QTGSYSQAPSQYSQ--QSSSYGQQSSFRQDHP 272
>UNIPROTKB|F1NPL2 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:AADN02008174
IPI:IPI00812713 Ensembl:ENSGALT00000021485 ArrayExpress:F1NPL2
Uniprot:F1NPL2
Length = 319
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 53/196 (27%), Positives = 95/196 (48%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPE-----RIVTITGPTDA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A+ E D S + T++ V VP + G +IG+GG I
Sbjct: 68 IFKAFSMI-ALKFEEDINAS---MTNSTVTSKPPVTLRLV---VPASQCGSLIGKGGSKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 378 GGFNQQAYRPRVPTGP 393
YRP+ + P
Sbjct: 178 -------YRPKPASAP 186
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T S ++ +PN+ +G +IG+ G I ++ SGA+I+I A+A +A R V I G+ +N
Sbjct: 241 TSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI---ANATEGSAERQVTITGSPAN 297
Query: 259 IDKAEKLINA 268
I A+ LINA
Sbjct: 298 ISLAQYLINA 307
>RGD|1307430 [details] [associations]
symbol:Pcbp3 "poly(rC) binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1307430 GO:GO:0003723
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 CTD:54039 UniGene:Rn.107537
EMBL:BC079196 IPI:IPI00464574 RefSeq:NP_001011945.1 SMR:Q6AY48
IntAct:Q6AY48 MINT:MINT-7138861 Ensembl:ENSRNOT00000001675
GeneID:294336 KEGG:rno:294336 NextBio:638024 Genevestigator:Q6AY48
Uniprot:Q6AY48
Length = 319
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 65/239 (27%), Positives = 110/239 (46%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 68 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGS----HPSQPMAYDY--PQRGPYP---SQNPHYPHL 427
+ A P + G + +G HP Q Q+ P+P NP +P L
Sbjct: 178 YR-PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGL 235
>UNIPROTKB|F1NPL4 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074311 EMBL:AADN02008174
IPI:IPI00571530 Ensembl:ENSGALT00000021482 ArrayExpress:F1NPL4
Uniprot:F1NPL4
Length = 326
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 53/196 (27%), Positives = 95/196 (48%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPE-----RIVTITGPTDA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A+ E D S + T++ V VP + G +IG+GG I
Sbjct: 68 IFKAFSMI-ALKFEEDINAS---MTNSTVTSKPPVTLRLV---VPASQCGSLIGKGGSKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 378 GGFNQQAYRPRVPTGP 393
YRP+ + P
Sbjct: 178 -------YRPKPASAP 186
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T S ++ +PN+ +G +IG+ G I ++ SGA+I+I A+A +A R V I G+ +N
Sbjct: 244 TSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI---ANATEGSAERQVTITGSPAN 300
Query: 259 IDKAEKLINA 268
I A+ LINA
Sbjct: 301 ISLAQYLINA 310
>UNIPROTKB|J9P7G2 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 EMBL:AAEX03026610
Ensembl:ENSCAFT00000027552 OMA:FGGRWGP Uniprot:J9P7G2
Length = 650
Score = 150 (57.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 72/273 (26%), Positives = 97/273 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y G++ +QP Y YG YG P + Q+
Sbjct: 10 SQAAAQQGYSGYT-AQPTQGYAQTTQAYGHQSYGT--YGQPTDVSYTQAQTTATYGQTAY 66
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYP--------YATSGP----TQQTYPS---YGSAPAP 637
Y Q P+ + P P P Y T+ TQ +Y + YG+ PA
Sbjct: 67 ATSY-GQPPAGYTT-PTAPQAYIQPVQGYGAGAYDTTTAMVTTTQASYAAQSTYGTQPAY 124
Query: 638 DSYNQPPAS-APGYPQQAGQ-AVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAY 691
+Y Q PA+ AP PQ+ + A + PQ Y Q P+ GYGQ Y +Y
Sbjct: 125 PAYGQQPAATAPARPQEGNKPAETSQPQ---SSIGGYNQ--PSLGYGQSNYSYPQVPGSY 179
Query: 692 PEQPATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYDQSAS 745
P QP T+ Y Y TQ GQP Y Q ++ Q SY Q
Sbjct: 180 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYGQQPP 237
Query: 746 QSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQ 778
T+Y G + + Y Q S Q
Sbjct: 238 --TSYPPQTGYYSQAPSQYSQQSSSYGQQSSFQ 268
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 64/214 (29%), Positives = 83/214 (38%)
Query: 502 NYGQPHTSEYXXXXXXXXXXXXXXXGHG-YDDNHAPV---QHPYGGHSN--SQPVYSQGG 555
+YGQP G G YD A V Q Y S +QP Y G
Sbjct: 69 SYGQPPAGYTTPTAPQAYIQPVQGYGAGAYDTTTAMVTTTQASYAAQSTYGTQPAYPAYG 128
Query: 556 LQSGYHQHQYGKPPYG-MPAQGTQPQS----YXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Q +P G PA+ +QPQS Y Y QVP + P V
Sbjct: 129 QQPAATAP--ARPQEGNKPAETSQPQSSIGGYNQPSLGYGQSNYSYP-QVPGSYPMQP-V 184
Query: 611 PHQQQYP---YATSGPT---QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP-NYPQ 663
YP Y+++ PT Q +Y + P SY Q S+ G GQ P +YP
Sbjct: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQ--SSYGQQSSYGQQPPTSYPP 242
Query: 664 PGG--QQAPS-YGQVAPTAGYGQYTNTQQAYPEQ 694
G QAPS Y Q ++ YGQ ++ QQ +P +
Sbjct: 243 QTGYYSQAPSQYSQ--QSSSYGQQSSFQQDHPSK 274
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 72/252 (28%), Positives = 90/252 (35%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQ 604
S YSQ Q GY + +P G AQ TQ + Y +Q +
Sbjct: 3 STDYSTYSQAAAQQGYSGYT-AQPTQGY-AQTTQAYGHQSYGTYGQPTDVSY-TQAQTTA 59
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPAS--APGYPQQAGQAVP--- 659
+YG Q YATS Q Y + AP +Y QP A Y
Sbjct: 60 TYG-------QTAYATS--YGQPPAGYTTPTAPQAYIQPVQGYGAGAYDTTTAMVTTTQA 110
Query: 660 NYPQP---GGQQA-PSYGQV-APTAGYGQYTNTQQAYPEQPATSNAGY-----GYQGTQD 709
+Y G Q A P+YGQ A TA + A QP +S GY GY G +
Sbjct: 111 SYAAQSTYGTQPAYPAYGQQPAATAPARPQEGNKPAETSQPQSSIGGYNQPSLGY-GQSN 169
Query: 710 XXXXXXXXXXXXXXXTGQPGYAQPA--ATQP-SYDQSA-SQSTAYGVAQGTAA-AGYGKT 764
T P Y + +TQP SYDQS+ SQ YG + YG+
Sbjct: 170 YSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQ 229
Query: 765 VS----PQPGYP 772
S P YP
Sbjct: 230 SSYGQQPPTSYP 241
>UNIPROTKB|F1LN98 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00530000063105 IPI:IPI00364603
Ensembl:ENSRNOT00000012634 ArrayExpress:F1LN98 Uniprot:F1LN98
Length = 656
Score = 150 (57.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 71/268 (26%), Positives = 96/268 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQSTATXGQTAY 66
Query: 593 XXXYQSQ-----VPSA-QSYGPNVPHQQQYPY----ATSGPTQQTYPS---YGSAPAPDS 639
Y P+A Q+Y V Y AT TQ +Y + YG+ PA +
Sbjct: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPA 126
Query: 640 YNQPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNTQQAYPEQ 694
Y Q PA+ AP PQ G QP Q+ + G P+ GYGQ Y +YP Q
Sbjct: 127 YGQQPAATAPTRPQD-GNKPAETSQP---QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQ 182
Query: 695 PATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYDQSASQST 748
P T+ Y Y +Q GQP Y Q ++ Q SY Q T
Sbjct: 183 PVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYGQQPP--T 238
Query: 749 AYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
+Y G+ + + Y Q S
Sbjct: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSS 266
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 66/212 (31%), Positives = 84/212 (39%)
Query: 502 NYGQPHTSEYXXXXXXXXXXXXXXXGHG-YDDNHAPV---QHPYGGHS--NSQPVYSQGG 555
+YGQP T G G YD A V Q Y S +QP Y G
Sbjct: 69 SYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYG 128
Query: 556 LQSGYHQHQYGKPPYG-MPAQGTQPQS----YXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Q +P G PA+ +QPQS Y Y QVP + P V
Sbjct: 129 QQPAATAPT--RPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYP-QVPGSYPMQP-V 184
Query: 611 PHQQQYP---YATSGPT---QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP-NYP- 662
YP Y++S PT Q +Y + P SY Q S+ G GQ P +YP
Sbjct: 185 TAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQ--SSYGQQSSYGQQPPTSYPP 242
Query: 663 QPGG-QQAPS-YGQVAPTAGYGQYTNTQQAYP 692
Q G QAPS Y Q ++ YGQ ++ +Q +P
Sbjct: 243 QTGSYSQAPSQYSQ--QSSSYGQQSSFRQDHP 272
>RGD|1311919 [details] [associations]
symbol:Ss18 "synovial sarcoma translocation, Chromosome 18"
species:10116 "Rattus norvegicus" [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISO] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005881 "cytoplasmic microtubule" evidence=ISO] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0007243
"intracellular protein kinase cascade" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=ISO]
[GO:0042493 "response to drug" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048013 "ephrin receptor signaling pathway"
evidence=ISO] RGD:1311919 HOGENOM:HOG000048717 HOVERGEN:HBG003892
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 UniGene:Rn.1014
EMBL:BC083824 IPI:IPI00364949 STRING:Q5XI66
Ensembl:ENSRNOT00000041836 InParanoid:Q5XI66 Genevestigator:Q5XI66
Uniprot:Q5XI66
Length = 397
Score = 132 (51.5 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 55/154 (35%), Positives = 58/154 (37%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQ 599
PY P G Q Y+ QY G P +G Q Y YQ
Sbjct: 262 PYRPPQQGPPQQYSG--QEDYYGDQYSHGGQG-PPEGMNQQYYPDGNSQYGQQQDAYQGP 318
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP 659
P Q Y P P QQQYP G QQ YP P + P P YPQ GQ
Sbjct: 319 PPQ-QGY-P--PQQQQYP----G--QQGYPGQQQGYGP-TQGGPGPQYPNYPQGQGQQYG 367
Query: 660 NY-P-QPGGQQAPSYGQVAPTAGY--GQYTNTQQ 689
Y P QPG Q P Q P GY GQY N QQ
Sbjct: 368 GYRPTQPGPPQPP---QQRPY-GYDQGQYGNYQQ 397
Score = 126 (49.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 59/181 (32%), Positives = 63/181 (34%)
Query: 540 PYGG--HSNSQ--PVYSQGGLQSGYHQH-QYGKPPYGMPAQGTQPQSYXXXXXXXXXXXX 594
P GG H Q P+ G + G H Q PPY P QG PQ Y
Sbjct: 228 PPGGAQHYQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQGP-PQQYSGQEDYYGDQYS 286
Query: 595 XYQSQVPSA--QSYGP--NVPHQQQYPYATSGPTQQTYPSYGSA-PAPDSYNQPPASAPG 649
P Q Y P N + QQ P QQ YP P Y P G
Sbjct: 287 HGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGY---PGQQQG 343
Query: 650 Y-PQQAGQA--VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGY-Q 705
Y P Q G PNYPQ GQQ YG Y TQ P+ P YGY Q
Sbjct: 344 YGPTQGGPGPQYPNYPQGQGQQ------------YGGYRPTQPGPPQPP--QQRPYGYDQ 389
Query: 706 G 706
G
Sbjct: 390 G 390
Score = 59 (25.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 19/66 (28%), Positives = 24/66 (36%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ-QMAPRSNY 443
+ P GP Q S + P + + G Y P +P N Q P NY
Sbjct: 142 HMPMQGPGPSQLSMTNSSMNMPSS-SHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNY 200
Query: 444 GGPPNM 449
G PNM
Sbjct: 201 GPRPNM 206
Score = 50 (22.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 37/142 (26%), Positives = 57/142 (40%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLP-EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++G GG +Q + ++ P H+P +G G + + +T + + +
Sbjct: 119 MVG-GGPPAPHMQNQMNGQMPG-PNHMPMQGPGPSQ--LSMTNSSMNMPSSSHGSMGGYN 174
Query: 369 QTVRPSTLSGGF-NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNP---HY 424
+V PS+ S NQ P G +GPR P+ M P +GP Q P Y
Sbjct: 175 HSV-PSSQSMPVQNQMTMSQGQPMG--NYGPR---PNMNMQ---PNQGPMMHQQPPSQQY 225
Query: 425 PHLPYG--NYPPQQMAPRSNYG 444
P G +Y QQ AP G
Sbjct: 226 SMPPGGAQHYQGQQ-APMGLMG 246
>ZFIN|ZDB-GENE-070424-78 [details] [associations]
symbol:zgc:162999 "zgc:162999" species:7955 "Danio
rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
Pfam:PF13014 PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-070424-78
GO:GO:0003723 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 EMBL:BC135088 IPI:IPI00845944
RefSeq:NP_001083021.1 UniGene:Dr.122660 ProteinModelPortal:A4IGG5
SMR:A4IGG5 PRIDE:A4IGG5 GeneID:100038772 KEGG:dre:100038772
NextBio:20788560 Bgee:A4IGG5 Uniprot:A4IGG5
Length = 350
Score = 145 (56.1 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 51/197 (25%), Positives = 96/197 (48%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ S A+I ++ + + R V I G
Sbjct: 15 TLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVS-----EGNCPERIVTITGPTDA 69
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE-QVEIKVPNEKVGLIIGRGGET 317
I KA +I A E D + ++ +QA+ + + VP + G +IG+GG
Sbjct: 70 IFKAFAMI-AYKFEED-------IINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSK 121
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTL 376
IK ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 122 IKEMRESTGAQVQVAGDMLPN---STERAVTISGTPEAIIQCVKQICVVMLESPPKGATI 178
Query: 377 SGGFNQQAYRPRVPTGP 393
YRP+ T P
Sbjct: 179 P-------YRPKPATAP 188
Score = 117 (46.2 bits), Expect = 0.00078, P = 0.00078
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 291 ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVT 350
AS A E+ +PN+ +G IIGR G I ++ SGA+I++ +GS +R + +T
Sbjct: 262 ASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAM----EGSSDRQITIT 317
Query: 351 GDMRQIEIAQEMI----KEVLSQTVRPSTLS 377
G I +AQ +I ++V + PST++
Sbjct: 318 GTPANISLAQYLINARFRDVAAMWTDPSTMT 348
>TAIR|locus:2157403 [details] [associations]
symbol:AT5G50940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR000684
PROSITE:PS00115 EMBL:CP002688 GO:GO:0003677 GO:GO:0006366
GO:GO:0005665 IPI:IPI00535051 RefSeq:NP_851164.2 UniGene:At.19183
ProteinModelPortal:F4KAH4 SMR:F4KAH4 EnsemblPlants:AT5G50940.1
GeneID:3771483 KEGG:ath:AT5G50940 OMA:GKSQNEI Uniprot:F4KAH4
Length = 271
Score = 142 (55.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 31/72 (43%), Positives = 50/72 (69%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
+R I V KV +L+G A T+R+LQ+N A+I+I +D++ D +A RPVE+ GT+ I+
Sbjct: 190 TRTIHVSCPKVDLLVGAAA-TLRFLQHNLCAQIRILKDSEVDLKSAQRPVELTGTVLQIE 248
Query: 261 KAEKLINAVIAE 272
++LI +V+AE
Sbjct: 249 FTQQLIESVLAE 260
>UNIPROTKB|Q17QV0 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 CTD:54039 OMA:FWAPSVL
OrthoDB:EOG4XH00F EMBL:DAAA02003497 EMBL:DAAA02003498
EMBL:DAAA02003499 EMBL:DAAA02003500 EMBL:DAAA02003501 EMBL:BC118166
IPI:IPI00733966 RefSeq:NP_001069752.1 UniGene:Bt.27304 SMR:Q17QV0
Ensembl:ENSBTAT00000043482 GeneID:613725 KEGG:bta:613725
InParanoid:Q17QV0 NextBio:20898729 Uniprot:Q17QV0
Length = 361
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 59/211 (27%), Positives = 100/211 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 68 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMA 408
YRP+ P P G + P+A
Sbjct: 178 -------YRPK-PASTPVIFAGGQVRADPLA 200
>UNIPROTKB|E9PFP8 [details] [associations]
symbol:PCBP3 "Poly(rC)-binding protein 3" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
EMBL:AJ011931 EMBL:AJ239328 EMBL:AL133492 EMBL:AL133493
EMBL:AL592528 HGNC:HGNC:8651 ChiTaRS:PCBP3 IPI:IPI00550365
ProteinModelPortal:E9PFP8 SMR:E9PFP8 PRIDE:E9PFP8
Ensembl:ENST00000400304 UCSC:uc002zht.2 ArrayExpress:E9PFP8
Bgee:E9PFP8 Uniprot:E9PFP8
Length = 361
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 59/211 (27%), Positives = 100/211 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 68 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMA 408
YRP+ P P G + P+A
Sbjct: 178 -------YRPK-PASTPVIFAGGQVRADPLA 200
>UNIPROTKB|F8VZX2 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC068889 EMBL:AC023509
HGNC:HGNC:8648 ChiTaRS:PCBP2 IPI:IPI01021216
ProteinModelPortal:F8VZX2 SMR:F8VZX2 Ensembl:ENST00000549863
ArrayExpress:F8VZX2 Bgee:F8VZX2 Uniprot:F8VZX2
Length = 321
Score = 146 (56.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 53/195 (27%), Positives = 98/195 (50%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + I + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKG 177
Query: 379 GFNQQAYRPRVPTGP 393
YRP+ + P
Sbjct: 178 V--TIPYRPKPSSSP 190
Score = 39 (18.8 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQ 562
PY +S PV GG + HQ
Sbjct: 181 PYRPKPSSSPVIFAGGQLTKLHQ 203
>UNIPROTKB|B4DLC0 [details] [associations]
symbol:PCBP2 "Poly(rC)-binding protein 2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 EMBL:AC068889
EMBL:AC023509 HOVERGEN:HBG053520 HGNC:HGNC:8648 ChiTaRS:PCBP2
EMBL:AK296930 IPI:IPI01009186 SMR:B4DLC0 STRING:B4DLC0
Ensembl:ENST00000541275 UCSC:uc010soh.1 Uniprot:B4DLC0
Length = 301
Score = 143 (55.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 59/239 (24%), Positives = 112/239 (46%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER + + G + I E +++ +L + T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 378 GGFNQQAYRPRVPTGPPQW-GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
YRP+ + P + G + + + + +P P NP P Y Q
Sbjct: 178 -------YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 229
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 116 (45.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 49/152 (32%), Positives = 58/152 (38%)
Query: 539 HPYGGHSNSQPVYSQGGLQSGYH-QHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
+PY P+Y+Q Q H QHQ Y P Q QPQ +
Sbjct: 497 NPYAQQQQQHPMYAQYQQQQQQHAQHQQNMSGY--PQQQQQPQHPHQHQQPASVPMQHHP 554
Query: 598 SQVPSAQSYGPNVPHQQQYP--YA---TSGPTQQTYPSYG-SAPAPDSYNQPPA-SAPGY 650
Q PS PN QQQ+P Y ++ P PS AP S Q PA S P
Sbjct: 555 QQHPSQHQTQPN-QQQQQHPSGYGIGVSTAPASME-PSQSVDQSAPPSQAQIPATSTPST 612
Query: 651 PQQAGQAVPNYPQ-PG--GQQAPSYGQVAPTA 679
Q A P +P P G Q P+ VAP A
Sbjct: 613 SSQQQNAYPEFPDFPSSSGYQEPT---VAPEA 641
Score = 95 (38.5 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 29/76 (38%), Positives = 35/76 (46%)
Query: 382 QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP--QRGPYPSQNPHYPHLPYGNYPP--QQM 437
QQA + + GPP +GP G P Y P Q+ PY Q P + + YPP QQ
Sbjct: 194 QQAGQQQAQ-GPPGYGPYGYAPQASTGYPPPPSQQSPYAPQAGPPPQMRH-QYPPHSQQQ 251
Query: 438 APRS------NYGGPP 447
AP YGGPP
Sbjct: 252 APPGYWDGYQGYGGPP 267
Score = 95 (38.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 48/169 (28%), Positives = 67/169 (39%)
Query: 611 PHQQQYPYATSG---P---TQQTYPSYGS-APAPDSYNQPPASAPGYPQQAGQAVPNYPQ 663
P+QQQY +G P QQ +P Y + Q + GYPQQ Q P +P
Sbjct: 483 PYQQQYNGMENGSGNPYAQQQQQHPMYAQYQQQQQQHAQHQQNMSGYPQQQQQ--PQHPH 540
Query: 664 PGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSN-AGYGYQGTQDXXXXXXXXXXXXX 722
Q A Q P Q+ + Q P Q + +GYG G
Sbjct: 541 QHQQPASVPMQHHPQ----QHPSQHQTQPNQQQQQHPSGYGI-GVS--TAPASMEPSQSV 593
Query: 723 XXTGQPGYAQ-PAATQPSYDQSASQSTAYG-VAQGTAAAGYGK-TVSPQ 768
+ P AQ PA + PS S+ Q AY +++GY + TV+P+
Sbjct: 594 DQSAPPSQAQIPATSTPS--TSSQQQNAYPEFPDFPSSSGYQEPTVAPE 640
>UNIPROTKB|Q28009 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0003723
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 KO:K13098
HOGENOM:HOG000038010 CTD:2521 EMBL:U26024 EMBL:BC119965
IPI:IPI00705463 RefSeq:NP_776337.1 UniGene:Bt.2474
ProteinModelPortal:Q28009 STRING:Q28009 PRIDE:Q28009
Ensembl:ENSBTAT00000007571 GeneID:280796 KEGG:bta:280796
InParanoid:Q28009 OrthoDB:EOG4DV5NH NextBio:20804952 Uniprot:Q28009
Length = 513
Score = 147 (56.8 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 59/174 (33%), Positives = 75/174 (43%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQA-PSYGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ YGQ
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSNQ-------PYGQQSYGGYGQSTD 46
Query: 678 TAGYGQ--YTNTQ-QAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ-- 732
T+GYGQ Y+ + Q +T +A GY + PGY Q
Sbjct: 47 TSGYGQSSYSGSYGQTQNTGYSTQSAPQGYSSA-GGYGSSQSSQSSYGQQSSYPGYGQQP 105
Query: 733 -PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQ-YDSTQMYAAPR 784
P+ T SY S+SQS+ YG QG GYG+ S G Q Y Q Y P+
Sbjct: 106 APSGTSGSYG-SSSQSSGYGQPQG---GGYGQQ-SGYGGQQQSYGQQQSYNPPQ 154
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 49/175 (28%), Positives = 66/175 (37%)
Query: 602 SAQSYG--PNVPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPPASAP-GYPQQAGQA 657
+ QSYG P P Q Y ++ P QQ+Y YG + Y Q S G Q G +
Sbjct: 10 ATQSYGAYPTQPGQG-YSQQSNQPYGQQSYGGYGQSTDTSGYGQSSYSGSYGQTQNTGYS 68
Query: 658 VPNYPQPGGQQAPSYGQVAPT-AGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXX 716
+ PQ G A YG + + YGQ ++ Y +QPA S Y +
Sbjct: 69 TQSAPQ-GYSSAGGYGSSQSSQSSYGQQSS-YPGYGQQPAPSGTSGSYGSSSQSSGYGQP 126
Query: 717 XXXXXXXXTGQPGYAQPAATQPSYD--QSASQSTAYGVAQGTAAAGYGKTVSPQP 769
+G G Q Q SY+ Q Q + Y + G G G QP
Sbjct: 127 QGGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGGGGGGGSYGQDQP 181
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 73/268 (27%), Positives = 90/268 (33%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXX 586
G GY PYG S Y Q SGY Q Y YG TQ Y
Sbjct: 22 GQGYSQQS---NQPYGQQSYGG--YGQSTDTSGYGQSSYSGS-YGQ----TQNTGYSTQS 71
Query: 587 X-XXXXXXXXYQSQVPSAQSYGPNVPHQQQYP-YATSGPTQQTYPSYGSAPAPDSYNQPP 644
Y S S SYG Q YP Y T SYGS+ Y QP
Sbjct: 72 APQGYSSAGGYGSSQSSQSSYG----QQSSYPGYGQQPAPSGTSGSYGSSSQSSGYGQPQ 127
Query: 645 ASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQA----------Y-PE 693
GY QQ+G Q GQQ SY P GYGQ + + Y +
Sbjct: 128 GG--GYGQQSGYG--GQQQSYGQQQ-SYN---PPQGYGQQSQYNSSGGGGGGGGGSYGQD 179
Query: 694 QPA-TSNAGYGYQGTQDXXXXXXXXXXXXXXXT--GQPGYAQPAATQPSYDQSASQSTAY 750
QP+ +S G G G QD G GY + + + +
Sbjct: 180 QPSMSSGGGGGGYGNQDQSGGYGGGQQDRGGRGRGGGGGYNRSSGGYEPRGRGGGRGGRG 239
Query: 751 GVAQGTAAAGYGKTVSPQPGYPQYDSTQ 778
G+ G+ G+ K P+ ++DS Q
Sbjct: 240 GMG-GSDRGGFNKFGGPRDQGSRHDSEQ 266
Score = 122 (48.0 bits), Expect = 0.00041, P = 0.00041
Identities = 59/181 (32%), Positives = 64/181 (35%)
Query: 541 YGGHSNSQPV--YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQS 598
YG + +QP YSQ Q Y Q YG G SY QS
Sbjct: 14 YGAYP-TQPGQGYSQQSNQP-YGQQSYGGYGQSTDTSGYGQSSYSGSYGQTQNTGYSTQS 71
Query: 599 Q---VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD----SYNQPPASAPGYP 651
SA YG + Q Y G Q +YP YG PAP SY S+ GY
Sbjct: 72 APQGYSSAGGYGSSQSSQSSY-----GQ-QSSYPGYGQQPAPSGTSGSYGSSSQSS-GYG 124
Query: 652 QQAGQAVPNYPQPGGQQAPSYGQVA---PTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQ 708
Q G GGQQ SYGQ P GYGQ Q Y G G G Q
Sbjct: 125 QPQGGGYGQQSGYGGQQQ-SYGQQQSYNPPQGYGQ----QSQYNSSGGGGGGGGGSYG-Q 178
Query: 709 D 709
D
Sbjct: 179 D 179
>UNIPROTKB|G8ENL4 [details] [associations]
symbol:FUS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 EMBL:CU464163 EMBL:JF940526
Ensembl:ENSSSCT00000036326 Uniprot:G8ENL4
Length = 517
Score = 147 (56.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 64/178 (35%), Positives = 77/178 (43%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ S YGQ A
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSNQ-------PYGQQSYSGYGQSAD 46
Query: 678 TAGYGQ------YTNTQQA-YPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGY 730
T+GYGQ Y TQ Y Q A GYG G + PGY
Sbjct: 47 TSGYGQSSYGSSYGQTQNTGYGAQSAPQ--GYGSTG---GYGSGQGSQSSYGQQSSYPGY 101
Query: 731 AQ---PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQ-YDSTQMYAAPR 784
Q P++T SY S SQS+ YG Q + GYG+ S G Q Y Q Y P+
Sbjct: 102 GQQPAPSSTSGSYGTS-SQSSGYGQPQ---SGGYGQQ-SGYGGQQQSYGQQQSYNPPQ 154
Score = 142 (55.0 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 64/197 (32%), Positives = 73/197 (37%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXX 586
G GY PYG S S Y Q SGY Q YG YG TQ Y
Sbjct: 22 GQGYSQQS---NQPYGQQSYSG--YGQSADTSGYGQSSYGSS-YGQ----TQNTGYGAQS 71
Query: 587 X-XXXXXXXXYQSQVPSAQSYGPNVPHQQQYP-YATSGPTQQTYPSYGSAPAPDSYNQPP 644
Y S S SYG Q YP Y T SYG++ Y QP
Sbjct: 72 APQGYGSTGGYGSGQGSQSSYG----QQSSYPGYGQQPAPSSTSGSYGTSSQSSGYGQPQ 127
Query: 645 ASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ---YTNTQQ--------AY-P 692
+ GY QQ+G Q GQQ SY P GYGQ Y ++ +Y
Sbjct: 128 SG--GYGQQSGYG--GQQQSYGQQQ-SYN---PPQGYGQQNQYNSSSGGGGGGGGGSYGQ 179
Query: 693 EQPATSNAGYGYQGTQD 709
+QP+ S G G G QD
Sbjct: 180 DQPSMSGGGGGGYGNQD 196
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 46/168 (27%), Positives = 62/168 (36%)
Query: 602 SAQSYG--PNVPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPP-ASAPGYPQQAGQA 657
+ QSYG P P Q Y ++ P QQ+Y YG + Y Q S+ G Q G
Sbjct: 10 ATQSYGAYPTQPGQG-YSQQSNQPYGQQSYSGYGQSADTSGYGQSSYGSSYGQTQNTGYG 68
Query: 658 VPNYPQPGGQQAPSYGQ-VAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXX 716
+ PQ G YG + YGQ ++ Y +QPA S+ Y +
Sbjct: 69 AQSAPQGYGSTG-GYGSGQGSQSSYGQQSS-YPGYGQQPAPSSTSGSYGTSSQSSGYGQP 126
Query: 717 XXXXXXXXTGQPGYAQPAATQPSYD--QSASQSTAYGVAQGTAAAGYG 762
+G G Q Q SY+ Q Q Y + G G G
Sbjct: 127 QSGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGG 174
>UNIPROTKB|E2RSH9 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 OMA:GSQYGPQ Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:AAEX03001719 Ensembl:ENSCAFT00000019631 Uniprot:E2RSH9
Length = 2286
Score = 145 (56.1 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 58/185 (31%), Positives = 74/185 (40%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQ-PVYSQGGLQSGYHQHQYGK--PPYGM--PA-QGTQPQ 580
GHGY P Q PYG + + P+ QG QS Y + PPYG P+ G Q Q
Sbjct: 415 GHGY-----PGQ-PYGSQTPQRYPMAMQGRAQSAMGGLSYAQQIPPYGQQGPSGYGQQGQ 468
Query: 581 S--YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD 638
+ Y Y Q PS + P QQ P + Q + P Y P+
Sbjct: 469 TPYYNQQSPHPQQQQPPYSQQPPSQNPHAQ--PSYQQQPQSQPPQLQASQPPYSQQPSQP 526
Query: 639 SYNQPPASAPGY-P--QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
+ Q P P P QQ Q+ P Y QP Q +P Y Q P + Q AYP QP
Sbjct: 527 PHQQSPTPYPSQQPTTQQHPQSQPPYSQPQAQ-SP-YQQQQPQQPASSTLSQQAAYP-QP 583
Query: 696 ATSNA 700
+ +
Sbjct: 584 QSQQS 588
Score = 143 (55.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 78/265 (29%), Positives = 92/265 (34%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKP-PYGMPAQGTQPQSYXXXXXXXXX 591
+HAP+ P +QP+ S Q +P PYG GT P S
Sbjct: 359 HHAPMS-PGSSGGGAQPLARTPQPSSPMDQMGKMRPQPYG----GTNPYSQQQGPSSGPQ 413
Query: 592 XXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y Q P YG P Q+YP A G Q A Y Q S GY
Sbjct: 414 QGHGYPGQ-P----YGSQTP--QRYPMAMQGRAQSAMGGLSYAQQIPPYGQQGPS--GYG 464
Query: 652 QQAGQAVPNY----PQPGGQQAPSYGQVAPTAG-YGQ--YTNTQQAYPEQPATSNAGYGY 704
QQ GQ P Y P P QQ P Y Q P+ + Q Y Q+ P Q S Y
Sbjct: 465 QQ-GQT-PYYNQQSPHPQ-QQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQPPYSQ 521
Query: 705 QGTQDXXXXXXXXXXXXXXXT-----GQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA 759
Q +Q T QP Y+QP A P Y Q Q A AA
Sbjct: 522 QPSQPPHQQSPTPYPSQQPTTQQHPQSQPPYSQPQAQSP-YQQQQPQQPASSTLSQQAA- 579
Query: 760 GYGKTVSPQPGYPQYDSTQMYAAPR 784
Y + S Q Y S Q + P+
Sbjct: 580 -YPQPQSQQSQQTAY-SQQRFPPPQ 602
Score = 69 (29.3 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 23/69 (33%), Positives = 29/69 (42%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPY--PSQNPHYPHL 427
P + GG A P+ P+ P G QP P Q+GP P Q YP
Sbjct: 365 PGSSGGGAQPLARTPQ-PSSPMD--QMGKMRPQPYGGTNPYSQQQGPSSGPQQGHGYPGQ 421
Query: 428 PYGNYPPQQ 436
PYG+ PQ+
Sbjct: 422 PYGSQTPQR 430
Score = 49 (22.3 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 397 GPRGSHP-SQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
G G P + P + P N +YP+ PPQ A S GG P
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTP 239
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 16/58 (27%), Positives = 19/58 (32%)
Query: 392 GPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP-HLPYGNYPPQQMAPRSNYGGPPN 448
GP Q P+ YP R YP Y P G P A + PP+
Sbjct: 197 GPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGSGAAAAAGSKPPPS 254
Score = 41 (19.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 57 AHGSEVKRPRLDDDKTEKPDG 77
++G+ RP L+++ TE P G
Sbjct: 102 SNGNAGPRPALNNNLTEPPGG 122
>RGD|1566093 [details] [associations]
symbol:RGD1566093 "similar to Fusion (involved in t(12;16) in
malignant liposarcoma)" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1566093
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 OrthoDB:EOG4DV5NH IPI:IPI00361397 PRIDE:D3ZSJ6
Ensembl:ENSRNOT00000031767 Uniprot:D3ZSJ6
Length = 460
Score = 146 (56.5 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 60/176 (34%), Positives = 80/176 (45%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ S YGQ A
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSNQ-------PYGQQSYSGYGQSAD 46
Query: 678 TAGYGQ--YTNT-QQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ-- 732
T+GYGQ Y ++ +Q T +A GY G+ + PGY Q
Sbjct: 47 TSGYGQSSYGSSYEQTQNTGYGTQSAPQGY-GSTGGYGSSQSSQSSYGQQSSYPGYGQQP 105
Query: 733 -PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVS---PQPGYPQYDSTQMYAAPR 784
P++T SY S SQS++YG Q + GYG+ Q Y Q S+ Y P+
Sbjct: 106 APSSTSGSYGGS-SQSSSYGQPQ---SGGYGQQSGYGGQQQSYGQQQSS--YNPPQ 155
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/165 (32%), Positives = 69/165 (41%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Y+Q QS Y + +P G Q QP Q SYG +
Sbjct: 6 YTQQATQS-YGAYPT-QPGQGYSQQSNQPYGQQSYSGYGQSADTSGYGQ----SSYGSSY 59
Query: 611 PHQQQYPYAT-SGPTQQTYPS---YGSAPAPDS-YNQPPASAPGYPQQAGQAVPNYPQPG 665
Q Y T S P Q Y S YGS+ + S Y Q +S PGY QQ + + G
Sbjct: 60 EQTQNTGYGTQSAP--QGYGSTGGYGSSQSSQSSYGQQ-SSYPGYGQQPAPSSTSGSYGG 116
Query: 666 GQQAPSYGQVAPTAGYGQ---YTNTQQAYPEQPATSNA--GYGYQ 705
Q+ SYGQ + GYGQ Y QQ+Y +Q ++ N GYG Q
Sbjct: 117 SSQSSSYGQ-PQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQ 160
Score = 118 (46.6 bits), Expect = 0.00096, P = 0.00096
Identities = 52/164 (31%), Positives = 67/164 (40%)
Query: 602 SAQSYG--PNVPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
+ QSYG P P Q Y ++ P QQ+Y YG + Y Q S+ G + Q
Sbjct: 10 ATQSYGAYPTQPGQG-YSQQSNQPYGQQSYSGYGQSADTSGYGQ---SSYGSSYEQTQNT 65
Query: 659 PNYPQPGGQQAPS-YGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
Y G Q AP YG T GYG ++Q +Y +Q +S GYG Q
Sbjct: 66 -GY---GTQSAPQGYGS---TGGYGSSQSSQSSYGQQ--SSYPGYGQQPAPSSTSGSYGG 116
Query: 718 XXXXXXXTGQP---GYAQPAA---TQPSYDQSASQSTAYGVAQG 755
GQP GY Q + Q SY Q Q ++Y QG
Sbjct: 117 SSQSSSY-GQPQSGGYGQQSGYGGQQQSYGQ---QQSSYNPPQG 156
>UNIPROTKB|Q3SYT9 [details] [associations]
symbol:PCBP2 "Poly(RC) binding protein 2" species:9913 "Bos
taurus" [GO:0050687 "negative regulation of defense response to
virus" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0043161 GO:GO:0003723
GO:GO:0050687 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
HOGENOM:HOG000182823 HOVERGEN:HBG053520 OrthoDB:EOG46WZ8K CTD:5094
KO:K13162 OMA:CVVMLEL EMBL:DAAA02012861 EMBL:DAAA02012860
EMBL:BC103397 IPI:IPI00696193 RefSeq:NP_001029883.1
UniGene:Bt.49118 SMR:Q3SYT9 STRING:Q3SYT9
Ensembl:ENSBTAT00000027662 GeneID:540653 KEGG:bta:540653
InParanoid:Q3SYT9 NextBio:20878753 Uniprot:Q3SYT9
Length = 349
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 59/239 (24%), Positives = 112/239 (46%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER + + G + I E +++ +L + T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 378 GGFNQQAYRPRVPTGPPQW-GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
YRP+ + P + G + + + + +P P NP P Y Q
Sbjct: 178 -------YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 229
>UNIPROTKB|O14497 [details] [associations]
symbol:ARID1A "AT-rich interactive domain-containing
protein 1A" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0042921 "glucocorticoid receptor signaling pathway"
evidence=IDA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA;TAS] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030521 "androgen receptor signaling pathway"
evidence=IDA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=TAS] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IDA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 EMBL:AL034380 GO:GO:0007399 GO:GO:0030521
GO:GO:0003677 EMBL:CH471059 GO:GO:0006357 GO:GO:0006351
GO:GO:0000790 GO:GO:0003713 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 eggNOG:NOG12793 EMBL:AF231056 EMBL:AL512408
EMBL:AF521670 EMBL:AF219114 EMBL:AF265208 EMBL:AB001895
EMBL:AB024075 EMBL:AF268913 EMBL:AK223275 IPI:IPI00642705
IPI:IPI00643722 IPI:IPI00929427 PIR:T00022 RefSeq:NP_006006.3
RefSeq:NP_624361.1 UniGene:Hs.468972 PDB:1RYU PDBsum:1RYU
ProteinModelPortal:O14497 SMR:O14497 DIP:DIP-33016N IntAct:O14497
STRING:O14497 PhosphoSite:O14497 PaxDb:O14497 PRIDE:O14497
Ensembl:ENST00000324856 Ensembl:ENST00000374152
Ensembl:ENST00000457599 GeneID:8289 KEGG:hsa:8289 UCSC:uc001bmt.1
UCSC:uc001bmu.1 UCSC:uc001bmx.1 CTD:8289 GeneCards:GC01P027022
HGNC:HGNC:11110 HPA:CAB016334 HPA:HPA005456 MIM:603024 MIM:614607
neXtProt:NX_O14497 Orphanet:1465 PharmGKB:PA35960
HOVERGEN:HBG058196 InParanoid:O14497 KO:K11653 OMA:GSQYGPQ
OrthoDB:EOG437RD2 PhylomeDB:O14497 ChiTaRS:ARID1A
EvolutionaryTrace:O14497 GenomeRNAi:8289 NextBio:31061
ArrayExpress:O14497 Bgee:O14497 Genevestigator:O14497
GermOnline:ENSG00000117713 GO:GO:0048096 GO:GO:0030520
GO:GO:0006337 GO:GO:0042766 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 Uniprot:O14497
Length = 2285
Score = 144 (55.7 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 58/185 (31%), Positives = 74/185 (40%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQ-PVYSQGGLQSGYHQHQYGK--PPYGM--PA-QGTQPQ 580
GHGY P Q PYG + + P+ QG QS Y + PPYG P+ G Q Q
Sbjct: 414 GHGY-----PGQ-PYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQ 467
Query: 581 S--YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD 638
+ Y Y Q PS + P QQ P + Q + P Y P+
Sbjct: 468 TPYYNQQSPHPQQQQPPYSQQPPSQTPHAQ--PSYQQQPQSQPPQLQSSQPPYSQQPSQP 525
Query: 639 SYNQPPASAPGYP---QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
+ Q PA P QQ Q+ P Y QP Q +P Y Q P + Q AYP QP
Sbjct: 526 PHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQ-SP-YQQQQPQQPAPSTLSQQAAYP-QP 582
Query: 696 ATSNA 700
+ +
Sbjct: 583 QSQQS 587
Score = 133 (51.9 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 76/265 (28%), Positives = 90/265 (33%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKP-PYGMPAQGTQPQSYXXXXXXXXX 591
+HAP+ P QP+ S Q +P PYG GT P S
Sbjct: 358 HHAPMS-PGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYG----GTNPYSQQQGPPSGPQ 412
Query: 592 XXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y Q P YG P Q+YP G Q Y Q S GY
Sbjct: 413 QGHGYPGQ-P----YGSQTP--QRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPS--GYG 463
Query: 652 QQAGQAVPNY----PQPGGQQAPSYGQVAPT-AGYGQ--YTNTQQAYPEQPATSNAGYGY 704
QQ GQ P Y P P QQ P Y Q P+ + Q Y Q+ P Q +S Y
Sbjct: 464 QQ-GQT-PYYNQQSPHPQ-QQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQ 520
Query: 705 QGTQDXXXXXXXXXXXXXXXT-----GQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA 759
Q +Q T QP Y+QP A P Y Q Q A AA
Sbjct: 521 QPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSP-YQQQQPQQPAPSTLSQQAA- 578
Query: 760 GYGKTVSPQPGYPQYDSTQMYAAPR 784
Y + S Q Y S Q + P+
Sbjct: 579 -YPQPQSQQSQQTAY-SQQRFPPPQ 601
Score = 130 (50.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 56/174 (32%), Positives = 68/174 (39%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQ 599
PYG S Y Q G Q+ Y+ Q P P QP S QSQ
Sbjct: 453 PYGQQGPSG--YGQQG-QTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQP--QSQ 507
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQT---YPSYGSAPAPDSYNQPPASAPGYPQQAGQ 656
P QS P P+ QQ P + P QQ+ YPS S +QPP S P Q
Sbjct: 508 PPQLQSSQP--PYSQQ-P--SQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQ 562
Query: 657 AVPNYPQPG--GQQAPSYGQVAPTAGYGQYTN-TQQAYPEQPATSNAGYGYQGT 707
P P P QQA +Y Q P + Q T +QQ +P S +G Q +
Sbjct: 563 QQPQQPAPSTLSQQA-AYPQ--PQSQQSQQTAYSQQRFPPPQELSQDSFGSQAS 613
Score = 127 (49.8 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 54/177 (30%), Positives = 67/177 (37%)
Query: 538 QHPYG-GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXY 596
Q P G G P Y+Q QS + Q Q +PPY P +
Sbjct: 457 QGPSGYGQQGQTPYYNQ---QSPHPQQQ--QPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511
Query: 597 QSQVPSAQSYGPNVPHQQQ-YPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAG 655
QS P PHQQ PY + T Q +P S P P Y+QP A +P QQ
Sbjct: 512 QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQ--SQP-P--YSQPQAQSPYQQQQPQ 566
Query: 656 QAVPN-------YPQPGGQQAP--SYGQ--VAPTAGYGQYTNTQQAYPEQPATSNAG 701
Q P+ YPQP QQ+ +Y Q P Q + QA TS+ G
Sbjct: 567 QPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKG 623
Score = 69 (29.3 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 23/65 (35%), Positives = 27/65 (41%)
Query: 377 SGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP---QRGPY--PSQNPHYPHLPYGN 431
SGG Q R P+ P G QP P Q+GP P Q YP PYG+
Sbjct: 367 SGGGGQPLARTPQPSSPMD--QMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS 424
Query: 432 YPPQQ 436
PQ+
Sbjct: 425 QTPQR 429
Score = 64 (27.6 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 24/74 (32%), Positives = 32/74 (43%)
Query: 371 VRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG 430
+RP GG N + + P+GP Q G G +P QP PQR P Q +
Sbjct: 390 MRPQPY-GGTNPYSQQQGPPSGPQQ-G-HG-YPGQPYGSQTPQRYPMTMQGRAQSAMGGL 445
Query: 431 NYPPQQMAPRSNYG 444
+Y QQ+ P G
Sbjct: 446 SYT-QQIPPYGQQG 458
Score = 55 (24.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 17/58 (29%), Positives = 20/58 (34%)
Query: 392 GPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP-HLPYGNYPPQQMAPRSNYGGPPN 448
GP Q P+ YP R YP P Y P G P A + PP+
Sbjct: 197 GPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPS 254
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 57 AHGSEVKRPRLDDDKTEKPDG 77
++G+ RP L+++ TE P G
Sbjct: 103 SNGNAGPRPALNNNLTEPPGG 123
>TAIR|locus:2150956 [details] [associations]
symbol:AT5G15270 "AT5G15270" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014
PROSITE:PS50084 SMART:SM00322 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003723 eggNOG:NOG315872 KO:K13162
EMBL:AK228673 EMBL:AK229313 IPI:IPI00527841 RefSeq:NP_197031.3
RefSeq:NP_851040.1 UniGene:At.31826 ProteinModelPortal:Q0WNX3
SMR:Q0WNX3 PaxDb:Q0WNX3 PRIDE:Q0WNX3 EnsemblPlants:AT5G15270.1
EnsemblPlants:AT5G15270.2 GeneID:831379 KEGG:ath:AT5G15270
TAIR:At5g15270 HOGENOM:HOG000240086 InParanoid:Q0WNX3 OMA:IYSPSDE
PhylomeDB:Q0WNX3 ProtClustDB:CLSN2679973 Genevestigator:Q0WNX3
Uniprot:Q0WNX3
Length = 548
Score = 143 (55.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 55/228 (24%), Positives = 112/228 (49%)
Query: 207 PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK---AE 263
P K+G +IG+ GD ++ L+ ++ +KI+I +A P R + I + E
Sbjct: 57 PVKKIGSVIGRGGDIVKQLRNDTRSKIRI---GEAIPGCDERVITIYSPSDETNAFGDGE 113
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIK--VPNEKVGLIIGRGGETIKGL 321
K+++ +A +VA + + +QV K VP++++G I+GRGG+ ++ +
Sbjct: 114 KVLSPA-QDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNI 172
Query: 322 QTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTL--- 376
++ +GA+I+++ +++P + + +++++G++ ++ A I L + R L
Sbjct: 173 RSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSS 232
Query: 377 SGGFN-----QQAYRPRVPTGPPQWGPRGSHP---SQPMAYDYPQRGP 416
SGG+ A PR+ P G G S+P+ Y P+ P
Sbjct: 233 SGGYPAGSLMSHAGGPRLVGLAPLMGSYGRDAGDWSRPL-YQPPRNDP 279
Score = 49 (22.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 616 YP--YATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY 650
YP Y +SG + + Y YG AP S + P GY
Sbjct: 489 YPGGYGSSGVSAEGYSPYG-APVGGSSSTPYGVYGGY 524
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSY 582
Y G SG Y PYG P G+ Y
Sbjct: 489 YPGGYGSSGVSAEGYS--PYGAPVGGSSSTPY 518
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/40 (35%), Positives = 15/40 (37%)
Query: 635 PAPDSYNQPPASAPGYPQQAGQAVPNYPQP-GGQQAPSYG 673
P P Y SA GY P Y P GG + YG
Sbjct: 488 PYPGGYGSSGVSAEGYS-------P-YGAPVGGSSSTPYG 519
>FB|FBgn0028573 [details] [associations]
symbol:prc "pericardin" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=NAS] [GO:0007507
"heart development" evidence=IMP;TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0035088 "establishment or
maintenance of apical/basal cell polarity" evidence=TAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0002009
"morphogenesis of an epithelium" evidence=TAS] GO:GO:0002009
GO:GO:0007507 GO:GO:0005578 FlyBase:FBgn0028573 InterPro:IPR009765
Pfam:PF07054 EMBL:AF203342 STRING:Q9U617 PRIDE:Q9U617
InParanoid:Q9U617 ArrayExpress:Q9U617 Bgee:Q9U617 Uniprot:Q9U617
Length = 1729
Score = 152 (58.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 79/253 (31%), Positives = 87/253 (34%)
Query: 548 QPVY-SQGGL--QSGYHQHQYGKPP-------YGMPAQGTQPQSYXXXXXXXXXXXXXYQ 597
QP Y SQ G+ Q+G Q YG P G P GTQP Y
Sbjct: 499 QPGYGSQPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYGTQP----GIGAQTGAGQPGYG 554
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAP---APDSYNQPP-ASAPGYPQQ 653
SQ G P P G T P YG+ P A QP S PG Q
Sbjct: 555 SQPGIGGQTGAGQPGYGSQP-GIGGQTGAGQPGYGTQPGVGAQTGTGQPGYGSQPGVGTQ 613
Query: 654 AGQAVPNY-PQPG--GQQA---PSYGQVAPTAGYGQYTNTQQAYPEQPA------TSNAG 701
G P Y QPG GQ P YG P G GQ Q Y QP T G
Sbjct: 614 IGAGQPGYGSQPGIGGQTGAGQPGYGS-QPGIG-GQTGAAQPGYGTQPGVGAQTGTGQPG 671
Query: 702 YGYQ-GTQDXXXXXXXXXXXXXXXTGQPGYAQPA-ATQPSYD-QSASQSTAYGVAQGTAA 758
YG Q G GQ G QP TQP Q+ + YG G
Sbjct: 672 YGAQPGIGGQTGAGQPGYGRQPGIGGQTGPGQPGYGTQPGVGTQTGTGQPGYGAQPGIG- 730
Query: 759 AGYGKTVSPQPGY 771
G++ + QPGY
Sbjct: 731 ---GQSGAGQPGY 740
Score = 144 (55.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 74/247 (29%), Positives = 84/247 (34%)
Query: 542 GGHSNS-QPVY-SQGGL--QSGYHQHQYGKPP-------YGMPAQGTQPQSYXXXXXXXX 590
GG + + QP Y SQ G+ Q+G Q YG P G P GTQP
Sbjct: 254 GGQTGAGQPGYGSQPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYGTQP----GIGGQTG 309
Query: 591 XXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY 650
Y SQ G P P G T P YG+ P Q A PGY
Sbjct: 310 AGQPGYGSQPGIGGQTGAGQPGYGSQP-GIGGQTGAGQPGYGTQPGIGG--QTGAGQPGY 366
Query: 651 PQQAGQAVPNYP-QPG-GQQAPSYGQVAP-TAGYGQYTNTQQAYPEQPATSNAGYGYQ-G 706
Q G P QPG G Q GQ P GYG +Q Q GYG Q G
Sbjct: 367 GTQPGIGGQTGPGQPGYGTQPGIGGQTGPGQPGYG----SQPGIGGQTGAGQPGYGTQPG 422
Query: 707 TQDXXXXXXXXXXXXXXXTGQPGYAQPA-ATQPSYD-QSASQSTAYGVAQGTAAAGYGKT 764
Q G QP TQP Q+ + YG G +T
Sbjct: 423 IGGQTGAGQPGYGTQPGIGAQTGAGQPGYGTQPGIGGQTGAGQPGYGTQPGIGV----QT 478
Query: 765 VSPQPGY 771
+ QPGY
Sbjct: 479 GAGQPGY 485
Score = 144 (55.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 78/257 (30%), Positives = 85/257 (33%)
Query: 542 GGHSN-SQPVY-SQGGL--QSGYHQHQYGKPP-------YGMPAQGTQPQSYXXXXXXXX 590
GG + QP Y SQ G+ Q+G Q YG P G P GTQP
Sbjct: 390 GGQTGPGQPGYGSQPGIGGQTGAGQPGYGTQPGIGGQTGAGQPGYGTQP----GIGAQTG 445
Query: 591 XXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAP---APDSYNQPP-AS 646
Y +Q G P P T P YGS P A QP S
Sbjct: 446 AGQPGYGTQPGIGGQTGAGQPGYGTQP-GIGVQTGAGQPGYGSQPGIGAQTGAGQPGYGS 504
Query: 647 APGYPQQAGQAVPNY-PQPG--GQQA---PSYGQVAPTAGYGQYTNT-QQAYPEQPATSN 699
PG Q G P Y QPG GQ P YG P G G T Q Y QP
Sbjct: 505 QPGIGGQTGAGQPGYGSQPGIGGQTGAGQPGYG-TQP--GIGAQTGAGQPGYGSQPGIGG 561
Query: 700 -AGYGYQGTQDXXXXXXXXXXXXXXXTGQPGY-AQPAATQPSYDQSASQSTAYGVAQ--- 754
G G G QPG AQ QP Y T G Q
Sbjct: 562 QTGAGQPGYGSQPGIGGQTGAGQPGYGTQPGVGAQTGTGQPGYGSQPGVGTQIGAGQPGY 621
Query: 755 GTAAAGYGKTVSPQPGY 771
G+ G+T + QPGY
Sbjct: 622 GSQPGIGGQTGAGQPGY 638
>UNIPROTKB|E1BC70 [details] [associations]
symbol:VPS37C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009851
Pfam:PF07200 PROSITE:PS51314 KO:K12185 GeneTree:ENSGT00530000063123
CTD:55048 OMA:VERCQEQ EMBL:DAAA02063396 IPI:IPI00692039
RefSeq:NP_001193079.1 UniGene:Bt.105953 Ensembl:ENSBTAT00000010607
GeneID:613817 KEGG:bta:613817 NextBio:20898788 Uniprot:E1BC70
Length = 350
Score = 109 (43.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 33/90 (36%), Positives = 43/90 (47%)
Query: 598 SQVPSAQSYGP--NVPHQQQYPYATSGPTQQTYPSYGS-APAPDSYNQPP----ASAPGY 650
++ PS S+ P ++P + YP A +G + YP G AP+P QPP P Y
Sbjct: 256 TRAPSGYSWSPQRSMPPRPGYPVAPTGASGPGYPVVGGRAPSPGYPQQPPYLSTGGKPPY 315
Query: 651 PQQ---AGQAVPNYPQPGGQQAPSYGQVAP 677
P Q +G P YP PG AP YG P
Sbjct: 316 PTQPQPSGPLQPPYP-PG--PAPPYGFPPP 342
Score = 79 (32.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/58 (36%), Positives = 26/58 (44%)
Query: 390 PTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
P PP P G + P A D + P PS P YP LPY P + P ++ PP
Sbjct: 173 PRPPPPLHP-GPQTTPPPAEDAQPQPPQPSVVPPYP-LPYSPSPGMPVGPTAHGALPP 228
>MGI|MGI:108202 [details] [associations]
symbol:Pcbp2 "poly(rC) binding protein 2" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050687 "negative regulation of defense response
to virus" evidence=ISO] [GO:0051607 "defense response to virus"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:108202 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0003677 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0030529 GO:GO:0050687
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 OrthoDB:EOG46WZ8K CTD:5094 KO:K13162 OMA:CVVMLEL
ChiTaRS:PCBP2 EMBL:L19661 EMBL:X75947 EMBL:X97982 EMBL:AF236845
EMBL:AF236842 EMBL:AF236843 EMBL:AF236844 IPI:IPI00127707
IPI:IPI00221796 IPI:IPI00221799 PIR:S78515 RefSeq:NP_001096635.1
RefSeq:NP_001096636.1 RefSeq:NP_035172.2 UniGene:Mm.236513
ProteinModelPortal:Q61990 SMR:Q61990 IntAct:Q61990 STRING:Q61990
PhosphoSite:Q61990 REPRODUCTION-2DPAGE:Q61990 PaxDb:Q61990
PRIDE:Q61990 Ensembl:ENSMUST00000077037 Ensembl:ENSMUST00000078404
Ensembl:ENSMUST00000108838 GeneID:18521 KEGG:mmu:18521
UCSC:uc007xvy.2 UCSC:uc007xvz.2 UCSC:uc009vat.1 InParanoid:Q61990
NextBio:294276 Bgee:Q61990 CleanEx:MM_PCBP2 Genevestigator:Q61990
GermOnline:ENSMUSG00000056851 Uniprot:Q61990
Length = 362
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/239 (24%), Positives = 112/239 (46%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER + + G + I E +++ +L + T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 378 GGFNQQAYRPRVPTGPPQW-GPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
YRP+ + P + G + + + + +P P NP P Y Q
Sbjct: 178 -------YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQ 229
>UNIPROTKB|F1MA60 [details] [associations]
symbol:Ewsr1 "Protein Ewsr1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1307258
GO:GO:0005634 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 IPI:IPI00764664 Ensembl:ENSRNOT00000057382
ArrayExpress:F1MA60 Uniprot:F1MA60
Length = 661
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 72/275 (26%), Positives = 97/275 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+ A Q Y ++ +QP Y Q YG YG P + Q+
Sbjct: 10 SQAAAQQGYSAYT-AQPTQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQSTATXGQTAY 66
Query: 593 XXXYQSQVPSAQ--SYG---PNVPHQQQYP---YATSG---------PTQQTYPS---YG 632
Y Q P+ + S G P P P Y T TQ +Y + YG
Sbjct: 67 ATSY-GQPPTVEGTSTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG 125
Query: 633 SAPAPDSYNQPPAS-APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ----YTNT 687
+ PA +Y Q PA+ AP PQ G QP Q+ + G P+ GYGQ Y
Sbjct: 126 TQPAYPAYGQQPAATAPTRPQD-GNKPAETSQP---QSSTGGYNQPSLGYGQSNYSYPQV 181
Query: 688 QQAYPEQPATSNAGY---GYQGTQDXXXXXXXXXXXXXXXTGQPG-YAQPAA--TQPSYD 741
+YP QP T+ Y Y +Q GQP Y Q ++ Q SY
Sbjct: 182 PGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTY--GQPSSYGQQSSYGQQSSYG 239
Query: 742 QSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
Q T+Y G+ + + Y Q S
Sbjct: 240 QQPP--TSYPPQTGSYSQAPSQYSQQSSSYGQQSS 272
>UNIPROTKB|E2QUE1 [details] [associations]
symbol:PCBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
OMA:FWAPSVL EMBL:AAEX03016660 Ensembl:ENSCAFT00000018912
Uniprot:E2QUE1
Length = 371
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 64/237 (27%), Positives = 109/237 (45%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 99
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 100 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 152
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 153 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGS----HPSQPMAYDY--PQRGPYP---SQNPHYP 425
+ A P + G + +G HP Q Q+ P+P NP +P
Sbjct: 210 YR-PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFP 265
>UNIPROTKB|P57721 [details] [associations]
symbol:PCBP3 "Poly(rC)-binding protein 3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0016071 "mRNA metabolic process" evidence=NAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0016071
GO:GO:0003677 GO:GO:0003723 GO:GO:0030529 eggNOG:NOG315872
HOVERGEN:HBG053520 KO:K13162 EMBL:AF176329 EMBL:AK094301
EMBL:AJ011931 EMBL:AJ239328 EMBL:AL133492 EMBL:AL133493
EMBL:AL592528 EMBL:BC012061 IPI:IPI00027970 IPI:IPI00101278
IPI:IPI00167750 IPI:IPI00410586 IPI:IPI00410587
RefSeq:NP_001123613.1 RefSeq:NP_065389.2 UniGene:Hs.474049
ProteinModelPortal:P57721 SMR:P57721 IntAct:P57721
MINT:MINT-2862183 STRING:P57721 PhosphoSite:P57721 DMDM:296439262
PaxDb:P57721 PRIDE:P57721 Ensembl:ENST00000400308
Ensembl:ENST00000400309 Ensembl:ENST00000400310
Ensembl:ENST00000400314 Ensembl:ENST00000449640 GeneID:54039
KEGG:hsa:54039 UCSC:uc002zhp.2 UCSC:uc002zhq.2 UCSC:uc002zhs.2
CTD:54039 GeneCards:GC21P047063 HGNC:HGNC:8651 HPA:HPA030247
MIM:608502 neXtProt:NX_P57721 PharmGKB:PA32990 OMA:FWAPSVL
OrthoDB:EOG4XH00F ChiTaRS:PCBP3 GenomeRNAi:54039 NextBio:56330
ArrayExpress:P57721 Bgee:P57721 CleanEx:HS_PCBP3
Genevestigator:P57721 GermOnline:ENSG00000183570 Uniprot:P57721
Length = 371
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 64/237 (27%), Positives = 109/237 (45%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 99
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 100 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 152
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 153 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGS----HPSQPMAYDY--PQRGPYP---SQNPHYP 425
+ A P + G + +G HP Q Q+ P+P NP +P
Sbjct: 210 YR-PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFP 265
>MGI|MGI:1890470 [details] [associations]
symbol:Pcbp3 "poly(rC) binding protein 3" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:1890470 GO:GO:0005829 GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074311 eggNOG:NOG315872 HOGENOM:HOG000182823
HOVERGEN:HBG053520 KO:K13162 CTD:54039 OMA:FWAPSVL
OrthoDB:EOG4XH00F ChiTaRS:PCBP3 EMBL:AF176327 EMBL:AK034811
EMBL:AK079564 IPI:IPI00411074 IPI:IPI00411075 RefSeq:NP_067543.2
UniGene:Mm.272803 ProteinModelPortal:P57722 SMR:P57722
STRING:P57722 PhosphoSite:P57722 PaxDb:P57722 PRIDE:P57722
Ensembl:ENSMUST00000001148 Ensembl:ENSMUST00000105411
Ensembl:ENSMUST00000168465 GeneID:59093 KEGG:mmu:59093
UCSC:uc007fuz.2 UCSC:uc007fva.2 InParanoid:P57722 NextBio:314746
Bgee:P57722 CleanEx:MM_PCBP3 Genevestigator:P57722
GermOnline:ENSMUSG00000001120 Uniprot:P57722
Length = 371
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 64/237 (27%), Positives = 109/237 (45%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 99
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 100 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 152
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 153 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGS----HPSQPMAYDY--PQRGPYP---SQNPHYP 425
+ A P + G + +G HP Q Q+ P+P NP +P
Sbjct: 210 YR-PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFP 265
>UNIPROTKB|D4A1P3 [details] [associations]
symbol:Pcbp3 "Protein Pcbp3" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1307430 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0003723
EMBL:CH473988 OrthoDB:EOG4XH00F IPI:IPI00558998 UniGene:Rn.107537
Ensembl:ENSRNOT00000042120 Uniprot:D4A1P3
Length = 371
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 64/237 (27%), Positives = 109/237 (45%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 99
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 100 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 152
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER V ++G I + +++ +L + +T+
Sbjct: 153 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGS----HPSQPMAYDY--PQRGPYP---SQNPHYP 425
+ A P + G + +G HP Q Q+ P+P NP +P
Sbjct: 210 YR-PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFP 265
>FB|FBgn0030093 [details] [associations]
symbol:dalao "dalao" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=IC]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035060 "brahma complex" evidence=NAS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IGI;IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0045893 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0035060 HSSP:P07155 EMBL:AF348329 ProteinModelPortal:Q9BIW6
DIP:DIP-36731N IntAct:Q9BIW6 STRING:Q9BIW6 PRIDE:Q9BIW6
FlyBase:FBgn0030093 InParanoid:Q9BIW6 ArrayExpress:Q9BIW6
Bgee:Q9BIW6 Uniprot:Q9BIW6
Length = 749
Score = 101 (40.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 51/168 (30%), Positives = 57/168 (33%)
Query: 541 YGGHSNSQPVYSQGGLQSGYHQHQYG-KP---PYGMPAQGTQPQSYXXXXXXXXXXXXXY 596
YGG + P GG Y+Q QYG P PY P Q QSY
Sbjct: 577 YGGPPHGPPPGPPGGPARPYYQPQYGGHPTPQPYYAPFSPYQ-QSYGPPPGSHYMSPRPP 635
Query: 597 QSQV------PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDS-YNQPPASAPG 649
Q P A +G N P QQ P PS G AP A+APG
Sbjct: 636 PPQHNGNPGHPYAPEHGSNPPPPQQQQQQQPPPGHLHEPSGGGPGAPGGGAGAAAAAAPG 695
Query: 650 ---YPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQA-YPE 693
YP A P P PG G+ A G G T +PE
Sbjct: 696 AGVYPTPGAGAGPGAP-PGPAGGAPLGEAAVAGGVGPPAATALGKHPE 742
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/67 (37%), Positives = 29/67 (43%)
Query: 382 QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRS 441
QQ P P G PQ P HP + P GP+ P P LP PP +
Sbjct: 521 QQQGGPAPPPGMPQMHPHPGHPPPGHSLMPPHMGPHQPP-PGMPGLP----PPPPHTGYA 575
Query: 442 NYGGPPN 448
NYGGPP+
Sbjct: 576 NYGGPPH 582
>UNIPROTKB|F1PBJ4 [details] [associations]
symbol:FUS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 OMA:YGTQSTP EMBL:AAEX03004378
EMBL:AAEX03004379 Ensembl:ENSCAFT00000026694 Uniprot:F1PBJ4
Length = 517
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 60/176 (34%), Positives = 78/176 (44%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ S YGQ A
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSNQ-------PYGQQSYSGYGQSAD 46
Query: 678 TAGYGQ--YTNTQ-QAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ-- 732
T+GYGQ Y ++ Q T + GY G+ + PGY Q
Sbjct: 47 TSGYGQSSYGSSYGQTQNTGYGTQSTPQGY-GSTGGYGSSQGSQSSYGQQSSYPGYGQQP 105
Query: 733 -PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVS---PQPGYPQYDSTQMYAAPR 784
P++T SY S SQS+ YG Q + GYG+ Q GY Q S+ Y P+
Sbjct: 106 APSSTSGSYG-SGSQSSGYGQPQ---SGGYGQQSGYSGQQQGYGQQQSS--YNPPQ 155
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 52/164 (31%), Positives = 67/164 (40%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Y+Q QS Y + +P G Q QP Q SYG +
Sbjct: 6 YTQQATQS-YGAYPT-QPGQGYSQQSNQPYGQQSYSGYGQSADTSGYGQ----SSYGSSY 59
Query: 611 PHQQQYPYATSGPTQQTYPS---YGSAP-APDSYNQPPASAPGYPQQAGQAVPNYPQPGG 666
Q Y T T Q Y S YGS+ + SY Q +S PGY QQ + + G
Sbjct: 60 GQTQNTGYGTQS-TPQGYGSTGGYGSSQGSQSSYGQQ-SSYPGYGQQPAPSSTSGSYGSG 117
Query: 667 QQAPSYGQVAPTAGYGQ---YTNTQQAYPEQPATSNA--GYGYQ 705
Q+ YGQ + GYGQ Y+ QQ Y +Q ++ N GYG Q
Sbjct: 118 SQSSGYGQ-PQSGGYGQQSGYSGQQQGYGQQQSSYNPPQGYGQQ 160
>FB|FBgn0262737 [details] [associations]
symbol:mub "mushroom-body expressed" species:7227 "Drosophila
melanogaster" [GO:0017130 "poly(C) RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IC] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 EMBL:AE014296
GO:GO:0003723 GO:GO:0000381 GeneTree:ENSGT00550000074311 KO:K13162
EMBL:BT030417 RefSeq:NP_001163493.1 RefSeq:NP_001246873.1
UniGene:Dm.2502 SMR:A4IJ59 STRING:A4IJ59 EnsemblMetazoa:FBtr0301364
EnsemblMetazoa:FBtr0304980 GeneID:40436 KEGG:dme:Dmel_CG7437
CTD:40436 FlyBase:FBgn0262737 GenomeRNAi:40436 NextBio:818772
Uniprot:A4IJ59
Length = 557
Score = 110 (43.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 272 EADAGGSPSLVAR--G--LATAQASGAAEQV--EIKVPNEKVGLIIGRGGETIKGLQTRS 325
+++ G +P+ +A G L TA + A+Q E+ V N+ +G IIG+GG I ++ S
Sbjct: 256 QSNLGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQIS 315
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
GA I++ EG G+ +R + ++G+ + +AQ +I
Sbjct: 316 GAMIRISNCEEREG-GNTDRTITISGNPDSVALAQYLI 352
Score = 91 (37.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI- 356
+ + VP + G +IG+ G IK ++ +G IQ+ + LP S ER V ++G QI
Sbjct: 105 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPN---STERAVTLSGSAEQIT 161
Query: 357 EIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVP-TGP 393
+ ++ +L R +T+ YRP+ TGP
Sbjct: 162 QCIYQICLVMLESPPRGATIP-------YRPKPQVTGP 192
Score = 83 (34.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP ++ G LIGK+G I+ ++ +G IQ+ ++ P++ R V + G+ I +
Sbjct: 106 RLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQC 163
Query: 263 EKLINAVIAEADAGGS 278
I V+ E+ G+
Sbjct: 164 IYQICLVMLESPPRGA 179
Score = 80 (33.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+ + + SGAKI I+ D R V + GT +
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS-----DGSCPERIVTVSGTTNA 77
Query: 259 IDKAEKLINAVIAEA-DAG--GSPSLVARGLATAQASGA 294
I A LI E D G G + R + A G+
Sbjct: 78 IFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGS 116
>UNIPROTKB|J3QT27 [details] [associations]
symbol:PCBP3 "Poly(rC)-binding protein 3" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AJ011931 EMBL:AJ239328
EMBL:AL133492 EMBL:AL133493 EMBL:AL592528 HGNC:HGNC:8651
ChiTaRS:PCBP3 ProteinModelPortal:J3QT27 Ensembl:ENST00000400305
Uniprot:J3QT27
Length = 322
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ SGA+I I+ + + R V I G
Sbjct: 21 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS-----EGNCPERIVTITGPTDA 75
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I A E D S S AT++ V VP + G +IG+GG I
Sbjct: 76 IFKAFAMI-AYKFEEDIINSMS---NSPATSKPPVTLRLV---VPASQCGSLIGKGGSKI 128
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER V ++G I + +K++ + T+ G
Sbjct: 129 KEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII---QCVKQICVVMLEAYTIQG 182
Query: 379 GF 380
+
Sbjct: 183 QY 184
>ZFIN|ZDB-GENE-000308-1 [details] [associations]
symbol:igf2bp3 "insulin-like growth factor 2 mRNA
binding protein 3" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=ISS] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 Pfam:PF13014 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 ZFIN:ZDB-GENE-000308-1
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003730 HSSP:Q9Y6M1 HOVERGEN:HBG052725
KO:K13197 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OrthoDB:EOG405S0T CTD:10643 OMA:EAQDTKF
EMBL:AF161270 EMBL:BC045873 IPI:IPI00497892 RefSeq:NP_571566.1
UniGene:Dr.8280 ProteinModelPortal:Q9PW80 SMR:Q9PW80 PRIDE:Q9PW80
Ensembl:ENSDART00000010140 GeneID:30967 KEGG:dre:30967
InParanoid:Q9PW80 NextBio:20807119 ArrayExpress:Q9PW80 Bgee:Q9PW80
Uniprot:Q9PW80
Length = 582
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 52/168 (30%), Positives = 79/168 (47%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP-HAATRPVEIIGTLSNIDKAEK 264
+P VG +IGK G I+ L +GA I+I A AD A R V I G KA+
Sbjct: 415 IPALAVGAIIGKQGQHIKQLSRFAGASIKI---APADGIDAKQRMVIISGPPEAQFKAQG 471
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
I + E + G V + IKVP+ G +IG+GG+T+ LQ
Sbjct: 472 RIFGKLKEENFFGPKEEVKL------------EAHIKVPSFAAGRVIGKGGKTVNELQNL 519
Query: 325 SGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+ A + + P D + + +V++TG ++AQ I+E++SQ R
Sbjct: 520 TSAEVVVPRDQTP--DENDQVVVKITGHFYASQLAQRKIQEIISQVRR 565
Score = 98 (39.6 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 273 ADAGGSPSLVARGLATAQAS----GA---AEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
A G SPS+V+ AQA GA +E V + +P VG IIG+ G+ IK L +
Sbjct: 379 ASGGISPSVVSGPPPGAQAGYQSFGAQMESETVHLFIPALAVGAIIGKQGQHIKQLSRFA 438
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTG 351
GA I++ P +G +K+R+V ++G
Sbjct: 439 GASIKIAPA---DGIDAKQRMVIISG 461
Score = 88 (36.0 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + GTL KA
Sbjct: 279 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDACAKA 338
Query: 263 EKLINAVIAEA 273
E+ I + E+
Sbjct: 339 EEEIMKKVRES 349
>MGI|MGI:1890358 [details] [associations]
symbol:Igf2bp2 "insulin-like growth factor 2 mRNA binding
protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=ISO] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=ISO] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
MGI:MGI:1890358 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048027 GO:GO:0003730
HOVERGEN:HBG052725 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 CTD:10644 OrthoDB:EOG4FBHSJ ChiTaRS:IGF2BP2
GO:GO:0044430 EMBL:AY531659 EMBL:AK170531 EMBL:CT009567
IPI:IPI00338748 IPI:IPI00761863 RefSeq:NP_898850.2
UniGene:Mm.489442 ProteinModelPortal:Q5SF07 SMR:Q5SF07
STRING:Q5SF07 PhosphoSite:Q5SF07 REPRODUCTION-2DPAGE:Q5SF07
PaxDb:Q5SF07 PRIDE:Q5SF07 Ensembl:ENSMUST00000100052 GeneID:319765
KEGG:mmu:319765 UCSC:uc007yrz.1 UCSC:uc007ysb.1 InParanoid:A6X8Z4
OMA:KQQEQKH NextBio:395368 Bgee:Q5SF07 Genevestigator:Q5SF07
GermOnline:ENSMUSG00000033581 Uniprot:Q5SF07
Length = 592
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 66/252 (26%), Positives = 112/252 (44%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 190 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 247
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV--PNEKVGLIIGRGGETIKG 320
++I ++ + A + AE+V +K+ N VG +IG+ G +K
Sbjct: 248 CRMILEIMQKE---------------ADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKK 292
Query: 321 LQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV--- 371
++ +G +I + Q L + ER + V G + +IEI +++ +E +
Sbjct: 293 IEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKL-REAFENDMLAV 349
Query: 372 -RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL 427
+ + L G N A + + PP GPRG PS P + + Y S YPH
Sbjct: 350 NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPY-HPFATHSGYFSSL--YPHH 406
Query: 428 PYGNYPPQQMAP 439
+G +P P
Sbjct: 407 HFGPFPHHHSYP 418
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 427 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 484
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 485 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 532
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 533 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 574
>RGD|1305614 [details] [associations]
symbol:Igf2bp2 "insulin-like growth factor 2 mRNA binding
protein 2" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005856
"cytoskeleton" evidence=ISO] [GO:0044430 "cytoskeletal part"
evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 RGD:1305614
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 EMBL:CH473999
GeneTree:ENSGT00530000063171 CTD:10644 OrthoDB:EOG4FBHSJ
GO:GO:0044430 IPI:IPI00559516 RefSeq:NP_001257527.1
UniGene:Rn.17318 Ensembl:ENSRNOT00000036958 GeneID:303824
KEGG:rno:303824 UCSC:RGD:1305614 NextBio:652153 Uniprot:D3ZWZ6
Length = 592
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 69/253 (27%), Positives = 111/253 (43%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 190 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 247
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV--PNEKVGLIIGRGGETIKG 320
++I ++ + A + AE+V +K+ N VG +IG+ G +K
Sbjct: 248 CRMILEIMQKE---------------ADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKK 292
Query: 321 LQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
++ +G +I + Q L + ER + V G + A+ I + L + L+
Sbjct: 293 IEHETGTKITISSLQDL--SIYNPERTITVKGTIEACASAEMEIMKKLREAFENDMLA-- 348
Query: 380 FNQQAYR-PRV--------PTG----PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPH 426
NQQA P + TG PP GPRG+ PS P + + Y S YPH
Sbjct: 349 VNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPSPPY-HPFATHSGYFSSL--YPH 405
Query: 427 LPYGNYPPQQMAP 439
+G +P P
Sbjct: 406 HHFGPFPHHHSYP 418
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 427 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 484
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 485 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 532
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 533 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 574
>ZFIN|ZDB-GENE-070912-44 [details] [associations]
symbol:igf2bp2a "insulin-like growth factor 2 mRNA
binding protein 2a" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 ZFIN:ZDB-GENE-070912-44
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CR936497
HOVERGEN:HBG052725 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OrthoDB:EOG4FBHSJ EMBL:CT737147
IPI:IPI00865862 SMR:A9C3V8 Ensembl:ENSDART00000102419
Uniprot:A9C3V8
Length = 606
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 49/164 (29%), Positives = 78/164 (47%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A++ P R V I G KA+
Sbjct: 440 IPTQAVGAIIGKKGQHIKQLARFAGASIKIA-PAES-PDVTQRMVIITGPPEAQFKAQGR 497
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + TA+ E IKVP+ G +IG+GG+T+ LQ +
Sbjct: 498 IFGKLKEEN-----------FFTAKEEVKLE-THIKVPSSAAGRVIGKGGKTVNELQNLT 545
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D + E V+++G + AQ I+E++ Q
Sbjct: 546 SAEV-IVPRDQTP-DENDEVFVKISGHFFASQTAQRKIREIIQQ 587
>ZFIN|ZDB-GENE-060503-536 [details] [associations]
symbol:igf2bp2b "insulin-like growth factor 2 mRNA
binding protein 2b" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-060503-536
GO:GO:0003723 EMBL:CR382370 GeneTree:ENSGT00530000063171
EMBL:BX004885 IPI:IPI00919570 PRIDE:F1QN87
Ensembl:ENSDART00000088166 Bgee:F1QN87 Uniprot:F1QN87
Length = 446
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 49/164 (29%), Positives = 76/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG LIGK G I+ L + +GA I+I A P R V I G KA+
Sbjct: 279 IPTPAVGALIGKKGQHIKELAHFAGASIKIA--APESPDEPERMVIITGPPEAQFKAQGR 336
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + TA+ E IKVP+ G +IG+GG+T+ LQ +
Sbjct: 337 IYGKLKEEN-----------FFTAKEEVKLE-AHIKVPSTAAGRVIGKGGKTVNELQNLT 384
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D + + V++ G + AQ I+E++ Q
Sbjct: 385 SAEV-IVPRDQTP-DENDDVFVKIIGHFFASQTAQRKIREIVQQ 426
>UNIPROTKB|Q25460 [details] [associations]
symbol:FP1 "Adhesive plaque matrix protein" species:6550
"Mytilus edulis" [GO:0005576 "extracellular region" evidence=IDA]
InterPro:IPR002964 PRINTS:PR01216 GO:GO:0005576 EMBL:X54422
PIR:S23760 ProteinModelPortal:Q25460 Uniprot:Q25460
Length = 875
Score = 125 (49.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 47/187 (25%), Positives = 70/187 (37%)
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQA 654
Y S + SY P + YP PT + P+Y + P+ P +Y P+ P Y
Sbjct: 353 YPSTYKAKPSYPPTYKAKPSYP-----PTYKAKPTYKAKPSYPPTYKAKPSYPPTY---- 403
Query: 655 GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXX 714
+A P+YP P + P+Y + PT Y +T +A P P + A Y T
Sbjct: 404 -KAKPSYP-PTYKAKPTY-KAKPT-----YPSTYKAKPSYPPSYKAKPSYPPTYKAKPTY 455
Query: 715 XXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY-PQ 773
+P Y +PSY + ++Y + Y T P+ Y P
Sbjct: 456 KAKPTYPSTYKAKPSYPASYKAKPSYPPTYKSKSSYPSSYKPKKT-YPPTYKPKLTYKPT 514
Query: 774 YDSTQMY 780
Y Y
Sbjct: 515 YKPKPSY 521
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 59/252 (23%), Positives = 91/252 (36%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQ-SYXXXXXXXXX 591
++ P++ Y +N PVY ++ + PP +P+ +Y
Sbjct: 57 SYKPIKTTYNAKTNYPPVYKPKMTYPPTYKPKPSYPPTYKSKPTYKPKITYPPTYKAKPS 116
Query: 592 XXXXYQSQVPSAQSYGPNVPHQQQY-PYATSGPTQQTYPSYG-SAPAPDSYNQPPASAPG 649
Y+ + +Y P + + Y P + PT + PSY S +Y + P
Sbjct: 117 YPSSYKPKKTYPPTYKPKLTYPPTYKPKPSYPPTYKPKPSYPPSYKTKKTYPSSYKAKPS 176
Query: 650 YPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQD 709
YP +A P+YP P + PSY PT Y + T +A P P+T A Y T
Sbjct: 177 YPPTY-KAKPSYP-PTYKAKPSY---PPT--Y-KAKPTYKAKPTYPSTYKAKPSYPPTYK 228
Query: 710 XXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQP 769
+P Y +PSY + Y A+ T A T +P
Sbjct: 229 AKPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYK-AKPTYKAK--PTYKAKP 285
Query: 770 GYPQ-YDSTQMY 780
YP Y + Y
Sbjct: 286 SYPPTYKAKPSY 297
Score = 124 (48.7 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 58/223 (26%), Positives = 82/223 (36%)
Query: 567 KPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQ 626
KP Y A+ T P +Y Y + SY P + YP + +
Sbjct: 588 KPSY--KAKPTYPSTYKAKPS--------YPPTYKAKPSYPPTYKAKPSYP--PTYKAKP 635
Query: 627 TYPS-YGSAPA-PDSY----NQPPA--SAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPT 678
TYPS Y + P+ P +Y + PP + P YP +A P+YP P + P+Y + PT
Sbjct: 636 TYPSTYKAKPSYPPTYKPKISYPPTYKAKPSYPPTY-KAKPSYP-PTYKAKPTY-KAKPT 692
Query: 679 AGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQP 738
+T +A P P T A Y T +P Y +P
Sbjct: 693 N-----PSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYKAKPTYPSTYKAKP 747
Query: 739 SYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQ-YDSTQMY 780
+Y + Y A Y T P+P YP Y S +Y
Sbjct: 748 TYKAKPTYPPTY-----KAKPSYPPTYKPKPSYPPTYKSKSIY 785
Score = 119 (46.9 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 49/189 (25%), Positives = 65/189 (34%)
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPA--SAPGYPQQ 653
Y + SY P + YP PT + P+Y + P +Y P + P YP
Sbjct: 239 YPPTYKAKPSYPPTYKAKPSYP-----PTYKAKPTYKAKP---TYKAKPTYKAKPSYPPT 290
Query: 654 AGQAVPNYPQPGGQQAPSYGQVAPT-AGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
+A P+YP P + PSY PT Y T +A P P T A Y T
Sbjct: 291 Y-KAKPSYP-PTYKAKPSY---PPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKP 345
Query: 713 XXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYP 772
+P Y +PSY + Y A Y T +P YP
Sbjct: 346 TYKAKPTYPSTYKAKPSYPPTYKAKPSYPPTYKAKPTY-----KAKPSYPPTYKAKPSYP 400
Query: 773 Q-YDSTQMY 780
Y + Y
Sbjct: 401 PTYKAKPSY 409
Score = 104 (41.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 56/235 (23%), Positives = 80/235 (34%)
Query: 547 SQPVY-SQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQS 605
++P Y S + Y KP Y P +P SY Y+++ +
Sbjct: 593 AKPTYPSTYKAKPSYPPTYKAKPSYP-PTYKAKP-SYPPTYKAKPTYPSTYKAKPSYPPT 650
Query: 606 YGPNVPHQQQYPYATS-GPTQQTYPSYGSA-PAPDSYNQPPASA------PGYPQQAGQA 657
Y P + + Y S PT + PSY A +Y P + P YP +A
Sbjct: 651 YKPKISYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYKAKPTNPSTYKAKPSYPPTY-KA 709
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
P+YP P + PSY PT Y + T +A P P+T A Y+
Sbjct: 710 KPSYP-PTYKAKPSY---PPT--Y-KAKPTYKAKPTYPSTYKAKPTYKAKPTYPPTYKAK 762
Query: 718 XXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYP 772
+P Y ++ Y S Y Y T P+P YP
Sbjct: 763 PSYPPTYKPKPSYPPTYKSKSIYPSSYKPKKTYPPTYKPKLT-YPPTYKPKPSYP 816
Score = 102 (41.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 51/204 (25%), Positives = 71/204 (34%)
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASAPGYPQQA 654
Y + SY P + YP PT + PSY + P P +Y P+ P Y +
Sbjct: 561 YPPTYKAKPSYPPTYKAKPSYP-----PTYKAKPSYKAKPTYPSTYKAKPSYPPTYKAKP 615
Query: 655 G-----QAVPNYPQPGGQQAPSYG---QVAPT--AGYG---QYTNTQQAYPEQPATSNAG 701
+A P+YP P + P+Y + P+ Y Y T +A P P T A
Sbjct: 616 SYPPTYKAKPSYP-PTYKAKPTYPSTYKAKPSYPPTYKPKISYPPTYKAKPSYPPTYKAK 674
Query: 702 YGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGV---AQGT-- 756
Y T +P Y +PSY + +Y A+ T
Sbjct: 675 PSYPPTYKAKPTYKAKPTNPSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYK 734
Query: 757 AAAGYGKTVSPQPGY---PQYDST 777
A Y T +P Y P Y T
Sbjct: 735 AKPTYPSTYKAKPTYKAKPTYPPT 758
Score = 102 (41.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 54/240 (22%), Positives = 80/240 (33%)
Query: 547 SQPVY-SQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXX--XYQSQVPSA 603
++P Y S + Y KP Y P +P +Y Y + +
Sbjct: 421 AKPTYPSTYKAKPSYPPSYKAKPSYP-PTYKAKP-TYKAKPTYPSTYKAKPSYPASYKAK 478
Query: 604 QSYGPNVPHQQQYPYATSGPTQQTYP-SYG-SAPAPDSYNQPPASAPGYPQQAGQAVPNY 661
SY P + YP +S ++TYP +Y +Y P+ P Y + P Y
Sbjct: 479 PSYPPTYKSKSSYP--SSYKPKKTYPPTYKPKLTYKPTYKPKPSYPPSYKPKTTYP-PTY 535
Query: 662 PQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXX 721
+P P+Y + P+ Y T +A P P T A Y T
Sbjct: 536 -KPKISYPPTY-KAKPS-----YPATYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAK 588
Query: 722 XXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQ-YDSTQMY 780
+P Y +PSY + +Y A Y T +P YP Y + Y
Sbjct: 589 PSYKAKPTYPSTYKAKPSYPPTYKAKPSYPPTY-KAKPSYPPTYKAKPTYPSTYKAKPSY 647
Score = 71 (30.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 385 YRPRVPTGPPQWGPRGSHP-SQPMAYDYPQR-GPYPSQNPHYPHLPYGNYPPQQMAPRSN 442
Y+P+ P+ PP + P+ S+P S YP PS P Y P +YPP A + +
Sbjct: 141 YKPK-PSYPPTYKPKPSYPPSYKTKKTYPSSYKAKPSYPPTYKAKP--SYPPTYKA-KPS 196
Query: 443 YGGPP 447
Y PP
Sbjct: 197 Y--PP 199
Score = 69 (29.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 385 YRPRVPTGPPQWGPRGSHP-SQPMAYDYPQRGPYP---SQNPHYP--HLPYGNYPPQQMA 438
Y+P++ T PP + P+ S+P + Y + YP P YP + P YPP
Sbjct: 75 YKPKM-TYPPTYKPKPSYPPTYKSKPTYKPKITYPPTYKAKPSYPSSYKPKKTYPPTYK- 132
Query: 439 PRSNYGGPP 447
P+ Y PP
Sbjct: 133 PKLTY--PP 139
Score = 65 (27.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPS--QPMAYDYPQRGPYPSQNPHYPHLPYG 430
PST + A P+ PP + + S+PS +P P P + P Y P
Sbjct: 462 PSTYKAKPSYPASYKAKPSYPPTYKSKSSYPSSYKPKKTYPPTYKPKLTYKPTYKPKP-- 519
Query: 431 NYPPQQMAPRSNYGGPP 447
+YPP P++ Y PP
Sbjct: 520 SYPPSYK-PKTTY--PP 533
Score = 56 (24.8 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG 444
Y+ + P+ PP + + ++ ++P P PS P Y P +YPP A + +Y
Sbjct: 253 YKAK-PSYPPTYKAKPTYKAKPTYKAKPTYKAKPSYPPTYKAKP--SYPPTYKA-KPSY- 307
Query: 445 GPP 447
PP
Sbjct: 308 -PP 309
>UNIPROTKB|J9P8W8 [details] [associations]
symbol:PCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311
EMBL:AAEX03014817 Ensembl:ENSCAFT00000021540 OMA:QTSSHEM
Uniprot:J9P8W8
Length = 315
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 61/236 (25%), Positives = 110/236 (46%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGAGINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E + + +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMIIDKLEEVISSSMTN------STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + I E +K++ + P S
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSII---ECVKQICVVMLDPP--SK 172
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQ---PMAYDYPQRGPYPSQNPHYPHLPYGN 431
G YRP+ P+ P G+ Q P D + Q H+P + +GN
Sbjct: 173 GVTIP-YRPK-PSSSPVIFAGGTIQGQYAIPQP-DLTKLHQLAMQQSHFP-MTHGN 224
>UNIPROTKB|Q5E9A3 [details] [associations]
symbol:PCBP1 "Poly(rC)-binding protein 1" species:9913 "Bos
taurus" [GO:0003697 "single-stranded DNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 GO:GO:0003697
GO:GO:0030529 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
EMBL:BT021017 IPI:IPI00687560 RefSeq:NP_001015565.1 UniGene:Bt.4620
ProteinModelPortal:Q5E9A3 SMR:Q5E9A3 MINT:MINT-6732977
STRING:Q5E9A3 PRIDE:Q5E9A3 Ensembl:ENSBTAT00000011824 GeneID:509917
KEGG:bta:509917 CTD:5093 HOGENOM:HOG000182823 HOVERGEN:HBG053520
InParanoid:Q5E9A3 KO:K12889 OMA:RNISERN OrthoDB:EOG46WZ8K
NextBio:20869194 Uniprot:Q5E9A3
Length = 356
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E D S + +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMIIDKLEE-DINSSMTN-----STA-ASRPPVTLRLVVPATQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + + + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSP-QG 176
Query: 379 GFNQQAYRPRVPTGPP 394
Y+P +P P
Sbjct: 177 RVMTIPYQP-MPASSP 191
>UNIPROTKB|J9P7Y9 [details] [associations]
symbol:PCBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311 CTD:5093
KO:K12889 OMA:RNISERN EMBL:AAEX03007630 RefSeq:XP_538537.1
Ensembl:ENSCAFT00000005324 GeneID:481417 KEGG:cfa:481417
Uniprot:J9P7Y9
Length = 356
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E D S + +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMIIDKLEE-DINSSMTN-----STA-ASRPPVTLRLVVPATQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + + + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSP-QG 176
Query: 379 GFNQQAYRPRVPTGPP 394
Y+P +P P
Sbjct: 177 RVMTIPYQP-MPASSP 191
>UNIPROTKB|Q15365 [details] [associations]
symbol:PCBP1 "Poly(rC)-binding protein 1" species:9606
"Homo sapiens" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0016071 "mRNA metabolic process" evidence=NAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005737 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0003723 GO:GO:0003697 GO:GO:0030529 GO:GO:0000398
eggNOG:NOG315872 CTD:5093 HOGENOM:HOG000182823 HOVERGEN:HBG053520
KO:K12889 OMA:RNISERN OrthoDB:EOG46WZ8K EMBL:X78137 EMBL:U24223
EMBL:Z29505 EMBL:BC039742 IPI:IPI00016610 RefSeq:NP_006187.2
UniGene:Hs.2853 PDB:1WVN PDB:1ZTG PDB:3VKE PDBsum:1WVN PDBsum:1ZTG
PDBsum:3VKE ProteinModelPortal:Q15365 SMR:Q15365 DIP:DIP-38136N
IntAct:Q15365 MINT:MINT-96267 STRING:Q15365 PhosphoSite:Q15365
DMDM:42560548 OGP:Q15365 REPRODUCTION-2DPAGE:IPI00016610
UCD-2DPAGE:Q15365 PaxDb:Q15365 PeptideAtlas:Q15365 PRIDE:Q15365
DNASU:5093 Ensembl:ENST00000303577 GeneID:5093 KEGG:hsa:5093
UCSC:uc002sgf.3 GeneCards:GC02P070314 HGNC:HGNC:8647 HPA:CAB037113
MIM:601209 neXtProt:NX_Q15365 PharmGKB:PA32986 InParanoid:Q15365
PhylomeDB:Q15365 ChiTaRS:PCBP1 EvolutionaryTrace:Q15365
GenomeRNAi:5093 NextBio:19644 ArrayExpress:Q15365 Bgee:Q15365
CleanEx:HS_PCBP1 Genevestigator:Q15365 GermOnline:ENSG00000169564
Uniprot:Q15365
Length = 356
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E D S + +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMIIDKLEE-DINSSMTN-----STA-ASRPPVTLRLVVPATQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + + + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSP-QG 176
Query: 379 GFNQQAYRPRVPTGPP 394
Y+P +P P
Sbjct: 177 RVMTIPYQP-MPASSP 191
>UNIPROTKB|I3LEC2 [details] [associations]
symbol:PCBP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GO:GO:0003697 GeneTree:ENSGT00550000074311 KO:K12889
OMA:RNISERN EMBL:CU928518 RefSeq:XP_003125105.1
Ensembl:ENSSSCT00000028976 GeneID:100511501 KEGG:ssc:100511501
Uniprot:I3LEC2
Length = 356
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E D S + +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMIIDKLEE-DINSSMTN-----STA-ASRPPVTLRLVVPATQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + + + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSP-QG 176
Query: 379 GFNQQAYRPRVPTGPP 394
Y+P +P P
Sbjct: 177 RVMTIPYQP-MPASSP 191
>MGI|MGI:1345635 [details] [associations]
symbol:Pcbp1 "poly(rC) binding protein 1" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=ISO;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=TAS] [GO:0008494 "translation activator
activity" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=TAS] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:1345635 GO:GO:0005634
GO:GO:0006397 GO:GO:0003723 GO:GO:0008494 GO:GO:0003697
GO:GO:0030529 GeneTree:ENSGT00550000074311 eggNOG:NOG315872
CTD:5093 HOGENOM:HOG000182823 HOVERGEN:HBG053520 KO:K12889
OMA:RNISERN OrthoDB:EOG46WZ8K ChiTaRS:PCBP1 EMBL:AF139894
EMBL:AF139895 EMBL:BC069915 EMBL:BC004793 IPI:IPI00128904
RefSeq:NP_035995.1 UniGene:Mm.274146 ProteinModelPortal:P60335
SMR:P60335 IntAct:P60335 STRING:P60335 PhosphoSite:P60335
REPRODUCTION-2DPAGE:IPI00128904 REPRODUCTION-2DPAGE:P60335
PaxDb:P60335 PRIDE:P60335 Ensembl:ENSMUST00000053015 GeneID:23983
KEGG:mmu:23983 InParanoid:P60335 NextBio:303869 Bgee:P60335
CleanEx:MM_PCBP1 Genevestigator:P60335
GermOnline:ENSMUSG00000051695 Uniprot:P60335
Length = 356
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E D S + +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMIIDKLEE-DINSSMTN-----STA-ASRPPVTLRLVVPATQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + + + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSP-QG 176
Query: 379 GFNQQAYRPRVPTGPP 394
Y+P +P P
Sbjct: 177 RVMTIPYQP-MPASSP 191
>RGD|1561319 [details] [associations]
symbol:Pcbp1 "poly(rC) binding protein 1" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:1561319 GO:GO:0003723 GO:GO:0003697 OMA:RNISERN
OrthoDB:EOG46WZ8K IPI:IPI00882480 ProteinModelPortal:D3ZS68
SMR:D3ZS68 PRIDE:D3ZS68 Ensembl:ENSRNOT00000023806 UCSC:RGD:1561319
Uniprot:D3ZS68
Length = 356
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/196 (26%), Positives = 97/196 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINIS-----EGNCPERIITLTGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I + E D S + +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMIIDKLEE-DINSSMTN-----STA-ASRPPVTLRLVVPATQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K ++ +GA++Q+ LP S ER + + G + + + I V+ +T+ S G
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSP-QG 176
Query: 379 GFNQQAYRPRVPTGPP 394
Y+P +P P
Sbjct: 177 RVMTIPYQP-MPASSP 191
>UNIPROTKB|G3V0E8 [details] [associations]
symbol:PCBP2 "Poly(RC) binding protein 2, isoform CRA_f"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:CH471054 GO:GO:0003723 EMBL:AC068889
EMBL:AC023509 RefSeq:NP_001122386.1 UniGene:Hs.546271 GeneID:5094
KEGG:hsa:5094 CTD:5094 HGNC:HGNC:8648 KO:K13162 ChiTaRS:PCBP2
GenomeRNAi:5094 NextBio:19648 ProteinModelPortal:G3V0E8 SMR:G3V0E8
PRIDE:G3V0E8 Ensembl:ENST00000437231 Ensembl:ENST00000455667
ArrayExpress:G3V0E8 Bgee:G3V0E8 Uniprot:G3V0E8
Length = 318
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 60/239 (25%), Positives = 113/239 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER + + G + I E +++ +L + T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG-----PYPSQNPHYPHLPYGN 431
YRP+ + P + ++ Q Y PQ Q H+P + +GN
Sbjct: 178 -------YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFP-MTHGN 227
>ZFIN|ZDB-GENE-041221-3 [details] [associations]
symbol:prnprs3 "prion protein, related sequence 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005544 "calcium-dependent phospholipid binding"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0048854
"brain morphogenesis" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0007156 "homophilic cell adhesion" evidence=IDA]
[GO:0021731 "trigeminal motor nucleus development" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
InterPro:IPR001464 InterPro:IPR022416 ZFIN:ZDB-GENE-041221-3
GO:GO:0005886 GO:GO:0042981 GO:GO:0051260 GO:GO:0005509
GO:GO:0007156 GO:GO:0005544 PANTHER:PTHR10502 GO:GO:0048854
Gene3D:1.10.790.10 SUPFAM:SSF54098 HOVERGEN:HBG056090 EMBL:AJ620614
IPI:IPI00679275 RefSeq:NP_001013316.1 UniGene:Dr.162496
UniGene:Dr.84038 ProteinModelPortal:Q5K4F8 GeneID:503702
KEGG:dre:503702 CTD:503702 InParanoid:Q5K4F8 NextBio:20866258
ArrayExpress:Q5K4F8 GO:GO:0021731 Uniprot:Q5K4F8
Length = 567
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 67/259 (25%), Positives = 86/259 (33%)
Query: 533 NHAPVQHP-YGGHSNSQPVYSQGGLQSGY-HQHQY-GKPPY----GMPAQGTQPQSYXXX 585
N P +P GG Q Y G GY +Q Y G+ Y G PAQG P
Sbjct: 84 NQNPPPYPGAGGGYPGQGRYPPAGSNPGYPNQGSYPGRAGYPNQGGYPAQGGYPAQGGYP 143
Query: 586 XXXXXXXXXXYQSQ--VPSAQSYGP-NVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ 642
Y +Q P+ Y N P + YP P Q YP S P + +
Sbjct: 144 AQGGYPAQGGYPAQGGYPAQGGYPQGNYPGRSGYPGQGGYPAQGGYPGGASYPGAGAGSY 203
Query: 643 PPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPE-QPATSNAG 701
P G P G + P YP GG +G G G Y Q YP P
Sbjct: 204 PNRYPGGNPYPVGGSYPGYPVRGGSSPNQFG--GGVGGAGGYPGAAQ-YPNWNPNNKIMS 260
Query: 702 YGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGY 761
Y G G G A P+ + + A + G G A GY
Sbjct: 261 PAYGGNYGGYGYGGRSPFAQSVQ-GM-GMA-PSYKSKGFGKQAIIAAGAGAVAGMAL-GY 316
Query: 762 GKTVSPQPGYPQYDSTQMY 780
G P+P + ++ + Y
Sbjct: 317 GLGSFPRPRFHFHNPQEEY 335
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 52/172 (30%), Positives = 61/172 (35%)
Query: 608 PNVPHQQQYPYATSG---PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQ-AVPNYPQ 663
P VP+Q PY +G P Q YP GS P + P A GYP Q G A YP
Sbjct: 80 PQVPNQNPPPYPGAGGGYPGQGRYPPAGSNPGYPNQGSYPGRA-GYPNQGGYPAQGGYPA 138
Query: 664 PGGQQAPSYGQVAPTAGY---GQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXX 720
GG P+ G GY G Y Q YP+ +GY QG
Sbjct: 139 QGGY--PAQGGYPAQGGYPAQGGYP-AQGGYPQGNYPGRSGYPGQGGYPAQGGYPGGASY 195
Query: 721 XXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYP 772
G P P Y S Y V G++ +G V GYP
Sbjct: 196 PGAGAGSYPNRYPGGN-P-YPVGGSYP-GYPVRGGSSPNQFGGGVGGAGGYP 244
>UNIPROTKB|E2RCF9 [details] [associations]
symbol:PCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00550000074311 CTD:5094
KO:K13162 OMA:CVVMLEL EMBL:AAEX03014980 RefSeq:XP_857995.1
ProteinModelPortal:E2RCF9 Ensembl:ENSCAFT00000010996 GeneID:477596
KEGG:cfa:477596 Uniprot:E2RCF9
Length = 331
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 60/239 (25%), Positives = 113/239 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINIS-----EGNCPERIITLAGPTNA 67
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I KA +I I + + S S+ +TA AS + + VP + G +IG+GG I
Sbjct: 68 IFKAFAMI---IDKLEEDISSSMTN---STA-ASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-EIAQEMIKEVLSQTVRPSTLS 377
K ++ +GA++Q+ LP S ER + + G + I E +++ +L + T+
Sbjct: 121 KEIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIP 177
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG-----PYPSQNPHYPHLPYGN 431
YRP+ + P + ++ Q Y PQ Q H+P + +GN
Sbjct: 178 -------YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFP-MTHGN 227
>MGI|MGI:1353633 [details] [associations]
symbol:Fus "fused in sarcoma" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 MGI:MGI:1353633
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG240581 KO:K13098 HOGENOM:HOG000038010 CTD:2521
ChiTaRS:FUS OrthoDB:EOG4DV5NH OMA:YGTQSTP EMBL:AF224264
IPI:IPI00117063 RefSeq:NP_631888.1 UniGene:Mm.277680
ProteinModelPortal:P56959 SMR:P56959 IntAct:P56959 MINT:MINT-136330
STRING:P56959 PhosphoSite:P56959 PaxDb:P56959 PRIDE:P56959
Ensembl:ENSMUST00000106251 GeneID:233908 KEGG:mmu:233908
HOVERGEN:HBG094940 InParanoid:P56959 NextBio:381951 Bgee:P56959
Genevestigator:P56959 GermOnline:ENSMUSG00000030795 Uniprot:P56959
Length = 518
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 60/176 (34%), Positives = 79/176 (44%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ S YGQ A
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSSQ-------PYGQQSYSGYGQSAD 46
Query: 678 TAGYGQ--YTNTQ-QAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ-- 732
T+GYGQ Y ++ Q T +A GY G+ + PGY Q
Sbjct: 47 TSGYGQSSYGSSYGQTQNTGYGTQSAPQGY-GSTGGYGSSQSSQSSYGQQSSYPGYGQQP 105
Query: 733 -PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVS---PQPGYPQYDSTQMYAAPR 784
P++T SY S SQS++YG Q + GYG+ Q Y Q S+ Y P+
Sbjct: 106 APSSTSGSYGGS-SQSSSYGQPQ---SGGYGQQSGYGGQQQSYGQQQSS--YNPPQ 155
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 54/165 (32%), Positives = 70/165 (42%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Y+Q QS Y + +P G Q +QP Q SYG +
Sbjct: 6 YTQQATQS-YGAYPT-QPGQGYSQQSSQPYGQQSYSGYGQSADTSGYGQ----SSYGSSY 59
Query: 611 PHQQQYPYAT-SGPTQQTYPS---YGSAPAPDS-YNQPPASAPGYPQQAGQAVPNYPQPG 665
Q Y T S P Q Y S YGS+ + S Y Q +S PGY QQ + + G
Sbjct: 60 GQTQNTGYGTQSAP--QGYGSTGGYGSSQSSQSSYGQQ-SSYPGYGQQPAPSSTSGSYGG 116
Query: 666 GQQAPSYGQVAPTAGYGQ---YTNTQQAYPEQPATSNA--GYGYQ 705
Q+ SYGQ + GYGQ Y QQ+Y +Q ++ N GYG Q
Sbjct: 117 SSQSSSYGQ-PQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQ 160
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 51/164 (31%), Positives = 65/164 (39%)
Query: 602 SAQSYG--PNVPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPP-ASAPGYPQQAGQA 657
+ QSYG P P Q Y +S P QQ+Y YG + Y Q S+ G Q G
Sbjct: 10 ATQSYGAYPTQPGQG-YSQQSSQPYGQQSYSGYGQSADTSGYGQSSYGSSYGQTQNTGYG 68
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
+ PQ YG T GYG ++Q +Y +Q +S GYG Q
Sbjct: 69 TQSAPQ-------GYGS---TGGYGSSQSSQSSYGQQ--SSYPGYGQQPAPSSTSGSYGG 116
Query: 718 XXXXXXXTGQP---GYAQPAA---TQPSYDQSASQSTAYGVAQG 755
GQP GY Q + Q SY Q Q ++Y QG
Sbjct: 117 SSQSSSY-GQPQSGGYGQQSGYGGQQQSYGQ---QQSSYNPPQG 156
>RGD|1308864 [details] [associations]
symbol:Fus "fused in sarcoma" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 RGD:1308864
GO:GO:0000166 EMBL:CH473956 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 eggNOG:NOG240581
GeneTree:ENSGT00530000063105 KO:K13098 HOGENOM:HOG000038010
CTD:2521 OrthoDB:EOG4DV5NH OMA:YGTQSTP EMBL:BC087153
RefSeq:NP_001012137.1 UniGene:Rn.100218 STRING:Q5PQK2
Ensembl:ENSRNOT00000031891 GeneID:317385 KEGG:rno:317385
UCSC:RGD:1308864 InParanoid:Q5PQK2 NextBio:671703
Genevestigator:Q5PQK2 Uniprot:Q5PQK2
Length = 518
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 60/176 (34%), Positives = 79/176 (44%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ S YGQ A
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSNQ-------PYGQQSYSGYGQSAD 46
Query: 678 TAGYGQ--YTNTQ-QAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ-- 732
T+GYGQ Y ++ Q T +A GY G+ + PGY Q
Sbjct: 47 TSGYGQSSYGSSYGQTQNTGYGTQSAPQGY-GSTGGYGSSQSSQSSYGQQSSYPGYGQQP 105
Query: 733 -PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVS---PQPGYPQYDSTQMYAAPR 784
P++T SY S SQS++YG Q + GYG+ Q Y Q S+ Y P+
Sbjct: 106 APSSTSGSYGGS-SQSSSYGQPQ---SGGYGQQSGYGGQQQSYGQQQSS--YNPPQ 155
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 54/165 (32%), Positives = 69/165 (41%)
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNV 610
Y+Q QS Y + +P G Q QP Q SYG +
Sbjct: 6 YTQQATQS-YGAYPT-QPGQGYSQQSNQPYGQQSYSGYGQSADTSGYGQ----SSYGSSY 59
Query: 611 PHQQQYPYAT-SGPTQQTYPS---YGSAPAPDS-YNQPPASAPGYPQQAGQAVPNYPQPG 665
Q Y T S P Q Y S YGS+ + S Y Q +S PGY QQ + + G
Sbjct: 60 GQTQNTGYGTQSAP--QGYGSTGGYGSSQSSQSSYGQQ-SSYPGYGQQPAPSSTSGSYGG 116
Query: 666 GQQAPSYGQVAPTAGYGQ---YTNTQQAYPEQPATSNA--GYGYQ 705
Q+ SYGQ + GYGQ Y QQ+Y +Q ++ N GYG Q
Sbjct: 117 SSQSSSYGQ-PQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQ 160
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 50/164 (30%), Positives = 65/164 (39%)
Query: 602 SAQSYG--PNVPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPP-ASAPGYPQQAGQA 657
+ QSYG P P Q Y ++ P QQ+Y YG + Y Q S+ G Q G
Sbjct: 10 ATQSYGAYPTQPGQG-YSQQSNQPYGQQSYSGYGQSADTSGYGQSSYGSSYGQTQNTGYG 68
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXX 717
+ PQ YG T GYG ++Q +Y +Q +S GYG Q
Sbjct: 69 TQSAPQ-------GYGS---TGGYGSSQSSQSSYGQQ--SSYPGYGQQPAPSSTSGSYGG 116
Query: 718 XXXXXXXTGQP---GYAQPAA---TQPSYDQSASQSTAYGVAQG 755
GQP GY Q + Q SY Q Q ++Y QG
Sbjct: 117 SSQSSSY-GQPQSGGYGQQSGYGGQQQSYGQ---QQSSYNPPQG 156
>FB|FBgn0262126 [details] [associations]
symbol:gho "ghost" species:7227 "Drosophila melanogaster"
[GO:0004252 "serine-type endopeptidase activity" evidence=ISS]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IDA] [GO:0035158 "regulation of tube diameter, open
tracheal system" evidence=IMP] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0070971 "endoplasmic reticulum exit site"
evidence=IDA] [GO:0003331 "positive regulation of extracellular
matrix constituent secretion" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0048081
"positive regulation of cuticle pigmentation" evidence=IMP]
[GO:0030011 "maintenance of cell polarity" evidence=IMP]
[GO:0007030 "Golgi organization" evidence=IMP] [GO:0016203 "muscle
attachment" evidence=IMP] [GO:0035149 "lumen formation, open
tracheal system" evidence=IMP] [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0040003 "chitin-based cuticle
development" evidence=IMP] [GO:0022409 "positive regulation of
cell-cell adhesion" evidence=IMP] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0000902 "cell morphogenesis" evidence=IMP]
InterPro:IPR006895 InterPro:IPR006896 InterPro:IPR006900
Pfam:PF04810 Pfam:PF04811 Pfam:PF04815 GO:GO:0006886 EMBL:AE014134
GO:GO:0008360 GO:GO:0005811 GO:GO:0008270 GO:GO:0009306
GO:GO:0016787 GO:GO:0016203 GO:GO:0000902 InterPro:IPR007123
Pfam:PF00626 GO:GO:0006888 GO:GO:0040003 GO:GO:0034394
GO:GO:0003331 GO:GO:0071711 GO:GO:0007030 GO:GO:0007029
GO:GO:0030011 GO:GO:0035158 GO:GO:0022409 GO:GO:0035149
GO:GO:0030127 SUPFAM:SSF82919 GO:GO:0070971 InterPro:IPR012990
Pfam:PF08033 SUPFAM:SSF81811 eggNOG:COG5028 KO:K14007
GeneTree:ENSGT00590000082962 HSSP:P40482 OMA:QDQGNCN GO:GO:0048081
EMBL:AY052042 RefSeq:NP_608664.2 UniGene:Dm.269 SMR:Q9VQ94
IntAct:Q9VQ94 MINT:MINT-283494 STRING:Q9VQ94
EnsemblMetazoa:FBtr0077810 EnsemblMetazoa:FBtr0329964 GeneID:33409
KEGG:dme:Dmel_CG10882 UCSC:CG10882-RA CTD:33409 FlyBase:FBgn0262126
InParanoid:Q9VQ94 OrthoDB:EOG4CVDNW GenomeRNAi:33409 NextBio:783418
Uniprot:Q9VQ94
Length = 1193
Score = 120 (47.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 55/178 (30%), Positives = 64/178 (35%)
Query: 530 YDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXX 589
Y P Q G QP Q Q G+ Q G PP P QP +
Sbjct: 256 YTQPGLPPQQQQGIPPLQQPGIPQQ--QPGFPPQQPGLPPLSQPGLPPQPGA-PYGAPQQ 312
Query: 590 XXXXXXYQSQVPSA-QSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA-PDSYNQPPASA 647
+ Q P P +P QQ G Q YP G P P Q P
Sbjct: 313 GGYSGGFPGQAPGGFPGAPPPLPGQQAAAPPQFGAPQPGYP--GQQPGYPPQPGQQPM-- 368
Query: 648 PGYPQQAGQAV--PNYP-QPG----GQQA-PSYGQVA-PTAG--YGQYTNTQQAYPEQ 694
PGYP Q GQ + P YP QPG GQ P + Q P AG Y Q ++ P+Q
Sbjct: 369 PGYPPQPGQQLGGPGYPPQPGAGFPGQPGRPGFNQPPMPGAGNMYQQAPQARRLDPDQ 426
Score = 112 (44.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 58/203 (28%), Positives = 69/203 (33%)
Query: 597 QSQVPSAQSYG-PNVPHQQ----QYPYATSGPTQQTYPS-YG---SAPA----PDSYNQP 643
Q +P+A S P +P Q Q P++ PT Q PS YG S P P P
Sbjct: 195 QPPIPAAGSTSQPPLPGQPPLPGQPPFSGQIPTSQPAPSPYGVPSSRPGQPQLPPGATPP 254
Query: 644 PASAPGYPQQAGQAVPNYPQPG-GQQAPSYGQVAPTAGYGQYTNTQQAYPEQP-----AT 697
+ PG P Q Q +P QPG QQ P + P G +Q P QP A
Sbjct: 255 TYTQPGLPPQQQQGIPPLQQPGIPQQQPGFPPQQP----GLPPLSQPGLPPQPGAPYGAP 310
Query: 698 SNAGY--GYQGTQDXXXXXXXXXXXXXXXTGQP--GYAQPA--ATQPSYDQSASQST--A 749
GY G+ G P G QP QP Y Q
Sbjct: 311 QQGGYSGGFPGQAPGGFPGAPPPLPGQQAAAPPQFGAPQPGYPGQQPGYPPQPGQQPMPG 370
Query: 750 YGVAQGTAAAGYGKTVSPQPGYP 772
Y G G G P G+P
Sbjct: 371 YPPQPGQQLGGPGYPPQPGAGFP 393
Score = 106 (42.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 55/194 (28%), Positives = 65/194 (33%)
Query: 597 QSQVPSAQSYGPNVPHQQQYPYATSG--PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQA 654
Q + SA G +PH AT G P Q P+ GS P QPP PG P +
Sbjct: 167 QMSLNSATLAG--LPHMPPPKAATPGAAPGQPPIPAAGSTSQPPLPGQPPL--PGQPPFS 222
Query: 655 GQAVPNYPQPGGQQAPSY--GQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXX 712
GQ + P P PS GQ G T TQ P Q G
Sbjct: 223 GQIPTSQPAPSPYGVPSSRPGQPQLPPGATPPTYTQPGLPPQQQQGIPPLQQPGIPQQQP 282
Query: 713 XXXXXXXXXXXXTGQPGYAQPAAT-QPSYDQSASQSTAY-GVAQGTAAAGYGKTVSPQPG 770
G P +QP QP A Q Y G G A G+ P PG
Sbjct: 283 GFPPQQ------PGLPPLSQPGLPPQPGAPYGAPQQGGYSGGFPGQAPGGFPGAPPPLPG 336
Query: 771 YPQYDSTQMYAAPR 784
Q + + AP+
Sbjct: 337 Q-QAAAPPQFGAPQ 349
Score = 78 (32.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 28/96 (29%), Positives = 38/96 (39%)
Query: 359 AQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTG-----PPQWGPRGSHPSQPM--AYDY 411
A + L + P +++ G NQ + G PP+ G+ P QP A
Sbjct: 144 AGSYVNGALPPSSTPQSVASGINQMSLNSATLAGLPHMPPPKAATPGAAPGQPPIPAAGS 203
Query: 412 PQRGPYPSQNPHYPHLPY-GNYPPQQMAPRSNYGGP 446
+ P P Q P P+ G P Q AP S YG P
Sbjct: 204 TSQPPLPGQPPLPGQPPFSGQIPTSQPAP-SPYGVP 238
Score = 71 (30.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/59 (32%), Positives = 23/59 (38%)
Query: 393 PPQWGPRGSH-PSQPM-AYDYPQRGPYPSQNPHYPHL--PYGNYPPQQMAPRSNYGGPP 447
P +GP + QP P G +P Q P P PPQQ + YG PP
Sbjct: 3 PNMYGPPPTQFQQQPQFGAPPPNSGGWPPQQQQLPQQQPPQQQLPPQQQQQQPQYGAPP 61
Score = 69 (29.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 24/69 (34%), Positives = 29/69 (42%)
Query: 386 RPRVPTGPPQWGPRGSHP-SQPMAYDYPQRGPY--PSQNPHYPHLPYGNYPPQQ----MA 438
+P +P PP P G P S + P PY PS P P LP G PP +
Sbjct: 206 QPPLPGQPPL--P-GQPPFSGQIPTSQPAPSPYGVPSSRPGQPQLPPGATPPTYTQPGLP 262
Query: 439 PRSNYGGPP 447
P+ G PP
Sbjct: 263 PQQQQGIPP 271
Score = 56 (24.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/66 (33%), Positives = 30/66 (45%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG-PYPSQNPHYPHLPYGNYPPQQMAP 439
N + P+ P Q P+ P Q PQ G P P+ P+L GNY QQ+A
Sbjct: 25 NSGGWPPQQQQLPQQQPPQQQLPPQQQQQQ-PQYGAPPPTSAASQPYLN-GNYQ-QQLA- 80
Query: 440 RSNYGG 445
++ GG
Sbjct: 81 -TSMGG 85
>UNIPROTKB|C9JZY3 [details] [associations]
symbol:PCBP4 "Poly(rC)-binding protein 4" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 EMBL:AC115284 HOGENOM:HOG000182823
HGNC:HGNC:8652 IPI:IPI00984041 ProteinModelPortal:C9JZY3 SMR:C9JZY3
STRING:C9JZY3 Ensembl:ENST00000468324 ArrayExpress:C9JZY3
Bgee:C9JZY3 Uniprot:C9JZY3
Length = 168
Score = 122 (48.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G+T++ ++ S A+I I+ + + R I G+ +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE-----RITTITGSTAA 71
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ A +I A + D +P A G S + + +P + G +IG+ G I
Sbjct: 72 VFHAVSMI-AFKLDEDLCAAP---ANG---GNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
K ++ +GA++Q+ LP S ER V V+G
Sbjct: 125 KEIRETTGAQVQVAGDLLPN---STERAVTVSG 154
>MGI|MGI:3647826 [details] [associations]
symbol:Gm4736 "predicted gene 4736" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:3647826 GeneTree:ENSGT00540000070914
InterPro:IPR026086 PANTHER:PTHR23203 EMBL:AC132581 IPI:IPI00762068
Ensembl:ENSMUST00000100870 OMA:KPHHRPP Bgee:D3YX21 Uniprot:D3YX21
Length = 301
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 50/144 (34%), Positives = 56/144 (38%)
Query: 536 PVQHP-YGGHSNSQPVYSQGGLQSGYHQ-HQYGKPPYGMPAQGTQPQSYXXXXXXXXXXX 593
P QHP + GH + P QGG Q +Q G PP G P QG+ PQ
Sbjct: 82 PPQHPPHPGHHHGPP--QQGGPQGPPRPGNQQGPPPPGPPPQGS-PQQ-------RPPQP 131
Query: 594 XXYQSQVPSA-QSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQP-----PASA 647
Q P P P QQ P GP QQ P G+ P P P +
Sbjct: 132 GKQQGPPPQGGPQQRPPQPGNQQGPPPQGGP-QQRPPQPGNQQGPPPQGGPQGPPRPGNQ 190
Query: 648 PGYPQQAG-QAVPNYPQPGGQQAP 670
G P Q G Q P PQPG QQ P
Sbjct: 191 QGPPPQGGPQERP--PQPGNQQGP 212
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 50/144 (34%)
Query: 536 PVQHP-YGGHSNSQPVYSQGGLQSGYHQ-HQYGKPPYGMPAQ-----GTQPQSYXXXXXX 588
P Q P G+ P QGG Q +Q G PP G P + G Q +
Sbjct: 162 PQQRPPQPGNQQGPP--PQGGPQGPPRPGNQQGPPPQGGPQERPPQPGNQQGPHPQGGLQ 219
Query: 589 XXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAP 648
Q P GP +P QQ P GP Q P G+ P PP P
Sbjct: 220 GPPRPGNQQGPPPKGSPQGPPMPGNQQGPPPQEGP--QGPPRPGNQQGP-----PPQGGP 272
Query: 649 GYPQQAGQAVPNYPQPGGQQAPSY 672
P Q G PQ G + P+Y
Sbjct: 273 QRPSQPGNH-QGPPQHGNNEQPNY 295
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 53/176 (30%), Positives = 59/176 (33%)
Query: 535 APVQHP-YGGHSNSQPVYSQGGLQSGYHQ--HQYGKPPYGMPAQGT-QP--QSYXXXXXX 588
+P Q P G P QGG Q Q +Q G PP G P Q QP Q
Sbjct: 123 SPQQRPPQPGKQQGPP--PQGGPQQRPPQPGNQQGPPPQGGPQQRPPQPGNQQGPPPQGG 180
Query: 589 XXXXXXXYQSQVPSAQSYGPNV----PHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ-P 643
Q P Q GP P QQ P+ G P P P Q P
Sbjct: 181 PQGPPRPGNQQGPPPQG-GPQERPPQPGNQQGPHPQGGLQGPPRPGNQQGPPPKGSPQGP 239
Query: 644 P--ASAPGYPQQAGQAVPNYPQPGGQQAP--SYGQVAPTAGYGQYTNTQQAYPEQP 695
P + G P Q G P P+PG QQ P G P+ Q EQP
Sbjct: 240 PMPGNQQGPPPQEGPQGP--PRPGNQQGPPPQGGPQRPSQPGNHQGPPQHGNNEQP 293
Score = 82 (33.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/71 (38%), Positives = 29/71 (40%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYP---PQQM 437
NQQ P P PPQ P+ P QP P P Q P P G P PQQ
Sbjct: 109 NQQG--PPPPGPPPQGSPQ-QRPPQPGKQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQQR 165
Query: 438 APR-SNYGGPP 447
P+ N GPP
Sbjct: 166 PPQPGNQQGPP 176
Score = 76 (31.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/62 (38%), Positives = 26/62 (41%)
Query: 390 PTGPPQWGPRGSHPSQPMAYDYPQRGPYPS--QNPHYPHLP-YGNYPPQQMAPR-SNYGG 445
P GPPQ P H P PQ P P Q P P P G+ PQQ P+ G
Sbjct: 79 PEGPPQHPPHPGHHHGPPQQGGPQGPPRPGNQQGPPPPGPPPQGS--PQQRPPQPGKQQG 136
Query: 446 PP 447
PP
Sbjct: 137 PP 138
Score = 74 (31.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/113 (27%), Positives = 42/113 (37%)
Query: 346 IVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQ 405
+V +T + + AQ +E+ + L G Q Y P PP G PS
Sbjct: 3 VVLLTAALLVLSSAQRQDEEITYEDSNSQLLERGEKSQGYGHHFPK-PPPGGMPPRPPSS 61
Query: 406 PMAYDYPQRGPYPSQN----P--HYPHLPYGNYPPQQMAPRS-----NYGGPP 447
D + G N P H PH + + PPQQ P+ N GPP
Sbjct: 62 DENNDGDEDGSEEDVNRPEGPPQHPPHPGHHHGPPQQGGPQGPPRPGNQQGPP 114
>ZFIN|ZDB-GENE-040426-1923 [details] [associations]
symbol:hnrpkl "heterogeneous nuclear
ribonucleoprotein K, like" species:7955 "Danio rerio" [GO:0003723
"RNA binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-1923 GO:GO:0003723 GO:GO:0030529
HOVERGEN:HBG051916 InterPro:IPR012987 Pfam:PF08067 EMBL:BC096867
IPI:IPI00493887 UniGene:Dr.47275 ProteinModelPortal:Q4V9J6
SMR:Q4V9J6 STRING:Q4V9J6 InParanoid:Q4V9J6 NextBio:20817897
ArrayExpress:Q4V9J6 Uniprot:Q4V9J6
Length = 431
Score = 121 (47.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 29/86 (33%), Positives = 51/86 (59%)
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
RG + + G ++ +P + G IIG+GG+ IK ++ SGA I+ I + L +GS+
Sbjct: 345 RG-SYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIK-IDEPL---EGSE 399
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+RI+ +TG QI+ AQ +++ + Q
Sbjct: 400 DRIITITGTQDQIQNAQYLLQNSVKQ 425
Score = 65 (27.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ + + G +IG G I+ L+ N+ I++ ++ PH+ R V + G + +
Sbjct: 125 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC--PHSTDRVVLVGGKPERVVEC 182
Query: 263 EKLINAVIAEADAGG 277
K+I +IAEA G
Sbjct: 183 IKVILELIAEAPIKG 197
>RGD|708580 [details] [associations]
symbol:Igf2bp1 "insulin-like growth factor 2 mRNA binding protein
1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006403 "RNA localization" evidence=IMP] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0010610 "regulation
of mRNA stability involved in response to stress" evidence=ISS]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0045182
"translation regulator activity" evidence=IEA] [GO:0048027 "mRNA
5'-UTR binding" evidence=IEA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IEA] [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 Pfam:PF13014 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 RGD:708580
GO:GO:0005886 GO:GO:0005634 GO:GO:0017148 GO:GO:0000166
GO:GO:0030425 Gene3D:3.30.70.330 GO:GO:0043197 GO:GO:0045182
GO:GO:0030027 GO:GO:0048027 GO:GO:0003730 GO:GO:0010494
GO:GO:0070937 GO:GO:0070934 HSSP:Q9Y6M1 HOVERGEN:HBG052725
CTD:10642 eggNOG:NOG249985 GeneTree:ENSGT00530000063171
HOGENOM:HOG000000675 OMA:EQETVHV OrthoDB:EOG405S0T GO:GO:0010610
GO:GO:0006403 EMBL:AF541940 IPI:IPI00192556 RefSeq:NP_783184.1
UniGene:Rn.77572 ProteinModelPortal:Q8CGX0 SMR:Q8CGX0 STRING:Q8CGX0
PhosphoSite:Q8CGX0 Ensembl:ENSRNOT00000008139 GeneID:303477
KEGG:rno:303477 UCSC:RGD:708580 InParanoid:Q8CGX0 NextBio:651402
ArrayExpress:Q8CGX0 Genevestigator:Q8CGX0 Uniprot:Q8CGX0
Length = 577
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 54/185 (29%), Positives = 84/185 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P VG +IGK G I+ L + A I+I P + R V I G KA
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA--PPETPDSKVRMVVITGPPEAQFKA 466
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I + E + G V L T I+VP G +IG+GG+T+ LQ
Sbjct: 467 QGRIYGKLKEENFFGPKEEVK--LET----------HIRVPASAAGRVIGKGGKTVNELQ 514
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+ A + + P D + + IV++ G ++AQ I+++L+Q V+ G NQ
Sbjct: 515 NLTAAEVVVPRDQTP--DENDQVIVKIIGHFYASQMAQRKIRDILAQ-VKQQHQKGQSNQ 571
Query: 383 -QAYR 386
QA R
Sbjct: 572 AQARR 576
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V++ +P + VG IIG+ G+ IK L + A I++ P PE SK R+V +TG
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP---PETPDSKVRMVVITG 458
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G + N +A
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRA 339
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 340 EQEIMKKVREA 350
>UNIPROTKB|G4N9Q9 [details] [associations]
symbol:MGG_10692 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS50020 SMART:SM00456 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:CM001234 RefSeq:XP_003715885.1
ProteinModelPortal:G4N9Q9 EnsemblFungi:MGG_10692T0 GeneID:2682893
KEGG:mgr:MGG_10692 Uniprot:G4N9Q9
Length = 447
Score = 121 (47.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 49/148 (33%), Positives = 55/148 (37%)
Query: 568 PPYGMP-AQGTQPQS-YXXXXXXXXXXXXXYQSQVPSAQSYG---PNVPHQQQYPYATSG 622
PP G P A PQS Y P A Y P P+ QQ PY +
Sbjct: 133 PPPGYPGAPPPIPQSSYPGSPPAPGGDGTRSAGGPPGASPYASPPPGAPYGQQPPYGSPS 192
Query: 623 PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYG 682
P P G+A PP A Y A P Y P GQQ YGQ +P YG
Sbjct: 193 PYGAAPPQGGAAAGYFGGAPPPGGAAPYGSPPPGA-P-YGSPYGQQPSPYGQQSP---YG 247
Query: 683 QYTNT-QQAYPEQPATSNAGYGYQGTQD 709
Q QQ Y P T YG + T+D
Sbjct: 248 QQPPYGQQPYGGAPPTHP--YGQEATKD 273
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 64/233 (27%), Positives = 74/233 (31%)
Query: 561 HQHQ--YGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPY 618
HQ Q YG+ PY G PQ Y Y + P P P Q Q P
Sbjct: 44 HQQQPPYGQQPYQQQPYGQPPQQYGSPHPSG------YAATPPPPPQQQPTPPGQPQLPP 97
Query: 619 A-TS--GPTQQTYPSYGSAPAPDSYNQP-----PASAPGYPQQAGQAVPNYPQPGGQQAP 670
TS P+ Q Y +A + P P PGYP A +P PG AP
Sbjct: 98 GWTSHWDPSSQRYYYVEAATGKTQWEAPAAPPPPPPPPGYPG-APPPIPQSSYPGSPPAP 156
Query: 671 SYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGY 730
G +AG G + A P P A YG Q G G
Sbjct: 157 G-GDGTRSAG-GPPGASPYASPP-PG---APYGQQPPYGSPSPYGAAPPQGGAAAGYFGG 210
Query: 731 AQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAP 783
A P Y S YG G + YG+ SP P Y AP
Sbjct: 211 APPPGGAAPYG-SPPPGAPYGSPYGQQPSPYGQQ-SPYGQQPPYGQQPYGGAP 261
Score = 119 (46.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 51/198 (25%), Positives = 63/198 (31%)
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSY-GSAPAPDS---YNQPPASAPGYP 651
Y S P A YG P+ PY + P Y G AP P Y PP AP Y
Sbjct: 173 YASPPPGAP-YGQQPPYGSPSPYGAAPPQGGAAAGYFGGAPPPGGAAPYGSPPPGAP-YG 230
Query: 652 QQAGQAVPNYPQ--PGGQQAP----SYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQ 705
GQ Y Q P GQQ P YG PT YGQ ++ +S G
Sbjct: 231 SPYGQQPSPYGQQSPYGQQPPYGQQPYGGAPPTHPYGQEATKDPQTGKKAGSSGMLLGVA 290
Query: 706 GTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTV 765
G + AA + +A+ A A A A
Sbjct: 291 GGLAAGAVGGALLNHALSGDDSDDEKEKAAAAAAAAPAAAAPAAAAAAAPAAVAAPVAAE 350
Query: 766 SPQPGYPQYDSTQMYAAP 783
+ +P P + Y P
Sbjct: 351 AAEPPPPTIINNYYYDTP 368
Score = 67 (28.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/68 (30%), Positives = 26/68 (38%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPR 440
+Q+ Y TG QW + P P P G YP P P Y PP
Sbjct: 107 SQRYYYVEAATGKTQWEAPAAPPPPP-----PPPG-YPGAPPPIPQSSYPGSPPAPGGDG 160
Query: 441 S-NYGGPP 447
+ + GGPP
Sbjct: 161 TRSAGGPP 168
Score = 58 (25.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 24/72 (33%), Positives = 27/72 (37%)
Query: 382 QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPY----PSQNPHYPHLP-YGNYPPQQ 436
QQ P P PP W SQ Y G P+ P P P Y PP
Sbjct: 85 QQPTPPGQPQLPPGWTSHWDPSSQRYYYVEAATGKTQWEAPAAPPPPPPPPGYPGAPPP- 143
Query: 437 MAPRSNY-GGPP 447
P+S+Y G PP
Sbjct: 144 -IPQSSYPGSPP 154
Score = 55 (24.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 416 PYPSQNPHYPHLPYGNYPPQQMA---PRSNYGGP 446
P P Q H PYG P QQ P YG P
Sbjct: 38 PAPQQQ-HQQQPPYGQQPYQQQPYGQPPQQYGSP 70
>UNIPROTKB|J9NTN3 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:AAEX03001719
Ensembl:ENSCAFT00000044234 Uniprot:J9NTN3
Length = 1899
Score = 148 (57.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 71/241 (29%), Positives = 83/241 (34%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQ-HQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQS 598
PYGG + P Q G SG Q H Y PYG P + Y
Sbjct: 11 PYGG---TNPYSQQQGPSSGPQQGHGYPGQPYGSQTPQRYPMAMQGRAQSAMGGLS-YAQ 66
Query: 599 QVPSAQSYGPNVPHQQ-QYPYATS-GP-TQQTYPSYGSAP------APDSYNQPPASAPG 649
Q+P GP+ QQ Q PY P QQ P Y P A SY Q P S P
Sbjct: 67 QIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQNPHAQPSYQQQPQSQP- 125
Query: 650 YPQ-QAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQ 708
PQ QA Q P Y Q Q P + Q +PT Q TQQ QP Y Q
Sbjct: 126 -PQLQASQ--PPYSQQPSQ--PPHQQ-SPTPYPSQQPTTQQHPQSQPP-----YSQPQAQ 174
Query: 709 DXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQ 768
+ Q Y QP + Q Q+A + Q + +G S
Sbjct: 175 SPYQQQQPQQPASSTLSQQAAYPQPQSQQSQ--QTAYSQQRFPPPQELSQDSFGSQASSA 232
Query: 769 P 769
P
Sbjct: 233 P 233
Score = 145 (56.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 58/185 (31%), Positives = 74/185 (40%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQ-PVYSQGGLQSGYHQHQYGK--PPYGM--PA-QGTQPQ 580
GHGY P Q PYG + + P+ QG QS Y + PPYG P+ G Q Q
Sbjct: 31 GHGY-----PGQ-PYGSQTPQRYPMAMQGRAQSAMGGLSYAQQIPPYGQQGPSGYGQQGQ 84
Query: 581 S--YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD 638
+ Y Y Q PS + P QQ P + Q + P Y P+
Sbjct: 85 TPYYNQQSPHPQQQQPPYSQQPPSQNPHAQ--PSYQQQPQSQPPQLQASQPPYSQQPSQP 142
Query: 639 SYNQPPASAPGY-P--QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
+ Q P P P QQ Q+ P Y QP Q +P Y Q P + Q AYP QP
Sbjct: 143 PHQQSPTPYPSQQPTTQQHPQSQPPYSQPQAQ-SP-YQQQQPQQPASSTLSQQAAYP-QP 199
Query: 696 ATSNA 700
+ +
Sbjct: 200 QSQQS 204
Score = 132 (51.5 bits), Expect = 0.00017, P = 0.00017
Identities = 73/236 (30%), Positives = 82/236 (34%)
Query: 564 QYGK--P-PYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYAT 620
Q GK P PYG GT P S Y Q P YG P Q+YP A
Sbjct: 3 QMGKMRPQPYG----GTNPYSQQQGPSSGPQQGHGYPGQ-P----YGSQTP--QRYPMAM 51
Query: 621 SGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNY----PQPGGQQAPSYGQVA 676
G Q A Y Q S GY QQ GQ P Y P P QQ P Y Q
Sbjct: 52 QGRAQSAMGGLSYAQQIPPYGQQGPS--GYGQQ-GQT-PYYNQQSPHPQ-QQQPPYSQQP 106
Query: 677 PTAG-YGQ--YTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXT-----GQP 728
P+ + Q Y Q+ P Q S Y Q +Q T QP
Sbjct: 107 PSQNPHAQPSYQQQPQSQPPQLQASQPPYSQQPSQPPHQQSPTPYPSQQPTTQQHPQSQP 166
Query: 729 GYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
Y+QP A P Y Q Q A AA Y + S Q Y S Q + P+
Sbjct: 167 PYSQPQAQSP-YQQQQPQQPASSTLSQQAA--YPQPQSQQSQQTAY-SQQRFPPPQ 218
Score = 98 (39.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 52/177 (29%), Positives = 64/177 (36%)
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQP 664
S G P QQQ P A P Q + S P D YNQ YP A A P
Sbjct: 1009 STGQGQPQQQQLPPAQPQPASQQQAAQPS-PQQDVYNQ---YGNAYPATAAAATERRPAG 1064
Query: 665 GGQ-QAP-SYGQVAPTAGYGQYTNTQQAYPEQ----PATSNAGYGYQGTQDXXXXXXXXX 718
G Q Q P +G+ +A G +N QQ P Q P ++A QGT
Sbjct: 1065 GPQNQFPFQFGRDRVSAPPG--SNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYN 1122
Query: 719 XXXXXXTGQ----PGYAQPAATQPSY--DQSASQSTAYGVAQGTAAAGYGKTVSPQP 769
TG P Y T DQ A+ + + GT YG + +P P
Sbjct: 1123 YTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWP-SHGTRQPPYGPS-APLP 1177
Score = 84 (34.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 30/88 (34%), Positives = 39/88 (44%)
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAY-----DYPQRGPYPSQNP-------H-Y 424
G + Q + P G Q+GP+G +P QP +YP G S NP H
Sbjct: 403 GSYQQNSMGSYGPQGS-QYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQ 461
Query: 425 PHLP-YGNYPPQQMAPRSNYGGP--PNM 449
P +P YG PP +M+ S P PNM
Sbjct: 462 PGIPPYGTLPPGRMSHASMGNRPYGPNM 489
Score = 82 (33.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 37/129 (28%), Positives = 52/129 (40%)
Query: 322 QTRSGARIQL-IP-QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
Q+RSG +P +P S + + M Q IAQ+ + + + + S
Sbjct: 325 QSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQD--RGYMQRNPQMPQYSSP 382
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPM-AY-----DYPQRGPYPSQNPHYPHLPYGNYP 433
A PR P+G GS+ M +Y Y +G YP Q P+Y LP NYP
Sbjct: 383 QPGSALSPRQPSGGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQ-PNYNALPNANYP 441
Query: 434 PQQMAPRSN 442
MA N
Sbjct: 442 SAGMAGSMN 450
>UNIPROTKB|F1NWN2 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GeneTree:ENSGT00530000063171 EMBL:AADN02024285
EMBL:AADN02024286 IPI:IPI00599184 Ensembl:ENSGALT00000010541
Uniprot:F1NWN2
Length = 551
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 49/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P A R V I G KA+
Sbjct: 385 IPTQAVGAIIGKKGQHIKQLARFAGASIKIA-PAEG-PDATERMVIITGPPEAQFKAQGR 442
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + IKVP+ G +IG+GG+T+ LQ +
Sbjct: 443 IFGKLKEENFFNPKEEVKL------------EAHIKVPSFAAGRVIGKGGKTVNELQNLT 490
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IV++ G + AQ I+E++ Q
Sbjct: 491 SAEV-IVPRDQTP-DENEEVIVKIIGHFFASQTAQRKIREIVQQ 532
Score = 96 (38.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V + +P + VG IIG+ G+ IK L +GA I++ P EG + ER+V +TG
Sbjct: 379 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPA---EGPDATERMVIITG 431
Score = 78 (32.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI N+ VG LIGK G ++ ++ ++G KI I+ D + R + + G+ A
Sbjct: 251 KILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSTEACSNA 310
Query: 263 EKLINAVIAEA 273
E I + EA
Sbjct: 311 EVEIMKKLREA 321
>UNIPROTKB|F1NVW3 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0044430 "cytoskeletal part" evidence=IEA] [GO:0048027 "mRNA
5'-UTR binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 GeneTree:ENSGT00530000063171
GO:GO:0044430 OMA:KQQEQKH EMBL:AADN02024285 EMBL:AADN02024286
IPI:IPI00581668 Ensembl:ENSGALT00000022629 Uniprot:F1NVW3
Length = 573
Score = 141 (54.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 49/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P A R V I G KA+
Sbjct: 407 IPTQAVGAIIGKKGQHIKQLARFAGASIKIA-PAEG-PDATERMVIITGPPEAQFKAQGR 464
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + IKVP+ G +IG+GG+T+ LQ +
Sbjct: 465 IFGKLKEENFFNPKEEVKL------------EAHIKVPSFAAGRVIGKGGKTVNELQNLT 512
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IV++ G + AQ I+E++ Q
Sbjct: 513 SAEV-IVPRDQTP-DENEEVIVKIIGHFFASQTAQRKIREIVQQ 554
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 64/248 (25%), Positives = 106/248 (42%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP VG +IGK G TI+ L + +K+ I R +A AA +P+ I T +A ++
Sbjct: 173 VPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAG--AAEKPITIHATPEGCSEACRM 230
Query: 266 INAVIA-EADAGGSPSLVARGLATAQASGAAE-QVEIKVPNEKVGLIIGRGGETIKGLQT 323
I ++ EAD + A E ++I N VG +IG+ G +K ++
Sbjct: 231 ILDIMQKEAD---------------ETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQ 275
Query: 324 RSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV---RPS 374
+G +I + P Q L + ER + V G ++EI +++ + + V + +
Sbjct: 276 DTGTKITISPLQDLTIYN--PERTITVKGSTEACSNAEVEIMKKLREAYENDIVAVNQQA 333
Query: 375 TLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGN 431
L G N A + + P G RG+ + P + + Y S Y P G
Sbjct: 334 NLIPGLNLSALGIFSTGLSMLPSSAGARGAAAAAPY-HPFASSSAYLSGL--YGASPVGA 390
Query: 432 YPPQQMAP 439
+P Q P
Sbjct: 391 FPHQHPLP 398
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V + +P + VG IIG+ G+ IK L +GA I++ P EG + ER+V +TG
Sbjct: 401 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPA---EGPDATERMVIITG 453
Score = 78 (32.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI N+ VG LIGK G ++ ++ ++G KI I+ D + R + + G+ A
Sbjct: 251 KILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGSTEACSNA 310
Query: 263 EKLINAVIAEA 273
E I + EA
Sbjct: 311 EVEIMKKLREA 321
>UNIPROTKB|Q9NZI8 [details] [associations]
symbol:IGF2BP1 "Insulin-like growth factor 2 mRNA-binding
protein 1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006403 "RNA localization" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0043197 "dendritic
spine" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0010610 "regulation
of mRNA stability involved in response to stress" evidence=IMP]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0045182 "translation
regulator activity" evidence=IDA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IDA] [GO:0042035 "regulation of cytokine biosynthetic
process" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0043197 GO:GO:0045182 GO:GO:0030027
GO:GO:0003723 GO:GO:0048027 GO:GO:0003730 GO:GO:0042035
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 HOVERGEN:HBG052725
CTD:10642 eggNOG:NOG249985 HOGENOM:HOG000000675 OMA:EQETVHV
OrthoDB:EOG405S0T GO:GO:0010610 EMBL:AF198254 EMBL:DQ227344
EMBL:AC091133 EMBL:AC105030 IPI:IPI00008557 IPI:IPI00930694
RefSeq:NP_001153895.1 RefSeq:NP_006537.3 UniGene:Hs.144936 PDB:3KRM
PDBsum:3KRM ProteinModelPortal:Q9NZI8 SMR:Q9NZI8 DIP:DIP-38139N
IntAct:Q9NZI8 STRING:Q9NZI8 PhosphoSite:Q9NZI8 DMDM:296434536
PaxDb:Q9NZI8 PeptideAtlas:Q9NZI8 PRIDE:Q9NZI8 DNASU:10642
Ensembl:ENST00000290341 Ensembl:ENST00000431824 GeneID:10642
KEGG:hsa:10642 UCSC:uc002iom.3 GeneCards:GC17P047074
H-InvDB:HIX0013955 HGNC:HGNC:28866 HPA:HPA021367 MIM:608288
neXtProt:NX_Q9NZI8 PharmGKB:PA143485501 InParanoid:Q9NZI8
PhylomeDB:Q9NZI8 EvolutionaryTrace:Q9NZI8 GenomeRNAi:10642
NextBio:40447 ArrayExpress:Q9NZI8 Bgee:Q9NZI8 CleanEx:HS_IGF2BP1
CleanEx:HS_ZBP1 Genevestigator:Q9NZI8 GO:GO:0006403 Uniprot:Q9NZI8
Length = 577
Score = 141 (54.7 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 54/185 (29%), Positives = 84/185 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P VG +IGK G I+ L + A I+I P + R V I G KA
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA--PPETPDSKVRMVIITGPPEAQFKA 466
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I + E + G V L T I+VP G +IG+GG+T+ LQ
Sbjct: 467 QGRIYGKLKEENFFGPKEEVK--LET----------HIRVPASAAGRVIGKGGKTVNELQ 514
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+ A + + P D + + IV++ G ++AQ I+++L+Q V+ G NQ
Sbjct: 515 NLTAAEVVVPRDQTP--DENDQVIVKIIGHFYASQMAQRKIRDILAQ-VKQQHQKGQSNQ 571
Query: 383 -QAYR 386
QA R
Sbjct: 572 AQARR 576
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V++ +P + VG IIG+ G+ IK L + A I++ P PE SK R+V +TG
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP---PETPDSKVRMVIITG 458
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G + N +A
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRA 339
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 340 EQEIMKKVREA 350
>TAIR|locus:2057140 [details] [associations]
symbol:AT2G38410 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005795 "Golgi stack" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA;ISS] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS] [GO:0008565
"protein transporter activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR002014 InterPro:IPR004152
Pfam:PF00790 Pfam:PF03127 PROSITE:PS50179 PROSITE:PS50909
GO:GO:0005886 GO:GO:0006886 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005622 Gene3D:1.25.40.90 InterPro:IPR008942 SUPFAM:SSF48464
EMBL:AC004683 InterPro:IPR018205 SMART:SM00288 HSSP:O60784
eggNOG:NOG118960 EMBL:BT046195 IPI:IPI00547738 PIR:T02504
RefSeq:NP_181375.1 UniGene:At.12782 ProteinModelPortal:O80910
SMR:O80910 PaxDb:O80910 PRIDE:O80910 EnsemblPlants:AT2G38410.1
GeneID:818422 KEGG:ath:AT2G38410 TAIR:At2g38410
HOGENOM:HOG000241362 InParanoid:O80910 OMA:QAGYGVP PhylomeDB:O80910
ProtClustDB:CLSN2912925 ArrayExpress:O80910 Genevestigator:O80910
Uniprot:O80910
Length = 671
Score = 102 (41.0 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 51/183 (27%), Positives = 64/183 (34%)
Query: 608 PNVPHQQQYPYATSGPTQQTY------PSYGSAPAP-DSYNQP--PASAPGYPQ-QAGQA 657
P P Q P +G Q T+ P + S AP QP P + GY Q Q Q
Sbjct: 446 PPAPSSQPSPPPPAGSDQNTHIYPQPQPRFDSYVAPWAQQQQPQQPQAQQGYSQHQQHQQ 505
Query: 658 VPNYPQPG-GQQAPSYGQVA---PTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXX 713
Y QP QQ Y Q+ P GY Q + Q QP+T Y+
Sbjct: 506 QQGYSQPQHSQQQQGYSQLQQPQPQQGYSQ-SQPQAQVQMQPSTRPQN-PYEYPPPPWAS 563
Query: 714 XXXXXXXXXXXTGQPGYAQPAATQP-SYDQSASQSTAYGVAQGTA-AAGYGKTVSPQPGY 771
Y +A S QS S T G Q T+ A+ G +V +P
Sbjct: 564 TSANAYYTPRANASASYTDTSALAGRSLQQSNSFPTRAGDPQATSTASNSGVSVGQKPFV 623
Query: 772 PQY 774
P Y
Sbjct: 624 PSY 626
Score = 82 (33.9 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 37/138 (26%), Positives = 63/138 (45%)
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K LQ +S +R+QL+ L E +V+ GD ++A+ K +L + V+ +
Sbjct: 51 KRLQHKS-SRVQLLALTL------LETLVKNCGDYLHHQVAE---KNILGEMVK--IVKK 98
Query: 379 GFNQQAYRPRVPTGPPQW-----GPRGSHPSQPMAYDYPQRG--PYPSQNPHYPHL--PY 429
+ Q R ++ W GP G +P AYD +R +P ++P + P
Sbjct: 99 KADMQV-RDKILVMVDSWQQAFGGPEGKYPQYYWAYDELRRSGVEFPRRSPDASPIITPP 157
Query: 430 GNYPPQQMAPRSNYGGPP 447
++PP + P+ YG PP
Sbjct: 158 VSHPPLRQ-PQGGYGVPP 174
Score = 81 (33.6 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 37/128 (28%), Positives = 43/128 (33%)
Query: 568 PPYGMPAQGTQ--PQSYXXXXXXXXXXXXXYQSQVPSAQS-YGPNVPHQQQYPYATSGPT 624
PP G Q T PQ Q Q P AQ Y + HQQQ Y+ +
Sbjct: 457 PPAGSD-QNTHIYPQPQPRFDSYVAPWAQQQQPQQPQAQQGYSQHQQHQQQQGYSQPQHS 515
Query: 625 QQTYP-SYGSAPAPD---SYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAG 680
QQ S P P S +QP A P Q YP P + P A
Sbjct: 516 QQQQGYSQLQQPQPQQGYSQSQPQAQVQMQPSTRPQNPYEYPPPPWASTSANAYYTPRAN 575
Query: 681 YG-QYTNT 687
YT+T
Sbjct: 576 ASASYTDT 583
Score = 48 (22.0 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 529 GYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPA 574
GY + A P G+ Q Y G Q+GY Q G YGMP+
Sbjct: 176 GYGVHQAGYGVPQAGYGIPQAGY--GVPQAGYGIPQVG---YGMPS 216
>UNIPROTKB|K7GQW0 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 Gene3D:3.30.70.330
GeneTree:ENSGT00530000063171 EMBL:CU582974
Ensembl:ENSSSCT00000035698 Uniprot:K7GQW0
Length = 477
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 312 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 369
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 370 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 417
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 418 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 459
Score = 129 (50.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 52/163 (31%), Positives = 74/163 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI N VG LIGK G ++ +++ +G KI I+ D + R + + GT+ A
Sbjct: 199 KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACANA 258
Query: 263 EKLINAVIAEA---D--AGGSPSLVARGLATAQASGA-------AEQ--VEIKVPNEKVG 308
E I + EA D A + S L G EQ V + +P + VG
Sbjct: 259 EIEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVG 318
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
IIG+ G IK L +GA I++ P EG ER+V +TG
Sbjct: 319 AIIGKKGAHIKQLARFAGASIKIAPA---EGPDVSERMVIITG 358
>UNIPROTKB|E1B925 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042921
"glucocorticoid receptor signaling pathway" evidence=IEA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IEA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006337
"nucleosome disassembly" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 GO:GO:0045893 GO:GO:0030521 GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0016514 OMA:GSQYGPQ GO:GO:0030520
GO:GO:0006337 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:DAAA02006369
EMBL:DAAA02006370 EMBL:DAAA02006371 IPI:IPI01000128
Ensembl:ENSBTAT00000001360 Uniprot:E1B925
Length = 2112
Score = 143 (55.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 78/265 (29%), Positives = 92/265 (34%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKP-PYGMPAQGTQPQSYXXXXXXXXX 591
+HAP+ P QP+ S Q +P PYG GT P S
Sbjct: 186 HHAPMS-PGSSGGGGQPLVRTPQPSSPMDQMGKMRPQPYG----GTNPYSQQQGPPSGPQ 240
Query: 592 XXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
Y Q P YG P Q+YP G Q T A Y Q S GY
Sbjct: 241 QGHGYPGQ-P----YGSQTP--QRYPMTMQGRAQSTMGGLSYAQQIPPYGQQGPS--GYG 291
Query: 652 QQAGQAVPNY----PQPGGQQAPSYGQVAPT-AGYGQ--YTNTQQAYPEQPATSNAGYGY 704
QQ GQ P Y P P QQ P Y Q P+ + Q Y Q+ P Q +S Y
Sbjct: 292 QQ-GQT-PYYNQQSPHPQ-QQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQ 348
Query: 705 QGTQDXXXXXXXXXXXXXXXT-----GQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA 759
Q +Q T QP Y+QP A P Y Q Q A AA
Sbjct: 349 QPSQPPHQPSPTPYPSQQSSTQQHPQSQPPYSQPQAQSP-YQQQQPQQPASSTLSQQAA- 406
Query: 760 GYGKTVSPQPGYPQYDSTQMYAAPR 784
Y + S Q Y S Q + P+
Sbjct: 407 -YPQPQSQQSQQTAY-SQQRFPPPQ 429
Score = 136 (52.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 56/185 (30%), Positives = 72/185 (38%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQ-PVYSQGGLQSGYHQHQYGK--PPYGM--PA-QGTQPQ 580
GHGY P Q PYG + + P+ QG QS Y + PPYG P+ G Q Q
Sbjct: 242 GHGY-----PGQ-PYGSQTPQRYPMTMQGRAQSTMGGLSYAQQIPPYGQQGPSGYGQQGQ 295
Query: 581 S--YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPD 638
+ Y Y Q PS + P QQ P + Q + P Y P+
Sbjct: 296 TPYYNQQSPHPQQQQPPYSQQPPSQTPHAQ--PSYQQQPQSQPPQLQSSQPPYSQQPSQP 353
Query: 639 SYNQPPASAPGYP---QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
+ P P QQ Q+ P Y QP Q +P Y Q P + Q AYP QP
Sbjct: 354 PHQPSPTPYPSQQSSTQQHPQSQPPYSQPQAQ-SP-YQQQQPQQPASSTLSQQAAYP-QP 410
Query: 696 ATSNA 700
+ +
Sbjct: 411 QSQQS 415
Score = 95 (38.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 49/176 (27%), Positives = 65/176 (36%)
Query: 536 PVQH-PYGG---HSNSQP-VYSQGGLQSGYHQHQY--GKPPYGMPAQGTQP-QSYXXXXX 587
P QH PYGG ++P + +G + +G Q P GM + P Q
Sbjct: 1103 PRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQR 1162
Query: 588 XXXXXXXXYQSQ-VPSAQ---SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQP 643
+ +Q PS S + QQQ Y P TY + Y+ P
Sbjct: 1163 RHDSYGNQFSAQGTPSGSPFPSQQTTMYQQQQQNYKR--PMDGTYGPPAKRHEGEMYSVP 1220
Query: 644 PASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAG-YGQYTNTQQAYPEQPATS 698
++ G PQQ Q P P P QQ + Q P Y QY N AYP A +
Sbjct: 1221 YSAGQGQPQQQ-QLPPAQPPPANQQQAA--QPPPQQDVYNQYGN---AYPATAAAA 1270
Score = 84 (34.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 30/88 (34%), Positives = 39/88 (44%)
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAY-----DYPQRGPYPSQNP-------H-Y 424
G + Q + P G Q+GP+G +P QP +YP G S NP H
Sbjct: 614 GSYQQNSMGSYGPQGS-QYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQ 672
Query: 425 PHLP-YGNYPPQQMAPRSNYGGP--PNM 449
P +P YG PP +M+ S P PNM
Sbjct: 673 PGIPPYGTLPPGRMSHASMGNRPYGPNM 700
Score = 56 (24.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 18/61 (29%), Positives = 24/61 (39%)
Query: 388 RVPTGPPQWGPRGSHP-SQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGP 446
R + P + G G P + P + P N +YP+ PPQ A S GG
Sbjct: 5 RGDSAPGRGGVGGGXPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGT 64
Query: 447 P 447
P
Sbjct: 65 P 65
>UNIPROTKB|K7GQ87 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GeneTree:ENSGT00530000063171 EMBL:CU582974
Ensembl:ENSSSCT00000035397 Uniprot:K7GQ87
Length = 498
Score = 139 (54.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 333 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 390
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 391 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 438
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 439 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 480
Score = 133 (51.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 66/254 (25%), Positives = 116/254 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 96 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 153
Query: 263 EKLINAVIA-EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
++I ++ EAD + +A + ++I N VG +IG+ G +K +
Sbjct: 154 CRMILEIMQKEADE----TKLAEEIP----------LKILAHNGLVGRLIGKEGRNLKKI 199
Query: 322 QTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV---- 371
+ +G +I + Q L + ER + V G + +IEI +++ +E +
Sbjct: 200 EHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKL-REAFENDMLAVN 256
Query: 372 RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPS-QNPH---- 423
+ + L G N A + + PP GPRG+ P+ P G + S PH
Sbjct: 257 QQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGP 316
Query: 424 YPHLPYGNYPPQQM 437
+PH + +YP Q++
Sbjct: 317 FPH--HHSYPEQEI 328
>UNIPROTKB|K7GKD3 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 Gene3D:3.30.70.330
GeneTree:ENSGT00530000063171 EMBL:CU582974
Ensembl:ENSSSCT00000033522 Uniprot:K7GKD3
Length = 520
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 355 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 412
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 413 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 460
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 461 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 502
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 66/254 (25%), Positives = 116/254 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 118 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 175
Query: 263 EKLINAVIA-EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
++I ++ EAD + +A + ++I N VG +IG+ G +K +
Sbjct: 176 CRMILEIMQKEADE----TKLAEEIP----------LKILAHNGLVGRLIGKEGRNLKKI 221
Query: 322 QTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV---- 371
+ +G +I + Q L + ER + V G + +IEI +++ +E +
Sbjct: 222 EHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKL-REAFENDMLAVN 278
Query: 372 RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPS-QNPH---- 423
+ + L G N A + + PP GPRG+ P+ P G + S PH
Sbjct: 279 QQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGP 338
Query: 424 YPHLPYGNYPPQQM 437
+PH + +YP Q++
Sbjct: 339 FPH--HHSYPEQEI 350
>UNIPROTKB|F1SFK0 [details] [associations]
symbol:RFC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0044430
"cytoskeletal part" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 GeneTree:ENSGT00530000063171
GO:GO:0044430 OMA:KQQEQKH EMBL:CU582974 Ensembl:ENSSSCT00000012907
Uniprot:F1SFK0
Length = 524
Score = 139 (54.0 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 359 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 416
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 417 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 464
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 465 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 506
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 66/254 (25%), Positives = 116/254 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 122 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 179
Query: 263 EKLINAVIA-EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
++I ++ EAD + +A + ++I N VG +IG+ G +K +
Sbjct: 180 CRMILEIMQKEADE----TKLAEEIP----------LKILAHNGLVGRLIGKEGRNLKKI 225
Query: 322 QTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV---- 371
+ +G +I + Q L + ER + V G + +IEI +++ +E +
Sbjct: 226 EHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKL-REAFENDMLAVN 282
Query: 372 RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPS-QNPH---- 423
+ + L G N A + + PP GPRG+ P+ P G + S PH
Sbjct: 283 QQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGP 342
Query: 424 YPHLPYGNYPPQQM 437
+PH + +YP Q++
Sbjct: 343 FPH--HHSYPEQEI 354
>UNIPROTKB|F1PDI8 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GeneTree:ENSGT00530000063171 CTD:10644 OMA:KQQEQKH
EMBL:AAEX03017290 EMBL:AAEX03017291 EMBL:AAEX03017292
RefSeq:XP_535832.3 Ensembl:ENSCAFT00000021148 GeneID:478662
KEGG:cfa:478662 Uniprot:F1PDI8
Length = 531
Score = 139 (54.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 366 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 423
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 424 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 471
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 472 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 513
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 65/254 (25%), Positives = 116/254 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 129 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 186
Query: 263 EKLINAVIA-EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
++I ++ EAD + +A + ++I N VG +IG+ G +K +
Sbjct: 187 CRMILEIMQKEADE----TKLAEEIP----------LKILAHNGLVGRLIGKEGRNLKKI 232
Query: 322 QTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV---- 371
+ +G +I + Q L + ER + V G + ++EI +++ +E +
Sbjct: 233 EHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKL-REAFENDMLAVN 289
Query: 372 RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPS-QNPH---- 423
+ + L G N A + + PP GPRG+ P+ P G + S PH
Sbjct: 290 QQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGP 349
Query: 424 YPHLPYGNYPPQQM 437
+PH + +YP Q++
Sbjct: 350 FPH--HHSYPEQEI 361
>FB|FBgn0261885 [details] [associations]
symbol:osa "osa" species:7227 "Drosophila melanogaster"
[GO:0046530 "photoreceptor cell differentiation" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IMP] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0007379 "segment
specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=ISS;IDA;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=IC] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] [GO:0042058 "regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
EMBL:AE014297 GO:GO:0048190 GO:GO:0045893 GO:GO:0016055
GO:GO:0003677 GO:GO:0008586 GO:GO:0006351 GO:GO:0016568
eggNOG:NOG12793 GO:GO:0007379 GO:GO:0007480 KO:K11653
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 GO:GO:0046530 GO:GO:0008587
GO:GO:0035060 GO:GO:0042058 EMBL:AF053091 PIR:T13049
RefSeq:NP_001163639.1 RefSeq:NP_524392.2 RefSeq:NP_732263.1
UniGene:Dm.2989 ProteinModelPortal:Q8IN94 SMR:Q8IN94 DIP:DIP-20699N
IntAct:Q8IN94 MINT:MINT-297379 STRING:Q8IN94 PaxDb:Q8IN94
PRIDE:Q8IN94 EnsemblMetazoa:FBtr0089581 EnsemblMetazoa:FBtr0301487
GeneID:42130 KEGG:dme:Dmel_CG7467 CTD:42130 FlyBase:FBgn0261885
InParanoid:Q8IN94 OMA:SQMGQGP OrthoDB:EOG4MCVF9 PhylomeDB:Q8IN94
ChiTaRS:osa GenomeRNAi:42130 NextBio:827314 Bgee:Q8IN94
GermOnline:CG7467 Uniprot:Q8IN94
Length = 2716
Score = 133 (51.9 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 46/174 (26%), Positives = 57/174 (32%)
Query: 536 PVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPP---YGMPAQGTQPQSYXXXXXXXXXX 592
P QH Y + Q + + Q Q G PP +G P QP Y
Sbjct: 227 PPQHRYANTYDPQQAAASAAAAAAAQQQQAGGPPPPGHGPPPPQHQPSPYGGQQGGWAPP 286
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQ-QTYPSYGSAPAPDSYNQPPASAPGYP 651
Y Q+ +Q Y P + P Q SY S+P Q
Sbjct: 287 PRPYSPQLGPSQQYRTPPPTNTSRGQSPYPPAHGQNSGSYPSSPQQQQQQQQQQQQQA-G 345
Query: 652 QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQ 705
QQ G VP P PG Q P PT+ Y Y Q YP P G ++
Sbjct: 346 QQPGGPVPGGPPPGTGQQPPQQNTPPTSQYSPYP---QRYPTPPGLPAGGSNHR 396
Score = 117 (46.2 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 73/270 (27%), Positives = 86/270 (31%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQS-YXXXXXXXXXXXXXYQS 598
PYG SQP GG Q Q G PP G A G P S Y
Sbjct: 1421 PYGSRPYSQP--PPGGPQPPT-QTVAGGPPAG-GAPGAPPSSAYPTGRPSQQDYYQPPPD 1476
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGP---------TQQTYPSYGSAPAPDSYN-QPPASA- 647
Q P + + + Q YP + P TQQ P Y S+PAP ++ PP A
Sbjct: 1477 QSPQPRRHPDFIKDSQPYPGYNARPQIYGAWQSGTQQYRPQYPSSPAPQNWGGAPPRGAA 1536
Query: 648 --PGYP------QQAGQAV---PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYP--EQ 694
PG P Q AG A YP G P Q P Q Q A P +Q
Sbjct: 1537 PPPGAPHGPPIQQPAGVAQWDQHRYPPQQGPPPPPQQQQQPQQQQQQPPYQQVAGPPGQQ 1596
Query: 695 PATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQ 754
P + + PG P+ Q + Q GV Q
Sbjct: 1597 PPQAPPQWAQMNPGQTAQSGIAPPGSPLRPPSGPGQQNRMPGMPAQQQQSQQQG--GVPQ 1654
Query: 755 GTAA-AGYGKTVSPQPGYPQYDSTQMYAAP 783
A +G P PG PQ M P
Sbjct: 1655 PPPQQASHGGV--PSPGLPQVGPGGMVKPP 1682
Score = 111 (44.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 54/172 (31%), Positives = 66/172 (38%)
Query: 534 HAPVQHPYGGHSNSQPV----YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXX 589
H P Q P + +P Y GG SGY + P G P +QP +Y
Sbjct: 1321 HGPGQVPPSPQQHVRPAAGAPYPPGG--SGYPT-PVSRTP-GSPYP-SQPGAYGQYGSSD 1375
Query: 590 XXXXXXYQSQVPSAQSYGPNVP-HQQQYP-YATSG---PT-QQTYPSYGSAPAPDSYNQP 643
Q P Q G P ++ YP Y G PT Y YGS P Y+QP
Sbjct: 1376 QYNATGPPGQ-PFGQGPGQYPPQNRNMYPPYGPEGEAPPTGANQYGPYGSRP----YSQP 1430
Query: 644 PASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
P PG PQ Q V P GG AP P++ Y +QQ Y + P
Sbjct: 1431 P---PGGPQPPTQTVAGGPPAGG--APG---APPSSAYPTGRPSQQDYYQPP 1474
Score = 107 (42.7 bits), Expect = 6.1e-06, Sum P(4) = 6.1e-06
Identities = 61/188 (32%), Positives = 69/188 (36%)
Query: 612 HQQQYP-YATSG-----PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA-VPNYPQP 664
HQQQ+P + G P QQ G P P PP + PQQ G VP P P
Sbjct: 1277 HQQQHPQHQHPGLPGPPPPQQQQGQQGQQPPPSVGGGPPPA----PQQHGPGQVP--PSP 1330
Query: 665 GGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG-YGYQGTQDXXXXXXXXXXXXXX 723
P+ G P G G T + P P S G YG G+ D
Sbjct: 1331 QQHVRPAAGAPYPPGGSGYPTPVSRT-PGSPYPSQPGAYGQYGSSDQYNA---------- 1379
Query: 724 XTGQPGYAQPAATQPS-YD-QSASQSTAYGV---AQGTAAAGYGKTVS-----PQPGYPQ 773
TG PG QP P Y Q+ + YG A T A YG S P PG PQ
Sbjct: 1380 -TGPPG--QPFGQGPGQYPPQNRNMYPPYGPEGEAPPTGANQYGPYGSRPYSQPPPGGPQ 1436
Query: 774 YDSTQMYA 781
TQ A
Sbjct: 1437 -PPTQTVA 1443
Score = 102 (41.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 68/255 (26%), Positives = 84/255 (32%)
Query: 540 PYGGHSNSQP-VYSQGGLQSGYHQH--QYGKPPY-----GMPAQGTQPQS---YXXXXXX 588
PY G+ N++P +Y G QSG Q+ QY P G P +G P +
Sbjct: 1493 PYPGY-NARPQIY--GAWQSGTQQYRPQYPSSPAPQNWGGAPPRGAAPPPGAPHGPPIQQ 1549
Query: 589 XXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAP 648
Q + P Q P P QQQ P QQ P Y P QPP AP
Sbjct: 1550 PAGVAQWDQHRYPPQQG-PPPPPQQQQQPQQ-----QQQQPPYQQVAGPPG-QQPP-QAP 1601
Query: 649 GYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYP--EQPATSNAGYGYQG 706
PQ A Q P G AP + P +G GQ N P +Q + G
Sbjct: 1602 --PQWA-QMNPGQTAQSGI-APPGSPLRPPSGPGQQ-NRMPGMPAQQQQSQQQGGVPQPP 1656
Query: 707 TQDXXXXXXXXXXXXXXXTG---QPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGK 763
Q G +P YA P Q Q G+ G+
Sbjct: 1657 PQQASHGGVPSPGLPQVGPGGMVKPPYAMPPPPSQGVGQQVGQGPPGGMMSQKPPPMPGQ 1716
Query: 764 TVSPQPGYPQYDSTQ 778
+ QP Q S Q
Sbjct: 1717 AMQQQPLQQQPPSHQ 1731
Score = 99 (39.9 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 48/167 (28%), Positives = 53/167 (31%)
Query: 534 HAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQY--GKPP--YGMPAQGTQPQSYXXXXXXX 589
H P P+ H+ +Q Q Q HQH G PP QG QP
Sbjct: 1259 HPPP--PHSPHTAAQQAAGQHQQQHPQHQHPGLPGPPPPQQQQGQQGQQPPPSVGGGPPP 1316
Query: 590 XXXXXXYQSQVPSAQSY------GPNVPHQQQYPYATSGPTQQTYPS----YGSAPAPDS 639
PS Q + P P YP S YPS YG + D
Sbjct: 1317 APQQHGPGQVPPSPQQHVRPAAGAPYPPGGSGYPTPVSRTPGSPYPSQPGAYGQYGSSDQ 1376
Query: 640 YNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQV--APTAGYGQY 684
YN PG P GQ YP P YG AP G QY
Sbjct: 1377 YNA--TGPPGQP--FGQGPGQYPPQNRNMYPPYGPEGEAPPTGANQY 1419
Score = 95 (38.5 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 46/160 (28%), Positives = 56/160 (35%)
Query: 627 TYPSYGSAPAPDSYNQPPASAP-----GYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGY 681
T S GS+ + DS+ PP SAP GYP G + P YP G Q P Y TAG
Sbjct: 1130 TTNSTGSSNSQDSFPAPPGSAPNAAIDGYPGYPGGS-P-YPVASGPQ-PDYA----TAGQ 1182
Query: 682 GQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYD 741
Q +Q P T + G G PG + T P
Sbjct: 1183 MQRPPSQN----NPQTPHPGAAAAVAAGDNISVSNPFEDPIAAGGGPG----SGTGPGPG 1234
Query: 742 QSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYA 781
Q A G A A G G P P + + + Q A
Sbjct: 1235 QGPGPGAASGGAGAVGAVGGGPQPHPPPPHSPHTAAQQAA 1274
Score = 94 (38.1 bits), Expect = 6.1e-06, Sum P(4) = 6.1e-06
Identities = 28/77 (36%), Positives = 30/77 (38%)
Query: 381 NQQAYRPRVPTGPPQWGPRGSHPSQP-MAYDYPQRGP--------YPSQNPHYPHLPYGN 431
NQ P PPQ G +P P M Y GP YP Q P P GN
Sbjct: 604 NQGMNNMATPPPPPQGAAGGGYPMPPHMHGGYKMGGPGQSPGAQGYPPQQPQ--QYPPGN 661
Query: 432 YPPQQMAPRSNYG-GPP 447
YPP+ P Y GPP
Sbjct: 662 YPPRPQYPPGAYATGPP 678
Score = 77 (32.2 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 29/77 (37%), Positives = 34/77 (44%)
Query: 376 LSGGFNQQAYRPRVPTGPPQW-GPRGSHPSQPMAYDY----PQRGPYPSQN--------P 422
L GG Q +P PPQ GP GS P++P Y P +GP P+ N P
Sbjct: 167 LPGGKPPQQQQPHPQQQPPQQPGPGGS-PNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPP 225
Query: 423 HYPHLPYGN-YPPQQMA 438
P Y N Y PQQ A
Sbjct: 226 PPPQHRYANTYDPQQAA 242
Score = 56 (24.8 bits), Expect = 6.1e-06, Sum P(4) = 6.1e-06
Identities = 28/97 (28%), Positives = 35/97 (36%)
Query: 529 GYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXX 588
GY + P Q P G + N P G+ G H G PP+G P P S
Sbjct: 780 GYGGSPTPPQGPQG-YGNG-PTGMHPGMPMG-PPHHMG-PPHG-PTNMGPPTSTPPQSQM 834
Query: 589 XXXXXXXYQSQVPSAQSYGPNVPH-QQQYPYATSGPT 624
Q +S GP H Q ++SGPT
Sbjct: 835 LQGGQPQGQGASGGPESGGPE--HISQDNGISSSGPT 869
Score = 52 (23.4 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 32/133 (24%), Positives = 41/133 (30%)
Query: 662 PQPGGQQAPSYGQVAPTAGYGQYTNTQ--QAYPEQPAT--------SNAGYGYQGTQDXX 711
P P G+QA S G A T T +A P AT SN+
Sbjct: 2527 PGPAGKQAASAGGSATVKAETASTETSSTEAKPAPAATTAVVNDENSNSSQQLPPAATFN 2586
Query: 712 XXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSA--SQSTAYGVAQGTAAAGYGKTVSPQP 769
T + T S+ SA SQS A AA G G +
Sbjct: 2587 DVSNSSTNSNSCGTASSNQTNNSTTNSSHSSSAISSQSAITVAAPSAAATGAGSATAAAI 2646
Query: 770 GYPQYDSTQMYAA 782
Q +++ AA
Sbjct: 2647 ASDQQQVSKVAAA 2659
Score = 38 (18.4 bits), Expect = 6.1e-06, Sum P(4) = 6.1e-06
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAA 295
EK+ + + GG+P+ A + A GAA
Sbjct: 3 EKIKSPQTQQQQQGGAPAPAATPPSAGAAPGAA 35
>UNIPROTKB|Q5RB68 [details] [associations]
symbol:IGF2BP2 "Insulin-like growth factor 2 mRNA-binding
protein 2" species:9601 "Pongo abelii" [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005856 "cytoskeleton"
evidence=ISS] [GO:0048027 "mRNA 5'-UTR binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 HOVERGEN:HBG052725 CTD:10644
GO:GO:0044430 EMBL:CR858786 RefSeq:NP_001125573.1 UniGene:Pab.13543
ProteinModelPortal:Q5RB68 SMR:Q5RB68 PRIDE:Q5RB68 GeneID:100172487
KEGG:pon:100172487 InParanoid:Q5RB68 Uniprot:Q5RB68
Length = 556
Score = 139 (54.0 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 391 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 448
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 449 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 496
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 497 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 538
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 52/163 (31%), Positives = 74/163 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI N VG LIGK G ++ +++ +G KI I+ D + R + + GT+ A
Sbjct: 278 KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASA 337
Query: 263 EKLINAVIAEA---D--AGGSPSLVARGLATAQASGA-------AEQ--VEIKVPNEKVG 308
E I + EA D A + S L G EQ V + +P + VG
Sbjct: 338 EIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVG 397
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
IIG+ G IK L +GA I++ P EG ER+V +TG
Sbjct: 398 AIIGKKGAHIKQLARFAGASIKIAPA---EGPDVSERMVIITG 437
>UNIPROTKB|E1BKJ7 [details] [associations]
symbol:IGF2BP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010610 "regulation of mRNA stability involved in response to
stress" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0045182 GO:GO:0048027 GO:GO:0003730
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 CTD:10642
GeneTree:ENSGT00530000063171 OMA:EQETVHV GO:GO:0010610
EMBL:DAAA02049054 EMBL:DAAA02049055 IPI:IPI00699469
RefSeq:NP_001179383.1 UniGene:Bt.27949 Ensembl:ENSBTAT00000015586
GeneID:516853 KEGG:bta:516853 NextBio:20872317 Uniprot:E1BKJ7
Length = 577
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 54/185 (29%), Positives = 84/185 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P VG +IGK G I+ L + A I+I P + R V I G KA
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA--PPETPDSKVRMVIITGPPEAQFKA 466
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I + E + G V L T I+VP G +IG+GG+T+ LQ
Sbjct: 467 QGRIYGKLKEENFFGPKEEVK--LET----------HIRVPASAAGRVIGKGGKTVNELQ 514
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+ A + + P D + + IV++ G ++AQ I+++L+Q V+ G NQ
Sbjct: 515 NLTAAEVVVPRDQTP--DENDQVIVKIIGHFYASQMAQRKIRDILAQ-VKQLHQKGQSNQ 571
Query: 383 -QAYR 386
QA R
Sbjct: 572 AQARR 576
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V++ +P + VG IIG+ G+ IK L + A I++ P PE SK R+V +TG
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP---PETPDSKVRMVIITG 458
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G + N +A
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRA 339
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 340 EQEIMKKVREA 350
>UNIPROTKB|E2RTC5 [details] [associations]
symbol:IGF2BP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IEA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IEA] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0010610 "regulation of mRNA stability involved in
response to stress" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0045182 GO:GO:0048027 GO:GO:0003730
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 CTD:10642
GeneTree:ENSGT00530000063171 OMA:EQETVHV GO:GO:0010610
EMBL:AAEX03006519 EMBL:AAEX03006520 RefSeq:XP_548184.2
ProteinModelPortal:E2RTC5 Ensembl:ENSCAFT00000026763 GeneID:491064
KEGG:cfa:491064 Uniprot:E2RTC5
Length = 577
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 54/185 (29%), Positives = 84/185 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P VG +IGK G I+ L + A I+I P + R V I G KA
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA--PPETPDSKVRMVIITGPPEAQFKA 466
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I + E + G V L T I+VP G +IG+GG+T+ LQ
Sbjct: 467 QGRIYGKLKEENFFGPKEEVK--LET----------HIRVPASAAGRVIGKGGKTVNELQ 514
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+ A + + P D + + IV++ G ++AQ I+++L+Q V+ G NQ
Sbjct: 515 NLTAAEVVVPRDQTP--DENDQVIVKIIGHFYASQMAQRKIRDILAQ-VKQLHQKGQSNQ 571
Query: 383 -QAYR 386
QA R
Sbjct: 572 AQARR 576
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V++ +P + VG IIG+ G+ IK L + A I++ P PE SK R+V +TG
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP---PETPDSKVRMVIITG 458
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G + N +A
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRA 339
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 340 EQEIMKKVREA 350
>UNIPROTKB|I3L9X2 [details] [associations]
symbol:IGF2BP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 CTD:10642 GeneTree:ENSGT00530000063171 OMA:EQETVHV
EMBL:FP312864 RefSeq:XP_003358128.1 Ensembl:ENSSSCT00000022825
GeneID:100620940 KEGG:ssc:100620940 Uniprot:I3L9X2
Length = 577
Score = 139 (54.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 54/185 (29%), Positives = 84/185 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P VG +IGK G I+ L + A I+I P + R V I G KA
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA--PPETPDSKVRMVIITGPPEAQFKA 466
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I + E + G V L T I+VP G +IG+GG+T+ LQ
Sbjct: 467 QGRIYGKLKEENFFGPKEEVK--LET----------HIRVPASAAGRVIGKGGKTVNELQ 514
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+ A + + P D + + IV++ G ++AQ I+++L+Q V+ G NQ
Sbjct: 515 NLTAAEVVVPRDQTP--DENDQVIVKIIGHFYASQMAQRKIRDILAQ-VKQLHQKGQSNQ 571
Query: 383 -QAYR 386
QA R
Sbjct: 572 AQARR 576
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V++ +P + VG IIG+ G+ IK L + A I++ P PE SK R+V +TG
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP---PETPDSKVRMVIITG 458
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G + N +A
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRA 339
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 340 EQEIMKKVREA 350
>UNIPROTKB|Q9Y6M1 [details] [associations]
symbol:IGF2BP2 "Insulin-like growth factor 2 mRNA-binding
protein 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IDA] [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA]
[GO:0017148 "negative regulation of translation" evidence=ISS]
[GO:0045182 "translation regulator activity" evidence=ISS]
[GO:0042035 "regulation of cytokine biosynthetic process"
evidence=IC] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0017148
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0045182 GO:GO:0048027
GO:GO:0003730 GO:GO:0042035 GO:GO:0009653 HOVERGEN:HBG052725
eggNOG:NOG249985 HOGENOM:HOG000000675 EMBL:AF057352 EMBL:EU408701
EMBL:EU408702 EMBL:EU408703 EMBL:AC016961 EMBL:AC108670
EMBL:BC021290 IPI:IPI00179713 IPI:IPI00180983 IPI:IPI00743914
IPI:IPI00922068 IPI:IPI00953576 RefSeq:NP_001007226.1
RefSeq:NP_006539.3 UniGene:Hs.35354 PDB:2CQH PDBsum:2CQH
ProteinModelPortal:Q9Y6M1 SMR:Q9Y6M1 IntAct:Q9Y6M1 STRING:Q9Y6M1
PhosphoSite:Q9Y6M1 DMDM:224471831 PaxDb:Q9Y6M1 PRIDE:Q9Y6M1
DNASU:10644 Ensembl:ENST00000346192 Ensembl:ENST00000382199
Ensembl:ENST00000421047 GeneID:10644 KEGG:hsa:10644 UCSC:uc003fpo.3
UCSC:uc003fpp.3 UCSC:uc010hyi.3 UCSC:uc010hyj.3 UCSC:uc010hyl.3
CTD:10644 GeneCards:GC03M185361 HGNC:HGNC:28867 HPA:CAB017126
MIM:608289 neXtProt:NX_Q9Y6M1 PharmGKB:PA128394577
OrthoDB:EOG4FBHSJ ChiTaRS:IGF2BP2 EvolutionaryTrace:Q9Y6M1
GenomeRNAi:10644 NextBio:40455 ArrayExpress:Q9Y6M1 Bgee:Q9Y6M1
CleanEx:HS_IGF2BP2 Genevestigator:Q9Y6M1 GermOnline:ENSG00000073792
GO:GO:0044430 Uniprot:Q9Y6M1
Length = 599
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 434 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 491
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 492 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 539
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 540 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 581
Score = 138 (53.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 63/253 (24%), Positives = 114/253 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 254
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV--PNEKVGLIIGRGGETIKG 320
++I ++ + A + AE++ +K+ N VG +IG+ G +K
Sbjct: 255 CRMILEIMQKE---------------ADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKK 299
Query: 321 LQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV--- 371
++ +G +I + Q L + ER + V G + +IEI +++ +E +
Sbjct: 300 IEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKL-REAFENDMLAV 356
Query: 372 -RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL 427
+ + L G N A + + P GPRG+ P+ P G + S PH+
Sbjct: 357 NQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFG 416
Query: 428 PYGN---YPPQQM 437
P+ + YP Q++
Sbjct: 417 PFPHHHSYPEQEI 429
>UNIPROTKB|E1BFI4 [details] [associations]
symbol:IGF2BP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0044430
"cytoskeletal part" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003730 "mRNA
3'-UTR binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048027 GO:GO:0003730 GeneTree:ENSGT00530000063171 CTD:10644
GO:GO:0044430 OMA:KQQEQKH EMBL:DAAA02001852 EMBL:DAAA02001853
EMBL:DAAA02001854 EMBL:DAAA02001855 EMBL:DAAA02001856
IPI:IPI00721408 RefSeq:NP_001179433.1 UniGene:Bt.33805
ProteinModelPortal:E1BFI4 Ensembl:ENSBTAT00000036032 GeneID:519028
KEGG:bta:519028 NextBio:20872792 Uniprot:E1BFI4
Length = 599
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 434 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 491
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 492 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 539
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 540 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 581
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 66/254 (25%), Positives = 116/254 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 197 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 254
Query: 263 EKLINAVIA-EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
++I ++ EAD + +A + ++I N VG +IG+ G +K +
Sbjct: 255 CRMILEIMQKEADE----TKLAEEIP----------LKILAHNGLVGRLIGKEGRNLKKI 300
Query: 322 QTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV---- 371
+ +G +I + Q L + ER + V G + +IEI +++ +E +
Sbjct: 301 EHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKL-REAFENDMLAVN 357
Query: 372 RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPS-QNPH---- 423
+ + L G N A + + PP GPRG+ P+ P G + S PH
Sbjct: 358 QQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGP 417
Query: 424 YPHLPYGNYPPQQM 437
+PH + +YP Q++
Sbjct: 418 FPH--HHSYPEQEI 429
>SGD|S000000128 [details] [associations]
symbol:HEK2 "RNA binding protein involved in asymmetric
localization of ASH1 mRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0008298 "intracellular mRNA localization" evidence=IMP;IPI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0007004 "telomere maintenance via
telomerase" evidence=IMP;IPI] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0000784 "nuclear chromosome, telomeric region"
evidence=IDA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0048255
"mRNA stabilization" evidence=IGI;IMP] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014
PROSITE:PS50084 SMART:SM00322 SGD:S000000128 GO:GO:0006417
GO:GO:0003729 GO:GO:0016568 EMBL:BK006936 GO:GO:0048255 EMBL:X77291
GO:GO:0000932 GO:GO:0008298 GO:GO:0051028 GO:GO:0000784
GO:GO:0007004 EMBL:Z35793 EMBL:AY692814 PIR:S45766
RefSeq:NP_009521.1 ProteinModelPortal:P38199 SMR:P38199
DIP:DIP-3934N IntAct:P38199 MINT:MINT-506819 STRING:P38199
PaxDb:P38199 PeptideAtlas:P38199 EnsemblFungi:YBL032W GeneID:852248
KEGG:sce:YBL032W CYGD:YBL032w eggNOG:NOG294694 OMA:NSHISSI
OrthoDB:EOG4Z65XM NextBio:970814 Genevestigator:P38199
GermOnline:YBL032W Uniprot:P38199
Length = 381
Score = 136 (52.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 47/177 (26%), Positives = 92/177 (51%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG---TLSN- 258
++ V N+ + +IGKAG TI+ L G KI ++D P + R +EI G +++N
Sbjct: 160 RLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFL--PASDERIIEIQGFPGSITNV 217
Query: 259 -IDKAEKLINAVIAEADAGGS--PSLV-ARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I+ +E +++ V S P L + G T+ ++ + ++E+K+P VG IIGRG
Sbjct: 218 LIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAIIGRG 277
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
IK L+T + I + + + D + + + + + +++A+ M+ + L+ +
Sbjct: 278 MNRIKNLKTFTKTNIVVERKDDDDKDENFRKFIITSKFPKNVKLAESMLLKNLNTEI 334
>UNIPROTKB|F8W930 [details] [associations]
symbol:IGF2BP2 "Insulin-like growth factor 2 mRNA-binding
protein 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 SMART:SM00322 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC016961 EMBL:AC108670
IPI:IPI00953576 HGNC:HGNC:28867 ChiTaRS:IGF2BP2 OMA:KQQEQKH
ProteinModelPortal:F8W930 SMR:F8W930 PRIDE:F8W930
Ensembl:ENST00000457616 UCSC:uc003fpq.3 ArrayExpress:F8W930
Bgee:F8W930 Uniprot:F8W930
Length = 605
Score = 139 (54.0 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L +GA I+I A+ P + R V I G KA+
Sbjct: 440 IPTQAVGAIIGKKGAHIKQLARFAGASIKIA-PAEG-PDVSERMVIITGPPEAQFKAQGR 497
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + V + I+VP+ G +IG+GG+T+ LQ +
Sbjct: 498 IFGKLKEENFFNPKEEVKL------------EAHIRVPSSTAGRVIGKGGKTVNELQNLT 545
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
A + ++P+ D ++E IVR+ G + AQ I+E++ Q
Sbjct: 546 SAEV-IVPRDQTP-DENEEVIVRIIGHFFASQTAQRKIREIVQQ 587
Score = 138 (53.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 63/253 (24%), Positives = 114/253 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG +IGK G TI+ + + +++ I R ++ AA +PV I T +A
Sbjct: 203 RILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSG--AAEKPVTIHATPEGTSEA 260
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV--PNEKVGLIIGRGGETIKG 320
++I ++ + A + AE++ +K+ N VG +IG+ G +K
Sbjct: 261 CRMILEIMQKE---------------ADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKK 305
Query: 321 LQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMR-----QIEIAQEMIKEVLSQTV--- 371
++ +G +I + Q L + ER + V G + +IEI +++ +E +
Sbjct: 306 IEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKL-REAFENDMLAV 362
Query: 372 -RPSTLSGGFNQQA---YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL 427
+ + L G N A + + P GPRG+ P+ P G + S PH+
Sbjct: 363 NQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFG 422
Query: 428 PYGN---YPPQQM 437
P+ + YP Q++
Sbjct: 423 PFPHHHSYPEQEI 435
>UNIPROTKB|P35637 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008219 GO:GO:0008270 Reactome:REACT_1675
Gene3D:3.30.70.330 GO:GO:0003723 Orphanet:803 GO:GO:0000398
EMBL:AJ295163 MIM:612160 eggNOG:NOG240581 KO:K13098 Orphanet:275872
Orphanet:79105 EMBL:S62138 PIR:S33798 HOGENOM:HOG000038010 CTD:2521
ChiTaRS:FUS OrthoDB:EOG4DV5NH EMBL:S62140 EMBL:X71427 EMBL:X71428
EMBL:AF071213 EMBL:AC009088 EMBL:BC000402 EMBL:BC002459
IPI:IPI00221354 IPI:IPI00260715 PIR:S33799 RefSeq:NP_001164105.1
RefSeq:NP_004951.1 UniGene:Hs.46894 PDB:2LA6 PDB:2LCW PDB:4FDD
PDBsum:2LA6 PDBsum:2LCW PDBsum:4FDD ProteinModelPortal:P35637
SMR:P35637 DIP:DIP-29857N IntAct:P35637 MINT:MINT-5005976
STRING:P35637 PhosphoSite:P35637 DMDM:544357 PaxDb:P35637
PRIDE:P35637 DNASU:2521 Ensembl:ENST00000254108
Ensembl:ENST00000380244 GeneID:2521 KEGG:hsa:2521 UCSC:uc002ebe.2
UCSC:uc002ebh.3 GeneCards:GC16P031191 HGNC:HGNC:4010 HPA:HPA008784
MIM:137070 MIM:608030 MIM:614782 neXtProt:NX_P35637 Orphanet:99967
PharmGKB:PA28425 HOVERGEN:HBG095056 InParanoid:P35637 OMA:YGTQSTP
PhylomeDB:P35637 GenomeRNAi:2521 NextBio:9927 ArrayExpress:P35637
Bgee:P35637 CleanEx:HS_FUS Genevestigator:P35637
GermOnline:ENSG00000089280 Uniprot:P35637
Length = 526
Score = 138 (53.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 54/172 (31%), Positives = 74/172 (43%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ S Y Q
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSSQ-------PYGQQSYSGYSQSTD 46
Query: 678 TAGYGQ--YTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ--- 732
T+GYGQ Y++ Q+ T + GY G+ + PGY Q
Sbjct: 47 TSGYGQSSYSSYGQSQNTGYGTQSTPQGY-GSTGGYGSSQSSQSSYGQQSSYPGYGQQPA 105
Query: 733 PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
P++T SY S+SQS++YG Q + Y + S Y Q Y P+
Sbjct: 106 PSSTSGSYG-SSSQSSSYGQPQ---SGSYSQQPSYGGQQQSYGQQQSYNPPQ 153
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 64/191 (33%), Positives = 70/191 (36%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ---GTQ--PQS 581
G GY + PYG S S YSQ SGY Q Y YG GTQ PQ
Sbjct: 22 GQGYSQQSS---QPYGQQSYSG--YSQSTDTSGYGQSSYSS--YGQSQNTGYGTQSTPQG 74
Query: 582 YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGP--TQQTYPSYGSAPAPDS 639
Y QS SY P QQ P +TSG + SYG P S
Sbjct: 75 YGSTGGYGSSQSS--QSSYGQQSSY-PGYG-QQPAPSSTSGSYGSSSQSSSYGQ-PQSGS 129
Query: 640 YNQPPASAPGYPQQAGQAVP-NYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATS 698
Y+Q P S G Q GQ N PQ GQQ G G N Q +
Sbjct: 130 YSQQP-SYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGG 188
Query: 699 NAGYGYQGTQD 709
+G GY G QD
Sbjct: 189 GSGGGY-GNQD 198
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/160 (30%), Positives = 63/160 (39%)
Query: 602 SAQSYG--PNVPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
+ QSYG P P Q Y +S P QQ+Y Y + Y Q S+ G Q G
Sbjct: 10 ATQSYGAYPTQPGQG-YSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGT 68
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXX 718
+ PQ YG T GYG ++Q +Y +Q +S GYG Q
Sbjct: 69 QSTPQ-------GYGS---TGGYGSSQSSQSSYGQQ--SSYPGYGQQPAPSSTSGSYGSS 116
Query: 719 XXXXXXTGQPGYAQPAATQPSY---DQSASQSTAYGVAQG 755
GQP + + QPSY QS Q +Y QG
Sbjct: 117 SQSSSY-GQP-QSGSYSQQPSYGGQQQSYGQQQSYNPPQG 154
>UNIPROTKB|H3BPE7 [details] [associations]
symbol:FUS "RNA-binding protein FUS" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
ChiTaRS:FUS EMBL:AC009088 HGNC:HGNC:4010 ProteinModelPortal:H3BPE7
SMR:H3BPE7 Ensembl:ENST00000568685 Bgee:H3BPE7 Uniprot:H3BPE7
Length = 527
Score = 138 (53.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 54/172 (31%), Positives = 74/172 (43%)
Query: 619 ATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPS-YGQVAP 677
A++ TQQ SYG+ P QP GY QQ+ Q P GQQ+ S Y Q
Sbjct: 2 ASNDYTQQATQSYGAYPT-----QP---GQGYSQQSSQ-------PYGQQSYSGYSQSTD 46
Query: 678 TAGYGQ--YTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ--- 732
T+GYGQ Y++ Q+ T + GY G+ + PGY Q
Sbjct: 47 TSGYGQSSYSSYGQSQNTGYGTQSTPQGY-GSTGGYGSSQSSQSSYGQQSSYPGYGQQPA 105
Query: 733 PAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
P++T SY S+SQS++YG Q + Y + S Y Q Y P+
Sbjct: 106 PSSTSGSYG-SSSQSSSYGQPQ---SGSYSQQPSYGGQQQSYGQQQSYNPPQ 153
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 64/191 (33%), Positives = 70/191 (36%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQ---GTQ--PQS 581
G GY + PYG S S YSQ SGY Q Y YG GTQ PQ
Sbjct: 22 GQGYSQQSS---QPYGQQSYSG--YSQSTDTSGYGQSSYSS--YGQSQNTGYGTQSTPQG 74
Query: 582 YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGP--TQQTYPSYGSAPAPDS 639
Y QS SY P QQ P +TSG + SYG P S
Sbjct: 75 YGSTGGYGSSQSS--QSSYGQQSSY-PGYG-QQPAPSSTSGSYGSSSQSSSYGQ-PQSGS 129
Query: 640 YNQPPASAPGYPQQAGQAVP-NYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATS 698
Y+Q P S G Q GQ N PQ GQQ G G N Q +
Sbjct: 130 YSQQP-SYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGG 188
Query: 699 NAGYGYQGTQD 709
+G GY G QD
Sbjct: 189 GSGGGY-GNQD 198
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/160 (30%), Positives = 63/160 (39%)
Query: 602 SAQSYG--PNVPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAV 658
+ QSYG P P Q Y +S P QQ+Y Y + Y Q S+ G Q G
Sbjct: 10 ATQSYGAYPTQPGQG-YSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGT 68
Query: 659 PNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXX 718
+ PQ YG T GYG ++Q +Y +Q +S GYG Q
Sbjct: 69 QSTPQ-------GYGS---TGGYGSSQSSQSSYGQQ--SSYPGYGQQPAPSSTSGSYGSS 116
Query: 719 XXXXXXTGQPGYAQPAATQPSY---DQSASQSTAYGVAQG 755
GQP + + QPSY QS Q +Y QG
Sbjct: 117 SQSSSY-GQP-QSGSYSQQPSYGGQQQSYGQQQSYNPPQG 154
>RGD|628797 [details] [associations]
symbol:Prpmp5 "proline-rich protein MP5" species:10116 "Rattus
norvegicus" [GO:0005576 "extracellular region" evidence=IEA]
RGD:628797 GO:GO:0005576 InterPro:IPR026086 PANTHER:PTHR23203
CTD:5542 KO:K13911 EMBL:L17318 EMBL:M11899 IPI:IPI00187926
PIR:B48013 RefSeq:NP_742062.1 UniGene:Rn.29950 GeneID:257651
KEGG:rno:257651 UCSC:RGD:628797 NextBio:624204
Genevestigator:P10165 Uniprot:P10165
Length = 295
Score = 93 (37.8 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 45/136 (33%), Positives = 49/136 (36%)
Query: 540 PYGGHSNS-QPVYSQGGLQSGYHQHQ--YGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXY 596
P GG QP QG G Q + G PP G P + QP S
Sbjct: 166 PQGGPQRPPQPGSPQGPPPPGGPQQRAPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRPP 225
Query: 597 QSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQ 656
Q P P P Q P GP Q+ P G P P Q P PG PQ G
Sbjct: 226 QGPPPQGGPQRPPQPGSPQGPPPPGGPQQR--PPQG--PPPQGGPQRPPQ-PGNPQ--G- 277
Query: 657 AVPNYPQPGGQQAPSY 672
P PQ GGQQ S+
Sbjct: 278 --P--PQQGGQQQSSF 289
Score = 88 (36.0 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 50/161 (31%), Positives = 53/161 (32%)
Query: 540 PYGGHSNS-QPVYSQGGLQSGYHQHQYGKPPYGMPAQG---TQPQSYXXXXXXXXXXXXX 595
P GG QP QG G Q +PP G P QG PQ
Sbjct: 134 PQGGPQRPPQPGSPQGPPPPGGPQQ---RPPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQ 190
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAG 655
Q P Q GP P Q P + GP P G P PP P P Q G
Sbjct: 191 RAPQGPPPQG-GPQRPPQ---PGSPQGPP----PPGGPQQRPPQ-GPPPQGGPQRPPQPG 241
Query: 656 QAVPNYPQPGG-QQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
P PGG QQ P G P G G Q P+ P
Sbjct: 242 SP-QGPPPPGGPQQRPPQGP--PPQG-GPQRPPQPGNPQGP 278
Score = 85 (35.0 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 23/60 (38%), Positives = 25/60 (41%)
Query: 390 PTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG--NYPPQQMAPRSNYGGPP 447
P PPQ G HP P PQR P P +P P P G PPQ P+ PP
Sbjct: 84 PERPPQHGGNHHHPHHPPPAAGPQRPPQPG-SPQGPPPPGGPQQRPPQGPPPQGGPQRPP 142
Score = 85 (35.0 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 25/69 (36%), Positives = 30/69 (43%)
Query: 382 QQAYRPRVPTGPPQ-WGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG--NYPPQQMA 438
Q+ +P P GPP GP+ P P PQR P P +P P P G PPQ
Sbjct: 107 QRPPQPGSPQGPPPPGGPQQRPPQGPPPQGGPQRPPQPG-SPQGPPPPGGPQQRPPQGPP 165
Query: 439 PRSNYGGPP 447
P+ PP
Sbjct: 166 PQGGPQRPP 174
Score = 38 (18.4 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 42 KNSDEVEKNVDGFAEAHGSEVKRP 65
+N D + N DG + G +V RP
Sbjct: 62 ENGDG-DDNDDGDDDGSGDDVNRP 84
>UNIPROTKB|F8VW64 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003729 GO:GO:0000398 HGNC:HGNC:7886
ChiTaRS:NOVA1 EMBL:AL079343 EMBL:AL132716 IPI:IPI01020950
ProteinModelPortal:F8VW64 SMR:F8VW64 Ensembl:ENST00000549146
ArrayExpress:F8VW64 Bgee:F8VW64 Uniprot:F8VW64
Length = 96
Score = 114 (45.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 245 AATRPVEIIG--TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKV 302
A T PV I+ T N D+ ++ + + SP+ + + A QV+I V
Sbjct: 6 AKTEPVSILQPQTTVNPDRIKQTLPS---------SPTTTKSSPSDPMTTSRANQVKIIV 56
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
PN GLIIG+GG T+K + +SGA +QL + P+G +E
Sbjct: 57 PNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PDGINLQE 96
>UNIPROTKB|P71590 [details] [associations]
symbol:fhaA "FHA domain-containing protein FhaA"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005829 GO:GO:0005618 GenomeReviews:AL123456_GR
EMBL:BX842572 Gene3D:2.60.200.20 SUPFAM:SSF49879 PIR:B70700
RefSeq:NP_214534.1 RefSeq:YP_006513334.1 PDB:2LC0 PDB:2LC1 PDB:3OUN
PDB:3PO8 PDB:3POA PDBsum:2LC0 PDBsum:2LC1 PDBsum:3OUN PDBsum:3PO8
PDBsum:3POA ProteinModelPortal:P71590 SMR:P71590 DIP:DIP-59047N
PhosSite:P12071703 PRIDE:P71590 EnsemblBacteria:EBMYCT00000001781
GeneID:13315997 GeneID:887067 KEGG:mtu:Rv0020c KEGG:mtv:RVBD_0020c
PATRIC:18148538 TubercuList:Rv0020c HOGENOM:HOG000235804
OMA:DQGYGQP ProtClustDB:CLSK790198 EvolutionaryTrace:P71590
InterPro:IPR022128 Pfam:PF12401 Uniprot:P71590
Length = 527
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 70/260 (26%), Positives = 89/260 (34%)
Query: 530 YDDNHA-PVQHPYGGHSNSQPVYSQGGL--QSGYHQHQYGKPPYGMPAQGTQPQSYXXXX 586
YDD +A P + P GG +GG ++G + Q G P P QG P+
Sbjct: 175 YDDRYARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPDQGDYPEQIGYPD 234
Query: 587 XXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQ-QTYPSYGSAPAPDSYNQ-PP 644
Q P + Y P Q+ YP Q + YP G P Y Q PP
Sbjct: 235 ----------QGGYPEQRGY----PEQRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPP 280
Query: 645 AS--------APGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAY----P 692
S APGY Q Q+ P PGG Q P YG G G + + +Y P
Sbjct: 281 VSPGPAAGYGAPGYDQGYRQSGGYGPSPGGGQ-PGYGGYGEY-GRGPARHEEGSYVPSGP 338
Query: 693 EQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGV 752
P Y QG D G Y + + P A Q Y
Sbjct: 339 PGPPEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTES-PRVPGYAPQGGGYAE 397
Query: 753 AQGTAAAGYGKTVSPQPGYP 772
G YG++ +P G P
Sbjct: 398 PAGRDY-DYGQSGAPDYGQP 416
Score = 110 (43.8 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 53/173 (30%), Positives = 59/173 (34%)
Query: 527 GHGY-DDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXX 585
G GY D PY P + G GY Q YG G QP
Sbjct: 260 GRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGYGPSPGGGQPGYGGYG 319
Query: 586 XXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPS---------YGSAPA 636
S VPS GP P +Q+ Y G Q Y YG
Sbjct: 320 EYGRGPARHEEGSYVPS----GPPGPPEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGAD 375
Query: 637 PDSYNQPPASAPGY-PQQAGQAVP---NYPQPGGQQAPSYGQVAPT--AGYGQ 683
Y + P PGY PQ G A P +Y G AP YGQ AP +GYGQ
Sbjct: 376 YTRYTESPR-VPGYAPQGGGYAEPAGRDYDY-GQSGAPDYGQPAPGGYSGYGQ 426
Score = 74 (31.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 23/61 (37%), Positives = 27/61 (44%)
Query: 390 PTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP---HLPYGNYPPQQMAPRSNYGGP 446
P P+ GP S P P+ G YP Q P YP H G+YP Q P + GG
Sbjct: 182 PQEDPRGGPDPQGGSDPRGGYPPETGGYPPQ-PGYPRPRHPDQGDYPEQIGYP--DQGGY 238
Query: 447 P 447
P
Sbjct: 239 P 239
>UNIPROTKB|F1RFI8 [details] [associations]
symbol:EWSR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102
PROSITE:PS50199 SMART:SM00360 SMART:SM00547 GO:GO:0005634
GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063105 OMA:EGTSTGY EMBL:CU640468
EMBL:CT737304 Ensembl:ENSSSCT00000010930 Uniprot:F1RFI8
Length = 606
Score = 138 (53.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 58/193 (30%), Positives = 78/193 (40%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPV-YSQGGLQSGYHQH----QYGKPPYGMPAQGTQPQS 581
G+ A Q YG + V Y+Q + Y Q YG+PP G T PQ+
Sbjct: 28 GYAQTTQQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTP-TAPQA 86
Query: 582 YXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPA---PD 638
Y Y + + + + Q Y G TQ YP+YG PA P
Sbjct: 87 YSQPVQGYGTGA--YDTTTATVTTTQASYAAQSAY-----G-TQPAYPAYGQQPAATAPA 138
Query: 639 SYN--QPPA-SAPGYPQQAGQAVPN-YPQPG--GQQAPSYGQVAPTAGYGQYTNTQQAYP 692
SY+ QP + Y QQ P+ Y Q GQQ+ SYGQ PT+ Y T + P
Sbjct: 139 SYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQPPTS-YPPQTGSYSQAP 196
Query: 693 EQPATSNAGYGYQ 705
Q + ++ YG Q
Sbjct: 197 SQYSQQSSSYGQQ 209
>UNIPROTKB|F1M8T3 [details] [associations]
symbol:F1M8T3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF13014
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074311 IPI:IPI00780141
Ensembl:ENSRNOT00000055638 OMA:SISEGNC Uniprot:F1M8T3
Length = 214
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 59/233 (25%), Positives = 110/233 (47%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ ++ + +VG +IGK G++++ ++ SGA+I I+ + + R + + G +N
Sbjct: 3 TLTIRLLMHGKEVGSIIGKDGESVKKMRKESGARISIS-----EGNCPERIITLAGP-TN 56
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+I+ + E D S + +TA AS V + VP + G +IG+GG I
Sbjct: 57 FKSFAMIIDKL--EEDISSSMTN-----STA-ASRPRVTVWLVVPASQCGSLIGKGGCKI 108
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI-----EIAQEMIKEVLSQTVRP 373
K ++ +G ++Q+ LP S ER + + G + I +I M+K LSQ+ +
Sbjct: 109 KEIRESTGVQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLK-TLSQSPKG 164
Query: 374 STLSGGFNQQAYRPRVPTGPPQWGPRGSHP-SQPMAYDYPQRGPYPSQNPHYP 425
T+ + + P + TG + +G + QP D + Q H+P
Sbjct: 165 VTIP--YLPKPSSPVIFTGGQAYTIQGRYAVPQP---DLTKLHRLAMQQSHFP 212
>UNIPROTKB|O42254 [details] [associations]
symbol:IGF2BP1 "Insulin-like growth factor 2 mRNA-binding
protein 1" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0010610 "regulation
of mRNA stability involved in response to stress" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0070934
"CRD-mediated mRNA stabilization" evidence=IEA] [GO:0070937
"CRD-mediated mRNA stability complex" evidence=ISS] [GO:0003730
"mRNA 3'-UTR binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR012677
Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084 PROSITE:PS50102
SMART:SM00322 SMART:SM00360 GO:GO:0005886 GO:GO:0005634
GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0045182
GO:GO:0048027 GO:GO:0003730 GO:GO:0010494 GO:GO:0070937
GO:GO:0070934 HSSP:Q9Y6M1 HOVERGEN:HBG052725 EMBL:AF026527
IPI:IPI00576155 RefSeq:NP_990402.1 UniGene:Gga.567
ProteinModelPortal:O42254 SMR:O42254 Ensembl:ENSGALT00000001975
GeneID:395953 KEGG:gga:395953 CTD:10642 eggNOG:NOG249985
GeneTree:ENSGT00530000063171 HOGENOM:HOG000000675 InParanoid:O42254
OMA:EQETVHV OrthoDB:EOG405S0T NextBio:20816018 GO:GO:0010610
Uniprot:O42254
Length = 576
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/182 (29%), Positives = 82/182 (45%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG +IGK G I+ L + A I+I P + R V I G KA+
Sbjct: 411 IPAQAVGAIIGKKGQHIKQLSRFASASIKIA--PPETPDSKVRMVVITGPPEAQFKAQGR 468
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I + E + G V L T I+VP G +IG+GG+T+ LQ +
Sbjct: 469 IYGKLKEENFFGPKEEVK--LET----------HIRVPASAAGRVIGKGGKTVNELQNLT 516
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ-QA 384
A + + P D +++ IV++ G ++AQ I+++L+Q V+ G Q QA
Sbjct: 517 AAEVVVPRDQTP--DENEQVIVKIIGHFYASQMAQRKIRDILAQ-VKQQHQKGQSGQLQA 573
Query: 385 YR 386
R
Sbjct: 574 RR 575
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V + +P + VG IIG+ G+ IK L + A I++ P PE SK R+V +TG
Sbjct: 405 ETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP---PETPDSKVRMVVITG 457
Score = 91 (37.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G++ N KA
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCKA 339
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 340 EQEIMKKVREA 350
>UNIPROTKB|G5EF87 [details] [associations]
symbol:swsn-1 "SWI3-like protein" species:6239
"Caenorhabditis elegans" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0040018
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 GeneTree:ENSGT00390000018166 EMBL:AF230279
PIR:T26449 RefSeq:NP_001256906.1 UniGene:Cel.7072 SMR:G5EF87
IntAct:G5EF87 EnsemblMetazoa:Y113G7B.23 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 WormBase:Y113G7B.23a
OMA:HFDELEQ NextBio:908892 Uniprot:G5EF87
Length = 789
Score = 145 (56.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 55/164 (33%), Positives = 59/164 (35%)
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXX 594
APVQ P + Q GG G Q Y PP QG Q Y
Sbjct: 609 APVQAPQAPQAPPQAYQGYGG-PGGPPQQAYRYPPQ----QGQQYSPYPPPQQQQQHQAQ 663
Query: 595 XYQSQV---PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
QSQ P GP P Q Q Y P Q Y G P P +PP A YP
Sbjct: 664 QAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYP-PQQ-QRPPYQAQPYP 721
Query: 652 ------QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQ 689
QQ G P PQPG YGQ+ P +GQY QQ
Sbjct: 722 GPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPP-HGQYQPQQQ 764
Score = 41 (19.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 292 SGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD 340
SGAA +VE+ EK G+ + L + PQ L EG+
Sbjct: 28 SGAAVKVEVPKGKEKDAEFSAPKGQKLTDLDEEGVQSTKEAPQ-LAEGN 75
>WB|WBGene00017816 [details] [associations]
symbol:F26B1.2b species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0007126 "meiosis" evidence=IMP] [GO:0045132 "meiotic chromosome
segregation" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0009792
GO:GO:0006974 GO:GO:0003723 GO:GO:0045132 eggNOG:NOG285495
GeneTree:ENSGT00550000074311 HOGENOM:HOG000019764 KO:K12886
HSSP:P61978 EMBL:FO080500 OMA:INPWANG PIR:T30168 RefSeq:NP_740869.1
ProteinModelPortal:P91277 SMR:P91277 DIP:DIP-27318N IntAct:P91277
MINT:MINT-1054372 STRING:P91277 PaxDb:P91277 PRIDE:P91277
EnsemblMetazoa:F26B1.2a GeneID:172330 KEGG:cel:CELE_F26B1.2
UCSC:F26B1.2c.3 CTD:172330 WormBase:F26B1.2a InParanoid:P91277
NextBio:875055 ArrayExpress:P91277 Uniprot:P91277
Length = 397
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 277 GSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHL 336
G+P+ G G ++ +P++ G IIGRGGE I ++ SGA+I L
Sbjct: 299 GAPNNAGYGYGPG-GGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITL----- 352
Query: 337 PEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+ +G ERI+ + G +QI AQ ++++ + + + GG
Sbjct: 353 EQSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQGRERFGG 395
Score = 89 (36.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
G A G E V + V ++ G IIG+GGE IK L+ A +Q+ + PE
Sbjct: 40 GFTEAIQQGKFE-VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPE------ 92
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
R+ VT D + + ++K+VL
Sbjct: 93 RVCTVTADEKTV---LNILKDVL 112
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 29/84 (34%), Positives = 35/84 (41%)
Query: 629 PSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAP-TAGYGQ---Y 684
P PAP Q P PG P+ G A+ Q GGQ++ G G G Y
Sbjct: 231 PPNNRGPAPQRGGQGP---PGGPRSYGGAIT---QGGGQRSFEAGDFQQFRGGPGPVPGY 284
Query: 685 TNTQQAYPEQP----ATSNAGYGY 704
+ YP Q A +NAGYGY
Sbjct: 285 AMSAPGYPPQQGQFGAPNNAGYGY 308
Score = 54 (24.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 418 PSQNPHYPHLPYGNYPPQQMAPRSNYGG-PPNM 449
P + P+LP NY P + S+YGG P NM
Sbjct: 197 PIKGSATPYLPAFNYDPSNI---SDYGGFPGNM 226
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
V + G LIG+ G I+ L+ A+++I
Sbjct: 131 VHQSHAGALIGRNGSKIKELREKCSARLKI 160
>UNIPROTKB|P91277 [details] [associations]
symbol:F26B1.2 "Protein F26B1.2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0009792 GO:GO:0006974
GO:GO:0003723 GO:GO:0045132 eggNOG:NOG285495
GeneTree:ENSGT00550000074311 HOGENOM:HOG000019764 KO:K12886
HSSP:P61978 EMBL:FO080500 OMA:INPWANG PIR:T30168 RefSeq:NP_740869.1
ProteinModelPortal:P91277 SMR:P91277 DIP:DIP-27318N IntAct:P91277
MINT:MINT-1054372 STRING:P91277 PaxDb:P91277 PRIDE:P91277
EnsemblMetazoa:F26B1.2a GeneID:172330 KEGG:cel:CELE_F26B1.2
UCSC:F26B1.2c.3 CTD:172330 WormBase:F26B1.2a InParanoid:P91277
NextBio:875055 ArrayExpress:P91277 Uniprot:P91277
Length = 397
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/103 (29%), Positives = 52/103 (50%)
Query: 277 GSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHL 336
G+P+ G G ++ +P++ G IIGRGGE I ++ SGA+I L
Sbjct: 299 GAPNNAGYGYGPG-GGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITL----- 352
Query: 337 PEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+ +G ERI+ + G +QI AQ ++++ + + + GG
Sbjct: 353 EQSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQGRERFGG 395
Score = 89 (36.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
G A G E V + V ++ G IIG+GGE IK L+ A +Q+ + PE
Sbjct: 40 GFTEAIQQGKFE-VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPE------ 92
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
R+ VT D + + ++K+VL
Sbjct: 93 RVCTVTADEKTV---LNILKDVL 112
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 29/84 (34%), Positives = 35/84 (41%)
Query: 629 PSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAP-TAGYGQ---Y 684
P PAP Q P PG P+ G A+ Q GGQ++ G G G Y
Sbjct: 231 PPNNRGPAPQRGGQGP---PGGPRSYGGAIT---QGGGQRSFEAGDFQQFRGGPGPVPGY 284
Query: 685 TNTQQAYPEQP----ATSNAGYGY 704
+ YP Q A +NAGYGY
Sbjct: 285 AMSAPGYPPQQGQFGAPNNAGYGY 308
Score = 54 (24.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 418 PSQNPHYPHLPYGNYPPQQMAPRSNYGG-PPNM 449
P + P+LP NY P + S+YGG P NM
Sbjct: 197 PIKGSATPYLPAFNYDPSNI---SDYGGFPGNM 226
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
V + G LIG+ G I+ L+ A+++I
Sbjct: 131 VHQSHAGALIGRNGSKIKELREKCSARLKI 160
>ZFIN|ZDB-GENE-080220-35 [details] [associations]
symbol:arid1aa "AT rich interactive domain 1Aa
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 ZFIN:ZDB-GENE-080220-35 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:BX649265
EMBL:CR524825 IPI:IPI00934197 Ensembl:ENSDART00000135930
ArrayExpress:F1QMS8 Bgee:F1QMS8 Uniprot:F1QMS8
Length = 2286
Score = 153 (58.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 89/342 (26%), Positives = 114/342 (33%)
Query: 429 YGNYPPQQMAPRSNYGGPPNMXXXXXXXXXXXXXXXHVSDRPVSVSH-STSIPGHXXXXX 487
Y NYPP + GP +M S P +S ST P
Sbjct: 243 YPNYPPSDYNSQDGAKGPADMASSGGQYGGGHPGWQQRSHHPPPMSPGSTGQPLGRNQTP 302
Query: 488 XXXXXXXXXXXXNYNYGQPHTSEYXXXXXXXXXXXXXXXGHGYDDNHAPVQHPYGGHSNS 547
Y G P++ + G GY P ++P G
Sbjct: 303 GSMDQMGKMRSQPYGSGGPYSQQPHQGTPSGPQQGPAYPGQGYGPP-GPQRYPMGMQGRM 361
Query: 548 Q-----PVYSQ---GG-LQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQS 598
Q P Y Q GG +Q G Q YG+ G P G Q Y Y
Sbjct: 362 QYGQQMPSYGQQGPGGYMQQG-QQSYYGQHGPG-PHPGQQQSPYPQPSPGQAGGQGPYSQ 419
Query: 599 QVPSAQSYGPN----VPHQQQYPYATSGPT-QQTYPSYGSAPAPDSYNQPPASAPGYPQQ 653
Q + QS GP+ P+QQ P+ + P Q T PS G + +P Y+Q A+A Q
Sbjct: 420 QPHATQSSGPHGQTGTPYQQ--PHMSQQPQGQMTGPSPGPSQSP--YSQSSAAAAAAAPQ 475
Query: 654 AGQA------VP-NYP-QPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQ 705
+ Q+ VP + P Q G QAP Q P+ GQ QQ QP+ S Q
Sbjct: 476 SSQSPYSQQQVPQSQPSQQGSSQAPPASQTQPSYPPGQGPQQQQ----QPSASQ-----Q 526
Query: 706 GTQDXXXXXXXXXXXXXXXTGQP-GYAQPAATQPSYDQSASQ 746
Q GQP Y+Q Q Q Q
Sbjct: 527 PPQTPTPASQTPAGHAQMPQGQPTSYSQNPPQQQQQQQQPQQ 568
Score = 143 (55.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 74/237 (31%), Positives = 84/237 (35%)
Query: 554 GGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQ 613
GG G+ Q + PP P QP Q +Q YG P+
Sbjct: 271 GGGHPGWQQRSHHPPPMS-PGSTGQPLGRNQTPGSMD------QMGKMRSQPYGSGGPYS 323
Query: 614 QQYPYAT-SGPTQ-QTYPSYG-SAPAPDSYNQPPASAPGYPQQAGQAVPNYPQ--PGG-- 666
QQ T SGP Q YP G P P Y P G Q GQ +P+Y Q PGG
Sbjct: 324 QQPHQGTPSGPQQGPAYPGQGYGPPGPQRY---PMGMQGR-MQYGQQMPSYGQQGPGGYM 379
Query: 667 QQAPS--YGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXX 724
QQ YGQ P GQ Q YP QP+ AG G QG
Sbjct: 380 QQGQQSYYGQHGPGPHPGQQ---QSPYP-QPSPGQAG-G-QGPYSQQPHATQSSGPHGQ- 432
Query: 725 TGQPGYAQPAATQPSYDQSASQSTAYG---VAQGTAAAGYGKTVSPQPGYPQYDSTQ 778
TG P Y QP +Q Q S +Q +AAA S Q Y Q Q
Sbjct: 433 TGTP-YQQPHMSQQPQGQMTGPSPGPSQSPYSQSSAAAAAAAPQSSQSPYSQQQVPQ 488
Score = 133 (51.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 54/183 (29%), Positives = 67/183 (36%)
Query: 535 APVQHPYGGHSNSQPVYSQG--GLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+P P G + Q YSQ QS Q G P Y P QPQ
Sbjct: 401 SPYPQPSPGQAGGQGPYSQQPHATQSSGPHGQTGTP-YQQPHMSQQPQGQMTGPSPGPSQ 459
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSY-GSAPAPDSYNQPPASAPGY- 650
QS +A + P Q PY+ Q+ PS GS+ AP + P+ PG
Sbjct: 460 SPYSQSSAAAAAA----APQSSQSPYSQQ-QVPQSQPSQQGSSQAPPASQTQPSYPPGQG 514
Query: 651 PQQ-----AGQAVPNYPQPGGQQAPSYGQVA---PTAGYGQYTNTQQAYPEQPATSNAGY 702
PQQ A Q P P P Q + Q+ PT+ Y Q QQ +QP
Sbjct: 515 PQQQQQPSASQQPPQTPTPASQTPAGHAQMPQGQPTS-YSQNPPQQQQQQQQPQQQQQQS 573
Query: 703 GYQ 705
YQ
Sbjct: 574 PYQ 576
Score = 61 (26.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 26/71 (36%), Positives = 34/71 (47%)
Query: 377 SGG-FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQ 435
SGG ++QQ ++ P+GP Q GP ++P Q PQR P Q + YG Q
Sbjct: 318 SGGPYSQQPHQG-TPSGPQQ-GP--AYPGQGYGPPGPQRYPMGMQG----RMQYG----Q 365
Query: 436 QMAPRSNYGGP 446
QM P GP
Sbjct: 366 QM-PSYGQQGP 375
Score = 60 (26.2 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 26/80 (32%), Positives = 29/80 (36%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHP--SQPMAYDYPQRG-PY-PSQNPHYPHLP 428
P G Q R + P Q G S P S P +G P P Q P YP
Sbjct: 285 PPMSPGSTGQPLGRNQTPGSMDQMGKMRSQPYGSGGPYSQQPHQGTPSGPQQGPAYPGQG 344
Query: 429 YGNYPPQQ----MAPRSNYG 444
YG PQ+ M R YG
Sbjct: 345 YGPPGPQRYPMGMQGRMQYG 364
Score = 37 (18.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 755 GTAAAGYGKTVSPQPG 770
G +GYG +++ PG
Sbjct: 897 GMMGSGYGPSMNNMPG 912
>MGI|MGI:1890357 [details] [associations]
symbol:Igf2bp1 "insulin-like growth factor 2 mRNA binding
protein 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006403 "RNA localization"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010610
"regulation of mRNA stability involved in response to stress"
evidence=ISO] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0045182 "translation
regulator activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR binding"
evidence=ISO] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR000504 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076
PROSITE:PS50084 PROSITE:PS50102 SMART:SM00322 SMART:SM00360
EMBL:AF061569 MGI:MGI:1890357 GO:GO:0005886 GO:GO:0005634
GO:GO:0017148 GO:GO:0000166 GO:GO:0030425 Gene3D:3.30.70.330
GO:GO:0045182 GO:GO:0048027 GO:GO:0003730 EMBL:AL603682
GO:GO:0010494 GO:GO:0070937 GO:GO:0070934 HSSP:Q9Y6M1
HOVERGEN:HBG052725 CTD:10642 eggNOG:NOG249985
GeneTree:ENSGT00530000063171 HOGENOM:HOG000000675 OMA:EQETVHV
OrthoDB:EOG405S0T GO:GO:0010610 GO:GO:0006403 EMBL:AK044850
EMBL:AK013940 EMBL:AL606704 EMBL:BC051679 IPI:IPI00131056
RefSeq:NP_034081.1 UniGene:Mm.294769 UniGene:Mm.490105
ProteinModelPortal:O88477 SMR:O88477 DIP:DIP-48578N STRING:O88477
PhosphoSite:O88477 PaxDb:O88477 PRIDE:O88477
Ensembl:ENSMUST00000013559 GeneID:140486 KEGG:mmu:140486
UCSC:uc007lay.2 InParanoid:O88477 NextBio:369796 Bgee:O88477
Genevestigator:O88477 Uniprot:O88477
Length = 577
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/185 (28%), Positives = 83/185 (44%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P VG +IGK G I+ L + A I+I P + R V I G KA
Sbjct: 409 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA--PPETPDSKVRMVVITGPPEAQFKA 466
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I + E + G V L T I+VP G +IG+GG+T+ LQ
Sbjct: 467 QGRIYGKLKEENFFGPKEEVK--LET----------HIRVPASAAGRVIGKGGKTVNELQ 514
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFN- 381
+ A + + P D + + IV++ G ++AQ I+++L+Q V+ G N
Sbjct: 515 NLTAAEVVVPRDQTP--DENDQVIVKIIGHFYASQMAQRKIRDILAQ-VKQQHQKGQSNL 571
Query: 382 QQAYR 386
QA R
Sbjct: 572 AQARR 576
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E V++ +P + VG IIG+ G+ IK L + A I++ P PE SK R+V +TG
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP---PETPDSKVRMVVITG 458
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI NN VG LIGK G ++ ++ ++ KI I+ D + R + + G + N +A
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRA 339
Query: 263 EKLINAVIAEA 273
E+ I + EA
Sbjct: 340 EQEIMKKVREA 350
>UNIPROTKB|Q5T6W5 [details] [associations]
symbol:HNRNPK "Heterogeneous nuclear ribonucleoprotein K"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
GO:GO:0030529 EMBL:AL354733 HOGENOM:HOG000019764 HOVERGEN:HBG051916
InterPro:IPR012987 Pfam:PF08067 UniGene:Hs.522257 HGNC:HGNC:5044
ChiTaRS:HNRNPK IPI:IPI00514561 SMR:Q5T6W5 MINT:MINT-1445469
Ensembl:ENST00000435158 Uniprot:Q5T6W5
Length = 428
Score = 119 (46.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
++ +P + G IIG+GG+ IK ++ SGA I+ I + L +GS++RI+ +TG QI+
Sbjct: 356 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIK-IDEPL---EGSEDRIITITGTQDQIQN 411
Query: 359 AQEMIKEVLSQ 369
AQ +++ + Q
Sbjct: 412 AQYLLQNSVKQ 422
Score = 60 (26.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ + + G +IG G I+ L+ N+ I++ ++ PH+ R V I G + +
Sbjct: 113 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECC--PHSTDRVVLIGGKPDRVVEC 170
Query: 263 EKLINAVIAEADAGG 277
K+I +I+E+ G
Sbjct: 171 IKIILDLISESPIKG 185
>ASPGD|ASPL0000041263 [details] [associations]
symbol:AN9132 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR017956 Pfam:PF02178 SMART:SM00384
GO:GO:0003677 EMBL:BN001306 InterPro:IPR020478 PRINTS:PR00929
eggNOG:NOG12793 EMBL:AACD01000169 RefSeq:XP_682401.1
ProteinModelPortal:Q5ARE8 EnsemblFungi:CADANIAT00009478
GeneID:2867965 KEGG:ani:AN9132.2 OMA:QNSGPQN Uniprot:Q5ARE8
Length = 1563
Score = 141 (54.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 74/256 (28%), Positives = 91/256 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
+H+ Q Y + S P +Q Q QY +P P Q QPQ Y
Sbjct: 198 SHSQNQQ-YTQYQQSSPYQTQSA-QYQQPVSQYQQPQKTQPTQYQQPQQYRQPQQAQYTP 255
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQ 652
+P Q Y P P QQ PY QQ S A P S Q PQ
Sbjct: 256 QTQSSPYLPQTQ-Y-PQYPSSQQPPYQQLQNYQQQQKS---AQVPQSSQQSYPQQTQIPQ 310
Query: 653 QAGQAVPNYPQPGGQQAPSYGQVAPTA-GYGQY-TNTQQA--YPEQPATSNAGYGYQGTQ 708
+ Q NY Q Q+AP Q +P GY Q T+ QQA +Q A QG Q
Sbjct: 311 TSQQ---NYQQASAQRAP---QTSPVQQGYQQNSTSAQQAPQLSQQSYAPQAQKSAQGPQ 364
Query: 709 DXXXXXXXXXXXXX-XXTGQPGY---AQPAATQ-PSYDQSASQSTAYGVAQGTAAAGYGK 763
GQ Y AQ +A Q P Q + ++ V Q + GY +
Sbjct: 365 ASPVKQSYQQPGQKPSHAGQQSYQHTAQSSAQQLPQSSQQSFLLSSAQVPQSSQQKGYQQ 424
Query: 764 TV------SPQPGYPQ 773
S QP YPQ
Sbjct: 425 ASTQQVPQSSQPSYPQ 440
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 57/189 (30%), Positives = 73/189 (38%)
Query: 596 YQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAG 655
YQ+Q SAQ P +QQ P T PTQ P P Y S+P PQ
Sbjct: 214 YQTQ--SAQYQQPVSQYQQ--PQKTQ-PTQYQQPQQYRQPQQAQYTPQTQSSPYLPQTQY 268
Query: 656 QAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQ---PATSNAGYGYQGTQDXXX 712
P+ QP QQ +Y Q +A Q ++QQ+YP+Q P TS Y Q
Sbjct: 269 PQYPSSQQPPYQQLQNYQQQQKSAQVPQ--SSQQSYPQQTQIPQTSQQNYQQASAQRAPQ 326
Query: 713 XXXXXXXXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGY- 771
T P +Q SY A +S AQG A+ ++ QPG
Sbjct: 327 TSPVQQGYQQNSTS--AQQAPQLSQQSYAPQAQKS-----AQGPQASPVKQSYQ-QPGQK 378
Query: 772 PQYDSTQMY 780
P + Q Y
Sbjct: 379 PSHAGQQSY 387
>MGI|MGI:1932491 [details] [associations]
symbol:Prp2 "proline rich protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:1932491 GO:GO:0005576 InterPro:IPR026086 PANTHER:PTHR23203
UniGene:Mm.425348 UniGene:Mm.484054 CleanEx:MM_PRH1 EMBL:M23236
EMBL:M12100 EMBL:M19419 IPI:IPI00474263 IPI:IPI00855123 PIR:A28996
PIR:D29149 UniGene:Mm.333439 Genevestigator:P05143
GermOnline:ENSMUSG00000058295 Uniprot:P05143
Length = 317
Score = 91 (37.1 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 26/67 (38%), Positives = 29/67 (43%)
Query: 386 RPRVPTGPPQ-WGPRGSHPSQPMAYDYPQR----GPYPSQNPHYPHLPYGNYPPQQMAPR 440
+PR P GPP GP+ P P PQ+ GP P P P P G PP PR
Sbjct: 115 QPRPPQGPPPPGGPQPRPPQGPPPPGGPQQRPPQGPPPPGGPQ-PRPPQGPPPPAGPQPR 173
Query: 441 SNYGGPP 447
G PP
Sbjct: 174 PPQGPPP 180
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 26/67 (38%), Positives = 29/67 (43%)
Query: 386 RPRVPTGPPQ-WGPRGSHPSQPMAYDYPQ----RGPYPSQNPHYPHLPYGNYPPQQMAPR 440
+PR P GPP GP+ P P PQ +GP P P P P G PP PR
Sbjct: 73 QPRPPQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPPGGPQ-PRPPQGPPPPGGPQPR 131
Query: 441 SNYGGPP 447
G PP
Sbjct: 132 PPQGPPP 138
Score = 85 (35.0 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 47/150 (31%), Positives = 56/150 (37%)
Query: 548 QPVYSQGGLQSGYHQHQYGKPPYGMPAQG-TQPQSYXXXXXXXXXXXXXYQSQVPSAQSY 606
QP QG G Q +PP G P G QP+ Q P A
Sbjct: 129 QPRPPQGPPPPGGPQQ---RPPQGPPPPGGPQPRPPQGPPPPAGPQPRPPQGPPPPA--- 182
Query: 607 GPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQP-PASAPGYPQQAGQAVPNYPQPG 665
GP++ Q P T GP QQ YP +P P QP P P P G P +P+P
Sbjct: 183 GPHL-RPTQGPPPTGGP-QQRYPQ---SPPPPGGPQPRPPQGP--PPPGG---P-HPRPT 231
Query: 666 GQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
P+ Q PT G QQ P+ P
Sbjct: 232 QGPPPTGPQPRPTQGPPPTGGPQQRPPQGP 261
Score = 84 (34.6 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 27/69 (39%), Positives = 30/69 (43%)
Query: 386 RPRVPTGPPQWGPRGSH--PSQ-PMAYDYPQR----GPYPSQNPHYPHLPYGNYPPQQMA 438
+PR P GPP P G H P+Q P PQ+ P P P P P G PP
Sbjct: 171 QPRPPQGPPP--PAGPHLRPTQGPPPTGGPQQRYPQSPPPPGGPQ-PRPPQGPPPPGGPH 227
Query: 439 PRSNYGGPP 447
PR G PP
Sbjct: 228 PRPTQGPPP 236
Score = 82 (33.9 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 26/68 (38%), Positives = 28/68 (41%)
Query: 386 RPRVPTGPPQ-WGPRGSHPSQPMAYDYPQRGPYPSQNPHYP-----HLPYGNYPPQQMAP 439
+PR P GPP GP+ P P PQ P P Q P P P G PP P
Sbjct: 101 QPRPPQGPPPPGGPQPRPPQGPPPPGGPQ--PRPPQGPPPPGGPQQRPPQGPPPPGGPQP 158
Query: 440 RSNYGGPP 447
R G PP
Sbjct: 159 RPPQGPPP 166
Score = 80 (33.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 23/62 (37%), Positives = 25/62 (40%)
Query: 386 RPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG 445
+PR P Q GP QP P +GP P P P P G PP PR G
Sbjct: 40 QPRPPVNGSQQGPPPPGGPQPR----PPQGPPPPGGPQ-PRPPQGPPPPGGPQPRPPQGP 94
Query: 446 PP 447
PP
Sbjct: 95 PP 96
Score = 79 (32.9 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 22/60 (36%), Positives = 27/60 (45%)
Query: 388 RVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
++P P P GS P P+ + Q+GP P P P P G PP PR G PP
Sbjct: 28 QIPNQRPP--PSGSQPRPPV--NGSQQGPPPPGGPQ-PRPPQGPPPPGGPQPRPPQGPPP 82
Score = 76 (31.8 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 34/98 (34%), Positives = 39/98 (39%)
Query: 607 GPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAP--GYPQQA---GQAVPNY 661
GP+ P Q P T GP Q P+ G P +PP P G PQ G P
Sbjct: 225 GPH-PRPTQGPPPT-GP--QPRPTQGPPPTGGPQQRPPQGPPPPGGPQPRPPQGPPPPTG 280
Query: 662 PQPGGQQAP--SYG--QVAPTAGYGQYTNTQQAYPEQP 695
PQP Q P + G Q P AG Q Q P+ P
Sbjct: 281 PQPRPTQGPHPTGGPQQTPPLAGNPQ--GPPQGRPQGP 316
Score = 71 (30.1 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 31/90 (34%), Positives = 36/90 (40%)
Query: 607 GPNVPHQQQYPYATSGPTQQTYPSYG---SAPAPDSYNQPPASAPGYPQQAGQAVPNYPQ 663
GP P Q P GP + P+ G + P P PP + G PQQ P P
Sbjct: 211 GPQ-PRPPQGPPPPGGPHPR--PTQGPPPTGPQPRPTQGPPPT--GGPQQRPPQGP--PP 263
Query: 664 PGGQQA-PSYGQVAPTAGYGQYTNTQQAYP 692
PGG Q P G PT Q TQ +P
Sbjct: 264 PGGPQPRPPQGPPPPTGP--QPRPTQGPHP 291
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 286 LATAQASGAAEQVE--IKVPNEK 306
LA + A G E+++ I++PN++
Sbjct: 11 LALSSAQGPREELQNQIQIPNQR 33
>WB|WBGene00001215 [details] [associations]
symbol:ego-2 species:6239 "Caenorhabditis elegans"
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IGI] InterPro:IPR025304 Pfam:PF13949 GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0002119 GO:GO:0045747
GO:GO:0040035 Gene3D:1.25.40.280 InterPro:IPR004328 Pfam:PF03097
SMART:SM01041 PROSITE:PS51180 GO:GO:0040002 EMBL:AL117201
UniGene:Cel.16377 GeneID:190251 KEGG:cel:CELE_Y53H1C.2 CTD:190251
RefSeq:NP_001251634.1 ProteinModelPortal:H8ESG1 WormBase:Y53H1C.2c
Uniprot:H8ESG1
Length = 1494
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 70/269 (26%), Positives = 88/269 (32%)
Query: 529 GYDDNHAPVQHPYGGHSNSQPVYS-QGGLQS--GYHQHQYGKPPYGMPAQGTQPQSYXXX 585
G H Q G +Q Q G Q G H G AQG Q +
Sbjct: 982 GAQGAHFGAQGAQGAQFGAQGAQGEQFGAQGAQGAHFGAQGAQGAHFGAQGAQGTQFGAQ 1041
Query: 586 XXXXXXXXXXYQSQVPSAQSYGPNVPHQQQY-------PYA---TSGPTQQTYPSYG-SA 634
Y + P SYGP P Y P A GP + ++G SA
Sbjct: 1042 GAQGPPPAS-YGAPTPPQASYGP-APGAHGYQNGAQGPPGAEVGAQGPPGAHFGAHGASA 1099
Query: 635 PAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVA-PTAGYGQYTNTQQAYPE 693
P P SY P P PQ + A P P G Q ++G A P +G T Q +
Sbjct: 1100 PPPTSYGAPTPQRP--PQASYGAAPGAQGPPGGQFEAHGAAALPPTSHGAPT-PQGPFGA 1156
Query: 694 QPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSAS----QSTA 749
P G G Q G PG P Q S+ Q++A
Sbjct: 1157 APGAQFGAQGPYGQQGARYEAQKSPGAAIF--GAPG--APPQHQGSFGAQFGVPPPQNSA 1212
Query: 750 YGVAQGTA--AAGYGKTVSPQPGYPQYDS 776
G G A+ + T PQP +P Y +
Sbjct: 1213 PGAQFGAKPEASSHAPTPPPQP-HPSYQA 1240
Score = 76 (31.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 21/61 (34%), Positives = 24/61 (39%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGP 446
P TG GP G+ P P Y P + P P PYG Y P + S Y P
Sbjct: 862 PGALTGSQASGPFGAPPGAPHGYGAPLQAP--------PQAPYG-YDPSRYQDPSTYPAP 912
Query: 447 P 447
P
Sbjct: 913 P 913
Score = 61 (26.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 28/90 (31%), Positives = 36/90 (40%)
Query: 373 PSTLSGGFNQQAYRP-RVPTGPPQ-WG-PRGSHPSQPMAYD---YPQRGPYPSQNP---- 422
P L+G QA P P G P +G P + P P YD Y YP+ P
Sbjct: 862 PGALTGS---QASGPFGAPPGAPHGYGAPLQAPPQAPYGYDPSRYQDPSTYPAPPPILPG 918
Query: 423 --HYPHL--PY----GNYPPQQMAPRSNYG 444
Y H PY G+Y ++ P + YG
Sbjct: 919 SAAYEHAIRPYPGDTGSYQVPRIVPGAQYG 948
>RGD|1309751 [details] [associations]
symbol:Tfg "Trk-fused gene" species:10116 "Rattus norvegicus"
[GO:0004871 "signal transducer activity" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0042802
"identical protein binding" evidence=IEA;ISO] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
InterPro:IPR000270 Pfam:PF00564 SMART:SM00666 RGD:1309751
GO:GO:0043123 GO:GO:0004871 EMBL:CH473967 CTD:10342
HOGENOM:HOG000132915 HOVERGEN:HBG009087 KO:K09292 OMA:YTTQTSQ
OrthoDB:EOG40K80D GeneTree:ENSGT00510000047809 EMBL:BC078947
IPI:IPI00464776 RefSeq:NP_001012144.1 RefSeq:XP_003751088.1
UniGene:Rn.24822 STRING:Q6AYR1 Ensembl:ENSRNOT00000048417
GeneID:360709 KEGG:rno:360709 UCSC:RGD:1309751 InParanoid:Q6AYR1
NextBio:673825 Genevestigator:Q6AYR1 Uniprot:Q6AYR1
Length = 398
Score = 129 (50.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 52/182 (28%), Positives = 69/182 (37%)
Query: 536 PVQHPYGGHSNSQ-----PVYSQGGLQSGYHQHQYGKPP--YGMP-----AQGTQPQSYX 583
P Q PY G +Y Q Q+GY Q PP YG+ +Q T PQ
Sbjct: 225 PQQPPYAGAQTQAGQIEGQMYQQYQQQAGYSAQQPQAPPQQYGIQYSASYSQQTGPQQPQ 284
Query: 584 XXXXXXXXXXXXYQSQVPSAQSYGPNVPHQ--QQYPYATSGPTQQTYPSYGSAPAPDSYN 641
Q+ P+ +P Q QQY +T P QTY + S PA +Y
Sbjct: 285 QFQGYGQQPTS--QAPAPAFSGQPQQLPAQPPQQYQASTYPP--QTYTTQTSQPA--NYT 338
Query: 642 QPPASAPGY-PQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNA 700
PP S PG P Q G P+PG +P+ P+ G Y + + +
Sbjct: 339 VPPGSQPGMAPSQPGAY---QPRPGFTPSPASTMAPPSTGANPYARNRPPFGQGYTQPGP 395
Query: 701 GY 702
GY
Sbjct: 396 GY 397
Score = 47 (21.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 39 DEAKNSDEVEKNVDGFAEAHGSEVKRPRL--DDDKTEKPD 76
D KN DE+ KNV +V P +D++ PD
Sbjct: 170 DPLKNQDEINKNVMSAFGLTDDQVSGPPSAPTEDRSGTPD 209
>CGD|CAL0001510 [details] [associations]
symbol:PBP2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0010834 "telomere maintenance via
telomere shortening" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 CGD:CAL0001510 GO:GO:0003723
EMBL:AACQ01000046 EMBL:AACQ01000047 eggNOG:NOG315872
RefSeq:XP_718039.1 RefSeq:XP_718106.1 ProteinModelPortal:Q5A8H8
STRING:Q5A8H8 GeneID:3640267 GeneID:3640340 KEGG:cal:CaO19.13193
KEGG:cal:CaO19.5771 HOGENOM:HOG000247928 Uniprot:Q5A8H8
Length = 529
Score = 142 (55.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 58/244 (23%), Positives = 105/244 (43%)
Query: 207 PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI 266
P + ++G+ G+TI +L+ + +I ++ + P R V + G N+ +A LI
Sbjct: 167 PVKEASTIVGRKGETINHLREKANVRITVSENLKGVPE---RIVAVKGPAENVARAFGLI 223
Query: 267 NAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSG 326
VI E + P A + +++ +P+ +G IIG+ G + ++ S
Sbjct: 224 TRVILE-EPEDEP---------ASINSQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSA 273
Query: 327 ARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ--TVRPSTLSGGFNQQA 384
A+++ LP S +R++ V G I IA I +V+ + V +N
Sbjct: 274 AKLKAAENALPY---STDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHKVVLYNPAN 330
Query: 385 YRPRVPT-GPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNY 443
Y+P + G Q P + + PM Y + P+ S+ P + PY Q A + +
Sbjct: 331 YQPTDQSLGGRQRQPPSNSYNNPMGYQ-AKLPPF-SKPPQHQQSPYNFSMMFQPAVQPQH 388
Query: 444 GGPP 447
G P
Sbjct: 389 FGSP 392
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 39 DEAKNSDEVEKNVDGFAEAHGSEVKRPRLDDDKTEKPD 76
D+ + +++ + G + S +KR LD ++ + D
Sbjct: 44 DDNEGNEQSANSHSGNDTINSSSIKRIALDSEQLDLQD 81
>UNIPROTKB|P02812 [details] [associations]
symbol:PRB2 "Basic salivary proline-rich protein 2"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] GO:GO:0005576 EMBL:AC078950
EMBL:BX484538 EMBL:S80905 EMBL:K03208 IPI:IPI00552432 PIR:B40750
PIR:E25372 UniGene:Hs.654486 STRING:P02812 DMDM:160409933
PaxDb:P02812 PRIDE:P02812 Ensembl:ENST00000389362 UCSC:uc010shk.1
GeneCards:GC12M011544 HGNC:HGNC:9338 MIM:168810 neXtProt:NX_P02812
ArrayExpress:P02812 Bgee:P02812 CleanEx:HS_PRB2
Genevestigator:P02812 GermOnline:ENSG00000173342 InterPro:IPR026086
PANTHER:PTHR23203 Uniprot:P02812
Length = 416
Score = 92 (37.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 46/166 (27%), Positives = 60/166 (36%)
Query: 540 PYGGHSNSQPV---YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXY 596
P GG+ P QG G ++ Q + P G P QG PQ
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKP-QGPPPQG-GNQPQGPPPPPGKP 263
Query: 597 QSQVPSA--QSYGPNVPHQQQYPYATSGP---TQQTYPSYGSAPAPDSYNQP--PASAPG 649
Q P +S GP P + Q P G + ++ P P P NQP P PG
Sbjct: 264 QGPPPQGGNKSQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPG 323
Query: 650 YPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
PQ N PQ G P Q P G G + + ++ P +P
Sbjct: 324 KPQGPPPQGGNKPQ--GPPPPGKPQGPPPQG-GSKSRSARSPPGKP 366
Score = 90 (36.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 49/159 (30%), Positives = 53/159 (33%)
Query: 540 PYGGHSNSQPV----YSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXX 595
P GG+ P QG G ++ Q G PP G P QG PQ
Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKSQ-GPPPPGKP-QGPPPQG-GSKSRSSRSPPGK 303
Query: 596 YQSQVPSA--QSYGPNVPH-QQQYPYATSGPTQQTYPSYGS--APAPD------SYNQPP 644
Q P Q GP P + Q P G Q P G P P S PP
Sbjct: 304 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPP 363
Query: 645 ASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ 683
G PQQ G P P G P Q AP AG Q
Sbjct: 364 GKPQGPPQQEGNNPQGPPPPAGGN-PQQPQ-APPAGQPQ 400
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 31/92 (33%), Positives = 39/92 (42%)
Query: 359 AQEMIKEVLSQTVRPSTLSGGFNQQAYRPR---VPTGPPQWGPRGSHPSQPMAYDYPQRG 415
AQ + ++V SQ PS ++G N Q P+ P GPP + P P + PQ
Sbjct: 16 AQNLNEDV-SQEESPSLIAG--NPQGAPPQGGNKPQGPPSPPGKPQGPP-PQGGNQPQGP 71
Query: 416 PYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
P P P P P G PQ P GPP
Sbjct: 72 PPPPGKPQGPP-PQGGNKPQGPPPPGKPQGPP 102
Score = 87 (35.7 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 41/151 (27%), Positives = 50/151 (33%)
Query: 545 SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQ 604
S S P QG G +Q Q PP G P QG PQ Q P +
Sbjct: 173 SRSPPGKPQGPPPQGGNQPQGPPPPPGKP-QGPPPQG-----------GNKPQGPPPPGK 220
Query: 605 SYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQP 664
GP + A S P + P P PP G P Q G P P
Sbjct: 221 PQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKSQGPPPP 280
Query: 665 GGQQAPSYGQVAPTAGYGQYTNTQQAYPEQP 695
G Q P P G G + + ++ P +P
Sbjct: 281 GKPQGP------PPQG-GSKSRSSRSPPGKP 304
Score = 79 (32.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/102 (30%), Positives = 42/102 (41%)
Query: 357 EIAQEMIKEVLSQTVRPSTLSGGFNQQA--YRPRVPTGPPQWG---PRGSHPSQPMAYDY 411
+++QE +++ + + GG Q P P GPP G P+G P
Sbjct: 22 DVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 81
Query: 412 PQRGPYPSQNPHYPHLPYGNYPPQ---QMAPRSNYG---GPP 447
P +G Q P P P G PPQ +PRS G GPP
Sbjct: 82 PPQGGNKPQGPPPPGKPQGP-PPQGDKSRSPRSPPGKPQGPP 122
Score = 74 (31.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 24/61 (39%), Positives = 25/61 (40%)
Query: 387 PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGP 446
PR P G PQ GP P P + PQ P P P P P G PQ P GP
Sbjct: 111 PRSPPGKPQ-GP----P--PQGGNQPQGPPPPPGKPQGPP-PQGGNKPQGPPPPGKPQGP 162
Query: 447 P 447
P
Sbjct: 163 P 163
Score = 71 (30.1 bits), Expect = 0.00088, Sum P(2) = 0.00087
Identities = 25/78 (32%), Positives = 27/78 (34%)
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDY---PQRGPYPSQNPHYPHLPY 429
P G Q P P GPP G + P P PQ G P P P P
Sbjct: 81 PPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 140
Query: 430 GNYPPQQMAPRSNYGGPP 447
G PP Q + GPP
Sbjct: 141 G--PPPQGGNKPQ--GPP 154
>CGD|CAL0000592 [details] [associations]
symbol:orf19.5627 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0043409 "negative regulation of MAPK cascade" evidence=IEA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0007004 "telomere maintenance via telomerase"
evidence=IEA] [GO:0048255 "mRNA stabilization" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 CGD:CAL0000592 GO:GO:0003723 EMBL:AACQ01000034
eggNOG:NOG315872 RefSeq:XP_719187.1 ProteinModelPortal:Q5ABS3
GeneID:3639231 KEGG:cal:CaO19.5627 Uniprot:Q5ABS3
Length = 368
Score = 97 (39.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 292 SGAAEQVE-IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVT 350
SG + + I PN+ VG +IG+ G I G++ SGA I I + + +G ER+ +T
Sbjct: 282 SGGNKTTDTISFPNDIVGALIGKRGSRIDGVRKVSGAMIA-ISEAI---EGENERVFTIT 337
Query: 351 GDMRQIEIAQEMI 363
G ++ A++MI
Sbjct: 338 GSSHAVDKAKQMI 350
Score = 80 (33.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +PN+++G LIG G I+ LQ N I + P + R VE+ GT+ ++ +
Sbjct: 166 RLLIPNSQMGTLIGSKGARIQQLQNNFN--ISMIASKSFLPGSNERLVELQGTVDDLYDS 223
Query: 263 EKLINAVIAE--ADAGGSPSLVARG 285
++I+ + E + G+ V RG
Sbjct: 224 LRIISRCLIEDFSSIVGTTYYVPRG 248
>FB|FBgn0052642 [details] [associations]
symbol:CG32642 species:7227 "Drosophila melanogaster"
[GO:0042600 "chorion" evidence=IC] [GO:0007304 "chorion-containing
eggshell formation" evidence=IEP] EMBL:AE014298 GO:GO:0007304
GO:GO:0042600 RefSeq:NP_727651.2 ProteinModelPortal:Q8IR75
PRIDE:Q8IR75 GeneID:318137 KEGG:dme:Dmel_CG32642 UCSC:CG32642-RC
FlyBase:FBgn0052642 eggNOG:NOG252112 InParanoid:Q8IR75
OrthoDB:EOG4QRFMR GenomeRNAi:318137 NextBio:844912
ArrayExpress:Q8IR75 Bgee:Q8IR75 Uniprot:Q8IR75
Length = 381
Score = 130 (50.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 56/207 (27%), Positives = 74/207 (35%)
Query: 565 YGKPPYG--MPAQGTQ--P-QSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYA 619
Y PYG PA G Q P Q+Y Y S YG + PY
Sbjct: 102 YPPRPYGPPAPAYGYQSKPVQNYAPVRYSSSSGQNSYAYAAASGP-YGAKAVAEAPGPYP 160
Query: 620 TSGPTQQ-TYPSYGSA--PAPDSYNQPPASAPGY--PQQAGQAVPNYPQPGGQQAPSYGQ 674
+ P+ +YP+ +A P P Y PP+S P Y P A AV +Y +APS G
Sbjct: 161 VASPSYSVSYPAAPAAYAPPPPKYPSPPSSYPVYAKPVPAYAAVYSYADT--TKAPSTGS 218
Query: 675 VAPTAGYGQY-TNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQP 733
+A G +N YP + AT+ A T A
Sbjct: 219 TTASATTGTTKSNRYPGYPTKYATTTAATTTAATTTAATTTAATTTAATTTAATTTAATT 278
Query: 734 -AATQPSYDQSASQSTAYGVAQGTAAA 759
AAT + +A+ +TA T A
Sbjct: 279 TAATTTAATTTAATTTAATTTAATTTA 305
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 422 PHYPHLPYGNYPPQQMAPRSNYGGPP 447
P YP PYG PP AP Y P
Sbjct: 100 PSYPPRPYG--PP---APAYGYQSKP 120
>ZFIN|ZDB-GENE-040426-1010 [details] [associations]
symbol:fus "fusion (involved in t(12;16) in
malignant liposarcoma)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR001876 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641
PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360
SMART:SM00547 ZFIN:ZDB-GENE-040426-1010 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00530000063105 KO:K13098 CTD:2521 EMBL:BX571714
IPI:IPI00785727 RefSeq:NP_957377.2 UniGene:Dr.114403
Ensembl:ENSDART00000055340 GeneID:394058 KEGG:dre:394058
NextBio:20815017 Bgee:F1R0M4 Uniprot:F1R0M4
Length = 541
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 60/232 (25%), Positives = 78/232 (33%)
Query: 543 GHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQVPS 602
G ++S GG QSG Y +P AQ QSY Y
Sbjct: 7 GQTSSHGYGGYGG-QSG---QSYSQPS----AQNYSQQSYGGYNQSSESSSAPYNQG--- 55
Query: 603 AQSYGPNVPHQQQYPYATSGPTQ---QTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVP 659
Y N Q Y + P+Q Q+ SY S ++ PPA + GY QQ+ +
Sbjct: 56 --GYSSNYGQSQSGGYGSQAPSQGYSQSSQSYSSGGYSNTSQPPPAQSGGYSQQSSYS-- 111
Query: 660 NYPQPGGQQAPS-YGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXX 718
Y Q AP Y + ++GYGQ + GYG G Q
Sbjct: 112 GYNQSSPASAPGGYSSSSQSSGYGQQQQQSGGGYGGSGGQSGGYGSSGGQSSGFGGSGGQ 171
Query: 719 XXXXXXTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPG 770
G P + P QS Q + YG QG GY + P G
Sbjct: 172 HQSSQSGGGSYSPSPNYSSPP-PQSYGQQSQYG--QG----GYNQDSPPMSG 216
Score = 129 (50.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 61/184 (33%), Positives = 77/184 (41%)
Query: 538 QHPYGGH-----SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXX 592
Q YGG+ S+S P Y+QGG S Y Q Q G YG A Q Y
Sbjct: 35 QQSYGGYNQSSESSSAP-YNQGGYSSNYGQSQSGG--YGSQAPS---QGYSQSSQSYSSG 88
Query: 593 XXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQ 652
SQ P AQS G + QQ Y SG Q + P A AP Y+ S+ GY Q
Sbjct: 89 GYSNTSQPPPAQSGG----YSQQSSY--SGYNQSS-P----ASAPGGYSSSSQSS-GYGQ 136
Query: 653 QAGQAVPNYPQPGGQQAPSYGQVA-PTAGYG----QYTNTQQ---AYPEQPATSNA---G 701
Q Q+ Y GGQ YG ++G+G Q+ ++Q +Y P S+
Sbjct: 137 QQQQSGGGYGGSGGQSG-GYGSSGGQSSGFGGSGGQHQSSQSGGGSYSPSPNYSSPPPQS 195
Query: 702 YGYQ 705
YG Q
Sbjct: 196 YGQQ 199
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 43/146 (29%), Positives = 65/146 (44%)
Query: 626 QTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYT 685
Q+ SY S P+ +Y+Q S GY Q + + Y Q GG + +YGQ + + GYG
Sbjct: 20 QSGQSY-SQPSAQNYSQQ--SYGGYNQSSESSSAPYNQ-GGYSS-NYGQ-SQSGGYGSQA 73
Query: 686 NTQQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQPAATQPSYDQSAS 745
+Q Y + + ++G GY T +G + PA+ Y S+S
Sbjct: 74 PSQ-GYSQSSQSYSSG-GYSNTSQPPPAQSGGYSQQSSYSGY-NQSSPASAPGGYS-SSS 129
Query: 746 QSTAYGVAQGTAAAGYGKTVSPQPGY 771
QS+ YG Q + GYG + GY
Sbjct: 130 QSSGYGQQQQQSGGGYGGSGGQSGGY 155
>UNIPROTKB|B9ZVT2 [details] [associations]
symbol:ANXA7 "Annexin A7" species:9606 "Homo sapiens"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005544
"calcium-dependent phospholipid binding" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006874 "cellular calcium ion homeostasis" evidence=IEA]
[GO:0007599 "hemostasis" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0009651 "response to salt stress" evidence=IEA]
[GO:0009992 "cellular water homeostasis" evidence=IEA] [GO:0031982
"vesicle" evidence=IEA] InterPro:IPR001464 GO:GO:0005829
GO:GO:0005886 GO:GO:0005635 GO:GO:0008360 GO:GO:0008283
GO:GO:0009651 GO:GO:0005509 GO:GO:0006874 GO:GO:0031982
GO:GO:0005544 PANTHER:PTHR10502 GO:GO:0009992 GO:GO:0007599
InterPro:IPR013286 PRINTS:PR01871 EMBL:AL512656 EMBL:AL353731
UniGene:Hs.631827 HGNC:HGNC:545 ChiTaRS:ANXA7 IPI:IPI00647899
ProteinModelPortal:B9ZVT2 STRING:B9ZVT2 Ensembl:ENST00000394847
ArrayExpress:B9ZVT2 Bgee:B9ZVT2 Uniprot:B9ZVT2
Length = 144
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/118 (35%), Positives = 50/118 (42%)
Query: 596 YQSQVPSAQSYGPNVPHQ-QQYPYATSGPTQQTYPSYGSAP-APDSYNQPPAS----APG 649
Y P+ P P Q+ + SG Q YPS G P +Y Q P+S A G
Sbjct: 3 YPGYPPTGYPPFPGYPPAGQESSFPPSG--QYPYPS-GFPPMGGGAYPQVPSSGYPGAGG 59
Query: 650 YPQQAGQAVPN-YP---QPGGQQAPSYGQVAPTAGYGQYTNTQ--QAYPEQPATSNAG 701
YP G P YP QPGG APSY V P G+G YP+ P+ S G
Sbjct: 60 YPAPGGYPAPGGYPGAPQPGG--APSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGG 115
>TAIR|locus:4515103232 [details] [associations]
symbol:WIH3 "AT3G49845" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 IPI:IPI01020235 RefSeq:NP_001118805.1
UniGene:At.35564 EnsemblPlants:AT3G49845.1 GeneID:6240705
KEGG:ath:AT3G49845 OMA:GYPANSA Uniprot:F4IZ80
Length = 124
Score = 109 (43.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/76 (39%), Positives = 31/76 (40%)
Query: 633 SAPAPDSYNQPPASAP-GYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQ-YTNTQQA 690
SAP P Y P GYP AG P YPQ G P G P GYGQ Y
Sbjct: 11 SAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAG---YPPAGYPPPQQGYGQGYPAQGYP 67
Query: 691 YPEQPATSNAGYGYQG 706
P+ P Y YQG
Sbjct: 68 PPQYPQGHPPQYPYQG 83
>RGD|1310500 [details] [associations]
symbol:Arid1a "AT rich interactive domain 1A (SWI-like)"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006325 "chromatin
organization" evidence=ISO] [GO:0006337 "nucleosome disassembly"
evidence=IEA;ISO] [GO:0006338 "chromatin remodeling"
evidence=IEA;ISO] [GO:0016514 "SWI/SNF complex" evidence=IEA;ISO]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA;ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA;ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0042921 "glucocorticoid
receptor signaling pathway" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0071564 "npBAF complex" evidence=IEA;ISO] [GO:0071565 "nBAF
complex" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
RGD:1310500 GO:GO:0042921 GO:GO:0045893 GO:GO:0030521 GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0016514 OrthoDB:EOG437RD2
GO:GO:0030520 GO:GO:0006337 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
IPI:IPI00768472 Ensembl:ENSRNOT00000009173 UCSC:RGD:1310500
Uniprot:D4A3E3
Length = 2291
Score = 149 (57.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 82/267 (30%), Positives = 94/267 (35%)
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGK--P-PYGMPAQGTQPQSYXXXXXXX 589
+HAP+ P QP+ QS Q GK P PYG GT P S
Sbjct: 354 HHAPMS-PGSSGGGGQPLARTP--QSSSPMDQMGKMRPQPYG----GTNPYSQQQGPPSG 406
Query: 590 XXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPG 649
Y Q P YG P Q+YP G Q S A Y Q SA
Sbjct: 407 PQQGHGYPGQ-P----YGSQTP--QRYPMTMQGRAQSAMGSLSYAQQIPPYGQQGPSA-- 457
Query: 650 YPQQAGQAVPNY----PQPGGQQAPSYGQVAPT-AGYGQYTNTQQAYPEQPA--TSNAGY 702
Y QQ GQ P Y P P QQ P Y Q P+ + Q + QQ +QP +S Y
Sbjct: 458 YGQQ-GQT-PYYNQQSPHPQQQQQPPYSQQPPSQTPHAQPSYQQQPQTQQPQLQSSQPPY 515
Query: 703 GYQGTQDXXXXXXXXXXXXXXXT-----GQPGYAQPAATQPSYDQSASQSTAYGVAQGTA 757
Q +Q T QP Y+QP A P Y Q Q A A
Sbjct: 516 SQQPSQPPHQQSQTPYPSQQSTTQQHPQSQPPYSQPQAQAP-YQQQQPQQPASSTLSQQA 574
Query: 758 AAGYGKTVSPQPGYPQYDSTQMYAAPR 784
A Y PQP PQ Y+ R
Sbjct: 575 A--Y-----PQP-QPQQSQQTAYSQQR 593
Score = 49 (22.3 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 397 GPRGSHP-SQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPP 447
G G P + P + P N +YP+ PPQ A S GG P
Sbjct: 185 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTP 236
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 57 AHGSEVKRPRLDDDKTEKPDG 77
++G+ RP L+++ TE P G
Sbjct: 101 SNGNAGPRPALNNNLTEPPGG 121
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 13/43 (30%), Positives = 14/43 (32%)
Query: 392 GPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP-HLPYGNYP 433
GP Q P+ YP R YP Y P G P
Sbjct: 194 GPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTP 236
>MGI|MGI:97773 [details] [associations]
symbol:Prh1 "proline rich protein HaeIII subfamily 1"
species:10090 "Mus musculus" [GO:0005576 "extracellular region"
evidence=IEA] MGI:MGI:97773 GO:GO:0005576 InterPro:IPR026086
PANTHER:PTHR23203 EMBL:M12099 EMBL:M11902 IPI:IPI00116540
PIR:A24264 PIR:C29149 UniGene:Mm.425348 UniGene:Mm.484054
PRIDE:P05142 CleanEx:MM_PRH1 Genevestigator:P05142
GermOnline:ENSMUSG00000059934 Uniprot:P05142
Length = 261
Score = 86 (35.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 54/166 (32%), Positives = 59/166 (35%)
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQ 599
P GG P QG G Q +PP G P G PQ Q
Sbjct: 110 PPGGPQQRPP---QGPPPPGGPQP---RPPQGPPPPGG-PQLRPPQGPPPPAGPQPRPPQ 162
Query: 600 VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAP--GYPQQAGQA 657
P + GP P Q P T GP Q P+ G P +PP P G PQ
Sbjct: 163 GPPPPA-GPQ-PRPPQGPPPT-GP--QPRPTQGPPPTGGPQQRPPQGPPPPGGPQPRPPQ 217
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYT-----NTQ---QAYPEQP 695
P P PGG Q PS Q P G Q T NTQ Q P+ P
Sbjct: 218 GP--PPPGGPQ-PSPTQGPPPTGGPQQTPPLAGNTQGPPQGRPQGP 260
Score = 83 (34.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 23/63 (36%), Positives = 26/63 (41%)
Query: 385 YRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG 444
++PR P Q GP QP P +GP P P P P G PP PR G
Sbjct: 39 FQPRPPVNGSQQGPPPPGGPQPR----PPQGPPPPGGPQ-PRPPQGPPPPGGPQPRPPQG 93
Query: 445 GPP 447
PP
Sbjct: 94 PPP 96
Score = 39 (18.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 286 LATAQASGAAEQVEIKVPNEK 306
L++AQ Q +I++PN++
Sbjct: 13 LSSAQGPREENQNQIQIPNQR 33
>UNIPROTKB|E9PKN8 [details] [associations]
symbol:TDRKH "Tudor and KH domain-containing protein"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005739 GO:GO:0003723 EMBL:AL589765 HGNC:HGNC:11713
IPI:IPI00981760 ProteinModelPortal:E9PKN8 SMR:E9PKN8
Ensembl:ENST00000526378 ArrayExpress:E9PKN8 Bgee:E9PKN8
Uniprot:E9PKN8
Length = 131
Score = 108 (43.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
++E++VP E V LIIGR G IK L+ ++GARI + + + GD ER++ ++G Q+
Sbjct: 54 EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDV--GD---ERVLLISGFPVQV 108
Query: 357 EIAQEMIKEVLSQ 369
A+ I ++L++
Sbjct: 109 CKAKAAIHQILTE 121
>DICTYBASE|DDB_G0281955 [details] [associations]
symbol:agnD "argonaut-like protein" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016246 "RNA interference" evidence=ISS]
[GO:0003727 "single-stranded RNA binding" evidence=ISS]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 dictyBase:DDB_G0281955 GO:GO:0016246
GenomeReviews:CM000152_GR GO:GO:0003727 SUPFAM:SSF53098
SUPFAM:SSF101690 eggNOG:NOG286051 EMBL:AAFI02000044 KO:K02156
RefSeq:XP_001134555.1 ProteinModelPortal:Q1ZXG9
EnsemblProtists:DDB0233052 GeneID:8623325 KEGG:ddi:DDB_G0281955
InParanoid:Q1ZXG9 ProtClustDB:CLSZ2431313 Uniprot:Q1ZXG9
Length = 1295
Score = 111 (44.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 51/167 (30%), Positives = 56/167 (33%)
Query: 536 PVQHPYGGH--SNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXX 593
P Q GG+ Y Q GY+ YG PYG P G P
Sbjct: 154 PQQQQQGGYYPPPQHGYYPPPPPQGGYYPPPYGYDPYGPPQGGYYPPP--------PPYG 205
Query: 594 XXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ---PPASAPGY 650
Y P Y P P QQQ P P Q SYG P +S Q PP P
Sbjct: 206 YGYYPPPPPYGYYPP--PSQQQTPQQP--PQPQQLDSYG-VPLQNSQQQIPYPPQQQPPQ 260
Query: 651 PQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAY--PEQP 695
+Q Q P PQ QQ P Q P QQ P+QP
Sbjct: 261 YEQQPQQPPQQPQQP-QQQPQQPQQQPQLPQQPQQPQQQPLQQPQQP 306
Score = 101 (40.6 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 50/176 (28%), Positives = 55/176 (31%)
Query: 528 HGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGM--PAQGTQPQSYXXX 585
+GYD P P GG+ P Y G + Y PP P Q QPQ
Sbjct: 185 YGYD----PYGPPQGGYYPPPPPYGYGYYPPP-PPYGYYPPPSQQQTPQQPPQPQQLDSY 239
Query: 586 XXXXXXXXXXYQSQVP-SAQSYGPNVPHQ-QQYPYATSGPTQQTYPSYGSAPAPDSYNQP 643
Q Q+P Q P Q QQ P P QQ P QP
Sbjct: 240 GVPLQNS----QQQIPYPPQQQPPQYEQQPQQPPQQPQQPQQQPQQPQQQPQLPQQPQQP 295
Query: 644 ---PASAPGYPQQAGQAVPNYPQPGGQQAPSYG-QVAPTAGYGQYTNTQQAYPEQP 695
P P PQQ PQ QQ P Q P Q QQ +QP
Sbjct: 296 QQQPLQQPQQPQQQPLQPQQQPQQQPQQQPQQQLQQQPPPLQQQQQQQQQQQQQQP 351
Score = 86 (35.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 27/72 (37%), Positives = 30/72 (41%)
Query: 382 QQAYRPRVPT-GPPQWGPRGSHPSQPMAYDYPQRG--PYPSQNP---HYPHLPYGNYPPQ 435
Q Y P PT G Q G P Q Y YPQ P P Q +YP +G YPP
Sbjct: 116 QGGYYPPPPTSGSTQTGSTPPQPHQQGGY-YPQSASPPLPQQQQQGGYYPPPQHGYYPPP 174
Query: 436 QMAPRSNYGGPP 447
P+ Y PP
Sbjct: 175 P--PQGGYYPPP 184
Score = 76 (31.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 22/57 (38%), Positives = 26/57 (45%)
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQ 436
+ Q Y P P+GP Q G + P QP Y Q G YP P G+ PPQQ
Sbjct: 17 YQQGGYYPPPPSGPTQTG--STPPQQP---PYQQGGYYPPPPTSGP-TQTGSTPPQQ 67
Score = 74 (31.1 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 24/67 (35%), Positives = 30/67 (44%)
Query: 382 QQAYRPRVPTGP-PQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPR 440
Q Y P+ + P PQ +G + P YP P P Q +YP PYG Y P P+
Sbjct: 141 QGGYYPQSASPPLPQQQQQGGYYPPPQHGYYP---PPPPQGGYYPP-PYG-YDPYG-PPQ 194
Query: 441 SNYGGPP 447
Y PP
Sbjct: 195 GGYYPPP 201
Score = 64 (27.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 23/57 (40%), Positives = 24/57 (42%)
Query: 393 PPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG--PP 447
PP P P QP Y Q G YP P P G+ PPQQ P GG PP
Sbjct: 1 PPY--PYQQPPQQPQQPPYQQGGYYPPP-PSGP-TQTGSTPPQQ--PPYQQGGYYPP 51
Score = 64 (27.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 21/72 (29%), Positives = 28/72 (38%)
Query: 380 FNQQAYRPRVPT-GPPQWGPRG-SHPSQPMAYDYPQRGPYPSQNPHYPHLPYGN-YPPQQ 436
+ Q Y P PT GP Q G P Q + Q+G Y P + G+ P QQ
Sbjct: 43 YQQGGYYPPPPTSGPTQTGSTPPQQPQQQLQQSPHQQGGYYPPPPPSGSIQAGSTQPQQQ 102
Query: 437 MAPRSNYGGPPN 448
+ PP+
Sbjct: 103 QQQQQQQSQPPH 114
>TAIR|locus:2076229 [details] [associations]
symbol:AT3G10300 species:3702 "Arabidopsis thaliana"
[GO:0005509 "calcium ion binding" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0010286 "heat acclimation"
evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0051645 "Golgi localization" evidence=RCA]
[GO:0051646 "mitochondrion localization" evidence=RCA] [GO:0060151
"peroxisome localization" evidence=RCA] InterPro:IPR002048
InterPro:IPR011992 Pfam:PF13202 PROSITE:PS50222 SMART:SM00054
Prosite:PS00018 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 KO:K13448
EMBL:AC009400 eggNOG:NOG249191 HOGENOM:HOG000231984 EMBL:AY062498
EMBL:BT015172 IPI:IPI00518158 IPI:IPI00527889 IPI:IPI00541190
IPI:IPI00657133 RefSeq:NP_001030668.1 RefSeq:NP_187641.2
RefSeq:NP_850997.1 RefSeq:NP_850998.1 UniGene:At.43629
UniGene:At.67038 HSSP:P12815 ProteinModelPortal:Q8W4L0 SMR:Q8W4L0
PaxDb:Q8W4L0 PRIDE:Q8W4L0 EnsemblPlants:AT3G10300.3 GeneID:820192
KEGG:ath:AT3G10300 TAIR:At3g10300 InParanoid:Q8W4L0 OMA:NNPPPYG
PhylomeDB:Q8W4L0 ProtClustDB:CLSN2917933 Genevestigator:Q8W4L0
Uniprot:Q8W4L0
Length = 335
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 44/160 (27%), Positives = 57/160 (35%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXX 586
G+GY N P Q PYG N+ P Y G PY +P G QP Y
Sbjct: 10 GYGYGGNPPPPQPPYGSTGNNPPPYGSSGSNPPPPYGSSASSPYAVP-YGAQPAPYGAPP 68
Query: 587 XXXXXXXXXYQS----QVPSAQSYGPNVPHQQQY-PYATSGPTQQTYPSYGSAPAPDSYN 641
+ + P SYG P Y + +SGP+ Y YG AP +
Sbjct: 69 SAPYASLPGDHNKPHKEKPHGASYGS--PSPGGYGAHPSSGPSD--YGGYGGAPQQSGHG 124
Query: 642 QPPASAPGYPQQAGQAVPNY--PQPGGQQAPSYGQVAPTA 679
G PQQ+G Y P P + + P+A
Sbjct: 125 ---GGYGGAPQQSGHG-GGYGAPPPQASYGSPFASLVPSA 160
>UNIPROTKB|P20072 [details] [associations]
symbol:ANXA7 "Annexin A7" species:9913 "Bos taurus"
[GO:0048306 "calcium-dependent protein binding" evidence=IEA]
[GO:0035176 "social behavior" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0009992 "cellular water homeostasis"
evidence=IEA] [GO:0009651 "response to salt stress" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005544 "calcium-dependent phospholipid binding"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001464 InterPro:IPR018252 InterPro:IPR018502
Pfam:PF00191 PRINTS:PR00196 PROSITE:PS00223 SMART:SM00335
GO:GO:0005829 GO:GO:0005886 GO:GO:0005635 GO:GO:0008360
GO:GO:0008283 GO:GO:0009651 GO:GO:0005509 GO:GO:0006874
GO:GO:0035176 GO:GO:0031982 eggNOG:NOG267770
GeneTree:ENSGT00700000104223 GO:GO:0005544 Gene3D:1.10.220.10
PANTHER:PTHR10502 SUPFAM:SSF47874 HOGENOM:HOG000158803
HOVERGEN:HBG061815 EMBL:BC116141 IPI:IPI00694787 PIR:A27695
RefSeq:NP_001069459.1 UniGene:Bt.36610 ProteinModelPortal:P20072
SMR:P20072 STRING:P20072 PRIDE:P20072 Ensembl:ENSBTAT00000050132
GeneID:533360 KEGG:bta:533360 CTD:310 InParanoid:P20072 OMA:QAPYPSQ
OrthoDB:EOG43R3MS NextBio:20876016 GO:GO:0009992 GO:GO:0007599
InterPro:IPR013286 PRINTS:PR01871 Uniprot:P20072
Length = 463
Score = 106 (42.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 34/90 (37%), Positives = 35/90 (38%)
Query: 628 YPSYGSAPAPDSY-NQP-PASAPGYP-------QQAGQAVPNYPQP-----GG--QQAPS 671
YP+ G PAP Y P P AP YP G P YPQP GG Q P
Sbjct: 60 YPAPGGYPAPGGYPGAPQPGGAPSYPGGQGFGAPPGGAGFPGYPQPPTQSYGGGPAQVPL 119
Query: 672 YGQVAPTAGYGQYTNTQQAYPEQPATSNAG 701
G A QY Q YP QPA G
Sbjct: 120 PGGFPGGAMPSQYPGGQSPYPSQPAPMTQG 149
Score = 70 (29.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 390 PTGPPQWGPRGSHPS-QPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG 445
PTG P + P G P+ Q ++ P + PYPS +P + G YPP AP S Y G
Sbjct: 8 PTGYPPF-P-GYPPTGQESSFPPPGQYPYPSG---FPPMGGGAYPP---APSSGYPG 56
>ASPGD|ASPL0000049229 [details] [associations]
symbol:AN1606 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005544 "calcium-dependent
phospholipid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001464
InterPro:IPR018252 InterPro:IPR018502 Pfam:PF00191 PRINTS:PR00196
PROSITE:PS00223 SMART:SM00335 EMBL:BN001307 GO:GO:0005509
eggNOG:NOG267770 GO:GO:0005544 Gene3D:1.10.220.10 PANTHER:PTHR10502
SUPFAM:SSF47874 HOGENOM:HOG000158803 EMBL:AACD01000026
InterPro:IPR009117 PRINTS:PR01813 RefSeq:XP_659210.1
ProteinModelPortal:Q5BCX4 EnsemblFungi:CADANIAT00008243
GeneID:2875537 KEGG:ani:AN1606.2 OMA:MAYVEPL OrthoDB:EOG4FR41C
Uniprot:Q5BCX4
Length = 501
Score = 136 (52.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 58/169 (34%), Positives = 65/169 (38%)
Query: 559 GYHQHQYGKPPYGMPAQGTQP-QSYXXXXXXXXXXXXXYQSQVPSAQSYGPN-----VPH 612
G+ Q+ PP G PA G P SY VP + GP P
Sbjct: 11 GHPQYTQPPPPQGYPAPGPYPPSSYPAPTGAHPAHPIPAPYGVPGGGNPGPPGSAGAYPS 70
Query: 613 QQ-QYPY-ATSGPTQQTYPSYGS-APAPDSYNQPPASAPGYPQQAGQAVPNY-----PQP 664
Q PY A+ GP Q YP++G A P Y QPP S PG GQA P Y P P
Sbjct: 71 PSPQPPYQASPGPYPQ-YPAHGHPAQPPAPYQQPP-SGPG---SYGQANPPYGSAPPPNP 125
Query: 665 GGQQAPSY------GQVAPTAGYGQYTNTQQAYPEQPATSNAG-YGYQG 706
G P + GQ P AGY Q YP P G YG G
Sbjct: 126 YGTPPPPHAAPYPPGQYPPAAGY-----PPQGYPPGPPPPGVGPYGAPG 169
Score = 127 (49.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 55/188 (29%), Positives = 67/188 (35%)
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXX 586
GHG+ P P G + S +G H PYG+P G
Sbjct: 9 GHGHPQYTQPPP-PQGYPAPGPYPPSSYPAPTGAHPAHPIPAPYGVPGGGNPGPPGSAGA 67
Query: 587 XXXXXXXXXYQSQ---VPSAQSYG----PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDS 639
YQ+ P ++G P P+QQ P + G Q P YGSAP P+
Sbjct: 68 YPSPSPQPPYQASPGPYPQYPAHGHPAQPPAPYQQ--PPSGPGSYGQANPPYGSAPPPNP 125
Query: 640 YNQPPA--SAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQ--- 694
Y PP +AP YP GQ YP G Y P G G Y YP
Sbjct: 126 YGTPPPPHAAP-YPP--GQ----YPPAAGYPPQGYPPGPPPPGVGPY-GAPGGYPPAAPV 177
Query: 695 PATSNAGY 702
PA + GY
Sbjct: 178 PAPPSLGY 185
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 417 YPSQNPHYPHLPYGNYPPQQMAP 439
YP N + H Y PP Q P
Sbjct: 3 YPPPNYGHGHPQYTQPPPPQGYP 25
>ZFIN|ZDB-GENE-000208-9 [details] [associations]
symbol:cmn "calymmin" species:7955 "Danio rerio"
[GO:0031012 "extracellular matrix" evidence=IDA]
ZFIN:ZDB-GENE-000208-9 GeneTree:ENSGT00690000102270 EMBL:CT954256
EMBL:CT030151 IPI:IPI00997292 Ensembl:ENSDART00000124453
ArrayExpress:E7F6W5 Bgee:E7F6W5 Uniprot:E7F6W5
Length = 1249
Score = 135 (52.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 71/260 (27%), Positives = 95/260 (36%)
Query: 527 GHGYDDNHAPVQH--PYGGHSNSQPVYSQGGLQSGY-HQHQYGKPPYGMPAQGTQPQSYX 583
G+G ++N A ++ YGG N +P ++G L GY + + G Y P+ G S
Sbjct: 42 GYGSNNNAANLKGYGVYGGAQN-KPA-NRGHLPHGYGNGNTNGNNGYKAPSYGGY--SNL 97
Query: 584 XXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ- 642
+ + + + G N QY T+G T+ P YG A A + Q
Sbjct: 98 LGTHPRKGAGLGFGAGPAATKGQGSNPGGSSQYMGNTNGGTKGPKPGYG-AQAGQTNGQI 156
Query: 643 -PPASAPGYPQQAGQAVPNYPQPGGQQAPSY---GQVAPTAGYGQYTNTQQAYPEQPATS 698
P GYP G A N P+ G Q Y G P GYG Y N A QP T
Sbjct: 157 AKPNGYGGYPN-GGAA--NQPKTGFSQYMGYPNGGTKGPKPGYGGYPNGGAAV--QPGTG 211
Query: 699 NAGY------GYQGTQDXXXXXXXXXXXXXXX-TGQPGYAQP-AATQPSYDQSASQSTAY 750
++ Y G +G G GY AA QP+ S
Sbjct: 212 SSQYKGFPSGGIKGPNPGFAANAGASNEKGVKPNGYGGYPNGGAANQPNGGSSHYMGYPN 271
Query: 751 GVAQGTAAAGYGKTVSPQPG 770
G +G GYG P G
Sbjct: 272 GGTKGPKP-GYGANAGPSAG 290
>UNIPROTKB|F1RRD6 [details] [associations]
symbol:PDCD6IP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR025304 Pfam:PF13949
GO:GO:0005829 Gene3D:1.25.40.280 InterPro:IPR004328 Pfam:PF03097
SMART:SM01041 PROSITE:PS51180 GeneTree:ENSGT00670000098017
OMA:MPPTKPQ EMBL:CU928095 Ensembl:ENSSSCT00000012304 Uniprot:F1RRD6
Length = 772
Score = 98 (39.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 33/106 (31%), Positives = 38/106 (35%)
Query: 573 PAQGTQPQSYXXXXXXXXXXXXXYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTY-P-S 630
PAQ P P Q+ GP P YP P Y P +
Sbjct: 670 PAQAPAPAPAPAGTGTTAPAPSQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYA 729
Query: 631 YG--SAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQ 674
YG + P P Y+Q P AP YP G P+YP P Q Y Q
Sbjct: 730 YGQYNMPYPPVYHQSPGQAP-YP---GPQQPSYPFPQPPQQSYYPQ 771
Score = 94 (38.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 39/115 (33%), Positives = 45/115 (39%)
Query: 601 PSAQSYGPNVPHQQQYPYATSGPTQQTYPSYG------SAPAPDSYNQPPASAPGYPQQA 654
P A+ P +P + P P Q P+ +APAP +Q P SAP PQ
Sbjct: 648 PPARPPPPVLPANRAPPATAPAPAQAPAPAPAPAGTGTTAPAP---SQTPGSAPP-PQAQ 703
Query: 655 GQAVPNYP-QPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQ 708
G P YP PG Q P P A YGQY YP S Y G Q
Sbjct: 704 GPPYPTYPGYPGYCQMPMPMGYNPYA-YGQYN---MPYPPVYHQSPGQAPYPGPQ 754
Score = 83 (34.3 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 33/126 (26%), Positives = 50/126 (39%)
Query: 316 ETIKGLQTRSGARIQLIPQHLPEG----DGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
E +K L T ++L+ +L EG + E +VR I A++ ++ L + +
Sbjct: 545 EVLKNLATAYDNFVELVA-NLKEGTKFYNELTEMLVRFQNKCSDIVFARKTERDELLKDL 603
Query: 372 RPSTLSGGFNQQAYRPRVPTGPPQWGPRGSH---PSQPMAYDYPQRGPYPSQNPHYPHLP 428
+ S ++ P +PT Q P G H P P P P P P P LP
Sbjct: 604 QQSIA-----REPSAPSIPTPAYQSSPAGGHTPTPPTPAPRTMPPTKPQPPARPPPPVLP 658
Query: 429 YGNYPP 434
PP
Sbjct: 659 ANRAPP 664
>UNIPROTKB|I3LMT3 [details] [associations]
symbol:RBM14 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0045944 GO:GO:0003676 GO:GO:0005667 GO:GO:0030374
GO:GO:0016575 GeneTree:ENSGT00390000020883 OMA:SLTSYGA
Ensembl:ENSSSCT00000026592 Uniprot:I3LMT3
Length = 520
Score = 132 (51.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 76/269 (28%), Positives = 97/269 (36%)
Query: 540 PYGG-HSNSQPVYSQGGLQSGYHQ-HQYGKPPYGMPAQGTQPQSYXXXXXXXX---XXXX 594
PYGG ++ + S GG + + YG + + G QP SY
Sbjct: 201 PYGGAQPSASALSSYGGQPAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAAS 260
Query: 595 XYQSQ--VPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYN-QPPAS--APG 649
Y +Q S SYG Q Y +YG+ A SYN QP AS A
Sbjct: 261 SYNTQGAASSLGSYGA-----QAASYGAQSAASSL--AYGAQAA--SYNAQPSASYNAQS 311
Query: 650 YPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQD 709
P A QA QP A Q A A Y +T +Y QP Y
Sbjct: 312 APYAAQQAASYSSQPAAYVA----QPATAAAYASHTPMAGSYGAQPVVQTQLNSYGAQAS 367
Query: 710 XXXXXXXXXXXXXXXTGQPG----Y-AQPAAT--QPSYDQS-ASQSTAYGVAQGT-AAAG 760
TG G Y AQP+AT P QS AS + +Y Q AAA
Sbjct: 368 MGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAAS 427
Query: 761 Y-GKTVSPQPGYPQ----YDSTQMYAAPR 784
Y G+ + G Q Y+ T++ + PR
Sbjct: 428 YRGQPGNAYDGAGQPSAXYERTRL-SPPR 455
Score = 43 (20.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 377 SGGFNQQAYRPRVP---TGPPQWGPRGSHPSQPMAY 409
+GGF+ QA +P P PP+ +QP Y
Sbjct: 109 TGGFDGQARQPTPPFFXRSPPRASYVAPLTAQPATY 144
>FB|FBgn0015907 [details] [associations]
symbol:bl "bancal" species:7227 "Drosophila melanogaster"
[GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0003729
"mRNA binding" evidence=NAS;TAS] [GO:0005634 "nucleus"
evidence=IC;IDA;TAS] [GO:0035062 "omega speckle" evidence=IDA]
[GO:0000785 "chromatin" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0045165 "cell fate commitment" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0007446 "imaginal disc growth"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0035107 "appendage morphogenesis" evidence=TAS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005737
GO:GO:0008283 GO:GO:0003729 GO:GO:0000785 GO:GO:0030529
GO:GO:0008134 GO:GO:0045165 GO:GO:0000381 GO:GO:0007446 HSSP:P61978
GO:GO:0035062 FlyBase:FBgn0015907 ChiTaRS:bl GO:GO:0035107
EMBL:AF275629 ProteinModelPortal:Q7KHL0 SMR:Q7KHL0 STRING:Q7KHL0
PRIDE:Q7KHL0 InParanoid:Q7KHL0 ArrayExpress:Q7KHL0 Bgee:Q7KHL0
Uniprot:Q7KHL0
Length = 508
Score = 125 (49.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 39/132 (29%), Positives = 64/132 (48%)
Query: 253 IGTLSNIDKAEKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+G L + A NAV A GSP+ Q ++ +P E G II
Sbjct: 381 VGALGGANGAGGF-NAVGGANGGPNGSPNAATN---VPQGHDPNNSTQVTIPKELAGAII 436
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG I+ ++ S A I I + LP S +RI+ ++G +QI++AQ ++++ + +
Sbjct: 437 GKGGGRIRRIRNESSAYIT-IDEPLPN---SNDRIITISGTPKQIQMAQYLLQQSVHEEW 492
Query: 372 RPSTLSG-GFNQ 382
+ LSG G Q
Sbjct: 493 QAKHLSGQGLEQ 504
Score = 50 (22.7 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P++ G +IGK G I+ ++ A + + D+ +I TL I +
Sbjct: 26 RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVD-DSQGPERTIQISADIESTLEIITEM 84
Query: 263 EK 264
K
Sbjct: 85 LK 86
>UNIPROTKB|B7ZAG4 [details] [associations]
symbol:TDRKH "cDNA, FLJ79178, highly similar to Tudor and
KH domain-containing protein" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF13014 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 EMBL:AL589765 UniGene:Hs.144439 HGNC:HGNC:11713
EMBL:AK316279 IPI:IPI00922525 SMR:B7ZAG4 STRING:B7ZAG4
Ensembl:ENST00000525790 Ensembl:ENST00000526413 Uniprot:B7ZAG4
Length = 140
Score = 106 (42.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
++E++VP E V LIIGR G IK L+ ++GARI + + + GD ER++ ++G Q
Sbjct: 54 EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDV--GD---ERVLLISGFPVQG 108
Query: 357 EIAQEMIKEV 366
E A++ + V
Sbjct: 109 EAARQFVLSV 118
>DICTYBASE|DDB_G0269334 [details] [associations]
symbol:DDB_G0269334 "C2 calcium-dependent membrane
targeting domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
dictyBase:DDB_G0269334 EMBL:AAFI02000005 InterPro:IPR018029
SUPFAM:SSF49562 PROSITE:PS50004 RefSeq:XP_645884.1
ProteinModelPortal:Q55E97 PRIDE:Q55E97 EnsemblProtists:DDB0304643
GeneID:8616824 KEGG:ddi:DDB_G0269334 eggNOG:KOG1327 OMA:TIRDNQN
Uniprot:Q55E97
Length = 319
Score = 126 (49.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 51/164 (31%), Positives = 56/164 (34%)
Query: 541 YGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYXXXXXXXXXXXXXYQSQV 600
Y G +N G + QYG+ P G + G+ PQ Y Q
Sbjct: 4 YPGQANLNKNSPAPGQYNSPAPGQYGQAP-G--SYGSYPQQTGYGGQQQTQQYSQYTQQT 60
Query: 601 PSAQSYGPNV--PHQQQYPYATSG-PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQA 657
Q YG P QQ YP G P QQ YP P Y PP GYP Q
Sbjct: 61 ---QQYGQYTQQPPQQGYPPQQQGYPPQQGYPPQQGYPPQQGY--PPQQ--GYPPQQ--- 110
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG 701
P Y G Q SYG YG Y Q AY P G
Sbjct: 111 -PAYGGYGAYQTTSYGAYQQQPAYGAYPQ-QPAYGAYPVAPVVG 152
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 49/149 (32%), Positives = 55/149 (36%)
Query: 616 YPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQV 675
YP + P ++PAP Y Q P S YPQQ G G QQ Y Q
Sbjct: 4 YPGQANLNKNSPAPGQYNSPAPGQYGQAPGSYGSYPQQTGYG-------GQQQTQQYSQY 56
Query: 676 AP-TAGYGQYTNT--QQAYPEQPATSNAGYGYQGTQDXXXXXXXXXXXXXXXTGQPGYAQ 732
T YGQYT QQ YP Q GY Q Q GY
Sbjct: 57 TQQTQQYGQYTQQPPQQGYPPQQQGYPPQQGYPPQQGYPPQQGY--------PPQQGYP- 107
Query: 733 PAATQPSYD-QSASQSTAYGVAQGTAAAG 760
P QP+Y A Q+T+YG Q A G
Sbjct: 108 PQ--QPAYGGYGAYQTTSYGAYQQQPAYG 134
WARNING: HSPs involving 89 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.128 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 784 621 0.00089 120 3 11 23 0.40 35
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 339
No. of states in DFA: 593 (63 KB)
Total size of DFA: 309 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.30u 0.08s 59.38t Elapsed: 00:00:02
Total cpu time: 59.39u 0.08s 59.47t Elapsed: 00:00:02
Start: Fri May 10 09:08:53 2013 End: Fri May 10 09:08:55 2013
WARNINGS ISSUED: 2