BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003942
(784 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/807 (59%), Positives = 554/807 (68%), Gaps = 58/807 (7%)
Query: 1 MAEEEVL--APASAAAADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAH 58
MAEEEV+ A AS A +D KRKL+DLEP EA E AE A D V +
Sbjct: 1 MAEEEVVVVAGASPAPSDHKRKLEDLEP-EAPEQAEPDGVQGADAGDYVANDE------- 52
Query: 59 GSEVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQH 118
SE KRPR++D D NG + EK DEV+ E +E+A+ + H
Sbjct: 53 -SEAKRPRVEDQD----DDLATENGYQREKEDEVIK-------ENVELTVENAQSQEAPH 100
Query: 119 SSVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNV 178
+ E +V+++Q S E KE T+E I E ++ ++ T +E E +P+
Sbjct: 101 PTEEAPEAVNDEQPSTDNEQKE---DTQEPSI----ENPQLENPQQPTGEEFE--KPAEE 151
Query: 179 VPQQVVDNSKSDDPS---STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
+PQQ V + S + +++ TMSRK+EVPNNKVGVLIGKAGDTIR+LQYNSGAKIQI
Sbjct: 152 IPQQEVGDVPSAEVQQQPTSETQTMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQI 211
Query: 236 TRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAA 295
TRDADADP++A+RPVE+IG+L NI+KAEKLI VIAEADAGGSPSLVARG ATAQA GAA
Sbjct: 212 TRDADADPYSASRPVELIGSLENINKAEKLIKDVIAEADAGGSPSLVARGFATAQAVGAA 271
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
EQV+I+VPNEKVGLIIG+GGETIK LQTRSGARIQLIPQHLPEGD SKER VRVTGD +Q
Sbjct: 272 EQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQSKERTVRVTGDKKQ 331
Query: 356 IEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG 415
IE+A+EMIKEV++Q VR ST G +NQQ YRPR PTGP QWGPRG HP QP YDY QRG
Sbjct: 332 IEMAREMIKEVMNQPVRSSTYPGSYNQQGYRPRGPTGPSQWGPRGPHPGQPTGYDY-QRG 390
Query: 416 PYPSQNPHYPHLPYGNYPPQQMAPRSNYGG------PPNMQG--AAGGYDYYGGQGGHVS 467
YPSQN Y YG YPPQQMAPRS++G P NMQG +GGYD+YGGQGGH
Sbjct: 391 AYPSQNQQYAPPSYGGYPPQQMAPRSSFGSGWEQRPPANMQGPPQSGGYDFYGGQGGHGP 450
Query: 468 DRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAA-PQQGY 526
D P + HS S+ H P+ +P GPPPSQ NYNYGQP +YG Q Y+ PQQGY
Sbjct: 451 DAPAAAPHSASMSIHAPGPSPSPGMGPPPSQGNYNYGQPQGPDYGQQAQYSQTGPPQQGY 510
Query: 527 GHGYD----DNHAPVQHPYGGHSNSQPVYSQGGLQSGY-HQHQYGKP-PYGMPAQGTQPQ 580
GHGYD + AP PYGGH SQPVY QGG QSGY Q YGKP YGM +Q Q
Sbjct: 511 GHGYDEPKYEGQAPTHPPYGGH-GSQPVYPQGGAQSGYPPQQPYGKPQSYGMASQAPAAQ 569
Query: 581 SYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY 640
SYGPPR QPGD+ PYQ + S QSYGPNVP QQYPYA+SGP QQ+YP+YGS PA D Y
Sbjct: 570 SYGPPRASQPGDV-PYQGPMSSNQSYGPNVPP-QQYPYASSGPMQQSYPAYGSQPAADGY 627
Query: 641 NQP-PASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSN 699
NQP PAS PGYPQQ GQ + Y QPGGQQAP Y QV P GYG Y +Q Y EQ +N
Sbjct: 628 NQPQPASGPGYPQQGGQPMSGYSQPGGQQAPGYAQVGPQGGYGPYP-SQPGYAEQQTANN 686
Query: 700 AGYGYQGTQDPSYGSSAPGSAYAA-PTGQPGYAQPAATQPSYDQSA-SQSTAYGVAQGTA 757
A YGYQG+ DP+Y +S P SAY A P+GQPGY QP TQPSYDQS +QS YG TA
Sbjct: 687 AAYGYQGSADPTY-NSGPASAYGAQPSGQPGYVQPTPTQPSYDQSIPAQSGGYGAVPATA 745
Query: 758 AAGYGKTVSPQPGYPQYDSTQMYAAPR 784
GYGK++SPQPGYPQYD+TQMY A R
Sbjct: 746 PVGYGKSLSPQPGYPQYDATQMYGAHR 772
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/796 (59%), Positives = 548/796 (68%), Gaps = 55/796 (6%)
Query: 18 KRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGSEVKRPRLDDDKTEKPDG 77
KRKL DLEP+EA AE A SD+ K D AE E KR R D+ K DG
Sbjct: 29 KRKLQDLEPEEAQAPAE------ANPSDDANKKSDDVAEGDTQEAKRLRTVDEN--KSDG 80
Query: 78 PVNVNGLKEEKPD---EVVDA-EQLTEDTT------KEEELESAEVKTEQHSSVEEQASV 127
+ NG+ ++KP+ E D EQ ED K EE +A+ + +E ASV
Sbjct: 81 LASENGIGKDKPEGGQEKSDKDEQEEEDVNAQETVGKGEEPANADDNDTVDNDTKEAASV 140
Query: 128 DNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNS 187
++K+ + D+KE K+++ ++++ + P +
Sbjct: 141 G--------DSKKDADDNDTVDNDIKEAASVGDSKKDDATEKQQEADEETARPPEEESEP 192
Query: 188 KSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
+SDD +T SRK+EVPN+KVGVLIGK GDTIRYLQYNSGAKIQITRD DADPH+ T
Sbjct: 193 ESDDAQTT-----SRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTT 247
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
RPVE+IGTLS+I KAEKLINAVIAEADAGGSPSLVARGL +AQ +G +Q+E++VPNEKV
Sbjct: 248 RPVELIGTLSSISKAEKLINAVIAEADAGGSPSLVARGLPSAQTAGVGDQIEMQVPNEKV 307
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GLIIGRGG+TIK LQ +SGARIQLIPQH PEGD SKER VRVTGD +QIEIA+EMIK+V+
Sbjct: 308 GLIIGRGGDTIKALQAKSGARIQLIPQHPPEGDASKERTVRVTGDRKQIEIAREMIKDVM 367
Query: 368 SQTVRPSTLSGGFN-QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPH 426
SQ VR S LSGG+N QQ+YRPR PTGP WGPRG H SQP YDY RGPYPSQN YP
Sbjct: 368 SQNVRLSPLSGGYNQQQSYRPRGPTGPSHWGPRGPHSSQPSPYDYHHRGPYPSQNSQYPP 427
Query: 427 LPYGNYPPQQMAPRSNYGG-----PPNMQGAAG---GYDYYGGQGGHVSDRPVSVSHSTS 478
YG YPPQ M PR N+G PPNMQG GYDYYGGQGGHV D P S S
Sbjct: 428 PSYGGYPPQHMGPRGNFGSGWEQRPPNMQGPVSHGGGYDYYGGQGGHVPDHPSSAPISNP 487
Query: 479 IPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYD----DNH 534
I GH + P+ P G PPSQANYNYGQ H +YGHQ PY+ A Q GYGHGYD D+H
Sbjct: 488 ITGHATGPSPTPGMGHPPSQANYNYGQQHGPDYGHQAPYSQAVSQHGYGHGYDEPKYDSH 547
Query: 535 APVQHPYGGHSNSQPVYSQGGLQSGY-HQHQYGK-PPYGMPAQGTQPQSYGPPRPGQPGD 592
A QHPY GH N QPVY Q Q GY Q QYGK P YGM QG PQSYGPPRPGQPGD
Sbjct: 548 AQTQHPY-GHGNPQPVYPQASNQPGYGAQQQYGKQPSYGMLPQGP-PQSYGPPRPGQPGD 605
Query: 593 IPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAPGYP 651
+ PYQ+ PS+QSYG NVP QQQYPYA+SGP QQ YPSYG+ A D YNQ PAS PGYP
Sbjct: 606 M-PYQAPNPSSQSYGSNVPPQQQYPYASSGPMQQAYPSYGAPSATDGYNQGLPASVPGYP 664
Query: 652 QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPS 711
QQAGQ+V +Y QPGGQQA +Y Q P+ GYG Y ++QQAYPEQPA ++AGYGYQG+QDP+
Sbjct: 665 QQAGQSVASYGQPGGQQASAYVQ-GPSGGYGSYPSSQQAYPEQPAQNSAGYGYQGSQDPA 723
Query: 712 YGSSAPGSAYAAP-TGQPGYAQPAATQPSYDQSASQST--AYGVAQGTAAAGYGKTVSPQ 768
Y ++ PGSAYAAP +GQ GYAQP TQPSYDQS QST A +A YGKTVSPQ
Sbjct: 724 Y-ATGPGSAYAAPASGQQGYAQPTPTQPSYDQSVPQSTAYAAAAPPASAPVSYGKTVSPQ 782
Query: 769 PGYPQYDSTQMYAAPR 784
PGYPQYDSTQMYAAPR
Sbjct: 783 PGYPQYDSTQMYAAPR 798
>gi|356495760|ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
Length = 793
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/819 (54%), Positives = 539/819 (65%), Gaps = 61/819 (7%)
Query: 1 MAEEEVLAPA-SAAAADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHG 59
MAEEEV+APA S +D KRKL+DL+P+ +A + +A+N+D A +
Sbjct: 1 MAEEEVVAPAASPVPSDNKRKLEDLQPENTESNANSISISDAENAD--------AAVSAE 52
Query: 60 SEVKRPRLDDDKTEKPDGPVN-VNGLKEEK-------PDEVVDAEQLTEDTTKEEELESA 111
+E KR RLDD + DG N NG ++E+ +E E +T + K ++ +
Sbjct: 53 TENKRLRLDDHQ----DGLANNTNGHQDEQVAEPGKETEERSTLENVTPEHDKTISVDHS 108
Query: 112 EVKTEQHSSVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEET-VKEE 170
E + +S E D ++ V++ +E + EE + ++++K+ T ++ + K+
Sbjct: 109 EATANEQTSAENNEPADAKEPHVEDSGQE---NAEELSKETQQQSKDSTEQDASSGDKQP 165
Query: 171 ESVEPS--NV-VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQY 227
SV+ + NV VP D S ++ D +RKIEVPNNKVGVLIGKAGDTIRYLQY
Sbjct: 166 NSVDTALHNVEVPYNKQDTSSGQKQPTSGDEITTRKIEVPNNKVGVLIGKAGDTIRYLQY 225
Query: 228 NSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA 287
NSGAKIQITRDADADP ATR VE+IG+L +IDKAEKL+NAVIAEADAGGSPSLVARGL+
Sbjct: 226 NSGAKIQITRDADADPLCATRSVELIGSLESIDKAEKLMNAVIAEADAGGSPSLVARGLS 285
Query: 288 TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIV 347
AQA+ +EQ++I+VPNEKVGLIIGRGGETIK LQT+SGARIQLIPQHLPEGD SKER V
Sbjct: 286 PAQATVGSEQIQIQVPNEKVGLIIGRGGETIKSLQTKSGARIQLIPQHLPEGDDSKERTV 345
Query: 348 RVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYR-PRVPTGPPQWGPRGSHPSQP 406
+VTGD RQIEIAQE+IKEV++Q VRPS SGGF QQAYR PR GPPQWG RGSH QP
Sbjct: 346 QVTGDKRQIEIAQELIKEVMNQPVRPS--SGGFGQQAYRPPRGSGGPPQWGQRGSHFGQP 403
Query: 407 MAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG------------GPPNMQGAAG 454
AYDY RGPYPS N Y PYGNY PQ MAPRS++G GPP G
Sbjct: 404 TAYDYQHRGPYPSHNQPYAPPPYGNY-PQHMAPRSSFGSGWEQRPHHSFQGPPPHNGGYE 462
Query: 455 GYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQ 514
Y GQGGH+S+ P S +S P H + P+ P+ P P+Q NYNYGQP +YGHQ
Sbjct: 463 YYG---GQGGHLSEAPPSTQLPSSAPPHGAGPSPVPSMVPTPAQVNYNYGQPQGQDYGHQ 519
Query: 515 QPYAHAA-PQQGYGHGYD----DNHAPVQHPYGGHSNSQPVYSQGGLQSGY-HQHQYGKP 568
Y+ A PQQGYG GYD +N AP QH YGGH NSQ Y Q Q Y QYGKP
Sbjct: 520 TAYSQAGLPQQGYGQGYDESKYENRAPTQHSYGGHVNSQSTYPQAVAQPNYPAPQQYGKP 579
Query: 569 P-YGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQT 627
P YGMP+QG PQSYGPPR QPGD+ PYQ P AQSYG N+P QQ YPYA SGP+Q
Sbjct: 580 PLYGMPSQGQPPQSYGPPRATQPGDM-PYQGSTP-AQSYGTNMPTQQPYPYAVSGPSQTA 637
Query: 628 YPSYGSAPAPDSYNQ-PPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTN 686
YPSYGSAPA D Y+ PPAS P Y Q Q P Y QP Q A SY QV PT GYG Y +
Sbjct: 638 YPSYGSAPAADGYSHPPPASGPPYTQPGAQ--PTYGQPAAQPAASYAQVGPT-GYGSYPS 694
Query: 687 TQQAYPEQPATSNAGYGYQGTQDPSYGS-SAPGSAYAAPTGQPGYAQPAATQPSYDQSAS 745
+Q +YPEQPA +NA YGYQ QDP Y + +AP + A P+GQPGY QP TQ Y+QS +
Sbjct: 695 SQPSYPEQPAPNNAVYGYQAPQDPGYSTGAAPAYSTAQPSGQPGYVQPTPTQTGYEQSNT 754
Query: 746 QSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
Q Y +A+A YGKT+SPQP QYDSTQ+Y APR
Sbjct: 755 QPAGYAAVPASASAVYGKTLSPQPAAYQYDSTQVYGAPR 793
>gi|357481253|ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
gi|355512247|gb|AES93870.1| Far upstream element-binding protein [Medicago truncatula]
Length = 807
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/846 (54%), Positives = 537/846 (63%), Gaps = 101/846 (11%)
Query: 1 MAEEEVL--APASA-AAADLKRKLDDL--EPDEALEHAEGMRDDEAKNSDEVEKNVDGFA 55
MAEEEV+ APA++ ++D KRK +DL +P E+ N+D E D A
Sbjct: 1 MAEEEVIVAAPATSPVSSDCKRKFEDLHSQPTES-------------NTDGAE--TDAAA 45
Query: 56 EAHGSEVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKT 115
A KRPRL+DD + N NG +E+K V +AE DT EE S EV+
Sbjct: 46 VAQDDVNKRPRLEDDNQ---NDLANTNGHQEKK---VAEAE---TDTDTEENAPSEEVQD 96
Query: 116 EQHSSVEEQAS-VDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESV- 173
+ EE A D +I V E+ KE+ D KE +K +E+ +++ S
Sbjct: 97 VSKDNSEETAEPTDTNEILV-EDVKEIPVEDSGKEND-KEPSKATEQPSKESTEQDASSG 154
Query: 174 ----EPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNS 229
+ S++ P D S + T +RKIEVP+NKVGVLIGK+GDTIRYLQYNS
Sbjct: 155 DKQPDSSSIDPTLQHDTSSGQKQPISGSDTTTRKIEVPSNKVGVLIGKSGDTIRYLQYNS 214
Query: 230 GAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATA 289
GAKIQITRDADADPH++TRPVE+IGTL +IDKAEKL+NAVIAEADAGGSP+LVARGL+ A
Sbjct: 215 GAKIQITRDADADPHSSTRPVELIGTLESIDKAEKLMNAVIAEADAGGSPALVARGLSPA 274
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
QA ++Q++I+VPNEKVGLIIG+GGETIK LQT++GARIQLIPQHLPEGD SKER V+V
Sbjct: 275 QAIVGSDQIQIQVPNEKVGLIIGKGGETIKSLQTKTGARIQLIPQHLPEGDDSKERTVQV 334
Query: 350 TGDMRQIEIAQEMIKEVLSQT----------------VRP---------STLSGGFNQQA 384
TGD RQIEIAQEMIKEVLSQ ++P + SGGF QQA
Sbjct: 335 TGDKRQIEIAQEMIKEVLSQIWPLPFPWGQHCFLDVALKPPIAGCLMPIRSSSGGFGQQA 394
Query: 385 YR-PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNY 443
YR PR GPPQWG RGSH QP +YDY RGPYPS N Y PYGNY PQ MAPRS+Y
Sbjct: 395 YRPPRGSGGPPQWGQRGSHYGQPPSYDYQHRGPYPSHNQSYAPPPYGNY-PQHMAPRSSY 453
Query: 444 G------------GPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPA 491
G GPP+ GGYDYYGGQ GH S+ P S H +S+P H + P+ P+
Sbjct: 454 GSGWEQRPHQSFQGPPSHN---GGYDYYGGQSGHSSEAPSSAQHPSSVPQHGTGPSPLPS 510
Query: 492 GGPPPSQANYNYGQPHTSEYGHQQPYAHAA-PQQGYGHGYD----DNHAPVQHPYGGHSN 546
GP P+Q NYNYGQP +YGHQ PY A PQQGYG GYD +N P Q+PYGGHSN
Sbjct: 511 MGPSPAQMNYNYGQPQGQDYGHQTPYQQAGHPQQGYGQGYDESKYENRGPAQYPYGGHSN 570
Query: 547 SQPVYSQGGLQSGYH-QHQYGKPP-YGM-PAQGTQPQSYGPPRPGQPGDIPPYQSQVPSA 603
QP Y Q Q+ Y QYGKPP YG+ P+QG PQSYG PR QPG+I PYQ P A
Sbjct: 571 PQPTYPQASAQANYAPPQQYGKPPLYGVPPSQGQHPQSYGHPRATQPGEI-PYQGSTP-A 628
Query: 604 QSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPG--YPQQAGQAVPNY 661
QSYG QQ YPYA+SGP+Q YP+YGSAPA D Y+ P SAPG Y Q GQ P+Y
Sbjct: 629 QSYGTV---QQPYPYASSGPSQAAYPTYGSAPAADGYSH-PQSAPGQVYAQPGGQ--PSY 682
Query: 662 PQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGSAY 721
QPG Q SY QV PT GYG Y ++QQ YPEQPA ++AGYGYQ QDP+Y S A +
Sbjct: 683 GQPGAQAVASYAQVGPT-GYGSYPSSQQTYPEQPAPNSAGYGYQAPQDPAYSSGAAQTYS 741
Query: 722 AAPTGQPGYAQPAATQPSYDQSASQSTAY--GVAQGTAAAGYGKTVSPQP-GYPQYDSTQ 778
AAPT QPGY QP TQ YDQS Q Y A A YGKTVSPQP Y QYDSTQ
Sbjct: 742 AAPTVQPGYVQPTPTQTGYDQSNPQPAGYAAVPPAAGAPAAYGKTVSPQPAAYAQYDSTQ 801
Query: 779 MYAAPR 784
+Y APR
Sbjct: 802 VYGAPR 807
>gi|356538917|ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786134 [Glycine max]
Length = 794
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/806 (53%), Positives = 523/806 (64%), Gaps = 65/806 (8%)
Query: 16 DLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGSEVKRPRLDDDKTEKP 75
D KRKL+DL+P+ A +A + D A N+D+ + + +E KR RLDD +
Sbjct: 17 DNKRKLEDLQPENAESNANSISD--AVNADDAAVSAE-------TENKRLRLDDHQ---- 63
Query: 76 DGPVNVNGLKEEK---PDEVVDAEQLTEDTTKEE-----ELESAEVKTEQHSSVEEQASV 127
DG N NG ++E+ P + + E+ T E E S E + +S E
Sbjct: 64 DGLANTNGHQDEQVAEPGKETEERSALENVTPEHDQTISEYPSLEATANEQTSAEISEPA 123
Query: 128 DNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEET-VKEEESVEPS--NV-VPQQV 183
D+++ V++ +E + EE + ++++K+ T ++ + K+ SV+ + NV VP
Sbjct: 124 DSKEPPVEDSGQE---NAEEPSKETQQQSKDSTEQDASSGDKQPNSVDTALHNVEVPYNK 180
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
D S ++ D +RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP
Sbjct: 181 QDTSSGQKQPTSGDEITTRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 240
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVP 303
ATR VE+IG+L +IDKAEKL+NAVIAEADAGGSPSLVARGL+ AQA+ +EQ++I+VP
Sbjct: 241 LCATRSVELIGSLESIDKAEKLMNAVIAEADAGGSPSLVARGLSPAQATVGSEQIQIQVP 300
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
NEKVGLIIGR GETIK LQT+SGARIQLIPQHLPEGD SKER V+VTGD RQI+IAQE+I
Sbjct: 301 NEKVGLIIGRSGETIKSLQTKSGARIQLIPQHLPEGDDSKERTVQVTGDKRQIQIAQELI 360
Query: 364 KEVLSQTVRPSTLSGGFNQQAYR--PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQN 421
KEV++Q VRPS SGGF QQA+ GPPQWG RGSH P AYDY RGP+P+ N
Sbjct: 361 KEVMNQPVRPS--SGGFGQQAHHPPRGGSGGPPQWGQRGSHFGHPTAYDYQHRGPFPAHN 418
Query: 422 PHYPHLPYGNYPPQQMAPRSNYG------------GPPNMQGAAGGYDYYGGQGGHVSDR 469
Y PYGNY PQ M PRS++G GPP G Y G GGH+SD
Sbjct: 419 QPYAPAPYGNY-PQHMTPRSSFGSGWEQRPHHSFQGPPPHNGGYEYYG---GHGGHLSDA 474
Query: 470 PVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAA-PQQGYGH 528
P S +S P + + P+ P+ GP P+Q NYNYGQP +YGHQ Y+ A PQQGYG
Sbjct: 475 PPSTQLPSSAPPYGAGPSPVPSMGPTPAQVNYNYGQPQGQDYGHQTTYSQAGLPQQGYGQ 534
Query: 529 GYD----DNHAPVQHPYGGHSNSQPVYSQGGLQSGY-HQHQYGKPP-YGMPAQGTQPQSY 582
GYD +N AP QH YGGH NSQ Y Q G Q Y Q+GKPP YGMP+ G PQSY
Sbjct: 535 GYDESKYENRAPTQHSYGGHVNSQSTYPQAGAQPNYPAPQQFGKPPLYGMPS-GQPPQSY 593
Query: 583 GPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ 642
GPPR QPGD+ PYQ P AQSYG N+P QQ YPYA SGP+Q YPSYGSAPA D Y+
Sbjct: 594 GPPRATQPGDM-PYQGSTP-AQSYGTNMPTQQPYPYAVSGPSQTAYPSYGSAPATDGYSH 651
Query: 643 -PPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYG-QYTNTQQAYPEQPATSNA 700
PPAS P Y Q A Q P Y QP Q A SY QV PT GYG Y + Q +YPEQPA +NA
Sbjct: 652 PPPASFPPYTQPAAQ--PTYGQPAAQPAASYTQVGPT-GYGSSYPSLQPSYPEQPAPNNA 708
Query: 701 GYGYQGTQDPSYGS-SAPGSAYAAPTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAA 759
YGYQ QDP Y + +AP + A P+GQPGY QP TQ Y+QS +Q Y +A A
Sbjct: 709 VYGYQAPQDPGYSTGAAPAYSTAQPSGQPGYVQPTPTQTGYEQSNTQPAGYAAVPASAPA 768
Query: 760 GYGKTVSPQP-GYPQYDSTQMYAAPR 784
YGKT+SPQP YPQYDSTQ+Y APR
Sbjct: 769 AYGKTLSPQPAAYPQYDSTQVYGAPR 794
>gi|224145055|ref|XP_002325510.1| predicted protein [Populus trichocarpa]
gi|222862385|gb|EEE99891.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/591 (67%), Positives = 438/591 (74%), Gaps = 29/591 (4%)
Query: 210 KVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAV 269
+VGVLIGK GDTIRYLQYNSGAKIQITRD++AD + TRPVE+IGTLS+I AEKLINAV
Sbjct: 4 QVGVLIGKGGDTIRYLQYNSGAKIQITRDSEADSQSTTRPVELIGTLSSIRNAEKLINAV 63
Query: 270 IAEADAGGSPSLVARGLAT-AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
IAEADAGGSPSLVA GLA+ AQ +G +Q+EI VPNEKVGLIIGRGGETIKGLQ +SGAR
Sbjct: 64 IAEADAGGSPSLVAMGLASGAQTAGVGDQLEIPVPNEKVGLIIGRGGETIKGLQAKSGAR 123
Query: 329 IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFN-QQAYRP 387
IQLIPQHLPEGDGSKER VRVTGD RQ+E+A+EMI +V++QTVRPSTLS FN QQ+YRP
Sbjct: 124 IQLIPQHLPEGDGSKERTVRVTGDKRQVEMAREMIMDVMNQTVRPSTLSSSFNQQQSYRP 183
Query: 388 RVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG-- 445
R PTGP WGPRG H +Q M YDY RGPYPS YP YG+Y PQ MAPRSNY
Sbjct: 184 RGPTGPAHWGPRGPHSNQKMPYDYQHRGPYPSHGSQYPPA-YGDY-PQHMAPRSNYSSGW 241
Query: 446 ---PPNMQGA---AGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQA 499
P N+QG GYDYY QGGH SD PVS T IPG S + AP G PPSQ
Sbjct: 242 EQRPANVQGPHTHTSGYDYY-SQGGHASDHPVSGPMPTPIPGPASRHSPAPVMGGPPSQV 300
Query: 500 NYNYGQPHTSEYGHQQPYAHAAP-QQGYGHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQS 558
NY+YGQ H +YGHQ PY+ AAP Q YGHGYD+ ++PY G+ +SQP YSQ G Q
Sbjct: 301 NYSYGQSHGPDYGHQAPYSQAAPSHQSYGHGYDE----PKYPY-GYGSSQPAYSQAGNQP 355
Query: 559 GY-HQHQYGK-PPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNV--PHQQ 614
GY Q QYGK P +GMP+QG PQSYGPPRPGQPGD+ YQ + S+Q YGPN P QQ
Sbjct: 356 GYGAQQQYGKQPSFGMPSQGPPPQSYGPPRPGQPGDM-SYQGPMQSSQLYGPNAPPPLQQ 414
Query: 615 QYPYATSGPTQQTYPSYGSAPAPDSYNQP-PASAPGYPQQAGQAVPNYPQPGGQQAPSYG 673
QYPYA+SGP QQ YPSYGS D YNQ AS PGYPQQ GQ VP QPGGQ A Y
Sbjct: 415 QYPYASSGPMQQPYPSYGSGSGSDGYNQAQTASGPGYPQQGGQPVPTPGQPGGQAAAGYA 474
Query: 674 QVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQP 733
Q P GYG Y + QQ YPEQ A +NAGYGYQG+QDP+YGS+ AY AP Q GYAQP
Sbjct: 475 Q-GPAGGYGSYPSAQQGYPEQQAANNAGYGYQGSQDPAYGSAP---AYGAPASQQGYAQP 530
Query: 734 AATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
A TQPSYDQS QS YG A TA GYGKTVSPQPGYPQYDSTQMYAAPR
Sbjct: 531 APTQPSYDQSVPQSAGYGAAPATAPVGYGKTVSPQPGYPQYDSTQMYAAPR 581
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQ-ITRDADADPHAATRPVEIIGTLSNIDK 261
+I VPN KVG++IG+ G+TI+ LQ SGA+IQ I + + R V + G ++
Sbjct: 94 EIPVPNEKVGLIIGRGGETIKGLQAKSGARIQLIPQHLPEGDGSKERTVRVTGDKRQVEM 153
Query: 262 AEKLINAVI 270
A ++I V+
Sbjct: 154 AREMIMDVM 162
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 422/815 (51%), Positives = 520/815 (63%), Gaps = 59/815 (7%)
Query: 1 MAEEEVLAPASAAA--ADLKRKLDDL--EPDEALE--HAEGMRDDEAKNSDEVEKNVDGF 54
MAEE V+A +A+ D KRKL DL EP EA E HAE + A ++ +V + +
Sbjct: 1 MAEEVVVATGAASPEPLDHKRKLVDLDSEPTEATEENHAEPIEGSAAPDAADVPISDE-- 58
Query: 55 AEAHGSEVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVK 114
SE KRPRL+ KP+G + NG +E+K +E+ E + +++EE S EV
Sbjct: 59 -----SEYKRPRLEG----KPEGNASENGHEEKKEEELEPKEDYKQ-SSEEEPPASVEVL 108
Query: 115 TEQHSSVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVE 174
E+ + EQ + + + +++ + A I +++T+E++ KEE E E+
Sbjct: 109 PEKEGT--EQPTEEPHEAGDAQDSAAEISQDSAAEISQEDKTQELS-KEESQPSEVEAAP 165
Query: 175 PSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQ 234
P + ++ + N++ D PSS ++T + K+EVPN+KVGVLIGKAGDTIRYLQYNSGAKIQ
Sbjct: 166 P---LQEEDISNAEQDQPSSESETT-TYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQ 221
Query: 235 ITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGA 294
I RDA+ADP+ TRPVEIIGT NI KAE+LINAVIAEADAGGSPSL+ARGL ++ +
Sbjct: 222 IMRDAEADPNRLTRPVEIIGTSENIKKAEELINAVIAEADAGGSPSLIARGLTSSHSIAT 281
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMR 354
AEQ++++VPNEKVGLIIGRGGETIK LQTRSGARIQLIPQ+LPEGD SKER +RVTGD +
Sbjct: 282 AEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVTGDKK 341
Query: 355 QIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQR 414
QIEIA +MIKEV++QTVRPS S GFNQQAYRPR P GP QWG RG HPS P YDYP R
Sbjct: 342 QIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHPSHPAGYDYPHR 401
Query: 415 GPYPSQNPHYPHLPYGNYPPQQMAPRSNYGG---------PPNMQGAAGGYDYYGGQGGH 465
GPYPS N Y H YGNYP Q PRS+YG ++GGYDYY GQ H
Sbjct: 402 GPYPSHNTQYQHPGYGNYPQQMGGPRSSYGSGWEQRPPPSMQGPPPSSGGYDYY-GQRSH 460
Query: 466 VSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQG 525
SD P S ++P H P+ AP GPP +Q++YNY Q YGH PY+ AAP Q
Sbjct: 461 YSDAPPS-HFPGAMPSHAPGPSPAPTHGPPQTQSSYNYNQQQGQGYGHTAPYSQAAPHQS 519
Query: 526 YGHGYD---DNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQYGKPP--YGMPAQGTQPQ 580
YGHGY+ D+HAP Q+PY GH N+Q Y Q G Q Y QY P YG+ QG PQ
Sbjct: 520 YGHGYEQKYDHHAPAQNPYSGHGNAQ-HYPQAGTQQVYPGQQYDNKPSSYGVSQQGPPPQ 578
Query: 581 SYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSY 640
SYG PR GQP + PYQ A +YG N+ QQ YPY + G TQQ YP YG+AP+ D Y
Sbjct: 579 SYGAPRVGQPAE--PYQGGSAPA-TYGQNMQPQQTYPYQSGGSTQQ-YPPYGAAPSTDGY 634
Query: 641 NQ--PPASAPGYPQQAGQAVPNYPQPGGQQAPSYG-QVAPTAGYGQYTNTQQAYPEQ--P 695
NQ ++A GY QQ QA Y QP QQ +YG QVAP A YGQY +QQ Y EQ
Sbjct: 635 NQAPAASAAAGYSQQGAQA--GYGQPSVQQPSAYGQQVAPAAAYGQYPTSQQGYSEQAAA 692
Query: 696 ATSNAGYGYQGTQDP----SYGSSAPGSAYAAPTGQPGYAQPAATQPSYDQSASQSTAYG 751
T+ YQ QDP ++A + A +GQ GY Q ATQP+YDQS QS YG
Sbjct: 693 NTAAGYAAYQAPQDPAAYSGGTAAAAAAYTAPASGQQGYTQQTATQPTYDQSIQQSGGYG 752
Query: 752 VAQGTAAAGYGKTVS--PQPGYPQYDSTQMYAAPR 784
+A GYGK+VS PQPGYPQYDSTQ+Y A R
Sbjct: 753 TVPSSAPVGYGKSVSPQPQPGYPQYDSTQVYGASR 787
>gi|145336377|ref|NP_174629.3| far upstream element-binding protein [Arabidopsis thaliana]
gi|110739541|dbj|BAF01679.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739658|dbj|BAF01737.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739944|dbj|BAF01877.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|332193492|gb|AEE31613.1| far upstream element-binding protein [Arabidopsis thaliana]
Length = 763
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 372/836 (44%), Positives = 448/836 (53%), Gaps = 153/836 (18%)
Query: 1 MAEEEVLAPASAAAADLKRKLDDLEPDEALE--HAEGMRDDEAKNSDEVEKNVDGFAEAH 58
MAEEEV+A +D KRKL++LE E LE HA + +D + + D KN + +
Sbjct: 1 MAEEEVIA-IPVQPSDHKRKLENLE-SEILEQQHAGSIDNDVSVDDD---KNASDYCQP- 54
Query: 59 GSEVKRPRLDDDK----------------------TEKPDGPVNVNGLKE---EKPDEVV 93
KRP+LDD+ TEKP + N EK E +
Sbjct: 55 ----KRPKLDDEAVDGLGIGGTVENSGDVESKEEGTEKPIAQSDENQDGNPLIEKVQETI 110
Query: 94 DAEQ---LTEDTTKEEE--LESAEVKTEQHSSVEEQASVD-----NQQISVKEETKEVLF 143
DAE+ ED K E+ L + EV T Q SVEE V+ N+ +ET +V+
Sbjct: 111 DAEESDNKMEDNGKPEDNQLVTPEVVTSQDVSVEESKEVNISGSQNEGEDDSKETNDVVA 170
Query: 144 STEEAFIDVKEETKEVT----VKEEETVKEEESVEPSNVVPQ-QVVDNSKSDDPSST--- 195
E V+ +KEVT KE+E ES E + V ++ D SK + ST
Sbjct: 171 QKE-----VENGSKEVTDCDSQKEDEANAGGESKEVNGSVSHDEIGDESKEVNGGSTHKE 225
Query: 196 --DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
D + +R+I+VP++KVG LIGK G+ +RYLQ NSGAKIQI RDA+ADP +A RPVEII
Sbjct: 226 VDDTQSTTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEII 285
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
GT+S I+KAEKLINAVIAE +AGG P+L ARG+ EQ+EIKVP++KVG+IIGR
Sbjct: 286 GTVSCIEKAEKLINAVIAEVEAGGVPALAARGVP--------EQMEIKVPSDKVGVIIGR 337
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GGETIK +QT+S ARIQLIPQ+ EGD SKER VR++GD RQI+IA +IK+V+ Q RP
Sbjct: 338 GGETIKNMQTKSRARIQLIPQN--EGDASKERTVRISGDKRQIDIATALIKDVMYQDGRP 395
Query: 374 STLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYP 433
S SGGFNQQAY+PR P GPPQWG RG H M Y+Y GPYPSQ H+ G YP
Sbjct: 396 SPYSGGFNQQAYQPRGPGGPPQWGSRGPHGPHSMPYNYHHGGPYPSQGSHFRPPNSGGYP 455
Query: 434 PQQMAPRSNYGG-----PPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQ 488
PQ M PRS YG PP+ +G YDYYG QGG Q
Sbjct: 456 PQHMPPRSGYGSGWEQRPPH----SGPYDYYGRQGG-----------------------Q 488
Query: 489 APAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNH--APVQH------- 539
P GP PS H Y+ A QQ YG YD H P H
Sbjct: 489 NP--GPVPS---------------HGASYSQAGAQQTYGQMYDQPHYDNPPMHQSYGGYG 531
Query: 540 ------PYGGHSN-----SQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQ--SYGP-P 585
P G + S+P QG + GY + PP +P QG P SYG P
Sbjct: 532 GSQQGYPSAGGQHQMQQPSRPYGMQGSAEQGYGPPRPAAPPGDVPYQGPTPAAPSYGSTP 591
Query: 586 RPGQPGDIP--PYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYN-- 641
G P P P+A SYG N+ QQQY YA+S PTQQTYPSY SA D YN
Sbjct: 592 AAASYGSTPAAPSYGSTPAAPSYGSNMAQQQQYGYASSAPTQQTYPSYSSAAPSDGYNGT 651
Query: 642 QPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG 701
QPPA AP Y Q Q Q G YGQV PT GY Y +TQ AY PA SN
Sbjct: 652 QPPAVAPAYEQHGAQPASGVQQTSG----GYGQVPPTGGYSSYPSTQPAYGNTPAQSNGN 707
Query: 702 YGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTA 757
YGY G+Q PSYG SAYAAPTGQ Y+Q A Q Y+QSA+QS Y A GTA
Sbjct: 708 YGYIGSQYPSYGGGN-ASAYAAPTGQTAYSQTAPPQAGYEQSATQSAGYAAAPGTA 762
>gi|22328551|ref|NP_192745.2| KH domain-containing protein [Arabidopsis thaliana]
gi|332657435|gb|AEE82835.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 725
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 362/813 (44%), Positives = 464/813 (57%), Gaps = 117/813 (14%)
Query: 1 MAEEEVLAPASAAAADLKRKLDDLEP-----DEALEHAEGMRDDEAKNSDEVEKNVD-GF 54
M EE+ + S DLKRKLD++E D++ + ++ + AK DE + +D G
Sbjct: 1 MTEEDFVV-ISTPPVDLKRKLDEVELNGNIVDDSNQTSDSSQAKRAKLEDEAQDGLDYGN 59
Query: 55 AEAHGS--EVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAE 112
+ +GS EVK ++++ ++P KEE D V E++ +D +E E+
Sbjct: 60 TQENGSSMEVK----EEEQLQEP---------KEENQDSVPLVEEV-QDPIHADESENKI 105
Query: 113 VKTEQHSSVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEES 172
+Q + ++ DNQQ +++ V + ID +++KEV + +EE+
Sbjct: 106 CSVDQPTD-DQVKPEDNQQGCIED----VNGGEHQKVID--DDSKEVNDGSSQENGKEEN 158
Query: 173 VEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK 232
E Q+ VD ++S +R+I+VP++KVGVLIGK G+TIRYLQ+NSGAK
Sbjct: 159 KEVDGEKSQKEVDGTQS----------TTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAK 208
Query: 233 IQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQAS 292
IQI RD++ADP +A RPVEIIG+++ I+ AEKLI+AVIAEA+AGGSP+LVARG + A
Sbjct: 209 IQILRDSEADPSSALRPVEIIGSVACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAI 268
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
G EQ+EIKVPN+KVGLIIGRGGETIK +QTRSGAR QLIPQH EGDG KER VR++GD
Sbjct: 269 GIPEQIEIKVPNDKVGLIIGRGGETIKNMQTRSGARTQLIPQHA-EGDGLKERTVRISGD 327
Query: 353 MRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYP 412
QI+IA +MIK+V++Q RPS+ SGG+NQ AYRP+ P GPPQWG RG H P YDY
Sbjct: 328 KMQIDIATDMIKDVMNQNARPSSYSGGYNQPAYRPQGPGGPPQWGSRGPHAPHP--YDYH 385
Query: 413 QRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPPNMQ-GAAGGYDYYGGQGGHVSDRPV 471
RGPY SQ +Y +G YPPQ M PR YG + + +G Y+YYG QG +
Sbjct: 386 PRGPYSSQGSYYNSPGFGGYPPQHMPPRGGYGTDWDQRPPYSGPYNYYGRQGAQSAGPVP 445
Query: 472 SVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYD 531
S P GGPP SQ +Y YGQ H EYGH PY+ QQ YG Y+
Sbjct: 446 PPSGPVPSPAF---------GGPPLSQVSYGYGQSHGPEYGHAAPYSQTGYQQTYGQTYE 496
Query: 532 ----DNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQY-GKPPYGMPAQGTQPQSYGPPR 586
D++ P+Q PYGG S P GG QSGY+Q Q G PYGM QG Q YGPP+
Sbjct: 497 QPKYDSNPPMQPPYGG---SYP--PAGGGQSGYYQMQQPGVRPYGM-QQGPVQQGYGPPQ 550
Query: 587 P---GQPGDIPPYQSQVPSAQSYGPN--VPHQQQYPYATS-GPT-QQTYPSYGSAPAPDS 639
P GD+ PYQ P+A SYG P QQQY Y +S GP QQTYPSY SAP D+
Sbjct: 551 PAAAASSGDV-PYQGATPAAPSYGSTNMAPQQQQYGYTSSDGPVQQQTYPSYSSAPPSDA 609
Query: 640 YN---QPPASAPGYPQQAGQ-AVPNY---PQPGGQQAPSYGQVAPTAGYGQYTNTQQAYP 692
YN Q PA+ P Y QQ+ Q A Y A GQVAPT GY YP
Sbjct: 610 YNNGTQTPATGPAYQQQSVQPASSTYDQTGAQQAAAAGYGGQVAPTGGY--------TYP 661
Query: 693 EQPATSNAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAATQPSYDQS-ASQSTAYG 751
T P+YGS A Y+Q A TQ Y+Q A+Q+ Y
Sbjct: 662 --------------TSQPAYGSQA------------AYSQAAPTQTGYEQQPATQAAVYA 695
Query: 752 VAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
A GTA KT SPQ Y QYD++Q+YA PR
Sbjct: 696 TAPGTAPV---KTQSPQSAYAQYDASQVYATPR 725
>gi|297813443|ref|XP_002874605.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320442|gb|EFH50864.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 730
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 377/822 (45%), Positives = 451/822 (54%), Gaps = 130/822 (15%)
Query: 1 MAEEEVLAPASAAAADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGS 60
MAEEEV+ S DLKRKLD+ +HA N D V VD + S
Sbjct: 1 MAEEEVVV-ISTPPVDLKRKLDE-------QHA-------GSNGDIV---VDSNPVSDSS 42
Query: 61 EVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESA----EVKTE 116
+ KR +LDD E DG + N + EV + EQL E K E +S EV+
Sbjct: 43 QAKRAKLDD---EAQDGLDHGNTQENGSSMEVKEEEQLQE--PKYENQDSVPLVDEVQDP 97
Query: 117 QHSSVEEQASVD-------------NQQISVK----EETKEVLFSTEEAFIDVKEETKEV 159
H++ E + D NQQ ++ EE K V + E +V EE K
Sbjct: 98 IHANESENNTCDVAHAADDHVKPEDNQQGCIENNNVEECKNV--NGGEPQKEVDEEIK-- 153
Query: 160 TVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAG 219
+ + + KE + V+ N + + DD ST +R I+VPN+KVGVLIGK G
Sbjct: 154 VLNDGNSQKEIKEVDGEN-------SHKEVDDTQST-----TRTIDVPNSKVGVLIGKGG 201
Query: 220 DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSP 279
+TIRYLQ+NSGAKIQI RD++ADP++A RPVEIIGT++ I+ AE+LI+AVIAEA+AGGSP
Sbjct: 202 ETIRYLQFNSGAKIQILRDSEADPNSALRPVEIIGTVACIENAERLISAVIAEAEAGGSP 261
Query: 280 SLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEG 339
+LVARG + A G EQ+EIKVPN+KVGLIIGRGGETIK +QTRSGARIQLIPQH EG
Sbjct: 262 ALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGGETIKDMQTRSGARIQLIPQHA-EG 320
Query: 340 DGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPR 399
DG KER VR++GD QI+IA +MIK+V++Q RPS SG +NQ AYRPR P GPPQWG R
Sbjct: 321 DGLKERTVRISGDKMQIDIATDMIKDVMNQNARPSPYSGCYNQPAYRPRGPGGPPQWGSR 380
Query: 400 GSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG-GPPNMQGAAGGYDY 458
G H P YDY RGPY SQ HY YG YPPQ M PR YG G +G Y+Y
Sbjct: 381 GPHAPHP--YDYHPRGPYSSQGSHYNSPGYGGYPPQHMPPRGGYGPGWDQRPPYSGPYNY 438
Query: 459 YGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYA 518
YG QG S PV GH PA GGPPPSQ +Y Y Q H EYG+ PY+
Sbjct: 439 YGRQGAQ-SSGPVPPPS-----GHVPSPA---LGGPPPSQVSYGYRQSHGPEYGNAAPYS 489
Query: 519 HAAPQQGYGHGYD----DNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQY-GKPPYGMP 573
QQ YG Y+ DN+ P+Q PYGG S P GG Q GY Q Q G PYGM
Sbjct: 490 QTGYQQTYGQTYEQPKYDNNPPMQPPYGG---SYP--PAGGGQPGYSQMQQPGVRPYGM- 543
Query: 574 AQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPN--VPHQQQYPY-ATSGPT-QQTYP 629
QG Q YGPPRP PYQ P+A YG P QQQY Y +T GP QQTYP
Sbjct: 544 QQGPVQQGYGPPRPAASSGDVPYQGATPAAAPYGSTNMAPQQQQYGYTSTGGPVQQQTYP 603
Query: 630 SYGSAPAPDSYN---QPPASAPGYPQQAGQAVPN----YPQPGGQQAPSYGQVAPTAGYG 682
SY SAP D YN Q PA+ P Y QQ+ Q + A GQVAPT GY
Sbjct: 604 SYSSAPPSDGYNNGTQTPATGPAYQQQSVQPASSTHDQTGAQQAAAAGYGGQVAPTGGYS 663
Query: 683 QYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAATQPSYDQ 742
Y TQ P+YGS A + A Q GY Q ATQP+
Sbjct: 664 SYPTTQ---------------------PAYGSQA--AYSQAAATQVGYEQQPATQPA--- 697
Query: 743 SASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
Y G+A KT SP Y QY+++Q+YAAPR
Sbjct: 698 ------GYAATPGSAQV---KTQSPLSAYAQYEASQVYAAPR 730
>gi|4539010|emb|CAB39631.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|7267703|emb|CAB78130.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 748
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 357/822 (43%), Positives = 453/822 (55%), Gaps = 112/822 (13%)
Query: 1 MAEEEVLAPASAAAADLKRKLDDLEP-----DEALEHAEGMRDDEAKNSDEVEKNVDGFA 55
M EE+ + S DLKRKLD++E D++ + ++ + AK DE + +
Sbjct: 1 MTEEDFVV-ISTPPVDLKRKLDEVELNGNIVDDSNQTSDSSQAKRAKLEDEAQDGLGVSV 59
Query: 56 EAHGSEVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKT 115
++ G NG E V + EQL E KEE +S +
Sbjct: 60 SLASYKLNLSHCCSSAFVVDYGNTQENGSSME----VKEEEQLQE--PKEENQDSVPLVE 113
Query: 116 EQHSSVEEQASVDNQQISVKEETKEVLF--STEEAFID----------VKEETKEVTVKE 163
E + S +N+ SV + T + + ++ I+ + +++KEV
Sbjct: 114 EVQDPIHADES-ENKICSVDQPTDDQVKPEDNQQGCIEDVNGGEHQKVIDDDSKEVNDGS 172
Query: 164 EETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
+ +EE+ E Q+ VD ++S +R+I+VP++KVGVLIGK G+TIR
Sbjct: 173 SQENGKEENKEVDGEKSQKEVDGTQS----------TTRRIDVPSSKVGVLIGKGGETIR 222
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
YLQ+NSGAKIQI RD++ADP +A RPVEIIG+++ I+ AEKLI+AVIAEA+AGGSP+LVA
Sbjct: 223 YLQFNSGAKIQILRDSEADPSSALRPVEIIGSVACIESAEKLISAVIAEAEAGGSPALVA 282
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
RG + A G EQ+EIKVPN+KVGLIIGRGGETIK +QTRSGAR QLIPQH EGDG K
Sbjct: 283 RGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGGETIKNMQTRSGARTQLIPQHA-EGDGLK 341
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHP 403
ER VR++GD QI+IA +MIK+V++Q RPS+ SGG+NQ AYRP+ P GPPQWG RG H
Sbjct: 342 ERTVRISGDKMQIDIATDMIKDVMNQNARPSSYSGGYNQPAYRPQGPGGPPQWGSRGPHA 401
Query: 404 SQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYGGPPNMQ-GAAGGYDYYGGQ 462
P YDY RGPY SQ +Y +G YPPQ M PR YG + + +G Y+YYG Q
Sbjct: 402 PHP--YDYHPRGPYSSQGSYYNSPGFGGYPPQHMPPRGGYGTDWDQRPPYSGPYNYYGRQ 459
Query: 463 GGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAP 522
G + S P GGPP SQ +Y YGQ H EYGH PY+
Sbjct: 460 GAQSAGPVPPPSGPVPSPAF---------GGPPLSQVSYGYGQSHGPEYGHAAPYSQTGY 510
Query: 523 QQGYGHGYD----DNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQY-GKPPYGMPAQGT 577
QQ YG Y+ D++ P+Q PYGG S P GG QSGY+Q Q G PYGM QG
Sbjct: 511 QQTYGQTYEQPKYDSNPPMQPPYGG---SYP--PAGGGQSGYYQMQQPGVRPYGM-QQGP 564
Query: 578 QPQSYGPPRP---GQPGDIPPYQSQVPSAQSYGPN--VPHQQQYPYATS-GPT-QQTYPS 630
Q YGPP+P GD+ PYQ P+A SYG P QQQY Y +S GP QQTYPS
Sbjct: 565 VQQGYGPPQPAAAASSGDV-PYQGATPAAPSYGSTNMAPQQQQYGYTSSDGPVQQQTYPS 623
Query: 631 YGSAPAPDSYN---QPPASAPGYPQQAGQ-AVPNY---PQPGGQQAPSYGQVAPTAGYGQ 683
Y SAP D+YN Q PA+ P Y QQ+ Q A Y A GQVAPT GY
Sbjct: 624 YSSAPPSDAYNNGTQTPATGPAYQQQSVQPASSTYDQTGAQQAAAAGYGGQVAPTGGY-- 681
Query: 684 YTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAATQPSYDQS 743
YP T P+YGS A Y+Q A TQ Y+Q
Sbjct: 682 ------TYP--------------TSQPAYGSQA------------AYSQAAPTQTGYEQQ 709
Query: 744 -ASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQMYAAPR 784
A+Q+ Y A GTA KT SPQ Y QYD++Q+YA PR
Sbjct: 710 PATQAAVYATAPGTAPV---KTQSPQSAYAQYDASQVYATPR 748
>gi|224136127|ref|XP_002327387.1| predicted protein [Populus trichocarpa]
gi|222835757|gb|EEE74192.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 259/423 (61%), Positives = 288/423 (68%), Gaps = 36/423 (8%)
Query: 371 VRPSTLSGGFNQQ-AYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPY 429
+RP+TLS FNQQ +YRPRVPTGP WGPRG H +Q M YDY RGPYP+ Y
Sbjct: 1 MRPATLSSSFNQQQSYRPRVPTGPAHWGPRGHHSNQQMPYDY-HRGPYPT---------Y 50
Query: 430 GNYPPQQMAPRSNYGG------PPNMQGA---AGGYDYYGGQGGHVSDRPVSVSHSTSIP 480
G YPPQQMAPRSNY PPNMQG +GGYDYY GQGGHVSD PVS ST +P
Sbjct: 51 GGYPPQQMAPRSNYSSGWEQRPPPNMQGFHPHSGGYDYYSGQGGHVSDHPVSAPMSTPLP 110
Query: 481 GHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAP-QQGYGHGYDDNHAPVQH 539
GH S + AP G PPSQ NYNYGQ H +YGHQ PY+ AAP QQ YG+GYD+ ++
Sbjct: 111 GHVSRHSPAPVMGGPPSQVNYNYGQSHGPDYGHQAPYSQAAPSQQSYGYGYDE----PKY 166
Query: 540 PYGGHSNSQPVYSQGGLQSGY-HQHQYGK-PPYGMPAQGTQPQSYGPPRPGQPGDIPPYQ 597
PY GH +SQP Y Q Q GY Q QYGK P YGMP+QG PQSYGPPRPGQPGD YQ
Sbjct: 167 PY-GHGSSQPAYPQASNQPGYGAQQQYGKQPSYGMPSQGPPPQSYGPPRPGQPGDA-SYQ 224
Query: 598 SQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQ-PPASAPGYPQQAGQ 656
+ S+Q YG P QQQYPYA+SGP QQ YP YGS A D YNQ PPAS PGYPQQ GQ
Sbjct: 225 GPIQSSQLYG--QPPQQQYPYASSGPMQQAYPPYGSGSASDGYNQAPPASGPGYPQQGGQ 282
Query: 657 AVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSA 716
VP Y QP GQ A + P GYG Y ++ Q +PEQ A + AGYGYQ +QDP+YGS
Sbjct: 283 PVPTYGQPAGQAAAAGYGQVPAGGYGGYPSS-QGFPEQQAANTAGYGYQVSQDPAYGS-- 339
Query: 717 PGSAYAAPTGQPGYAQPAATQPSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDS 776
G A++APT Q YAQP A QPSYDQS QS Y A TA GYGKTVSPQPG+PQYDS
Sbjct: 340 -GPAFSAPTSQQAYAQPTAAQPSYDQSVPQSAGYVAAPATAPVGYGKTVSPQPGFPQYDS 398
Query: 777 TQM 779
TQM
Sbjct: 399 TQM 401
>gi|223947885|gb|ACN28026.1| unknown [Zea mays]
gi|224031081|gb|ACN34616.1| unknown [Zea mays]
gi|413921492|gb|AFW61424.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 706
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 295/734 (40%), Positives = 367/734 (50%), Gaps = 145/734 (19%)
Query: 34 EGMRDDEAKNSDEVEK-NVDGFAEAHGSEVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEV 92
EG + N ++E+ D A G + KRPR+D + PD
Sbjct: 34 EGAATAQVDNKRKLEEAGADAEANGTGEDAKRPRVDGE------------------PDAA 75
Query: 93 VDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASVDNQQISVKEETKEVLFSTEEAFIDV 152
EQ Q+ SV+ ++ + EE K + T+ A D
Sbjct: 76 TGIEQ-------------------QNDGSSVNVSVNVEEPAAAEEDK--VAPTDGAATDG 114
Query: 153 KEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVG 212
+T + + +++ +E + PQ D ++ +SR IEVPN++VG
Sbjct: 115 DNDTA-APATDSQAGSDDKPLEAAAEAPQPESD-------AAAVAQEISRMIEVPNSRVG 166
Query: 213 VLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
VLIGKAG+TIR LQ +SGAKIQIT+DADAD +A TRPVE++GTL ++DKAE LI +VIAE
Sbjct: 167 VLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGTLGSVDKAELLIKSVIAE 226
Query: 273 ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
A+AGGSP+L+ARG + Q +EQ E+ VP+ KVGLIIG+GG+ IKG+QT+SGARIQLI
Sbjct: 227 AEAGGSPALIARGFGSGQP--GSEQFEMTVPDNKVGLIIGKGGDAIKGMQTKSGARIQLI 284
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSGGFNQQAYRPRVPT 391
PQH PEG ERIVRVTG+ +QIE+A+++IK+ ++QT R + SGG+ Q YRP+
Sbjct: 285 PQHPPEGVTLTERIVRVTGNKKQIELAKDLIKQAMNQTFSRHTNQSGGYGPQGYRPQGQG 344
Query: 392 GPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG-----GP 446
QWGPR SQ Y YP RG P QN Y + PYG+YPPQQ PR G GP
Sbjct: 345 AASQWGPR----SQNHGYGYPPRGMPPPQN--Y-NTPYGSYPPQQGPPRGGMGWDQRQGP 397
Query: 447 PNMQGAAGGYDYYGGQGGHVSD-RPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYN-YG 504
P GG Y QG D +P S PP NYN YG
Sbjct: 398 PPHPSYQGGASDYYKQGSQPYDSQPPSY---------------------PPGPGNYNSYG 436
Query: 505 QPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPVYSQ--GGLQSGYHQ 562
Q YG Q Y APQQ Y HGY D Y +Q Y Q G Q GY Q
Sbjct: 437 QSQGPNYGQPQ-YPQHAPQQNYSHGYGDPR------YNAPPPNQQYYGQPPMGPQQGYPQ 489
Query: 563 H--QYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYAT 620
Y +PPY P Q PPR G P YQ+ A SYGP H Y
Sbjct: 490 QPDPYARPPYSGPGQ-------WPPR-GAPAADGSYQA---PAASYGPPSQHPSAYGQTY 538
Query: 621 SGPT-------QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYG 673
S T Q G APAP Y Q +APGYPQQ G
Sbjct: 539 SAATGSDGYAQQGYPQQGGQAPAP--YGQSAPAAPGYPQQQG------------------ 578
Query: 674 QVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGT-QDPSYGSSAPGSAYAAP---TGQPG 729
GY QY TQ AY EQ A +NA YGYQG DP+YGS+ P Y P TGQ G
Sbjct: 579 ------GYAQYPQTQPAYGEQAAQTNASYGYQGAPADPNYGSAYPQPGYGPPGQATGQAG 632
Query: 730 YAQPAATQPSYDQS 743
YA AA+QP+Y Q+
Sbjct: 633 YASSAASQPAYGQA 646
>gi|413921493|gb|AFW61425.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 699
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 290/702 (41%), Positives = 357/702 (50%), Gaps = 125/702 (17%)
Query: 91 EVVDAEQ---LTEDTTKEEELESAEVKTEQHSSVEEQASVDNQQISVKEETKEVLFSTEE 147
EVV E+ + E ++ +A + + +EE A D + E+ K E
Sbjct: 14 EVVAPEEHPAVAESAVAAQQEGAATAQVDNKRKLEE-AGADAEANGTGEDAKRPRVDGIE 72
Query: 148 AFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSK---SDDPSSTDDSTM---- 200
D V V EE EE+ V P++ +++ +D + +DD +
Sbjct: 73 QQNDGSSVNVSVNV-EEPAAAEEDKVAPTDGAATDGDNDTAAPATDSQAGSDDKPLEAAA 131
Query: 201 ----------------SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
SR IEVPN++VGVLIGKAG+TIR LQ +SGAKIQIT+DADAD +
Sbjct: 132 EAPQPESDAAAVAQEISRMIEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSN 191
Query: 245 AATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPN 304
A TRPVE++GTL ++DKAE LI +VIAEA+AGGSP+L+ARG + Q +EQ E+ VP+
Sbjct: 192 ALTRPVELVGTLGSVDKAELLIKSVIAEAEAGGSPALIARGFGSGQP--GSEQFEMTVPD 249
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
KVGLIIG+GG+ IKG+QT+SGARIQLIPQH PEG ERIVRVTG+ +QIE+A+++IK
Sbjct: 250 NKVGLIIGKGGDAIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTGNKKQIELAKDLIK 309
Query: 365 EVLSQTV-RPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPH 423
+ ++QT R + SGG+ Q YRP+ QWGPR SQ Y YP RG P QN
Sbjct: 310 QAMNQTFSRHTNQSGGYGPQGYRPQGQGAASQWGPR----SQNHGYGYPPRGMPPPQN-- 363
Query: 424 YPHLPYGNYPPQQMAPRSNYG-----GPPNMQGAAGGYDYYGGQGGHVSD-RPVSVSHST 477
Y + PYG+YPPQQ PR G GPP GG Y QG D +P S
Sbjct: 364 Y-NTPYGSYPPQQGPPRGGMGWDQRQGPPPHPSYQGGASDYYKQGSQPYDSQPPSY---- 418
Query: 478 SIPGHPSVPAQAPAGGPPPSQANYN-YGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAP 536
PP NYN YGQ YG Q Y APQQ Y HGY D
Sbjct: 419 -----------------PPGPGNYNSYGQSQGPNYGQPQ-YPQHAPQQNYSHGYGDPR-- 458
Query: 537 VQHPYGGHSNSQPVYSQ--GGLQSGYHQH--QYGKPPYGMPAQGTQPQSYGPPRPGQPGD 592
Y +Q Y Q G Q GY Q Y +PPY P Q PPR G P
Sbjct: 459 ----YNAPPPNQQYYGQPPMGPQQGYPQQPDPYARPPYSGPGQ-------WPPR-GAPAA 506
Query: 593 IPPYQSQVPSAQSYGPNVPHQQQYPYATSGPT-------QQTYPSYGSAPAPDSYNQPPA 645
YQ+ A SYGP H Y S T Q G APAP Y Q
Sbjct: 507 DGSYQA---PAASYGPPSQHPSAYGQTYSAATGSDGYAQQGYPQQGGQAPAP--YGQSAP 561
Query: 646 SAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQ 705
+APGYPQQ G GY QY TQ AY EQ A +NA YGYQ
Sbjct: 562 AAPGYPQQQG------------------------GYAQYPQTQPAYGEQAAQTNASYGYQ 597
Query: 706 GT-QDPSYGSSAPGSAYAAP---TGQPGYAQPAATQPSYDQS 743
G DP+YGS+ P Y P TGQ GYA AA+QP+Y Q+
Sbjct: 598 GAPADPNYGSAYPQPGYGPPGQATGQAGYASSAASQPAYGQA 639
>gi|326519350|dbj|BAJ96674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 683
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 278/593 (46%), Positives = 327/593 (55%), Gaps = 95/593 (16%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+R I+VPN KVGVLIGKAG+TIR LQ +SGAKIQIT+DAD A TRPVE++GT+ +I
Sbjct: 151 TTRLIDVPNTKVGVLIGKAGETIRNLQMSSGAKIQITKDADVSSDAMTRPVELVGTVESI 210
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
DKAE+LI +VIAEA+AGGSP+L+A+G + Q+ +EQ E+ VP+ KVGLIIG+GGETIK
Sbjct: 211 DKAEQLIKSVIAEAEAGGSPALIAKGFGSGQS--GSEQFEMLVPDNKVGLIIGKGGETIK 268
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSG 378
LQTRSGARIQLIPQH P G ER VRVTG+ +QIE A+E+IK+ +SQT R +T SG
Sbjct: 269 NLQTRSGARIQLIPQHPPAGTTLTERTVRVTGNKKQIEAAKELIKQAMSQTFPRNTTQSG 328
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMA 438
G+ Q + P+ QWGPR SQP Y YP RG P QN Y PYG Y PQQ
Sbjct: 329 GYGPQHHHPQGHGPASQWGPR----SQPQQYGYPPRG--PPQNAPYSQPPYGGY-PQQPP 381
Query: 439 PRSNYG-----GPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGG 493
PR G GPP QG GGYDYY QG + + P+QAP
Sbjct: 382 PRGGMGWDQRQGPPPHQG--GGYDYY-KQGSQPYESQPPNYPPGPGNYNSYGPSQAP--- 435
Query: 494 PPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNH----APVQHPYGGHSNSQP 549
+YGQP Y +AP Q YG GY D AP Q YG QP
Sbjct: 436 --------SYGQPQ---------YPQSAPPQNYGPGYGDPRYSAPAPAQQYYG-----QP 473
Query: 550 VYSQGGLQSGYHQH--QYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYG 607
G Q GY Q Y +PPYG P Q PPR P D Q P SY
Sbjct: 474 P---AGPQQGYPQQPDPYARPPYGGPGQ-------WPPRGSAPADG---AYQAPPPTSYA 520
Query: 608 PNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQ 667
P P QQ Y QTYP+ PD Y Q GYPQQ+GQ Y GQ
Sbjct: 521 P--PAQQPPAYG------QTYPT-----GPDGYAQ-----QGYPQQSGQGPAAY----GQ 558
Query: 668 QAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQG-TQDPSYGSSAPGSAY-AAPT 725
AP+ + GY QY +Q AY +Q A +NA YGYQG DP+YG++ P S Y AAPT
Sbjct: 559 SAPAGQGYSQQGGYVQYPASQPAYGDQSAQNNANYGYQGPPADPNYGNAYPQSGYAAAPT 618
Query: 726 -GQPGYAQ------PAATQPSYDQSA--SQSTAYGVAQGTAAAGYGKTVSPQP 769
GQPGY Q PA PSYDQSA + + Y K VSPQP
Sbjct: 619 SGQPGYGQAGYTQPPATNPPSYDQSAPPAAQSGYAAPAANPQPAVAKGVSPQP 671
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 212/378 (56%), Positives = 265/378 (70%), Gaps = 40/378 (10%)
Query: 1 MAEEEVL--APASAAAADLKRKLDDLEPDEALEHAE--GMRDDEAKNSDEVEKNVDGFAE 56
MAEEEV+ A AS A +D KRKL+DLEP EA E AE G++ +A + +
Sbjct: 1 MAEEEVVVVAGASPAPSDHKRKLEDLEP-EAPEQAEPDGVQGADAGD----------YVA 49
Query: 57 AHGSEVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAE-QLTEDTTKEEELESAEVKT 115
SE KRPR++D + D NG + EK DEV+ +LT +E+A+ +
Sbjct: 50 NDESEAKRPRVED----QDDDLATENGYQREKEDEVIKENVELT--------VENAQSQE 97
Query: 116 EQHSSVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEP 175
H + E +V+++Q S E KE T+E I E ++ ++ T +E E +P
Sbjct: 98 APHPTEEAPEAVNDEQPSTDNEQKE---DTQEPSI----ENPQLENPQQPTGEEFE--KP 148
Query: 176 SNVVPQQVVDNSKSDDPS---STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK 232
+ +PQQ V + S + +++ TMSRK+EVPNNKVGVLIGKAGDTIR+LQYNSGAK
Sbjct: 149 AEEIPQQEVGDVPSAEVQQQPTSETQTMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAK 208
Query: 233 IQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQAS 292
IQITRDADADP++A+RPVE+IG+L NI+KAEKLI VIAEADAGGSPSLVARG ATAQA
Sbjct: 209 IQITRDADADPYSASRPVELIGSLENINKAEKLIKDVIAEADAGGSPSLVARGFATAQAV 268
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
GAAEQV+I+VPNEKVGLIIG+GGETIK LQTRSGARIQLIPQHLPEGD SKER VRVTGD
Sbjct: 269 GAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQSKERTVRVTGD 328
Query: 353 MRQIEIAQEMIKEVLSQT 370
+QIE+A+EMIKEV++Q
Sbjct: 329 KKQIEMAREMIKEVMNQI 346
>gi|226529800|ref|NP_001141507.1| uncharacterized protein LOC100273619 [Zea mays]
gi|194704864|gb|ACF86516.1| unknown [Zea mays]
gi|223950149|gb|ACN29158.1| unknown [Zea mays]
gi|413941634|gb|AFW74283.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 702
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 295/741 (39%), Positives = 372/741 (50%), Gaps = 158/741 (21%)
Query: 91 EVVDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASVDNQQISVKEETKE--VLFSTEEA 148
E V A+ + T+++ + + + + + VE+Q +D ++ E + A
Sbjct: 42 EEVSADAEVKGTSEDAKRPRVDGEPDAATGVEQQ--IDGSSVNADPAAPEDKAALNVGAA 99
Query: 149 FIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPN 208
+ + + V +E+ +E + PQQ D ++T +SRKIEVPN
Sbjct: 100 MDGDNDTPAPAPAPDSQAVSDEKPLEAAAEAPQQEGD-------AATAVQEISRKIEVPN 152
Query: 209 NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINA 268
+KVGV+IGKAG+TIR LQ +SGAKIQIT+D +AD +A TRPVE++GT ++DKAE+LI +
Sbjct: 153 SKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGSVDKAEQLIKS 212
Query: 269 VIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
VIAEA+AGGSP+L+ARG + Q +EQ E+ VP+ KVGLIIG+GGETIKG+QT+SGAR
Sbjct: 213 VIAEAEAGGSPALIARGFGSGQP--GSEQFEMTVPDNKVGLIIGKGGETIKGMQTKSGAR 270
Query: 329 IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST-LSGGFNQQAYRP 387
IQLIPQH PEG ERIVRVTG+ +QIE A+++IK+ ++QT T SGG+ Q YRP
Sbjct: 271 IQLIPQHPPEGVTLTERIVRVTGNKKQIEAAKDLIKQAMNQTFSKHTNQSGGYGPQGYRP 330
Query: 388 RVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG--- 444
+ Q GPR SQ Y YP RG P QN Y + PYG YPPQ + R G
Sbjct: 331 QGHGAASQLGPR----SQNHGYGYPPRGMPPPQN--Y-NAPYGGYPPQGPS-RGGMGWDQ 382
Query: 445 --GP---PNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQA 499
GP P+ QG GG DYY + S + + P + PP
Sbjct: 383 RPGPPTHPSYQG--GGSDYY---------KQGSQPYDSQPPSY------------PPGPG 419
Query: 500 NYN-YGQPHTSEYGHQQPYAHAAPQQGYGHGYDD---NHAPVQHPYGGHSNSQPVYSQGG 555
NYN YGQ YG Q Y APQQ Y HGY D N P Y G P
Sbjct: 420 NYNSYGQSQGPNYGQPQ-YPQHAPQQNYSHGYGDPRYNAPPPNQQYYGQPPMAP------ 472
Query: 556 LQSGYHQH--QYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQ 613
Q GY Q Y +PPY P Q T PR G P YQ+ SYGP P Q
Sbjct: 473 -QQGYPQQPDPYARPPYSGPGQWT-------PR-GAPAADGSYQA---PPSSYGP--PSQ 518
Query: 614 QQYPYATSGPTQQTYPSYGSAPAPD----------------SYNQPPASAPGYPQQAGQA 657
Q Y +YG+A PD SY Q +APGYPQQ Q
Sbjct: 519 QPPAYGQ---------TYGAATGPDGYGQQGYPQQGGQVPASYGQSAPAAPGYPQQGTQ- 568
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGT-QDPSYGSSA 716
GY QY TQ AY +Q A +NA YGYQG DP+YGS+
Sbjct: 569 --------------------QGGYAQYPQTQPAYGDQAAQANANYGYQGAPADPNYGSAY 608
Query: 717 P---------------GSAYAAPT------GQPGYAQPAATQPSYDQSAS-QSTAYGVA- 753
P G A +AP GQ GY QP PSYDQSA+ +T G A
Sbjct: 609 PQQPGYGPPGQATGQAGYASSAPAASQPVYGQAGYTQPPTNPPSYDQSAAPAATQSGYAA 668
Query: 754 -----QGTAAAGYGKTVSPQP 769
Q AAA K VSPQP
Sbjct: 669 PPANPQQPAAA---KGVSPQP 686
>gi|219886695|gb|ACL53722.1| unknown [Zea mays]
Length = 702
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 295/741 (39%), Positives = 370/741 (49%), Gaps = 158/741 (21%)
Query: 91 EVVDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASVDNQQISVKEETKE--VLFSTEEA 148
E V A+ + T+++ + + + + + VE+Q +D ++ E + A
Sbjct: 42 EEVSADAEVKGTSEDAKRPRVDGEPDAATGVEQQ--IDGSSVNADPAAPEDKAALNVGAA 99
Query: 149 FIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPN 208
+ + V +E+ +E + PQQ D ++T +SRKIEVPN
Sbjct: 100 MDGDNNTPAPAPAPDSQAVSDEKPLEAAAEAPQQEGD-------AATAVQEISRKIEVPN 152
Query: 209 NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINA 268
+KVGV+IGKAG+TIR LQ +SGAKIQIT+D +AD +A TRPVE++GT ++DKAE+LI +
Sbjct: 153 SKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGSVDKAEQLIKS 212
Query: 269 VIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
VIAEA+AGGSP+L+ARG + Q +EQ E+ VP+ KVGLIIG+GGETIKG+QT+SGAR
Sbjct: 213 VIAEAEAGGSPALIARGFGSGQP--GSEQFEMTVPDNKVGLIIGKGGETIKGMQTKSGAR 270
Query: 329 IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST-LSGGFNQQAYRP 387
IQLIPQH PEG ERIVRVTG+ +QIE A+++IK+ ++QT T SGG+ Q YRP
Sbjct: 271 IQLIPQHPPEGVTLTERIVRVTGNKKQIEAAKDLIKQAMNQTFSKHTNQSGGYGPQGYRP 330
Query: 388 RVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG--- 444
+ Q GPR SQ Y YP RG P QN Y + PYG YPPQ + R G
Sbjct: 331 QGHGAASQLGPR----SQNHGYGYPPRGMPPPQN--Y-NAPYGGYPPQGPS-RGGMGWDQ 382
Query: 445 --GP---PNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQA 499
GP P+ QG GG DYY + S + + P + PP
Sbjct: 383 RPGPPTHPSYQG--GGSDYY---------KQGSQPYDSQPPSY------------PPGPG 419
Query: 500 NYN-YGQPHTSEYGHQQPYAHAAPQQGYGHGYDD---NHAPVQHPYGGHSNSQPVYSQGG 555
NYN YGQ YG Q Y APQQ Y HGY D N P Y G P
Sbjct: 420 NYNSYGQSQGPNYGQPQ-YPQHAPQQNYSHGYGDPRYNAPPPNQQYYGQPPMAP------ 472
Query: 556 LQSGYHQH--QYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQ 613
Q GY Q Y +PPY P Q T PR G P YQ+ SYGP P Q
Sbjct: 473 -QQGYPQQPDPYARPPYSGPGQWT-------PR-GAPAADGSYQA---PPSSYGP--PSQ 518
Query: 614 QQYPYATSGPTQQTYPSYGSAPAPD----------------SYNQPPASAPGYPQQAGQA 657
Q Y +YG+A PD SY Q +APGYPQQ Q
Sbjct: 519 QPPAYGQ---------TYGAATGPDGYGQQGYPQQGGQVPASYGQSAPAAPGYPQQGTQ- 568
Query: 658 VPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGT-QDPSYGSSA 716
GY QY TQ AY +Q A NA YGYQG DP+YGS+
Sbjct: 569 --------------------QGGYAQYPQTQPAYGDQAAQPNANYGYQGAPADPNYGSAY 608
Query: 717 P---------------GSAYAAPT------GQPGYAQPAATQPSYDQSAS-QSTAYGVA- 753
P G A +AP GQ GY QP PSYDQSA+ +T G A
Sbjct: 609 PQQPGYGPPGQATGQAGYASSAPAASQPVYGQAGYTQPPTNPPSYDQSAAPAATQSGYAA 668
Query: 754 -----QGTAAAGYGKTVSPQP 769
Q AAA K VSPQP
Sbjct: 669 PPANPQQPAAA---KGVSPQP 686
>gi|125559909|gb|EAZ05357.1| hypothetical protein OsI_27561 [Oryza sativa Indica Group]
gi|125601956|gb|EAZ41281.1| hypothetical protein OsJ_25788 [Oryza sativa Japonica Group]
Length = 700
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 268/620 (43%), Positives = 318/620 (51%), Gaps = 130/620 (20%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
SR I VPNNKVGVLIGK+G+TIR LQ NSGAKIQIT+DA+AD +A TR VE++GTL +I
Sbjct: 152 TSRIINVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESI 211
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
DKAE+LI VIAEADAGGSP+L+ARG + Q+ +EQ E+ VP+ KVGLIIG+GGETIK
Sbjct: 212 DKAERLIKNVIAEADAGGSPALIARGFGSGQS--GSEQFEMLVPDNKVGLIIGKGGETIK 269
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSG 378
LQTRSGARIQLIPQH PEG ER VR+TG+ +QIE A++MIK+ +SQT R SG
Sbjct: 270 TLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEAAKDMIKQAMSQTFSRHGAQSG 329
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMA 438
G+ QQ YRP+ QWGPR SQP P QN Y PYG YP QQ
Sbjct: 330 GYGQQNYRPQGHGAASQWGPR----SQPQPGYGYPPRGPPPQNMPY-SQPYGGYP-QQPP 383
Query: 439 PRSNYGG------PPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAG 492
PR G PP+ GGYDYY +P PG + + P+
Sbjct: 384 PRGGMGWDQRQGPPPHASHHGGGYDYY-----KQGSQPYEGQPPNYPPGPGNYNSYGPSQ 438
Query: 493 GPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPVYS 552
GP NYGQP Y +AP Q YG GY D Y + +Q Y
Sbjct: 439 GP-------NYGQPQ---------YPQSAPPQNYGPGYGDPR------YNAPAPNQQYYG 476
Query: 553 Q--GGLQSGYHQHQ------YGKP----PYGMPA-----QGTQPQSYGPPRPGQPGDIPP 595
Q G Q GY Q YG P P G PA Q P SYGPP
Sbjct: 477 QPPAGPQQGYPPQQDPYARPYGGPGQWAPRGAPAGDGTYQAPPPTSYGPP---------- 526
Query: 596 YQSQVPSA--QSYGPNVPHQQQYPYATSGP---TQQTYPSYGSAPAPDSYNQPPASAPGY 650
SQ P A Q+YGP T+GP +QQ+YP G A AP +Y Q + PGY
Sbjct: 527 --SQQPPAYGQTYGP-----------TTGPDGYSQQSYPQQG-AQAPATYGQSAPAGPGY 572
Query: 651 PQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGT-QD 709
QQ Q GY QY +Q AY +Q A +NA YGYQG D
Sbjct: 573 AQQGAQ---------------------QGGYAQYPQSQPAYGDQAAQNNANYGYQGAPAD 611
Query: 710 PSYGSSAPGSAYAA------------------PTGQPGYAQPAATQPSYDQSAS--QSTA 749
P+YG++ P + Y + GQPGY QP P+YDQSA +
Sbjct: 612 PNYGNAYPQAGYGSTPASGQAGYAAAPAAGQPGYGQPGYTQPPTNPPAYDQSAQPPAQSG 671
Query: 750 YGVAQGTAAAGYGKTVSPQP 769
Y K VSPQP
Sbjct: 672 YAAPPANPQPAVAKGVSPQP 691
>gi|357144424|ref|XP_003573287.1| PREDICTED: uncharacterized protein LOC100834117 [Brachypodium
distachyon]
Length = 707
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 268/678 (39%), Positives = 337/678 (49%), Gaps = 112/678 (16%)
Query: 130 QQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKS 189
Q + + +E + ++ E +D E K T + +T+ E++ P + V + +
Sbjct: 93 QTVEASGKIEEPVAASAEGAVDA-ENGKVATAEGSQTISEDK---PQMTATEAVTEAPQQ 148
Query: 190 DDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
+ +T + IEVPNNKVGVLIGK G+TIR LQ +SGAKIQIT+D + A TRP
Sbjct: 149 QQEGAATGATNTHTIEVPNNKVGVLIGKNGETIRNLQNSSGAKIQITKDGEVASDALTRP 208
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGL 309
VE++GT +IDKAE+LI +VIAEA+AGGSP+L+A+G Q+ +EQ E+ VP+ KVGL
Sbjct: 209 VELVGTQESIDKAEQLIKSVIAEAEAGGSPALIAKGFGPGQS--GSEQFEMSVPDNKVGL 266
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IIG+GGETIK +QTRSGARIQLIPQH PEG ER VRVTG+ +QIE A+E+IK+ ++Q
Sbjct: 267 IIGKGGETIKNMQTRSGARIQLIPQHPPEGTTLTERTVRVTGNKKQIEAAKELIKQAMNQ 326
Query: 370 TV-RPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP 428
R ++ SGG+ QQ + P+ QWGPR SQP Y YP RGP P P+ P
Sbjct: 327 VFARNTSQSGGYGQQHHHPQGHGPASQWGPR----SQPQPYGYPPRGPPPQNVPY--SQP 380
Query: 429 YGNYPPQQMAPRSNYGG------PPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGH 482
YG Y PQQ PR G PP+ GGYDYY P
Sbjct: 381 YGGY-PQQPPPRGGMGWDQRQGPPPHSSHQGGGYDYY-------KQGPPPYEGQPPNYPP 432
Query: 483 PSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNH----APVQ 538
PPS YGQP PY + PQQ YG GY D AP Q
Sbjct: 433 GPGNYNNYGPSQPPS-----YGQP---------PYPQSGPQQNYGPGYGDPRYSAPAPTQ 478
Query: 539 HPYGGHSNSQPVYSQGGLQSGYHQH--QYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPY 596
YG QP G Q GY Q Y +P YG P Q QP+ PP GD Y
Sbjct: 479 QYYG-----QPP---AGPQQGYPQQPDPYARPAYGGPGQ-WQPRGGAPPA----GDG-TY 524
Query: 597 QSQVPSAQSYGPNVPHQQQYPYATSGPT--QQTYPSYGSAPAPDSYNQPPASAPGYPQQA 654
Q+ P++ + P Y T+GP Q AP +Y Q + PGYPQQ
Sbjct: 525 QAPPPASYAPPAQQPPAYGQSYPTTGPDGYAQQGYPQQGGQAPAAYGQTAPAGPGYPQQ- 583
Query: 655 GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGT-QDPSYG 713
GY QY TQ AY +Q A +NA YGYQG DP+YG
Sbjct: 584 ------------------------GGYAQYPPTQPAYGDQSAQNNANYGYQGAPADPNYG 619
Query: 714 SSAPGSAYAAPT-------------------GQPGYAQ-PAATQPSYDQSAS--QSTAYG 751
++ P S Y PT GQ GY Q P A P+YDQSA+ + Y
Sbjct: 620 NAYPQSGY-GPTAAGSQPGYAAAPAAGQPGYGQAGYTQPPPANPPAYDQSAAPPAQSGYA 678
Query: 752 VAQGTAAAGYGKTVSPQP 769
K VSPQP
Sbjct: 679 APAANPQPAVAKGVSPQP 696
>gi|224136131|ref|XP_002327388.1| predicted protein [Populus trichocarpa]
gi|222835758|gb|EEE74193.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/396 (50%), Positives = 236/396 (59%), Gaps = 93/396 (23%)
Query: 15 ADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFA---EAHGS-EVKRPRLDDD 70
+D KRKL+DLEP E LE A E +DE E DG A E GS + KR R+D+
Sbjct: 16 SDHKRKLEDLEP-ETLEEA------EPSPADEQEPEEDGKADDVEDGGSPDSKRLRIDES 68
Query: 71 KTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHSSVE-EQASVDN 129
KT DG + NG K ++ DE H+ E E+ V+N
Sbjct: 69 KT---DGLASENGFKGDESDE--------------------------HAREEAEEPCVEN 99
Query: 130 QQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKS 189
+ K++ E L EE E KE+ +E +N Q VD+SK+
Sbjct: 100 EH--GKDDNAEPL----------SEEVPETNDKEDPNADNQE----TNTTDQATVDDSKT 143
Query: 190 DD---PSSTD-------------------DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQY 227
+D PS D D T SRK+EVPN+KVGVLIGK GDTIRYLQY
Sbjct: 144 EDAEKPSLEDAGKPCAEKLSEEAEEHLSEDQTTSRKMEVPNDKVGVLIGKGGDTIRYLQY 203
Query: 228 NSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA 287
NSGAKIQITRDA+AD + TRPVE+IG+LS+I KAEKLINAVIAEADAGGSPSL+A GLA
Sbjct: 204 NSGAKIQITRDAEADLQSTTRPVELIGSLSSISKAEKLINAVIAEADAGGSPSLIAMGLA 263
Query: 288 T-AQASGAAEQVEIKVPNEK-------------VGLIIGRGGETIKGLQTRSGARIQLIP 333
T AQA+ +Q+EI +PNEK VGLIIGRGGETIKGLQ +SGARIQLIP
Sbjct: 264 TSAQAAEVGDQLEIPIPNEKLCFSTMLMQACIQVGLIIGRGGETIKGLQAKSGARIQLIP 323
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
QHLPEGD SKER VRVTGD RQIE A+EMI +V++Q
Sbjct: 324 QHLPEGDESKERTVRVTGDTRQIETAREMIMDVMNQ 359
>gi|357501817|ref|XP_003621197.1| hypothetical protein MTR_7g010340 [Medicago truncatula]
gi|355496212|gb|AES77415.1| hypothetical protein MTR_7g010340 [Medicago truncatula]
Length = 680
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 291/812 (35%), Positives = 367/812 (45%), Gaps = 229/812 (28%)
Query: 1 MAEEEVLAPASAAAADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGS 60
MAEEEV+ AA D KRK +D D+
Sbjct: 1 MAEEEVIV----AAPDCKRKFEDQHSDDG------------------------------- 25
Query: 61 EVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHSS 120
E KRP L DD + N N +E+K VV+ E E S E++ E
Sbjct: 26 ENKRPCLYDDNQ---NYLANTNIHQEKK---VVEPE---------ENAHSEEIQDE---- 66
Query: 121 VEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVP 180
S DN EET E +TKE+ V EE K E ++ S++ P
Sbjct: 67 -----SKDN-----SEETAE------------PTDTKEIHV--EEPSKSIEQLDSSSIDP 102
Query: 181 QQVVDNSK-SDDPSSTDDSTMSRKIEVPNNK----------VGVLIGKAG---------- 219
D S P S D+T +++IEVP+NK VG L+ G
Sbjct: 103 TFQHDASFGQKQPISGSDTTTTQEIEVPSNKAWIRVIGLNHVGFLLSILGFVYNQTRQCF 162
Query: 220 ----------DTIRYL-QYNSGAKIQITRDADADPHAATRPVE----IIGTLSNIDKAEK 264
D + + ++ + T D D A P E + L +IDKAEK
Sbjct: 163 FEEHDEFNLKDLLESIYEFENLMDAMFTEADDVDSPAREVPNEKEFNLNDFLESIDKAEK 222
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+NA+ AE D GGSP+LVARGL+ AQA ++Q++I+VPNEK
Sbjct: 223 LLNAMSAEDDDGGSPTLVARGLSPAQAIMGSDQIQIQVPNEK------------------ 264
Query: 325 SGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQA 384
LIPQHLP D SKER V+VTGD RQIEIAQEMIKE L+Q V+ S SG F+QQA
Sbjct: 265 ------LIPQHLP--DDSKERTVQVTGDKRQIEIAQEMIKETLNQPVKSS--SGVFSQQA 314
Query: 385 YR-PRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNY 443
YR P+ GPP W +GSH P +Y Y PYPS N Y PYGNY PQ MAPRS+Y
Sbjct: 315 YRPPQGSGGPPLWDQQGSHYGHPPSYYYQHHWPYPSHNQSYAPTPYGNY-PQHMAPRSSY 373
Query: 444 G------------GPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPA 491
G GPP+ GYD+YGGQ GH S+ S H +SIP H + P P+
Sbjct: 374 GSGWEQRPHQSLQGPPSHN---WGYDHYGGQRGHSSEVSSSAPHPSSIPQHCTGPYPLPS 430
Query: 492 GGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPVY 551
GP P Q NYNY +N AP Q+PYG HS Y
Sbjct: 431 IGPSPVQMNYNY----------------------------ENLAPAQYPYGRHS----TY 458
Query: 552 SQGGLQSGYH-QHQYGKPP-YGM-PAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYG- 607
Q Q+ + QYGKPP YG+ P+QG PQ+Y PR QPG+I PYQ P AQSYG
Sbjct: 459 PQAWAQANHAPPQQYGKPPLYGVPPSQGQHPQAYVHPRATQPGEI-PYQGSTP-AQSYGR 516
Query: 608 PNV----PHQQQYPYATSGPTQQT----YPSYGSAPA-----PDSYNQPPASAPGYPQQA 654
P + P Q Q+P + GP + T P +GS PA P Y PP+ +PQ
Sbjct: 517 PPLFGMPPSQGQHP-ESYGPPRATQPGEIPYHGSTPAQIYCRPPFYGMPPSQG-QHPQSY 574
Query: 655 GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGS 714
G P QPG + P G P +G+ +Y P+ ++ DP+Y S
Sbjct: 575 G--PPRATQPG--KIPYQGST-PAQSHGR----PPSYGVPPSQGQHPVLWRTPLDPAYNS 625
Query: 715 SAPGSAYAAPTGQPGYAQPAATQPSYDQSASQ 746
+ QP Y QP TQ Y Q+ Q
Sbjct: 626 GS--------QVQPCYVQPRPTQTCYYQANPQ 649
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 242/585 (41%), Positives = 307/585 (52%), Gaps = 78/585 (13%)
Query: 172 SVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGA 231
S PS+V Q+ + ++ S P S S+KI++PN +VGV+IGK G+TI+YLQ SGA
Sbjct: 109 SSAPSDVG-QKPMISTPSAIPVSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGA 167
Query: 232 KIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQA 291
KIQ+TRD DADP++ TR VE++GT I KAE+LIN V++EA+AGGS +V+R L T QA
Sbjct: 168 KIQVTRDMDADPNSPTRLVELMGTPDQIAKAEQLINDVLSEAEAGGS-GIVSRRL-TGQA 225
Query: 292 SGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+EQ +KVPN KVGLIIG+GGETIK +Q R+GARIQ+IP HLP GD S ER V++ G
Sbjct: 226 --GSEQFVMKVPNNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDG 283
Query: 352 DMRQIEIAQEMIKEVLSQT-VRPSTLSGGFNQQAYRPRVPTGPPQWG-PRGSHPSQPMAY 409
QIE A++++ EV+S+ +R ++GG+ QQ Y+ R P+G WG P G+ P Q Y
Sbjct: 284 TSEQIESAKQLVNEVISENRIRNPAMAGGYPQQGYQARPPSG---WGAPPGAPPMQQPGY 340
Query: 410 DYPQRGPYPSQNPHY--PHLPYGNYPPQQMAPRSNYGGPPNMQGAAG-GYDYYGGQGGHV 466
Y Q G YP +P Y Y Y PP+ Q G GYDYY G
Sbjct: 341 SYAQPGSYPGPSPQYNMSQPAYAGYSQPNATGWDQTAAPPSQQTTPGSGYDYY----GQQ 396
Query: 467 SDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGY 526
+ +H G PS PA + YNY QP S Y Q PQ GY
Sbjct: 397 QTQQQQQAH-----GGPSGPA---------DNSGYNYNQPPASGYNQQ---GQGYPQDGY 439
Query: 527 GHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYHQHQ-YGKPPYGMPAQGTQPQSYGPP 585
G GY HAP P G P Y Q Q GY+ YG P Q SYG
Sbjct: 440 GGGY---HAPAPQPGYGQPQPIPGYDQ---QQGYNSATGYGN--VANPTQEGHTTSYG-- 489
Query: 586 RPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGS-APAPDSYNQPP 644
G+ G PP S P+ QQ Y P+ +YP GS PA Y PP
Sbjct: 490 AQGETGQAPP---------SVQPSAIGQQGYNTQQPSPSPASYPPQGSNQPA---YGMPP 537
Query: 645 ASAPGY----PQQAGQAVPNYPQPGGQQAPS----YGQV--APTA--GYGQYTNTQQAYP 692
S G+ P Q+G NY P Q+AP+ YGQ +P+A GY Q Q YP
Sbjct: 538 TSQTGFGSQPPAQSGYTT-NYGPPQAQKAPANPPVYGQTQQSPSAQGGYAQPAPVQPGYP 596
Query: 693 --EQPATSNAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAA 735
+QP + GY T D S +AP S+Y GQPGY P+A
Sbjct: 597 HSQQPPAQS---GYAQT-DSSSQRAAP-SSYGTAAGQPGYGGPSA 636
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 219/541 (40%), Positives = 271/541 (50%), Gaps = 71/541 (13%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S+KIE+PN +VGV+IGKAG+TIRY+Q SGAKIQ+TRD +A+P A TRPVE+ G I
Sbjct: 143 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELSGNPDQI 202
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
KAE+LI V+AEADAG S R Q G E ++K+ N KVGL+IG+GGETIK
Sbjct: 203 SKAEQLIKEVLAEADAGSSGGGSGRKYNAPQPGG--ETFQMKIANNKVGLVIGKGGETIK 260
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+Q ++GARIQ+IP HLP GD S ER V + G QIE A++++ EV S+ + +SGG
Sbjct: 261 SMQQKTGARIQVIPLHLPAGDTSTERTVHIDGTPEQIESAKQLVIEVTSENRARNPMSGG 320
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQM 437
++QQ YRP P WGP + P QP Y Y Q G YP P Y P PYG+YPP
Sbjct: 321 YSQQGYRPPRPQS--NWGPPSAPPQQP-GYGYMQPGAYPGAPPQYGAPQQPYGSYPPTSG 377
Query: 438 APRSNYGGPPNMQG----AAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGG 493
++ + N Q GYDYY S S P A +
Sbjct: 378 GYQTGWDQSQNQQSHTTPPGTGYDYY--------------SQQQQPQQQQSAPGTAAS-- 421
Query: 494 PPPSQANYNYGQPHT-SEYGHQQPYA-HAAPQQGYGH-GYDDNHAPVQHPYGGHSNSQPV 550
+YNYGQP T + G+ Y + QQ YGH GY Q
Sbjct: 422 --TDATSYNYGQPSTYASQGYDSTYTQQSGGQQAYGHDGYSGYQTQGQQ----------- 468
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQ---PQSYGPPRPGQPGDIPPYQSQVPSAQSYG 607
Q+GY Q YG YG A TQ SYG P G P QS P+A
Sbjct: 469 -QGYSQQTGYDQQGYGASAYGSAANSTQDGSAASYGGPG-GASQASPGQQSSTPAASH-- 524
Query: 608 PNVPHQQQYPYATSGPTQQTYPS-YGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGG 666
P Q A S PTQ + PS YG+ P Y P PGY GQ P P G
Sbjct: 525 PGYASQPPTSAAASYPTQGSAPSGYGAPPPQSGYGTQP---PGY----GQGAYGQPSPQG 577
Query: 667 QQAPS---YGQVAP----TAGYGQYTNTQ------QAYPEQPATSNAGYGYQGTQDPSYG 713
Q+ P+ YGQ P GYGQY +Q AYP P +S+ GYG Q + +YG
Sbjct: 578 QKPPASSPYGQAPPPGSAQGGYGQYGYSQPAYGAPPAYPGAPHSSHPGYGQQQSYGDAYG 637
Query: 714 S 714
S
Sbjct: 638 S 638
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 223/550 (40%), Positives = 276/550 (50%), Gaps = 78/550 (14%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S+KIE+PN +VGV+IGKAG+TIRY+Q SGAKIQ+TRD +A+P A TR VE+ G I
Sbjct: 142 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGNPEQI 201
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
KAE+LI VIAEADAG S V+ G AE ++K+ N KVGLIIG+GGETIK
Sbjct: 202 SKAEQLIKEVIAEADAGSS-GAVSGGRKYNAPQPGAETFQMKIANNKVGLIIGKGGETIK 260
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+Q +SGARIQ+IP HLP GD S ER V + G QIE A++++ EV S+ + +SGG
Sbjct: 261 SMQAKSGARIQVIPLHLPAGDTSTERTVHIDGTQEQIEHAKQLVAEVTSENRARNPMSGG 320
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQM 437
++QQ Y P P WGP S P Q Y Y Q G YP P Y P PYG+YPP
Sbjct: 321 YSQQGYHPPRPQS--NWGPP-SAPPQQSGYGYMQPGAYPGAPPQYGAPQQPYGSYPPTSG 377
Query: 438 APRSNYGGPPNMQGA----AGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGG 493
++ + N Q GYDYY S S P A +
Sbjct: 378 GYQTGWDQSQNQQSHTTPPGTGYDYY--------------SQQQQPQQQQSAPGTAAS-- 421
Query: 494 PPPSQANYNYGQPHT-SEYGHQQPYA-HAAPQQGYGH-GYDDNHAPVQHPYGGHSNSQPV 550
+YNYGQP T + G+ Y H+ QQ YGH GY Q
Sbjct: 422 --TDATSYNYGQPSTYASQGYDSTYTQHSGGQQAYGHDGYSGYQTQGQQ----------- 468
Query: 551 YSQGGLQSGYHQHQYGKPPYGMPAQGTQP-QSYGPPRPGQPGDIPPYQSQVPSAQSYGPN 609
Q+GY Q YG YG A TQ SYG P G P Q+ P+A S+ P
Sbjct: 469 -QGYSQQTGYDQQGYGASAYGSAANSTQDGSSYGGPG-GATQASPGQQTSTPAAGSH-PG 525
Query: 610 VPHQQQYPYATSGPTQ--QTYPSYGSAPAPDSYNQPPASAPGY----PQQAGQAVPNY-- 661
YA+ PT +YP GSAP+ Y PP PGY PQQ G Y
Sbjct: 526 --------YASQPPTSAAASYPVQGSAPS--GYGAPPPQ-PGYGTQPPQQGGYGPGAYGQ 574
Query: 662 PQPGGQQAPS---YGQVAP----TAGYGQYTNTQ------QAYPEQPATSNAGYGYQGTQ 708
P P G++ P+ YGQ P GY QY +Q AYP P S+ GYG Q +
Sbjct: 575 PSPHGEKPPASSPYGQAPPPGSAQGGYVQYGYSQPAYGAPPAYPGAPTASHPGYGQQQSY 634
Query: 709 DPSYGSSAPG 718
+YGS + G
Sbjct: 635 GDAYGSGSYG 644
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 214/368 (58%), Gaps = 51/368 (13%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KIE+PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ TR VE++GT I
Sbjct: 136 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 195
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LIN V++EA++GGS +V+R L S EQ +K+PN KVGL+IG+GGETIK
Sbjct: 196 KAEQLINDVLSEAESGGS-GIVSRRLTGPSGS---EQFVMKIPNNKVGLVIGKGGETIKS 251
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT-VRPSTLSGG 379
+Q R+GARIQ+IP HLP GD S ER +++ G QIE A++++ EV+S+ R S +SGG
Sbjct: 252 MQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISENRARNSGMSGG 311
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPY--PSQNPHYPHLPYGNYP-PQQ 436
+NQQ Y+ R P+ WGP G+ P Q Y Y Q+G Y PS + PY Y P
Sbjct: 312 YNQQGYQARPPS---SWGPPGAPPMQQPNYGYGQQGGYSAPSSQYNISQPPYQGYSQPAS 368
Query: 437 MAPRSNYGG---PPNMQGAAG-GYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAG 492
SN+ PPN G GYDYYG Q AG
Sbjct: 369 GGYASNWDQSTVPPNQPATQGSGYDYYGQQAPQQQQT---------------------AG 407
Query: 493 GPPPSQAN--YNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPV 550
GP + N Y+YGQP + Y +QQ Y+ Q GYG Y HAP Q YG P
Sbjct: 408 GPGATGDNSGYSYGQPPATTY-NQQGYS----QDGYGGNY---HAP-QSGYG----QPPT 454
Query: 551 YSQGGLQS 558
Y Q G S
Sbjct: 455 YDQQGYSS 462
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/317 (43%), Positives = 186/317 (58%), Gaps = 21/317 (6%)
Query: 132 ISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDD 191
I + T + S+ V E + EE V +V + +PQQ ++ S
Sbjct: 25 ILITALTGFICRSSRSFCHPVCGCKPEAQMGSEEWVM---AVCRTIWLPQQFIEGHGSAI 81
Query: 192 PS-STDDST-----------MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
PS S+ ST S+ IE+PN +VGV+IGK+G+TI+ LQ SGAKIQ+TRD
Sbjct: 82 PSLSSHGSTPQYSSYGGYQGTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDL 141
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE 299
DA P + TRPVE+ GT I +AE+LIN V+AEADA S +L +R Q A+Q +
Sbjct: 142 DALPGSQTRPVELSGTPDQISRAEQLINEVLAEADAASSGNLSSRKYNAPQP--GADQFQ 199
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
+K+ N KVGL+IG+GGETIK +Q +SGARIQ++P HLP GD + ER V + G QIE A
Sbjct: 200 MKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIETA 259
Query: 360 QEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPS 419
++++ EV S+ + +SGG++QQ YRP P WGP G P Q Y Y Q G YP
Sbjct: 260 KQLVIEVTSENRARNPMSGGYSQQGYRPPRPQS--NWGPHGGAPMQQPGYGYMQPGAYPG 317
Query: 420 QNPHY--PHLPYGNYPP 434
P Y P PYG+YPP
Sbjct: 318 APPQYGAPQQPYGSYPP 334
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 203/352 (57%), Gaps = 33/352 (9%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KI++PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ TR VE++GT I
Sbjct: 137 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 196
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LIN V++EA+AGGS +V+R L T QA +EQ +KVPN KVGLIIG+GGETIK
Sbjct: 197 KAEQLINDVLSEAEAGGS-GIVSRRL-TGQA--GSEQFVMKVPNNKVGLIIGKGGETIKN 252
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT-VRPSTLSGG 379
+Q R+GARIQ+IP HLP GD S ER V++ G QIE A++++ EV+S+ +R ++GG
Sbjct: 253 MQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENRIRNPAMAGG 312
Query: 380 FNQQAYRPRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQ 436
+ QQ Y+ R P+G WG P G+ P Q Y Y Q G YP +P Y Y Y
Sbjct: 313 YPQQGYQARPPSG---WGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQPAYAGYSQPN 369
Query: 437 MAPRSNYGGPPNMQGAAG-GYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPP 495
PP+ Q G GYDYY G + +H G PS PA
Sbjct: 370 ATGWDQTAAPPSQQTTPGSGYDYY----GQQQTQQQQQAH-----GGPSGPAD------- 413
Query: 496 PSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNS 547
+ YNY QP S Y Q GY + P Q GH+ S
Sbjct: 414 --NSGYNYNQPPASGYNQQGQGYDQQQGYNSATGYGNVANPTQE---GHTTS 460
>gi|124360408|gb|ABN08421.1| nucleic acid binding , related [Medicago truncatula]
Length = 465
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 198/454 (43%), Positives = 240/454 (52%), Gaps = 101/454 (22%)
Query: 226 QYNSGAKIQITRDADADPHAATRPVE----IIGTLSNIDKAEKLINAVIAEADAGGSPSL 281
++ + T D D A P E + L +IDKAEKL+NA+ AE D GGSP+L
Sbjct: 27 EFENLMDAMFTEADDVDSPAREVPNEKEFNLNDFLESIDKAEKLLNAMSAEDDDGGSPTL 86
Query: 282 VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
VARGL+ AQA ++Q++I+VPNEK LIPQHLP D
Sbjct: 87 VARGLSPAQAIMGSDQIQIQVPNEK------------------------LIPQHLP--DD 120
Query: 342 SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYR-PRVPTGPPQWGPRG 400
SKER V+VTGD RQIEIAQEMIKE L+Q V+ S SG F+QQAYR P+ GPP W +G
Sbjct: 121 SKERTVQVTGDKRQIEIAQEMIKETLNQPVKSS--SGVFSQQAYRPPQGSGGPPLWDQQG 178
Query: 401 SHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG------------GPPN 448
SH P +Y Y PYPS N Y PYGNY PQ MAPRS+YG GPP+
Sbjct: 179 SHYGHPPSYYYQHHWPYPSHNQSYAPTPYGNY-PQHMAPRSSYGSGWEQRPHQSLQGPPS 237
Query: 449 MQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYNYGQPHT 508
GYD+YGGQ GH S+ S H +SIP H + P P+ GP P Q NYNY
Sbjct: 238 HN---WGYDHYGGQRGHSSEVSSSAPHPSSIPQHCTGPYPLPSIGPSPVQMNYNY----- 289
Query: 509 SEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPVYSQGGLQSGYH-QHQYGK 567
+N AP Q+PYG HS Y Q Q+ + QYGK
Sbjct: 290 -----------------------ENLAPAQYPYGRHS----TYPQAWAQANHAPPQQYGK 322
Query: 568 PP-YGM-PAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYG-PNV----PHQQQYPYAT 620
PP YG+ P+QG PQ+Y PR QPG+I PYQ P AQSYG P + P Q Q+P +
Sbjct: 323 PPLYGVPPSQGQHPQAYVHPRATQPGEI-PYQGSTP-AQSYGRPPLFGMPPSQGQHP-ES 379
Query: 621 SGPTQQT----YPSYGSAPA-----PDSYNQPPA 645
GP + T P +GS PA P Y PP+
Sbjct: 380 YGPPRATQPGEIPYHGSTPAQIYCRPPFYGMPPS 413
>gi|9665104|gb|AAF97295.1|AC010164_17 Hypothetical protein [Arabidopsis thaliana]
Length = 389
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 242/400 (60%), Gaps = 58/400 (14%)
Query: 1 MAEEEVLAPASAAAADLKRKLDDLEPDEALE--HAEGMRDDEAKNSDEVEKNVDGFAEAH 58
MAEEEV+A +D KRKL++LE E LE HA + +D + + D KN + +
Sbjct: 1 MAEEEVIA-IPVQPSDHKRKLENLES-EILEQQHAGSIDNDVSVDDD---KNASDYCQP- 54
Query: 59 GSEVKRPRLDDDKTEKPDGPVNVNGLKE------------EKP----DEVVDAEQLTEDT 102
KRP+LDD E DG + + G E EKP DE D L E
Sbjct: 55 ----KRPKLDD---EAVDG-LGIGGTVENSGDVESKEEGTEKPIAQSDENQDGNPLIEKV 106
Query: 103 TKEEELESAEVKTEQHSSVEEQAS-VDNQQISVKEETKEVLFSTEEAFIDVKEETKEVT- 160
+ + E ++ K E + S E S N+ +ET +V+ E V+ +KEVT
Sbjct: 107 QETIDAEESDNKMEDNESKEVNISGSQNEGEDDSKETNDVVAQKE-----VENGSKEVTD 161
Query: 161 ---VKEEETVKEEESVEPSNVVP-QQVVDNSKSDDPSST----DDS-TMSRKIEVPNNKV 211
KE+E ES E + V ++ D SK + ST DD+ + +R+I+VP++KV
Sbjct: 162 CDSQKEDEANAGGESKEVNGSVSHDEIGDESKEVNGGSTHKEVDDTQSTTRRIDVPSSKV 221
Query: 212 GVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIA 271
G LIGK G+ +RYLQ NSGAKIQI RDA+ADP +A RPVEIIGT+S I+KAEKLINAVIA
Sbjct: 222 GTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKAEKLINAVIA 281
Query: 272 EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQL 331
E +AGG P+L ARG+ EQ+EIKVP++KVG+IIGRGGETIK +QT+S ARIQL
Sbjct: 282 EVEAGGVPALAARGV--------PEQMEIKVPSDKVGVIIGRGGETIKNMQTKSRARIQL 333
Query: 332 IPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
IPQ+ EGD SKER VR++GD RQI+IA +IK+V+ Q
Sbjct: 334 IPQN--EGDASKERTVRISGDKRQIDIATALIKDVMYQVC 371
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 199/351 (56%), Gaps = 50/351 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KI++PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ATR VE++G+ I
Sbjct: 125 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIA 184
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
AEKLIN V+AEA+ GGS +VAR +A +G+ E V K+PN KVGL+IG+GGETIK
Sbjct: 185 TAEKLINEVLAEAETGGS-GIVARRVAG--QAGSDEYVS-KIPNNKVGLVIGKGGETIKN 240
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPSTLSG 378
+Q +GARIQ+IP HLP GD S ER +++ G QIE A++M+ +V+S R ++SG
Sbjct: 241 MQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIESAKQMVNQVISGENRQRNPSMSG 300
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQ 436
G++QQ Y+ R PT WGP + P Q Y Y Q G Y S P Y P PY YPPQ
Sbjct: 301 GYSQQGYQARPPT---SWGPPAA-PMQQSGYGYVQPGAY-SGPPQYNVPQQPYAGYPPQS 355
Query: 437 ----MAPRSNYGGPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAG 492
A + P Q A GYDYY S P
Sbjct: 356 SGGYSAANWDQSTAPQQQSAHAGYDYY------------SQQQQQQNP------------ 391
Query: 493 GPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGH-GYDDNHAPVQHPYG 542
PP YNY QP +S Y P QGY GY HAP Q YG
Sbjct: 392 APPSDGTAYNYSQPPSSGYSQ--------PGQGYAQDGYGGYHAPPQSGYG 434
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 158/237 (66%), Gaps = 6/237 (2%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S+ IE+PN +VGV+IGK+G+TI+ LQ SGAKIQ+TRD DA P + TRPVE+ GT I
Sbjct: 118 TSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQI 177
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+AE+LIN V+AEADA S +L +R Q A+Q ++K+ N KVGL+IG+GGETIK
Sbjct: 178 SRAEQLINEVLAEADAASSGNLSSRKYNAPQP--GADQFQMKIANNKVGLVIGKGGETIK 235
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+Q +SGARIQ++P HLP GD + ER V + G QIE A++++ EV S+ + +SGG
Sbjct: 236 SMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIETAKQLVIEVTSENRARNPMSGG 295
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPP 434
++QQ YRP P WGP G P Q Y Y Q G YP P Y P PYG+YPP
Sbjct: 296 YSQQGYRPPRPQS--NWGPHGGAPMQQPGYGYMQPGAYPGAPPQYGAPQQPYGSYPP 350
>gi|226506792|ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea mays]
gi|219886335|gb|ACL53542.1| unknown [Zea mays]
gi|413926084|gb|AFW66016.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 692
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 213/531 (40%), Positives = 260/531 (48%), Gaps = 91/531 (17%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S+KIE+PN +VGV+IGKAG+TIRY+Q SGAKIQ+TRD +A+P A TR VE+ G I
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
KAE+LI V+AEADAG S + A GA E ++K+ N KVGLIIG+GGETIK
Sbjct: 199 SKAEQLIKEVLAEADAGSSGAGSGGRKYNATQPGA-ETFQMKIANNKVGLIIGKGGETIK 257
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+Q SGARIQ+IP HLP GD S ER V + G QIE A+++I EV S+ + +SGG
Sbjct: 258 SMQANSGARIQVIPLHLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSENRARNPMSGG 317
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQM 437
++QQ YRP P WGP P QP Y Y Q G YP P Y P PYG+YPP
Sbjct: 318 YSQQGYRPPRPQS--NWGPPSVPPQQP-GYGYMQPGAYPGAPPQYGAPQQPYGSYPPTSG 374
Query: 438 APRSNYGGPPNMQG----AAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAGG 493
++ + N Q GYDYY Q + ST
Sbjct: 375 GYQTGWDQSQNQQSHTTPPGTGYDYYSQQQQPQQQSAPGTAASTDA-------------- 420
Query: 494 PPPSQANYNYGQPHT-SEYGHQQPYA-HAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPVY 551
+YNYGQP T + G+ Y + QQ YGH D + Q Y
Sbjct: 421 -----TSYNYGQPSTYASQGYDSTYTQQSGGQQAYGH--DGYTGYQTQGQQQGYSQQTGY 473
Query: 552 SQGGLQSGYHQHQYGKPPYGMPAQGTQPQS-YGPP------RPGQ------PGDIPPYQS 598
Q G YG YG A TQ S YG P PGQ G P Y S
Sbjct: 474 DQQG---------YGTSAYGSAASSTQDGSNYGGPGGASQASPGQQTSNPAAGSQPGYTS 524
Query: 599 QVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY----PQQA 654
Q P++ + TYP GSAP+ Y PP+ + GY PQQA
Sbjct: 525 QPPTSAA--------------------ATYPPQGSAPS--GYGAPPSQS-GYGTQPPQQA 561
Query: 655 --GQAVPNYPQPGGQQAPS---YGQVAP----TAGYGQYTNTQQAYPEQPA 696
GQ P P GQ+ P+ YGQ P AGYGQY +Q AY PA
Sbjct: 562 GYGQGAYGQPSPQGQKPPALSPYGQAPPPGSAQAGYGQYGYSQPAYGAPPA 612
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 207/517 (40%), Positives = 256/517 (49%), Gaps = 63/517 (12%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KIE+PN +VGVLIGK G+TI+YLQ SGAKIQ+TRD DADP++ TR VE++GT +
Sbjct: 87 SKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVS 146
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
AEKLIN V+AEA+AG S R +A SG E V +++PN KVGLIIG+GGETIKG
Sbjct: 147 SAEKLINEVLAEAEAGASVGGTRRMVAQ---SGGDEFV-MQIPNNKVGLIIGKGGETIKG 202
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPSTLSG 378
+Q +GARIQ+IP H P GD S ER +++ G QIE A++++ ++L+ +R S SG
Sbjct: 203 MQASTGARIQVIPLHPPPGDTSTERTLKIDGTPDQIESAKQLVNQILTGENRLRNSGNSG 262
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQ 436
G+ QQ Y+ R P+ W P + P Q Y Y Q G Y +P Y P PY YPPQQ
Sbjct: 263 GYTQQGYQSRPPS---SWAPPAA-PVQQAGYGYGQPGSYSGPSPQYNTPQPPYTGYPPQQ 318
Query: 437 ----MAPRSNYGGPPNMQGA-AGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPA 491
A P + Q A GYDYY + S G +Q P+
Sbjct: 319 PGGYSANWDQSTAPSHQQSTHASGYDYY---NQQPQQQQNPGGPSQPADGSAYSYSQPPS 375
Query: 492 GGPPPSQANYNYGQPHTSEYGHQQPYAHAAP-----QQGYGHG--YDDNHAPVQHPYGGH 544
G SQ YGQ Y QQ + P QQGYG Y P Q + +
Sbjct: 376 SG--YSQPGQGYGQESYGAYNAQQQSGYGQPQTYDQQQGYGSAPSYGSGSNPTQEGHTSN 433
Query: 545 SNSQPVYSQGG-----LQSGYHQHQYGKP-------PYGMPAQGTQPQS-----YGPPRP 587
SQ SQ Q GY +Q G P P G+QPQS YG P
Sbjct: 434 YGSQADTSQTSQPTTVAQQGYATNQQGTPQPGYAVAPTSQATYGSQPQSGYGTGYGAPP- 492
Query: 588 GQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASA 647
SQ PSA P V Q Q P +G Q YPS S P Y QP
Sbjct: 493 ----------SQKPSAN---PPVYGQSQSPSTAAGYGQSAYPS--SQAPPSGYAQPELGT 537
Query: 648 PGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQY 684
P Q G +Y P G Q PSYGQ + G Y
Sbjct: 538 QRAPVQPGYGPQSYGAPQGGQ-PSYGQTPASYGNSSY 573
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 231/579 (39%), Positives = 286/579 (49%), Gaps = 100/579 (17%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KI++PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ATR VE++G+ I
Sbjct: 123 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIA 182
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
AEKLIN V+AEA+ GGS ++AR +A QA G+ E V K+PN KVGL+IG+GGETIK
Sbjct: 183 TAEKLINEVLAEAETGGS-GIIARRVA-GQA-GSDEYVS-KIPNNKVGLVIGKGGETIKN 238
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPSTLSG 378
+Q +GARIQ+IP HLP GD S ER +++ G QIE A++M+ +V+S R +SG
Sbjct: 239 MQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIESAKQMVNQVISGENRHRNPAMSG 298
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQ 436
G++QQ Y+ R PT WGP + P Q Y Y Q G Y S P Y P Y YPPQ
Sbjct: 299 GYSQQGYQARPPT---SWGPPAA-PMQQSGYGYVQPGAY-SGPPQYNMPQQQYAGYPPQS 353
Query: 437 ----MAPRSNYGGPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAG 492
A + P Q GYDYY P S T+
Sbjct: 354 SGGYSATNWDQSTAPQQQSTHAGYDYY---SQQQQQNPAPSSDGTA-------------- 396
Query: 493 GPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGH-GYDDNHAPVQHPYGGHSNSQPVY 551
YNY QP +S Y P QGY GY HAP Q YG P Y
Sbjct: 397 --------YNYSQPPSSGYNQ--------PGQGYAQDGYGGYHAPPQLGYG----QPPSY 436
Query: 552 SQGGLQSGYHQHQYGKPPYGM-PAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNV 610
Q Q GY P YG PAQ +YG G PP Q P +Q YG +
Sbjct: 437 DQ---QQGYSS----APSYGSNPAQEGHTANYG--SQGDSTQAPPAQ---PPSQGYGTS- 483
Query: 611 PHQQQYPYATSGPTQQTYPSYGSAPA--PDSY-NQPPASAPGYPQQAGQAVPNYPQPGGQ 667
QQ P A + P Q P YG P P +Y +QPPA + GY +G P +P G
Sbjct: 484 --QQPSPNAANYPP-QAQPGYGVPPTSQPAAYGSQPPAQS-GY--GSGYGPPQTQKPSG- 536
Query: 668 QAPSYGQVAP---TAGYGQYTNTQQ-------------AYPEQPATSNAGYGYQGTQDPS 711
P YGQ GYGQ + Q A PE + GY G P
Sbjct: 537 TPPVYGQSQSPNTAGGYGQSGHLQSGYPPSQPPPSGGYAQPESGSQKAPPSGYGGAVQPG 596
Query: 712 YGSSAPGSAYAAPTGQPGYAQPAATQPSYDQSASQSTAY 750
YG + G A GQPGY Q PSY S+ + Y
Sbjct: 597 YGPPSYGGVPAG--GQPGYGQ---APPSYSNSSYGAGGY 630
>gi|223947067|gb|ACN27617.1| unknown [Zea mays]
gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 704
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 214/543 (39%), Positives = 261/543 (48%), Gaps = 103/543 (18%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S+KIE+PN +VGV+IGKAG+TIRY+Q SGAKIQ+TRD +A+P A TR VE+ G I
Sbjct: 139 TSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQI 198
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
KAE+LI V+AEADAG S + A G AE ++K+ N KVGLIIG+GGETIK
Sbjct: 199 SKAEQLIKEVLAEADAGSSGAGSGGRKYNATQPG-AETFQMKIANNKVGLIIGKGGETIK 257
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST---- 375
+Q SGARIQ+IP HLP GD S ER V + G QIE A+++I EV S+ R +
Sbjct: 258 SMQANSGARIQVIPLHLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSELARRTANYPG 317
Query: 376 --------LSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--P 425
+SGG++QQ YRP P WGP P QP Y Y Q G YP P Y P
Sbjct: 318 EQNRARNPMSGGYSQQGYRPPRPQS--NWGPPSVPPQQP-GYGYMQPGAYPGAPPQYGAP 374
Query: 426 HLPYGNYPPQQMAPRSNYGGPPNMQG----AAGGYDYYGGQGGHVSDRPVSVSHSTSIPG 481
PYG+YPP ++ + N Q GYDYY Q + ST
Sbjct: 375 QQPYGSYPPTSGGYQTGWDQSQNQQSHTTPPGTGYDYYSQQQQPQQQSAPGTAASTDA-- 432
Query: 482 HPSVPAQAPAGGPPPSQANYNYGQPHT-SEYGHQQPYA-HAAPQQGYGHGYDDNHAPVQH 539
+YNYGQP T + G+ Y + QQ YGH D
Sbjct: 433 -----------------TSYNYGQPSTYASQGYDSTYTQQSGGQQAYGH--DGYTGYQTQ 473
Query: 540 PYGGHSNSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQS-YGPP------RPGQ--- 589
+ Q Y Q G YG YG A TQ S YG P PGQ
Sbjct: 474 GQQQGYSQQTGYDQQG---------YGTSAYGSAASSTQDGSNYGGPGGASQASPGQQTS 524
Query: 590 ---PGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPAS 646
G P Y SQ P++ + TYP GSAP+ Y PP+
Sbjct: 525 NPAAGSQPGYTSQPPTSAA--------------------ATYPPQGSAPS--GYGAPPSQ 562
Query: 647 APGY----PQQA--GQAVPNYPQPGGQQAPS---YGQVAP----TAGYGQYTNTQQAYPE 693
+ GY PQQA GQ P P GQ+ P+ YGQ P AGYGQY +Q AY
Sbjct: 563 S-GYGTQPPQQAGYGQGAYGQPSPQGQKPPALSPYGQAPPPGSAQAGYGQYGYSQPAYGA 621
Query: 694 QPA 696
PA
Sbjct: 622 PPA 624
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 208/530 (39%), Positives = 260/530 (49%), Gaps = 58/530 (10%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KIE+PN +VGVLIGK G+TI+YLQ SGAKIQ+TRD DADP++ TR VE++GT +
Sbjct: 87 SKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVS 146
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
AEKLIN V+AEA+AG S R +A SG E V +++PN KVGLIIG+GGETIK
Sbjct: 147 SAEKLINEVLAEAEAGASGGGTRRMVAQ---SGGDEFV-MQIPNNKVGLIIGKGGETIKS 202
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPSTLSG 378
+Q +GARIQ+IP H P GD S ER +++ G QIE A++++ ++L+ +R S SG
Sbjct: 203 MQASTGARIQVIPLHPPPGDTSTERTLKIDGTPDQIESAKQLVNQILTGENRLRNSGNSG 262
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNYPPQQ 436
G+ QQ Y+ R P+ P Q Y Y Q G Y +P Y P PY YPPQQ
Sbjct: 263 GYTQQGYQSRPPSSWAP----PPAPVQQAGYGYGQPGSYSGPSPQYNMPQPPYAGYPPQQ 318
Query: 437 ----MAPRSNYGGPPNMQGA-AGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPA 491
A P + Q A GYDYY Q + + G +Q P+
Sbjct: 319 PGGYSANWDQSTAPSHQQSTHASGYDYYNQQPQQQQNPGGPPQPA---DGSGYSYSQPPS 375
Query: 492 GGPPPSQANYNYGQPHTSEYGHQQPYAHAAP-----QQGYGHG--YDDNHAPVQHPYGGH 544
G SQ YGQ Y QQ + P QQGYG Y P Q + +
Sbjct: 376 SG--YSQPGQGYGQESYGAYNAQQQSGYGQPQTYDQQQGYGSAPSYGSGSNPTQEGHTSN 433
Query: 545 SNSQPVYSQGG-----LQSGYHQHQ-------YGKPPYGMPAQGTQPQS-YGPPRPGQPG 591
SQ SQ Q GY +Q Y P A G+QPQS YGP P
Sbjct: 434 YGSQADTSQTSQPTTVAQQGYATNQPETPQPGYAVAPTTQAAYGSQPQSGYGPSYGAPP- 492
Query: 592 DIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGYP 651
SQ PSA P V Q Q P G YPS S P Y QP P
Sbjct: 493 ------SQKPSAN---PPVYGQSQSPSTAGGYGHSAYPS--SQAPPSGYAQPELGTQRAP 541
Query: 652 QQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG 701
Q G +Y P G Q P YGQ P+ G Y + Y + PA ++ G
Sbjct: 542 VQPGYGPQSYGAPQGGQ-PGYGQTPPSYGNSSYGGS---YAQAPAYASDG 587
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/254 (50%), Positives = 168/254 (66%), Gaps = 13/254 (5%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S S P S S+KI++PN +VGV+IGK G+TI+YLQ SGAKIQITRD DADP+++
Sbjct: 71 SASPPPVSYGHQGSSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSS 130
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEK 306
TR VE++GT I AEKLIN V+AEA++GGS +V R T QA +++ +K+PN K
Sbjct: 131 TRTVELMGTPEAISSAEKLINEVLAEAESGGS-GIVTRRF-TGQA--GSDEFVMKIPNNK 186
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VGLIIG+GGETIK +Q +GARIQ+IP HLP GD S ER +++ G QIE A++++ +V
Sbjct: 187 VGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIDGTPEQIESAKQLVYQV 246
Query: 367 LS--QTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY 424
+S VR +SGG+ QQ Y+ R P+ W P P+Q Y Y Q G Y +P Y
Sbjct: 247 ISGENRVRNPAMSGGYPQQGYQSRPPS---NWAP--PAPTQQPGYGYVQPGAYSGPSPQY 301
Query: 425 --PHLPYGNYPPQQ 436
P PY YPPQQ
Sbjct: 302 NMPQQPYAGYPPQQ 315
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 159/236 (67%), Gaps = 5/236 (2%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+ ++KI++PN +VGV+IGK+G+TI++LQ SGAKIQ+TRD D P + TR V++ GT
Sbjct: 142 STTKKIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTPEQ 201
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I +AE+LI V+AEADAG S ++ R Q AEQ ++++ N KVGL+IG+GGETI
Sbjct: 202 ISRAEELIRDVLAEADAGSSGTVSNRKYNAPQP--GAEQFQMQIANNKVGLVIGKGGETI 259
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K +Q +SGARIQ+IP HLP GD S ER + + G QIEIA++++ EV S+ + +SG
Sbjct: 260 KSMQAKSGARIQVIPLHLPPGDTSTERTLYIDGTTDQIEIAKQLVAEVTSENRARNPMSG 319
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPP 434
G++QQ YRP P G WG G+ P+Q Y Y Q G YP P Y PYG YPP
Sbjct: 320 GYSQQGYRPPRPQG--NWG-AGAPPTQQPGYGYMQPGAYPGAPPQYGQPPYGGYPP 372
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 278/595 (46%), Gaps = 112/595 (18%)
Query: 149 FIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTM-------- 200
F +K+ ++V + + PS+VV + DN PS D S +
Sbjct: 51 FELIKQRAQQVAAR-----LLSGAAAPSDVVKRTKFDNGP---PSPYDSSDLKSQYAAPM 102
Query: 201 ----------SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
S+KIE+PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ R V
Sbjct: 103 SIPSYSHQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLV 162
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
E+ GT I AEKLI V+AEA++GG+ LV R + G A++ +K+PN KVGLI
Sbjct: 163 ELTGTSDAIATAEKLIKEVLAEAESGGN-GLVTRRMT---GQGGADEFSMKIPNNKVGLI 218
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS-- 368
IG+GGETIK +Q +GARIQ+IP HLP GD S ER +++ G QIE A++++ +LS
Sbjct: 219 IGKGGETIKSMQATTGARIQVIPLHLPPGDTSTERTLKIEGTSEQIESAKQLVDSILSGE 278
Query: 369 QTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHY--PH 426
+R ++SGG++QQ Y+ R P+ W P + SQ Y Y Q G YP P Y P
Sbjct: 279 NRLRNPSMSGGYSQQGYQARPPS---SWAPPAA--SQQPGYGYAQPGAYPGPTPQYNVPQ 333
Query: 427 LPYGNYPPQQMAPRSNYGGPPNMQGAAGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVP 486
Y YPP +AGGY Q + + ++ +
Sbjct: 334 QAYAGYPPH----------------SAGGYSTNWDQSTATTQQSTYDYYNQQPQQPQNPG 377
Query: 487 AQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGH-GYDDNHAPVQHPYGGHS 545
AP P YNY QP ++ Y P QGY GY P Q Y
Sbjct: 378 GPAP----PADGTAYNYSQPPSAGYNQ--------PGQGYSQDGYGAYQQPPQSGY---- 421
Query: 546 NSQPVYSQGGLQSGYHQHQYGKPPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQS 605
+QP + Y Q Q YG +G +YG G +PP Q PS Q
Sbjct: 422 -AQP--------TSYDQQQ----GYGSAQEGQTTTNYGSQGQGDATQVPPVQ---PSQQG 465
Query: 606 YGPN---VPHQQQYPYATSG-------PTQQTYPSYGSAP------APDSYNQPPASAPG 649
YG + P+ +YP + PT QT +YGS P P +P + P
Sbjct: 466 YGSSQQPSPNAAKYPPQGAAQPSYGVPPTSQT--AYGSQPQTQSGYGPPQTQKPSGTPPA 523
Query: 650 YPQ-QAGQAVPNY--PQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG 701
Y Q Q+ A Y P P G P YGQ + G Y YP+ PA S G
Sbjct: 524 YGQSQSPNAAGGYGHPLPSGYSQPGYGQAPQSYNSGSYG---AGYPQAPAYSADG 575
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 157/236 (66%), Gaps = 4/236 (1%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+ ++KI++PN +VGV+IGKAG+TI++LQ SGAKIQ+TRD D P + TR V+I GT
Sbjct: 142 STTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDISGTPDQ 201
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I +AE+LI V+AEADAG S ++ R Q AEQ ++++ N KVGL+IG+GGETI
Sbjct: 202 ISRAEQLIIDVLAEADAGSSGTISNRKYNAPQP--GAEQFQMQIANNKVGLVIGKGGETI 259
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K +Q +S ARIQ+IP HLP GD S ER + + G QIEIA++++ EV S+ + +SG
Sbjct: 260 KSMQAKSQARIQVIPLHLPPGDTSTERTLYIDGTAEQIEIAKQLVSEVTSENRARNQMSG 319
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPP 434
G++QQ YRP P WG G+ +Q Y Y Q G YP P Y PYG+YPP
Sbjct: 320 GYSQQGYRPPRPQA--NWGAPGAPTTQQPGYGYMQPGAYPGAPPQYGQQPYGSYPP 373
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 190/325 (58%), Gaps = 30/325 (9%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S++I +P+ KVGV+IGK G+TI+ +Q SGAKIQIT+D DADPH+ TR VE++GT I
Sbjct: 87 SKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGTSEQIS 146
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+AE+LIN VIAE DAGGS S GL T Q AEQ I+VPN+KVGL+IG+GGETIK
Sbjct: 147 RAEELINDVIAETDAGGSASSAVHGLNTKQP--GAEQFSIRVPNDKVGLLIGKGGETIKY 204
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS-QTVRPSTLSGG 379
+Q+RSGAR+Q+IP HLP GD + ER V + G QIE A+E++ +VL+ + + T S
Sbjct: 205 MQSRSGARMQIIPLHLPPGDPTTERTVYINGLTEQIEAAKELVNDVLNGKRIIDPTGSSS 264
Query: 380 FNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAP 439
+ Q Y TG W G P Q Y Y Q G P+ P YGNY Q
Sbjct: 265 YGQPTYP---ATG--NWAQPGQTPMQQPQYGYAQPGNQPT-----PPAYYGNYTQQPAWD 314
Query: 440 RSNYGGPPNMQGA--AGGYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPAG-GPPP 496
+SN P M GY YY GQ + P++ S++ + P A +G G
Sbjct: 315 QSN---PTTMSQTQQMAGYGYY-GQQPQMGSAPLNSSYNQT-------PPVASSGYGNSY 363
Query: 497 SQANYNYGQPHTSE---YGHQQPYA 518
SQ NYGQ +S+ Q+PYA
Sbjct: 364 SQQTSNYGQNISSQTPTLEQQRPYA 388
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 35/262 (13%)
Query: 18 KRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGSEVKRPRLDDDKTEKPDG 77
KRKLD E + + + E+ + A+ +++KRPRL D + PD
Sbjct: 16 KRKLDVFELAK-------------QRAQEIASRI-----ANDADLKRPRLVSDSS--PDP 55
Query: 78 PVNVNGLKEEKPDEVVD-AEQL-----TEDTTKEEELESAEVKTEQHSSVEEQASVDNQQ 131
P + P V A Q ++ T+K + S +V E ++ Q
Sbjct: 56 PSLYSNSIPAPPSYTVSYASQQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQS 115
Query: 132 ISVKEETKEVLFSTEEAFIDVKEE-TKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSD 190
+ + TK+ DV+ T E + EE + + + + V +
Sbjct: 116 GAKIQITKDQDADPHSLTRDVELMGTSEQISRAEELINDVIAETDAGGSASSAVHGLNTK 175
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQIT--RDADADPHAATR 248
P + S I VPN+KVG+LIGK G+TI+Y+Q SGA++QI DP R
Sbjct: 176 QPGAEQFS-----IRVPNDKVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDP-TTER 229
Query: 249 PVEIIGTLSNIDKAEKLINAVI 270
V I G I+ A++L+N V+
Sbjct: 230 TVYINGLTEQIEAAKELVNDVL 251
>gi|449438689|ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T S+KI +PN KVG++IGK G+TI+YLQ SGAKIQITRD +ADP + TR VE++GT
Sbjct: 85 TTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQ 144
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ +AE+LIN VIAEAD+GGS S + + ++Q EQ +K+PN KV L+IG+GGETI
Sbjct: 145 VSRAEQLINEVIAEADSGGSASTTNQAINSSQP--GVEQFVMKIPNNKVALVIGKGGETI 202
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
K +Q++S AR+Q+IP HLP GD S ER V + G QIE A+E+I EV+S
Sbjct: 203 KSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVIS 252
>gi|449495710|ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 126/170 (74%), Gaps = 2/170 (1%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T S+KI +PN KVG++IGK G+TI+YLQ SGAKIQITRD +ADP + TR VE++GT
Sbjct: 85 TTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQ 144
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ +AE+LIN VIAEAD+GGS S + + ++Q EQ +K+PN KV L+IG+GGETI
Sbjct: 145 VSRAEQLINEVIAEADSGGSASTTNQAINSSQP--GVEQFVMKIPNNKVALVIGKGGETI 202
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
K +Q++S AR+Q+IP HLP GD S ER V + G QIE A+E+I EV+S
Sbjct: 203 KSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVIS 252
>gi|15225229|ref|NP_180167.1| upstream element-binding protein [Arabidopsis thaliana]
gi|19310435|gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana]
gi|20197266|gb|AAM15002.1| unknown protein [Arabidopsis thaliana]
gi|20197368|gb|AAM15045.1| unknown protein [Arabidopsis thaliana]
gi|110741998|dbj|BAE98938.1| hypothetical protein [Arabidopsis thaliana]
gi|330252684|gb|AEC07778.1| upstream element-binding protein [Arabidopsis thaliana]
Length = 632
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 165/262 (62%), Gaps = 6/262 (2%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++KI++PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP+ ATR V++ GT I
Sbjct: 135 TKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQIS 194
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LI V+ EA+AG + G A+Q +K+PN KVGLIIG+GGETIK
Sbjct: 195 KAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKS 254
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPSTLSG 378
+Q ++GARIQ+IP HLP GD + ER +++ G QIE A++++ E++S +R S + G
Sbjct: 255 MQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNEIISGENRMRNSAMGG 314
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMA 438
G+ QQ P P W P G P+QP Y Q G YP P Y PYG+YP Q A
Sbjct: 315 GYPQQGGYQARP--PSSWAPPGGPPAQPGYGGYMQPGAYPG-PPQYGQSPYGSYPQQTSA 371
Query: 439 PRSNYGG-PPNMQGAAGGYDYY 459
+ PP+ Q A G YDYY
Sbjct: 372 GYYDQSSVPPSQQSAQGEYDYY 393
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/265 (46%), Positives = 167/265 (63%), Gaps = 10/265 (3%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++KI++PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP+A TR V++ GT I
Sbjct: 135 TKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNATTRTVDLTGTPDQIS 194
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LI V+ EA+AG + + G A+Q +K+PN KVGLIIG+GGETIK
Sbjct: 195 KAEQLITDVLQEAEAGNT-AGSGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKS 253
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPSTLSG 378
+Q ++GARIQ+IP HLP GD + ER +++ G QIE A++++ E++S +R S + G
Sbjct: 254 MQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNEIISGENRMRNSAMGG 313
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMA 438
G+ QQ P P W P G+ P+QP Y Q G YP P Y PYG+YP Q
Sbjct: 314 GYPQQGGYQARP--PSSWAPPGAPPAQPGYGGYMQPGAYPGP-PQYGQSPYGSYPQQTSG 370
Query: 439 PRSNYGG----PPNMQGAAGGYDYY 459
S+ PP+ Q A G YDYY
Sbjct: 371 GYSSTWDQSSVPPSQQSAHGEYDYY 395
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 4/171 (2%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KI++PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ TR VE++GT I
Sbjct: 98 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 157
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LIN V++EA+AGGS +V+R L T QA +EQ +KVPN KVGLIIG+GGETIK
Sbjct: 158 KAEQLINDVLSEAEAGGS-GIVSRRL-TGQA--GSEQFVMKVPNNKVGLIIGKGGETIKN 213
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
+Q R+GARIQ+IP HLP GD S ER V++ G QIE A++++ EV+S+ +
Sbjct: 214 MQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISEWL 264
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 129/179 (72%), Gaps = 4/179 (2%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S +S+KI+VP +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ R VE++GT
Sbjct: 135 SGLSKKIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPE 194
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
I KAE+LIN V+AEADAGGS ++ R G +E +K+PN KVGL+IG+GG++
Sbjct: 195 QIAKAEQLINDVLAEADAGGSGTISRR----YAGQGGSEHFSMKIPNNKVGLVIGKGGDS 250
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTL 376
IK +Q RSGARIQ+IP HLP GD S ER V + G Q+E A++++ EV S+ + P +
Sbjct: 251 IKNMQARSGARIQVIPLHLPPGDTSTERTVHIEGTSEQVEAAKQLVNEVTSEELLPFVV 309
>gi|242058519|ref|XP_002458405.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
gi|241930380|gb|EES03525.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
Length = 343
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 139/198 (70%), Gaps = 10/198 (5%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+SR IEVPN+KVGVLIGKAG+TIR LQ +SGA IQI + AD D +A TR V ++G ++
Sbjct: 155 ISRTIEVPNSKVGVLIGKAGETIRNLQKSSGAWIQIAKHADVDSNALTRSVLLVGKPGSV 214
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
DKAE+LI +VIAEA+A ARG + Q+ +EQ ++ VPN K+GLIIG+ GETIK
Sbjct: 215 DKAEQLIESVIAEAEA-------ARGFGSGQS--GSEQFDMAVPNNKIGLIIGKRGETIK 265
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSG 378
LQ +SGARI+ IP+ EG S RIVRVTG+ +QIE+A+++IK+ ++QT + + SG
Sbjct: 266 DLQLKSGARIEFIPKIPLEGVTSTGRIVRVTGNKQQIEVAKDLIKQAVNQTFPKHTNQSG 325
Query: 379 GFNQQAYRPRVPTGPPQW 396
+ Q YRP+ QW
Sbjct: 326 RYGPQGYRPQGRGAGSQW 343
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 127/169 (75%), Gaps = 4/169 (2%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KIE+PN +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ TR VE++G I
Sbjct: 141 SKKIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELMGNPDQIA 200
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LI+ V+AEAD GGS ++ R T Q G +E +K+PN KVGL+IG+GG++IK
Sbjct: 201 KAEQLISEVLAEADVGGSGTVSRR--FTGQ--GGSEHFVMKIPNNKVGLVIGKGGDSIKN 256
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+Q R+GARIQ+IP HLP GD S +R V + G QIE+A++++ E +S+
Sbjct: 257 MQARTGARIQVIPLHLPPGDTSTDRNVHIEGTSEQIELAKQLVNEAISE 305
>gi|168026870|ref|XP_001765954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682860|gb|EDQ69275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 770
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 121/170 (71%), Gaps = 6/170 (3%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
SRKIEVPN+KVG++IGK G+TI+YLQ+ SGA+IQ+ RD ++DP ++TR VE++GT I
Sbjct: 309 SRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQIS 368
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+AE+L+ VIAEA G + EQV+IKVPN KVGLIIGRGGETIK
Sbjct: 369 RAEQLVKDVIAEASTGAPGGAFG---GRSFGGHGGEQVQIKVPNNKVGLIIGRGGETIKS 425
Query: 321 LQTRSGARIQLIPQHLPEGD-GSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ+RSGARIQ+ Q+ E + G+ ER+V + G + ++A E+IKEV+ +
Sbjct: 426 LQSRSGARIQV--QNDSETEPGATERVVTLIGIKKVTDMAYELIKEVIDE 473
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 35/196 (17%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I+VPNNKVG++IG+ G+TI+ LQ SGA+IQ+ D++ +P A R V +IG D A
Sbjct: 404 QIKVPNNKVGLIIGRGGETIKSLQSRSGARIQVQNDSETEPGATERVVTLIGIKKVTDMA 463
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+LI VI E A ++A L + N L+I + ++ L+
Sbjct: 464 YELIKEVIDELAASLRMIVLAMILYAMSS------------NSDSSLVI---EDMLRHLE 508
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE--VLSQTVRPSTLSGGF 380
R + + DG +T D R + ++++ + ++T RP GG+
Sbjct: 509 RRK--------KGMWTSDG-------ITSDFRLLPSESQVLRNDALQNRTSRP---PGGY 550
Query: 381 NQQAYRPRVPTGPPQW 396
N Q P+GP QW
Sbjct: 551 NLQYGSGYRPSGPQQW 566
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD-GSKERIVRVTG 351
G E +I+VPN KVGL+IG+GGETIK LQ +SGARIQ+ E D S R V + G
Sbjct: 305 GPHESRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDG--ESDPRSSTRQVELMG 362
Query: 352 DMRQIEIAQEMIKEVLSQ 369
QI A++++K+V+++
Sbjct: 363 TPEQISRAEQLVKDVIAE 380
>gi|168028621|ref|XP_001766826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682035|gb|EDQ68457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 705
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 125/173 (72%), Gaps = 4/173 (2%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
SRKI+VPN+KVG++IGK G+TI+YLQ+ SGA+IQ+ RD ++DP ++TR VE++GT I
Sbjct: 246 SRKIDVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQIS 305
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASG-AAEQVEIKVPNEKVGLIIGRGGETIK 319
+AE+L+ VIAEA AG G G A EQV++KVPN KVGLIIGRGGETIK
Sbjct: 306 RAEQLVKDVIAEASAGTPGGGGLGGRGFGGPVGPAGEQVQVKVPNNKVGLIIGRGGETIK 365
Query: 320 GLQTRSGARIQLIPQHLPEGD-GSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
LQ+RSGARIQ+ Q+ E + G+ ER+V + G+ + ++A E+IKEV+ +
Sbjct: 366 NLQSRSGARIQV--QNDSETEPGATERMVTLIGNKKATDMAYELIKEVIDELT 416
>gi|413926083|gb|AFW66015.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 317
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+KIE+PN +VGV+IGKAG+TIRY+Q SGAKIQ+TRD +A+P A TR VE+ G I
Sbjct: 140 SKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQIS 199
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
KAE+LI V+AEADAG S + A G AE ++K+ N KVGLIIG+GGETIK
Sbjct: 200 KAEQLIKEVLAEADAGSSGAGSGGRKYNATQPG-AETFQMKIANNKVGLIIGKGGETIKS 258
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+Q SGARIQ+IP HLP GD S ER V + G QIE A+++I EV S+
Sbjct: 259 MQANSGARIQVIPLHLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSEV 308
>gi|302756263|ref|XP_002961555.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
gi|300170214|gb|EFJ36815.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
Length = 471
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 127/197 (64%), Gaps = 13/197 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + +++++VPN KVG++IGK G+TIR LQ SGAKIQ+TRDA+ADP A TR VE
Sbjct: 122 PSDSYVQHQTKRVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVE 181
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+ GT I +AE+LI V+ G +V + + + ++VPN KVGLII
Sbjct: 182 LTGTPEQISRAEQLIREVV------GDQGIVGGPVGGGGTGSVGDPIHVRVPNNKVGLII 235
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGD-GSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+GGETI+ LQ SGARIQ+ QH E + G+ ERIV + G +Q +IA +MIK+V+ +
Sbjct: 236 GKGGETIRNLQQTSGARIQV--QHDRETEPGATERIVTLVGTKQQTDIATDMIKDVIGEG 293
Query: 371 VRPSTLSGGFNQQAYRP 387
+ +GG+ QQ +RP
Sbjct: 294 ---RSRAGGY-QQGFRP 306
>gi|302775686|ref|XP_002971260.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
gi|300161242|gb|EFJ27858.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
Length = 465
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 128/197 (64%), Gaps = 13/197 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + +++++VPN KVG++IGK G+TIR LQ SGAKIQ+TRDA+ADP A TR VE
Sbjct: 122 PSDSYVQHQTKRVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVE 181
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+ GT I +AE+LI V+ G +V + G + + ++VPN KVGLII
Sbjct: 182 LTGTPEQISRAEQLIREVV------GDQGIVGGPVGGGGTGGVGDPIHVRVPNNKVGLII 235
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGD-GSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+GGETI+ LQ SGARIQ+ QH E + G+ ERIV + G +Q +IA +MIK+V+ +
Sbjct: 236 GKGGETIRNLQQTSGARIQV--QHDRETEPGATERIVTLVGTKQQTDIATDMIKDVIGEG 293
Query: 371 VRPSTLSGGFNQQAYRP 387
+ +GG+ QQ +RP
Sbjct: 294 ---RSRAGGY-QQGFRP 306
>gi|413955479|gb|AFW88128.1| hypothetical protein ZEAMMB73_458885 [Zea mays]
Length = 655
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 78/114 (68%), Gaps = 5/114 (4%)
Query: 219 GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGS 278
G+TIRY+Q SGAKIQ+TRD +A+P A TR VE+ G I KAE+LI V+AEADAG S
Sbjct: 479 GETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKAEQLIKEVLAEADAGSS 538
Query: 279 PSLVAR--GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
AR G AE ++K+ N KVGLII +GGETIK +QT+SGARIQ
Sbjct: 539 G---ARSGGRKYNATQQGAEMYQMKIANNKVGLIIRKGGETIKSMQTKSGARIQ 589
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQ 234
++++ NNKVG++I K G+TI+ +Q SGA+IQ
Sbjct: 558 QMKIANNKVGLIIRKGGETIKSMQTKSGARIQ 589
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
V+I+V ++ L I GETI+ +Q +SGA+IQ+ H E G+ R V ++G QI
Sbjct: 463 MVDIRVQAKR--LKIQMEGETIRYIQLQSGAKIQVTRDHEAE-PGALTRQVELSGKPEQI 519
Query: 357 EIAQEMIKEVLSQ 369
A+++IKEVL++
Sbjct: 520 SKAEQLIKEVLAE 532
>gi|224088888|ref|XP_002308575.1| predicted protein [Populus trichocarpa]
gi|222854551|gb|EEE92098.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 67/83 (80%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+KI++P +VGV+IGK G+TI+YLQ SGAKIQ+TRD DADP++ TR VE++GT I K
Sbjct: 139 KKIDIPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRMVELMGTPEQIAK 198
Query: 262 AEKLINAVIAEADAGGSPSLVAR 284
AE+LIN V+AEA+AGGS ++ R
Sbjct: 199 AEQLINDVLAEAEAGGSGTVSQR 221
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I +P +VG+IIG+GGETIK LQ +SGA+IQ + + + S R+V + G QI
Sbjct: 140 KIDIPQGRVGVIIGKGGETIKYLQLQSGAKIQ-VTRDMDADPNSPTRMVELMGTPEQIAK 198
Query: 359 AQEMIKEVLSQ 369
A+++I +VL++
Sbjct: 199 AEQLINDVLAE 209
>gi|326428680|gb|EGD74250.1| hypothetical protein PTSG_12419 [Salpingoeca sp. ATCC 50818]
Length = 619
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 16/195 (8%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P+ KVG++IGK G+TI LQ SGA++Q+ +D DP A +P+ + G I++A++L
Sbjct: 200 IPSEKVGMVIGKGGETINRLQEQSGARLQVIQD---DPFAQEKPLRMTGRRDAIERAKQL 256
Query: 266 INAVIA---EADAG--GSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ +I E D + L + + ++ +++VEIKVP VG +IGRGG++IK
Sbjct: 257 VKDLIDPEPEHDPMYPSTMGLSSGDIVNNLSAYRSKKVEIKVPRVAVGRVIGRGGDSIKR 316
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
+Q SGAR+Q P+ RI +TG M IE A++MI +++ Q ST S
Sbjct: 317 IQAESGARVQFEPE-----TNQDFRIATITGTMPVIEAAEKMIMDII-QDAEVSTSSA-- 368
Query: 381 NQQAYRPRVPTGPPQ 395
+ RPR P PQ
Sbjct: 369 RPRDDRPREPMPVPQ 383
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 16/171 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I+VP VG +IG+ GD+I+ +Q SGA++Q + + D AT I GT+ I+ A
Sbjct: 295 EIKVPRVAVGRVIGRGGDSIKRIQAESGARVQFEPETNQDFRIAT----ITGTMPVIEAA 350
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
EK+I +I +A+ S +A+ + + VP E+ GLIIGRGGE+I+ +
Sbjct: 351 EKMIMDIIQDAEVSTS---------SARPRDDRPREPMPVPQERAGLIIGRGGESIRMIM 401
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
+SGA ++L + P +G K ++GD QI A+ +I+E L RP
Sbjct: 402 QQSGAHVEL-DRAQPAVNGDK--TFWISGDPEQIATAKRLIQEKLDAHRRP 449
>gi|403375361|gb|EJY87653.1| KH domain containing protein [Oxytricha trifallax]
Length = 794
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 169 EEESVEPSNVVPQQVVDNSKSDDPSSTD---DSTMSRKIEVPNNKVGVLIGKAGDTIRYL 225
EE + + + QV+ S+ DD T S + I VPN+ VG++IGK+GDTIR L
Sbjct: 354 REEQLSVAQQINNQVLPTSQMDDSMMTPYGPPSPYAYIIPVPNDCVGLIIGKSGDTIRQL 413
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +SGAKIQ+ + P++ R V + GT KA++LI +I + P +
Sbjct: 414 QQDSGAKIQVAK--KEIPNSNLRNVFVEGTPDKYQKAKELIEEIIKDQRRSSDPQIHVGD 471
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKER 345
+ +IKVP++ VGLIIG+ GE ++G+ RS +I +PQ + G++ER
Sbjct: 472 VNPFHGP----HHKIKVPDKFVGLIIGKSGENLRGIAQRSNTKI-FVPQKNND-PGAEER 525
Query: 346 IVRVTGDMRQIEIAQEMIKEVL 367
I+ GD++ IEIA++ I ++
Sbjct: 526 IIEADGDLQNIEIARQEILNLI 547
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 155/339 (45%), Gaps = 58/339 (17%)
Query: 80 NVNGLKEEKPDEV--VDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASVDNQQI---SV 134
N N KPDE + A+Q+ E+ ++E+ S +T +Q D + +
Sbjct: 139 NFNKWGNNKPDEQQQLTAQQINEEQARKEKRMSRFTETPVGLQPNQQGLNDRNLMPPPGI 198
Query: 135 KEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEE---ESVEPSNVV----PQQVVDNS 187
++ K+ +++ D EE +++++ V++ +S +P+ + P + + S
Sbjct: 199 PQKRKKFVWT------DANEEE----LRQQQLVEKRYGLDSSQPALMFGGANPSLMQNLS 248
Query: 188 KSDDPSSTDDSTMSRKIEVPNNK----VGVLIGKAGDTIRYLQYNSGAKIQIT-RDADAD 242
+ + D S + +KI +P N +G+LIG G + L+ SG KI I R + +
Sbjct: 249 PAILSALQDSSKIKKKIYLPKNSGVNFIGLLIGPKGLYQKRLEEESGCKILIRGRGSQKE 308
Query: 243 PHAATRP------VEIIG-TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGA- 294
A V +IG ++ N+ +A+ I V++ AD + L+ AQ
Sbjct: 309 GSAPQPDDDDDQHVLVIGDSVENVRRAQNAIERVVS-ADDSTRNKIREEQLSVAQQINNQ 367
Query: 295 ---AEQVE----------------IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQH 335
Q++ I VPN+ VGLIIG+ G+TI+ LQ SGA+IQ+ +
Sbjct: 368 VLPTSQMDDSMMTPYGPPSPYAYIIPVPNDCVGLIIGKSGDTIRQLQQDSGAKIQVAKKE 427
Query: 336 LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
+P S R V V G + + A+E+I+E++ R S
Sbjct: 428 IP---NSNLRNVFVEGTPDKYQKAKELIEEIIKDQRRSS 463
>gi|340377102|ref|XP_003387069.1| PREDICTED: far upstream element-binding protein 1-like [Amphimedon
queenslandica]
Length = 579
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 20/175 (11%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
TM+ +I+VPN VG++IG+ G+ I LQ SGAKIQ+ D + R V I GT
Sbjct: 85 TMTIEIKVPNRMVGLVIGRQGEMINKLQAESGAKIQVA--PDGSEVSGERSVSISGTPDT 142
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
++KA+ L+N VI +AGG S+V L Q E VE+ +P KVGLIIG+GGE I
Sbjct: 143 VEKAKLLVNGVI--ENAGGVTSVVTN-LEAGQ-----EVVELMIPAGKVGLIIGKGGEMI 194
Query: 319 KGLQTRSGARIQLIPQHLPEGDG----SKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++Q+I DG + E+ +R+TG + A++++ +++ Q
Sbjct: 195 KMLQERAGCKMQMIQ------DGPYASTPEKPLRMTGFSENCKKARQLVLDLMEQ 243
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 125/244 (51%), Gaps = 34/244 (13%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIE--VPNNKVGVLIGKAGDTIRYLQYN 228
++VE + ++ V++N+ T+ +E +P KVG++IGK G+ I+ LQ
Sbjct: 141 DTVEKAKLLVNGVIENAGGVTSVVTNLEAGQEVVELMIPAGKVGLIIGKGGEMIKMLQER 200
Query: 229 SGAKIQITRDADADPHAAT--RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGL 286
+G K+Q+ +D P+A+T +P+ + G N KA +L+ ++ + + L ARGL
Sbjct: 201 AGCKMQMIQDG---PYASTPEKPLRMTGFSENCKKARQLVLDLMEQKE------LEARGL 251
Query: 287 ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQL---IPQHLPEGDGSK 343
++G E +E++VP+E VG IIGR GE I +Q+ R+Q IP H P
Sbjct: 252 TGDLSTGLPEMIEMRVPSELVGFIIGRNGENINNIQSLCNVRLQFHHDIP-HTP------ 304
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHP 403
R+ + G +++ A+ M++E++ + Q +PR+ PQ GP+
Sbjct: 305 YRLTTIAGKPLEVQKAKRMVEEMVGER----------QQTGIKPRIDLPDPQ-GPQVQTV 353
Query: 404 SQPM 407
S P+
Sbjct: 354 SFPI 357
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP+ VG +IG+ G+ I +Q ++Q D PH R I G + KA
Sbjct: 264 EMRVPSELVGFIIGRNGENINNIQSLCNVRLQFHHDI---PHTPYRLTTIAGKPLEVQKA 320
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
++++ ++ E G + L Q + V +P K GLIIG+GG+T++ L
Sbjct: 321 KRMVEEMVGERQQTGIKPRID--LPDPQGP-QVQTVSFPIPANKCGLIIGKGGDTVRQLM 377
Query: 323 TRSGARIQLI--PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+S I+L P P+ E++ + G + I+ AQ +I++ L
Sbjct: 378 VQSNCHIELDRGPNTNPQ-----EKLFNLRGLPQNIQAAQNLIRQKL 419
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 81/218 (37%), Gaps = 22/218 (10%)
Query: 75 PDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASV------- 127
P+ P+ + G E A QL D +++ELE+ + + + + E +
Sbjct: 217 PEKPLRMTGFSEN----CKKARQLVLDLMEQKELEARGLTGDLSTGLPEMIEMRVPSELV 272
Query: 128 ------DNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQ 181
+ + I+ + V + K E K + VE Q
Sbjct: 273 GFIIGRNGENINNIQSLCNVRLQFHHDIPHTPYRLTTIAGKPLEVQKAKRMVEEMVGERQ 332
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA 241
Q + D P + +P NK G++IGK GDT+R L S I++ R +
Sbjct: 333 QTGIKPRIDLPDPQGPQVQTVSFPIPANKCGLIIGKGGDTVRQLMVQSNCHIELDRGPNT 392
Query: 242 DPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSP 279
+P + + G NI A+ LI + + GG P
Sbjct: 393 NPQ--EKLFNLRGLPQNIQAAQNLIR---QKLEGGGIP 425
>gi|301116557|ref|XP_002906007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109307|gb|EEY67359.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 550
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 126/255 (49%), Gaps = 27/255 (10%)
Query: 125 ASVDNQQISVKEETKEVLFSTEEAFIDVKEETK---EVTVKEEETVKEEESVEPSNVVPQ 181
A D + +E+LF+ ++A +E+ + E+ E E S+ +N P
Sbjct: 117 ADTDEAVAKAQSAVEEILFNPQQAMKLKQEQLRKVAELNGTLNENYSESHSIGQNNYGP- 175
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA 241
D + S ++VP VG +IG+ G+TIR LQ SGA IQI R+ +
Sbjct: 176 ------------GNDAHSSSYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEG 223
Query: 242 DPHAATRPVEIIGTLSNIDKAEKLINAVIAEAD----AGGSPSLVARGLATAQASG---- 293
P A R V I G ++ A+KLI +I E AGG R A+ G
Sbjct: 224 APQTADRFVNIAGNQDTLELAQKLIQNLIDERQQNQGAGGFRERDDRD-RMARYGGINPD 282
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDM 353
++ VEI VPNE+VGLIIGRGG TIK +Q R+G + IPQ P+ + + R++ + G M
Sbjct: 283 GSDSVEIMVPNERVGLIIGRGGCTIKAIQQRTGTSV-TIPQ-TPDPNHPEMRLITIRGTM 340
Query: 354 RQIEIAQEMIKEVLS 368
E A+ I+ ++S
Sbjct: 341 EAKEAAKFEIQSMVS 355
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 12/173 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D + S +I VPN +VG++IG+ G TI+ +Q +G + I + D + H R + I GT+
Sbjct: 282 DGSDSVEIMVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPN-HPEMRLITIRGTM 340
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ A+ I +++++ P G + + + + ++VPN++VG+IIG+ GE
Sbjct: 341 EAKEAAKFEIQSMVSD-----EP-----GQRHGYGATSGQTIYMQVPNDRVGVIIGKRGE 390
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
TIKG+Q R RIQ IPQ EG R + + G + A+E + V+ Q
Sbjct: 391 TIKGIQDRHAVRIQ-IPQVADEGSNPPVRTISIQGPAPNLAGAKEEVDMVILQ 442
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 17/124 (13%)
Query: 155 ETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPS------STDDSTMSRKIEVPN 208
E + +T++ KE E ++V SD+P +T T+ ++VPN
Sbjct: 330 EMRLITIRGTMEAKEAAKFEIQSMV---------SDEPGQRHGYGATSGQTIY--MQVPN 378
Query: 209 NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINA 268
++VGV+IGK G+TI+ +Q +IQI + AD + R + I G N+ A++ ++
Sbjct: 379 DRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTISIQGPAPNLAGAKEEVDM 438
Query: 269 VIAE 272
VI +
Sbjct: 439 VILQ 442
>gi|348530804|ref|XP_003452900.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 685
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 124/224 (55%), Gaps = 19/224 (8%)
Query: 149 FIDVKEETKEVTVKEEETVK-----EEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRK 203
F K + ++ E ET K + ES + ++ Q +S P+ST +
Sbjct: 67 FTAQKRQLEDTNTDEPETKKLAAQSDLESAKALSIGAQLAALAQQSIRPTST-----TED 121
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
VP++ VG++IG+ G+ I +Q SG K+QI D+ P R V + GT +I KA+
Sbjct: 122 YSVPDSMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLPE---RNVSLTGTQDSIQKAK 178
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+N +++ G+P L + ++ +GA E+ +P K GL+IG+GGETIK LQ
Sbjct: 179 RLLNEIVSRGR--GTPPLSSYHDSSNGQNGAVH--EMMIPAGKAGLVIGKGGETIKQLQE 234
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
R+G ++ LI Q +G + ++ +R+ GD +++ AQEM++E+L
Sbjct: 235 RAGVKMILI-QDASQGP-NVDKPLRIIGDPYKVQQAQEMVQEIL 276
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 119/216 (55%), Gaps = 22/216 (10%)
Query: 170 EESVEPSNVVPQQVVDNSKSDDP-SSTDDSTMSR-----KIEVPNNKVGVLIGKAGDTIR 223
++S++ + + ++V + P SS DS+ + ++ +P K G++IGK G+TI+
Sbjct: 171 QDSIQKAKRLLNEIVSRGRGTPPLSSYHDSSNGQNGAVHEMMIPAGKAGLVIGKGGETIK 230
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGG------ 277
LQ +G K+ + +DA P+ +P+ IIG + +A++++ ++ + D GG
Sbjct: 231 QLQERAGVKMILIQDASQGPNV-DKPLRIIGDPYKVQQAQEMVQEILRDRDQGGYSERSE 289
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
S + G+ + GA ++EI VP VG++IGR GE IK +Q +G RIQ
Sbjct: 290 FSSRMGGGMDVSLCVGA--RLEIPVPRHSVGVVIGRNGEMIKKIQNDAGVRIQ-----FK 342
Query: 338 EGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+ DG+ ++I ++G + E A ++I ++L Q++R
Sbjct: 343 QDDGTGPDKIAHISGPPERCEHAAQIINDLL-QSIR 377
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP + VGV+IG+ G+ I+ +Q ++G +IQ +D P + I G + A
Sbjct: 309 EIPVPRHSVGVVIGRNGEMIKKIQNDAGVRIQFKQDDGTGPD---KIAHISGPPERCEHA 365
Query: 263 EKLINAVI------------AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
++IN ++ G RG ++ +P +K GL+
Sbjct: 366 AQIINDLLQSIRVREEGQGGPPGPPGMPSGNRGRGGGQGGWGPPGGEMTFSIPAQKCGLV 425
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IGRGGE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 426 IGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 481
>gi|268558150|ref|XP_002637065.1| Hypothetical protein CBG09562 [Caenorhabditis briggsae]
Length = 590
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 107/181 (59%), Gaps = 20/181 (11%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
+P D+ ++ K +P + VG++IG+ G I+ +Q +G ++Q++ D+D ++ R V
Sbjct: 42 NPFMGDNENVNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMSSDSD---NSGVRQV 98
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR---GLATAQASGAAEQVEIKVPNEKV 307
+ GT +N++ A+ LIN V+A S R G AQ + ++I +P +
Sbjct: 99 TLEGTRANVEAAKVLINEVVAR-------SQTPRPQYGFPRAQNT-----IDIAIPPNRC 146
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GLIIG+ GETI+ LQ +SG ++ L+ GD +K +R+TGD ++IEIA++++ E+L
Sbjct: 147 GLIIGKAGETIRQLQEKSGCKMVLVQDSQTVGDQAKP--LRITGDPQKIEIAKQLVAEIL 204
Query: 368 S 368
+
Sbjct: 205 N 205
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D DP+A R I+GT I +A
Sbjct: 231 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDEDPNAPERCAIIMGTRDQIYRA 288
Query: 263 EKLINAVIAEA--DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ I ++ ++ GGS T A + + VP K GL+IG+GGETIK
Sbjct: 289 TERITELVRKSAQQQGGS--------MTGSAGAESSTFFMSVPAAKCGLVIGKGGETIKQ 340
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ + SGA +L +E++ + G RQIE A+ +I+
Sbjct: 341 INSESGAHCEL---SRDATGNVEEKVFVIKGGKRQIEHAKHLIR 381
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 172 SVEPSNVVPQQVVDNSKSDDPS-STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSG 230
+VE + V+ +VV S++ P + + I +P N+ G++IGKAG+TIR LQ SG
Sbjct: 106 NVEAAKVLINEVVARSQTPRPQYGFPRAQNTIDIAIPPNRCGLIIGKAGETIRQLQEKSG 165
Query: 231 AKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ 290
K+ + +D+ A +P+ I G I+ A++L+ ++ +
Sbjct: 166 CKMVLVQDSQTVGDQA-KPLRITGDPQKIEIAKQLVAEILNSGPD--GSGGGGHQVQHIG 222
Query: 291 ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVT 350
+ GA+ + E+ VP VG+IIG+ G+TIK L +G +IQ P P + ER +
Sbjct: 223 SGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDEDPN---APERCAIIM 279
Query: 351 GDMRQIEIAQEMIKEVLSQT 370
G QI A E I E++ ++
Sbjct: 280 GTRDQIYRATERITELVRKS 299
>gi|348570404|ref|XP_003470987.1| PREDICTED: far upstream element-binding protein 3-like [Cavia
porcellus]
Length = 605
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G A G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHSDAEGNSTVQ--------EILIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERAGVKMVMIQDGPLPTG---TDKPLRITGDPFKVQQAREMVLEIVRE 234
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 21/204 (10%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTD---DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQY 227
ES+E + + Q+VD ++ +D +ST+ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 132 ESIEQAKRLLGQIVDRCRNGPGFHSDAEGNSTV-QEILIPASKVGLVIGKGGETIKQLQE 190
Query: 228 NSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE---ADAGGSPSLVAR 284
+G K+ + +D P +P+ I G + +A +++ ++ E AD G R
Sbjct: 191 RAGVKMVMIQDGPL-PTGTDKPLRITGDPFKVQQAREMVLEIVREKEQADFRG-----VR 244
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SK 343
G +++ +G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S
Sbjct: 245 GDFSSRLAGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGVSP 297
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVL 367
ER +V G + + A +I E++
Sbjct: 298 ERAAQVMGPPDRCQHAAHIINELI 321
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ-----ASGAAEQVEIKVPNEKVGLIIG 312
A +IN +I E D GS ++ A G +++ VP +K GL+IG
Sbjct: 312 HAAHIINELILTAQERDGFGSLAVARGRGRGRGDWNVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D R+ + G +QIE+A+ +I E
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPSTD-PGLRLFTIRGVPQQIEVARHLIDE 423
>gi|452821097|gb|EME28131.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
gi|452821098|gb|EME28132.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 590
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++ I VP +G++IGK G+TIR LQY SGA I++ D + + RP+ + G+L +++
Sbjct: 319 NKTIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVE 378
Query: 261 KAEKLINAVIAEA--DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
A LIN ++ E GG S +A S + I++PN+KVG +IG+ G TI
Sbjct: 379 LAHNLINDIVNEGIERLGGDLSESKTLYPSASIS-----LRIQIPNDKVGWLIGKSGSTI 433
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+ LQ RSGARIQ+ P R V +TG +EIA+++I E L+
Sbjct: 434 RELQQRSGARIQVAK---PSETDIHTRSVTITGPPPFVEIAKQLIAEKLA 480
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 33/217 (15%)
Query: 171 ESVEPSN-----VVPQQVVDNSKSDDPSST---------------DDSTMSRKIEVPNNK 210
ESVE SN P +V N + D+ S DD M IEVP
Sbjct: 74 ESVETSNNTFNRAAPDEVALNKEGDNHVSMYKIEQSVSSEMGENPDDIKMDF-IEVPKEA 132
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG +IGK G+TI+ L SGA +++ R D D +A R I G ++I A++L I
Sbjct: 133 VGFIIGKGGETIKELSMKSGAYMEVER-RDIDASSANRLFRIQGISNHIQLAKQL----I 187
Query: 271 AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
E AG LV + + + + G+ Q E+ +P ++VG+IIG GG+TIK L+ +S I
Sbjct: 188 LEKVAG---VLVGQSVCSVTSVGSI-QSELWIPMDRVGVIIGIGGQTIKSLEEQSQTTIV 243
Query: 331 LIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+ H + + E++V + G +++ IA+ +I+E++
Sbjct: 244 V---HNEKVNALGEKLVTIVGKPQEVHIAEMLIQEII 277
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 20/195 (10%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI-TRDADADPHAATRPVE 251
S T ++ ++ +P ++VGV+IG G TI+ L+ S I + +A + V
Sbjct: 202 SVTSVGSIQSELWIPMDRVGVIIGIGGQTIKSLEEQSQTTIVVHNEKVNA---LGEKLVT 258
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR--------GLATAQASGAAE------- 296
I+G + AE LI +I + + +L + GL + + S +
Sbjct: 259 IVGKPQEVHIAEMLIQEIIQKPSRVMNATLYSPVMGQTTYPGLVSPELSYLSRTSLRPMT 318
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
I VP + +G+IIG+ GETI+ LQ RSGA I+++P + + ER + V+G + +
Sbjct: 319 NKTIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDN-EVSVNTVERPIIVSGSLESV 377
Query: 357 EIAQEMIKEVLSQTV 371
E+A +I +++++ +
Sbjct: 378 ELAHNLINDIVNEGI 392
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+++S +I++PN+KVG LIGK+G TIR LQ SGA+IQ+ + ++ D H TR V I G
Sbjct: 409 ASISLRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQVAKPSETDIH--TRSVTITGPPP 466
Query: 258 NIDKAEKLINAVIAEADAG 276
++ A++L IAE AG
Sbjct: 467 FVEIAKQL----IAEKLAG 481
>gi|17557820|ref|NP_505632.1| Protein C12D8.1, isoform a [Caenorhabditis elegans]
gi|3874254|emb|CAA98232.1| Protein C12D8.1, isoform a [Caenorhabditis elegans]
Length = 589
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 116/202 (57%), Gaps = 13/202 (6%)
Query: 166 TVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYL 225
++K E S + +P + + +P D+ ++ K +P + VG++IG+ G I+ +
Sbjct: 14 SLKRERSEDEEYSLPAKRPADDTDLNPFMDDNEAVNEKYPIPESAVGIVIGRGGSEIQGI 73
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G ++Q++ DADP + R V + G+ SN++ A+ LIN V+A + P G
Sbjct: 74 QAKAGCRVQMS--PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQ-NPRPQY---G 127
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKER 345
AQ + ++I +P + GLIIG+ G+TI+ LQ +SG ++ L+ + D SK
Sbjct: 128 FPRAQTT-----IDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKP- 181
Query: 346 IVRVTGDMRQIEIAQEMIKEVL 367
+R+TGD ++IE+A++++ E+L
Sbjct: 182 -LRITGDPQKIELAKQLVAEIL 202
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D DP R I+GT I +A
Sbjct: 230 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAVIMGTRDQIYRA 287
Query: 263 EKLINAVIAEADA--GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ I ++ ++ GG ++ A A S A + VP K GL+IG+GGETIK
Sbjct: 288 TERITELVKKSTMQQGGGGNV-----AGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQ 342
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ + SGA +L P G+ + E++ + G R IE A+ +I+
Sbjct: 343 INSESGAHCEL--SRDPTGN-ADEKVFVIKGGKRAIEHAKHLIR 383
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I +P N+ G++IGK+GDTIR LQ SG K+ + +D + ++P+ I G I+ A+
Sbjct: 137 IAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD-NQSVSDQSKPLRITGDPQKIELAK 195
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ ++ G S + + GA+ + E+ VP VG+IIG+ G+TIK L
Sbjct: 196 QLVAEILNSGGDGNGGSGL-QMHHAGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAM 254
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+G +IQ P P + ER + G QI A E I E+ V+ ST+ G
Sbjct: 255 ETGTKIQFKPDDDPS---TPERCAVIMGTRDQIYRATERITEL----VKKSTMQQG 303
>gi|413921491|gb|AFW61423.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 430
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 179/427 (41%), Gaps = 95/427 (22%)
Query: 340 DGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSGGFNQQAYRPRVPTGPPQWGP 398
DG ++ + I + + L QT R + SGG+ Q YRP+ QWGP
Sbjct: 16 DGFLLQLALCFSAVSVIYFSFWFLTWFLVQTFSRHTNQSGGYGPQGYRPQGQGAASQWGP 75
Query: 399 RGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG-----GPPNMQGAA 453
R SQ Y YP RG P QN Y + PYG+YPPQQ PR G GPP
Sbjct: 76 R----SQNHGYGYPPRGMPPPQN--Y-NTPYGSYPPQQGPPRGGMGWDQRQGPPPHPSYQ 128
Query: 454 GGYDYYGGQGGHVSD-RPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYN-YGQPHTSEY 511
GG Y QG D +P S PP NYN YGQ Y
Sbjct: 129 GGASDYYKQGSQPYDSQPPSY---------------------PPGPGNYNSYGQSQGPNY 167
Query: 512 GHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPVYSQ--GGLQSGYHQH--QYGK 567
G Q Y APQQ Y HGY D Y +Q Y Q G Q GY Q Y +
Sbjct: 168 GQPQ-YPQHAPQQNYSHGYGDPR------YNAPPPNQQYYGQPPMGPQQGYPQQPDPYAR 220
Query: 568 PPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPT--- 624
PPY P Q PPR G P YQ+ A SYGP H Y S T
Sbjct: 221 PPYSGPGQ-------WPPR-GAPAADGSYQA---PAASYGPPSQHPSAYGQTYSAATGSD 269
Query: 625 ----QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAG 680
Q G APAP Y Q +APGYPQQ G G
Sbjct: 270 GYAQQGYPQQGGQAPAP--YGQSAPAAPGYPQQQG------------------------G 303
Query: 681 YGQYTNTQQAYPEQPATSNAGYGYQGT-QDPSYGSSAPGSAYAAP---TGQPGYAQPAAT 736
Y QY TQ AY EQ A +NA YGYQG DP+YGS+ P Y P TGQ GYA AA+
Sbjct: 304 YAQYPQTQPAYGEQAAQTNASYGYQGAPADPNYGSAYPQPGYGPPGQATGQAGYASSAAS 363
Query: 737 QPSYDQS 743
QP+Y Q+
Sbjct: 364 QPAYGQA 370
>gi|326499738|dbj|BAJ86180.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 134
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 26/156 (16%)
Query: 207 PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI 266
P KVGV+IGK G+TI+++Q SGAKIQ+TRD D P + TR V++ GT +I +AE+LI
Sbjct: 2 PKWKVGVIIGKTGETIKHIQLQSGAKIQVTRDMDVQPSSQTRLVDLSGTPGHISRAEQLI 61
Query: 267 NAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSG 326
+ V+AEA AG ++ Q S EQ ++++ N KV
Sbjct: 62 SDVLAEAHAGSFGTIPNWKYNAPQPS--VEQFQMQIANNKV------------------- 100
Query: 327 ARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
IP H P GD S ER + + G QIEIA+++
Sbjct: 101 -----IPFHFPPGDTSTERTLYIDGTTEQIEIAKQL 131
>gi|426226097|ref|XP_004007190.1| PREDICTED: far upstream element-binding protein 3 [Ovis aries]
Length = 574
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 83 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 139
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 140 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQ--------EIPIPASKVGLVIGKGGET 191
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 192 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 241
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 139 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQEIPIPASKVGLVIGKGGETIKQLQER 198
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 199 TGVKMVMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RSDFS 255
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 256 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 308
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 309 QVMGPPDRCQHAAHVISELI 328
>gi|432848278|ref|XP_004066266.1| PREDICTED: far upstream element-binding protein 2-like [Oryzias
latipes]
Length = 584
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 101/180 (56%), Gaps = 26/180 (14%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S STM + +VP++ VG++IG+ G+ I +Q+ SG K+QI D+ P R + +
Sbjct: 95 SVRSSTMMEECKVPDSMVGLIIGRGGEQINKIQHESGCKVQIAHDSAGLPE---RSISLT 151
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
G+L I +A LI+ +V+RG + + Q E+ +P K GLIIG+
Sbjct: 152 GSLDAIQRARALID------------EIVSRGHEPSNGQQGSMQ-EMIIPAGKAGLIIGK 198
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
GGETIK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A+EM+ E+L +
Sbjct: 199 GGETIKQLQERAGVKMILIQ------DGSQPPNVDKPLRIIGDPYKVQQAKEMVNEILRE 252
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 16/203 (7%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSG 230
++++ + + ++V S+ +PS+ +M I +P K G++IGK G+TI+ LQ +G
Sbjct: 155 DAIQRARALIDEIV--SRGHEPSNGQQGSMQEMI-IPAGKAGLIIGKGGETIKQLQERAG 211
Query: 231 AKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ 290
K+ + +D P+ +P+ IIG + +A++++N ++ E D G R ++
Sbjct: 212 VKMILIQDGSQPPNV-DKPLRIIGDPYKVQQAKEMVNEILRERDHAG---FGDRSEYGSR 267
Query: 291 ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRV 349
G +EI VP + VG++IGR GE IK +Q +G +IQ P DG+ E+I +
Sbjct: 268 MGGGG--IEIPVPRQSVGVVIGRNGEMIKKIQNDAGVKIQFKPD-----DGTAPEKIAHI 320
Query: 350 TGDMRQIEIAQEMIKEVLSQTVR 372
G Q + A +I ++L Q++R
Sbjct: 321 MGPPDQCQHAVSIINDLL-QSIR 342
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 20/179 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VGV+IG+ G+ I+ +Q ++G KIQ D D A + I+G A
Sbjct: 274 EIPVPRQSVGVVIGRNGEMIKKIQNDAGVKIQFKPD---DGTAPEKIAHIMGPPDQCQHA 330
Query: 263 EKLINAV---IAEADAGG-----------SPSLVARGLATAQASGAAEQVEIKVPNEKVG 308
+IN + I D GG SP G ++ +P K G
Sbjct: 331 VSIINDLLQSIRARDEGGQGADPPASQGMSPGGRGWGRGQGSWGPPGGEMTFSIPAHKCG 390
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
++IGRGGE IK + ++GA +++ Q P GD ++ + G ++I+ A+++I+E +
Sbjct: 391 IVIGRGGENIKSISQQTGAFVEVCRQ--PNGD-PNFKLFTIRGSPQEIDHAKQLIEEKI 446
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VGLIIGRGGE I +Q SG ++Q+ + G ER + +TG + I+
Sbjct: 104 ECKVPDSMVGLIIGRGGEQINKIQHESGCKVQI----AHDSAGLPERSISLTGSLDAIQR 159
Query: 359 AQEMIKEVLSQTVRPSTLSGGFNQQAYRP 387
A+ +I E++S+ PS G Q+ P
Sbjct: 160 ARALIDEIVSRGHEPSNGQQGSMQEMIIP 188
>gi|17557818|ref|NP_505633.1| Protein C12D8.1, isoform b [Caenorhabditis elegans]
gi|3874255|emb|CAA98233.1| Protein C12D8.1, isoform b [Caenorhabditis elegans]
Length = 611
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 106/177 (59%), Gaps = 13/177 (7%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
+P D+ ++ K +P + VG++IG+ G I+ +Q +G ++Q++ DADP + R V
Sbjct: 61 NPFMDDNEAVNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMS--PDADPSSGVRMV 118
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
+ G+ SN++ A+ LIN V+A + P G AQ + ++I +P + GLI
Sbjct: 119 TLEGSRSNVETAKHLINEVVARSQ-NPRPQY---GFPRAQTT-----IDIAIPPNRCGLI 169
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IG+ G+TI+ LQ +SG ++ L+ + D SK +R+TGD ++IE+A++++ E+L
Sbjct: 170 IGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKP--LRITGDPQKIELAKQLVAEIL 224
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D DP R I+GT I +A
Sbjct: 252 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAVIMGTRDQIYRA 309
Query: 263 EKLINAVIAEADA--GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ I ++ ++ GG ++ A A S A + VP K GL+IG+GGETIK
Sbjct: 310 TERITELVKKSTMQQGGGGNV-----AGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQ 364
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ + SGA +L P G+ + E++ + G R IE A+ +I+
Sbjct: 365 INSESGAHCEL--SRDPTGN-ADEKVFVIKGGKRAIEHAKHLIR 405
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 9/176 (5%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I +P N+ G++IGK+GDTIR LQ SG K+ + +D + ++P+ I G I+ A+
Sbjct: 159 IAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD-NQSVSDQSKPLRITGDPQKIELAK 217
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ ++ G S + GA+ + E+ VP VG+IIG+ G+TIK L
Sbjct: 218 QLVAEILNSGGDGNGGSGLQMH-HAGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAM 276
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+G +IQ P P + ER + G QI A E I E+ V+ ST+ G
Sbjct: 277 ETGTKIQFKPDDDPS---TPERCAVIMGTRDQIYRATERITEL----VKKSTMQQG 325
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
+P VG++IGRGG I+G+Q ++G R+Q+ P P S R+V + G +E A+
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPS---SGVRMVTLEGSRSNVETAKH 132
Query: 362 MIKEVLSQTVRP 373
+I EV++++ P
Sbjct: 133 LINEVVARSQNP 144
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G S G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPSFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---TDKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSL-----VARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I E D GS ++ +RG + G +++ VP +K GL+IG
Sbjct: 312 HAAHIISELILTAQERDGFGSLAVPRGRGRSRGDWSVGTPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGIPQQIEVARHLIDEKVGGT 428
>gi|441623750|ref|XP_004088935.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Nomascus leucogenys]
Length = 847
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 181 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 237
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 238 SIEQAKRLLGQIVDRCRNGP-------GFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 289
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 290 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 339
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IG+ G+TI+ LQ
Sbjct: 237 ESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 296
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE---ADAGGSPSLVARG 285
+G K+ + +D P A +P+ I G + +A +++ +I E AD G RG
Sbjct: 297 TGVKMVMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKEQADFRG-----VRG 350
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKE 344
T++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S E
Sbjct: 351 DFTSRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPE 403
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
R +V G + + A +I E++
Sbjct: 404 RAAQVMGPPDRCQHAAHIISELI 426
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 360 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 416
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 417 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 476
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 477 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 533
>gi|189441939|gb|AAI67653.1| LOC100170586 protein [Xenopus (Silurana) tropicalis]
Length = 449
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 122/235 (51%), Gaps = 36/235 (15%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+M+ + VP+ VG++IG+ G+ I +Q SG K+QI+ D+ P R V + G+
Sbjct: 92 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPE---RVVSLTGSPD 148
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ L++ ++A GG PS + +G+ + EI +P K GLIIG+GGET
Sbjct: 149 SVQKAKMLLDDIVARG-RGGPPSQFHDN--SNGQNGSLQ--EIMIPAGKAGLIIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ G+ +++ A EM+ ++L +
Sbjct: 204 IKQLQERAGVKMILIQ------DGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLRE---- 253
Query: 374 STLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLP 428
QA R GPP +P Q YPQ G P+ PH P P
Sbjct: 254 -------RDQANFDRNEYGPPH-----QYPPQGWGSTYPQWGQPPA--PHDPTKP 294
>gi|390458450|ref|XP_002806580.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Callithrix jacchus]
Length = 773
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 192 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 248
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 249 SIEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 300
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 301 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 350
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 371 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 427
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------------ASGAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ A G +++ VP +
Sbjct: 428 HAAHIINELILTAQERDGFG-------GLAVARGRGRGRGDWSVGAPGGVQEITYTVPAD 480
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E
Sbjct: 481 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDE 539
Query: 366 VLSQT 370
+ T
Sbjct: 540 KVGGT 544
>gi|1575609|gb|AAC50893.1| FUSE binding protein 3, partial [Homo sapiens]
Length = 600
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSSTD--DS 198
F+D +++ K + S V+PS V ++ +D+ + + D +
Sbjct: 45 RGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALDHQRT 104
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 105 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPES 161
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGETI
Sbjct: 162 IEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGETI 213
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 214 KQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 262
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 283 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 339
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 340 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 399
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 400 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 456
>gi|213512410|ref|NP_001133499.1| Far upstream element-binding protein 3 [Salmo salar]
gi|209154246|gb|ACI33355.1| Far upstream element-binding protein 3 [Salmo salar]
Length = 557
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 112/200 (56%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
E++E + + Q+VD ++ S D ++ ++I +P +KVG++IGK GDTI+ LQ
Sbjct: 136 ENIEQAKRLLSQIVDRCRNGPGFHSEMDSNSAIQEILIPASKVGLVIGKGGDTIKQLQER 195
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +L+ +I + D G + +RG
Sbjct: 196 TGVKMMMIQDGPM-PTGADKPLRITGDPYKVQQARELVVEIIRDKDQGDFRA--SRGDFG 252
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G++ +++ VP VG++IGR GE IK +Q SG RIQ P DG S +RI
Sbjct: 253 SRLGGSS--LDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPD-----DGISPDRIA 305
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 306 QVMGQSDRCQHAVHLINELV 325
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 98/171 (57%), Gaps = 15/171 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ M+ +VP+ VG +IG+ G+ I +Q SG KIQI D+ R + G+
Sbjct: 80 AIMTEDFKVPDKMVGFIIGRGGEQITRIQLESGCKIQIAADSGG---MMDRACTLTGSPE 136
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
NI++A++L++ ++ G G + S +A Q EI +P KVGL+IG+GG+T
Sbjct: 137 NIEQAKRLLSQIVDRCRNG-------PGFHSEMDSNSAIQ-EILIPASKVGLVIGKGGDT 188
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I +P G ++ +R+TGD +++ A+E++ E++
Sbjct: 189 IKQLQERTGVKMMMIQDGPMPTG---ADKPLRITGDPYKVQQARELVVEII 236
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q +SG +IQ D P R +++G
Sbjct: 259 SLDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPDDGISPD---RIAQVMGQSDRCQ 315
Query: 261 KAEKLINAVIA---EADAGGSP-----SLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A LIN ++ E D GSP RG A G ++V +P +K GL+IG
Sbjct: 316 HAVHLINELVQTAQERDGFGSPVGPRGRGRGRGDWNMGAPGGLQEVTYSIPADKCGLVIG 375
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGETIK + +SGA ++L P D RI + G +Q+E+A+++I E + +
Sbjct: 376 KGGETIKNINQQSGAHVELQRNPPPNTD-PNVRIFSIRGTHQQMEMARQLIDEKIGASGM 434
Query: 373 PSTLSGGFN 381
S G N
Sbjct: 435 GGNSSFGLN 443
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 122/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSST--DDS 198
E F+D +++ K + S V+PS V ++ +D+ + + +
Sbjct: 17 EGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRA 76
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPES 133
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGETI
Sbjct: 134 IEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQ--------ELLIPASKVGLVIGKGGETI 185
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD ++++A+EM+ E++ +
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQVAREMVLEIIRE 234
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +I+ +I E D G GLA A+ G +++ VP +
Sbjct: 312 HAAHVISELILTAQERDGFG-------GLAVARGRGRGRGDWSVGTPGGIQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D R+ + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PGLRVFTIRGVPQQIEVARHLIDE 423
>gi|426363332|ref|XP_004048795.1| PREDICTED: far upstream element-binding protein 3 [Gorilla gorilla
gorilla]
Length = 572
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNG-------PGFHNDVDSNSTIQ-EILIPASKVGLVIGRGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 234
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 312 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 428
>gi|355567401|gb|EHH23742.1| hypothetical protein EGK_07278, partial [Macaca mulatta]
gi|355752991|gb|EHH57037.1| hypothetical protein EGM_06596, partial [Macaca fascicularis]
Length = 544
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 48 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 104
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 105 SIEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 156
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 157 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 206
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IG+ G+TI+ LQ
Sbjct: 104 ESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 163
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG +
Sbjct: 164 TGVKMVMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RGDFS 220
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 221 SRVGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 273
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 274 QVMGPPDRCQHAAHIISELI 293
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 227 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 283
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 284 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 343
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 344 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 400
>gi|402896286|ref|XP_003911235.1| PREDICTED: far upstream element-binding protein 3 [Papio anubis]
Length = 572
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 234
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 312 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 428
>gi|100816392|ref|NP_003925.1| far upstream element-binding protein 3 [Homo sapiens]
gi|297685554|ref|XP_002820351.1| PREDICTED: far upstream element-binding protein 3 [Pongo abelii]
gi|37078499|sp|Q96I24.2|FUBP3_HUMAN RecName: Full=Far upstream element-binding protein 3;
Short=FUSE-binding protein 3
gi|119608343|gb|EAW87937.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|119608344|gb|EAW87938.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|187950609|gb|AAI37339.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|187951661|gb|AAI37341.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|194379238|dbj|BAG58170.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 234
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 312 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 428
>gi|417403740|gb|JAA48667.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 667
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 120 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 176
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 177 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 228
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 229 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 276
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 176 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 230
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 231 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 287
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 288 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 339
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 340 PDRIAQITGPPDRCQHAAEIITDLL 364
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 301 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 357
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 358 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 417
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 418 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 474
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 125 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 180
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 181 AKRLLDQIVEK 191
>gi|332833136|ref|XP_520317.3| PREDICTED: far upstream element-binding protein 3 [Pan troglodytes]
gi|397503629|ref|XP_003822422.1| PREDICTED: far upstream element-binding protein 3 [Pan paniscus]
gi|410219718|gb|JAA07078.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410292988|gb|JAA25094.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410350985|gb|JAA42096.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
Length = 572
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 234
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 312 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGIQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 428
>gi|332809276|ref|XP_003308215.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|397472596|ref|XP_003807826.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
paniscus]
gi|426330098|ref|XP_004026061.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|194390162|dbj|BAG61843.1| unnamed protein product [Homo sapiens]
Length = 665
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 120 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 176
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 177 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 228
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 229 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 276
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 176 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 230
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 231 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 287
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 288 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 339
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 340 PERIAQITGPPDRCQHAAEIITDLL 364
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 301 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 357
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 358 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 417
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 418 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 474
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 125 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 180
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 181 AKRLLDQIVEK 191
>gi|115533118|ref|NP_001041081.1| Protein C12D8.1, isoform c [Caenorhabditis elegans]
gi|82465146|emb|CAJ43440.1| Protein C12D8.1, isoform c [Caenorhabditis elegans]
Length = 548
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 104/172 (60%), Gaps = 13/172 (7%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
D+ ++ K +P + VG++IG+ G I+ +Q +G ++Q++ DADP + R V + G+
Sbjct: 3 DNEAVNEKYPIPESAVGIVIGRGGSEIQGIQAKAGCRVQMS--PDADPSSGVRMVTLEGS 60
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
SN++ A+ LIN V+A + P G AQ + ++I +P + GLIIG+ G
Sbjct: 61 RSNVETAKHLINEVVARSQ-NPRPQY---GFPRAQTT-----IDIAIPPNRCGLIIGKSG 111
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+TI+ LQ +SG ++ L+ + D SK +R+TGD ++IE+A++++ E+L
Sbjct: 112 DTIRQLQEKSGCKMILVQDNQSVSDQSKP--LRITGDPQKIELAKQLVAEIL 161
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D DP R I+GT I +A
Sbjct: 189 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAVIMGTRDQIYRA 246
Query: 263 EKLINAVIAEADA--GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ I ++ ++ GG ++ A A S A + VP K GL+IG+GGETIK
Sbjct: 247 TERITELVKKSTMQQGGGGNV-----AGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQ 301
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ + SGA +L P G+ + E++ + G R IE A+ +I+
Sbjct: 302 INSESGAHCEL--SRDPTGN-ADEKVFVIKGGKRAIEHAKHLIR 342
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I +P N+ G++IGK+GDTIR LQ SG K+ + +D + ++P+ I G I+ A+
Sbjct: 96 IAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQD-NQSVSDQSKPLRITGDPQKIELAK 154
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ ++ G S + + GA+ + E+ VP VG+IIG+ G+TIK L
Sbjct: 155 QLVAEILNSGGDGNGGSGL-QMHHAGGGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAM 213
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+G +IQ P P + ER + G QI A E I E+ V+ ST+ G
Sbjct: 214 ETGTKIQFKPDDDPS---TPERCAVIMGTRDQIYRATERITEL----VKKSTMQQG 262
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
+P VG++IGRGG I+G+Q ++G R+Q+ P P S R+V + G +E A+
Sbjct: 13 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPS---SGVRMVTLEGSRSNVETAKH 69
Query: 362 MIKEVLSQTVRP 373
+I EV++++ P
Sbjct: 70 LINEVVARSQNP 81
>gi|383873059|ref|NP_001244672.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|380787701|gb|AFE65726.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|383414151|gb|AFH30289.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|384950158|gb|AFI38684.1| far upstream element-binding protein 3 [Macaca mulatta]
Length = 572
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 234
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IG+ G+TI+ LQ
Sbjct: 132 ESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 191
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG +
Sbjct: 192 TGVKMVMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RGDFS 248
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 249 SRVGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 301
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 302 QVMGPPDRCQHAAHIISELI 321
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 312 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 428
>gi|390466103|ref|XP_003733520.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Callithrix jacchus]
gi|395821884|ref|XP_003784260.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Otolemur garnettii]
gi|403257698|ref|XP_003921435.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410967580|ref|XP_003990296.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Felis
catus]
Length = 665
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 120 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 176
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 177 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 228
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 229 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 276
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 176 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 230
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 231 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 287
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 288 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 339
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 340 PDRIAQITGPPDRCQHAAEIITDLL 364
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 301 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 357
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 358 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 417
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 418 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 474
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 125 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 180
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 181 AKRLLDQIVEK 191
>gi|426215782|ref|XP_004002148.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Ovis
aries]
Length = 665
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 120 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 176
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 177 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 228
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 229 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 276
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 176 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 230
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 231 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 287
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 288 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 339
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 340 PDRIAQITGPPDRCQHAAEIITDLL 364
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 301 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 357
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 358 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 417
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 418 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 474
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 125 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 180
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 181 AKRLLDQIVEK 191
>gi|348668189|gb|EGZ08013.1| hypothetical protein PHYSODRAFT_339892 [Phytophthora sojae]
Length = 644
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 101/186 (54%), Gaps = 12/186 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S+D + S ++VP VG +IG+ G+TIR LQ SGA IQI R+ + P R V
Sbjct: 183 PGSSDGQS-SYDMKVPRELVGYIIGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVN 241
Query: 252 IIGTLSNIDKAEKLINAVIAEAD----AGGSPSLVARGLATAQASG----AAEQVEIKVP 303
I G +D A++LI +I E AGG R A+ G + VE+ VP
Sbjct: 242 ITGNQDALDLAQRLIQNLIDERQQNQGAGGFRERDDRD-RMARYGGINPDGTDSVELLVP 300
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
NE+VGLIIGRGG TIK +Q R+G + IPQ P+ + R++ + G M E A+ I
Sbjct: 301 NERVGLIIGRGGCTIKAIQQRTGTSVT-IPQ-TPDPNHPDMRLITIRGTMEAKEAAKFEI 358
Query: 364 KEVLSQ 369
++++
Sbjct: 359 HSMINE 364
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSST--DDS 198
E F+D +++ K + S V+PS V ++ +D+ + + +
Sbjct: 17 EGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRALDDGVGNQLGALVHQRA 76
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPES 133
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGETI
Sbjct: 134 IEQAKRLLGQIVDRCRNGPGFHNDMDGNSTIQ--------ELLIPASKVGLVIGKGGETI 185
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD----AGGSPSLVARGLATAQAS----GAAEQVEIKVPNEKVGLIIG 312
A +IN +I A GG RG + S G +++ VP +K GL+IG
Sbjct: 312 HAAPIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +Q+E+A+ +I E
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQMEVARHLIDE 423
>gi|440898065|gb|ELR49638.1| Far upstream element-binding protein 1 [Bos grunniens mutus]
Length = 675
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 130 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 186
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 187 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 238
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 239 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 286
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 186 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 240
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 241 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 297
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 298 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 349
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 350 PDRIAQITGPPDRCQHAAEIITDLL 374
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 311 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 367
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRG- 314
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 368 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGR 427
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 428 GETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 485
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 135 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 190
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 191 AKRLLDQIVEK 201
>gi|440894384|gb|ELR46853.1| Far upstream element-binding protein 3, partial [Bos grunniens
mutus]
Length = 542
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 48 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 104
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 105 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQ--------EIPIPASKVGLVIGKGGET 156
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 157 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 206
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 104 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQEIPIPASKVGLVIGKGGETIKQLQER 163
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG +
Sbjct: 164 TGVKMVMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RGDFS 220
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 221 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 273
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 274 QVMGPPDRCQHAAHVISELI 293
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 227 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 283
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +I+ +I E D G GLA A+ G ++V VP +
Sbjct: 284 HAAHVISELILTAQERDGFG-------GLAVARGRGRGRGDWSVGTPGGIQEVTYTVPAD 336
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G QIE+A+ +I E
Sbjct: 337 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTD-PNLRIFTIRGLPPQIEVARHLIDE 395
Query: 366 VLSQT 370
+ T
Sbjct: 396 KVGGT 400
>gi|56090186|ref|NP_001007777.1| far upstream element-binding protein 3 [Danio rerio]
gi|55715803|gb|AAH85379.1| Zgc:101598 [Danio rerio]
Length = 572
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ S D S+ ++I +P +KVG++IGK GDTI+ LQ
Sbjct: 138 ESIEQAKRLLGQIVDRCRNGPGFHSQMDGSSAVQEILIPASKVGLVIGKGGDTIKQLQER 197
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D D P + +P+ I G + +A +L+ +I E D G R +
Sbjct: 198 TGVKMIMIQD-DPMPTGSDKPLRISGDPYKVQQARELVVEIIREKDQGD-----FRSGRS 251
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
S +++ VP VG++IGR GE IK +Q +G RIQ P DG S +R+
Sbjct: 252 DFGSRLGSSIDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPDRVA 306
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 307 QVMGQPERCQHAVHLINELV 326
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ +VP+ VG +IG+ G+ I +Q S KIQI D+ RP + GT
Sbjct: 82 AIITEDFKVPDKMVGFIIGRGGEQITRIQLESNCKIQIAADSGG---MMDRPCTLTGTPE 138
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G P +Q G++ EI +P KVGL+IG+GG+T
Sbjct: 139 SIEQAKRLLGQIVDRCRNG--PGF------HSQMDGSSAVQEILIPASKVGLVIGKGGDT 190
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I +P G ++ +R++GD +++ A+E++ E++ +
Sbjct: 191 IKQLQERTGVKMIMIQDDPMPTG---SDKPLRISGDPYKVQQARELVVEIIRE 240
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 260 SIDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPD---RVAQVMGQPERCQ 316
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIG 312
A LIN ++ A + G ++V +P +K GL+IG
Sbjct: 317 HAVHLINELVQTAQERDGFGGPLGPRGRGRGRGDWNIGTPGGLQEVTYTIPADKCGLVIG 376
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+GGETIK + +SGA ++L P D R + G +Q+E+A+++I + +
Sbjct: 377 KGGETIKNINQQSGAHVELQRNPPPNTD-PNVRTFSIRGSPQQMEMARQLIDDKI 430
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD--ADADPHAATRPVEIIGTLSNIDKAE 263
+P +K G++IGK G+TI+ + SGA +++ R+ + DP+ R I G+ ++ A
Sbjct: 366 IPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPN--VRTFSIRGSPQQMEMAR 423
Query: 264 KLINAVIAEADAGGSPSL 281
+LI+ I + GG+ S
Sbjct: 424 QLIDDKIGASGMGGNSSF 441
>gi|359319788|ref|XP_003639165.1| PREDICTED: far upstream element-binding protein 1-like [Canis lupus
familiaris]
Length = 663
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|155372155|ref|NP_001094687.1| far upstream element-binding protein 3 [Bos taurus]
gi|151554191|gb|AAI49199.1| FUBP3 protein [Bos taurus]
gi|296482076|tpg|DAA24191.1| TPA: far upstream element (FUSE) binding protein 3 [Bos taurus]
Length = 572
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQ--------EIPIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +I+ +I E D G GLA A+ G ++V VP +
Sbjct: 312 HAAHVISELILTAQERDGFG-------GLAVARGRGRGRGDWSVGTPGGIQEVTYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTD-PNLRIFTIRGLPPQIEVARHLIDE 423
Query: 366 VLSQT 370
+ T
Sbjct: 424 KVGGT 428
>gi|417403610|gb|JAA48604.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 647
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 319 PDRIAQITGPPDRCQHAAEIITDLL 343
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSST--DDS 198
E F+D +++ K + S V+PS V ++ +D+ + + +
Sbjct: 17 EGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRALDDGVGNQLGALVHQRA 76
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPES 133
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGETI
Sbjct: 134 IEQAKRLLGQIVDRCRNGPGFHNDMDGNSTIQ--------ELLIPASKVGLVIGKGGETI 185
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD----AGGSPSLVARGLATAQAS----GAAEQVEIKVPNEKVGLIIG 312
A ++IN +I A GG RG + S G +++ VP +K GL+IG
Sbjct: 312 HAARIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +Q+E+A+ +I E
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQMEVARHLIDE 423
>gi|391338140|ref|XP_003743419.1| PREDICTED: far upstream element-binding protein 3-like, partial
[Metaseiulus occidentalis]
Length = 502
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 110/182 (60%), Gaps = 24/182 (13%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+++S + VP+ VG++IG+ G I LQ+ + K+Q++ +++ P RP +IGT
Sbjct: 91 NSVSEEWSVPDKMVGLIIGRDGKQISRLQHETSCKVQLSSESNGTPE---RPCVLIGTKQ 147
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAA-------EQVE-IKVPNEKVGL 309
++KA+++I+A L++RG T+ +G+ E VE + P K GL
Sbjct: 148 AVEKAKEMISA------------LISRGQETSHKAGSMNGGPGQGEIVEDMPCPASKAGL 195
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IGR GETI+ LQ+R+G ++ L+ Q P + E+ +R+TG+ ++E+A++MI++++S
Sbjct: 196 VIGRNGETIRNLQSRAGVKMVLL-QDNPGNSPNAEKPIRITGEPHKVELAKKMIRDLISG 254
Query: 370 TV 371
++
Sbjct: 255 SL 256
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
P +K G++IG+ G+TIR LQ +G K+ + +D + A +P+ I G ++ A+K+
Sbjct: 188 CPASKAGLVIGRNGETIRNLQSRAGVKMVLLQDNPGNSPNAEKPIRITGEPHKVELAKKM 247
Query: 266 INAVIA------EADAGGSPSLVARGLATAQASG---------AAEQVEIKVPNEKVGLI 310
I +I+ S + RG S + Q ++ VP + VG++
Sbjct: 248 IRDLISGSLQNGGGGGRFGGSHMDRGFPGVGGSMGPTPVPGEPGSMQEQLLVPQQAVGVV 307
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IG+ GE IK +Q +GAR+Q Q P+ + +RI +TG Q+ A I ++++
Sbjct: 308 IGKHGEMIKRIQHETGARVQF--QGTPD-ETHPDRICVITGQSNQVLGACSKISDLITSV 364
Query: 371 VRPSTLSGG 379
++ GG
Sbjct: 365 LQRDDEIGG 373
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 46/208 (22%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG---- 254
+M ++ VP VGV+IGK G+ I+ +Q+ +GA++Q D R I G
Sbjct: 292 SMQEQLLVPQQAVGVVIGKHGEMIKRIQHETGARVQF--QGTPDETHPDRICVITGQSNQ 349
Query: 255 TLSNIDKAEKLINAVIAEAD-AGGSPSLVARGLATAQA---------------------- 291
L K LI +V+ D GG + RG +
Sbjct: 350 VLGACSKISDLITSVLQRDDEIGGHTFGLGRGALSRGGGRGAGRGGFRGGRGGGRGGPMS 409
Query: 292 ------------SGAAEQVEIK--VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
+G ++ EI+ VP K GL+IG+GGETI+ + S A ++L P
Sbjct: 410 GMGGPMSGLSSPTGLPDETEIQYPVPASKCGLVIGKGGETIRSIMNASRAYVELCRVADP 469
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+ +R + G + IE A+++I E
Sbjct: 470 N---AADRFFIIRGSPQSIESARQLISE 494
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP +K G++IGK G+TIR + S A +++ R ADP+AA R I G+ +I+ A +L
Sbjct: 434 VPASKCGLVIGKGGETIRSIMNASRAYVELCR--VADPNAADRFFIIRGSPQSIESARQL 491
Query: 266 INAVIAEAD 274
I+ I A+
Sbjct: 492 ISEKIGSAN 500
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSST--DDS 198
E F+D +++ K + S V+PS V ++ +D+ + + +
Sbjct: 17 EGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRA 76
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPE---RPCVLTGTPES 133
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETI
Sbjct: 134 IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGETI 185
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ G +++ VP +
Sbjct: 312 HAAHVINELILTAQERDGFG-------GLAVARGRGRGRGDWSMGTPGGIQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGIPQQIEVARHLIDE 423
Query: 366 VLSQT 370
+ T
Sbjct: 424 KVGGT 428
>gi|311259162|ref|XP_003127965.1| PREDICTED: far upstream element-binding protein 1 [Sus scrofa]
gi|426215778|ref|XP_004002146.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Ovis
aries]
Length = 644
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 319 PDRIAQITGPPDRCQHAAEIITDLL 343
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|410033139|ref|XP_003949493.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|426330100|ref|XP_004026062.1| PREDICTED: far upstream element-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 655
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 319 PERIAQITGPPDRCQHAAEIITDLL 343
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSST--DDS 198
E F+D +++ K + S V+PS V ++ +D+ + + +
Sbjct: 17 EGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRA 76
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPES 133
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETI
Sbjct: 134 IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTVQ--------EILIPASKVGLVIGKGGETI 185
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 26/180 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ G +++ VP +
Sbjct: 312 HAAHIINELILTAQERDGFG-------GLAVARGRGRGRGDWSMGTPGGIQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D S R+ + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSL-RVFTIRGVPQQIEVARHLIDE 423
>gi|417403606|gb|JAA48602.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 646
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 319 PDRIAQITGPPDRCQHAAEIITDLL 343
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|390466101|ref|XP_002751042.2| PREDICTED: far upstream element-binding protein 1 isoform 1
[Callithrix jacchus]
gi|395821882|ref|XP_003784259.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Otolemur garnettii]
gi|403257696|ref|XP_003921434.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410967576|ref|XP_003990294.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Felis
catus]
Length = 644
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 319 PDRIAQITGPPDRCQHAAEIITDLL 343
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|301773894|ref|XP_002922363.1| PREDICTED: far upstream element-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 646
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|410967578|ref|XP_003990295.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Felis
catus]
Length = 655
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 319 PDRIAQITGPPDRCQHAAEIITDLL 343
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|119626763|gb|EAX06358.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Homo
sapiens]
Length = 656
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 319 PERIAQITGPPDRCQHAAEIITDLL 343
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRG- 314
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGR 396
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 GETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 454
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|116003917|ref|NP_001070314.1| far upstream element-binding protein 1 [Bos taurus]
gi|115305288|gb|AAI23717.1| Far upstream element (FUSE) binding protein 1 [Bos taurus]
Length = 643
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|395730346|ref|XP_002810731.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Pongo abelii]
Length = 667
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 318 PERIAQITGPPDRCQHAAEIITDLL 342
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|338725292|ref|XP_001496721.3| PREDICTED: far upstream element-binding protein 1 [Equus caballus]
Length = 644
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|291398647|ref|XP_002715950.1| PREDICTED: far upstream element-binding protein [Oryctolagus
cuniculus]
Length = 643
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|212723168|ref|NP_001132504.1| uncharacterized protein LOC100193964 [Zea mays]
gi|194694564|gb|ACF81366.1| unknown [Zea mays]
Length = 430
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 178/427 (41%), Gaps = 95/427 (22%)
Query: 340 DGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSGGFNQQAYRPRVPTGPPQWGP 398
DG ++ + I + + L QT R + SGG+ Q YRP+ QWGP
Sbjct: 16 DGFLLQLALCFSAVSVIYFSFWFLTWFLVQTFSRHTNQSGGYGPQGYRPQGQGAASQWGP 75
Query: 399 RGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPPQQMAPRSNYG-----GPPNMQGAA 453
R SQ Y YP RG P QN Y + PYG+YP QQ PR G GPP
Sbjct: 76 R----SQNHGYGYPPRGMPPPQN--Y-NTPYGSYPLQQGPPRGGMGWDQRQGPPPHPSYQ 128
Query: 454 GGYDYYGGQGGHVSD-RPVSVSHSTSIPGHPSVPAQAPAGGPPPSQANYN-YGQPHTSEY 511
GG Y QG D +P S PP NYN YGQ Y
Sbjct: 129 GGASDYYKQGSQPYDSQPPSY---------------------PPGPGNYNSYGQSQGPNY 167
Query: 512 GHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPVYSQ--GGLQSGYHQH--QYGK 567
G Q Y APQQ Y HGY D Y +Q Y Q G Q GY Q Y +
Sbjct: 168 GQPQ-YPQHAPQQNYSHGYGDPR------YNAPPPNQQYYGQPPMGPQQGYPQQPDPYAR 220
Query: 568 PPYGMPAQGTQPQSYGPPRPGQPGDIPPYQSQVPSAQSYGPNVPHQQQYPYATSGPT--- 624
PPY P Q PPR G P YQ+ A SYGP H Y S T
Sbjct: 221 PPYSGPGQ-------WPPR-GAPAADGSYQA---PAASYGPPSQHPSAYGQTYSAATGSD 269
Query: 625 ----QQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAG 680
Q G APAP Y Q +APGYPQQ G G
Sbjct: 270 GYAQQGYPQQGGQAPAP--YGQSAPAAPGYPQQQG------------------------G 303
Query: 681 YGQYTNTQQAYPEQPATSNAGYGYQGT-QDPSYGSSAPGSAYAAP---TGQPGYAQPAAT 736
Y QY TQ AY EQ A +NA YGYQG DP+YGS+ P Y P TGQ GYA AA+
Sbjct: 304 YAQYPQTQPAYGEQAAQTNASYGYQGAPADPNYGSAYPQPGYGPPGQATGQAGYASSAAS 363
Query: 737 QPSYDQS 743
QP+Y Q+
Sbjct: 364 QPAYGQA 370
>gi|194382840|dbj|BAG64590.1| unnamed protein product [Homo sapiens]
Length = 629
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 318 PERIAQITGPPDRCQHAAEIITDLL 342
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E +
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKI 446
>gi|17402900|ref|NP_003893.2| far upstream element-binding protein 1 [Homo sapiens]
gi|332809274|ref|XP_513511.3| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
troglodytes]
gi|397472594|ref|XP_003807825.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Pan
paniscus]
gi|426330096|ref|XP_004026060.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|116241370|sp|Q96AE4.3|FUBP1_HUMAN RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1; AltName: Full=DNA helicase
V; Short=hDH V
gi|17158056|gb|AAA17976.2|AAA17976 FUSE binding protein [Homo sapiens]
gi|119626761|gb|EAX06356.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Homo
sapiens]
gi|380817628|gb|AFE80688.1| far upstream element-binding protein 1 [Macaca mulatta]
gi|410225756|gb|JAA10097.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410258414|gb|JAA17174.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410301636|gb|JAA29418.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410331317|gb|JAA34605.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
Length = 644
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 319 PERIAQITGPPDRCQHAAEIITDLL 343
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|426215780|ref|XP_004002147.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Ovis
aries]
Length = 655
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 319 PDRIAQITGPPDRCQHAAEIITDLL 343
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|383422519|gb|AFH34473.1| far upstream element-binding protein 1 [Macaca mulatta]
Length = 643
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 318 PERIAQITGPPDRCQHAAEIITDLL 342
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|325191228|emb|CCA26015.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 534
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D + + ++ VP VG +IG+ G+TIR LQ SGA IQI R+ + R V I GT
Sbjct: 165 DGSQAYQMPVPRTYVGYIIGRGGETIRDLQARSGAHIQIVREEEGAAFTPDRFVSIAGTE 224
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR-GLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
++ A+KLI ++ E +GG AR G + S E +EI VPN++VGL+IGRGG
Sbjct: 225 EAVESAKKLIQNLLDERASGGGSGDDARYGGSNPDGS---ETLEILVPNDRVGLVIGRGG 281
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
TI+ +Q R+G I +PQ P+ R + V G M + A+ I ++ +
Sbjct: 282 ATIRSIQVRTGTNI-TVPQ-TPDATNPTMRKITVKGTMEAKDAAKNEILGLIQE 333
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 32/229 (13%)
Query: 170 EESVEPSNVVPQQVVDNSKSDDPSSTD--------DSTMSRKIEVPNNKVGVLIGKAGDT 221
EE+VE + + Q ++D S S D D + + +I VPN++VG++IG+ G T
Sbjct: 224 EEAVESAKKLIQNLLDERASGGGSGDDARYGGSNPDGSETLEILVPNDRVGLVIGRGGAT 283
Query: 222 IRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSL 281
IR +Q +G I + + DA + R + + GT+ D A+ I +I E + GS
Sbjct: 284 IRSIQVRTGTNITVPQTPDA-TNPTMRKITVKGTMEAKDAAKNEILGLIQENNNTGST-- 340
Query: 282 VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
+ ++VPN++VG++IG+ GETIKG+Q R+ R+Q IPQ G
Sbjct: 341 ----------------IYMQVPNDRVGVVIGKKGETIKGIQDRNTVRVQ-IPQVPDVGSN 383
Query: 342 SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVP 390
R + + G ++ A+E I V+ Q + G++Q A P+ P
Sbjct: 384 PPVRTISIHGAPESLQRAKEEIDSVILQGAGQT----GYDQYATDPQYP 428
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 189 SDDPSSTDDSTMSRKIEVPNNK------VGVLIGKAGDTIRYLQYNSGAKIQI-----TR 237
S+DP++ +K+ +P +K +G+LIG G + ++ SGAKI I ++
Sbjct: 35 SEDPTA---EKKRKKVYIPVDKYPDINFMGLLIGPRGSNQKRMEDESGAKILIRGKGSSK 91
Query: 238 DADADPHAATRPVEIIGTLSN--IDKAEKLINAVIAE-ADAGGSPSLVARGLATAQASGA 294
DA +P +I S I +A+ I ++ A R +A + +G
Sbjct: 92 DAFGEPDENDDLHVLITADSEEAIARAQASIEEILFNPQQAMKLKQEQLRKVAELKGAGV 151
Query: 295 ---------------AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEG 339
++ ++ VP VG IIGRGGETI+ LQ RSGA IQ++ + EG
Sbjct: 152 DGNEFGHYGPGSADGSQAYQMPVPRTYVGYIIGRGGETIRDLQARSGAHIQIVREE--EG 209
Query: 340 DG-SKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+ +R V + G +E A+++I+ +L +
Sbjct: 210 AAFTPDRFVSIAGTEEAVESAKKLIQNLLDE 240
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 104/173 (60%), Gaps = 22/173 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP+N VG++IG+ G+ I LQ +G KIQ+ ++ P R + G+ +++A+
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPE---RLCTLTGSREAVNRAK 168
Query: 264 KLINAVIAE-------ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+L+ +++ + D GGS GL + VEI +P KVGLIIG+GGE
Sbjct: 169 ELVLSIVNQRSRTEGIGDMGGSSG----GLMSHSGF-----VEIMIPGPKVGLIIGKGGE 219
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ +SGA++ +I Q P + +E+ +R+TGD +++E A++++ E++++
Sbjct: 220 TIKQLQEKSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEYAKQLVYELIAE 269
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 22/183 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 202 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQE--KPLRITGDPQKVEYA 259
Query: 263 EKLINAVIAEADAGGSPSLVARGL-------------ATAQASGAAEQVEIKVPNEKVGL 309
++L+ +IAE + + RG + SG + VE+ VP VG+
Sbjct: 260 KQLVYELIAEKEM----QMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVGV 315
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IG+GG+ IK +Q +GAR+Q Q E DG +R V+G + +E ++ I+E++
Sbjct: 316 VIGKGGDMIKKIQAETGARVQF--QQGRE-DGPGDRKCIVSGKHQAVEQVRQRIQELIDS 372
Query: 370 TVR 372
+R
Sbjct: 373 VMR 375
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 41/250 (16%)
Query: 189 SDDPSSTDDSTMSRKIEV--PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S+D S S + +EV P VGV+IGK GD I+ +Q +GA++Q + + P
Sbjct: 289 SNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGP--G 346
Query: 247 TRPVEIIGTLSNID----KAEKLINAVIAEADAGGSPSLVAR------------------ 284
R + G ++ + ++LI++V+ D G ++ AR
Sbjct: 347 DRKCIVSGKHQAVEQVRQRIQELIDSVMRRDD--GRSNIGARSGPRGNGFGNNRNPNEYG 404
Query: 285 GLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS 342
G Q +++E VP+ K G+IIG+GGETIK + ++GA +L ++
Sbjct: 405 GWDRRQGGPMQDKIETMFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSN---E 461
Query: 343 KERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPP--QWGPRG 400
E+I + G+ Q+E A+ + E L ++ +G Y P G W
Sbjct: 462 NEKIFIIRGNPEQVEHAKRIFSEKLGMAPANTSFTGTQGAIGYNPTWNAGTAYQAW---- 517
Query: 401 SHPSQPMAYD 410
P+QP D
Sbjct: 518 --PNQPQTTD 525
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I+VP+ VGLIIGRGGE I LQ+ +G +IQ+ PE G ER+ +TG +
Sbjct: 111 DIRVPDNMVGLIIGRGGEQITRLQSETGCKIQM----APESGGLPERLCTLTGSREAVNR 166
Query: 359 AQEMIKEVLSQTVR 372
A+E++ +++Q R
Sbjct: 167 AKELVLSIVNQRSR 180
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSST--DDS 198
E F+D +++ K + S V+PS V ++ +D+ + + +
Sbjct: 17 EGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRALDDGVGNQLGALVHQRA 76
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPES 133
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGETI
Sbjct: 134 IEQAKRLLGQIVDRCRNGPGFHNDMDGNSTIQ--------ELLIPASKVGLVIGKGGETI 185
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 186 KQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD----AGGSPSLVARGLATAQAS----GAAEQVEIKVPNEKVGLIIG 312
A ++IN +I A GG RG + S G +++ VP +K GL+IG
Sbjct: 312 HAARIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +Q+E+A+ +I E
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQMEVARHLIDE 423
>gi|354468080|ref|XP_003496495.1| PREDICTED: far upstream element-binding protein 1-like [Cricetulus
griseus]
Length = 649
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 105 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 161
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 162 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 213
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 214 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 261
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 161 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 215
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 216 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 272
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 273 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 324
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 325 PDRIAQITGPPDRCQHAAEIITDLL 349
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 286 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 342
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 343 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 402
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 403 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 459
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 16/192 (8%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
+ N D+ S++S + VP+ VG++IG+ G+ I LQ SG KIQI +D+ P
Sbjct: 109 LGNGNQDEFERPGQSSLSEEYAVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSGGLP 168
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVI--AEADAGGSPSLVARGLATAQASGAAEQVEIK 301
R + G I++A+ LI+ +I + A GS + G T +E+
Sbjct: 169 D---RMCTLTGNPQAIERAKALIDRIIERGQGPAVGSDGGLGDGNTT---------IELM 216
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
+P+ KVGL+IG+GGE IK LQ R+G ++ +I G+ ++ +RV+GD ++ + A+E
Sbjct: 217 IPSNKVGLVIGKGGEMIKKLQERAGVKMVMIQDATTS--GTSDKPLRVSGDPQKCKHARE 274
Query: 362 MIKEVLSQTVRP 373
++ E++ P
Sbjct: 275 LVNELIGDKDNP 286
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D + ++ +P+NKVG++IGK G+ I+ LQ +G K+ + +DA + +P+ + G
Sbjct: 208 DGNTTIELMIPSNKVGLVIGKGGEMIKKLQERAGVKMVMIQDATTS-GTSDKPLRVSGDP 266
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR------------------------GLATAQAS 292
A +L+N +I + D G R G
Sbjct: 267 QKCKHARELVNELIGDKDNPGMEMFGERMDGGYDRERDDDRDFERRGGRGDYGPRMGGPP 326
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIVRVTG 351
G E+ VP VG++IGRGG+ IK +Q +GARIQ P DG S ER+ ++G
Sbjct: 327 GGGGGFEMLVPRFAVGIVIGRGGDMIKKIQNETGARIQFRPD-----DGHSPERLAVISG 381
Query: 352 DMRQIEIAQEMIKEVL 367
+I+ A+E I E++
Sbjct: 382 SDDKIDHAREKIDELI 397
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IG+ GD I+ +Q +GA+IQ D D H+ R I G+ ID A
Sbjct: 333 EMLVPRFAVGIVIGRGGDMIKKIQNETGARIQFRPD---DGHSPERLAVISGSDDKIDHA 389
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATAQASGA-----AEQVEIKV 302
+ I+ +I A G P + V
Sbjct: 390 REKIDELIDSARQKDEQRRQGGGRDRGFGPPPHREGGRGGGGGGFRGGPPDRMDSTTFTV 449
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
P+ K GL+IG+GGETI+ + +SGA ++L P G E++ + G +QI AQ++
Sbjct: 450 PSSKCGLVIGKGGETIRNINMQSGAHVELSRNLGPPG----EKVFTIRGSPQQISCAQQL 505
Query: 363 IKEVLS 368
I E +S
Sbjct: 506 IHEKVS 511
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
P D +T + VP++K G++IGK G+TIR + SGA ++++R+
Sbjct: 439 PDRMDSTTFT----VPSSKCGLVIGKGGETIRNINMQSGAHVELSRN 481
>gi|355558120|gb|EHH14900.1| hypothetical protein EGK_00902 [Macaca mulatta]
gi|355761156|gb|EHH61761.1| hypothetical protein EGM_19848 [Macaca fascicularis]
Length = 654
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 318
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 319 PERIAQITGPPDRCQHAAEIITDLL 343
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 336
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 337 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 396
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|297278996|ref|XP_001103908.2| PREDICTED: far upstream element-binding protein 1 [Macaca mulatta]
gi|402855025|ref|XP_003892147.1| PREDICTED: far upstream element-binding protein 1 [Papio anubis]
gi|16878077|gb|AAH17247.1| FUBP1 protein [Homo sapiens]
gi|123998487|gb|ABM86845.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
gi|157929090|gb|ABW03830.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
Length = 653
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 318 PERIAQITGPPDRCQHAAEIITDLL 342
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|395536741|ref|XP_003770370.1| PREDICTED: far upstream element-binding protein 1 [Sarcophilus
harrisii]
Length = 621
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 76 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 133 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 185 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 232
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 132 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 186
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 187 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 243
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 244 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 295
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 296 PDRIAQITGPPDRCQHAAEIITDLL 320
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 257 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 313
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 314 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGSWSMGPPGGLQEFNFIVPTGKTGLIIGKGG 373
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 374 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 430
>gi|341899632|gb|EGT55567.1| hypothetical protein CAEBREN_19643 [Caenorhabditis brenneri]
Length = 592
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 104/179 (58%), Gaps = 20/179 (11%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P D+ ++ K +P VG++IGK G I+ +Q +G ++Q++ D+D ++ R V
Sbjct: 43 PFMDDNQHVNEKYPIPETSVGIVIGKGGSEIQGIQAKAGCRVQMSSDSD---NSGNRMVT 99
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR---GLATAQASGAAEQVEIKVPNEKVG 308
+ G N+++A+ LIN V+A S AR G AQ + V+I +P + G
Sbjct: 100 LEGARCNVEQAKILINEVVAR-------SQTARPQYGFPRAQNT-----VDILIPPNRCG 147
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LIIG+ GETI+ LQ +SG ++ L+ ++ D +K +R+TGD ++IE A++++ E+L
Sbjct: 148 LIIGKSGETIRQLQEKSGCKMILVQENQSVSDQAKP--LRITGDPQKIEHAKQLVSEIL 204
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D DP R I+GT I +A
Sbjct: 237 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAIIMGTRDQIYRA 294
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I ++ + + + G S + + VP K GL+IG+GGETIK +
Sbjct: 295 TERITELVKK--SASQQGGMGGGNMPGSVSNDSAPFYMSVPAAKCGLVIGKGGETIKQIN 352
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK---------------EVL 367
+ SGA +L E G+ E++ + G RQIE A+ +I+ V+
Sbjct: 353 SESGAHCEL----NREATGTDEKVFIIKGGKRQIEHAKHLIRIKVGDIPPNTPFRDDSVM 408
Query: 368 S-QTVRPSTLSGGF-NQQAYRP 387
S QT P++ GGF QQ + P
Sbjct: 409 SMQTAYPASAQGGFAAQQQWNP 430
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 172 SVEPSNVVPQQVVDNSKSDDPS-STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSG 230
+VE + ++ +VV S++ P + + I +P N+ G++IGK+G+TIR LQ SG
Sbjct: 106 NVEQAKILINEVVARSQTARPQYGFPRAQNTVDILIPPNRCGLIIGKSGETIRQLQEKSG 165
Query: 231 AKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLV-------- 282
K+ + ++ + A +P+ I G I+ A++L++ ++ G S +
Sbjct: 166 CKMILVQENQSVSDQA-KPLRITGDPQKIEHAKQLVSEILNSGGDGNGGSGLQMHHGGGG 224
Query: 283 -ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
G TA A G E+ VP VG+IIG+ G+TIK L +G +IQ P P
Sbjct: 225 GGVGGGTASARG-----EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPS--- 276
Query: 342 SKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+ ER + G QI A E I E++ ++
Sbjct: 277 TPERCAIIMGTRDQIYRATERITELVKKS 305
>gi|119626762|gb|EAX06357.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 654
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 318 PERIAQITGPPDRCQHAAEIITDLL 342
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRG- 314
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGR 395
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 GETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 453
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT
Sbjct: 62 AVITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPE---RPCVLTGTPE 118
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 119 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGET 170
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I +P G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 171 IKQLQERTGVKMIMIQDGPMPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 220
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 118 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 177
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 178 TGVKMIMIQDGPM-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RNDFS 234
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 235 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERVA 287
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 288 QVMGLPDRCQHAAHIISELI 307
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 241 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RVAQVMGLPDRCQ 297
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I E D GS ++ + G +++ VP +K GL+IG
Sbjct: 298 HAAHIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLVIG 357
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E + T
Sbjct: 358 KGGENIKSINQQSGAHVELQRNPPPNTD-PGVRIFTIRGVPQQIELARHLIDEKVGGTSM 416
Query: 373 PSTLSGG---FNQQAYRPRVPTGPPQWGPR 399
G FNQ PT P Q GP+
Sbjct: 417 GGPGGFGQSPFNQ------APTTPHQNGPQ 440
>gi|449478185|ref|XP_002195336.2| PREDICTED: far upstream element-binding protein 3 [Taeniopygia
guttata]
Length = 558
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT
Sbjct: 113 AVITEEFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPE---RPCVLTGTPE 169
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 170 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGET 221
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 222 IKQLQERTGVKMIMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 271
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 169 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 228
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 229 TGVKMIMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RSDFS 285
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
A+ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 286 ARMGGGS--IEVSVPRYAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISTERVA 338
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 339 QVMGLPDRCQHAAHIISELI 358
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D D + R +++G
Sbjct: 292 SIEVSVPRYAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISTERVAQVMGLPDRCQ 348
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I E D G+ ++ + G +++ VP +K GL+IG
Sbjct: 349 HAAHIISELILTAQERDGFGNLAIARGRGRGRGDWSVGTPGGVQEITYTVPADKCGLVIG 408
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 409 KGGENIKSINQQSGAHVELQRNPPPNTD-PGVRIFTIRGVPQQIELARHLIDE 460
>gi|344278782|ref|XP_003411171.1| PREDICTED: far upstream element-binding protein 1 [Loxodonta
africana]
Length = 642
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 97 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 153
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 154 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 205
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 206 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 253
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 153 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 207
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 208 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 264
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 265 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 316
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 317 PDRIAQITGPPDRCQHAAEIITDLL 341
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 278 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 334
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 335 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 394
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 395 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 451
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 102 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 157
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 158 AKRLLDQIVEK 168
>gi|74198585|dbj|BAE39771.1| unnamed protein product [Mus musculus]
Length = 654
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 95 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 151
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 152 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 204 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 251
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 151 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 205
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 206 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 262
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G IQ P DG+
Sbjct: 263 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVGIQFKPD-----DGTT 314
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 315 PDRIAQITGPPDRCQHAAEIITDLL 339
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G IQ D P R +I G A
Sbjct: 276 VPIPRFAVGIVIGRNGEMIKKIQNDAGVGIQFKPDDGTTPD---RIAQITGPPDRCQHAA 332
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 333 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 392
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 393 ETIKSISQQSGARIELQRSPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 449
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 100 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 155
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 156 AKRLLDQIVEK 166
>gi|281349073|gb|EFB24657.1| hypothetical protein PANDA_011323 [Ailuropoda melanoleuca]
Length = 568
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 11 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 67
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 68 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 119
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 120 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 167
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 67 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 121
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 122 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 178
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 179 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 230
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 231 PDRIAQITGPPDRCQHAAEIITDLL 255
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 192 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 248
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRG- 314
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 249 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGR 308
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 309 GETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 366
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 16 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 71
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 72 AKRLLDQIVEK 82
>gi|147905884|ref|NP_001082897.1| far upstream element-binding protein 2 [Danio rerio]
gi|141795754|gb|AAI39702.1| MGC163038 protein [Danio rerio]
Length = 666
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 107/192 (55%), Gaps = 17/192 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI D+ P R V I G
Sbjct: 105 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIAPDSGGLPD---RSVSITGGPE 161
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
I KA+ +++ +++ G PS +G+ E+ +P K GLIIG+GGET
Sbjct: 162 AIQKAKMMLDDIVSRG-RGTPPSF------HESTNGSGHMQEMVIPAGKAGLIIGKGGET 214
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLS 377
IK LQ R+G ++ LI Q +G + ++ +R+ GD +++ A+EM++E+L + P
Sbjct: 215 IKQLQERAGVKMILI-QDASQGP-NMDKPLRIIGDPYKVQQAREMVQEILRERDHP---- 268
Query: 378 GGFNQQAYRPRV 389
GF + Y R+
Sbjct: 269 -GFERNEYGSRM 279
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPS---STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQY 227
E+++ + ++ +V + PS ST+ S +++ +P K G++IGK G+TI+ LQ
Sbjct: 161 EAIQKAKMMLDDIVSRGRGTPPSFHESTNGSGHMQEMVIPAGKAGLIIGKGGETIKQLQE 220
Query: 228 NSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGG------SPSL 281
+G K+ + +DA P+ +P+ IIG + +A +++ ++ E D G +
Sbjct: 221 RAGVKMILIQDASQGPNM-DKPLRIIGDPYKVQQAREMVQEILRERDHPGFERNEYGSRM 279
Query: 282 VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
G G +E+ VP VG++IGR GE IK +Q +G RIQ P DG
Sbjct: 280 GGGGGGGGGGGGGGGGIEVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPD-----DG 334
Query: 342 SK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+ ++I + G + E A +I E+L Q++R
Sbjct: 335 TGPDKIAHIMGPPDRCEHAASIINELL-QSIR 365
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VGV+IG++G+ I+ +Q ++G +IQ D P + I+G + A
Sbjct: 297 EVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKPDDGTGPD---KIAHIMGPPDRCEHA 353
Query: 263 EKLINAVI----------------AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEK 306
+IN ++ RG ++ +P K
Sbjct: 354 ASIINELLQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGGNWGGPPGSEMTFSIPAHK 413
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
GL+IGRGGE +K + ++GA +++ Q P GD ++ + G +QI+ A+++I++
Sbjct: 414 CGLVIGRGGENVKAINQQTGAFVEISRQPPPNGD-PNFKLFTIRGSPQQIDHAKQLIEDK 472
Query: 367 L 367
+
Sbjct: 473 I 473
>gi|410979294|ref|XP_003996020.1| PREDICTED: far upstream element-binding protein 3 [Felis catus]
Length = 572
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------------ASGAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ A G +++ VP +
Sbjct: 312 HAAHVINELILTAQERDGFG-------GLAVARGRGRGRGDWSVGAPGGVQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D S R+ + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPSL-RVFTIRGVPQQIEVARHLIDE 423
Query: 366 VLSQT 370
+ T
Sbjct: 424 KVGGT 428
>gi|307187117|gb|EFN72361.1| Far upstream element-binding protein 1 [Camponotus floridanus]
Length = 690
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 109/183 (59%), Gaps = 14/183 (7%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI 252
SS+ + I VP+ VG++IG+ G+ I LQ +G KIQ+ ++ P R +
Sbjct: 92 SSSVGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPE---RVCTL 148
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ------VEIKVPNEK 306
G+ +++A++L+ +++ + S + +++A ASG VEI +P K
Sbjct: 149 TGSREAVNRAKELVLSIVNQRSR--SEGIGDINMSSASASGGNGGMIHPGFVEIMIPGPK 206
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VGLIIG+GGETIK LQ +SGA++ +I Q P + +E+ +R+TGD +++E A++++ E+
Sbjct: 207 VGLIIGKGGETIKQLQEKSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEYAKQLVYEL 263
Query: 367 LSQ 369
+++
Sbjct: 264 IAE 266
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 22/183 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 199 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQ--EKPLRITGDPQKVEYA 256
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGA-------------AEQVEIKVPNEKVGL 309
++L+ +IAE + + RG + +G ++ VE+ VP VG+
Sbjct: 257 KQLVYELIAEKEM----QMFHRGGRGTERTGNYSNDSSFNHGPANSDGVEVLVPRAAVGV 312
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IG+GG+ IK +Q SGA++Q Q E DG +R ++G + +E A++ I+E++
Sbjct: 313 VIGKGGDMIKKIQAESGAKVQF--QQGRE-DGPGDRKCLLSGKHQAVEQARQRIQELIDS 369
Query: 370 TVR 372
+R
Sbjct: 370 VMR 372
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I+VP++ VGLIIGRGGE I LQ+ +G +IQ+ PE G ER+ +TG +
Sbjct: 102 DIRVPDKMVGLIIGRGGEQITRLQSETGCKIQM----APESGGLPERVCTLTGSREAVNR 157
Query: 359 AQEMIKEVLSQTVR 372
A+E++ +++Q R
Sbjct: 158 AKELVLSIVNQRSR 171
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 46/230 (20%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
D+S + P+++D ++ VP VGV+IGK GD I+ +Q SGAK+Q + + P
Sbjct: 288 DSSFNHGPANSDGV----EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGP- 342
Query: 245 AATRPVEIIGTLSNIDKA----EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEI 300
R + G +++A ++LI++V+ D
Sbjct: 343 -GDRKCLLSGKHQAVEQARQRIQELIDSVMRRDDG------------------------- 376
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
N G RGGETIK + ++GA +L ++ E+I + G+ Q+E A+
Sbjct: 377 --RNNVGGRSGVRGGETIKQINQQTGAHCELDRRNQSN---ENEKIFIIRGNPEQVEHAK 431
Query: 361 EMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYD 410
+ E L S+ +G Y P TG W PSQP + D
Sbjct: 432 RIFSEKLGMGPASSSYAGAQGAVGYNPNWNTGYQAW------PSQPQSND 475
>gi|37078458|sp|Q91WJ8.1|FUBP1_MOUSE RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|15928578|gb|AAH14763.1| Fubp1 protein [Mus musculus]
gi|148679986|gb|EDL11933.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Mus
musculus]
Length = 651
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 95 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 151
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 152 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 204 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 251
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 151 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 205
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 206 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 262
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 263 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 314
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 315 PDRIAQITGPPDRCQHAAEIITDLL 339
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 276 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 332
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 333 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 392
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 393 ETIKSISQQSGARIELQRSPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 449
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 100 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 155
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 156 AKRLLDQIVEK 166
>gi|334349275|ref|XP_003342183.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1-like [Monodelphis domestica]
Length = 676
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 13/173 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 95 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 151
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 152 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++++Q++I ++ +
Sbjct: 204 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQVSQQLILRIIXEL 254
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 259 KVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHA 315
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRG 314
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 316 AEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWSMGPPGGLQEFNFIVPTGKTGLIIGKG 375
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 376 GETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 433
>gi|428173567|gb|EKX42468.1| hypothetical protein GUITHDRAFT_141154 [Guillardia theta CCMP2712]
Length = 459
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T + +EVPN+KVG++IGK G TI+ LQ +G K+QIT DA + RP+++ GT
Sbjct: 255 TQTVVVEVPNDKVGLVIGKGGCTIKELQQRTGCKMQITPDAAWAGKSDPRPIQLQGTEQQ 314
Query: 259 IDKAEKLI---------NAVIAEADAGGSPSLVARGLA-----------TAQ-ASGAAEQ 297
I E+LI N + + G P GLA TA GA +
Sbjct: 315 IYWVEQLIAEKINIPIENILQTQQVKPGLPPPADMGLAQYGMPPPYGAPTADPPVGAFQT 374
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
IKVPN+KVGL+IG+GG TIK +Q RSG ++Q+ P G ++ R V+V G +QI
Sbjct: 375 FIIKVPNDKVGLVIGKGGCTIKEIQQRSGVKMQITPDAAWAGR-AEPRPVQVQGTSQQIY 433
Query: 358 IAQEMIKE 365
A+ +I E
Sbjct: 434 WAKYLIAE 441
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 292 SGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+G + V ++VPN+KVGL+IG+GG TIK LQ R+G ++Q+ P G S R +++ G
Sbjct: 252 AGVTQTVVVEVPNDKVGLVIGKGGCTIKELQQRTGCKMQITPDAAWAGK-SDPRPIQLQG 310
Query: 352 DMRQIEIAQEMIKEVLS 368
+QI +++I E ++
Sbjct: 311 TEQQIYWVEQLIAEKIN 327
>gi|348586742|ref|XP_003479127.1| PREDICTED: far upstream element-binding protein 1-like [Cavia
porcellus]
Length = 643
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|427788843|gb|JAA59873.1| Putative kh-type splicing regulatory protein [Rhipicephalus
pulchellus]
Length = 753
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 17/164 (10%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP+ VG++IG+ G+ I LQ SG KIQ+ D + RP + G I+KA+++
Sbjct: 107 VPDKMVGLIIGRGGEQISRLQAESGCKIQMAPDCGG---MSERPCTLTGPRHAIEKAKEM 163
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
IN +I+ GG PS + G VE+ VP +VGL+IG+GGETI+GLQ R+
Sbjct: 164 INQIISR---GGDPSQLNDGHVV---------VELMVPGPRVGLVIGKGGETIRGLQERA 211
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
++ +I Q P+ ++ +R+TG+ + E A+ ++ +++++
Sbjct: 212 NVKMVMI-QDGPQ-QSMMDKPLRITGEKSKCEYAKRLVLDLITE 253
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 287 ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI 346
+ A A+ A E E VP++ VGLIIGRGGE I LQ SG +IQ+ P+ G ER
Sbjct: 94 SLANAAPAVE--EWSVPDKMVGLIIGRGGEQISRLQAESGCKIQM----APDCGGMSERP 147
Query: 347 VRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+TG IE A+EMI +++S+ PS L+ G
Sbjct: 148 CTLTGPRHAIEKAKEMINQIISRGGDPSQLNDG 180
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 45/207 (21%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+++ VP VGV+IGK GD I+ +Q +GA++Q + D + A R + G +
Sbjct: 299 SQEVLVPKQAVGVVIGKQGDMIKRIQQETGARVQFQQPQDDN--APDRVCLLTGGPDQVH 356
Query: 261 KAE----KLINAVIAEADAG-----GSPSLVAR--------------------------- 284
A +LI +V+ + G P AR
Sbjct: 357 HAASFIGELIQSVLNRSGFAPQRQFGFPPPFARDQQNMGRGRGRGRGGFDGGFGPPGGPG 416
Query: 285 ----GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD 340
G +V+ VP K GL+IG+GGE I+ + +SGA ++L P
Sbjct: 417 MGRGGRGRGPGGDDVHEVQYTVPANKCGLVIGKGGEAIRQINQQSGAHVELSRAPPPN-- 474
Query: 341 GSKERIVRVTGDMRQIEIAQEMIKEVL 367
E++ + G+ +QIE AQ++I E +
Sbjct: 475 -PVEKVFIIRGNPQQIEHAQQLINERI 500
>gi|332222252|ref|XP_003260281.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Nomascus leucogenys]
Length = 645
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 99/170 (58%), Gaps = 12/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + + S G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEKKEDPDS------GFHHGDGPGNAFQ-EIMIPASKAGLVIGKGGET 208
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 209 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 256
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSS-----TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYL 225
ESV+ + + Q+V+ K +DP S ++I +P +K G++IGK G+TI+ L
Sbjct: 155 ESVQSAKRLLDQIVE--KKEDPDSGFHHGDGPGNAFQEIMIPASKAGLVIGKGGETIKQL 212
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 213 QERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRNE- 268
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-E 344
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+ E
Sbjct: 269 --YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTTPE 321
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
RI ++TG + + A E+I ++L
Sbjct: 322 RIAQITGPPDRCQHAAEIITDLL 344
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 281 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 337
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 338 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 397
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 398 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 454
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQTVRPST 375
A+ ++ +++ + P +
Sbjct: 160 AKRLLDQIVEKKEDPDS 176
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------------ASGAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ A G +++ VP +
Sbjct: 312 HAAHVINELILTAQERDGFG-------GLAVARGRGRGRGDWSVGAPGGVQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGIPQQIEVARHLIDE 423
Query: 366 VLSQT 370
+ T
Sbjct: 424 KVGGT 428
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 77 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 133
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGET
Sbjct: 134 SIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQ--------ELLIPASKVGLVIGKGGET 185
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 186 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 235
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D S+ +++ +P +KVG++IGK G+TI+ LQ
Sbjct: 133 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQER 192
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG +
Sbjct: 193 TGVKMVMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RGDFS 249
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 250 SRMGGGS--LEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 302
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 303 QVMGPPDRCQHAAHVINELI 322
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 256 SLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 312
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ G +++ VP +
Sbjct: 313 HAAHVINELILTAQERDGFG-------GLAVARGRGRGRGDWSVGTPGGVQEITYTVPAD 365
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 366 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGIPQQIEVARHLIDE 424
Query: 366 VLSQT 370
+ T
Sbjct: 425 KVGGT 429
>gi|83320094|ref|NP_001032742.1| far upstream element-binding protein 1 [Rattus norvegicus]
gi|123780056|sp|Q32PX7.1|FUBP1_RAT RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|79160170|gb|AAI07943.1| Far upstream element (FUSE) binding protein 1 [Rattus norvegicus]
Length = 639
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 94 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 150
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 151 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 202
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 203 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 250
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 150 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 204
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 205 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 261
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 262 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 313
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 314 PDRIAQITGPPDRCQHAAEIITDLL 338
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 275 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 331
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 332 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 391
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 392 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 448
>gi|112180378|gb|AAH23780.1| Far upstream element (FUSE) binding protein 1 [Mus musculus]
gi|148679987|gb|EDL11934.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Mus
musculus]
Length = 640
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 95 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 151
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 152 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 204 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 251
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 151 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 205
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 206 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 262
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 263 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 314
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 315 PDRIAQITGPPDRCQHAAEIITDLL 339
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 276 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 332
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 333 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 392
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 393 ETIKSISQQSGARIELQRSPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 449
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 100 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 155
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 156 AKRLLDQIVEK 166
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 104/173 (60%), Gaps = 22/173 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP+N VG++IG+ G+ I LQ +G KIQ+ ++ P R + G+ +++A+
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPE---RLCTLTGSREAVNRAK 168
Query: 264 KLINAVIAE-------ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+L+ +++ + D GGS + SG VEI +P KVGLIIG+GGE
Sbjct: 169 ELVLSIVNQRSRTEGIGDMGGSSGGIM------SHSGF---VEIMIPGPKVGLIIGKGGE 219
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ +SGA++ +I Q P + +E+ +R+TGD +++E A++++ E++++
Sbjct: 220 TIKQLQEKSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEYAKQLVYELIAE 269
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 22/183 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 202 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQE--KPLRITGDPQKVEYA 259
Query: 263 EKLINAVIAEADAGGSPSLVARGL-------------ATAQASGAAEQVEIKVPNEKVGL 309
++L+ +IAE + + RG + SG + VE+ VP VG+
Sbjct: 260 KQLVYELIAEKEM----QMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVGV 315
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IG+GG+ IK +Q +GAR+Q Q E DG +R V+G + +E ++ I+E++
Sbjct: 316 VIGKGGDMIKKIQAETGARVQF--QQGRE-DGPGDRKCIVSGKHQAVEQVRQRIQELIDS 372
Query: 370 TVR 372
+R
Sbjct: 373 VMR 375
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 41/250 (16%)
Query: 189 SDDPSSTDDSTMSRKIEV--PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S+D S S + +EV P VGV+IGK GD I+ +Q +GA++Q + + P
Sbjct: 289 SNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGP--G 346
Query: 247 TRPVEIIGTLSNID----KAEKLINAVIAEADAGGSPSLVAR------------------ 284
R + G ++ + ++LI++V+ D G ++ AR
Sbjct: 347 DRKCIVSGKHQAVEQVRQRIQELIDSVMRRDD--GRSNIGARSGPRGNGFGNNRNPNEYG 404
Query: 285 GLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS 342
G Q +++E VP+ K G+IIG+GGETIK + ++GA +L ++
Sbjct: 405 GWDRRQGGPMQDKIETMFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSN---E 461
Query: 343 KERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPP--QWGPRG 400
E+I + G+ Q+E A+ + E L ++ +G Y P G W
Sbjct: 462 NEKIFIIRGNPEQVEHAKRIFSEKLGMAPANTSFTGTQGAIGYNPTWNAGTAYQAW---- 517
Query: 401 SHPSQPMAYD 410
P+QP D
Sbjct: 518 --PNQPQTTD 525
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I+VP+ VGLIIGRGGE I LQ+ +G +IQ+ PE G ER+ +TG +
Sbjct: 111 DIRVPDNMVGLIIGRGGEQITRLQSETGCKIQM----APESGGLPERLCTLTGSREAVNR 166
Query: 359 AQEMIKEVLSQTVR 372
A+E++ +++Q R
Sbjct: 167 AKELVLSIVNQRSR 180
>gi|345327623|ref|XP_001506617.2| PREDICTED: far upstream element-binding protein 1-like
[Ornithorhynchus anatinus]
Length = 827
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 239 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 295
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G + Q EI +P K GL+IG+GGET
Sbjct: 296 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNSVQ-EIMIPASKAGLVIGKGGET 347
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 348 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 395
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 28/207 (13%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P ++ ++I +P +K G++IGK G+TI+
Sbjct: 295 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNS-----VQEIMIPASKAGLVIGKGGETIK 349
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG
Sbjct: 350 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGG-----F 401
Query: 284 RGLATAQAS--GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
R + S G E +++ +P VG++IGR GE IK +Q +G RIQ P DG
Sbjct: 402 REVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DG 456
Query: 342 SK-ERIVRVTGDMRQIEIAQEMIKEVL 367
+ +RI ++TG + + A E+I ++L
Sbjct: 457 TTPDRIAQITGPPDRCQHAAEIITDLL 483
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 420 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 476
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 477 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 536
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 537 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 593
>gi|84662730|ref|NP_476513.2| far upstream element-binding protein 1 [Mus musculus]
gi|74144333|dbj|BAE36030.1| unnamed protein product [Mus musculus]
Length = 642
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 94 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 150
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 151 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 202
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 203 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 250
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 150 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 204
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 205 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 261
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 262 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 313
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 314 PDRIAQITGPPDRCQHAAEIITDLL 338
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 275 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 331
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 332 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 391
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 392 ETIKSISQQSGARIELQRSPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 448
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 147 EAFIDVKEETKEVTVKEEETVKEEES---VEPSNV---VPQQVVDNSKSDDPSST--DDS 198
E F+D +++ K + S V+PS V ++ +D+ + + +
Sbjct: 17 EGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGALVHQRA 76
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPES 133
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGETI
Sbjct: 134 IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGETI 185
Query: 319 KGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 186 KQLQERTGVKMVMIQDGPLPXG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIG 312
A IN +I E D G S+ + G +++ VP +K GL+IG
Sbjct: 312 HAAHFINELILTAQERDGFGGLSVARGRGRGRGDWSVGTPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGVPQQIEVARHLIDE 423
>gi|57529674|ref|NP_001006535.1| far upstream element-binding protein 1 [Gallus gallus]
gi|53136708|emb|CAG32683.1| hypothetical protein RCJMB04_32l4 [Gallus gallus]
Length = 627
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 96 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 152
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 153 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 204
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 205 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 252
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
R++ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G
Sbjct: 259 REVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQH 315
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQAS---------GAAEQVEIKVPNEKVGLIIG 312
A ++I ++ AG G G ++ VP K GLIIG
Sbjct: 316 AAEIITDLLRSVQAGNPGGPGGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 375
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V
Sbjct: 376 KGGETIKSISQQSGARIELQRNPPPNAD-PNMKMFTIRGTPQQIDYARQLIEEKIGGPVN 434
Query: 373 P 373
P
Sbjct: 435 P 435
>gi|449508372|ref|XP_002188229.2| PREDICTED: far upstream element-binding protein 1 [Taeniopygia
guttata]
Length = 592
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 46 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 102
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 103 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 154
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 155 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 202
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 102 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 156
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 157 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 213
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 214 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 265
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 266 PDRIAQITGPPDRCQHAAEIITDLL 290
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 227 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 283
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 284 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 343
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 344 ETIKSISQQSGARIELQRNPPPNAD-PNMKMFTIRGTPQQIDYARQLIEEKIGGPVNP 400
>gi|443720285|gb|ELU10083.1| hypothetical protein CAPTEDRAFT_219465 [Capitella teleta]
Length = 708
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 7/171 (4%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D TM ++ +P NKVG++IGK G+TI++LQ +G K+ + +D++ P +P+ I G++
Sbjct: 224 DQTM-LEVFIPGNKVGLVIGKGGETIKHLQEQAGVKMVMIQDSNL-PSNQDKPLRITGSI 281
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
KA++L+ +IAE D GG +EI VP VG++IGRGGE
Sbjct: 282 QACQKAKELVMDLIAEKDMGGGGGGGGGYGGDYGGG-GRNAMEIPVPRSMVGVVIGRGGE 340
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK +Q +GA++Q +G G R+ + G +++ A MI+E++
Sbjct: 341 MIKKIQAETGAKVQF---KTDDGQGPN-RMCTINGPQDKVQNASCMIRELI 387
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 95/165 (57%), Gaps = 18/165 (10%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP+ VG++IGK G+ I +Q +G K+Q D+ P RP +++GT I +A+K
Sbjct: 150 VPDRMVGLIIGKGGEQIANIQSETGCKVQFAPDSAGMPD---RPCQLMGTPQAIAEAKKT 206
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I +I + G P G +E+ +P KVGL+IG+GGETIK LQ ++
Sbjct: 207 IERIIQKGQ--GLPD---------NFGGDQTMLEVFIPGNKVGLVIGKGGETIKHLQEQA 255
Query: 326 GARIQLI-PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
G ++ +I +LP ++++ +R+TG ++ + A+E++ +++++
Sbjct: 256 GVKMVMIQDSNLPS---NQDKPLRITGSIQACQKAKELVMDLIAE 297
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 30/193 (15%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
+ +I VP + VGV+IG+ G+ I+ +Q +GAK+Q D D R I G +
Sbjct: 321 AMEIPVPRSMVGVVIGRGGEMIKKIQAETGAKVQFKTD---DGQGPNRMCTINGPQDKVQ 377
Query: 261 KAEKLINAVIAEADA------------------GGSPSLVARGLATAQASGAA------- 295
A +I +I A GGS G+
Sbjct: 378 NASCMIRELIDTAMNDRGRGRGGGGRGGGMDFNGGSGGNGRDYGNGGGGGGSYGGGGSGQ 437
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++ VP EK GL+IG+GGETI+ + +SGA ++L +H + + S++R+ ++ G+ Q
Sbjct: 438 DETMFAVPAEKCGLVIGKGGETIREINRQSGAHVEL-DRHQSQSN-SRDRVFKIQGNADQ 495
Query: 356 IEIAQEMIKEVLS 368
I+ A +I + S
Sbjct: 496 IQSAIRLISDKAS 508
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 29/201 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------------ASGAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ A G +++ VP +
Sbjct: 312 HAAHVINELILTAQERDGFG-------GLAVARGRGRGRGDWSVGAPGGVQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGIPQQIEVARHLIDE 423
Query: 366 VLSQTVRPSTLS-GGFNQQAY 385
+ VR S + G F Q +
Sbjct: 424 KVG--VRTSLGAPGAFGQSPF 442
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------ELLIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ +++ +P +KVG++IGK G+TI+ LQ
Sbjct: 132 ESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQER 191
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG
Sbjct: 192 TGVKMVMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RGDFA 248
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++A G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 249 SRAGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 301
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 302 QVMGPPDRCQHAAHIINELI 321
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ G +++ VP +
Sbjct: 312 HAAHIINELILTAQERDGLG-------GLAVARGRGRGRGDWSVGTPGGVQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQIEVARHLIDE 423
>gi|149039051|gb|EDL93271.1| rCG45587 [Rattus norvegicus]
Length = 569
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------ELLIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A ++IN +I A G RG + G +++ VP +K GL+IG
Sbjct: 312 HAARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQIEVARHLIDE 423
>gi|86129564|ref|NP_001034426.1| far upstream element-binding protein 3 [Rattus norvegicus]
gi|75270299|gb|ABA18725.1| MAP2 RNA trans-acting protein 2 [Rattus norvegicus]
Length = 569
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q E+ +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------ELLIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q +G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNGTGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A ++IN +I A G RG + G +++ VP +K GL+IG
Sbjct: 312 HAARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQIEVARHLIDE 423
>gi|296489207|tpg|DAA31320.1| TPA: far upstream element-binding protein [Bos taurus]
Length = 610
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|417411544|gb|JAA52203.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 544
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 48 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 104
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I+ A++L+ ++ G G +T Q E+ +P KVGL+IG+GGET
Sbjct: 105 SIELAKRLLGQIVDRCRNGPGFHNDVDGSSTVQ--------EVLIPASKVGLVIGKGGET 156
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 157 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRMTGDPFKVQQAREMVLEIIRE 206
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D S+ +++ +P +KVG++IGK G+TI+ LQ
Sbjct: 104 ESIELAKRLLGQIVDRCRNGPGFHNDVDGSSTVQEVLIPASKVGLVIGKGGETIKQLQER 163
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ + G + +A +++ +I E D ARG
Sbjct: 164 TGVKMVMIQDGPL-PTGADKPLRMTGDPFKVQQAREMVLEIIREKDQADFRG--ARGDFA 220
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
+ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 221 PRTGGGS--LEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 273
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 274 QVMGPPDRCQHAAHVINELI 293
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 26/180 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 227 SLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 283
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ G +++ VP +
Sbjct: 284 HAAHVINELILTAQERDGFG-------GLAVARGRGRGRGDWSLGTPGGIQEITYTVPAD 336
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D S RI + G +QIE+A+ +I E
Sbjct: 337 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSL-RIFTIRGIPQQIEVARHLIDE 395
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIG 312
A +IN +I E D G ++ + A G +++ VP +K GL+IG
Sbjct: 312 HAAHVINELILTAQERDGFGGLTVARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GG+ IK + +SGA ++L P D RI + G +QIE+A+ +I E + T
Sbjct: 372 KGGDNIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGIPQQIEVARHLIDEKVGGT 428
>gi|147906092|ref|NP_001080641.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|28278093|gb|AAH44277.1| Fubp1 protein [Xenopus laevis]
Length = 653
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ + +VP+ VG +IG+ G+ I +Q +SG KIQI D+ P R + G+
Sbjct: 87 SVLTEEYKVPDGMVGFIIGRGGEQISRIQQDSGCKIQIAPDSAGMPD---RSCMLTGSPD 143
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P+ G + SG A Q EI +P K GL+IG+GGET
Sbjct: 144 SVQAAKRLLDQIVEK----GRPT---PGFHHGEGSGNAVQ-EIMIPASKAGLVIGKGGET 195
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+ GD +++ A+EM+ E++
Sbjct: 196 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRIAGDPYKVQQAKEMVLELI 243
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 176 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQN-TGADKPLRIAGDPYKVQQ 234
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + GA E +++ +P VG++IGR GE IK +
Sbjct: 235 AKEMVLELIR--DQGGFREIRNE---YGSRIGANEGIDVPIPRFAVGIVIGRSGEMIKKI 289
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DGS ERI ++TG + A E+I ++L
Sbjct: 290 QNDAGVRIQFKPD-----DGSVPERIAQITGPQDGCQHAAEIINDLL 331
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG++G+ I+ +Q ++G +IQ D + P R +I G A
Sbjct: 268 VPIPRFAVGIVIGRSGEMIKKIQNDAGVRIQFKPDDGSVPE---RIAQITGPQDGCQHAA 324
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++IN ++ +G + G + G ++ VP K GLIIG+GG
Sbjct: 325 EIINDLLRSVQSGNAGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFVVPTVKTGLIIGKGG 384
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK + SGARI+L P D ++ + G +QI+ A+++++E +
Sbjct: 385 ETIKNISQTSGARIELQRNPPPNAD-PNVKLFTIRGSPQQIDYARQLVEEKI 435
>gi|74206095|dbj|BAE23532.1| unnamed protein product [Mus musculus]
Length = 700
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 95 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 151
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 152 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 204 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 251
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 151 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 205
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 206 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 262
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 263 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 314
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 315 PDRIAQITGPPDRCQHAAEIITDLL 339
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 276 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 332
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 333 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 392
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 393 ETIKSISQQSGARIELQRSPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 449
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 100 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 155
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 156 AKRLLDQIVEK 166
>gi|427792821|gb|JAA61862.1| Putative kh-type splicing regulatory protein, partial
[Rhipicephalus pulchellus]
Length = 680
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 17/164 (10%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP+ VG++IG+ G+ I LQ SG KIQ+ D + RP + G I+KA+++
Sbjct: 42 VPDKMVGLIIGRGGEQISRLQAESGCKIQMAPDCGG---MSERPCTLTGPRHAIEKAKEM 98
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
IN +I+ GG PS + G VE+ VP +VGL+IG+GGETI+GLQ R+
Sbjct: 99 INQIISR---GGDPSQLNDGHVV---------VELMVPGPRVGLVIGKGGETIRGLQERA 146
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
++ +I Q P+ ++ +R+TG+ + E A+ ++ +++++
Sbjct: 147 NVKMVMI-QDGPQ-QSMMDKPLRITGEKSKCEYAKRLVLDLITE 188
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 287 ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI 346
+ A A+ A E E VP++ VGLIIGRGGE I LQ SG +IQ+ P+ G ER
Sbjct: 29 SLANAAPAVE--EWSVPDKMVGLIIGRGGEQISRLQAESGCKIQM----APDCGGMSERP 82
Query: 347 VRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
+TG IE A+EMI +++S+ PS L+ G
Sbjct: 83 CTLTGPRHAIEKAKEMINQIISRGGDPSQLNDG 115
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 45/207 (21%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+++ VP VGV+IGK GD I+ +Q +GA++Q + D + A R + G +
Sbjct: 234 SQEVLVPKQAVGVVIGKQGDMIKRIQQETGARVQFQQPQDDN--APDRVCLLTGGPDQVH 291
Query: 261 KAE----KLINAVIAEADAG-----GSPSLVAR--------------------------- 284
A +LI +V+ + G P AR
Sbjct: 292 HAASFIGELIQSVLNRSGFAPQRQFGFPPPFARDQQNMGRGRGRGRGGFDGGFGPPGGPG 351
Query: 285 ----GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD 340
G +V+ VP K GL+IG+GGE I+ + +SGA ++L P
Sbjct: 352 MGRGGRGRGPGGDDVHEVQYTVPANKCGLVIGKGGEAIRQINQQSGAHVELSRAPPPN-- 409
Query: 341 GSKERIVRVTGDMRQIEIAQEMIKEVL 367
E++ + G+ +QIE AQ++I E +
Sbjct: 410 -PVEKVFIIRGNPQQIEHAQQLINERI 435
>gi|348536733|ref|XP_003455850.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 678
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 98/176 (55%), Gaps = 26/176 (14%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
STM+ + VP++ VG++IG+ G+ I +Q SG K+QI D+ P R + + G+
Sbjct: 99 STMTEECRVPDSMVGLIIGRGGEQINKIQQESGCKVQIAHDSVGLPE---RSISLTGSPD 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
I +A L++ +V+RG + ++ Q E+ +P K GLIIG+GGET
Sbjct: 156 AIQRARALLD------------DIVSRGHESTNGQSSSMQ-EMIIPAGKAGLIIGKGGET 202
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI D S+ ++ +R+ GD +++ A+EM+ E+L +
Sbjct: 203 IKQLQERAGVKMILIQ------DASQPPNIDKPLRIIGDPYKVQQAKEMVNEILQE 252
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 14/187 (7%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S+ + ++ S+M I +P K G++IGK G+TI+ LQ +G K+ + +DA P+
Sbjct: 169 SRGHESTNGQSSSMQEMI-IPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQPPNI- 226
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEK 306
+P+ IIG + +A++++N ++ E D G R ++ G +E+ VP
Sbjct: 227 DKPLRIIGDPYKVQQAKEMVNEILQERDHQG---FGERNEYGSRMGGGG--IEVTVPRHS 281
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKE 365
VG++IGR GE IK +Q+ +G +IQ P DG+ ++I + G Q + A +I +
Sbjct: 282 VGVVIGRSGEMIKKIQSDAGVKIQFKPD-----DGTGPDKIAHIMGPPDQCQHAASIITD 336
Query: 366 VLSQTVR 372
+L Q++R
Sbjct: 337 LL-QSIR 342
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VGV+IG++G+ I+ +Q ++G KIQ D P + I+G A
Sbjct: 274 EVTVPRHSVGVVIGRSGEMIKKIQSDAGVKIQFKPDDGTGPD---KIAHIMGPPDQCQHA 330
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE--------------QVEIKVPNEKVG 308
+I ++ A A ++ +P K G
Sbjct: 331 ASIITDLLQSIRAREEGGQGGPPGPGAGMPPGGRGQGRGQGNWGPPGGEMTFSIPAHKCG 390
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
L+IGRGGE +K + ++GA +++ Q P GD ++ + G +QI+ A+++I+E +
Sbjct: 391 LVIGRGGENVKSINQQTGAFVEISRQPPPNGD-PNFKLFTIRGSPQQIDHAKQLIEEKI 448
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT
Sbjct: 94 AVITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPE---RPCVLTGTPE 150
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 151 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGET 202
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I +P G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 203 IKQLQERTGVKMIMIQDGPMPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 252
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 150 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 209
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 210 TGVKMIMIQDGPM-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RNDFS 266
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 267 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERVA 319
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 320 QVMGLPDRCQHAAHIISELI 339
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 273 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RVAQVMGLPDRCQ 329
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I E D GS ++ + G +++ VP +K GL+IG
Sbjct: 330 HAAHIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLVIG 389
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E + T
Sbjct: 390 KGGENIKSINQQSGAHVELQRNPPPNTD-PGVRIFTIRGVPQQIELARHLIDEKVGGTSM 448
Query: 373 PSTLSGG---FNQQAYRPRVPTGPPQWGP 398
G FNQ PT P Q GP
Sbjct: 449 GGPGGFGQSPFNQ------APTTPHQNGP 471
>gi|449275835|gb|EMC84592.1| Far upstream element-binding protein 1, partial [Columba livia]
Length = 611
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 60 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P+ G G A Q EI +P K GL+IG+GGET
Sbjct: 117 SVQSAKRLLDQIVEK----GRPT---PGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 168
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 169 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 216
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 116 ESVQSAKRLLDQIVEKGRPTPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 170
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 171 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 227
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 228 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 279
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 280 PDRIAQITGPPDRCQHAAEIITDLL 304
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 241 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 297
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRG- 314
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 298 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGN 357
Query: 315 -----GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
GETIK + +SGARI+L P D ++ + G +QI+ A+++I+E +
Sbjct: 358 ISYIRGETIKSISQQSGARIELQRNPPPNAD-PNMKMFTIRGTPQQIDYARQLIEEKIGG 416
Query: 370 TVRP 373
V P
Sbjct: 417 PVNP 420
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 127 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPE---RPCVLTGTPE 183
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G T Q EI +P KVGL+IG+GGET
Sbjct: 184 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQ--------EILIPASKVGLVIGKGGET 235
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 236 IKQLQERTGVKMIMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 285
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D + ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 183 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEILIPASKVGLVIGKGGETIKQLQER 242
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 243 TGVKMIMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RSDFS 299
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 300 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERVA 352
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I +++
Sbjct: 353 QVMGLPERCQHAAHVISDLI 372
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 306 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RVAQVMGLPERCQ 362
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------ASGAAEQVEIKVPNEKVGLII 311
A +I+ +I E D GS S V RG + A G ++V VP +K GL+I
Sbjct: 363 HAAHVISDLILTAQERDGFGSLS-VPRGRGRGRSDWSVGAPGGLQEVTYTVPADKCGLVI 421
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GGE IK + +SGA ++L P D S RI + G +QIE+A+ +I E + T
Sbjct: 422 GKGGENIKSINQQSGAHVELQRNPPPNTDPSV-RIFTIRGIPQQIELARHLIDEKVGGTN 480
Query: 372 RPSTLSGG---FNQQAYRPRVPTGPPQ 395
+ S G FNQ P T PP+
Sbjct: 481 MGAPGSFGQSPFNQAPATPHQNTFPPR 507
>gi|158297666|ref|XP_317858.4| AGAP011446-PA [Anopheles gambiae str. PEST]
gi|157014686|gb|EAA13030.4| AGAP011446-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 94/169 (55%), Gaps = 15/169 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P +KVG++IGK G+TI+ LQ +GAK+ I +D +P+ I G + +++A+
Sbjct: 180 MMIPGSKVGLIIGKGGETIKQLQEKTGAKMVIIQDGPG--QEMEKPLRISGDPAKVEQAK 237
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ +I E DA + Q EQ E+ VP VG++IG+GGE IK +Q
Sbjct: 238 QLVYELIQEKDA----------YSQRQNMNGGEQAEVFVPKAAVGVVIGKGGEMIKKIQG 287
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
SG ++Q I GDG+ +R V G Q+E + M+++++ +R
Sbjct: 288 ESGCKLQFIQ---GRGDGAGDRRCIVQGSKAQVEEGKRMVEDLIDSVLR 333
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIE 357
E+ +P KVGLIIG+GGETIK LQ ++GA++ +I +G G + E+ +R++GD ++E
Sbjct: 179 EMMIPGSKVGLIIGKGGETIKQLQEKTGAKMVII----QDGPGQEMEKPLRISGDPAKVE 234
Query: 358 IAQEMIKEVLSQT---VRPSTLSGGFNQQAYRPRVPTG 392
A++++ E++ + + ++GG + + P+ G
Sbjct: 235 QAKQLVYELIQEKDAYSQRQNMNGGEQAEVFVPKAAVG 272
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP +K G++IG+ GDTI+ + SGA ++ R A + + G +D+A++L
Sbjct: 390 VPVSKCGIIIGRGGDTIKQINQQSGAHTEMDRKASLN-QTTEKTFTCKGEQHQVDEAKRL 448
Query: 266 I 266
I
Sbjct: 449 I 449
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP K G+IIGRGG+TIK + +SGA ++ + + E+ G+ Q++ A+
Sbjct: 390 VPVSKCGIIIGRGGDTIKQINQQSGAHTEM--DRKASLNQTTEKTFTCKGEQHQVDEAKR 447
Query: 362 MIKEVLSQTV 371
+I++ ++ +
Sbjct: 448 LIQDKINMEI 457
>gi|327276689|ref|XP_003223100.1| PREDICTED: far upstream element-binding protein 1-like [Anolis
carolinensis]
Length = 660
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 97 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPE---RSCMLTGTPE 153
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P+ G G A Q EI +P K GL+IG+GGET
Sbjct: 154 SVQSAKRLLDQIVEK----GRPT---PGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 205
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ +++
Sbjct: 206 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLDLI 253
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 153 ESVQSAKRLLDQIVEKGRPTPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 207
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 208 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLDLIR--DQGGFREVRN 264
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 265 E---YGSRIGGNEGLDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 316
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 317 PDRIAQITGPPDRCQHAAEIITDLL 341
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 278 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 334
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 335 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 394
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 395 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 451
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 78 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPE---RPCVLTGTPE 134
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G T Q EI +P KVGL+IG+GGET
Sbjct: 135 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQ--------EILIPASKVGLVIGKGGET 186
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 187 IKQLQERTGVKMIMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 236
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D + ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 134 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEILIPASKVGLVIGKGGETIKQLQER 193
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 194 TGVKMIMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RSDFS 250
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 251 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERVA 303
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I +++
Sbjct: 304 QVMGLPERCQHAAHVISDLI 323
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 257 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RVAQVMGLPERCQ 313
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------ASGAAEQVEIKVPNEKVGLII 311
A +I+ +I E D GS S V RG + A G ++V VP +K GL+I
Sbjct: 314 HAAHVISDLILTAQERDGFGSLS-VPRGRGRGRSDWSIGAPGGLQEVTYTVPADKCGLVI 372
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GGE IK + +SGA ++L P D S RI + G +QIE+A+ +I E + T
Sbjct: 373 GKGGENIKSINQQSGAHVELQRNPPPNTDPSV-RIFTIRGVPQQIELARHLIDEKVGGTN 431
Query: 372 RPSTLSGGFNQQAY 385
+ GGF Q +
Sbjct: 432 MGA--PGGFGQSPF 443
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT
Sbjct: 95 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPE---RPCVLTGTPE 151
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 152 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TG+ +++ A+EM+ E++ +
Sbjct: 204 IKQLQERTGVKMIMIQDGPLPTG---ADKPLRITGEPFKVQQAREMVLEIIRE 253
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 151 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 210
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 211 TGVKMIMIQDGPL-PTGADKPLRITGEPFKVQQAREMVLEIIREKDQADFRGV--RSDFS 267
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 268 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERVA 320
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 321 QVMGLPDRCQHAAHIINELI 340
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 14/181 (7%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 274 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RVAQVMGLPDRCQ 330
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIG 312
A +IN +I E D GS ++ + G +++ VP +K GL+IG
Sbjct: 331 HAAHIINELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLVIG 390
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D S RI + G +QIE+A+ +I E + VR
Sbjct: 391 KGGENIKSINQQSGAHVELQRNPPPNTDPSV-RIFTIRGVPQQIELARHLIDEKVG--VR 447
Query: 373 P 373
P
Sbjct: 448 P 448
>gi|355689343|gb|AER98802.1| far upstream element binding protein 1 [Mustela putorius furo]
Length = 593
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 209 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 265
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 266 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 317
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 318 PDRIAQITGPPDRCQHAAEIITDLL 342
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 279 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 336 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 396 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|312385967|gb|EFR30351.1| hypothetical protein AND_00126 [Anopheles darlingi]
Length = 1325
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 15/169 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P +KVG++IGK G+TI+ LQ +GAK+ I +D +P+ I G ++ A+
Sbjct: 779 MMIPGSKVGLIIGKGGETIKQLQEKTGAKMVIIQDGPG--QEMEKPLRISGDPQKVEHAK 836
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ +I E D+ + Q +EQ E+ VP VG++IG+GGE IK +Q
Sbjct: 837 QLVYELIQEKDS----------YSQRQNMNGSEQAEVFVPKAAVGVVIGKGGEMIKKIQG 886
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
SG ++Q I GDG +R V G Q+E + MI+E++ +R
Sbjct: 887 ESGCKLQFIQ---GRGDGPGDRRCIVLGTKAQVEDGKRMIEELIDSVLR 932
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 52/70 (74%), Gaps = 5/70 (7%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIE 357
E+ +P KVGLIIG+GGETIK LQ ++GA++ +I +G G + E+ +R++GD +++E
Sbjct: 778 EMMIPGSKVGLIIGKGGETIKQLQEKTGAKMVII----QDGPGQEMEKPLRISGDPQKVE 833
Query: 358 IAQEMIKEVL 367
A++++ E++
Sbjct: 834 HAKQLVYELI 843
>gi|387015918|gb|AFJ50078.1| Far upstream element-binding protein 1-like [Crotalus adamanteus]
Length = 682
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 13/169 (7%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT +
Sbjct: 119 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPES 175
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ A++L++ ++ + G P+ G G A Q EI +P K GL+IG+GGETI
Sbjct: 176 VQSAKRLLDQIVEK----GRPT---PGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETI 227
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
K LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ +++
Sbjct: 228 KQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLDLI 274
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDS--TMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ESV+ + + Q+V+ + D ++I +P +K G++IGK G+TI+ LQ
Sbjct: 174 ESVQSAKRLLDQIVEKGRPTPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQER 233
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 234 AGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLDLIR--DQGGFREVRNE---Y 287
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIV 347
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+ +RI
Sbjct: 288 GSRIGGNEGLDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTTPDRIA 342
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
++TG + + A E+I ++L
Sbjct: 343 QITGPPDRCQHAAEIITDLL 362
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 299 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 355
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 356 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 415
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 416 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 472
>gi|147902659|ref|NP_001083916.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|213625145|gb|AAI69923.1| RNA-binding protein VgRBP71 [Xenopus laevis]
Length = 672
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 23/195 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+M+ + VP+ VG++IG+ G+ I +Q SG K+QI+ D+ P R V + G
Sbjct: 92 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPE---RIVSLTGNPD 148
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ KA+ L++ ++ GG PS ++ +G+ + EI +P K GLIIG+GGET
Sbjct: 149 AVQKAKMLLDDIVLRG-RGGPPSQFHD--SSNGQNGSLQ--EIMIPAGKAGLIIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ G+ +++ A EM+ ++L + +P
Sbjct: 204 IKQLQERAGVKMILI------QDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLKERDQP 257
Query: 374 STLSGGFNQQAYRPR 388
+ F++ Y R
Sbjct: 258 N-----FDRNEYGTR 267
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSR-----KIEVPNNKVGVLIGKAGDTIRYL 225
++V+ + ++ +V + PS DS+ + +I +P K G++IGK G+TI+ L
Sbjct: 148 DAVQKAKMLLDDIVLRGRGGPPSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQL 207
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G K+ + +D + + +P+ I+G + +A +++ ++ E D P+
Sbjct: 208 QERAGVKMILIQDGSQNTNM-DKPLRIVGEPFKVQQACEMVMDLLKERD---QPNFDRNE 263
Query: 286 LAT---AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS 342
T G +++ VP VG++IGR G+ IK +Q +G RIQ + DG+
Sbjct: 264 YGTRGGGGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQ-----FKQDDGT 318
Query: 343 K-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
++I + G + E A +I ++L Q++R
Sbjct: 319 GPDKIAHIMGPPDRCEHAASIISDLL-QSLR 348
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++GD I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 281 VPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGPD---KIAHIMGPPDRCEHAA 337
Query: 264 KLINAVI--------AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+I+ ++ G P RG ++ +P K GL+IGRGG
Sbjct: 338 SIISDLLQSLRTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGG 397
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E +K + ++GA +++ Q P GD + + + + G+ +QI+ A+++I+E +
Sbjct: 398 ENVKAINQQTGAFVEISRQPPPNGDPNFKMFI-IRGNPQQIDHAKQLIEEKI 448
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D S+ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 133 ESIEQAKRLLGQIVDRCRNGPGFHNDMDGSSTVQEILIPASKVGLVIGKGGETIKQLQER 192
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A L+ +I E D + R +
Sbjct: 193 TGVKMIMIQDGPL-PTGADKPLRITGDPFKVQQARDLVLEIIREKDQADFRGI--RSDFS 249
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + VE+ VP VG+IIGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 250 SRIGGGS--VEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPD-----DGLSPERVA 302
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 303 QVMGLPDRCQHAAHIINELI 322
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ M+ + VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT
Sbjct: 77 AVMTEEYNVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPE---RPCVLTGTPE 133
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 134 SIEQAKRLLGQIVDRCRNGPGFHNDMDGSSTVQ--------EILIPASKVGLVIGKGGET 185
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A++++ E++ +
Sbjct: 186 IKQLQERTGVKMIMIQDGPLPTG---ADKPLRITGDPFKVQQARDLVLEIIRE 235
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 256 SVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDDGLSPE---RVAQVMGLPDRCQ 312
Query: 261 KAEKLINAVIA---EADAGGSPSLV-----ARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +IN +I E D G SL +RG G+ +++ VP +K GL+IG
Sbjct: 313 HAAHIINELILTAQERDGFGGLSLARGRGRSRGDWNLSTPGSMQEINYTVPADKCGLVIG 372
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GGE IK + +SGA ++L P D + RI + G +QIE+A+ +I E + T
Sbjct: 373 KGGENIKNINQQSGAHVELQRNPPPNTDPAV-RIFTIRGVPQQIELARHLIDEKVGGT-- 429
Query: 373 PSTLSG--GFNQQAY 385
T+ G F Q A+
Sbjct: 430 --TIGGPSSFGQSAF 442
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S+ D ST S VP +K G++IGK G+ I+ + SGA +++ R+ + A
Sbjct: 343 SRGDWNLSTPGSMQEINYTVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPA 402
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQAS 292
R I G I+ A LI+ + GG S + A A+
Sbjct: 403 VRIFTIRGVPQQIELARHLIDEKVGGTTIGGPSSFGQSAFSQAHAT 448
>gi|89272465|emb|CAJ82621.1| fubp1 [Xenopus (Silurana) tropicalis]
Length = 653
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 101/170 (59%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + G+
Sbjct: 87 SVVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPD---RSCMLTGSPD 143
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P+ G + SG A Q EI +P K GL+IG+GGET
Sbjct: 144 SVQAAKRLLDQIVEK----GRPT---PGFHHGEGSGNAVQ-EIMIPASKAGLVIGKGGET 195
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+ GD +++ A+EM+ E++
Sbjct: 196 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRIAGDPYKVQQAKEMVLELI 243
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 176 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQN-TGADKPLRIAGDPYKVQQ 234
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + G E +++ +P VG++IGR GE IK +
Sbjct: 235 AKEMVLELIR--DQGGFREIRNE---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI 289
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DGS ERI ++TG + + A E+I ++L
Sbjct: 290 QNDAGVRIQFKPD-----DGSTPERIAQITGPQHRCQHAAEIINDLL 331
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D + P R +I G A
Sbjct: 268 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTPE---RIAQITGPQHRCQHAA 324
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++IN ++ +G + G + G ++ VP K GLIIG+GG
Sbjct: 325 EIINDLLRSVQSGNAGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFVVPTVKTGLIIGKGG 384
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK + +SGARI+L P D ++ + G +QI+ A+++++E +
Sbjct: 385 ETIKNISQQSGARIELQRNPPPNAD-PNVKLFTIRGSPQQIDYARQLVEEKI 435
>gi|403358770|gb|EJY79040.1| Far upstream element-binding protein [Oxytricha trifallax]
Length = 495
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 19/194 (9%)
Query: 192 PSSTDDSTMS---------RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADAD 242
P TDDS M+ I +PN+ VG++IGK G+TIR LQ SGAKIQ+ +
Sbjct: 230 PFITDDSMMTPYGPPSPAAFIIPIPNDCVGLIIGKGGETIRNLQLQSGAKIQVAKKECQG 289
Query: 243 PHAATRPVEIIGTLSNIDKAEKLINAVIAEA-DAGGSPSLVARGLATAQASGA----AEQ 297
R V + G D A+KLI+ ++ EA + SL G A +
Sbjct: 290 NQ--IRNVFVEGPQERYDLAKKLIDEIVNEARKLNKTSSLTTSGNNIAFTAEVNPFPGPH 347
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
+ +PN GLIIG+ G+TIK L + GA I + QH + ERI+ ++G QIE
Sbjct: 348 IPFSIPNSLTGLIIGKNGDTIKQLHNKCGAYIFIPKQH---DHQTNERILELSGSEEQIE 404
Query: 358 IAQEMIKEVLSQTV 371
A++ I+ +L V
Sbjct: 405 RAKKEIQRLLGNAV 418
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 195 TDDSTMSRKIEVPN----NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D S +K+ +P N VG+LIG G + L+ ++G D++
Sbjct: 145 NDPSKFKKKVYIPQSQHINYVGLLIGPKGTYQKKLEDDTGF-------GDSEKQVNDAET 197
Query: 251 EIIGTL------SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPN 304
I+ L N +AE+L V + P + + T + I +PN
Sbjct: 198 TILNVLYANDEERNKIRAEQL--KVAEDLQIQSFPFITDDSMMTPYGPPSPAAFIIPIPN 255
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ VGLIIG+GGETI+ LQ +SGA+IQ+ + E G++ R V V G + ++A+++I
Sbjct: 256 DCVGLIIGKGGETIRNLQLQSGAKIQVAKK---ECQGNQIRNVFVEGPQERYDLAKKLID 312
Query: 365 EVLSQ---TVRPSTLSGGFNQQAYRPRV 389
E++++ + S+L+ N A+ V
Sbjct: 313 EIVNEARKLNKTSSLTTSGNNIAFTAEV 340
>gi|45361433|ref|NP_989293.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|39794540|gb|AAH63902.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 653
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 101/170 (59%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + G+
Sbjct: 87 SVVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPD---RSCMLTGSPD 143
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P+ G + SG A Q EI +P K GL+IG+GGET
Sbjct: 144 SVQAAKRLLDQIVEK----GRPT---PGFHHGEGSGNAVQ-EIMIPASKAGLVIGKGGET 195
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+ GD +++ A+EM+ E++
Sbjct: 196 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRIAGDPYKVQQAKEMVLELI 243
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 176 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQN-TGADKPLRIAGDPYKVQQ 234
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + G E +++ +P VG++IGR GE IK +
Sbjct: 235 AKEMVLELIR--DQGGFREIRNE---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI 289
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DGS ERI ++TG + + A E+I ++L
Sbjct: 290 QNDAGVRIQFKPD-----DGSTPERIAQITGPQDRCQHAAEIINDLL 331
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D + P R +I G A
Sbjct: 268 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTPE---RIAQITGPQDRCQHAA 324
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++IN ++ +G + G + G ++ VP K GLIIG+GG
Sbjct: 325 EIINDLLRSVQSGNAGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFVVPTVKTGLIIGKGG 384
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK + +SGARI+L P D ++ + G +QI+ A+++++E +
Sbjct: 385 ETIKNISQQSGARIELQRNPPPNAD-PNVKLFTIRGSPQQIDYARQLVEEKI 435
>gi|339236169|ref|XP_003379639.1| putative KH domain protein [Trichinella spiralis]
gi|316977680|gb|EFV60751.1| putative KH domain protein [Trichinella spiralis]
Length = 614
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 104/176 (59%), Gaps = 16/176 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D T++ ++ +P K G++IGK G+TI+ LQ +G K+ + ++++ P +P+ IIG
Sbjct: 199 DKTITTEMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESN-QPSGLPKPLRIIGEP 257
Query: 257 SNIDKAEKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQV-EIKVPNEKVGLIIGRG 314
+ ++ A++LI ++ ++ D SL + A++++ E+ VP VG IIGRG
Sbjct: 258 NKVEYAKQLIEEIMNSKHDMNEYGSL----------TDASKKIGEVIVPKHAVGSIIGRG 307
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
GETI+ L + SGARIQ + E + ER ++G M QI+ A MI ++++++
Sbjct: 308 GETIRRLTSESGARIQF---KIGEDHNAPERTAVISGTMEQIDRATRMITDLVNKS 360
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 108/197 (54%), Gaps = 38/197 (19%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR----DADADPHAATRPVEI 252
DS + +EVP++ VG++IG+ G++I +Q SG ++Q+++ D + P R +
Sbjct: 89 DSVIIDHLEVPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFDVNGKP---MRGCTL 145
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASG----------------AAE 296
G S+++KA+++I++++ +A G ++RG ++G
Sbjct: 146 TGPSSSVEKAKQMISSIVTKA---GETMSLSRGQPVYGSNGPSVLYSSSGSGAAGSDKTI 202
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-----PQHLPEGDGSKERIVRVTG 351
E+ +P K GL+IG+GGETIK LQ R+G ++ +I P LP + +R+ G
Sbjct: 203 TTEMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQESNQPSGLP-------KPLRIIG 255
Query: 352 DMRQIEIAQEMIKEVLS 368
+ ++E A+++I+E+++
Sbjct: 256 EPNKVEYAKQLIEEIMN 272
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 184 VDNSKSDDP---SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD 240
+ NSK D S TD S ++ VP + VG +IG+ G+TIR L SGA+IQ
Sbjct: 270 IMNSKHDMNEYGSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQF--KIG 327
Query: 241 ADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE- 299
D +A R I GT+ ID+A ++I ++ ++ S L G +
Sbjct: 328 EDHNAPERTAVISGTMEQIDRATRMITDLVNKS---ASVLLEESAYDCCNFEGCDSDIFY 384
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
+ VP K GL+IG+GGETIK + SGAR++L + P E++ + G QI A
Sbjct: 385 MHVPANKTGLVIGKGGETIKQINMDSGARVELSRETAPN---DWEKVFVIRGTPYQINHA 441
Query: 360 QEMIK 364
+I+
Sbjct: 442 THLIR 446
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
++VP+ VGLIIGRGGE+I +Q+ SG R+Q+ + +G R +TG +E A
Sbjct: 96 LEVPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFDVNGKPMRGCTLTGPSSSVEKA 155
Query: 360 QEMIKEVLSQTVRPSTLSGG 379
++MI ++++ +LS G
Sbjct: 156 KQMISSIVTKAGETMSLSRG 175
>gi|315042996|ref|XP_003170874.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
gi|311344663|gb|EFR03866.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
Length = 564
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 109/199 (54%), Gaps = 16/199 (8%)
Query: 149 FIDVKEETKEVTVKE---EETVKEEESVEPSNVVPQ--QVVDNSKSDDPSSTD-----DS 198
F+D E K + + ++V+++ E VV + Q ++ + D S D +
Sbjct: 224 FLDSAEHNKAIRLCRLTGTKSVRDKARAEIDRVVNENNQSRNDGRPSDRSGQDGGRSGEG 283
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+ KI VP+ VG++IG++G+T+R L SG +I I RD ++ RPV + G+
Sbjct: 284 DETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGES--INGLRPVTLTGSQQT 341
Query: 259 IDKAEKLINAVI-AEADAGGSPSLVA-RGLATAQASGAAEQVEIK--VPNEKVGLIIGRG 314
I +A++LI ++ ++ GG+ RG A +G +++ K +P E VG++IG+G
Sbjct: 342 IQRAKELILGIVESDTRTGGNQGQREPRGQAAGGENGGGDKLNDKMFIPKEYVGMVIGKG 401
Query: 315 GETIKGLQTRSGARIQLIP 333
GETI+ LQ+ SG +I ++P
Sbjct: 402 GETIRELQSLSGCKINILP 420
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 20/191 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
IE+ N VG++IG+ G+ +R ++ +GA++Q A+ + A R + GT S DKA
Sbjct: 193 IEIDNKYVGLIIGRQGENLRRIENETGARVQFL--DSAEHNKAIRLCRLTGTKSVRDKAR 250
Query: 264 KLINAVIAEADAG---GSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I+ V+ E + G PS + G ++ E +I VP+ VGL+IGR GET++
Sbjct: 251 AEIDRVVNENNQSRNDGRPSDRS-GQDGGRSGEGDETTKIMVPDRTVGLVIGRSGETVRD 309
Query: 321 LQTRSGARIQLIPQHLPEGDG---SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLS 377
L RSG RI + DG + R V +TG + I+ A+E+I ++ R
Sbjct: 310 LAERSGCRINIAR------DGESINGLRPVTLTGSQQTIQRAKELILGIVESDTRT---- 359
Query: 378 GGFNQQAYRPR 388
G NQ PR
Sbjct: 360 -GGNQGQREPR 369
>gi|147898765|ref|NP_001090218.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|47718038|gb|AAH70981.1| MGC78835 protein [Xenopus laevis]
gi|213626654|gb|AAI69815.1| Hypothetical protein MGC78835 [Xenopus laevis]
Length = 653
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 101/171 (59%), Gaps = 13/171 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + G+
Sbjct: 87 SVVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPD---RSCMLTGSPD 143
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ +A+ L++ ++ + G P+ G + SG A Q EI +P K GL+IG+GGET
Sbjct: 144 SVQEAKMLLDQIVEK----GRPT---PGFHHGEGSGNAVQ-EIMIPASKAGLVIGKGGET 195
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
IK LQ R+G ++ +I Q P+ G+ ++ +R+ GD +++ A+EM+ E++
Sbjct: 196 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRIAGDPYKVQQAKEMVLELIC 244
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 176 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQN-TGADKPLRIAGDPYKVQQ 234
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + G E +++ +P VG++IGR GE IK +
Sbjct: 235 AKEMVLELIC--DQGGFREVRNE---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKI 289
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DGS ER+ ++TG + + A E++ ++L
Sbjct: 290 QNDAGVRIQFKPD-----DGSTPERVAQITGPQDRCQHAAEIVNDLL 331
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D + P R +I G A
Sbjct: 268 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTPE---RVAQITGPQDRCQHAA 324
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
+++N ++ +G + G + G ++ VP+ K GLIIG+GG
Sbjct: 325 EIVNDLLRSVQSGNAGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFVVPSVKTGLIIGKGG 384
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK + +SGARI+L P D ++ + G +QI+ A+++++E +
Sbjct: 385 ETIKNISQQSGARIELQRNPPPNAD-PNVKLFTIRGSPQQIDYARQLVEEKI 435
>gi|449266765|gb|EMC77781.1| Far upstream element-binding protein 3, partial [Columba livia]
Length = 508
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + G
Sbjct: 65 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPE---RPCVLTGMPE 121
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 122 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQ--------EILIPASKVGLVIGKGGET 173
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 174 IKQLQERTGVKMIMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 223
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 121 ESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 180
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + R +
Sbjct: 181 TGVKMIMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RNDFS 237
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER+
Sbjct: 238 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISSERVA 290
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 291 QVMGLPDRCQHAAHIISELI 310
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D D ++ R +++G
Sbjct: 244 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD---DGISSERVAQVMGLPDRCQ 300
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I E D GS ++ + G +++ VP +K GL+IG
Sbjct: 301 HAAHIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYTVPADKCGLVIG 360
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 361 KGGENIKSINQQSGAHVELQRNPPPNTD-PGVRIFTIRGVPQQIELARHLIDE 412
>gi|189238744|ref|XP_972178.2| PREDICTED: similar to P-element somatic inhibitor [Tribolium
castaneum]
Length = 727
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ I+VP+ VG++IG+ G+ I LQ SG KIQ+ D+ P R + GT I
Sbjct: 97 LNEDIKVPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMPD---RVCSLSGTKEAI 153
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ-VEIKVPNEKVGLIIGRGGETI 318
++A++LI ++ + + G G VEI +P KVGLIIG+GGETI
Sbjct: 154 NRAKELIMNIVHQRGMNNMNQGMGGGGGGGGGGGGGRNFVEIMIPGPKVGLIIGKGGETI 213
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
K LQ +SGA++ +I Q P + +E+ +R++GD ++E A++++ +++++
Sbjct: 214 KQLQEKSGAKMVVI-QDGPNQE--QEKPLRISGDPSKVEYAKQLVYDLIAE 261
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 11/176 (6%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + +D +P+ I G S ++ A
Sbjct: 194 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQ--EKPLRISGDPSKVEYA 251
Query: 263 EKLINAVIAEADA------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++L+ +IAE + GG R G + E+ VP + VG++IG+GG+
Sbjct: 252 KQLVYDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGGGNEAEVLVPRQAVGVVIGKGGD 311
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
IK +Q +GAR+Q Q EG G ER ++G +Q+E A++ I+E++ R
Sbjct: 312 MIKKIQAETGARVQF-QQAREEGPG--ERRCYLSGTPKQVEQARQRIEELIDSVHR 364
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VGV+IGK GD I+ +Q +GA++Q + + P R + GT +++A
Sbjct: 294 EVLVPRQAVGVVIGKGGDMIKKIQAETGARVQFQQAREEGP--GERRCYLSGTPKQVEQA 351
Query: 263 EKLINAVIAEADAGGSPSLVAR---------------------------GLATAQASGAA 295
+ I +I + G + A
Sbjct: 352 RQRIEELIDSVHRRDGGDGPGQGRGRGRGGDRYDSRGGSNRNGGGQDYGGWDDRRQQQAP 411
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++V VP+ K G+IIGRGGETIK + +SGA +L + S E+ + GD Q
Sbjct: 412 QEVTFVVPSSKCGVIIGRGGETIKQINQQSGAHCEL-DRRSQNNQNSNEKTFIIRGDPDQ 470
Query: 356 IEIAQEMIKE 365
IE A+ +I +
Sbjct: 471 IEAAKRIISD 480
>gi|148232337|ref|NP_001090834.1| far upstream element (FUSE) binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|134023819|gb|AAI35377.1| fubp3 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P RP + GT
Sbjct: 77 AVMTEEYKVPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSGGMPE---RPCVLTGTPE 133
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 134 SIEQAKRLLGQIVDRCRNGPGFHNDMDGNSTVQ--------EILIPASKVGLVIGKGGET 185
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A++++ E++ +
Sbjct: 186 IKQLQERTGVKMIMIQDGPLPTG---ADKPLRITGDPFKVQQARDLVLEIIRE 235
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 133 ESIEQAKRLLGQIVDRCRNGPGFHNDMDGNSTVQEILIPASKVGLVIGKGGETIKQLQER 192
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A L+ +I E D + R +
Sbjct: 193 TGVKMIMIQDGPL-PTGADKPLRITGDPFKVQQARDLVLEIIREKDQADFRGI--RSDFS 249
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + VE+ VP VG+IIGR GE IK +Q +G RIQ P DG S ER
Sbjct: 250 SRIGGGS--VEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 302
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + A +I E++
Sbjct: 303 QVMGLPDLCQHAAHIINELI 322
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 12/173 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 256 SVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGLPDLCQ 312
Query: 261 KAEKLINAVIA---EADAGGSPSLV-----ARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +IN +I E D G+ +L +RG G+ +++ VP +K GL+IG
Sbjct: 313 HAAHIINELILTAQERDGFGALALARGRGRSRGDWNLSTPGSMQEITYTVPADKCGLVIG 372
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 373 KGGENIKNINQQSGAHVELQRNPPPNTD-PGVRIFTIRGVPQQIELARHLIDE 424
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%)
Query: 186 NSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA 245
S+ D ST S VP +K G++IGK G+ I+ + SGA +++ R+ +
Sbjct: 342 RSRGDWNLSTPGSMQEITYTVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDP 401
Query: 246 ATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQAS 292
R I G I+ A LI+ + GG S + A A+
Sbjct: 402 GVRIFTIRGVPQQIELARHLIDEKVGGPTIGGPSSFGQSAFSQAHAT 448
>gi|344237478|gb|EGV93581.1| Far upstream element-binding protein 1 [Cricetulus griseus]
Length = 449
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 74 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 130
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 131 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 182
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 183 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 230
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 130 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 184
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG
Sbjct: 185 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGG-----F 236
Query: 284 RGLATAQAS--GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
R + S G E +++ +P VG++IGR GE IK +Q +G RIQ P DG
Sbjct: 237 REVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DG 291
Query: 342 SK-ERIVRVTGDMRQIEIAQEMIKEVL 367
+ +RI ++TG + + A E+I ++L
Sbjct: 292 TTPDRIAQITGPPDRCQHAAEIITDLL 318
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
Q S + E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +
Sbjct: 70 QQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCML 125
Query: 350 TGDMRQIEIAQEMIKEVLSQ 369
TG ++ A+ ++ +++ +
Sbjct: 126 TGTPESVQSAKRLLDQIVEK 145
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 11/129 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 255 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 311
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 312 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGN 371
Query: 316 ETIKGLQTR 324
+K R
Sbjct: 372 PNMKLFTIR 380
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 106/179 (59%), Gaps = 7/179 (3%)
Query: 192 PSSTDDSTMSRK-IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
PSS +M + I VP+ VG++IG+ G+ I LQ +G KIQ+ ++ P R
Sbjct: 92 PSSNPLCSMCNEDIRVPDKMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLPE---RVC 148
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
+ G+ +++A++L+ +++ + + + + G VEI +P KVGLI
Sbjct: 149 TLTGSREAVNRAKELVLSIVNQRSRSEGIGDMNMSGSGSGMMGHPGFVEIMIPGPKVGLI 208
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IG+GGETIK LQ +SGA++ +I Q P + +E+ +R+TGD +++E A++++ E++++
Sbjct: 209 IGKGGETIKQLQEKSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEYAKQLVYELIAE 264
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 20/225 (8%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 197 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQ--EKPLRITGDPQKVEYA 254
Query: 263 EKLINAVIAEADA----GGSPSLVARGLATAQASGA------AEQVEIKVPNEKVGLIIG 312
++L+ +IAE + G R + SG ++ VE+ VP VG++IG
Sbjct: 255 KQLVYELIAEKEIQMFHRGGRGATDRTGNYSNDSGFNHGPANSDGVEVLVPRAAVGVVIG 314
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+GG+ IK +Q SGA++Q Q EG G +R ++G + +E A++ I+E++ +R
Sbjct: 315 KGGDMIKKIQAESGAKVQF-QQGREEGPG--DRKCLLSGKHQAVEQARQRIQELIDSVMR 371
Query: 373 PSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPY 417
G N R P G G R +P++ +D Q GP
Sbjct: 372 RDD---GRNNMGGRGSGPRGNGFGGNR--NPNEYGTWDRRQGGPM 411
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 42/245 (17%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VGV+IGK GD I+ +Q SGAK+Q + + P R + G +++A
Sbjct: 301 EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGP--GDRKCLLSGKHQAVEQA 358
Query: 263 ----EKLINAVIAEADAGGSPSLVARG-------------------LATAQASGAAEQVE 299
++LI++V+ D G ++ RG Q +++E
Sbjct: 359 RQRIQELIDSVMRRDD--GRNNMGGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKIE 416
Query: 300 --IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
VP+ K G+IIG+GGETIK + ++GA +L ++ E+I + G+ Q+E
Sbjct: 417 TTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSN---ENEKIFIIRGNPEQVE 473
Query: 358 IAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPY 417
A+ + E L S+ + Y P TG W P+QP + D G
Sbjct: 474 HAKRIFSEKLGMGPAGSSYTAAQGAVGYNPNWNTGYQAW------PNQPQSTD----GNN 523
Query: 418 PSQNP 422
P+Q P
Sbjct: 524 PNQAP 528
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I+VP++ VGLIIGRGGE I LQT +G +IQ+ PE G ER+ +TG +
Sbjct: 104 DIRVPDKMVGLIIGRGGEQITRLQTETGCKIQM----APESGGLPERVCTLTGSREAVNR 159
Query: 359 AQEMIKEVLSQTVR 372
A+E++ +++Q R
Sbjct: 160 AKELVLSIVNQRSR 173
>gi|148229383|ref|NP_001090529.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|25992563|gb|AAN77161.1| FUSE binding protein-like protein [Xenopus laevis]
Length = 610
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 101/171 (59%), Gaps = 13/171 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + G+
Sbjct: 87 SVVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPD---RSCMLTGSPD 143
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ +A+ L++ ++ + G P+ G + SG A Q EI +P K GL+IG+GGET
Sbjct: 144 SVQEAKMLLDQIVEK----GRPT---PGFHHGEGSGNAVQ-EIMIPASKAGLVIGKGGET 195
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
IK LQ R+G ++ +I Q P+ G+ ++ +R+ GD +++ A+EM+ E++
Sbjct: 196 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRIAGDPYKVQQAKEMVLELIC 244
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 12/167 (7%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +
Sbjct: 176 QEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRIAGDPYKVQQ 234
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++++ +I D GG + G E ++ + VG++IGR GE IK +
Sbjct: 235 AKEMVLELIC--DQGGFREVRNE---YGSRIGGNEGIDFLYHDVAVGIVIGRNGEMIKKI 289
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
Q +G RIQ P DGS ER+ ++TG + + A E++ ++L
Sbjct: 290 QNDAGVRIQFKPD-----DGSTPERVAQITGPQDRCQHAAEIVNDLL 331
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG++IG+ G+ I+ +Q ++G +IQ D + P R +I G A +++N ++
Sbjct: 275 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGSTPE---RVAQITGPQDRCQHAAEIVNDLL 331
Query: 271 AEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+G + G + G ++ VP+ K GLIIG+GGETIK +
Sbjct: 332 RSVQSGNAGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFVVPSVKTGLIIGKGGETIKNIS 391
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+SGARI+L P D ++ + G +QI+ A+++++E +
Sbjct: 392 QQSGARIELQRNPPPNAD-PNVKLFTIRGSPQQIDYARQLVEEKI 435
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD--ADADPHAATRPVEIIGTLSNIDKAE 263
VP+ K G++IGK G+TI+ + SGA+I++ R+ +ADP+ + I G+ ID A
Sbjct: 371 VPSVKTGLIIGKGGETIKNISQQSGARIELQRNPPPNADPN--VKLFTIRGSPQQIDYAR 428
Query: 264 KLINAVI 270
+L+ I
Sbjct: 429 QLVEEKI 435
>gi|384490900|gb|EIE82096.1| hypothetical protein RO3G_06801 [Rhizopus delemar RA 99-880]
Length = 482
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 117/210 (55%), Gaps = 24/210 (11%)
Query: 175 PSNVVPQQVVDNSKSDDPSST-----------DDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
P+ + +Q+VD++K+ + S + S S I +P KVG++IG+ G+TIR
Sbjct: 156 PARDMIRQMVDDAKATEASRVALPPGAYHYQGNLSGNSMMIRIPVPKVGLVIGRGGETIR 215
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
+ S AKI ++ D+ D + R + ++GT + I A++LI ++ GSP L
Sbjct: 216 EFEQQSRAKILLSSDSSNDINN-ERAITLVGTEAAIQHAKRLIEDIVY-----GSPDLAM 269
Query: 284 RGLATAQASGAA----EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEG 339
G + A +++ + +P+ VGLIIGRGGETI+ Q +SGAR+++ L
Sbjct: 270 PGYSQYGFGPAGGPNGQRIYVPIPSTVVGLIIGRGGETIRYFQEQSGARVKV---DLTGD 326
Query: 340 DGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
++ER V ++G+ + + +A+ +++E +++
Sbjct: 327 PNAEERNVCISGEPQALAVAKRLVEEKVAE 356
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSG-AKIQITRDADADPHAATRPVEIIGT 255
+S+ + +VPN+ VG+LIGK G+ ++ ++ SG +K+Q
Sbjct: 115 NSSRQDEYKVPNHMVGLLIGKGGENLKKIERMSGVSKVQFA------------------- 155
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVAR--GLATAQASGAAEQVEIKVPNEKVGLIIGR 313
A +I ++ +A A S VA G Q + + + I++P KVGL+IGR
Sbjct: 156 -----PARDMIRQMVDDAKA-TEASRVALPPGAYHYQGNLSGNSMMIRIPVPKVGLVIGR 209
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GGETI+ + +S A+I L D + ER + + G I+ A+ +I++++
Sbjct: 210 GGETIREFEQQSRAKILLSSD--SSNDINNERAITLVGTEAAIQHAKRLIEDIV 261
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 292 SGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSG-ARIQLIP 333
+ ++ Q E KVPN VGL+IG+GGE +K ++ SG +++Q P
Sbjct: 114 TNSSRQDEYKVPNHMVGLLIGKGGENLKKIERMSGVSKVQFAP 156
>gi|26325406|dbj|BAC26457.1| unnamed protein product [Mus musculus]
Length = 306
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 115 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 171
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 172 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 223
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 224 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 271
>gi|410922393|ref|XP_003974667.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 559
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 92/164 (56%), Gaps = 15/164 (9%)
Query: 205 EVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEK 264
+VP+ VG +IG+ G+ I +Q SG KIQI D+ RP + GT +I+ A++
Sbjct: 87 KVPDRMVGFIIGRGGEQINRIQLESGCKIQIAADSGG---LMERPCSLTGTPESIEHAKR 143
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+ ++ G P G G A E+ +P KVGL+IGRGG+TIK LQ R
Sbjct: 144 LLVQIVDRCRNG--PGFHGDG------EGGASVQEMLIPASKVGLVIGRGGDTIKQLQER 195
Query: 325 SGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+G ++ +I +P G ++ +R++GD +++ A+E++ EV+
Sbjct: 196 AGVKMMMIQDGPMPTG---ADKPLRISGDPYKVQAARELVLEVI 236
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDS---TMSRKIEVPNNKVGVLIGKAGDTIRYLQY 227
ES+E + + Q+VD + + P D +++ +P +KVG++IG+ GDTI+ LQ
Sbjct: 136 ESIEHAKRLLVQIVDRCR-NGPGFHGDGEGGASVQEMLIPASKVGLVIGRGGDTIKQLQE 194
Query: 228 NSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA 287
+G K+ + +D P A +P+ I G + A +L+ VI + D G
Sbjct: 195 RAGVKMMMIQDGPM-PTGADKPLRISGDPYKVQAARELVLEVIRDKDGD-----FRSGRT 248
Query: 288 TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERI 346
A +++ VP VG++IGR GE IK +Q +G RIQ DG S ER+
Sbjct: 249 DFGARLGGSNIDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQ-----FKADDGISPERV 303
Query: 347 VRVTGDMRQIEIAQEMIKEVL 367
V G + + A +I E++
Sbjct: 304 AMVMGQPDRCQHAVHLINELI 324
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 13/182 (7%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP VG++IG+ G+ I+ +Q ++G +IQ D P R ++G A L
Sbjct: 263 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKADDGISPE---RVAMVMGQPDRCQHAVHL 319
Query: 266 INAVI--AEADAGGSPSLVARGLA-----TAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
IN +I A+ G S +L + T + G ++V + +K GL+IG+GGETI
Sbjct: 320 INELIQTAQERDGFSSALRGGRVRGRGDWTVGSPGPLQEVTYTISADKCGLVIGKGGETI 379
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K + +SGA ++L P D R+ + G +Q+++A+++I + + + S +G
Sbjct: 380 KSINQQSGAHVELQRNPPPSTD-HNTRVFTIRGSAQQMDVARQLIDDKIGGSGIMS--NG 436
Query: 379 GF 380
GF
Sbjct: 437 GF 438
>gi|403256748|ref|XP_003921014.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Saimiri boliviensis boliviensis]
Length = 611
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 15/165 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 178 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 234
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G S + Q EI +P KVGL+IGRGGET
Sbjct: 235 SIEQAKRLLGQIVDRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 286
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQE 361
IK LQ R+G ++ +I LP G ++ +R+TGD ++++ ++
Sbjct: 287 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQVGKK 328
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 52/243 (21%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IG+ G+TI+ LQ
Sbjct: 234 ESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 293
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEK------------------------ 264
+G K+ + +D P A +P+ I G + +K
Sbjct: 294 TGVKMVMIQDGPL-PTGADKPLRITGDPFKVQVGKKPWHDGISPERAAQVMGPPDRCQHA 352
Query: 265 --LINAVIA---EADAGGSPSLVARGLATAQ------------ASGAAEQVEIKVPNEKV 307
+IN +I E D G GLA A+ A G +++ VP +K
Sbjct: 353 AHIINELILTAQERDGFG-------GLAVARGRGRGRGDWSVGAPGGVQEITYTVPADKC 405
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GL+IG+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E +
Sbjct: 406 GLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGIPQQIEVARQLIDEKV 464
Query: 368 SQT 370
T
Sbjct: 465 GGT 467
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP++ VG IIGRGGE I +Q SG +IQ+ E G ER +TG IE
Sbjct: 183 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQI----ASESSGIPERPCVLTGTPESIEQ 238
Query: 359 AQEMIKEVLSQT 370
A+ ++ +++ +
Sbjct: 239 AKRLLGQIVDRC 250
>gi|354502188|ref|XP_003513169.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Cricetulus griseus]
Length = 481
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ +++ +P +KVG++IGK G+TI+ LQ
Sbjct: 45 ESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQER 104
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG
Sbjct: 105 TGVKMVMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RGDFA 161
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++A G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 162 SRAGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 214
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 215 QVMGPPDRCQHAAHIINELI 234
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 15/160 (9%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I++A++L+ ++
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESIEQAKRLLGQIV 58
Query: 271 AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
G G +T Q E+ +P KVGL+IG+GGETIK LQ R+G ++
Sbjct: 59 DRCRNGPGFHNDIDGNSTIQ--------ELLIPASKVGLVIGKGGETIKQLQERTGVKMV 110
Query: 331 LIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 111 MIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 147
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 168 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 224
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ G +++ VP +
Sbjct: 225 HAAHIINELILTAQERDGLG-------GLAVARGRGRGRGDWSVGTPGGVQEITYTVPAD 277
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 278 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQIEVARHLIDE 336
>gi|327264009|ref|XP_003216809.1| PREDICTED: far upstream element-binding protein 2-like [Anolis
carolinensis]
Length = 699
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 103/176 (58%), Gaps = 18/176 (10%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
ST++ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G+
Sbjct: 134 STVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGSPE 190
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG PS + +G + EI +P K GL+IG+GGET
Sbjct: 191 SVQKAKMMLDDIVSRG-RGGPPSQFHDN--SNGQNGTVQ--EIMIPAGKAGLVIGKGGET 245
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 246 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 295
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST-----MSRKIEVPNNKVGVLIGKAGDTIRYL 225
ESV+ + ++ +V + PS D++ ++I +P K G++IGK G+TI+ L
Sbjct: 190 ESVQKAKMMLDDIVSRGRGGPPSQFHDNSNGQNGTVQEIMIPAGKAGLVIGKGGETIKQL 249
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG G
Sbjct: 250 QERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------G 302
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-E 344
S +++ VP VG++IGR GE IK +Q +G RIQ + DG+ E
Sbjct: 303 DRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGPE 357
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
+I + G + E A +I ++L
Sbjct: 358 KIAHIMGPPDRCEHAARIINDLL 380
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 317 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 373
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE--------QVEIKVPNEKVGLIIGRGG 315
++IN ++ +G + + G + ++ +P K GL+IGRGG
Sbjct: 374 RIINDLLQSLRSGPPGPPGSGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGG 433
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 434 ENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 484
>gi|55727889|emb|CAH90697.1| hypothetical protein [Pongo abelii]
Length = 297
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 13/109 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
LQ +G K+ + +D + A +P+ I G + +A++++ +I +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIRD 257
>gi|307211366|gb|EFN87498.1| Far upstream element-binding protein 1 [Harpegnathos saltator]
Length = 751
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 104/183 (56%), Gaps = 6/183 (3%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S+ SS + I VP+ VG++IG+ G+ I LQ +G KIQ+ ++ P
Sbjct: 90 SRPQTSSSNVGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPE-- 147
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEK 306
R + G+ +++A++L+ +++ + + G G VEI +P K
Sbjct: 148 -RVCTLTGSREAVNRAKELVLSIVNQRSRSEGIGDMNMGGGGGGMMGHPGFVEIMIPGPK 206
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VGLIIG+GGETIK LQ +SGA++ +I Q P + +E+ +R+TGD +++E A++++ E+
Sbjct: 207 VGLIIGKGGETIKQLQEKSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEHAKQLVYEL 263
Query: 367 LSQ 369
+++
Sbjct: 264 IAE 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 99/183 (54%), Gaps = 22/183 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 199 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQ--EKPLRITGDPQKVEHA 256
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGA-------------AEQVEIKVPNEKVGL 309
++L+ +IAE + + RG ++ G + VE+ VP VG+
Sbjct: 257 KQLVYELIAEKEM----QMFHRGGRGSERPGNYTNDNGFNHGPANNDGVEVLVPRAAVGV 312
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IG+GG+ IK +Q SGA++Q Q E DG +R ++G + +E A++ I+E++
Sbjct: 313 VIGKGGDMIKKIQAESGAKVQF--QQGRE-DGPGDRKCLLSGKHQAVEQARQRIQELIDS 369
Query: 370 TVR 372
+R
Sbjct: 370 VMR 372
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
DN + P++ D ++ VP VGV+IGK GD I+ +Q SGAK+Q + + P
Sbjct: 288 DNGFNHGPANNDGV----EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGP- 342
Query: 245 AATRPVEIIGTLSNIDKA----EKLINAVIAEADAGGSPSLVARGLATA----------- 289
R + G +++A ++LI++V+ D +
Sbjct: 343 -GDRKCLLSGKHQAVEQARQRIQELIDSVMRRDDGRNNMGGRGGPRGNGFGGSRNPNEYG 401
Query: 290 -----QASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS 342
Q +++E VP+ K G+IIG+GGETIK + ++GA +L ++
Sbjct: 402 SWDRRQGGPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQ---SNE 458
Query: 343 KERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLS 377
E+I + G+ Q+E A+ + E L +S
Sbjct: 459 NEKIFIIRGNPEQVEHAKRIFSEKLGMVCLMMFVS 493
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 271 AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
A + G S S +R ++ G +I+VP++ VGLIIGRGGE I LQ+ +G +IQ
Sbjct: 78 ANSSIGDSGSQSSRPQTSSSNVGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQ 137
Query: 331 LIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+ PE G ER+ +TG + A+E++ +++Q R
Sbjct: 138 M----APESGGLPERVCTLTGSREAVNRAKELVLSIVNQRSR 175
>gi|355689346|gb|AER98803.1| far upstream element binding protein 3 [Mustela putorius furo]
Length = 450
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 99/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G +T Q EI +P KVGL+IG+GGET
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------EILIPASKVGLVIGKGGET 184
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 185 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 234
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IGK G+TI+ LQ
Sbjct: 132 ESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 191
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG
Sbjct: 192 TGVKMVMIQDGPL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RGDFG 248
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
A+A G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 249 ARAGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 301
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 302 QVMGPPDRCQHAAHVINELI 321
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 311
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------------ASGAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ A G +++ VP +
Sbjct: 312 HAAHVINELILTAQERDGFG-------GLAVARGRGRGRGDWSVGAPGGIQEITYTVPAD 364
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D R+ + G +QIE+A+ +I E
Sbjct: 365 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTD-PNLRMFTIRGIPQQIEVARHLIDE 423
Query: 366 VLSQT 370
+ T
Sbjct: 424 KVGGT 428
>gi|431922364|gb|ELK19455.1| Far upstream element-binding protein 2 [Pteropus alecto]
Length = 709
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 105 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 161
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 162 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 217
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 218 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 267
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 161 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 220
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 221 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 273
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 274 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 328
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 329 EKIAHIMGPPDRCEHAARIINDLL-QSLR 356
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 289 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 345
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 346 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 405
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 406 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 457
>gi|297275911|ref|XP_001090850.2| PREDICTED: far upstream element-binding protein 2 [Macaca mulatta]
Length = 686
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 82 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 138
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 139 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 194
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 195 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 247
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 248 ----GGFGDRNEYGSRIGGG 263
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 138 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 197
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 198 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 250
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 251 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 305
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 306 EKIAHIMGPPDRCEHAARIINDLL-QSLR 333
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 266 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 322
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 323 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 382
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 383 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 434
>gi|440901061|gb|ELR52061.1| Far upstream element-binding protein 2, partial [Bos grunniens
mutus]
Length = 664
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 117 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 172
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 173 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 225
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 226 ----GGFGDRNEYGSRIGGG 241
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 116 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 175
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 176 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 228
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 229 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 283
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 284 EKIAHIMGPPDRCEHAARIINDLL-QSLR 311
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 244 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 300
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 301 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 360
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 361 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 412
>gi|148706278|gb|EDL38225.1| mCG140911, isoform CRA_b [Mus musculus]
Length = 773
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 169 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 225
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 226 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 281
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 282 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 334
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 335 ----GGFGDRNEYGSRVGGG 350
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 225 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 284
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 285 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 337
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 338 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 392
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 393 EKIAHIMGPPDRCEHAARIINDLL-QSLR 420
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 353 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 409
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 410 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 469
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 470 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 521
>gi|350529341|ref|NP_001123831.2| KH-type splicing regulatory protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 103/176 (58%), Gaps = 18/176 (10%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+M+ + VP+ VG++IG+ G+ I +Q SG K+QI+ D+ P R V + G+
Sbjct: 92 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPE---RVVSLTGSPD 148
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ L++ ++A GG PS + +G+ + EI +P K GLIIG+GGET
Sbjct: 149 SVQKAKMLLDDIVARG-RGGPPSQFHDN--SNGQNGSLQ--EIMIPAGKAGLIIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ G+ +++ A EM+ ++L +
Sbjct: 204 IKQLQERAGVKMILIQ------DGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLRE 253
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSR-----KIEVPNNKVGVLIGKAGDTIRYL 225
+SV+ + ++ +V + PS D++ + +I +P K G++IGK G+TI+ L
Sbjct: 148 DSVQKAKMLLDDIVARGRGGPPSQFHDNSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQL 207
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G K+ + +D + + +P+ I+G + +A +++ ++ E D
Sbjct: 208 QERAGVKMILIQDGSQNTNM-DKPLRIVGEPFKVQQACEMVMDLLRERDQANFDR--NEY 264
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-E 344
+ G +++ VP VG++IGR G+ IK +Q +G RIQ + DG+ +
Sbjct: 265 GSRGGGGGGGGGIDVPVPRHSVGVVIGRNGDMIKKIQNDAGVRIQ-----FKQDDGTGPD 319
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
+I + G + E A +I ++L
Sbjct: 320 KIAHIMGPPDRCEHAARIISDLL 342
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG+ GD I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 279 VPVPRHSVGVVIGRNGDMIKKIQNDAGVRIQFKQDDGTGPD---KIAHIMGPPDRCEHAA 335
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE--------QVEIKVPNEKVGLIIGRGG 315
++I+ ++ G + G + ++ +P K GL+IGRGG
Sbjct: 336 RIISDLLQSLKTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E +K + ++GA +++ Q P GD ++ + G+ +QI+ A+++I+E +
Sbjct: 396 ENVKAINQQTGAFVEISRQPPPNGD-PNFKMFTIRGNPQQIDHAKQLIEEKI 446
>gi|149716720|ref|XP_001496194.1| PREDICTED: far upstream element-binding protein 2 [Equus caballus]
Length = 667
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 63 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 119
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 120 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 175
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 176 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 225
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 119 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 178
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 179 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 231
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 232 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 286
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 287 EKIAHIMGPPDRCEHAARIINDLL-QSLR 314
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 247 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 303
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 304 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 363
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 364 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 415
>gi|14043859|gb|AAH07874.1| FUBP3 protein [Homo sapiens]
Length = 261
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 16 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 72
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G P G S + Q EI +P KVGL+IGRGGET
Sbjct: 73 SIEQAKRLLGQIVDRCRNG--P-----GFHNDIDSNSTIQ-EILIPASKVGLVIGRGGET 124
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 125 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 174
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IG+ G+TI+ LQ
Sbjct: 72 ESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 131
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG
Sbjct: 132 TGVKMVMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RGDFN 188
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P
Sbjct: 189 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKP 231
>gi|397497276|ref|XP_003846118.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Pan paniscus]
Length = 738
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 169 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 225
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 226 SVQKAKMMLDDIVSRGR-GGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 281
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 282 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 331
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 225 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 284
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 285 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 337
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 338 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 392
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 393 EKIAHIMGPPDRCEHAARIINDLL-QSLR 420
>gi|395512937|ref|XP_003760689.1| PREDICTED: far upstream element-binding protein 2 [Sarcophilus
harrisii]
Length = 777
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 174 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 230
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P Q +G + EI +P K GL+IG+GGET
Sbjct: 231 SVQKAKMMLDDIVSRG-RGGPPGQFHDNSNGGQ-NGTVQ--EIMIPAGKAGLVIGKGGET 286
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 287 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 336
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D++ ++I +P K G++IGK G+TI+
Sbjct: 230 ESVQKAKMMLDDIVSRGRGGPPGQFHDNSNGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 289
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 290 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 342
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q+ +G RIQ + DG+
Sbjct: 343 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQSDAGVRIQ-----FKQDDGTGP 397
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 398 EKIAHIMGPPDRCEHAARIINDLL-QSLR 425
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 358 VPVPRHSVGVVIGRSGEMIKKIQSDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 414
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 415 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 474
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 475 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 526
>gi|350529339|ref|NP_001121330.2| KH-type splicing regulatory protein precursor [Xenopus laevis]
Length = 732
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 102/176 (57%), Gaps = 18/176 (10%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+M+ + VP+ VG++IG+ G+ I +Q SG K+QI+ D+ P R V + G+
Sbjct: 150 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPE---RVVSLTGSPD 206
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ A+ L++ ++A GG PS ++ +G+ + EI +P K GLIIG+GGET
Sbjct: 207 AVQNAKMLLDDIVARG-RGGPPSQFHD--SSNGQNGSLQ--EIMIPAGKAGLIIGKGGET 261
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ G+ +++ A EM+ ++L +
Sbjct: 262 IKQLQERAGVKMILIQ------DGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLKE 311
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSR-----KIEVPNNKVGVLIGKAGDTIRYL 225
++V+ + ++ +V + PS DS+ + +I +P K G++IGK G+TI+ L
Sbjct: 206 DAVQNAKMLLDDIVARGRGGPPSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQL 265
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G K+ + +D + + +P+ I+G + +A +++ ++ E D
Sbjct: 266 QERAGVKMILIQDGSQNTNM-DKPLRIVGEPFKVQQACEMVMDLLKERDQANFDR--NEY 322
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-E 344
+ G +++ VP VG++IGR G+ IK +Q +G RIQ + DG+ +
Sbjct: 323 GSRGGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQ-----FKQDDGTGPD 377
Query: 345 RIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+I + G + E A +I ++L Q++R
Sbjct: 378 KIAHIMGPPDRCEHAARIIGDLL-QSLR 404
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++GD I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 337 VPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGPD---KIAHIMGPPDRCEHAA 393
Query: 264 KLINAVI--------AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ G P RG ++ +P K GL+IGRGG
Sbjct: 394 RIIGDLLQSLRTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGG 453
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E +K + ++GA +++ Q P GD ++ + G+ +QI+ A+++I+E +
Sbjct: 454 ENVKAINQQTGAFVEISRQPPPNGD-PNFKMFTIRGNPQQIDHAKQLIEEKI 504
>gi|74224349|dbj|BAE33750.1| unnamed protein product [Mus musculus]
Length = 748
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 200
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 201 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 256
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 257 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 309
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 310 ----GGFGDRNEYGSRVGGG 325
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 200 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 259
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 260 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 312
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 313 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 367
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A + ++L Q++R
Sbjct: 368 EKIAHIMGPPDRCEHAARIFNDLL-QSLR 395
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++ N ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 385 RIFNDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 496
>gi|171847306|gb|AAI61696.1| LOC100158419 protein [Xenopus laevis]
Length = 674
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 102/176 (57%), Gaps = 18/176 (10%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+M+ + VP+ VG++IG+ G+ I +Q SG K+QI+ D+ P R V + G+
Sbjct: 92 SSMTEEYRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPE---RVVSLTGSPD 148
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ A+ L++ ++A GG PS ++ +G+ + EI +P K GLIIG+GGET
Sbjct: 149 AVQNAKMLLDDIVARG-RGGPPSQFHD--SSNGQNGSLQ--EIMIPAGKAGLIIGKGGET 203
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ G+ +++ A EM+ ++L +
Sbjct: 204 IKQLQERAGVKMILIQ------DGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLKE 253
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSR-----KIEVPNNKVGVLIGKAGDTIRYL 225
++V+ + ++ +V + PS DS+ + +I +P K G++IGK G+TI+ L
Sbjct: 148 DAVQNAKMLLDDIVARGRGGPPSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQL 207
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G K+ + +D + + +P+ I+G + +A +++ ++ E D
Sbjct: 208 QERAGVKMILIQDGSQNTNM-DKPLRIVGEPFKVQQACEMVMDLLKERDQANFDR--NEY 264
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-E 344
+ G +++ VP VG++IGR G+ IK +Q +G RIQ + DG+ +
Sbjct: 265 GSRGGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQ-----FKQDDGTGPD 319
Query: 345 RIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+I + G + E A +I ++L Q++R
Sbjct: 320 KIAHIMGPPDRCEHAARIIGDLL-QSLR 346
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++GD I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 279 VPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGPD---KIAHIMGPPDRCEHAA 335
Query: 264 KLINAVI--------AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ G P RG ++ +P K GL+IGRGG
Sbjct: 336 RIIGDLLQSLRTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGG 395
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E +K + ++GA +++ Q P GD ++ + G+ +QI+ A+++I+E +
Sbjct: 396 ENVKAINQQTGAFVEISRQPPPNGD-PNFKMFTIRGNPQQIDHAKQLIEEKI 446
>gi|19424312|ref|NP_598286.1| far upstream element-binding protein 2 [Rattus norvegicus]
gi|37078084|sp|Q99PF5.1|FUBP2_RAT RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=MAP2 RNA trans-acting protein 1; Short=MARTA1
gi|12584134|gb|AAG59811.1|AF308818_1 MAP2 RNA trans-acting protein MARTA1 [Rattus norvegicus]
Length = 721
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 200
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 201 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 256
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 257 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 309
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 310 ----GGFGDRNEYGSRVGGG 325
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 200 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 259
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 260 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 312
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 313 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 367
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 368 EKIAHIMGPPDRCEHAARIINDLL-QSLR 395
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 385 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 496
>gi|410904074|ref|XP_003965518.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 569
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 15/165 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+VP+ VG +IGK G+ I +Q SG KIQI D+ RP + G+ NI+ A+
Sbjct: 83 FKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASDSGG---MLDRPCTLTGSPENIELAK 139
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+N ++ + G P +G+ +Q I +P KVGL+IG+ GETIK LQ
Sbjct: 140 RLLNEIVEQCRYG--PGF----HCDMDGNGSIQQ--ILIPANKVGLVIGKKGETIKQLQE 191
Query: 324 RSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
R+G ++ +I LP G ++ +R+TGD ++++ A+E++ +++
Sbjct: 192 RTGVQMIMIQDDPLPTG---ADKPLRITGDPQKVQQARELVVKLI 233
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
E++E + + ++V+ + D + ++I +P NKVG++IGK G+TI+ LQ
Sbjct: 133 ENIELAKRLLNEIVEQCRYGPGFHCDMDGNGSIQQILIPANKVGLVIGKKGETIKQLQER 192
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G ++ + +D D P A +P+ I G + +A +L+ +I + D G V R
Sbjct: 193 TGVQMIMIQD-DPLPTGADKPLRITGDPQKVQQARELVVKLIRDKDQG--DFRVGRADFG 249
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G+ +++ VP VG+IIGR GE I+ +Q +G RIQ + DG S ER+
Sbjct: 250 SKMGGST--LDVVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQ-----FKQDDGISPERVA 302
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + A +I E++
Sbjct: 303 QVMGQLDHCHHAVHIINELV 322
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 188 KSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
++D S ST+ + VP VG++IG+ G+ IR +Q ++G +IQ +D P
Sbjct: 245 RADFGSKMGGSTLD--VVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISPE--- 299
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQA----SGAAEQVEIKVP 303
R +++G L + A +IN ++ A V SG ++V VP
Sbjct: 300 RVAQVMGQLDHCHHAVHIINELVQTAQERDGFGGVMGRRGRGDCNMGGSGGLQEVTYAVP 359
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+K GL+IG+GGETIK ++ +S A ++L P D S RI + G +Q+E A+++I
Sbjct: 360 ADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPSV-RIFSIRGTPQQLEKARQLI 418
Query: 364 KEVLSQTVRPSTLSGGFN--QQAYRPRVPTGPPQWGPR 399
E + V S G N Q P PPQ GP+
Sbjct: 419 DERIGVGVMGGNSSFGMNPYNQG-----PATPPQHGPQ 451
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+ KVP++ VG IIG+GGE I +Q SG +IQ+ + G +R +TG IE+
Sbjct: 82 DFKVPDKMVGFIIGKGGEQISRIQLESGCKIQI----ASDSGGMLDRPCTLTGSPENIEL 137
Query: 359 AQEMIKEVLSQT 370
A+ ++ E++ Q
Sbjct: 138 AKRLLNEIVEQC 149
>gi|1575607|gb|AAC50892.1| FUSE binding protein 2, partial [Homo sapiens]
Length = 652
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 21/199 (10%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 87 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 143
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 144 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 199
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L R
Sbjct: 200 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDIL----RN 249
Query: 374 STLSGGFNQQAYRPRVPTG 392
T +G ++ Y R+ G
Sbjct: 250 VTKAGFGDRNEYGSRIGGG 268
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 143 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 202
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ G
Sbjct: 203 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRNVTKAGF------ 255
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 256 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 310
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 311 EKIAHIMGPPDRCEHAARIINDLL-QSLR 338
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 13/172 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 271 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 327
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS-------GAAEQVEIKVPNEKVGLIIGRGGE 316
++IN ++ +G G+ + G ++ +P K GL+IGRGGE
Sbjct: 328 RIINDLLQSLRSGPPGPPGGPGIPGGRGRGRGQGNWGPGGEMTFSIPTHKCGLVIGRGGE 387
Query: 317 TIKGLQTRSGARIQLIPQHLPEGD-GSKERIVRVTGDMRQIEIAQEMIKEVL 367
+K + ++GA +++ Q P G SK I+R G +QI+ +++I+E +
Sbjct: 388 NVKAINQQTGAFVEISRQLPPTGTPTSKLFIIR--GSPQQIDHCRQLIEEKI 437
>gi|163954948|ref|NP_034743.3| far upstream element-binding protein 2 [Mus musculus]
gi|341940718|sp|Q3U0V1.2|FUBP2_MOUSE RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP
Length = 748
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 200
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 201 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 256
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 257 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 309
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 310 ----GGFGDRNEYGSRVGGG 325
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 200 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 259
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 260 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 312
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 313 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 367
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 368 EKIAHIMGPPDRCEHAARIINDLL-QSLR 395
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 385 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 496
>gi|157115059|ref|XP_001652540.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|157115061|ref|XP_001652541.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|108877074|gb|EAT41299.1| AAEL007042-PA [Aedes aegypti]
gi|108877075|gb|EAT41300.1| AAEL007042-PB [Aedes aegypti]
Length = 706
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +KVG++IGK G+TI+ LQ SGAK+ I +D +P+ I G ++
Sbjct: 160 QEIMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQDGPG--QEMEKPLRISGDPQKVEH 217
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++L+ +I E D + A+ A +G EQ E+ VP VG++IG+GG+ IK +
Sbjct: 218 AKQLVFDLIQEKD-----NYNAQRQQQAPMNG-TEQAEVFVPKSAVGVVIGKGGDMIKKI 271
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
Q SG ++Q I GDG +R V G Q+E + MI+E++ R
Sbjct: 272 QGDSGCKLQFIQ---GRGDGPGDRRCIVQGSRAQVEEGKRMIEELIESVQR 319
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 36/201 (17%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VGV+IGK GD I+ +Q +SG K+Q + P R + G+ + +++
Sbjct: 249 EVFVPKSAVGVVIGKGGDMIKKIQGDSGCKLQFIQGRGDGP--GDRRCIVQGSRAQVEEG 306
Query: 263 EKLINAVIAEADAGGSPSLVA------------------RGLATAQASG----------- 293
+++I +I RG +G
Sbjct: 307 KRMIEELIESVQRREQGGGGRGGRGGDRDDRGDRGDRPHRGGRDNHDNGNNGQYGNDFSG 366
Query: 294 ---AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVT 350
E+ VP K G+IIGRGG+TIK + +SGA ++ + + E+
Sbjct: 367 PQVTREEYTFTVPVNKCGIIIGRGGDTIKQINQQSGAHTEM--DRKASANQTNEKTFTTK 424
Query: 351 GDMRQIEIAQEMIKEVLSQTV 371
G+ QIE A+ +I++ ++ +
Sbjct: 425 GEPHQIEEAKRLIQDKINMEI 445
>gi|119608345|gb|EAW87939.1| hCG31253, isoform CRA_b [Homo sapiens]
Length = 530
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
ES+E + + Q+VD ++ + D ++ ++I +P +KVG++IG+ G+TI+ LQ
Sbjct: 45 ESIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 104
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G K+ + +D P A +P+ I G + +A +++ +I E D + RG
Sbjct: 105 TGVKMVMIQDGPL-PTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGV--RGDFN 161
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G + +E+ VP VG++IGR GE IK +Q +G RIQ P DG S ER
Sbjct: 162 SRMGGGS--IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAA 214
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G + + A +I E++
Sbjct: 215 QVMGPPDRCQHAAHIISELI 234
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 15/160 (9%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG +IG+ G+ I +Q SG KIQI ++ P RP + GT +I++A++L+ ++
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPESIEQAKRLLGQIV 58
Query: 271 AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
G G S + Q EI +P KVGL+IGRGGETIK LQ R+G ++
Sbjct: 59 DRCRNG-------PGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGETIKQLQERTGVKMV 110
Query: 331 LIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 111 MIQDGPLPTG---ADKPLRITGDAFKVQQAREMVLEIIRE 147
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 168 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 224
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 225 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 284
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 285 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 341
>gi|355697562|gb|AES00713.1| KH-type splicing regulatory protein [Mustela putorius furo]
Length = 663
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 117 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 172
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 173 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 225
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 226 ----GGFGDRNEYGSRIGGG 241
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 116 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 175
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 176 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 228
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 229 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 283
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 284 EKIAHIMGPPDRCEHAARIINDLL-QSLR 311
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 244 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 300
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 301 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 360
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 361 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 412
>gi|395750296|ref|XP_002828567.2| PREDICTED: far upstream element-binding protein 2 [Pongo abelii]
Length = 757
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 189 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 245
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 246 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 301
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 302 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 351
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 245 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 304
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 305 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 357
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 358 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 412
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 413 EKIAHIMGPPDRCEHAARIINDLL-QSLR 440
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 373 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 429
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 430 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 489
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 490 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 541
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 123/225 (54%), Gaps = 27/225 (12%)
Query: 165 ETVKEEESVEPSNVVPQQVV----DNSKSDDPSSTD--DSTMSRKIEVPNNKVGVLIGKA 218
E V E E + ++++P ++ ++S +D P S + I VP+ VG++IG+
Sbjct: 53 EDVSEPEPKKLASIMPDPLLSLRGNSSAADQPVSAAALGGICNEDIRVPDKMVGLIIGRG 112
Query: 219 GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGS 278
G+ I LQ +G KIQ+ ++ P R + G+ +++A++L+ +++ + G
Sbjct: 113 GEQITRLQSETGCKIQMAAESGGMPE---RTCTLTGSRDAVNRAKELVQSIVNQRVKPGE 169
Query: 279 PSL-------------VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+ + + + +G VEI +P KVGLIIG+GGETIK LQ +S
Sbjct: 170 DLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKS 229
Query: 326 GARIQLIPQHLPEGDG-SKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
GA++ +I +G G +E+ +R+TGD +++E A++++ E++++
Sbjct: 230 GAKMVVI----QDGPGQEQEKPLRITGDPQKVEHAKQLVYELIAE 270
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 46/202 (22%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + +D +P+ I G ++ A
Sbjct: 203 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQ--EKPLRITGDPQKVEHA 260
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ------------------------- 297
++L+ +IAE + L RG ++ + Q
Sbjct: 261 KQLVYELIAEKEM----QLYNRGTRNFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSW 316
Query: 298 ----------VEIK--VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKER 345
VE VP+ K G+IIG+GG TIK + ++GA +L ++ P D K
Sbjct: 317 EGNRPAGEGKVEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRN-PGTDTDKFF 375
Query: 346 IVRVTGDMRQIEIAQEMIKEVL 367
+R G Q+E A+ + E L
Sbjct: 376 TIR--GTPEQVEHAKRVFAEKL 395
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 287 ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI 346
+A A G +I+VP++ VGLIIGRGGE I LQ+ +G +IQ+ E G ER
Sbjct: 85 VSAAALGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQM----AAESGGMPERT 140
Query: 347 VRVTGDMRQIEIAQEMIKEVLSQTVRP 373
+TG + A+E+++ +++Q V+P
Sbjct: 141 CTLTGSRDAVNRAKELVQSIVNQRVKP 167
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD---ADADPHAATRPVEIIGTLSNIDKA 262
VP+NK G++IGK G TI+ + +GA ++ R D D R GT ++ A
Sbjct: 333 VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIR-----GTPEQVEHA 387
Query: 263 EKLINAVIAEADAG-------GSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+++ + G P+ G G +V VP K G+IIG+GG
Sbjct: 388 KRVFAEKLGGGMGSSSNGYPTGRPN--EYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGG 445
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK + ++GA +L ++ G++ E+ + G Q+E AQ + E L
Sbjct: 446 ETIKQINQQTGAHCELDRRN----PGTETEKFFTIKGTPEQVEHAQRIFSEKL 494
>gi|410950239|ref|XP_004001515.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Felis catus]
Length = 667
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 63 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 119
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 120 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 175
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 176 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 225
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 119 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 178
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 179 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 231
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 232 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 286
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 287 EKIAHIMGPPDRCEHAARIINDLL-QSLR 314
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 247 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 303
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 304 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 363
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 364 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 415
>gi|348550680|ref|XP_003461159.1| PREDICTED: far upstream element-binding protein 2 [Cavia porcellus]
Length = 718
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 114 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 170
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 171 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 226
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 227 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 276
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 170 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 229
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 230 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 282
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 283 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 337
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 338 EKIAHIMGPPDRCEHAARIINDLL-QSLR 365
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 298 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 354
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 355 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGSWGPPGGEMTFSIPTHKCGLVIGRG 414
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 415 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 466
>gi|157115057|ref|XP_001652539.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|108877073|gb|EAT41298.1| AAEL007042-PC [Aedes aegypti]
Length = 715
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 11/171 (6%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P +KVG++IGK G+TI+ LQ SGAK+ I +D +P+ I G ++
Sbjct: 160 QEIMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQDGPG--QEMEKPLRISGDPQKVEH 217
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A++L+ +I E D + A+ A +G EQ E+ VP VG++IG+GG+ IK +
Sbjct: 218 AKQLVFDLIQEKD-----NYNAQRQQQAPMNG-TEQAEVFVPKSAVGVVIGKGGDMIKKI 271
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
Q SG ++Q I GDG +R V G Q+E + MI+E++ R
Sbjct: 272 QGDSGCKLQFIQ---GRGDGPGDRRCIVQGSRAQVEEGKRMIEELIESVQR 319
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 36/201 (17%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VGV+IGK GD I+ +Q +SG K+Q + P R + G+ + +++
Sbjct: 249 EVFVPKSAVGVVIGKGGDMIKKIQGDSGCKLQFIQGRGDGP--GDRRCIVQGSRAQVEEG 306
Query: 263 EKLINAVIAEADAGGSPSLVA------------------RGLATAQASG----------- 293
+++I +I RG +G
Sbjct: 307 KRMIEELIESVQRREQGGGGRGGRGGDRDDRGDRGDRPHRGGRDNHDNGNNGQYGNDFSG 366
Query: 294 ---AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVT 350
E+ VP K G+IIGRGG+TIK + +SGA ++ + + E+
Sbjct: 367 PQVTREEYTFTVPVNKCGIIIGRGGDTIKQINQQSGAHTEM--DRKASANQTNEKTFTTK 424
Query: 351 GDMRQIEIAQEMIKEVLSQTV 371
G+ QIE A+ +I++ ++ +
Sbjct: 425 GEPHQIEEAKRLIQDKINMEI 445
>gi|397523648|ref|XP_003831836.1| PREDICTED: far upstream element-binding protein 2-like [Pan
paniscus]
Length = 630
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 62 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 118
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 119 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 174
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 175 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 227
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 228 ----GGFGDRNEYGSRIGGG 243
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 118 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 177
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 178 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 230
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 231 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 285
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 286 EKIAHIMGPPDRCEHAARIINDLL-QSLR 313
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 246 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 302
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 303 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 362
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 363 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 414
>gi|149028151|gb|EDL83589.1| KH-type splicing regulatory protein, isoform CRA_b [Rattus
norvegicus]
Length = 721
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 200
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 201 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 256
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 257 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 309
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 310 ----GGFGDRNEYGSRVGGG 325
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 200 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 259
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 260 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 312
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 313 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 367
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 368 EKIAHIMGPPDRCEHAARIINDLL-QSLR 395
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 385 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 496
>gi|354479313|ref|XP_003501856.1| PREDICTED: far upstream element-binding protein 2-like [Cricetulus
griseus]
Length = 639
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 62 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 118
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 119 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 174
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 175 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 227
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 228 ----GGFGDRNEYGSRVGGG 243
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 118 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 177
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 178 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 230
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 231 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 285
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 286 EKIAHIMGPPDRCEHAARIINDLL-QSLR 313
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 246 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 302
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 303 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 362
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 363 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 414
>gi|395850961|ref|XP_003798040.1| PREDICTED: far upstream element-binding protein 2 [Otolemur
garnettii]
Length = 712
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 200
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 201 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 256
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 257 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 309
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 310 ----GGFGDRNEYGSRIGGG 325
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 200 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 259
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 260 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 312
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 313 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 367
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 368 EKIAHIMGPPDRCEHAARIINDLL-QSLR 395
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 385 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 496
>gi|359067148|ref|XP_003586314.1| PREDICTED: far upstream element-binding protein 2-like, partial
[Bos taurus]
Length = 679
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 90 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 146
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 147 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 202
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 203 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 255
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 256 ----GGFGDRNEYGSRIGGG 271
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 146 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 205
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 206 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 258
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 259 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 313
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 314 EKIAHIMGPPDRCEHAARIINDLL-QSLR 341
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 274 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 330
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 331 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 390
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 391 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 442
>gi|417412327|gb|JAA52553.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 689
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 85 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 141
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 142 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 197
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 198 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 247
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 141 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 200
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 201 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 253
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 254 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 308
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 309 EKIAHIMGPPDRCEHAARIINDLL-QSLR 336
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 269 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 325
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 326 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 385
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 386 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 437
>gi|119589502|gb|EAW69096.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_b [Homo sapiens]
Length = 747
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 199
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 200 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 255
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 256 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 199 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 258
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 259 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 311
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 312 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 366
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 367 EKIAHIMGPPDRCEHAARIINDLL-QSLR 394
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 383
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 495
>gi|358412988|ref|XP_003582441.1| PREDICTED: far upstream element-binding protein 2-like [Bos taurus]
Length = 841
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 197 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 253
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 254 SVQKAKMMLDDIVSRGR-GGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 309
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 310 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 359
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 253 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 312
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 313 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 365
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 366 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 420
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 421 EKIAHIMGPPDRCEHAARIINDLL-QSLR 448
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 381 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 437
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 438 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 497
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 498 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 549
>gi|350580630|ref|XP_003123158.3| PREDICTED: far upstream element-binding protein 2-like [Sus scrofa]
Length = 747
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 199
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 200 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 255
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 256 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 199 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 258
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 259 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 311
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 312 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 366
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 367 EKIAHIMGPPDRCEHAARIINDLL-QSLR 394
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 383
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 495
>gi|432101996|gb|ELK29816.1| Far upstream element-binding protein 2, partial [Myotis davidii]
Length = 664
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P Q +G + EI +P K GL+IG+GGET
Sbjct: 117 SVQKAKMMLDDIVSRG-RGGPPGQFHDNSNGGQ-NGTVQ--EIMIPAGKAGLVIGKGGET 172
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 173 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 225
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 226 ----GGFGDRNEYGSRIGGG 241
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D++ ++I +P K G++IGK G+TI+
Sbjct: 116 ESVQKAKMMLDDIVSRGRGGPPGQFHDNSNGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 175
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 176 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 228
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 229 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 283
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 284 EKIAHIMGPPDRCEHAARIINDLL-QSLR 311
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 244 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 300
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 301 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 360
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 361 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 412
>gi|359322253|ref|XP_542140.4| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Canis lupus familiaris]
Length = 840
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 272 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 328
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 329 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 384
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 385 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 434
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 328 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 387
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 388 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 440
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 441 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 495
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 496 EKIAHIMGPPDRCEHAARIINDLL-QSLR 523
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 456 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 512
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 513 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 572
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 573 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 624
>gi|268573738|ref|XP_002641846.1| Hypothetical protein CBG16520 [Caenorhabditis briggsae]
Length = 563
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA 241
QV++ ++SD PS +S ++ +P +K+G++IGK G+TIR +Q SG + T
Sbjct: 112 QVINRNQSDAPSGAVVGEISEEMMIPTDKIGLVIGKGGETIRTVQEQSGLR---TCTVVQ 168
Query: 242 DPHAAT---RPVEIIGTLSNIDKAEKLINAVIAEAD--------AGGSPSLVARGLAT-- 288
D +AT +P+ ++GT + ID A+ L++ ++ +G PS G
Sbjct: 169 DSTSATGQPKPLRMVGTQAAIDTAKALVHNIMNNTQGTTPMHQRSGNQPSGGQYGGYGGQ 228
Query: 289 -AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIV 347
QA G E+ VP G+IIG+GGE IK L +G +IQ P P S++R+
Sbjct: 229 DTQAKG-----EVIVPRLSAGMIIGKGGEMIKRLAMETGTKIQFKPDVNPN---SEDRVA 280
Query: 348 RVTGDMRQIEIAQEMIKEVLSQTVR 372
+ G QI A E I E++++ ++
Sbjct: 281 VIMGTRDQIYQATERITEIVNRAMK 305
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +V D D TD VP VG++IGK G IR +Q SG ++Q+ D
Sbjct: 32 PSEVADLKMGDSGKVTD------IYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQM--DP 83
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE 299
D R I G + A ++I VI + +PS G + S E
Sbjct: 84 DHASMNGIRNCTIEGLPDQVAIARQMITQVINR-NQSDAPS----GAVVGEISE-----E 133
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
+ +P +K+GL+IG+GGETI+ +Q +SG R + Q G + + +R+ G I+ A
Sbjct: 134 MMIPTDKIGLVIGKGGETIRTVQEQSGLRTCTVVQDSTSATG-QPKPLRMVGTQAAIDTA 192
Query: 360 QEMIKEVLSQT 370
+ ++ +++ T
Sbjct: 193 KALVHNIMNNT 203
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 169/413 (40%), Gaps = 79/413 (19%)
Query: 7 LAPASAAAADLKR--KLDDLEPDEA-----LEHAEGMRDDEAKNSDEV---EKNVDGFAE 56
+ A LKR +LD L+ D E A+ D K +D EK V
Sbjct: 3 IVGADGGVGILKRPLELDFLDGDLIPAKKPSEVADLKMGDSGKVTDIYPVPEKVVGLVIG 62
Query: 57 AHGSEVK--------RPRLDDDKTEKPDGPVNVNGLK----EEKPDEVVDAEQLTEDTTK 104
GSE++ R ++D D ++NG++ E PD+V A Q+
Sbjct: 63 KGGSEIRLIQQTSGCRVQMDPDHA-------SMNGIRNCTIEGLPDQVAIARQMITQVIN 115
Query: 105 EEELE--SAEVKTEQHSSVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEET--KEVT 160
+ + S V E + E+ + +I + V+ E V+E++ + T
Sbjct: 116 RNQSDAPSGAVVGE----ISEEMMIPTDKIGL------VIGKGGETIRTVQEQSGLRTCT 165
Query: 161 VKEEET-----------VKEEESVEPSNVVPQQVVDNSKSDDP----------------S 193
V ++ T V + +++ + + +++N++ P
Sbjct: 166 VVQDSTSATGQPKPLRMVGTQAAIDTAKALVHNIMNNTQGTTPMHQRSGNQPSGGQYGGY 225
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
D+ ++ VP G++IGK G+ I+ L +G KIQ D +P++ R I+
Sbjct: 226 GGQDTQAKGEVIVPRLSAGMIIGKGGEMIKRLAMETGTKIQF--KPDVNPNSEDRVAVIM 283
Query: 254 GTLSNIDKAEKLINAVIAEA-DAGGSPSLVARGLATAQASGAAEQVE-IKVPNEKVGLII 311
GT I +A + I ++ A G+P G + + + V + VP+ K GL+I
Sbjct: 284 GTRDQIYQATERITEIVNRAMKNNGAP---GSGTGSVASVMPGQTVFYLHVPSGKCGLVI 340
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
G+GGE IK ++ +GA L P E +E++ + G Q+ A ++K
Sbjct: 341 GKGGENIKQIERETGATCGLAPA--AEQKNEEEKVFEIKGTPFQVHHASHLVK 391
>gi|403296273|ref|XP_003939037.1| PREDICTED: far upstream element-binding protein 2, partial [Saimiri
boliviensis boliviensis]
Length = 644
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 76 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 132
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 133 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 188
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 189 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 238
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 132 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 191
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 192 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 244
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 245 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 299
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 300 EKIAHIMGPPDRCEHAARIINDLL-QSLR 327
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 260 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 316
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 317 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 376
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 377 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 428
>gi|40225729|gb|AAH10083.1| FUBP1 protein [Homo sapiens]
Length = 304
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 156 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 207
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 208 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 255
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 155 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 209
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 210 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 266
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
G E +++ +P VG++IGR GE I
Sbjct: 267 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMI 298
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQS 159
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 160 AKRLLDQIVEK 170
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ ++ + +VP+ VG +IG+ G+ I +Q SG KIQI ++ P RP + GT
Sbjct: 63 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPE---RPCVLTGTPE 119
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+I++A++L+ ++ G G T Q EI +P KVGL+IG+GGET
Sbjct: 120 SIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQ--------EILIPASKVGLVIGKGGET 171
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 172 IKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 221
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 14/174 (8%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 242 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPE---RAAQVMGPPDRCQ 298
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQ------ASGAAEQVEIKVPNEKVGLII 311
A +IN +I E D G + VARG ++ +G +++ VP +K GL+I
Sbjct: 299 HAAHIINELILTAQERDGFGGLA-VARGRGRSRGDWNMGTAGGVQEITYTVPADKCGLVI 357
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
G+GGE IK + +SGA ++L P D S RI + G +QIE+A+ +I E
Sbjct: 358 GKGGENIKSINQQSGAHVELQRNPPPNTDPSL-RIFTIRGVPQQIEVARHLIDE 410
>gi|2055427|gb|AAB53222.1| KSRP [Homo sapiens]
Length = 711
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 199
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 200 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 255
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 256 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 308
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 309 ----GGFGDRNEYGSRIGGG 324
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 199 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 258
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 259 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 311
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 312 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 366
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 367 EKIAHIMGPPDRCEHAARIINDLL-QSLR 394
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 383
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 495
>gi|149028150|gb|EDL83588.1| KH-type splicing regulatory protein, isoform CRA_a [Rattus
norvegicus]
Length = 729
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 200
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 201 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 256
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 257 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 309
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 310 ----GGFGDRNEYGSRVGGG 325
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 200 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 259
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 260 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 312
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 313 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 367
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 368 EKIAHIMGPPDRCEHAARIINDLL-QSLR 395
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 384
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 385 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E + VR
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKIE--VRSQ 501
Query: 375 TL 376
L
Sbjct: 502 VL 503
>gi|154355000|ref|NP_003676.2| far upstream element-binding protein 2 [Homo sapiens]
gi|332852032|ref|XP_512315.3| PREDICTED: far upstream element-binding protein 2 [Pan troglodytes]
gi|402903923|ref|XP_003914804.1| PREDICTED: far upstream element-binding protein 2 [Papio anubis]
gi|313104306|sp|Q92945.4|FUBP2_HUMAN RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=p75
gi|119589503|gb|EAW69097.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_c [Homo sapiens]
Length = 711
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 199
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 200 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 255
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 256 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 308
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 309 ----GGFGDRNEYGSRIGGG 324
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 199 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 258
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 259 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 311
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 312 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 366
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 367 EKIAHIMGPPDRCEHAARIINDLL-QSLR 394
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 383
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 495
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 29/193 (15%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ ++ VP VG +IG+ G+TI LQ SG++IQ+ +D P RP + G
Sbjct: 94 SIVTVEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQDL-GQP---MRPCTLTGVPD 149
Query: 258 NIDKAEKLINAVIAE---------------ADAGGSPSLVARGLATA-QASGA-----AE 296
++ +A+ LI ++ E A + SL+A TA GA AE
Sbjct: 150 SVQRAKVLIEEIVREHMQPFGPGAGGPGGNASGPTTASLMASAYGTAPDGDGADPNANAE 209
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
+ VP E+ G +IGRGGETI +QTRSGAR++++ Q P + ER++ + GD I
Sbjct: 210 TETMMVPAERAGFLIGRGGETINMIQTRSGARLKMV-QEDPH---AAERLLYMMGDAEAI 265
Query: 357 EIAQEMIKEVLSQ 369
+ A+E++ ++L++
Sbjct: 266 KRARELVADLLAE 278
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 15/175 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + G LIG+ G+TI +Q SGA++++ ++ DPHAA R + ++G I +A
Sbjct: 213 MMVPAERAGFLIGRGGETINMIQTRSGARLKMVQE---DPHAAERLLYMMGDAEAIKRAR 269
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ ++AE + +P + + +++I+VP G +IGRGGETI+ ++
Sbjct: 270 ELVADLLAEKPS--APQEAPPMPTSYDENNRHLRLKIEVPGVAAGRVIGRGGETIRRIEA 327
Query: 324 RSGARIQLIPQHLPEGDG-----SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
+G RIQ + DG + RI +TG+ IE A++ I ++ RP
Sbjct: 328 DTGCRIQ-----FDQADGVGLGPNDARIATLTGNQDAIEAAEQAIVGIIRDAERP 377
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 22/185 (11%)
Query: 192 PSSTDDST--MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA---DPHAA 246
P+S D++ + KIEVP G +IG+ G+TIR ++ ++G +IQ + AD P+ A
Sbjct: 290 PTSYDENNRHLRLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQ-ADGVGLGPNDA 348
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADA--GGSPSLVARGLATAQASGAAEQVEIKVPN 304
R + G I+ AE+ I +I +A+ G PS A T I +P
Sbjct: 349 -RIATLTGNQDAIEAAEQAIVGIIRDAERPDAGPPSRRADSRPTDT---------IAIPA 398
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
E+ G IIG+GGETI+ +Q ++G ++L + E+I + G+ QIE + +I+
Sbjct: 399 ERAGFIIGKGGETIRSIQDQTGVHLELDRN----SEAGNEKIFIIRGNPDQIEHCKMVIR 454
Query: 365 EVLSQ 369
++L++
Sbjct: 455 DMLAR 459
>gi|380800867|gb|AFE72309.1| far upstream element-binding protein 2, partial [Macaca mulatta]
Length = 660
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 92 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 148
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 149 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 204
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 205 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 257
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y R+ G
Sbjct: 258 ----GGFGDRNEYGSRIGGG 273
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 148 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 207
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 208 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 260
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 261 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 315
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 316 EKIAHIMGPPDRCEHAARIINDLL-QSLR 343
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 276 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 332
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 333 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 392
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 393 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 444
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 13/169 (7%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+ S + +VP+ VG +IG+ G+ I LQ SG KIQI D+ P R V + G +
Sbjct: 87 STSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPD---RSVTLTGLPES 143
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I A++L+ ++ + G P A G Q EI VP K GL+IG+GGETI
Sbjct: 144 IQTAKRLLTEIVEK----GRP---APAFHHNDGPGMTVQ-EIMVPASKAGLVIGKGGETI 195
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
K LQ R+G ++ +I Q P+ G+ ++ +R++G+ +++ A+EM+ E++
Sbjct: 196 KSLQERAGVKMVMI-QDGPQNTGA-DKPLRISGEPFKVQQAKEMVMELI 242
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 26/205 (12%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ES++ + + ++V+ + +D P T ++I VP +K G++IGK G+TI+
Sbjct: 142 ESIQTAKRLLTEIVEKGRPAPAFHHNDGPGMT-----VQEIMVPASKAGLVIGKGGETIK 196
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D G
Sbjct: 197 SLQERAGVKMVMIQDGPQN-TGADKPLRISGEPFKVQQAKEMVMELIR--DQGFREQ--- 250
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
RG ++ G + +++ VP VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 251 RGEYGSRIGG--DSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPD-----DGTT 303
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++ G Q + A E+I ++L
Sbjct: 304 PDRIAQIMGPPDQAQHAAEIISDLL 328
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 11/174 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q ++G +IQ D P R +I+G
Sbjct: 262 SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPD---RIAQIMGPPDQAQ 318
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQAS-------GAAEQVEIKVPNEKVGLIIGR 313
A ++I+ ++ AGG P G ++ VP K GLIIG+
Sbjct: 319 HAAEIISDLLRSVQAGGPPGHGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGK 378
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GGETIKG+ +SGARI+L P D ++ V G +QI+ A+++++E +
Sbjct: 379 GGETIKGISQQSGARIELQRNPPPNAD-PNIKMFTVRGSPQQIDYARQLVEEKI 431
>gi|426386866|ref|XP_004059901.1| PREDICTED: far upstream element-binding protein 2 [Gorilla gorilla
gorilla]
Length = 813
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 245 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 301
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 302 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 357
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 358 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 407
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 301 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 360
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 361 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 413
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 414 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 468
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 469 EKIAHIMGPPDRCEHAARIINDLL-QSLR 496
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 429 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 485
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 486 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 545
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 546 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 597
>gi|390478449|ref|XP_003735512.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Callithrix jacchus]
Length = 657
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 89 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 145
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 146 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 201
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 202 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 251
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 145 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 204
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 205 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 257
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 258 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 312
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 313 EKIAHIMGPPDRCEHAARIINDLL-QSLR 340
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 273 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 329
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 330 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 389
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 390 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 441
>gi|270010095|gb|EFA06543.1| hypothetical protein TcasGA2_TC009450 [Tribolium castaneum]
Length = 756
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 102/179 (56%), Gaps = 17/179 (9%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ I+VP+ VG++IG+ G+ I LQ SG KIQ+ D+ P R + GT I
Sbjct: 120 LNEDIKVPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMPD---RVCSLSGTKEAI 176
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ---------VEIKVPNEKVGLI 310
++A++LI ++ + G + L + G VEI +P KVGLI
Sbjct: 177 NRAKELIMNIVHQR--GRTEGLGMNNMNQGMGGGGGGGGGGGGGRNFVEIMIPGPKVGLI 234
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IG+GGETIK LQ +SGA++ +I Q P + +E+ +R++GD ++E A++++ +++++
Sbjct: 235 IGKGGETIKQLQEKSGAKMVVI-QDGPNQE--QEKPLRISGDPSKVEYAKQLVYDLIAE 290
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 97/176 (55%), Gaps = 11/176 (6%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + +D +P+ I G S ++ A
Sbjct: 223 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQ--EKPLRISGDPSKVEYA 280
Query: 263 EKLINAVIAEADA------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++L+ +IAE + GG R G + E+ VP + VG++IG+GG+
Sbjct: 281 KQLVYDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGGGNEAEVLVPRQAVGVVIGKGGD 340
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
IK +Q +GAR+Q Q EG G ER ++G +Q+E A++ I+E++ R
Sbjct: 341 MIKKIQAETGARVQF-QQAREEGPG--ERRCYLSGTPKQVEQARQRIEELIDSVHR 393
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VGV+IGK GD I+ +Q +GA++Q + + P R + GT +++A
Sbjct: 323 EVLVPRQAVGVVIGKGGDMIKKIQAETGARVQFQQAREEGP--GERRCYLSGTPKQVEQA 380
Query: 263 EKLINAVIAEADAGGSPSLVAR---------------------------GLATAQASGAA 295
+ I +I + G + A
Sbjct: 381 RQRIEELIDSVHRRDGGDGPGQGRGRGRGGDRYDSRGGSNRNGGGQDYGGWDDRRQQQAP 440
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++V VP+ K G+IIGRGGETIK + +SGA +L + S E+ + GD Q
Sbjct: 441 QEVTFVVPSSKCGVIIGRGGETIKQINQQSGAHCEL-DRRSQNNQNSNEKTFIIRGDPDQ 499
Query: 356 IEIAQEMIKE 365
IE A+ +I +
Sbjct: 500 IEAAKRIISD 509
>gi|47223565|emb|CAF99174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 561
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 96/165 (58%), Gaps = 15/165 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+VP+ VG +IGK G+ I +Q SG KIQI D+ RP + G+ NI++A+
Sbjct: 86 FKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASDSGG---MLDRPCTLTGSPENIEQAK 142
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+N ++ + G P +G+ +Q I +P KVGL+IG+ GETIK LQ
Sbjct: 143 RLLNEIVEQCRYG--PGF----HCDMDGNGSIQQ--ILIPANKVGLVIGKKGETIKQLQE 194
Query: 324 RSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
R+G ++ +I LP G ++ +R+TGD ++++ A+E++ +++
Sbjct: 195 RTGVQMIMIQDDPLPTG---ADKPLRITGDPQKVQQARELVVKLI 236
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 171 ESVEPSNVVPQQVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
E++E + + ++V+ + D + ++I +P NKVG++IGK G+TI+ LQ
Sbjct: 136 ENIEQAKRLLNEIVEQCRYGPGFHCDMDGNGSIQQILIPANKVGLVIGKKGETIKQLQER 195
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
+G ++ + +D D P A +P+ I G + +A +L+ +I + D G V R
Sbjct: 196 TGVQMIMIQD-DPLPTGADKPLRITGDPQKVQQARELVVKLIRDKDQG--DFRVGRADFG 252
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIV 347
++ G+ +++ VP VG+IIGR GE I+ +Q +G RIQ + DG S +R+
Sbjct: 253 SKMGGST--LDVVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQ-----FKQDDGISPDRVA 305
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+V G A +I E++
Sbjct: 306 QVMGQPDHCHHAVHIINELV 325
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 188 KSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
++D S ST+ + VP VG++IG+ G+ IR +Q ++G +IQ +D P
Sbjct: 248 RADFGSKMGGSTLD--VVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISPD--- 302
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQAS----GAAEQVEIKVP 303
R +++G + A +IN ++ A V + G ++V VP
Sbjct: 303 RVAQVMGQPDHCHHAVHIINELVQTAQERDGFGGVMGRRGRGDCNMGGPGGLQEVTYAVP 362
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+K GL+IG+GGETIK ++ +S A ++L P D RI + G +Q+E A+++I
Sbjct: 363 ADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTD-PNIRIFSIRGTPQQLEKARQLI 421
Query: 364 KEVLSQTVRPSTLSGGFN--QQAYRPRVPTGPPQWGP 398
E + V + + G N Q P PPQ GP
Sbjct: 422 DERIGGPVMGGSSNFGMNPYNQG-----PATPPQHGP 453
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+ KVP++ VG IIG+GGE I +Q SG +IQ+ + G +R +TG IE
Sbjct: 85 DFKVPDKMVGFIIGKGGEQISRIQLESGCKIQI----ASDSGGMLDRPCTLTGSPENIEQ 140
Query: 359 AQEMIKEVLSQT 370
A+ ++ E++ Q
Sbjct: 141 AKRLLNEIVEQC 152
>gi|355703041|gb|EHH29532.1| hypothetical protein EGK_09989, partial [Macaca mulatta]
Length = 625
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 117 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 172
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 173 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 222
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 116 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 175
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 176 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 228
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 229 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 283
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 284 EKIAHIMGPPDRCEHAARIINDLL-QSLR 311
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 244 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 300
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 301 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 360
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 361 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 412
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 121/233 (51%), Gaps = 24/233 (10%)
Query: 145 TEEAFIDVKEETKEVTVK----EEETVKEEESVEPS---NVVPQQVVDNSKSDDPSST-- 195
T++ F D+ ++V K + + ++PS V + +DN + +
Sbjct: 19 TKDDFADMIRRVRQVAAKMGGDQMPNMNSSAVIDPSLYGFVSQNRSLDNGVGNHLGAMVH 78
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+ + +VP+ VG +IGK G+ I +Q SG KIQI D+ RP + G+
Sbjct: 79 QRALTTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGG---MLDRPCTLTGS 135
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
NI++A++L++ +I + G P +G+ +Q+ I P KVGL+IG+GG
Sbjct: 136 PENIEQAKRLLSEIIEQCRYG--PGF----HNDMDGNGSIQQMLI--PANKVGLVIGKGG 187
Query: 316 ETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK LQ R+G ++ +I +P G ++ +R+TGD +++ A+E++ +++
Sbjct: 188 ETIKQLQERTGVQMMMIQDDPMPTG---ADKPLRITGDPLKVQQARELVVKLI 237
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q ++G +IQ +D P R +++G +
Sbjct: 260 SLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPD---RVAQVMGQPEHCH 316
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
A LIN ++ E D G R +G ++V VP +K GL+IG+GGET
Sbjct: 317 HAVHLINELVQTAQERDGYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIGKGGET 376
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLS 377
IK ++ +S A ++L P D RI + G +Q+E A+++I E + V +
Sbjct: 377 IKNIKEQSRAHVELQRNPPPSTD-PNVRIFSIRGTPQQLEKARQLIDERIG--VGGIGGN 433
Query: 378 GGFNQQAYRPRVPTGPPQWGPR 399
F+ Y + PT PPQ GP+
Sbjct: 434 SNFSMNLYN-QGPTTPPQHGPQ 454
>gi|256078989|ref|XP_002575774.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043995|emb|CCD81541.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 530
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S SR + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 87 PTSNNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 141
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ A ++G+ +E+ VP K
Sbjct: 142 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTTPAY-----NSTGSITTIEMMVPGLKA 196
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 197 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPARVEKARQAVL 251
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 252 VLINSRDRP 260
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G +
Sbjct: 183 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPA 241
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 242 RVEKARQAVLVLINSRDRPGGSMHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 292
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ-TVRPST 375
+IK + SGA +++ + P+ +I V G+ ++IE A MI E RP+T
Sbjct: 293 SIKEICRVSGAHVEISKEPPPD---PSIKIFNVRGNRQEIEQAIRMISERAGIPMTRPAT 349
Query: 376 LSGGF 380
+G
Sbjct: 350 TTGAV 354
>gi|148706277|gb|EDL38224.1| mCG140911, isoform CRA_a [Mus musculus]
Length = 765
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 23/200 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 180 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 236
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 237 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 292
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 293 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 345
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 346 ----GGFGDRNEYGSRVGGG 361
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 236 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 295
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 296 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 348
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 349 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 403
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 404 EKIAHIMGPPDRCEHAARIINDLL-QSLR 431
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 364 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 420
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 421 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 480
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E + VR
Sbjct: 481 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKIE--VRSW 537
Query: 375 TL 376
L
Sbjct: 538 VL 539
>gi|328708265|ref|XP_001949890.2| PREDICTED: far upstream element-binding protein 1-like
[Acyrthosiphon pisum]
Length = 767
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 101/180 (56%), Gaps = 13/180 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ +SGAK+ + +D + +P+ I G + ++ A
Sbjct: 207 QIMIPGAKVGLIIGKGGETIKMLQESSGAKMIVIQDG-PNSQENEKPLRISGETAKVEHA 265
Query: 263 EKLINAVIAEADAGGSPSLVARGLAT--------AQASGAAEQVEIKVPNEKVGLIIGRG 314
+KL+ ++ D GS + G + SG +VE+ VP + VGL+IG+G
Sbjct: 266 KKLVYDMLG-GDKDGSSNFDQNGSNWNGSNSGDYSMHSGYGGKVEVGVPKQVVGLVIGKG 324
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
G+ IK +Q +GA++Q I +L E D +R +TG+ Q+ A++ I+ ++ + S
Sbjct: 325 GDMIKKIQADTGAKVQFI--NLNE-DTPDDRRCLITGNPDQVAEAKQRIESLVDSALNRS 381
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S + ++ +I+VP+ VG + + G I LQ +G KIQ+ D+ P R
Sbjct: 102 PGSQFGNVINEEIKVPDKMVG--LSRGGGQISRLQAETGCKIQMAPDS---PGLLERSCT 156
Query: 252 IIGTLSNIDKAEKLINAVI---AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVG 308
+ G +I A++LI ++ + G + +++ + A Q +I +P KVG
Sbjct: 157 LTGNAQSITLAKELIQNIVQNKVSVEGTGGAKIEGLNISSPPSQPAFTQAQIMIPGAKVG 216
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
LIIG+GGETIK LQ SGA++ ++ Q P E+ +R++G+ ++E A++++ ++L
Sbjct: 217 LIIGKGGETIKMLQESSGAKM-IVIQDGPNSQ-ENEKPLRISGETAKVEHAKKLVYDML 273
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK GD I+ +Q ++GAK+Q + P R I G + +A
Sbjct: 309 EVGVPKQVVGLVIGKGGDMIKKIQADTGAKVQFINLNEDTPD--DRRCLITGNPDQVAEA 366
Query: 263 EKLINAVIAEA--DAGGSPSLVAR----GLATAQASGAAEQVE------IKVPNEKVGLI 310
++ I +++ A +G S Q+ G + Q + VP+ K G+I
Sbjct: 367 KQRIESLVDSALNRSGNRQSGGGGGGGGNFNRNQSWGNSGQTQPLNETTFTVPSAKCGVI 426
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IG+GGETIK + ++GA ++ +H G E+ + G QIE A+ MI E L
Sbjct: 427 IGKGGETIKQINMQTGAHCEIDRRHNNTGS---EKTFVIRGTTEQIENAKRMINEKL 480
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
EIKVP++ VGL RGG I LQ +G +IQ+ P+ G ER +TG+ + I +
Sbjct: 113 EIKVPDKMVGL--SRGGGQISRLQAETGCKIQM----APDSPGLLERSCTLTGNAQSITL 166
Query: 359 AQEMIKEVLSQTV 371
A+E+I+ ++ V
Sbjct: 167 AKELIQNIVQNKV 179
>gi|149026247|gb|EDL82490.1| far upstream element (FUSE) binding protein 1, isoform CRA_b
[Rattus norvegicus]
gi|149026248|gb|EDL82491.1| far upstream element (FUSE) binding protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 395
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 94 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 150
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 151 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 202
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 203 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 250
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 150 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 204
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 205 QLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 261
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 262 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 313
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 314 PDRIAQITGPPDRCQHAAEIITDLL 338
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A ++
Sbjct: 277 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAAEI 333
Query: 266 INAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGGE 316
I ++ AG G + G ++ VP K GLIIG+G E
Sbjct: 334 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGNE 392
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 13/169 (7%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R V + G +I
Sbjct: 100 SEEFKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPE---RSVTLTGPQDSIQ 156
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
A++L++ ++ + G P A G Q EI VP K GL+IG+GGETIK
Sbjct: 157 AAKRLLSEIVEK----GRP---APAFHHNDGPGMTVQ-EIMVPASKAGLVIGKGGETIKS 208
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ +I Q P+ G+ ++ +R++G+ +++ A+EM+ E++ +
Sbjct: 209 LQERAGVKMVMI-QDGPQNTGA-DKPLRISGEPFKVQQAKEMVMELIRE 255
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 108/206 (52%), Gaps = 26/206 (12%)
Query: 170 EESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTI 222
++S++ + + ++V+ + +D P T ++I VP +K G++IGK G+TI
Sbjct: 152 QDSIQAAKRLLSEIVEKGRPAPAFHHNDGPGMT-----VQEIMVPASKAGLVIGKGGETI 206
Query: 223 RYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLV 282
+ LQ +G K+ + +D + A +P+ I G + +A++++ +I E
Sbjct: 207 KSLQERAGVKMVMIQDGPQN-TGADKPLRISGEPFKVQQAKEMVMELIREQGF-----RE 260
Query: 283 ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS 342
RG ++ G E +++ VP VG++IGR GE IK +Q +G RIQ P DGS
Sbjct: 261 QRGEYGSRIGG--ESLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPD-----DGS 313
Query: 343 K-ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++ G Q + A ++I ++L
Sbjct: 314 APDRIAQIMGPPDQAQHAADIIADLL 339
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q ++G +IQ D D A R +I+G
Sbjct: 273 SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPD---DGSAPDRIAQIMGPPDQAQ 329
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQAS-------GAAEQVEIKVPNEKVGLIIGR 313
A +I ++ +GG P G ++ VP K GLIIG+
Sbjct: 330 HAADIIADLLRSVQSGGPPGHGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGK 389
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GGETIKG+ +SGARI+L P D ++ V G +QI+ A+++++E +
Sbjct: 390 GGETIKGISQQSGARIELQRNPPPNSD-PNIKMFTVRGSPQQIDYARQLVEEKI 442
>gi|355755365|gb|EHH59112.1| hypothetical protein EGM_09154, partial [Macaca fascicularis]
Length = 629
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 117 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 172
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 173 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 222
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 116 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 175
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 176 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 228
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 229 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 283
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 284 EKIAHIMGPPDRCEHAARIINDLL-QSLR 311
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 244 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 300
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 301 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 360
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 361 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 412
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 13/169 (7%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++S + +VP+ VG +IG+ G+ I LQ SG KIQI D+ P R V + G +
Sbjct: 91 SVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPD---RSVTLTGLPES 147
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
I A++L+ ++ + G P A G Q EI +P K GL+IG+GGETI
Sbjct: 148 IQTAKRLLTEIVEK----GRP---APAFNPNDGPGMTVQ-EIMIPASKAGLVIGKGGETI 199
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
K LQ R+G ++ +I Q P+ G+ ++ +R++G+ +++ A+EM+ +++
Sbjct: 200 KSLQERAGVKMVMI-QDGPQNTGA-DKPLRISGEPFKVQQAKEMVMDLI 246
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 26/205 (12%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ES++ + + ++V+ + +D P T ++I +P +K G++IGK G+TI+
Sbjct: 146 ESIQTAKRLLTEIVEKGRPAPAFNPNDGPGMT-----VQEIMIPASKAGLVIGKGGETIK 200
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D G
Sbjct: 201 SLQERAGVKMVMIQDGPQN-TGADKPLRISGEPFKVQQAKEMVMDLIR--DQGFREQ--- 254
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
RG ++ G + +++ VP VG++IGR GE IK +Q +G RIQ P DGS
Sbjct: 255 RGEYGSRVGG--DSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPD-----DGST 307
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++ G Q + A ++I ++L
Sbjct: 308 PDRIAQIMGPPNQAQHAADIITDLL 332
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q ++G +IQ D + P R +I+G +
Sbjct: 266 SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSTPD---RIAQIMGPPNQAQ 322
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQAS-----GAAEQVEIKVPNEKVGLIIGRGG 315
A +I ++ AGG P G ++ VP K GLIIG+GG
Sbjct: 323 HAADIITDLLRSVQAGGPPGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTVKTGLIIGKGG 382
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
ETIKG+ +SGARI+L P D S ++ V G +QI+ A+++++E +
Sbjct: 383 ETIKGISQQSGARIELQRNPPPNSDPSI-KMFTVRGSPQQIDYARQLVEEKI 433
>gi|327350457|gb|EGE79314.1| KH domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 575
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 13/187 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S D++ + I V ++ VG++IG+ G+++R ++ +G +IQ +ADP + RP +
Sbjct: 195 PGSMDENIET--ISVESSLVGLIIGRQGESLRRIESETGTRIQFL--DNADPSSTVRPCK 250
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR------GLATAQASGAAEQVEIKVPNE 305
I G+ + A+ I +I+E+ A S + R A+ + + V I VP+
Sbjct: 251 ITGSRAARGDAKAEITRIISESSASRSGARADRPGHMPPKAASQPSQDDEDAVRIMVPDR 310
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G E A+ MI E
Sbjct: 311 TVGLIIGRGGETIRDLQERSGCHVNIVNEN---KSINGLRPVNLIGSPEATERAKNMILE 367
Query: 366 VLSQTVR 372
++ R
Sbjct: 368 IVESDTR 374
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS D+ + +I VP+ VG++IG+ G+TIR LQ SG + I + + RPV
Sbjct: 295 PSQDDEDAV--RIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKS--INGLRPVN 350
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR------GLATAQASGAAEQVE--IKVP 303
+IG+ ++A+ +I ++ E+D + R G + E++ + +P
Sbjct: 351 LIGSPEATERAKNMILEIV-ESDTRQLANPTQRETRPPFGGDPSGGGPGGEKINDMMFIP 409
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ VG+IIG+GG+TIK +Q SG RI + P G + +R V + G IE A+ MI
Sbjct: 410 PDAVGMIIGKGGDTIKEMQAISGCRINI---QSPVGRDA-DREVTLVGSRGAIEEAKRMI 465
Query: 364 KEVL 367
E +
Sbjct: 466 MEKI 469
>gi|148679985|gb|EDL11932.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Mus
musculus]
Length = 426
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 126 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 182
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 183 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 234
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 235 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 282
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 182 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 236
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 237 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 293
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 294 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 345
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 346 PDRIAQITGPPDRCQHAAEIITDLL 370
>gi|261199862|ref|XP_002626332.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239594540|gb|EEQ77121.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239607932|gb|EEQ84919.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 576
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 13/187 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S D++ + I V ++ VG++IG+ G+++R ++ +G +IQ +ADP + RP +
Sbjct: 196 PGSMDENIET--ISVESSLVGLIIGRQGESLRRIESETGTRIQFL--DNADPSSTVRPCK 251
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR------GLATAQASGAAEQVEIKVPNE 305
I G+ + A+ I +I+E+ A S + R A+ + + V I VP+
Sbjct: 252 ITGSRAARGDAKAEITRIISESSASRSGARADRPGHMPPKAASQPSQDDEDAVRIMVPDR 311
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G E A+ MI E
Sbjct: 312 TVGLIIGRGGETIRDLQERSGCHVNIVNEN---KSINGLRPVNLIGSPEATERAKNMILE 368
Query: 366 VLSQTVR 372
++ R
Sbjct: 369 IVESDTR 375
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS D+ + +I VP+ VG++IG+ G+TIR LQ SG + I + + RPV
Sbjct: 296 PSQDDEDAV--RIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKS--INGLRPVN 351
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR------GLATAQASGAAEQVE--IKVP 303
+IG+ ++A+ +I ++ E+D + R G + E++ + +P
Sbjct: 352 LIGSPEATERAKNMILEIV-ESDTRQLANPTQRETRPPFGGDPSGGGPGGEKINDMMFIP 410
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ VG+IIG+GG+TIK +Q SG RI + P G + +R V + G IE A+ MI
Sbjct: 411 PDAVGMIIGKGGDTIKEMQAISGCRINI---QSPVGRDA-DREVTLVGSRGAIEEAKRMI 466
Query: 364 KEVL 367
E +
Sbjct: 467 MEKI 470
>gi|324511113|gb|ADY44637.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 581
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + IEVP++ VG++IG+ G+ I +Q S ++Q++ ++D + R
Sbjct: 26 PSGGAGDVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGN---NMRQCT 82
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ GT +++A+ +I VIA A P+ RG SG Q+ E+ +P K GL
Sbjct: 83 LQGTKMAVERAKSMIQDVIARAGNRPPPN---RGHFDGGMSGGGRQITHEMLIPGAKCGL 139
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I + + G + + +R+ G+ +++ A+ M++++L
Sbjct: 140 VIGKGGETIKNIQEQAGVKMVMIQE--TQESGGQPKPLRIIGEPDKVDTARRMVEDIL 195
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 286
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ AG AE + VP K GL+IG+GGETIK +
Sbjct: 287 TQFISELVNKSGAGS----------------GAEIFYMHVPANKTGLVIGKGGETIKQIC 330
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L + P S E++ + G QI AQ +I+
Sbjct: 331 AESGAHVELSREPPPN---SYEKVFIIKGTPYQIHHAQHIIR 369
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Query: 190 DDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK---IQITRDADADPHAA 246
D S ++ ++ +P K G++IGK G+TI+ +Q +G K IQ T+++ P
Sbjct: 116 DGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP--- 172
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEAD-----AGGSPSLVARGLATAQASGAAEQVEIK 301
+P+ IIG +D A +++ ++ + G G G E+
Sbjct: 173 -KPLRIIGEPDKVDTARRMVEDILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVI 231
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP VG+IIG+GGETIK L SGA+IQ P E + +R + G QI A +
Sbjct: 232 VPRASVGMIIGKGGETIKRLAAESGAKIQFKPD---EDQTTPDRCAVIQGTTEQIAKATQ 288
Query: 362 MIKEVLSQT 370
I E+++++
Sbjct: 289 FISELVNKS 297
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGL+IGRGGE I +Q++S R+Q+ PE DG+ R + G +E A
Sbjct: 38 IEVPDHCVGLVIGRGGEQISQIQSQSNCRVQM----SPESDGNNMRQCTLQGTKMAVERA 93
Query: 360 QEMIKEVLSQT-VRP--------STLSGGFNQQAYRPRVP 390
+ MI++V+++ RP +SGG Q + +P
Sbjct: 94 KSMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHEMLIP 133
>gi|393911661|gb|EJD76409.1| KH domain-containing protein, variant [Loa loa]
Length = 582
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 101/178 (56%), Gaps = 8/178 (4%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P + + +EVP++ VG++IG+ G+ I +Q + ++Q++ ++D + R
Sbjct: 25 PVGSVGEVVMETMEVPDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGN---NMRQCT 81
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ G+ ++D+A +IN VIA A P+ G Q+ E+ +P K GL
Sbjct: 82 LQGSKMSVDRARAMINEVIARAGNRPPPNRTGH-FDGGIPVGTGRQITQEMFIPGAKCGL 140
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I ++ + G + + +R+TGD ++E A+ M++E+L
Sbjct: 141 VIGKGGETIKNIQEQTGVKMVMIQEN--QESGGQPKPLRITGDPEKVENARRMVEEIL 196
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA
Sbjct: 224 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQ--ERCAVIQGTAEQIAKA 281
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ A +G AE + VP+ K GL+IG+GGETIK +
Sbjct: 282 TQFISELVKKSGA----------------AGGAEMFYMHVPSNKTGLVIGKGGETIKQIC 325
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L P + E++ + G QI AQ +I+
Sbjct: 326 AESGAHVELSRDPPPN---ASEKVFIIKGTPYQIHHAQHIIR 364
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
++VP+ VGL+IGRGGE I +Q+++ R+Q+ PE DG+ R + G ++ A
Sbjct: 37 MEVPDHCVGLVIGRGGEQISQIQSQTNCRVQM----SPESDGNNMRQCTLQGSKMSVDRA 92
Query: 360 QEMIKEVLSQ 369
+ MI EV+++
Sbjct: 93 RAMINEVIAR 102
>gi|324500869|gb|ADY40396.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 581
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + IEVP++ VG++IG+ G+ I +Q S ++Q++ ++D + R
Sbjct: 26 PSGGAGDVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGN---NMRQCT 82
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ GT +++A+ +I VIA A P+ RG SG Q+ E+ +P K GL
Sbjct: 83 LQGTKMAVERAKSMIQDVIARAGNRPPPN---RGHFDGGMSGGGRQITHEMLIPGAKCGL 139
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I + + G + + +R+ G+ +++ A+ M++++L
Sbjct: 140 VIGKGGETIKNIQEQAGVKMVMIQE--TQESGGQPKPLRIIGEPDKVDTARRMVEDIL 195
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 286
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ AG AE + VP K GL+IG+GGETIK +
Sbjct: 287 TQFISELVNKSGAGS----------------GAEIFYMHVPANKTGLVIGKGGETIKQIC 330
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L P S E++ + G QI AQ +I+
Sbjct: 331 AESGAHVELSRDPPPN---SSEKVFIIKGTPYQIHHAQHIIR 369
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK---IQITRDADADPHAATRPVEIIGTL 256
++ ++ +P K G++IGK G+TI+ +Q +G K IQ T+++ P +P+ IIG
Sbjct: 126 ITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP----KPLRIIGEP 181
Query: 257 SNIDKAEKLINAVIAEAD-----AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+D A +++ ++ + G G G E+ VP VG+II
Sbjct: 182 DKVDTARRMVEDILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMII 241
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+GGETIK L SGA+IQ P E + +R + G QI A + I E+++++
Sbjct: 242 GKGGETIKRLAAESGAKIQFKPD---EDQTTPDRCAVIQGTTEQIAKATQFISELVNKS 297
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGL+IGRGGE I +Q++S R+Q+ PE DG+ R + G +E A
Sbjct: 38 IEVPDHCVGLVIGRGGEQISQIQSQSNCRVQM----SPESDGNNMRQCTLQGTKMAVERA 93
Query: 360 QEMIKEVLSQT-VRP--------STLSGGFNQQAYRPRVP 390
+ MI++V+++ RP +SGG Q + +P
Sbjct: 94 KSMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHEMLIP 133
>gi|45383580|ref|NP_989608.1| far upstream element-binding protein 2 [Gallus gallus]
gi|25091747|sp|Q8UVD9.1|FUBP2_CHICK RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=Zipcode-binding protein 2
gi|18252632|gb|AAL66365.1|AF461020_1 zipcode-binding protein [Gallus gallus]
Length = 769
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 101/177 (57%), Gaps = 20/177 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+T++ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G+
Sbjct: 207 TTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGSPE 263
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV-EIKVPNEKVGLIIGRGGE 316
+ KA+ +++ +++ GG P G A+G V EI +P K GL+IG+GGE
Sbjct: 264 AVQKAKLMLDDIVSRG-RGGPP-----GQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGE 317
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ R+G ++ I DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 318 TIKQLQERAGVKMIFIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 368
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDD-----STMSRKIEVPNNKVGVLIGKAGDTIRYL 225
E+V+ + ++ +V + P D + ++I +P K G++IGK G+TI+ L
Sbjct: 263 EAVQKAKLMLDDIVSRGRGGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQL 322
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q +G K+ +D + + +P+ IIG + +A +++ ++ E D GG G
Sbjct: 323 QERAGVKMIFIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------G 375
Query: 286 LATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-E 344
S +++ VP VG++IGR GE IK +Q +G RIQ + DG+ E
Sbjct: 376 DRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGPE 430
Query: 345 RIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+I + G + E A +I ++L Q++R
Sbjct: 431 KIAHIMGPPERCEHAARIINDLL-QSLR 457
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 390 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPERCEHAA 446
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--------EIKVPNEKVGLIIGRGG 315
++IN ++ +G + G + + +P K GL+IGRGG
Sbjct: 447 RIINDLLQSLRSGPPGPPGHGMPPGGRGRGRGQGIWGPPGGEMTFSIPTHKCGLVIGRGG 506
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E +K + + GA +++ Q P GD + + + + G +QIE A++ I+E +
Sbjct: 507 ENVKAINQQRGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIEHAKQPIEEKI 557
>gi|54648253|gb|AAH85004.1| KHSRP protein [Homo sapiens]
Length = 710
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 199
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 200 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 255
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 256 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 199 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 258
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 259 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 311
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 312 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 366
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 367 EKIAHIMGPPDRCEHAARIINDLL-QSLR 394
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 383
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 384 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 495
>gi|432876388|ref|XP_004073024.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 634
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 15/166 (9%)
Query: 205 EVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEK 264
+VP+ VG +IG+ G+ I +Q SG KIQI D+ RP + G+ +I++A++
Sbjct: 81 KVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGG---LMERPCSLTGSPESIEQAKR 137
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+ ++ G P + G E+ +P KVGL+IGRGG+TIK LQ R
Sbjct: 138 LLVQIVERCRNG--PGF------HGDSEGGTSVQEMLIPASKVGLVIGRGGDTIKQLQER 189
Query: 325 SGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+G ++ +I +P G ++ +R++GD +++ A+E++ EV+ +
Sbjct: 190 AGVKMMMIQDGPMPTG---ADKPLRISGDPYKVQAARELVLEVIRE 232
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 21/246 (8%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDS---TMSRKIEVPNNKVGVLIGKAGDTIRYLQY 227
ES+E + + Q+V+ + + P DS T +++ +P +KVG++IG+ GDTI+ LQ
Sbjct: 130 ESIEQAKRLLVQIVERCR-NGPGFHGDSEGGTSVQEMLIPASKVGLVIGRGGDTIKQLQE 188
Query: 228 NSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA 287
+G K+ + +D P A +P+ I G + A +L+ VI E D G+
Sbjct: 189 RAGVKMMMIQDGPM-PTGADKPLRISGDPYKVQAARELVLEVIREKDGDFRSGRSDFGVR 247
Query: 288 TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERI 346
S +++ VP VG++IGR GE IK +Q +G RIQ DG S ER+
Sbjct: 248 LGGTS-----LDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQ-----FKTDDGISPERV 297
Query: 347 VRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQP 406
V G + + A +I +++ QT + GF RV G W P Q
Sbjct: 298 AMVMGQPDRCQHAVHLINDLI-QTAQERD---GFGSSLRSGRV-RGRGDWTMGSPGPLQE 352
Query: 407 MAYDYP 412
+ Y P
Sbjct: 353 VTYTIP 358
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q ++G +IQ D P R ++G
Sbjct: 252 SLDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKTDDGISPE---RVAMVMGQPDRCQ 308
Query: 261 KAEKLINAVIA---EADAGGSP----SLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
A LIN +I E D GS + RG T + G ++V +P +K GL+IG+
Sbjct: 309 HAVHLINDLIQTAQERDGFGSSLRSGRVRGRGDWTMGSPGPLQEVTYTIPADKCGLVIGK 368
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
GGETIK + +SGA ++L P D R+ + G +Q+E+A+++I +
Sbjct: 369 GGETIKSINQQSGAHVELQRNPPPSTD-PNTRVFTIRGTAQQMEVARQLIDD 419
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
KVP+ VG IIGRGGE I +Q SG +IQ+ + G ER +TG IE A+
Sbjct: 81 KVPDRMVGFIIGRGGEQITRIQLESGCKIQIA----ADSGGLMERPCSLTGSPESIEQAK 136
Query: 361 EMIKEVLSQT 370
++ +++ +
Sbjct: 137 RLLVQIVERC 146
>gi|322790271|gb|EFZ15270.1| hypothetical protein SINV_11556 [Solenopsis invicta]
Length = 744
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 13/184 (7%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI 252
SS + I VP+ VG++IG+ G+ I LQ +G KIQ+ ++ P R +
Sbjct: 94 SSNLGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPE---RVCTL 150
Query: 253 IGTLSNIDKAEKLINAVIAE-------ADAGGSPSLVARGLATAQASGAAEQVEIKVPNE 305
G+ +++A++L+ +++ + D S G + G VEI +P
Sbjct: 151 TGSREAVNRAKELVLSIVNQRSRSEGIGDMNMSSGGGGGGGGSGGMMGHPGFVEIMIPGP 210
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
KVGLIIG+GGETIK LQ +SGA++ +I Q P + +E+ +R+TGD +++E A++++ E
Sbjct: 211 KVGLIIGKGGETIKQLQEKSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEYAKQLVYE 267
Query: 366 VLSQ 369
++++
Sbjct: 268 LIAE 271
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 100/186 (53%), Gaps = 21/186 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 204 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQ--EKPLRITGDPQKVEYA 261
Query: 263 EKLINAVIAEADA----------GGSPSLVARGLATAQASGA------AEQVEIKVPNEK 306
++L+ +IAE + GG G + SG ++ VE+ VP
Sbjct: 262 KQLVYELIAEKEMQMFHRGGRGGGGGGGTDRTGGNYSNDSGFNHGPANSDGVEVLVPRAA 321
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VG++IG+GG+ IK +Q SGA++Q Q E DG +R ++G + +E A++ I+E+
Sbjct: 322 VGVVIGKGGDMIKKIQAESGAKVQF--QQGRE-DGPGDRKCLLSGKHQAVEQARQRIQEL 378
Query: 367 LSQTVR 372
+ +R
Sbjct: 379 IDSVMR 384
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VGV+IGK GD I+ +Q SGAK+Q + + P R + G +++A
Sbjct: 314 EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGP--GDRKCLLSGKHQAVEQA 371
Query: 263 ----EKLINAVIAEADAGGSPSLVARGLATA----------------QASGAAEQVE--I 300
++LI++V+ D + Q +++E
Sbjct: 372 RQRIQELIDSVMRRDDGRNNMGGRGGPRGNGFGNNRNPNEYGSWDRRQGGPMQDKIETTF 431
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
VP+ K G+IIG+GGETIK + ++GA +L ++ E+I + G+ Q+E A+
Sbjct: 432 TVPSSKCGIIIGKGGETIKQINQQTGAHCELDRKNQSN---ENEKIFIIRGNPEQVEHAK 488
Query: 361 EMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYD 410
+ E L S+ +G Y P TG W P+QP + D
Sbjct: 489 RIFSEKLGMGPAGSSYAGTQGAVGYNPNWNTGYQAW------PNQPQSND 532
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I+VP++ VGLIIGRGGE I LQ+ +G +IQ+ PE G ER+ +TG +
Sbjct: 104 DIRVPDKMVGLIIGRGGEQITRLQSETGCKIQM----APESGGLPERVCTLTGSREAVNR 159
Query: 359 AQEMIKEVLSQTVR 372
A+E++ +++Q R
Sbjct: 160 AKELVLSIVNQRSR 173
>gi|393911660|gb|EJD76408.1| KH domain-containing protein [Loa loa]
Length = 635
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 101/178 (56%), Gaps = 8/178 (4%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P + + +EVP++ VG++IG+ G+ I +Q + ++Q++ ++D + R
Sbjct: 78 PVGSVGEVVMETMEVPDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGN---NMRQCT 134
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ G+ ++D+A +IN VIA A P+ G Q+ E+ +P K GL
Sbjct: 135 LQGSKMSVDRARAMINEVIARAGNRPPPNRTGH-FDGGIPVGTGRQITQEMFIPGAKCGL 193
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I ++ + G + + +R+TGD ++E A+ M++E+L
Sbjct: 194 VIGKGGETIKNIQEQTGVKMVMIQEN--QESGGQPKPLRITGDPEKVENARRMVEEIL 249
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA
Sbjct: 277 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQE--RCAVIQGTAEQIAKA 334
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ A +G AE + VP+ K GL+IG+GGETIK +
Sbjct: 335 TQFISELVKKSGA----------------AGGAEMFYMHVPSNKTGLVIGKGGETIKQIC 378
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L P + E++ + G QI AQ +I+
Sbjct: 379 AESGAHVELSRDPPPN---ASEKVFIIKGTPYQIHHAQHIIR 417
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
++VP+ VGL+IGRGGE I +Q+++ R+Q+ PE DG+ R + G ++ A
Sbjct: 90 MEVPDHCVGLVIGRGGEQISQIQSQTNCRVQM----SPESDGNNMRQCTLQGSKMSVDRA 145
Query: 360 QEMIKEVLSQ 369
+ MI EV+++
Sbjct: 146 RAMINEVIAR 155
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP+N VG++IG+ G+ I LQ +G KIQ+ ++ T + G+ +++A+
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMASESGLPERVCT----LTGSREAVNRAK 167
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ +++ + + + ++ G VEI +P KVGLIIG+GGETIK LQ
Sbjct: 168 ELVLSIVNQRSR--TEGIGDMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQE 225
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+SGA++ +I Q P + +E+ +R+TGD +++E A++++ E++++
Sbjct: 226 KSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEYAKQLVYELIAE 268
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 22/183 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 201 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQE--KPLRITGDPQKVEYA 258
Query: 263 EKLINAVIAEADAGGSPSLVARGLATA-------------QASGAAEQVEIKVPNEKVGL 309
++L+ +IAE + + RG + SG + VE+ VP VG+
Sbjct: 259 KQLVYELIAEKEM----QMFHRGSRGSDRSGNYSNDSNFNHGSGTTDGVEVLVPRAAVGV 314
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IG+GG+ IK +Q +GAR+Q Q E DG +R V+G + +E ++ I+E++
Sbjct: 315 VIGKGGDMIKKIQAETGARVQF--QQGRE-DGPGDRKCIVSGKHQAVEQVRQRIQELIDS 371
Query: 370 TVR 372
+R
Sbjct: 372 VMR 374
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 42/252 (16%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
++S + S T D ++ VP VGV+IGK GD I+ +Q +GA++Q + + P
Sbjct: 289 NDSNFNHGSGTTDGV---EVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGP- 344
Query: 245 AATRPVEIIGTLSNID----KAEKLINAVIAEADAGGSPSLVAR---------------- 284
R + G ++ + ++LI++V+ D G ++ R
Sbjct: 345 -GDRKCIVSGKHQAVEQVRQRIQELIDSVMRRDD--GRSNMGTRSGPRGNGFSNNRNPNE 401
Query: 285 --GLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD 340
G Q +++E VP+ K G+IIG+GGETIK + ++GA +L ++
Sbjct: 402 YGGWDRRQGGPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSN-- 459
Query: 341 GSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPP--QWGP 398
E+I + G+ Q+E A+ + E L ++ +G Y P G W
Sbjct: 460 -ENEKIFIIRGNPEQVEHAKRIFSEKLGMAPANTSFTGTQGAIGYNPTWNAGTAYQAW-- 516
Query: 399 RGSHPSQPMAYD 410
PSQP + D
Sbjct: 517 ----PSQPQSTD 524
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I+VP+ VGLIIGRGGE I LQ+ +G +IQ+ + G ER+ +TG +
Sbjct: 111 DIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMASE-----SGLPERVCTLTGSREAVNR 165
Query: 359 AQEMIKEVLSQTVR 372
A+E++ +++Q R
Sbjct: 166 AKELVLSIVNQRSR 179
>gi|160333253|ref|NP_001103813.1| P-element somatic inhibitor [Bombyx mori]
gi|159031799|dbj|BAF91871.1| Bombyx homolog of P-element somatic inhibitor [Bombyx mori]
Length = 703
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 102/177 (57%), Gaps = 10/177 (5%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D +++ I VP+ VG++IG+ G+ I LQ SG KIQ+ D +P R + G+
Sbjct: 99 DQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPD---RLCTLTGSR 155
Query: 257 SNIDKAEKLINAVIAEADAGGSPSL---VARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
I +A++L+N ++ +P G+ ++ A + EI +P KVGLIIG+
Sbjct: 156 DAIQRAKELVNQIVNHRGRENAPQHQDPSEPGMNMSRPGPNAME-EIMIPGAKVGLIIGK 214
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSK--ERIVRVTGDMRQIEIAQEMIKEVLS 368
G+TIK LQ ++GA++ +I Q P + K E+ +R++GD ++E A++++ E+L+
Sbjct: 215 NGKTIKQLQEQTGAKMVVI-QDGPNENSFKPQEKPLRISGDPAKVEHAKQLVFELLA 270
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+T S ++ VP +GV+IG G I+ +Q ++G ++Q ++ D +P + + G
Sbjct: 295 ATTSAEVLVPKVAIGVVIGHKGKMIKKIQADTGCRVQFNQEHDEEP--GDKLCYLQGKPH 352
Query: 258 NIDKAEKLINAVIAEADAG--GSPSLVARGLATAQAS-GAAE-----------QVEIKVP 303
+D+A ++I +I+ S S RG G E +V +
Sbjct: 353 QLDQARQMIEDLISSVKRCEEDSRSRAVRGQGQQNGDRGGMEYGQQWPDRPEMRVTFTIH 412
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
K GL+IGRGGE IK + +SGA +L + ++ I+R G +E + +I
Sbjct: 413 GPKCGLVIGRGGEIIKQINAQSGAHCELDRRCQSNDRNTRTFIIR--GHPEAVETCKRII 470
Query: 364 KE 365
E
Sbjct: 471 ME 472
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGLIIGRGGE I LQ SG +IQ+ P DG+ +R+ +TG I+ A
Sbjct: 106 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPT----DGNPDRLCTLTGSRDAIQRA 161
Query: 360 QEMIKEVLSQTVR 372
+E++ ++++ R
Sbjct: 162 KELVNQIVNHRGR 174
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 98/166 (59%), Gaps = 8/166 (4%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+EVP++ VG++IG+ G+ I +Q + ++Q++ ++D + R + G+ ++D+A
Sbjct: 37 MEVPDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGN---NMRQCTLQGSKMSVDRAR 93
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGLIIGRGGETIKGL 321
+IN VIA A P+ G Q+ E+ +P K GL+IG+GGETIK +
Sbjct: 94 AMINEVIARAGNRPPPNRAGH-FDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNI 152
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
Q ++G ++ +I ++ + G + + +R+TGD ++E A+ M++E+L
Sbjct: 153 QEQTGVKMVMIQEN--QESGGQPKPLRITGDPEKVENARRMVEEIL 196
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D A R I GT I KA
Sbjct: 224 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDDDQTAQERCAVIQGTAEQIAKA 281
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ A +G AE + VP+ K GL+IG+GGETIK +
Sbjct: 282 TQFISELVKKSGA----------------AGGAEMFYMHVPSNKTGLVIGKGGETIKQIC 325
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L P + E++ + G QI AQ +I+
Sbjct: 326 AESGAHVELSRDPPPN---ASEKVFIIKGTPYQIHHAQHIIR 364
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+++++ +P K G++IGK G+TI+ +Q +G K+ + ++ + + +P+ I G +
Sbjct: 127 ITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQE-NQESGGQPKPLRITGDPEKV 185
Query: 260 DKAEKLINAVIAEAD-----AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+ A +++ ++ + G P + G++ Q S E+ VP VG+IIG+G
Sbjct: 186 ENARRMVEEILQSREDHPPGHFGFPG--SFGISGGQRSIG----EVIVPRASVGMIIGKG 239
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
GETIK L SGA+IQ P + ++ER + G QI A + I E++ ++
Sbjct: 240 GETIKRLAAESGAKIQFKPD---DDQTAQERCAVIQGTAEQIAKATQFISELVKKS 292
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
++VP+ VGL+IGRGGE I +Q+++ R+Q+ PE DG+ R + G ++ A
Sbjct: 37 MEVPDHCVGLVIGRGGEQISQIQSQTNCRVQM----SPESDGNNMRQCTLQGSKMSVDRA 92
Query: 360 QEMIKEVLSQ 369
+ MI EV+++
Sbjct: 93 RAMINEVIAR 102
>gi|440638759|gb|ELR08678.1| hypothetical protein GMDG_03364 [Geomyces destructans 20631-21]
Length = 572
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 15/179 (8%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+
Sbjct: 306 DGEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GEQKSVNGLRPVNLIGSR 363
Query: 257 SNIDKAEKLINAVI-----AEADAGGSP---SLVARGLATAQASGAAEQVE--IKVPNEK 306
+A+ LI ++ + A+ G +P AR ASG A++V I VP+E
Sbjct: 364 EAAAQAKDLIMEIVESDSKSAAEKGRAPPPQREPARDANYGGASGGADKVNDSIYVPSEA 423
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VG+IIG+GGETIK +Q +G +I + P P G ER + + G IE A+ I++
Sbjct: 424 VGMIIGKGGETIKDMQNTTGCKINVTPSSGP---GEVEREIGLVGSRDSIERAKLAIED 479
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I + +N VG++IG+ G+ +R ++ + ++Q ++ + R +I G +
Sbjct: 205 SEIITIESNLVGLIIGRQGENLRRVEAETACRVQFI--PISEENGPFRQCKISGPRARRA 262
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAA---------------EQVEIKVPNE 305
+A IN +I ++ G AR A Q AA + ++I VP+
Sbjct: 263 EAIAEINRIIDDSGMGSG----ARAGADRQGKDAAPARASSHQPALRDGEDSMQIMVPDR 318
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG + ++ + + + R V + G A+++I E
Sbjct: 319 TVGLIIGRGGETIRDLQERSGCHVNIVGE---QKSVNGLRPVNLIGSREAAAQAKDLIME 375
Query: 366 VL 367
++
Sbjct: 376 IV 377
>gi|260797497|ref|XP_002593739.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
gi|229278967|gb|EEN49750.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
Length = 730
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 104/187 (55%), Gaps = 32/187 (17%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI 252
SS ++ + VP+ VG++IG+ G+ I LQ SG K+Q+ +D+ P R +
Sbjct: 104 SSRAGGVVTEEYRVPDKMVGLIIGRGGEQITRLQAESGCKVQMAQDSGGLPE---RVCTL 160
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ-----------VEIK 301
GT +I+ A++LI+ +I + ++SGA EQ E+
Sbjct: 161 TGTPPSIEHAKRLIDQIIEKG----------------RSSGATEQPGTTLPDGSIVTEMM 204
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
+P KVGL+IG+GGETI+ LQ R+G ++ +I Q P + + E+ +R+TGD ++ + A++
Sbjct: 205 IPGNKVGLVIGKGGETIRSLQERAGVKMVMI-QDGPYMN-APEKPLRITGDPQKTQRAKD 262
Query: 362 MIKEVLS 368
++ ++++
Sbjct: 263 LVMDLIT 269
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 172 SVEPSNVVPQQVVDNSKS----DDPSSTD-DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQ 226
S+E + + Q+++ +S + P +T D ++ ++ +P NKVG++IGK G+TIR LQ
Sbjct: 166 SIEHAKRLIDQIIEKGRSSGATEQPGTTLPDGSIVTEMMIPGNKVGLVIGKGGETIRSLQ 225
Query: 227 YNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADA----------- 275
+G K+ + +D +A +P+ I G +A+ L+ +I + +
Sbjct: 226 ERAGVKMVMIQDGPY-MNAPEKPLRITGDPQKTQRAKDLVMDLITDKELEVGEGEFFGGG 284
Query: 276 -----GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
G +A+ ++I VP VG++IG+GGE IK +Q SG R+Q
Sbjct: 285 PPGMRRGGRDFDTNDYGSARGG-GGGGMDIPVPRFAVGIVIGKGGEMIKKIQNESGVRVQ 343
Query: 331 LIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
P DG R+ ++ G + + A I+ ++
Sbjct: 344 FKPD-----DGQNPNRVCQLIGAPDRCQAAAHTIQNLV 376
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 22/197 (11%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP VG++IGK G+ I+ +Q SG ++Q D +P+ R ++IG A
Sbjct: 313 IPVPRFAVGIVIGKGGEMIKKIQNESGVRVQFKPDDGQNPN---RVCQLIGAPDRCQAAA 369
Query: 264 KLINAVIAEA---------DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I ++ +A G G E VPN K GL+IG+G
Sbjct: 370 HTIQNLVEDAQQRDQAGGGPGMGRGRGRGDWGRGPGGPGPMRTDEFPVPNNKCGLVIGKG 429
Query: 315 GETIKGLQTRSGARIQLI---PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
GE+I+ + +SGA ++L+ P H G ++ + G +QI+ A+++I E +S +
Sbjct: 430 GESIRTINQQSGAHVELMRNPPPHCEPG----MKMFSIRGSPQQIDHAKQLIHEKISDDM 485
Query: 372 RPSTLSGGFNQQAYRPR 388
GF + + PR
Sbjct: 486 HEPF---GFGDRPFHPR 499
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
R ++++A G + E +VP++ VGLIIGRGGE I LQ SG ++Q+ + G
Sbjct: 100 RNFSSSRAGGVVTE-EYRVPDKMVGLIIGRGGEQITRLQAESGCKVQM----AQDSGGLP 154
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
ER+ +TG IE A+ +I +++ +
Sbjct: 155 ERVCTLTGTPPSIEHAKRLIDQIIEK 180
>gi|341896366|gb|EGT52301.1| hypothetical protein CAEBREN_06932 [Caenorhabditis brenneri]
Length = 538
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 25/217 (11%)
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA 241
QV++ ++ P+ + D ++ I +P++K+G++IGK G+TIR +Q SG + T +
Sbjct: 120 QVINRNQGIVPTESTDDEVTEDILIPSDKIGLVIGKGGETIRTVQEQSGLR---TCNVVQ 176
Query: 242 DPHAAT---RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ--ASGAAE 296
D +AT +P+ + GT + ++ A+ L+ ++ G+ S++ + L + A G
Sbjct: 177 DSTSATGQPKPLRMSGTPTAVETAKALVTNIMNNIQ--GNISMLQKSLHSDAYPARG--- 231
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
E+ VP G+IIG+GGE IK L +G +IQ P P S++RI + G QI
Sbjct: 232 --EVIVPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPDSDPN---SEDRIAVIVGSREQI 286
Query: 357 EIAQEMIKEVLSQTVRPSTLSGGFN---QQAYRPRVP 390
A E I E++++ ++ + G N QQ + VP
Sbjct: 287 YRATERITEIVNKAIK----NNGVNPNGQQIFYLHVP 319
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 14/184 (7%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP VG++IGK G IR +Q S ++Q+ DAD + R I GT + A+++
Sbjct: 60 VPEKMVGLVIGKGGTEIRLIQQTSACRVQM--DADDQSNDGIRNCTIEGTPDQVAIAKQM 117
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I VI +G+ +++ +I +P++K+GL+IG+GGETI+ +Q +S
Sbjct: 118 ITQVINR----------NQGIVPTESTDDEVTEDILIPSDKIGLVIGKGGETIRTVQEQS 167
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLSGGFNQQA 384
G R + Q G + + +R++G +E A+ ++ +++ S L + A
Sbjct: 168 GLRTCNVVQDSTSATG-QPKPLRMSGTPTAVETAKALVTNIMNNIQGNISMLQKSLHSDA 226
Query: 385 YRPR 388
Y R
Sbjct: 227 YPAR 230
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP G++IGK G+ I+ L +G KIQ D+DP++ R I+G+ I +A
Sbjct: 232 EVIVPRLSAGMIIGKGGEMIKRLAQETGTKIQF--KPDSDPNSEDRIAVIVGSREQIYRA 289
Query: 263 EKLINAVIAEA--DAGGSPSLVARGLATAQASGAAEQVE-IKVPNEKVGLIIGRGGETIK 319
+ I ++ +A + G +P+ +Q+ + VP K GL+IG+GGE IK
Sbjct: 290 TERITEIVNKAIKNNGVNPN--------------GQQIFYLHVPASKCGLVIGKGGENIK 335
Query: 320 GLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
++ +GA L P D E++ + G QI A ++K
Sbjct: 336 QIERDTGATCGLAGPAEQKNDD---EKVFEIKGTQFQIHHAAHLVK 378
>gi|348536136|ref|XP_003455553.1| PREDICTED: far upstream element-binding protein 3 [Oreochromis
niloticus]
Length = 556
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 15/166 (9%)
Query: 205 EVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEK 264
+VP+ VG +IG+ G+ I +Q SG KIQI + RP + GT +I++A++
Sbjct: 86 KVPDRMVGFIIGRGGEQITRIQLESGCKIQIAPEGGG---LMERPCSLTGTPESIEQAKR 142
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
L+ ++ G P G G A E+ +P KVGL+IGRGG+TIK LQ R
Sbjct: 143 LLAQIVDRCRNG--PGFHGDG------EGGASVQEMLIPASKVGLVIGRGGDTIKQLQER 194
Query: 325 SGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+G ++ +I +P G ++ +R++GD +++ A+E++ EV+ +
Sbjct: 195 AGVKMMMIQDGPMPTG---ADKPLRISGDPYKVQAARELVLEVIRE 237
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG+ G+ I+ +Q ++G +IQ D D + R ++G
Sbjct: 257 SLDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKAD---DGISLERVAMVMGQPDRCQ 313
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLA----TAQASGAAEQVEIKVPNEKVGLIIGR 313
A LIN +I E D GS R T + G ++V +P +K GL+IG+
Sbjct: 314 HAVHLINELIQTAQERDGFGSALRGGRVRGRGDWTMGSPGPVQEVTYTIPADKCGLVIGK 373
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
GGETIK + +SGA ++L P D R+ + G +Q+++A+++I +
Sbjct: 374 GGETIKSINQQSGAHVELQRNPPPSTD-PNTRVFTIRGTAQQMDLARQLIDD 424
>gi|344257955|gb|EGW14059.1| Far upstream element-binding protein 3 [Cricetulus griseus]
Length = 493
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 13/189 (6%)
Query: 182 QVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
Q+VD ++ + D ++ +++ +P +KVG++IGK G+TI+ LQ +G K+ + +D
Sbjct: 66 QIVDRCRNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDG 125
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE 299
P A +P+ I G + +A +++ +I E D + RG ++A G + +E
Sbjct: 126 PL-PTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGV--RGDFASRAGGGS--IE 180
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIVRVTGDMRQIEI 358
+ VP VG++IGR GE IK +Q +G RIQ P DG S ER +V G + +
Sbjct: 181 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAAQVMGPPDRCQH 235
Query: 359 AQEMIKEVL 367
A +I E++
Sbjct: 236 AAHIINELI 244
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 178 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 234
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +IN +I E D G GLA A+ G +++ VP +
Sbjct: 235 HAAHIINELILTAQERDGLG-------GLAVARGRGRGRGDWSVGTPGGVQEITYTVPAD 287
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 288 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PNLRIFTIRGAPQQIEVARHLIDE 346
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 12/118 (10%)
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
+G L + +A++L+ ++ G G +T Q E+ +P KVGL+IG
Sbjct: 51 LGALVHQRQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQ--------ELLIPASKVGLVIG 102
Query: 313 RGGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+GGETIK LQ R+G ++ +I LP G ++ +R+TGD +++ A+EM+ E++ +
Sbjct: 103 KGGETIKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQQAREMVLEIIRE 157
>gi|326480928|gb|EGE04938.1| KH domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 563
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 23/202 (11%)
Query: 149 FIDVKEETKEVTVKEE---ETVKEEESVEPSNVVPQQVVDNSKSDD--PSSTD------D 197
F+D E K + + ++++++ E +V + +N +D PS D D
Sbjct: 225 FLDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIVSE---NNQARNDGRPSGQDGRPGDAD 281
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ + KI VP+ VG++IG++G+T+R L SG +I I RD ++ RPV + G+
Sbjct: 282 GSETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGES--INGLRPVTLTGSQQ 339
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVAR----GLATAQASGAAEQVEIK--VPNEKVGLII 311
I +A++LI ++ E+D S + R + + G E++ K +P E VG++I
Sbjct: 340 AIQRAKELILGIV-ESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVI 398
Query: 312 GRGGETIKGLQTRSGARIQLIP 333
G+GGETI+ LQT SG +I ++P
Sbjct: 399 GKGGETIRELQTLSGCKINILP 420
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 19/178 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT-RPVEIIGTLSNIDKA 262
IE+ N VG++IG+ G+ +R ++ +GA++Q D+ H T R + G S DKA
Sbjct: 194 IEIDNKHVGLIIGRQGENLRRIENETGARVQFL---DSAEHNKTIRLCRLSGPKSIRDKA 250
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ I+ +++E A G PS + A G +E +I VP+ VGL+IGR GET++
Sbjct: 251 KAEIDRIVSENNQARNDGRPS--GQDGRPGDADG-SETTKIMVPDRTVGLVIGRSGETVR 307
Query: 320 GLQTRSGARIQLIPQHLPEGDG---SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
L RSG RI + DG + R V +TG + I+ A+E+I ++ R S
Sbjct: 308 DLAERSGCRINIAR------DGESINGLRPVTLTGSQQAIQRAKELILGIVESDTRTS 359
>gi|326473929|gb|EGD97938.1| hypothetical protein TESG_05238 [Trichophyton tonsurans CBS 112818]
Length = 545
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 23/202 (11%)
Query: 149 FIDVKEETKEVTVKEE---ETVKEEESVEPSNVVPQQVVDNSKSDD--PSSTD------D 197
F+D E K + + ++++++ E +V + +N +D PS D D
Sbjct: 225 FLDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIVSE---NNQARNDGRPSGQDGRPGDAD 281
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ + KI VP+ VG++IG++G+T+R L SG +I I RD ++ RPV + G+
Sbjct: 282 GSETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGES--INGLRPVTLTGSQQ 339
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVAR----GLATAQASGAAEQVEIK--VPNEKVGLII 311
I +A++LI ++ E+D S + R + + G E++ K +P E VG++I
Sbjct: 340 AIQRAKELILGIV-ESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVI 398
Query: 312 GRGGETIKGLQTRSGARIQLIP 333
G+GGETI+ LQT SG +I ++P
Sbjct: 399 GKGGETIRELQTLSGCKINILP 420
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 19/178 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT-RPVEIIGTLSNIDKA 262
IE+ N VG++IG+ G+ +R ++ +GA++Q D+ H T R + G S DKA
Sbjct: 194 IEIDNKHVGLIIGRQGENLRRIENETGARVQFL---DSAEHNKTIRLCRLSGPKSIRDKA 250
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ I+ +++E A G PS + A G +E +I VP+ VGL+IGR GET++
Sbjct: 251 KAEIDRIVSENNQARNDGRPS--GQDGRPGDADG-SETTKIMVPDRTVGLVIGRSGETVR 307
Query: 320 GLQTRSGARIQLIPQHLPEGDG---SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
L RSG RI + DG + R V +TG + I+ A+E+I ++ R S
Sbjct: 308 DLAERSGCRINIAR------DGESINGLRPVTLTGSQQAIQRAKELILGIVESDTRTS 359
>gi|47085903|ref|NP_998309.1| far upstream element-binding protein 1 [Danio rerio]
gi|40555849|gb|AAH64649.1| Far upstream element (FUSE) binding protein 1 [Danio rerio]
Length = 642
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 15/170 (8%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
++S + +VP+ VG +IG+ G+ I LQ SG KIQI D+ P R V + G+
Sbjct: 89 SVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPD---RSVTLTGSPDA 145
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV-EIKVPNEKVGLIIGRGGET 317
I A++L++ ++ + G PS A G V E+ +P K GL+IG+GGET
Sbjct: 146 IMTAKRLLSEIVEK----GRPSP-----AFHHNDGPGMSVHEMMIPASKAGLVIGKGGET 196
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R++GD +++ A++M+ +++
Sbjct: 197 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRISGDPFKVQQAKDMVMDLI 244
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ +P +K G++IGK G+TI+ LQ +G K+ + +D + A +P+ I G + +A
Sbjct: 178 EMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQN-TGADKPLRISGDPFKVQQA 236
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ ++ +I D G G G E +++ VP VG++IGR GE IK +Q
Sbjct: 237 KDMVMDLIR--DQGFREQRGEYGSRAGGGGGGGESLDVPVPRFAVGIVIGRSGEMIKKIQ 294
Query: 323 TRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
+G RIQ P DGS ERI ++ G + + A ++I ++L
Sbjct: 295 NDTGVRIQFKPD-----DGSTPERIAQIMGPPDRAQHAADIITDLL 335
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S + VP VG++IG++G+ I+ +Q ++G +IQ D + P R +I+G
Sbjct: 269 SLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFKPDDGSTPE---RIAQIMGPPDRAQ 325
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQAS--------------GAAEQVEIKVPNEK 306
A +I ++ AGG P G G ++ VP K
Sbjct: 326 HAADIITDLLRSVQAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMK 385
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
GLIIG+GGETIK + +SGARI+L P D +I V G +QI+ A+++++E
Sbjct: 386 TGLIIGKGGETIKNISQQSGARIELQRNPPPNSD-PNIKIFTVRGSPQQIDYARQLVEEK 444
Query: 367 L 367
+
Sbjct: 445 I 445
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I LQ SG +IQ+ P+ G +R V +TG I
Sbjct: 93 EFKVPDGMVGFIIGRGGEQISRLQQESGCKIQI----APDSGGMPDRSVTLTGSPDAIMT 148
Query: 359 AQEMIKEVLSQTVRPS 374
A+ ++ E++ + RPS
Sbjct: 149 AKRLLSEIVEKG-RPS 163
>gi|441629120|ref|XP_003281628.2| PREDICTED: far upstream element-binding protein 2-like [Nomascus
leucogenys]
Length = 805
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 96/169 (56%), Gaps = 17/169 (10%)
Query: 205 EVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEK 264
VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G ++ KA+
Sbjct: 237 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPESVQKAKM 293
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
+++ +++ GG P A +G + EI +P K GL+IG+GGETIK LQ R
Sbjct: 294 MLDDIVSRGR-GGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETIKQLQER 349
Query: 325 SGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 350 AGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 392
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 286 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 345
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 346 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 398
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 399 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 453
Query: 344 ERIVRVTGDMRQIEIAQEMI 363
E+I + G + E A +I
Sbjct: 454 EKIAHIMGPPDRCEHAARII 473
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 414 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 470
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE------QVEIKVPNEKVGLIIGRGGET 317
++I G + G ++ +P K GL+IGRGGE
Sbjct: 471 RIIXXXXXXXPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGEN 530
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 531 VKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 579
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E +VP+ VGLIIGRGGE I +Q SG ++Q+ P+ G ER V +TG ++
Sbjct: 235 EYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQI----SPDSGGLPERSVSLTGAPESVQK 290
Query: 359 AQEMIKEVLSQ 369
A+ M+ +++S+
Sbjct: 291 AKMMLDDIVSR 301
>gi|308465473|ref|XP_003094996.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
gi|308246261|gb|EFO90213.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
Length = 580
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA 241
QV+ +++ P + ++ ++ +P +K+G++IGK GDTIR LQ SG ++ +
Sbjct: 123 QVISRNQTGVPQTVATGEVTEEMLIPADKIGLVIGKGGDTIRTLQDQSGLRL---LNVVQ 179
Query: 242 DPHAAT---RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV 298
D +AT +P+ ++GT + I+ A+ L++ ++ + G+P L+ RG ++
Sbjct: 180 DSSSATGQPKPLRMVGTPAAIETAKALVHNIMNSSP--GNPPLLPRGGQSSGGQYGGYGG 237
Query: 299 -----EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDM 353
E+ VP G+IIG+GGE IK L +G +IQ P P S++R+ + G
Sbjct: 238 QEAKGEVIVPRVSAGMIIGKGGEMIKRLAMETGTKIQFKPDANPN---SEDRVAVIMGTR 294
Query: 354 RQIEIAQEMIKEVLSQTVR 372
QI A E I E++++ ++
Sbjct: 295 DQIYRATERITEIVNRAIK 313
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S+ D + D + +VP VG++IGK G IR +Q SG ++Q+ D D
Sbjct: 40 SEIGDLNMGDTDKIIEIYQVPEKVVGLVIGKGGSEIRLIQQTSGCRVQM--DPDHQSVNG 97
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
R I G + A+++I + + G P VA G T E+ +P
Sbjct: 98 IRNCTIEGPPDQVAIAKQMITQCFFQVISRNQTGVPQTVATGEVTE---------EMLIP 148
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+K+GL+IG+GG+TI+ LQ +SG R+ + Q G + + +R+ G IE A+ ++
Sbjct: 149 ADKIGLVIGKGGDTIRTLQDQSGLRLLNVVQDSSSATG-QPKPLRMVGTPAAIETAKALV 207
Query: 364 KEVLSQT 370
+++ +
Sbjct: 208 HNIMNSS 214
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP G++IGK G+ I+ L +G KIQ DA+P++ R I+GT I +A
Sbjct: 243 EVIVPRVSAGMIIGKGGEMIKRLAMETGTKIQF--KPDANPNSEDRVAVIMGTRDQIYRA 300
Query: 263 EKLINAVIAEADA---GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ I ++ A GS S++ Q++ + VP K GL+IG+GGE IK
Sbjct: 301 TERITEIVNRAIKNGQAGSGSILGGNNILGQST-----FYMHVPATKCGLVIGKGGENIK 355
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
++ SGA L E E++ + G QI A ++K
Sbjct: 356 QIERDSGASCGLAAAS--EQKNEDEKVFEIKGTQYQIHHASHLVK 398
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 298 VEI-KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
+EI +VP + VGL+IG+GG I+ +Q SG R+Q+ P H + R + G Q+
Sbjct: 54 IEIYQVPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSV---NGIRNCTIEGPPDQV 110
Query: 357 EIAQEMIKEVLSQTV 371
IA++MI + Q +
Sbjct: 111 AIAKQMITQCFFQVI 125
>gi|351713497|gb|EHB16416.1| Far upstream element-binding protein 2, partial [Heterocephalus
glaber]
Length = 522
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++++ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 61 TSVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 117
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P Q E EI +P K GL+IG+GGET
Sbjct: 118 SVQKAKMMLDDIVSRG-RGGPPGQFHDSANGGQNGTVQE--EIMIPAGKAGLVIGKGGET 174
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 175 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 224
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDS-------TMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + ++ +V + P DS T+ +I +P K G++IGK G+TI+
Sbjct: 117 ESVQKAKMMLDDIVSRGRGGPPGQFHDSANGGQNGTVQEEIMIPAGKAGLVIGKGGETIK 176
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 177 QLQERAGVKMILIQDGSQNTN-VDKPLRIIGDPYKVQQACEMVMDILRERDQGGF----- 230
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 231 -GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTG 284
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 285 PEKIAHIMGPPDRCEHAARIINDLL-QSLR 313
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 246 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 302
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 303 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGSWGPPGGEMTFSIPTHKCGLVIGRG 362
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 363 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 414
>gi|426230667|ref|XP_004009386.1| PREDICTED: far upstream element-binding protein 2 [Ovis aries]
Length = 484
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 63 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 119
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 120 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 175
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 176 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 225
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 119 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 178
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 179 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 231
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 232 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 286
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 287 EKIAHIMGPPDRCEHAARIINDLL-QSLR 314
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 247 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 303
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 304 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 363
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 364 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 415
>gi|281339770|gb|EFB15354.1| hypothetical protein PANDA_017644 [Ailuropoda melanoleuca]
Length = 481
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 117 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 172
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 173 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 222
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 116 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 175
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 176 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 228
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 229 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 283
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 284 EKIAHIMGPPDRCEHAARIINDLL-QSLR 311
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 244 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 300
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 301 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 360
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 361 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 412
>gi|384487866|gb|EIE80046.1| hypothetical protein RO3G_04751 [Rhizopus delemar RA 99-880]
Length = 401
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 122/221 (55%), Gaps = 27/221 (12%)
Query: 166 TVKEEESVEPSNVVPQQVVDNSKSDDPSST------------DDSTMSRKIEVPNNKVGV 213
V E + + + + +Q+VD++K+++ S T +++ + I +P KVG+
Sbjct: 40 LVGESDQISKARDMIRQMVDDAKANEASRTAPPSGYHHYQGNNNANNTATIRIPVPKVGL 99
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IG+ G+TIR + S AKI + D+ D + R + +IG + + A++LI ++
Sbjct: 100 VIGRGGETIREFEQQSRAKILLPSDSSNDVNN-ERVITLIGDDAAVQHAKRLIEEIVY-- 156
Query: 274 DAGGSPSLVA-----RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
GSP+L A GL + +++ + +P VGLIIGRGGETI+ Q +SGAR
Sbjct: 157 ---GSPNLAAPRYSQYGLGHP-GNPNDQRIYVPIPTTVVGLIIGRGGETIRYFQEQSGAR 212
Query: 329 IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+++ L ++ER V +TG+ + + +A+ +++E +++
Sbjct: 213 VKV---DLTGDPNAEERNVCITGEPQALAVAKRLVEEKVAE 250
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 23/167 (13%)
Query: 211 VGVLIGKAGDTIRYLQYNSG-AKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAV 269
VG+LIGK G+ ++ ++ +SG +K+Q +D R V ++G I KA +I +
Sbjct: 2 VGLLIGKGGENLKKIERSSGVSKVQFAQDTS----GPERIVYLVGESDQISKARDMIRQM 57
Query: 270 IAEADAGGSPSLVARGLATAQASG---------AAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ +A A + TA SG A I++P KVGL+IGRGGETI+
Sbjct: 58 VDDAKANEASR-------TAPPSGYHHYQGNNNANNTATIRIPVPKVGLVIGRGGETIRE 110
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+ +S A+I L+P D + ER++ + GD ++ A+ +I+E++
Sbjct: 111 FEQQSRAKI-LLPSD-SSNDVNNERVITLIGDDAAVQHAKRLIEEIV 155
>gi|344306102|ref|XP_003421728.1| PREDICTED: far upstream element-binding protein 2-like [Loxodonta
africana]
Length = 766
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 100/176 (56%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++++ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 113 TSLTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 169
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ G P A +G + EI +P K GL+IG+GGET
Sbjct: 170 SVQKAKMMLDDIVSRGRGG--PPGQFHDSANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 225
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DG++ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 226 IKQLQERAGVKMILIQ------DGAQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 275
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P DS ++I +P K G++IGK G+TI+
Sbjct: 169 ESVQKAKMMLDDIVSRGRGGPPGQFHDSANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 228
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D A +P+ IIG + +A +++ ++ E D GG
Sbjct: 229 LQERAGVKMILIQDG-AQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 281
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 282 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 336
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 337 EKIAHIMGPPDRCEHAARIINDLL-QSLR 364
>gi|82697008|gb|AAI08415.1| Khsrp protein, partial [Mus musculus]
Length = 551
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 3 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 62
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 63 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 115
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 116 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 170
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 171 EKIAHIMGPPDRCEHAARIINDLL-QSLR 198
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 131 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 187
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 188 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 247
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 248 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 299
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 20/140 (14%)
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 4 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 59
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L + +
Sbjct: 60 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ- 112
Query: 374 STLSGGF-NQQAYRPRVPTG 392
GGF ++ Y RV G
Sbjct: 113 ----GGFGDRNEYGSRVGGG 128
>gi|194377024|dbj|BAG63073.1| unnamed protein product [Homo sapiens]
Length = 642
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 13/170 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 98 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 154
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 155 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 206
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 207 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 254
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 28/207 (13%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 154 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 208
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG
Sbjct: 209 QLQERAGVKMVMIQDGPQNT-GADKPLRITGDPYKVQQAKEMVLELIR--DQGG-----F 260
Query: 284 RGLATAQAS--GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
R + S G E +++ +P VG++IGR GE IK +Q +G RIQ P DG
Sbjct: 261 REVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DG 315
Query: 342 SK-ERIVRVTGDMRQIEIAQEMIKEVL 367
+ ERI ++TG + + A E+I ++L
Sbjct: 316 TTPERIAQITGPPDRCQHAAEIITDLL 342
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A ++
Sbjct: 281 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAAEI 337
Query: 266 INAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGGET 317
I ++ AG G + G ++ VP K GLIIG+GGET
Sbjct: 338 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGET 397
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
IK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 398 IKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 452
>gi|242022794|ref|XP_002431823.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
gi|212517155|gb|EEB19085.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
Length = 708
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 23/188 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI++LQ +GA++ + +D+++ + +P+ I GT +D A
Sbjct: 156 EIMIPGPKVGLVIGKGGETIKHLQDTTGARMVVVQDSNSQDY--EKPLRITGTQQQVDHA 213
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASG------------------AAEQVEIKVPN 304
+ L+ +IA+ D G + ++G +EI VP
Sbjct: 214 KDLVYQMIADKDVGSGDRRNRADRSHFNSAGPPSGPNNFSNEFDNNSQPGGGVIEILVPR 273
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
VG++IG+GGE IK +Q+ +GA++Q DG +R +TG Q E A+E +
Sbjct: 274 AAVGVVIGKGGEMIKKIQSSTGAKLQF---EQGRDDGPGDRKCILTGKPEQCEDAREKVI 330
Query: 365 EVLSQTVR 372
E++ R
Sbjct: 331 ELIDSVQR 338
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 23/190 (12%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
+++ S +I VP+ VG++IG+ G+ I LQ+ SG KIQ+ R R + G
Sbjct: 40 SNEGVFSEEIMVPDKIVGLIIGRGGEQITRLQFESGCKIQMERSRGT----VERQCTLTG 95
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----------------V 298
T I++A +++ +++ + G + +
Sbjct: 96 TREAINRAREMVMNIVSTLIRNENFGSGGSGNNNNNGNDSFSHPPFHQNQNSVPQGQAFA 155
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
EI +P KVGL+IG+GGETIK LQ +GAR+ ++ + E+ +R+TG +Q++
Sbjct: 156 EIMIPGPKVGLVIGKGGETIKHLQDTTGARMVVVQDSNSQ---DYEKPLRITGTQQQVDH 212
Query: 359 AQEMIKEVLS 368
A++++ ++++
Sbjct: 213 AKDLVYQMIA 222
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VGV+IGK G+ I+ +Q ++GAK+Q + D P R + G + A
Sbjct: 268 EILVPRAAVGVVIGKGGEMIKKIQSSTGAKLQFEQGRDDGP--GDRKCILTGKPEQCEDA 325
Query: 263 EK----LINAVIAEAD---------------------AGGSPSLVARG-LATAQASGAAE 296
+ LI++V D AG R ++
Sbjct: 326 REKVIELIDSVQRRDDRREPGRTGRNDRNDRDRRGQSAGDFDRQAGRNERWNSRDRSERN 385
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
++ VP + G +IG+GGE IK + + GA + I + L + + E++ + G QI
Sbjct: 386 EITFAVPANRAGFVIGKGGEKIKQINAQCGAYCE-IDRKLSSVNPA-EKVFVIRGTPEQI 443
Query: 357 EIAQEMIKE 365
E A+ +I E
Sbjct: 444 EEAKRLIIE 452
>gi|321477777|gb|EFX88735.1| hypothetical protein DAPPUDRAFT_311062 [Daphnia pulex]
Length = 727
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 24/172 (13%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
+ ++ VP+ VG++IG+ G+ I LQ SGAKIQ+ D+ P R I G+ I
Sbjct: 120 TEEVAVPDKMVGLIIGRGGEQISRLQAESGAKIQMAPDSAGLPD---RTCTITGSREAIG 176
Query: 261 KAEKLINAVIAEADA---GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+A +LIN ++ G PS+ + + +P KVGLIIG+GGET
Sbjct: 177 RARELINNIVQTRGGPRDAGPPSV---------------ESLVMIPGPKVGLIIGKGGET 221
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ RSG R+ ++ Q P+ + E+ +R+ GD +++E A++++ +++++
Sbjct: 222 IKQLQERSGTRM-VVVQDGPQQE--NEKPLRIYGDPQKVEHAKQLVYDLIAE 270
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 28/168 (16%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P KVG++IGK G+TI+ LQ SG ++ + +D + +P+ I G ++ A+
Sbjct: 204 VMIPGPKVGLIIGKGGETIKQLQERSGTRMVVVQDGPQQEN--EKPLRIYGDPQKVEHAK 261
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ +IAE +++E+ VP VG++IG+ GE IK +Q
Sbjct: 262 QLVYDLIAE-----------------------KEMEVAVPRSAVGVVIGKNGEMIKKIQN 298
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
+GAR+Q D +ER+ +TG M QIE A++ I+E++ +
Sbjct: 299 ETGARVQF---QQGRDDNPEERMCALTGTMNQIEDARQRIEELIESVL 343
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 49/209 (23%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VGV+IGK G+ I+ +Q +GA++Q + D +P R + GT++ I+ A
Sbjct: 274 EVAVPRSAVGVVIGKNGEMIKKIQNETGARVQFQQGRDDNPE--ERMCALTGTMNQIEDA 331
Query: 263 ----EKLINAVIAE-----------------ADAGGSP-------------------SLV 282
E+LI +V+A + G+P V
Sbjct: 332 RQRIEELIESVLARDSQMGRGRGRTGGSTGGSSMNGAPYGRSPGGGSSTGGGWGEYGPGV 391
Query: 283 AR--GLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPE 338
R G + A ++VE VP+ K G+IIG+GGETIK + +SGA +L + P
Sbjct: 392 GRSGGPSIGMARNGQDKVEYQFLVPSTKTGIIIGKGGETIKQINQQSGAFCELDRRPPPN 451
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E+I + G Q+E+A+ MI E L
Sbjct: 452 ---PNEKIFIIRGSHEQVELAKRMISEKL 477
>gi|156375798|ref|XP_001630266.1| predicted protein [Nematostella vectensis]
gi|156217283|gb|EDO38203.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT--RPVEIIGTLSNID 260
++ +P +KVG++IGK G+TI+ LQ + ++ + +D P+A +P+ I+G +
Sbjct: 251 EMMIPASKVGLIIGKGGETIKNLQERAQCRMVMVQDG---PYANAPEKPLRIMGDNTRCQ 307
Query: 261 KAEKLINAVIAEADAGGS-PSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ + L+ ++ E + S P+L G A +EI VP + VG +IG+GGETIK
Sbjct: 308 RGKDLVTDLLTEKELEQSKPALDFLGKRQDNRQLGATTLEIPVPRDVVGFVIGKGGETIK 367
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+Q SGAR+Q P + S +R+ V G QI+ +++I E++SQ
Sbjct: 368 RIQAESGARVQFNPAK--DNPNSSDRMATVQGSQEQIQKVEKIINEIISQV 416
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
+ +I VP + VG +IGK G+TI+ +Q SGA++Q D +P+++ R + G+ I
Sbjct: 345 TLEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKD-NPNSSDRMATVQGSQEQIQ 403
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
K EK+IN +I++ ++ RG A G +E+ VP K GLIIG+GGETIK
Sbjct: 404 KVEKIINEIISQVESRQRGGPPPRG-PPANMPGI-NTLEMPVPGNKCGLIIGKGGETIKQ 461
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+ SGA ++L +++PE + +K ++R G +QI+ A++MI E +S
Sbjct: 462 IIAVSGAHVEL-NRNVPENNPTKFFVIR--GTDQQIQQAEKMINEKIS 506
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 105/181 (58%), Gaps = 25/181 (13%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT-----RPVEI 252
S + ++++PN VG++IG+ G+ I LQ +GA+IQ+ DP A R V I
Sbjct: 155 SMTTEEVKIPNKYVGLVIGRGGEQINKLQSETGARIQVA----PDPPAGMMSPPDRSVTI 210
Query: 253 IGTLSNIDKAEKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQV-EIKVPNEKVG 308
GT+ ++KA++++N + E D+ S +VA G EQV E+ +P KVG
Sbjct: 211 GGTVQAVEKAKQVLNKICEEGKIPDSLMSVPVVAPG----------EQVIEMMIPASKVG 260
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
LIIG+GGETIK LQ R+ R+ ++ Q P + + E+ +R+ GD + + ++++ ++L+
Sbjct: 261 LIIGKGGETIKNLQERAQCRMVMV-QDGPYAN-APEKPLRIMGDNTRCQRGKDLVTDLLT 318
Query: 369 Q 369
+
Sbjct: 319 E 319
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 282 VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
VA +A G+ E+K+PN+ VGL+IGRGGE I LQ+ +GARIQ+ P P G
Sbjct: 143 VAASIAQRAGLGSMTTEEVKIPNKYVGLVIGRGGEQINKLQSETGARIQVAPDP-PAGMM 201
Query: 342 S-KERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTL 376
S +R V + G ++ +E A++++ ++ + P +L
Sbjct: 202 SPPDRSVTIGGTVQAVEKAKQVLNKICEEGKIPDSL 237
>gi|324512087|gb|ADY45016.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 515
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + IEVP++ VG++IG+ G+ I +Q S ++Q++ ++D + R
Sbjct: 24 PSGGAGDVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGN---NMRQCT 80
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ GT +++A+ +I VIA A P+ RG SG Q+ E+ +P K GL
Sbjct: 81 LQGTKMAVERAKSMIQDVIARAGNRPPPN---RGHFDGGMSGGGRQITHEMLIPGAKCGL 137
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I + + G + + +R+ G+ +++ A+ M++++L
Sbjct: 138 VIGKGGETIKNIQEQAGVKMVMIQE--TQESGGQPKPLRIIGEPDKVDTARRMVEDIL 193
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK---IQITRDADADPHAATRPVEIIGTL 256
++ ++ +P K G++IGK G+TI+ +Q +G K IQ T+++ P +P+ IIG
Sbjct: 124 ITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP----KPLRIIGEP 179
Query: 257 SNIDKAEKLINAVIAEAD-----AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+D A +++ ++ + G G G E+ VP VG+II
Sbjct: 180 DKVDTARRMVEDILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMII 239
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GGETIK L SGA+IQ P E + +R + G QI A + I E++
Sbjct: 240 GKGGETIKRLAAESGAKIQFKPD---EDQTTPDRCAVIQGTTEQIAKATQFISELIFYMH 296
Query: 372 RPSTLSG 378
P+ +G
Sbjct: 297 VPANKTG 303
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 32/162 (19%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA
Sbjct: 227 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKA 284
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ +I + VP K GL+IG+GGETIK +
Sbjct: 285 TQFISELI---------------------------FYMHVPANKTGLVIGKGGETIKQIC 317
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L + P S E++ + G QI AQ +I+
Sbjct: 318 AESGAHVELSREPPPN---SYEKVFIIKGTPYQIHHAQHIIR 356
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGL+IGRGGE I +Q++S R+Q+ PE DG+ R + G +E A
Sbjct: 36 IEVPDHCVGLVIGRGGEQISQIQSQSNCRVQM----SPESDGNNMRQCTLQGTKMAVERA 91
Query: 360 QEMIKEVLSQ 369
+ MI++V+++
Sbjct: 92 KSMIQDVIAR 101
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP NK G++IGK G+TI+ + SGA ++++R + P++ + I GT I A+
Sbjct: 295 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--EPPPNSYEKVFIIKGTPYQIHHAQ 352
Query: 264 KLINAVIAEADAG 276
+I + + G
Sbjct: 353 HIIRIKVGDISPG 365
>gi|345320294|ref|XP_001520726.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2-like, partial [Ornithorhynchus anatinus]
Length = 652
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 120 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 179
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 180 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDHYKVQQACEMVMDILRERDQGGF------ 232
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 233 GERNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 287
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 288 EKIAHIMGPPDRCEHAARIINDLL-QSLR 315
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 248 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 304
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 305 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 364
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 365 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 416
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 19/174 (10%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S ++VP+ G+ D ++ Q +SG K+QI+ R V + G ++
Sbjct: 68 FSLSLKVPSXHRGLAEEGGTDQLKSRQ-DSGCKVQISPSGGL----PERSVSLTGAPESV 122
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGETIK
Sbjct: 123 QKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETIK 178
Query: 320 GLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 179 QLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDHYKVQQACEMVMDILRE 226
>gi|410917265|ref|XP_003972107.1| PREDICTED: far upstream element-binding protein 2-like [Takifugu
rubripes]
Length = 635
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 26/176 (14%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ + VP+ VG++IG+ G+ I +Q SG K+Q D P R V + G
Sbjct: 99 SALTEECSVPDAMVGLIIGRGGEQINKIQQESGCKVQFAHDTAGLPE---RRVSLTGPPD 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
I +A+ LI+ +V+RG + + E+ +P K GLIIGRGGET
Sbjct: 156 AIQRAKALID------------DIVSRGHESPNGQPGSMH-EMIIPAGKAGLIIGRGGET 202
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A+EM+ E+L +
Sbjct: 203 IKQLQERAGVKMILIQ------DGSQPPNIDKPLRIIGDPYKVQQAKEMVNEILRE 252
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P K G++IG+ G+TI+ LQ +G K+ + +D P+ +P+ IIG + +A+++
Sbjct: 187 IPAGKAGLIIGRGGETIKQLQERAGVKMILIQDGSQPPNI-DKPLRIIGDPYKVQQAKEM 245
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+N ++ E D G G + G + I VP VG++IGR GE IK +Q+ +
Sbjct: 246 VNEILRERDHAGFGERTEYG-SRMGGGGGGNGINIAVPRHSVGVVIGRNGEMIKKIQSDA 304
Query: 326 GARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
G +IQ P DG+ E++ + G + E A +I ++L Q+VR
Sbjct: 305 GVKIQFKPD-----DGTGPEKMALIMGPPDRCEHAASIITDLL-QSVR 346
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP + VGV+IG+ G+ I+ +Q ++G KIQ D P + I+G + A +
Sbjct: 281 VPRHSVGVVIGRNGEMIKKIQSDAGVKIQFKPDDGTGPE---KMALIMGPPDRCEHAASI 337
Query: 266 INAVIAEADA----------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
I ++ A G ++ VP K GL+IGRGG
Sbjct: 338 ITDLLQSVRAREEGGQGPPGAGPGMPSGGQGHGRGQGSWGGEMAFSVPAHKCGLVIGRGG 397
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
E +K + ++GA +++ Q P GD ++ + G +QI+ A+++I+E +
Sbjct: 398 ENVKSINQQTGAFVKMTHQPPPNGD-PNFKLFTIRGTPQQIDHAKQLIEEKI 448
>gi|449676986|ref|XP_002155841.2| PREDICTED: uncharacterized protein LOC100213921 [Hydra
magnipapillata]
Length = 643
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + + +PN VG++IG+ G+ I LQ +SGAKIQ+ D + R + I G+
Sbjct: 31 SMLVEDVSIPNKLVGLVIGRGGEMINRLQSDSGAKIQVAPDPPPNMMDIDRQITITGSSE 90
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ KA++LI + E G P R + A G +E+K+ KVGL+IG+GGET
Sbjct: 91 AVSKAKQLIEQIRNE---GKVPE---RLMLAANLPGEFS-IEMKIAAGKVGLVIGKGGET 143
Query: 318 IKGLQTRSGARIQLIPQHLPEGDG----SKERIVRVTGDMRQIEIAQEMIKE-VLSQTVR 372
IK LQ R+G ++ L DG + E+ ++++G+ ++ ++++++ ++S+ +
Sbjct: 144 IKSLQERAGCKMILFQ------DGEYAQAAEKPLKISGEQSKVLYGKQLVQDLIVSKEIE 197
Query: 373 PSTLSG-GFNQQAYRPRVPTGPP 394
S FNQ Y + + P
Sbjct: 198 ADKTSCYIFNQSPYTSDITSMVP 220
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S ++++ KVG++IGK G+TI+ LQ +G K+ + +D + AA +P++I G S +
Sbjct: 122 FSIEMKIAAGKVGLVIGKGGETIKSLQERAGCKMILFQDGEY-AQAAEKPLKISGEQSKV 180
Query: 260 DKAEKLINAVIA----EADAGGSPSLVARGLATAQAS------GAAEQV---EIKVPNEK 306
++L+ +I EAD S + + T+ + G +QV EI+VP E
Sbjct: 181 LYGKQLVQDLIVSKEIEADKT-SCYIFNQSPYTSDITSMVPNPGDPDQVGYEEIQVPREA 239
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VG IIG G I +Q +G RIQ ++ EG+ + + G+ + I + +E + E+
Sbjct: 240 VGFIIGSKGANINNIQQMTGCRIQF--KNEMEGE---FKTATLQGNPQAIVMGREKLLEI 294
Query: 367 L-SQTVRPSTLSGGFNQQAYRPR-VPTGPPQW 396
L + R + G F ++ RP + T P W
Sbjct: 295 LQAYQDRVNGTGGTFQWRSPRPIGMTTARPGW 326
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 282 VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
VA L G+ ++ +PN+ VGL+IGRGGE I LQ+ SGA+IQ+ P P
Sbjct: 19 VANSLVQRAGIGSMLVEDVSIPNKLVGLVIGRGGEMINRLQSDSGAKIQVAPDP-PPNMM 77
Query: 342 SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTL 376
+R + +TG + A+++I+++ ++ P L
Sbjct: 78 DIDRQITITGSSEAVSKAKQLIEQIRNEGKVPERL 112
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA-DADPHAATRPVEIIGTLSNIDK 261
+I+VP NK G++IGK G+T++Y+ +G I+I R+ D+ P R + GT I K
Sbjct: 382 EIDVPANKCGLIIGKGGETLKYMHTETGINIEIKRNVPDSSPF---RTFNLRGTDEQISK 438
Query: 262 AEKLINAVIAEADAGGSPS 280
AE I + + P+
Sbjct: 439 AETFIREKVGDQSLTAKPA 457
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
+ +EI VP K GLIIG+GGET+K + T +G I+ I +++P D S R + G Q
Sbjct: 379 KHMEIDVPANKCGLIIGKGGETLKYMHTETGINIE-IKRNVP--DSSPFRTFNLRGTDEQ 435
Query: 356 IEIAQEMIKEVL---SQTVRPST 375
I A+ I+E + S T +P++
Sbjct: 436 ISKAETFIREKVGDQSLTAKPAS 458
>gi|296420788|ref|XP_002839950.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636158|emb|CAZ84141.1| unnamed protein product [Tuber melanosporum]
Length = 574
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR +Q SG + I +A RPV +IG+
Sbjct: 312 DGEDSIQILVPDRTVGLIIGRGGETIRDIQDKSGCHVNIV--GEAKSQNGQRPVNLIGSP 369
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ A++LI ++ +AG P G+ T I+VP + VG+IIG+GGE
Sbjct: 370 QAAEDAKRLIMEIVESDNAGTGPPP---GILTET---------IRVPIDAVGMIIGKGGE 417
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
TIK +Q+ +G RI + Q G ER + + G I A+ I+E + + R
Sbjct: 418 TIKDMQSSTGCRINVSSQFQ---QGDPEREIALAGTREAIARARIAIEEKVEASTR 470
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ + ++ VG++IG+ G+T+R ++ +GA++Q + R I GT I A
Sbjct: 211 QMNIESSLVGLIIGRGGETLRRVEQETGARVQFLTNGQDRDSGGERVCNIQGTRPQISAA 270
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAA-----------EQVEIKVPNEKVGLII 311
+ I +IAE G G + + + ++I VP+ VGLII
Sbjct: 271 RRAIEQIIAENGPPGGGMAGPSGSTSGRGKFGGSGGQPNLRDGEDSIQILVPDRTVGLII 330
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GRGGETI+ +Q +SG + ++ + + + +R V + G + E A+ +I E++
Sbjct: 331 GRGGETIRDIQDKSGCHVNIVGEAKSQ---NGQRPVNLIGSPQAAEDAKRLIMEIV 383
>gi|328768071|gb|EGF78118.1| hypothetical protein BATDEDRAFT_90775 [Batrachochytrium
dendrobatidis JAM81]
Length = 604
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 29/195 (14%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE----IIGTLSNI 259
+ VP K G++IG+ G+T++ ++ G +IQ+ +P + +E I G L I
Sbjct: 166 VVVPPGKAGIVIGRGGETLKGIERQFGVRIQL------EPSGPSGDIEKSAIITGGLQEI 219
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQAS-------GAAEQVEIKVPNEKVGLIIG 312
+ A K + +I G+P G A+ G ++VP VGL+IG
Sbjct: 220 EAASKAVQEII-----NGTPRTGGNGAYGQSAAPYGATPYGGGITAHVQVPQAHVGLVIG 274
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL--SQT 370
+GGETIK LQ RSGARI + + E G+ RIV + G+ + AQ M+ E++ Q
Sbjct: 275 KGGETIKSLQQRSGARITVAKETETE-PGATTRIVTIYGNEHAVATAQHMVNEIIQHQQF 333
Query: 371 VRPSTLS----GGFN 381
R T GGFN
Sbjct: 334 QRQVTTYGPPPGGFN 348
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ ++VP VG++IGK G+TI+ LQ SGA+I + ++ + +P A TR V I G +
Sbjct: 258 ITAHVQVPQAHVGLVIGKGGETIKSLQQRSGARITVAKETETEPGATTRIVTIYGNEHAV 317
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE-IKVPNEKVGLIIGRGGETI 318
A+ ++N +I + G + + E + V KVGL+IGRGGETI
Sbjct: 318 ATAQHMVNEIIQHQQF--QRQVTTYGPPPGGFNNYGQYCEVVMVSATKVGLVIGRGGETI 375
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K +Q G +++ P D + ER V V G + A+E + E
Sbjct: 376 KSIQGEYGVTLKVDPNT----DANGERRVAVYGQPDAVARAKEAVYE 418
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
+++ + VP K G++IGRGGET+KG++ + G RIQL P P GD K I +TG +++
Sbjct: 162 QKIVVVVPPGKAGIVIGRGGETLKGIERQFGVRIQLEPSG-PSGDIEKSAI--ITGGLQE 218
Query: 356 IEIAQEMIKEVLSQTVR 372
IE A + ++E+++ T R
Sbjct: 219 IEAASKAVQEIINGTPR 235
>gi|195999114|ref|XP_002109425.1| hypothetical protein TRIADDRAFT_53440 [Trichoplax adhaerens]
gi|190587549|gb|EDV27591.1| hypothetical protein TRIADDRAFT_53440 [Trichoplax adhaerens]
Length = 634
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 9/158 (5%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+S + +I++PN G++IGK GD+I LQ SGAKIQ+ DADA R V I G+
Sbjct: 108 NSIVVEEIKIPNKMTGLVIGKGGDSINKLQAESGAKIQVQPDADAQGKPE-RIVTITGSA 166
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
N+D+A+ LI+ ++ E A + G + E EI VP KVGL+IG+GGE
Sbjct: 167 VNVDQAKYLIDQMVNEGPAAMPGNAAPLGAIPPAQNEITE--EILVPANKVGLVIGKGGE 224
Query: 317 TIKGLQTRSGARIQLIPQ--HLPEGDGSKERIVRVTGD 352
I+ Q R+ R+ ++ + H+ +++ +R+ GD
Sbjct: 225 MIRSFQERTQTRMVMVQESSHIT----GRDKPLRIGGD 258
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
EIK+PN+ GL+IG+GG++I LQ SGA+IQ+ P + G ERIV +TG ++
Sbjct: 114 EIKIPNKMTGLVIGKGGDSINKLQAESGAKIQVQPD--ADAQGKPERIVTITGSAVNVDQ 171
Query: 359 AQEMIKEVLSQ 369
A+ +I +++++
Sbjct: 172 AKYLIDQMVNE 182
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 164 EETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
++ V E + P N P + ++++ ++ +I VP NKVG++IGK G+ IR
Sbjct: 177 DQMVNEGPAAMPGNAAPLGAIPPAQNE---------ITEEILVPANKVGLVIGKGGEMIR 227
Query: 224 YLQYNSGAKIQITRDADADPHAATR--PVEIIGTLSNIDKAEKLINAVIAEADAGGSPSL 281
Q + ++ + +++ H R P+ I G + + + + G+P
Sbjct: 228 SFQERTQTRMVMVQESS---HITGRDKPLRIGGDPQRVKPMKPGGDFRNQSTNDYGTP-- 282
Query: 282 VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
+ G +E+ VP + VG++IGRGGETIK +Q +G +IQ P
Sbjct: 283 ------VHKQMGGMGMLEVPVPRDVVGVVIGRGGETIKRIQMETGTKIQFKEDSNPN--- 333
Query: 342 SKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+RI +TG+ ++ A +MI +++ + R
Sbjct: 334 LPDRIAMLTGNDDSVQRANKMISDLIMEKRR 364
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 99/166 (59%), Gaps = 7/166 (4%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP+ VG++IG+ G+ I LQ +G KIQ+ ++ T + G+ +++A+
Sbjct: 110 IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGLPERVCT----LTGSREAVNRAK 165
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+L+ +++ + + ++ G VEI +P KVGLIIG+GGETIK LQ
Sbjct: 166 ELVLSIVNQRSRTEGIGDMNMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQE 225
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+SGA++ +I Q P + +E+ +R+TGD +++E A++++ E++++
Sbjct: 226 KSGAKMVVI-QEGPSQE--QEKPLRITGDPQKVEYAKQLVYELIAE 268
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 40/234 (17%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + ++ + +P+ I G ++ A
Sbjct: 201 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQE--KPLRITGDPQKVEYA 258
Query: 263 EKLINAVIAEADAGGSPSLVARGL-------------ATAQASGAAEQVEIKVPNEKVGL 309
++L+ +IAE + + RG + SG + VE+ VP VG+
Sbjct: 259 KQLVYELIAEKEM----QMFHRGARGNDRSGSYSNDSSFNHGSGTTDGVEVLVPRAAVGV 314
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IG+GG+ IK +Q +GAR+Q Q E DG +R ++G + +E ++ I+E++
Sbjct: 315 VIGKGGDMIKKIQAETGARVQF--QQGRE-DGPGDRKCILSGKHQAVEQVRQRIQELIDS 371
Query: 370 TVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGS------HPSQPMAYDYPQRGPY 417
+R R P G + GPRG+ +P++ +D Q GP
Sbjct: 372 VMRRDD-----------GRSPMG-TRSGPRGNGFGNNRNPNEYGGWDRRQGGPM 413
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 41/252 (16%)
Query: 187 SKSDDPSSTDDSTMSRKIEV--PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
S S+D S S + +EV P VGV+IGK GD I+ +Q +GA++Q + + P
Sbjct: 286 SYSNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGP- 344
Query: 245 AATRPVEIIGTLSNID----KAEKLINAVIAEADAGGSPSLVAR---------------- 284
R + G ++ + ++LI++V+ D G SP + R
Sbjct: 345 -GDRKCILSGKHQAVEQVRQRIQELIDSVMRRDD-GRSP-MGTRSGPRGNGFGNNRNPNE 401
Query: 285 --GLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD 340
G Q +++E VP+ K G+IIG+GGETIK + ++GA +L ++
Sbjct: 402 YGGWDRRQGGPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSN-- 459
Query: 341 GSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPP--QWGP 398
E+I + G+ Q+E A+ + E L ++ SG Y P G W
Sbjct: 460 -ENEKIFIIRGNPEQVEHAKRIFSEKLGMAPANTSFSGTQGAIGYNPTWNAGTAYQAW-- 516
Query: 399 RGSHPSQPMAYD 410
PSQP D
Sbjct: 517 ----PSQPQTTD 524
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I+VP++ VGLIIGRGGE I LQ+ +G +IQ+ P+ G ER+ +TG +
Sbjct: 109 DIRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPE-----SGLPERVCTLTGSREAVNR 163
Query: 359 AQEMIKEVLSQTVR 372
A+E++ +++Q R
Sbjct: 164 AKELVLSIVNQRSR 177
>gi|452989996|gb|EME89751.1| hypothetical protein MYCFIDRAFT_78468 [Pseudocercospora fijiensis
CIRAD86]
Length = 487
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 18/196 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I V + VG++IG+ G+ +R ++ +GA++Q + D+ H A R I G+ + + A+
Sbjct: 145 IRVKSGLVGLIIGRNGENLRKVESETGARVQFIQAKDS--HVAERQCTISGSTRSREAAK 202
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE-----------QVEIKVPNEKVGLIIG 312
I +I D GG+P+ +G T G A+ +I VP++ VGLIIG
Sbjct: 203 AAIFQIIE--DNGGTPAAQEKGAYTPGMPGRAKVNLPALREGEASTQIMVPDKTVGLIIG 260
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
RGGETIK LQ RSG + ++ ++ + R V + G R +A+E+I E++ R
Sbjct: 261 RGGETIKDLQERSGCHVNIVGENKSV---NGLRPVNLIGSERATAVAKELILEIVESDSR 317
Query: 373 PSTLSGGFNQQAYRPR 388
+ G + R R
Sbjct: 318 GQSGGGANATASMRDR 333
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 31/195 (15%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TI+ LQ SG + I + RPV +IG+
Sbjct: 245 STQIMVPDKTVGLIIGRGGETIKDLQERSGCHVNIV--GENKSVNGLRPVNLIGSERATA 302
Query: 261 KAEKLINAVIAEADAGG--------SPSLVARGLATAQASG-------------AAEQVE 299
A++LI ++ E+D+ G + S+ RG Q G + +E
Sbjct: 303 VAKELILEIV-ESDSRGQSGGGANATASMRDRGYDNHQGQGNHARNGGGGGRGGGGDVIE 361
Query: 300 --IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
I+VP+E VG+IIG+GGETIK +Q SG +I + P+ R + + G R +E
Sbjct: 362 KTIRVPSEAVGMIIGKGGETIKDMQRTSGCKINVNQPKPPD----VTRAIDLAGSARAME 417
Query: 358 IAQEMIKEVLSQTVR 372
A+ +I E + +TVR
Sbjct: 418 EAERIIWEKV-ETVR 431
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+ + I VP+ VG++IGK G+TI+ +Q SG KI + + P TR +++ G+
Sbjct: 359 VIEKTIRVPSEAVGMIIGKGGETIKDMQRTSGCKINVNQ---PKPPDVTRAIDLAGSARA 415
Query: 259 IDKAEKLI 266
+++AE++I
Sbjct: 416 MEEAERII 423
>gi|308813628|ref|XP_003084120.1| circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS)
[Ostreococcus tauri]
gi|116056003|emb|CAL58536.1| circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS)
[Ostreococcus tauri]
Length = 393
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 24/170 (14%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD-ADADPHAATRPVEIIGTLSN 258
++R +E P + VG +IG+ G+TI+ LQ SGA + I + AD +P + V I GT +
Sbjct: 131 VTRSLECPQSMVGRIIGRGGETIKSLQATSGAHVAIDQSGADGEP----KRVTISGTRKS 186
Query: 259 IDKAEKLI-NAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+D A +L+ N ++ GG LV G T I+ P E+VG IIGRGGET
Sbjct: 187 VDAASELVENLLLGTGAMGGM--LVIPGQITR---------SIECPKERVGKIIGRGGET 235
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
I+G+Q +GAR+Q+ P +V + G ++ +++ E+L
Sbjct: 236 IRGIQAATGARLQIDQTRQPC-------VVMMAGAEACVDACTQVVNEIL 278
>gi|70569718|dbj|BAE06463.1| Ci-FUSE [Ciona intestinalis]
Length = 200
Score = 86.3 bits (212), Expect = 6e-14, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
+ S S D D MS I +P++ VG++IG+ G+ I +Q +G +IQIT+ P
Sbjct: 26 ETSYSSDVCCKQD-IMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSI---PG 81
Query: 245 AATRPVEIIGTLSNIDKAEKLINAVIAEADAG--GSPSLVARGLATAQASGAAEQ-VEIK 301
RP + GT I+ ++N +I+ + AG GS +++G G E+ +EI
Sbjct: 82 TKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEIA 141
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
VP +K GLIIG+GGETIK LQ G ++ LI SK +R+TG +++
Sbjct: 142 VPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKP--LRITGPQLNVDV 196
Score = 67.0 bits (162), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I++P++ VGLIIGRGGE I +Q +G RIQ I Q +P G+KER ++G QIE+
Sbjct: 44 IRLPDDLVGLIIGRGGENIMRMQRETGCRIQ-ITQSIP---GTKERPCTLSGTQEQIEVC 99
Query: 360 QEMIKEVLSQTVRPSTLSGGFN 381
+ M+ E++S++ + TL FN
Sbjct: 100 RNMLNEIISRS-QAGTLGSNFN 120
>gi|344237643|gb|EGV93746.1| Far upstream element-binding protein 2 [Cricetulus griseus]
Length = 593
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 45 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 104
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 105 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 157
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 158 GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 212
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 213 EKIAHIMGPPDRCEHAARIINDLL-QSLR 240
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 23/187 (12%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G ++ KA+ +++ ++
Sbjct: 2 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPESVQKAKMMLDDIV 58
Query: 271 AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
+ GG P A +G + EI +P K GL+IG+GGETIK LQ R+G ++
Sbjct: 59 SRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGETIKQLQERAGVKMI 114
Query: 331 LIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF-NQQAY 385
LI DGS+ ++ +R+ GD +++ A EM+ ++L + + GGF ++ Y
Sbjct: 115 LIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQ-----GGFGDRNEY 163
Query: 386 RPRVPTG 392
RV G
Sbjct: 164 GSRVGGG 170
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 173 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 229
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 230 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 289
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 290 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 341
>gi|154287628|ref|XP_001544609.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408250|gb|EDN03791.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 634
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S DD+ + I V ++ VG++IG+ G+++R ++ ++G +IQ +ADP ++ R +
Sbjct: 253 PGSMDDNVET--ISVESSLVGLIIGRQGESLRRIESDTGTRIQFL--DNADPSSSVRLCK 308
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG-----LATAQASGAAEQ-VEIKVPNE 305
I G+ + I +I+E A S + R AT+Q++ E V I VP+
Sbjct: 309 ITGSRVARGDVKAEITRIISETSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDR 368
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G E A+ +I E
Sbjct: 369 TVGLIIGRGGETIRDLQERSGCHVNIVNEN---KSINGLRPVNLIGSPDATERAKNLILE 425
Query: 366 VLSQTVR 372
++ R
Sbjct: 426 IVESDTR 432
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 151 DVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNK 210
DVK E + + + + P ++ P K+ S+ DD R I VP+
Sbjct: 318 DVKAEITRIISETSASRSGTRTDRPGHMPP-------KATSQSAQDDEDAVR-IMVPDRT 369
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG++IG+ G+TIR LQ SG + I + + RPV +IG+ ++A+ LI ++
Sbjct: 370 VGLIIGRGGETIRDLQERSGCHVNIVNENKS--INGLRPVNLIGSPDATERAKNLILEIV 427
Query: 271 AEADAG--GSPS----LVARGLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQ 322
E+D +P+ A G E++ + +P + VG+IIG+GG+TIK +Q
Sbjct: 428 -ESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDMMFIPPDAVGMIIGKGGDTIKEMQ 486
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+G RI + P G + +R V + G IE A+ MI E +
Sbjct: 487 AVTGCRINI---QSPVGRDA-DREVTLVGSRGAIEEAKRMIMEKI 527
>gi|119194253|ref|XP_001247730.1| hypothetical protein CIMG_01501 [Coccidioides immitis RS]
gi|392863028|gb|EAS36276.2| hypothetical protein CIMG_01501 [Coccidioides immitis RS]
Length = 558
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 50/240 (20%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
DDST + I + + VG++IG+ GD +R ++ ++G +IQ +++ + RP I G
Sbjct: 188 MDDSTET--INIDSKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPESNVN--IRPCRISG 243
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----------------- 297
T + A+ I +I+E +A ARG A A A A +
Sbjct: 244 TRAARSDAKAEIFRMISENNA-------ARG-AMASADRFASRGPHEPPGRQPGYGEDEN 295
Query: 298 --VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++ VP+ VGLIIGRGGETIK LQ RSG + + P+ + + R V + G R
Sbjct: 296 SSTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPE---DKSLNGLRPVNLNGAPRA 352
Query: 356 IEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG 415
I+ A+++I EV+ R GG PPQ PRG P + P+RG
Sbjct: 353 IQRAKDLILEVVETDSR----QGG------------APPQREPRGYAPERDTGAPAPERG 396
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 17/182 (9%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D S ++ VP+ VG++IG+ G+TI+ LQ SG + I + + RPV + G
Sbjct: 292 EDENSSTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKS--LNGLRPVNLNGA 349
Query: 256 LSNIDKAEKLINAVIAEADA---GGSPSLVARGLATAQASGAAE----QVEIKVPNEKVG 308
I +A+ LI V+ E D+ G P RG A + +GA I +P E VG
Sbjct: 350 PRAIQRAKDLILEVV-ETDSRQGGAPPQREPRGYAPERDTGAPAPERGDDSIFIPKESVG 408
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+IIG+GG+TIK LQ +G ++ ++P E D R V + G + IE +M K +L
Sbjct: 409 MIIGKGGDTIKELQNITGCKVNILPAVGREVD----REVVMIGSKQAIE---QMKKSILE 461
Query: 369 QT 370
+
Sbjct: 462 KV 463
>gi|240276217|gb|EER39729.1| KH domain-containing protein [Ajellomyces capsulatus H143]
Length = 551
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S DD+ + I V ++ VG++IG+ G+++R ++ ++G +IQ +ADP ++ R +
Sbjct: 170 PGSMDDNVET--ISVESSLVGLIIGRQGESLRRIESDTGTRIQFL--DNADPSSSVRLCK 225
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG-----LATAQASGAAEQ-VEIKVPNE 305
I G+ + I +I+E+ A S + R AT+Q++ E V I VP+
Sbjct: 226 ITGSRVARGDVKAEITRIISESSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDR 285
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G E A+ +I E
Sbjct: 286 TVGLIIGRGGETIRDLQERSGCHVNIVNEN---KSINGLRPVNLIGSPDATERAKNLILE 342
Query: 366 VLSQTVR 372
++ R
Sbjct: 343 IVESDTR 349
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 151 DVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNK 210
DVK E + + + + P ++ P K+ S+ DD R I VP+
Sbjct: 235 DVKAEITRIISESSASRSGTRTDRPGHMPP-------KATSQSAQDDEDAVR-IMVPDRT 286
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG++IG+ G+TIR LQ SG + I + + RPV +IG+ ++A+ LI ++
Sbjct: 287 VGLIIGRGGETIRDLQERSGCHVNIVNENKS--INGLRPVNLIGSPDATERAKNLILEIV 344
Query: 271 AEADAG--GSPS----LVARGLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQ 322
E+D +P+ A G E++ + +P + VG+IIG+GG+TIK +Q
Sbjct: 345 -ESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDMMFIPPDAVGMIIGKGGDTIKEMQ 403
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+G RI + P G + +R V + G IE A+ MI E +
Sbjct: 404 AVTGCRINI---QSPVGRDA-DREVTLVGSRAAIEEAKRMIMEKI 444
>gi|225559888|gb|EEH08170.1| KH domain-containing protein [Ajellomyces capsulatus G186AR]
gi|225559938|gb|EEH08220.1| KH domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 551
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S DD+ + I V ++ VG++IG+ G+++R ++ ++G +IQ +ADP ++ R +
Sbjct: 170 PGSMDDNVET--ISVESSLVGLIIGRQGESLRRIESDTGTRIQFL--DNADPSSSVRLCK 225
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG-----LATAQASGAAEQ-VEIKVPNE 305
I G+ + I +I+E+ A S + R AT+Q++ E V I VP+
Sbjct: 226 ITGSRVARGDVKAEITRIISESSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDR 285
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G E A+ +I E
Sbjct: 286 TVGLIIGRGGETIRDLQERSGCHVNIVNEN---KSINGLRPVNLIGSPDATERAKNLILE 342
Query: 366 VLSQTVR 372
++ R
Sbjct: 343 IVESDTR 349
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 151 DVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNK 210
DVK E + + + + P ++ P K+ S+ DD R I VP+
Sbjct: 235 DVKAEITRIISESSASRSGTRTDRPGHMPP-------KATSQSAQDDEDAVR-IMVPDRT 286
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG++IG+ G+TIR LQ SG + I + + RPV +IG+ ++A+ LI ++
Sbjct: 287 VGLIIGRGGETIRDLQERSGCHVNIVNENKS--INGLRPVNLIGSPDATERAKNLILEIV 344
Query: 271 AEADAG--GSPS----LVARGLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQ 322
E+D +P+ A G E++ + +P + VG+IIG+GG+TIK +Q
Sbjct: 345 -ESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDMMFIPPDAVGMIIGKGGDTIKEMQ 403
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+G RI + P G + +R V + G IE A+ MI E +
Sbjct: 404 AVTGCRINI---QSPVGRDA-DREVTLVGSRGAIEEAKRMIMEKI 444
>gi|325089918|gb|EGC43228.1| KH domain-containing protein [Ajellomyces capsulatus H88]
Length = 551
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P S DD+ + I V ++ VG++IG+ G+++R ++ ++G +IQ +ADP ++ R +
Sbjct: 170 PGSMDDNVET--ISVESSLVGLIIGRQGESLRRIESDTGTRIQFL--DNADPSSSVRLCK 225
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG-----LATAQASGAAEQ-VEIKVPNE 305
I G+ + I +I+E+ A S + R AT+Q++ E V I VP+
Sbjct: 226 ITGSRVARGDVKAEITRIISESSASRSGTRTDRPGHMPPKATSQSAQDDEDAVRIMVPDR 285
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G E A+ +I E
Sbjct: 286 TVGLIIGRGGETIRDLQERSGCHVNIVNEN---KSINGLRPVNLIGSPDATERAKNLILE 342
Query: 366 VLSQTVR 372
++ R
Sbjct: 343 IVESDTR 349
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 23/225 (10%)
Query: 151 DVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNK 210
DVK E + + + + P ++ P K+ S+ DD R I VP+
Sbjct: 235 DVKAEITRIISESSASRSGTRTDRPGHMPP-------KATSQSAQDDEDAVR-IMVPDRT 286
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG++IG+ G+TIR LQ SG + I + + RPV +IG+ ++A+ LI ++
Sbjct: 287 VGLIIGRGGETIRDLQERSGCHVNIVNENKS--INGLRPVNLIGSPDATERAKNLILEIV 344
Query: 271 AEADAG--GSPS----LVARGLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQ 322
E+D +P+ A G E++ + +P + VG+IIG+GG+TIK +Q
Sbjct: 345 -ESDTRQLANPTQREPRAAYGGDQPGGGPGGEKINDMMFIPPDAVGMIIGKGGDTIKEMQ 403
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+G RI + P G + +R V + G IE A+ MI E +
Sbjct: 404 AVTGCRINI---QSPVGRDA-DREVTLVGSRGAIEEAKRMIMEKI 444
>gi|90076756|dbj|BAE88058.1| unnamed protein product [Macaca fascicularis]
Length = 536
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 13/157 (8%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
G +IG+ G+ I +Q SG KIQI D+ P R + GT ++ A++L++ ++
Sbjct: 4 FGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPESVQSAKRLLDQIV 60
Query: 271 AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
+ G P A G G A Q EI +P K GL+IG+GGETIK LQ R+G ++
Sbjct: 61 EK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGETIKQLQERAGVKMV 112
Query: 331 LIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 113 MI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 147
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 47 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 101
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 102 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 158
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 159 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 210
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 211 PERIAQITGPPDRCQHAAEIITDLL 235
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 172 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 228
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 229 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 288
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 289 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 345
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
E G IIGRGGE I +Q SG +IQ+ P+ G ER +TG ++ A+ ++
Sbjct: 2 EWFGFIIGRGGEQISRIQQESGCKIQI----APDSGGLPERSCMLTGTPESVQSAKRLLD 57
Query: 365 EVLSQ 369
+++ +
Sbjct: 58 QIVEK 62
>gi|194882397|ref|XP_001975298.1| GG22239 [Drosophila erecta]
gi|190658485|gb|EDV55698.1| GG22239 [Drosophila erecta]
Length = 801
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 17/174 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G+A DTI ++Q SGAK+Q+ +D D R + + G
Sbjct: 120 TSCEEQIRLPESVAGAFMGRASNDTITHIQAESGAKVQVMQDQD-------RVIMLRGQR 172
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 173 DTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 232
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVL 367
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ +++
Sbjct: 233 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLI 280
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT ++
Sbjct: 317 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVE 374
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 375 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 434
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 435 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 488
Query: 361 EMIKEVLS 368
+MI E ++
Sbjct: 489 QMISEKIN 496
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 214 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 271
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G E VE+ VP VG++I
Sbjct: 272 AKQMVLDLIAQKDAQAQQQGGRGGGGGGGGPGMGFNNFNNGNGGESVEVFVPKIAVGVVI 331
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I ++ +
Sbjct: 332 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTIDGLIENVM 388
Query: 372 R 372
+
Sbjct: 389 Q 389
>gi|453088436|gb|EMF16476.1| eukaryotic type KH-domain (KH-domain type I) [Mycosphaerella
populorum SO2202]
Length = 559
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 18/188 (9%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
D+ T + I V + VG++IG+ G+ +R ++ SGA++Q + D+ H A R I G+
Sbjct: 171 DNGTEAETIRVKSGLVGLIIGRNGENLRKVEAESGARVQFVQAKDS--HVAERQCTITGS 228
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE-----------QVEIKVPN 304
+ + A+ I +I E GG+P +G T G A+ ++ VP+
Sbjct: 229 QRSREAAKNAIFQIIEEN--GGTPVAQEKGAYTPGMPGRAKVNLPALRDGEASTQLMVPD 286
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ VGLIIGRGGETIK LQ +SG + ++ ++ + R + + G R A+E+I
Sbjct: 287 KTVGLIIGRGGETIKDLQEKSGCHVNIVGEN---KSVNGFRPINLIGSERATATARELIL 343
Query: 365 EVLSQTVR 372
+++ R
Sbjct: 344 DIVESDSR 351
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 21/189 (11%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S ++ VP+ VG++IG+ G+TI+ LQ SG + I + RP+ +IG+
Sbjct: 275 DGEASTQLMVPDKTVGLIIGRGGETIKDLQEKSGCHVNIV--GENKSVNGFRPINLIGSE 332
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ-----------ASGAAEQVE--IKVP 303
A +LI ++ E+D+ + S +R Q G A+ E I+VP
Sbjct: 333 RATATARELILDIV-ESDSRNASSGPSRDRGFEQNPRNGGGGGRGGLGGADHFEKTIRVP 391
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+E VG+IIG+GGETIK +Q SG +I + P+ ER + + GD R +E A+ +I
Sbjct: 392 SEAVGMIIGKGGETIKDMQRTSGCKINVNQPQPPD----VERSIDLAGDARSMEAAERII 447
Query: 364 KEVLSQTVR 372
E + +TVR
Sbjct: 448 WEKV-ETVR 455
>gi|308489141|ref|XP_003106764.1| hypothetical protein CRE_16715 [Caenorhabditis remanei]
gi|308253418|gb|EFO97370.1| hypothetical protein CRE_16715 [Caenorhabditis remanei]
Length = 751
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 10/183 (5%)
Query: 191 DPSSTDDSTMSRKIE--VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATR 248
DP D + + E +P VG++IG+ G I + SG ++Q+T + + R
Sbjct: 50 DPQGMDHRSTVIRSEYPIPEQCVGLVIGRNGSEIHSISQRSGCRVQVTTEPT---NTGYR 106
Query: 249 PVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEK 306
VEI G I +A LIN VI+ A PS A + +V EI +P +K
Sbjct: 107 IVEIYGVPDKISRARDLINEVISRAPHQPPPSPFPPSNALQHPTSDLPKVTIEIPIPADK 166
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
G IIG+GGET++ L++ S IQLI ++ G + +R+TGD +++E AQ+++ ++
Sbjct: 167 CGSIIGKGGETMRRLRSSSNCHIQLIQEN---NIGGIVKPLRITGDRQEVEHAQQLVAKI 223
Query: 367 LSQ 369
L++
Sbjct: 224 LAE 226
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+TMS +++VP + VG ++G G TI+ L +G KIQ D D R + IIG S
Sbjct: 242 ATMSLQVKVPRSTVGAIMGVQGATIKKLSDETGTKIQFL--PDDDTKLMERSLAIIGNRS 299
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ A +LI ++ ++ A+ A + +P K GL+IGRGGE
Sbjct: 300 KVYVAAQLIKQIVDSSNDC--------------ANQAVALFYMSIPASKCGLVIGRGGEV 345
Query: 318 IKGLQTRSGARIQL 331
IK + SGA ++L
Sbjct: 346 IKQINAESGAHVEL 359
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 181 QQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD 240
+Q+VD+S + MS +P +K G++IG+ G+ I+ + SGA ++++R+A+
Sbjct: 309 KQIVDSSNDCANQAVALFYMS----IPASKCGLVIGRGGEVIKQINAESGAHVELSREAN 364
Query: 241 ADPHAATRPVEIIGTLSNIDKAEKLI 266
DP T + G+ ++ A+ LI
Sbjct: 365 KDPLEKTFVIR--GSDIQVEHAKHLI 388
>gi|302498875|ref|XP_003011434.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
gi|291174985|gb|EFE30794.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
Length = 561
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 23/202 (11%)
Query: 149 FIDVKEETKEVTVKEE---ETVKEEESVEPSNVVPQQVVDNSKSDD--PSSTD------D 197
F+D E K + + ++++++ E +V + +N +D P D D
Sbjct: 225 FLDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIVSE---NNQARNDGRPIGQDGRPIDAD 281
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ + KI VP+ VG++IG++G+T+R L SG +I I RD ++ RPV + G+
Sbjct: 282 GSETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGES--INGLRPVTLTGSQQ 339
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVAR----GLATAQASGAAEQVEIK--VPNEKVGLII 311
I +A++LI ++ E+D S + R + + G E++ K +P E VG++I
Sbjct: 340 AIQRAKELILGIV-ESDTRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVI 398
Query: 312 GRGGETIKGLQTRSGARIQLIP 333
G+GGETI+ LQT SG +I ++P
Sbjct: 399 GKGGETIRELQTLSGCKINILP 420
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 19/178 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT-RPVEIIGTLSNIDKA 262
IE+ N VG++IG+ G+ +R ++ +GA++Q D+ H T R + G S DKA
Sbjct: 194 IEIDNKHVGLIIGRQGENLRRIENETGARVQFL---DSAEHNKTIRLCRLSGPKSIRDKA 250
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ I+ +++E A G P + + A G +E +I VP+ VGL+IGR GET++
Sbjct: 251 KAEIDRIVSENNQARNDGRP--IGQDGRPIDADG-SETTKIMVPDRTVGLVIGRSGETVR 307
Query: 320 GLQTRSGARIQLIPQHLPEGDG---SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
L RSG RI + DG + R V +TG + I+ A+E+I ++ R S
Sbjct: 308 DLAERSGCRINIAR------DGESINGLRPVTLTGSQQAIQRAKELILGIVESDTRTS 359
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 290 QASGAAEQVE-IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI--PQHLPEGDGSKERI 346
+ SG+ E E I++ N+ VGLIIGR GE ++ ++ +GAR+Q + +H R+
Sbjct: 183 RGSGSDENNETIEIDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEH-----NKTIRL 237
Query: 347 VRVTGDMRQIEIAQEMIKEVLSQ 369
R++G + A+ I ++S+
Sbjct: 238 CRLSGPKSIRDKAKAEIDRIVSE 260
>gi|320039582|gb|EFW21516.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 558
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 34/232 (14%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
DDST + I + + VG++IG+ GD +R ++ ++G +IQ +++ + RP I G
Sbjct: 188 MDDSTET--INIDSKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPESNVN--IRPCRISG 243
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT-------AQASGAAEQ----VEIKVP 303
T + A+ I +I+E +A A A+ + G E ++ VP
Sbjct: 244 TRAARSDAKAEIFRMISENNAARGAMASADRFASRGPHEPPGRQPGYGEDENSSTQMMVP 303
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ VGLIIGRGGETIK LQ RSG + + P+ + + R V + G R I+ A+++I
Sbjct: 304 DRTVGLIIGRGGETIKDLQDRSGCHVIIAPE---DKSLNGLRPVNLNGAPRAIQRAKDLI 360
Query: 364 KEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG 415
EV+ R GG PPQ PRG P + P+RG
Sbjct: 361 LEVVETDSR----QGG------------APPQREPRGYAPERDTGGPAPERG 396
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 17/182 (9%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D S ++ VP+ VG++IG+ G+TI+ LQ SG + I + + RPV + G
Sbjct: 292 EDENSSTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKS--LNGLRPVNLNGA 349
Query: 256 LSNIDKAEKLINAVIAEADA---GGSPSLVARGLATAQASG--AAEQVE--IKVPNEKVG 308
I +A+ LI V+ E D+ G P RG A + +G A E+ + I +P E VG
Sbjct: 350 PRAIQRAKDLILEVV-ETDSRQGGAPPQREPRGYAPERDTGGPAPERGDDSIFIPKESVG 408
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+IIG+GG+TIK LQ +G ++ ++P E D R V + G + IE +M K +L
Sbjct: 409 MIIGKGGDTIKELQNITGCKVNILPAVGREVD----REVVMIGSKQAIE---QMKKSILE 461
Query: 369 QT 370
+
Sbjct: 462 KV 463
>gi|325303002|tpg|DAA34538.1| TPA_inf: far upstream element-binding protein 1 [Amblyomma
variegatum]
Length = 239
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 85/152 (55%), Gaps = 17/152 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP+ VG++IG+ G+ I LQ SG KIQ+ D + RP + G I+KA+ +
Sbjct: 105 VPDKMVGLIIGRGGEQISRLQAESGCKIQMAPDCGG---MSERPCTLTGPRHAIEKAKDM 161
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
IN +I+ GG PS + G VE+ VP +VGL+IG+GGETI+GLQ R+
Sbjct: 162 INQIISR---GGDPSQLNDGHVV---------VELMVPGPRVGLVIGKGGETIRGLQERA 209
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ +I Q P+ ++ +R+TG+ + E
Sbjct: 210 NVKMVMI-QDGPQ-QSMMDKPLRITGEKSKCE 239
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
RGLA A A E VP++ VGLIIGRGGE I LQ SG +IQ+ P+ G
Sbjct: 91 RGLANA----APAVEEWSVPDKMVGLIIGRGGEQISRLQAESGCKIQM----APDCGGMS 142
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
ER +TG IE A++MI +++S+ PS L+ G
Sbjct: 143 ERPCTLTGPRHAIEKAKDMINQIISRGGDPSQLNDG 178
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 172 SVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGA 231
++E + + Q++ S+ DPS +D + ++ VP +VG++IGK G+TIR LQ +
Sbjct: 154 AIEKAKDMINQII--SRGGDPSQLNDGHVVVELMVPGPRVGLVIGKGGETIRGLQERANV 211
Query: 232 KIQITRD 238
K+ + +D
Sbjct: 212 KMVMIQD 218
>gi|291415509|ref|XP_002723994.1| PREDICTED: KH-type splicing regulatory protein, partial
[Oryctolagus cuniculus]
Length = 349
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 60 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 116
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ G P A +G + EI +P K GL+IG+GGET
Sbjct: 117 SVQKAKMMLDDIVSRGRGG--PPGQFHDSANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 172
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 173 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 222
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 36/240 (15%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P DS ++I +P K G++IGK G+TI+
Sbjct: 116 ESVQKAKMMLDDIVSRGRGGPPGQFHDSANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 175
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 176 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 228
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 229 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 283
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHP 403
E+I + G + E A +I ++L Q+ R P P GPR HP
Sbjct: 284 EKIAHIMGPPDRCEHAARIINDLL---------------QSLRVGGPGAPASRGPR--HP 326
>gi|224001814|ref|XP_002290579.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974001|gb|EED92331.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 649
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 27/181 (14%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG +IGK G+ IR LQ SG +I + ++ P A R + GT + ID A++LI+ +
Sbjct: 244 VGRVIGKGGEMIRDLQARSGCRIDVDQNV---PEGAPRIITYRGTRNAIDFAKQLISILC 300
Query: 271 AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQ 330
E G G A + + VP+ +G IIGRGGE I+ LQ++S A+IQ
Sbjct: 301 TE-----------HGKEAELPLGQAMKKLVLVPSTVIGKIIGRGGEMIRELQSKSMAKIQ 349
Query: 331 LIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI-----------KEVLSQTVRPSTLSGG 379
+ H G S++R + VTG + + A+EMI +E L+ +R T++GG
Sbjct: 350 V--DHSGAGMDSQQRQITVTGTTQAVIKAEEMILFLAANPAVDAQESLALLIRDKTMNGG 407
Query: 380 F 380
Sbjct: 408 V 408
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
+G +IG+ G TI LQ RSG IQ I Q++P G + + + G + IE+A++MI+E+
Sbjct: 479 MGRVIGQKGVTINDLQKRSGCDIQ-INQNVPVGMDCE---INIKGSRQGIEMAKQMIQEI 534
Query: 367 L 367
+
Sbjct: 535 I 535
>gi|327295298|ref|XP_003232344.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
gi|326465516|gb|EGD90969.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
Length = 563
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 23/202 (11%)
Query: 149 FIDVKEETKEVTVKEE---ETVKEEESVEPSNVVPQQVVDNSKSDD--PSSTD------D 197
F+D E K + + ++++++ E +V + +N +D P D D
Sbjct: 225 FLDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIVSE---NNQARNDGRPIGQDGRPGDAD 281
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+ + KI VP+ VG++IG++G+T+R L SG +I I RD ++ RPV + G+
Sbjct: 282 GSDTTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGES--INGLRPVTLTGSQQ 339
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVAR----GLATAQASGAAEQVEIK--VPNEKVGLII 311
I +A++LI ++ E+D S + R + G E++ K +P E VG++I
Sbjct: 340 AIQRAKELILGIV-ESDTRTSGNQGQREPRGQGLGGENGGGGEKLNEKMFIPKEYVGMVI 398
Query: 312 GRGGETIKGLQTRSGARIQLIP 333
G+GGETI+ LQT SG +I ++P
Sbjct: 399 GKGGETIRELQTLSGCKINILP 420
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 19/178 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT-RPVEIIGTLSNIDKA 262
IE+ N VG++IG+ G+ +R ++ +GA++Q D+ H T R + G S DKA
Sbjct: 194 IEIDNKHVGLIIGRQGENLRRIENETGARVQFL---DSAEHNKTIRLCRLSGPKSIRDKA 250
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ I+ +++E A G P + + A G ++ +I VP+ VGL+IGR GET++
Sbjct: 251 KAEIDRIVSENNQARNDGRP--IGQDGRPGDADG-SDTTKIMVPDRTVGLVIGRSGETVR 307
Query: 320 GLQTRSGARIQLIPQHLPEGDG---SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
L RSG RI + DG + R V +TG + I+ A+E+I ++ R S
Sbjct: 308 DLAERSGCRINIAR------DGESINGLRPVTLTGSQQAIQRAKELILGIVESDTRTS 359
>gi|195584054|ref|XP_002081830.1| GD25511 [Drosophila simulans]
gi|194193839|gb|EDX07415.1| GD25511 [Drosophila simulans]
Length = 803
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G
Sbjct: 121 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQR 173
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 174 DTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 233
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 234 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 283
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 215 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 272
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G E E+ VP VG++I
Sbjct: 273 AKQMVLDLIAQKDAQGQQQGGRGSGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 332
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 333 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 389
Query: 372 R 372
+
Sbjct: 390 Q 390
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 318 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 375
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 376 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 435
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 436 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 489
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 490 QMISEKINMEL 500
>gi|194374941|dbj|BAG62585.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 100/176 (56%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VPN VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 99 TSMTEEYRVPNGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 155
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 156 SAQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 211
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+ ++L +
Sbjct: 212 IKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 261
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 20/184 (10%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +A
Sbjct: 193 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQA 251
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+++ ++ E D GG G S +++ VP VG++IGR GE IK +Q
Sbjct: 252 CEMVMDILRERDQGGF------GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 305
Query: 323 TRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIE-IAQEMIKEVLSQTV------RPS 374
+G RIQ + DG+ E+I + G + E +A+++ S + RPS
Sbjct: 306 NDAGVRIQ-----FKQDDGTGPEKIAHIMGPPDRCEHLARQLTSTSSSSFLLPTPGHRPS 360
Query: 375 TLSG 378
LSG
Sbjct: 361 CLSG 364
>gi|256078995|ref|XP_002575777.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043992|emb|CCD81538.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 396
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S SR + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 87 PTSNNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 141
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ A ++G+ +E+ VP K
Sbjct: 142 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTTPAY-----NSTGSITTIEMMVPGLKA 196
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 197 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPARVEKARQAVL 251
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 252 VLINSRDRP 260
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 29/192 (15%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G +
Sbjct: 183 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPA 241
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 242 RVEKARQAVLVLINSRDRPGGSMHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 292
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKE-------RIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IK + SGA +++ SKE +I V G+ ++IE A MI E
Sbjct: 293 SIKEICRVSGAHVEI----------SKEPPPDPSIKIFNVRGNRQEIEQAIRMISERAGI 342
Query: 370 -TVRPSTLSGGF 380
RP+T +G
Sbjct: 343 PMTRPATTTGAV 354
>gi|303311415|ref|XP_003065719.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105381|gb|EER23574.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 508
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 112/240 (46%), Gaps = 50/240 (20%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
DDST + I + + VG++IG+ GD +R ++ ++G +IQ ++ + RP I G
Sbjct: 138 MDDSTET--INIDSKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPES--NVNIRPCRISG 193
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----------------- 297
T + A+ I +I+E +A ARG A A A A +
Sbjct: 194 TRAARSDAKAEIFRMISENNA-------ARG-AMASADRFASRGPHEPPGRQPGYGEDEN 245
Query: 298 --VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++ VP+ VGLIIGRGGETIK LQ RSG + + P+ + + R V + G R
Sbjct: 246 SSTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPE---DKSLNGLRPVNLNGAPRA 302
Query: 356 IEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG 415
I+ A+++I EV+ R GG PPQ PRG P + P+RG
Sbjct: 303 IQRAKDLILEVVETDSR----QGG------------APPQREPRGYAPERDTGGPAPERG 346
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 17/182 (9%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D S ++ VP+ VG++IG+ G+TI+ LQ SG + I + + RPV + G
Sbjct: 242 EDENSSTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKS--LNGLRPVNLNGA 299
Query: 256 LSNIDKAEKLINAVIAEADA---GGSPSLVARGLATAQASG--AAEQVE--IKVPNEKVG 308
I +A+ LI V+ E D+ G P RG A + +G A E+ + I +P E VG
Sbjct: 300 PRAIQRAKDLILEVV-ETDSRQGGAPPQREPRGYAPERDTGGPAPERGDDSIFIPKESVG 358
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+IIG+GG+TIK LQ +G ++ ++P E D R V + G + IE +M K +L
Sbjct: 359 MIIGKGGDTIKELQNITGCKVNILPAVGREVD----REVVMIGSKQAIE---QMKKSILE 411
Query: 369 QT 370
+
Sbjct: 412 KV 413
>gi|398409392|ref|XP_003856161.1| hypothetical protein MYCGRDRAFT_107063 [Zymoseptoria tritici
IPO323]
gi|339476046|gb|EGP91137.1| hypothetical protein MYCGRDRAFT_107063 [Zymoseptoria tritici
IPO323]
Length = 1907
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I+V + VG++IG+ G+ +R ++ SGA++Q + + H R I G L + A+
Sbjct: 183 IQVKSALVGLIIGRNGENLRKVESESGARVQFLQAQGS--HVVERDCTISGPLRARESAK 240
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE-----------QVEIKVPNEKVGLIIG 312
I ++I E GG+PS +G TA G A+ +I VP++ VGLIIG
Sbjct: 241 AAIFSIIEEN--GGTPSQPEKGAYTAGMPGRAKVNLPALREGEASTQIMVPDKTVGLIIG 298
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
RGGETIK LQ RSG + ++ ++ + R V + G R A+EMI E++ R
Sbjct: 299 RGGETIKDLQERSGCHVNIVGEN---KSVNGLRPVNLIGSERATATAKEMILEIVESDSR 355
Query: 373 PSTLSGG 379
+ GG
Sbjct: 356 DNQARGG 362
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 147/324 (45%), Gaps = 64/324 (19%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TI+ LQ SG + I + RPV +IG+
Sbjct: 283 STQIMVPDKTVGLIIGRGGETIKDLQERSGCHVNIV--GENKSVNGLRPVNLIGSERATA 340
Query: 261 KAEKLINAVIAEADA--------GGS---PSLVARGLATAQA-----SGAAEQVE--IKV 302
A+++I ++ E+D+ GGS P+ RG + G + +E I V
Sbjct: 341 TAKEMILEIV-ESDSRDNQARGGGGSSMPPAGRDRGYDNNNSQRGGGGGGRDHIEKTISV 399
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
P++ VG+IIG+GGETIK +Q +G +I + P D +E + + G + A+++
Sbjct: 400 PSQAVGMIIGKGGETIKDMQRTTGCKINVNQPKPP--DIYRE--IDLAGSASAMAEAEKV 455
Query: 363 IKEVLSQTVRPSTLSGG----------------FNQQAYRPRVPTGPPQWGPRGSHPSQP 406
I E + +TVR + G ++QQ + P P +G G+ P Q
Sbjct: 456 IWEKV-ETVRERDAASGRDPGPGRDQGPSQYNAYSQQ----QAPPAMPGYGQYGAQP-QA 509
Query: 407 MAYDYPQR--------GPYPS--QNPHYPHLPYGNYPPQQMAPRSNY-----GGPPNMQG 451
A+ PQ G S Q+P+ Y + QMA + GG PN +
Sbjct: 510 QAFQLPQALQQLTQQPGATSSDQQDPYAAQQWYAQWFASQMAQQQQQQQQPPGGHPNAKL 569
Query: 452 AAGGYDYYGGQGGHVSDRPVSVSH 475
G +YG + V P++V++
Sbjct: 570 VLLGLQFYGDKVWMVF--PITVTN 591
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+ + I VP+ VG++IGK G+TI+ +Q +G KI + + D + R +++ G+ S +
Sbjct: 393 IEKTISVPSQAVGMIIGKGGETIKDMQRTTGCKINVNQPKPPDIY---REIDLAGSASAM 449
Query: 260 DKAEKLI 266
+AEK+I
Sbjct: 450 AEAEKVI 456
>gi|195488051|ref|XP_002092151.1| GE14030 [Drosophila yakuba]
gi|194178252|gb|EDW91863.1| GE14030 [Drosophila yakuba]
Length = 802
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G+A DTI ++Q SG K+Q+ +D D R + + G
Sbjct: 118 TSCEEQIRLPESVAGAFMGRASNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQR 170
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 171 DTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 230
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVL 367
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ +++
Sbjct: 231 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLI 278
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + + R I GT ++
Sbjct: 315 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDE--MGDRRCVIQGTRQQVE 372
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 373 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 432
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 433 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 486
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 487 QMISEKINMEL 497
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 212 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 269
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G E VE+ VP VG++I
Sbjct: 270 AKQMVLDLIAQKDAQAQQQGGRGGGGGGGGPGMGFNNFNNGNGGESVEVFVPKIAVGVVI 329
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I ++ +
Sbjct: 330 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTIDGLIENVM 386
Query: 372 R 372
+
Sbjct: 387 Q 387
>gi|256078997|ref|XP_002575778.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043991|emb|CCD81537.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 373
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S SR + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 87 PTSNNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 141
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ A ++G+ +E+ VP K
Sbjct: 142 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTTPA-----YNSTGSITTIEMMVPGLKA 196
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 197 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPARVEKARQAVL 251
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 252 VLINSRDRP 260
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G +
Sbjct: 183 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPA 241
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 242 RVEKARQAVLVLINSRDRPGGSMHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 292
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ-TVRPST 375
+IK + SGA +++ + P+ +I V G+ ++IE A MI E RP+T
Sbjct: 293 SIKEICRVSGAHVEISKEPPPD---PSIKIFNVRGNRQEIEQAIRMISERAGIPMTRPAT 349
Query: 376 LSGGF 380
+G
Sbjct: 350 TTGAV 354
>gi|413949053|gb|AFW81702.1| hypothetical protein ZEAMMB73_884899 [Zea mays]
Length = 405
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
Query: 143 FSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDD--STM 200
F E+ +I ++ + V++ +++ +K E++E + Q+ S +D +S +
Sbjct: 180 FENEQLYIQMELCDRSVSMNQKQPLKCREALE----LLYQLTRLSFADLCASIRLRLKSA 235
Query: 201 SRKIE---------VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
SR + V VGV+IGKAG+TIRY+Q SGAKIQ+TRD +A+P A TR VE
Sbjct: 236 SRSVMFVFSLTGTVVNLLLVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVE 295
Query: 252 IIGTLSNIDKAEKLINAVIAEA 273
+ G L I KAE+LI V+AE
Sbjct: 296 LSGKLERISKAEQLIKEVLAEV 317
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 39/113 (34%)
Query: 307 VGLIIGRGGETIKGLQTRSGARIQ------------------------------------ 330
VG+IIG+ GETI+ +Q +SGA+IQ
Sbjct: 255 VGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKLERISKAEQLIKEVL 314
Query: 331 --LIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFN 381
+IP HLP GD S ER V + G QIE A+++I EV S+ P LSG +
Sbjct: 315 AEVIPLHLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSEK-EPLILSGELD 366
>gi|17137136|ref|NP_477123.1| P-element somatic inhibitor, isoform B [Drosophila melanogaster]
gi|994900|gb|AAB50636.1| PSI [Drosophila sp.]
gi|21645257|gb|AAF57942.2| P-element somatic inhibitor, isoform B [Drosophila melanogaster]
gi|162944872|gb|ABY20505.1| LD35640p [Drosophila melanogaster]
Length = 796
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G
Sbjct: 120 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQR 172
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 173 DTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 232
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 233 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 282
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 214 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 271
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 272 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 331
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 332 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 388
Query: 372 R 372
+
Sbjct: 389 Q 389
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 317 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 374
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 375 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 434
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 435 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 488
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 489 QMISEKINMEL 499
>gi|45552675|ref|NP_995862.1| P-element somatic inhibitor, isoform C [Drosophila melanogaster]
gi|45445514|gb|AAS64831.1| P-element somatic inhibitor, isoform C [Drosophila melanogaster]
Length = 797
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G
Sbjct: 120 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQR 172
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 173 DTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 232
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 233 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 282
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 214 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 271
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 272 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 331
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 332 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 388
Query: 372 R 372
+
Sbjct: 389 Q 389
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 317 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 374
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 375 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 434
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 435 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 488
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 489 QMISEKINMEL 499
>gi|3929697|emb|CAA21318.1| EG:EG0003.2 [Drosophila melanogaster]
Length = 806
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G
Sbjct: 133 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQR 185
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 186 DTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 245
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 246 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 295
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 227 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 284
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 285 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 344
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 345 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 401
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 330 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 387
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASG--AAEQVEIKVPNEK------------ 306
A++ I+ +I +V+R +A+ ++ + K K
Sbjct: 388 DAKRTIDGLIENV-------MVSRKYFIKEANTLPMSDVIATKWHESKWQWRRRWPRRRL 440
Query: 307 ------VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIE 357
+ ++IGRGGETIK + +SGA ++ + + S E++ + G Q+E
Sbjct: 441 WQLQLRLWIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVE 494
Query: 358 IAQEMIKEVLSQTV 371
A++MI E ++ +
Sbjct: 495 AARQMISEKINMEL 508
>gi|193083019|ref|NP_001122343.1| far upstream element-binding protein [Ciona intestinalis]
gi|70569713|dbj|BAE06462.1| Ci-FUSE [Ciona intestinalis]
Length = 325
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
MS I +P++ VG++IG+ G+ I +Q +G +IQIT+ P RP + GT
Sbjct: 47 IMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSI---PGTKERPCTLSGTQEQ 103
Query: 259 IDKAEKLINAVIAEADAG--GSPSLVARGLATAQASGAAEQ-VEIKVPNEKVGLIIGRGG 315
I+ ++N +I+ + AG GS +++G G E+ +EI VP +K GLIIG+GG
Sbjct: 104 IEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEIAVPPDKCGLIIGKGG 163
Query: 316 ETIKGLQTRSGARIQLI 332
ETIK LQ G ++ LI
Sbjct: 164 ETIKMLQQSLGVKMLLI 180
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 22/115 (19%)
Query: 284 RGLATAQASGA-AEQVE----------------IKVPNEKVGLIIGRGGETIKGLQTRSG 326
+ LAT Q S A +EQ+E I++P++ VGLIIGRGGE I +Q +G
Sbjct: 19 KKLATPQTSAANSEQIEFDNLGMQQNPDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETG 78
Query: 327 ARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFN 381
RIQ I Q +P G+KER ++G QIE+ + M+ E++S++ + TL FN
Sbjct: 79 CRIQ-ITQSIP---GTKERPCTLSGTQEQIEVCRNMLNEIISRS-QAGTLGSNFN 128
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP +K G++IGK G+TI+ LQ + G K+ + +D+ D ++P+ I G N+D
Sbjct: 145 SIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDS-TDNIGQSKPLRITGPQLNVD 203
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLII 311
A ++ ++A D + + R G + + I VP VG++I
Sbjct: 204 NAVSAVHQMMANRDQQIAQQKMERDGGGGGGQGGMDPNMFGDDVNKTIIPVPKAAVGVVI 263
Query: 312 GRGGETIKGLQTRSGARIQLIPQH--LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
G+GG+ I +Q +G R+Q P+ LP ER+ V G ++ A I E++
Sbjct: 264 GKGGDMINQIQNVTGTRVQFKPEDPTLP------ERMCSVMGPKEGVDAAIRRIHEIIQN 317
Query: 370 TV 371
+
Sbjct: 318 VL 319
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
DP+ D I VP VGV+IGK GD I +Q +G ++Q + DP R
Sbjct: 239 DPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRVQFKPE---DPTLPERMC 295
Query: 251 EIIGTLSNIDKAEKLINAVI 270
++G +D A + I+ +I
Sbjct: 296 SVMGPKEGVDAAIRRIHEII 315
>gi|302852888|ref|XP_002957962.1| subunit of circadian RNA-binding protein [Volvox carteri f.
nagariensis]
gi|297592090|gb|ADI46875.1| CRB1f [Volvox carteri f. nagariensis]
gi|300256728|gb|EFJ40988.1| subunit of circadian RNA-binding protein [Volvox carteri f.
nagariensis]
Length = 494
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 21/172 (12%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D + I P +KVG +IG+AG TIR L+ ++ +IQ+ A D +PV + G
Sbjct: 122 DGNATETIMCPPDKVGRIIGRAGATIRDLEASTSTRIQVDHKAPGD-----KPVVVSGRR 176
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++D+A++ ++ +I+ A SPS T + G E P VG IIGRGGE
Sbjct: 177 DDVDRAKRAVHDLISGATETTSPS-------TNEVQGTVE-----CPPGIVGRIIGRGGE 224
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
TI+ LQ SGA I L+ Q PEG R + +TG ++ A M+ E+++
Sbjct: 225 TIRTLQQASGAHI-LVNQDFPEG---VPRQIIITGAQDAVQRATSMVSELIN 272
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 109/239 (45%), Gaps = 44/239 (18%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+E P VG +IG+ G+TIR LQ SGA I + +D P R + I G + +A
Sbjct: 208 VECPPGIVGRIIGRGGETIRTLQQASGAHILVNQDF---PEGVPRQIIITGAQDAVQRAT 264
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+++ +I ++ + +++ R G+ E VE P VG IIG+GGETIK LQ
Sbjct: 265 SMVSELINGSNHTNTQAIIQR-----FGVGSTEVVE--CPKAMVGRIIGKGGETIKDLQK 317
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQ 383
R IQ+ GS V +TG I A+ I+E++ PS SGG
Sbjct: 318 RFNVSIQI-------DQGSTPCKVTITGPSPLISSARRSIEELIRT---PSQPSGG---- 363
Query: 384 AYRPRVPTGP--------PQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPP 434
RP GP P + P G++ M PQ YP+ H + PYG Y P
Sbjct: 364 GIRP----GPSFTTSYTQPNYTPYGAYGGFAM----PQ-AVYPA---HSGYQPYGGYSP 410
>gi|405969780|gb|EKC34731.1| Far upstream element-binding protein 3 [Crassostrea gigas]
Length = 772
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 95/167 (56%), Gaps = 7/167 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP NKVG++IGK G+TI+ LQ +G K+ + +D++ P AA +P+ I G +A
Sbjct: 303 EMMVPGNKVGLVIGKGGETIKQLQERAGVKMVMIQDSNI-PSAAEKPLRISGDPQKCQRA 361
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
++++ ++AE + + G +EI VP VG++IG+ G+ IK +Q
Sbjct: 362 KEMVLDLLAEKEMENMNKGFNDYGSYGGGGGGGPPMEIPVPRTAVGIVIGKNGDMIKKIQ 421
Query: 323 TRSGARIQLIPQHLPEGDG-SKERIVRVTGDMRQIEIAQEMIKEVLS 368
SGA++Q DG S ER+ + G +++IA +MI+E+L+
Sbjct: 422 QESGAKVQ-----FKADDGNSPERVCAIAGSPDKVQIAAQMIQELLN 463
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 22/191 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P+ VG++IGK G+ I LQ +G KIQI D P R + G+ I ++
Sbjct: 199 IPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMPD---RQCTLTGSSGAIAACKQQ 255
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQ--------------VEIKVPNEKVGLII 311
I +I A+ G P + G VE+ VP KVGL+I
Sbjct: 256 IQDIIMRANQTGGPMMGGMDGNGGGFGGGGGGGGGGGMGNGGGQTVVEMMVPGNKVGLVI 315
Query: 312 GRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+GGETIK LQ R+G ++ +I ++P + E+ +R++GD ++ + A+EM+ ++L++
Sbjct: 316 GKGGETIKQLQERAGVKMVMIQDSNIPS---AAEKPLRISGDPQKCQRAKEMVLDLLAEK 372
Query: 371 VRPSTLSGGFN 381
++ GFN
Sbjct: 373 -EMENMNKGFN 382
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 29/186 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP VG++IGK GD I+ +Q SGAK+Q D D ++ R I G+ + A
Sbjct: 398 EIPVPRTAVGIVIGKNGDMIKKIQQESGAKVQFKAD---DGNSPERVCAIAGSPDKVQIA 454
Query: 263 EKLINAVIAEAD-----------------------AGGSPSLVARGLATAQASGAAEQVE 299
++I ++ + + G G ++ +
Sbjct: 455 AQMIQELLNDYNQREGGMGRGFGGGRGRGGPGRGRGGFGGGPGRGMGRGDGFGGFQDETQ 514
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
VP +K GL+IG+GGETI+ + +SGA ++L Q P G E++ + G QI+ A
Sbjct: 515 FAVPADKCGLVIGKGGETIRQINQQSGAHVEL--QKHP-GPNPNEKLFNIKGGPDQIQHA 571
Query: 360 QEMIKE 365
+MI E
Sbjct: 572 IQMISE 577
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E +P++ VGLIIG+GGE I LQ +G +IQ+ P+G G +R +TG I
Sbjct: 196 EYAIPDKMVGLIIGKGGEQITRLQAETGCKIQI----APDGSGMPDRQCTLTGSSGAIAA 251
Query: 359 AQEMIKEVL 367
++ I++++
Sbjct: 252 CKQQIQDII 260
>gi|367055754|ref|XP_003658255.1| hypothetical protein THITE_2124810 [Thielavia terrestris NRRL 8126]
gi|347005521|gb|AEO71919.1| hypothetical protein THITE_2124810 [Thielavia terrestris NRRL 8126]
Length = 558
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 8/172 (4%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG
Sbjct: 297 DGEDSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--SENKSVNGLRPVNLIGPP 354
Query: 257 SNIDKAEKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVE--IKVPNEKVGLIIGR 313
+ A++LI ++ +++ G +P++ G G ++V I VP++ VG+IIG+
Sbjct: 355 AAARHAKELILEIVDSDSRNGNNPAIARGGRGDNYGGGGPDKVNDSIYVPSDAVGMIIGK 414
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
GGETI+ +Q +G +I ++ P G G ER + + G I A+ I++
Sbjct: 415 GGETIREMQNMTGCKINVL---QPSGPGEVEREIELVGSRDAIAQAKRAIED 463
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
D+S M +E+ + VG++IG+ G+ +R ++ S ++Q + R I G
Sbjct: 202 DNSEM---MEIEASLVGLIIGRQGENLRRVEGESRCRVQFIPPTGQNDQ--YRLCRITGP 256
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQA-----SGAAEQVEIKVPNEKVGLI 310
++A+++IN +I D+G + ++I VP+ VGLI
Sbjct: 257 RPQREEAKEMINRIIR--DSGLRGGPDRGRDGGRGPVPPVPKDGEDSLQIMVPDRTVGLI 314
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IGRGGETI+ LQ RSG I ++ ++ + R V + G A+E+I E++
Sbjct: 315 IGRGGETIRDLQERSGCHINIVSEN---KSVNGLRPVNLIGPPAAARHAKELILEIVDSD 371
Query: 371 VR 372
R
Sbjct: 372 SR 373
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMR 354
+E +EI+ VGLIIGR GE ++ ++ S R+Q IP P G + R+ R+TG
Sbjct: 204 SEMMEIEA--SLVGLIIGRQGENLRRVEGESRCRVQFIP---PTGQNDQYRLCRITGPRP 258
Query: 355 QIEIAQEMIKEVLSQTVRPSTL 376
Q E A+EMI ++ +R S L
Sbjct: 259 QREEAKEMI----NRIIRDSGL 276
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 98/168 (58%), Gaps = 10/168 (5%)
Query: 204 IEVPNNKVGV--LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+EVP++ VG+ +IG+ G+ I +Q + ++Q++ ++D + R + G+ ++D+
Sbjct: 37 MEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQMSPESDGN---NMRQCTLQGSKMSVDR 93
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGLIIGRGGETIK 319
A +IN VIA A P+ G Q+ E+ +P K GL+IG+GGETIK
Sbjct: 94 ARAMINEVIARAGNRPPPNRAGH-FDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIK 152
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+Q ++G ++ +I ++ + G + + +R+TGD ++E A+ M++E+L
Sbjct: 153 NIQEQTGVKMVMIQEN--QESGGQPKPLRITGDPEKVENARRMVEEIL 198
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D A R I GT I KA
Sbjct: 226 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDDDQTAQERCAVIQGTAEQIAKA 283
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ A +G AE + VP+ K GL+IG+GGETIK +
Sbjct: 284 TQFISELVKKSGA----------------AGGAEMFYMHVPSNKTGLVIGKGGETIKQIC 327
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L P + E++ + G QI AQ +I+
Sbjct: 328 AESGAHVELSRDPPPN---ASEKVFIIKGTPYQIHHAQHIIR 366
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+++++ +P K G++IGK G+TI+ +Q +G K+ + ++ + + +P+ I G +
Sbjct: 129 ITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQE-NQESGGQPKPLRITGDPEKV 187
Query: 260 DKAEKLINAVIAEAD-----AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+ A +++ ++ + G P + G++ Q S E+ VP VG+IIG+G
Sbjct: 188 ENARRMVEEILQSREDHPPGHFGFPG--SFGISGGQRSIG----EVIVPRASVGMIIGKG 241
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
GETIK L SGA+IQ P + ++ER + G QI A + I E++ ++
Sbjct: 242 GETIKRLAAESGAKIQFKPD---DDQTAQERCAVIQGTAEQIAKATQFISELVKKS 294
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 300 IKVPNEKVGL--IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++VP+ VGL +IGRGGE I +Q+++ R+Q+ PE DG+ R + G ++
Sbjct: 37 MEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQM----SPESDGNNMRQCTLQGSKMSVD 92
Query: 358 IAQEMIKEVLSQ 369
A+ MI EV+++
Sbjct: 93 RARAMINEVIAR 104
>gi|183396881|gb|AAI66022.1| Khsrp protein [synthetic construct]
Length = 542
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +
Sbjct: 31 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQ 89
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A +++ ++ E D GG G S +++ VP VG++IGR GE IK +
Sbjct: 90 ACEMVMDILRERDQGGF------GDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIKKI 143
Query: 322 QTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
Q +G RIQ + DG+ E+I + G + E A +I ++L Q++R
Sbjct: 144 QNDAGVRIQ-----FKQDDGTGPEKIAHIMGPPDRCEHAARIINDLL-QSLR 189
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 122 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 178
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G A G+ ++ +P K GL+IGRG
Sbjct: 179 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 238
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 239 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 290
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 16/99 (16%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMR 354
EI +P K GL+IG+GGETIK LQ R+G ++ LI DGS+ ++ +R+ GD
Sbjct: 32 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPY 85
Query: 355 QIEIAQEMIKEVLSQTVRPSTLSGGF-NQQAYRPRVPTG 392
+++ A EM+ ++L + + GGF ++ Y RV G
Sbjct: 86 KVQQACEMVMDILRERDQ-----GGFGDRNEYGSRVGGG 119
>gi|424512903|emb|CCO66487.1| predicted protein [Bathycoccus prasinos]
Length = 565
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 17/172 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+ T + K++ P + VG +IGK G+TI+ L +GAK+ I + + AD R + I GT
Sbjct: 299 EETRTVKLDCPQSLVGKIIGKGGETIKGLASTTGAKVIIDQMSMADGEP--RKIVITGTN 356
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ I+K K+ D P + AQ A V ++ P E VG +IGRGGE
Sbjct: 357 TQIEKVSKMCE------DIMNGPHGTVSAVQAAQP--GAIVVNVECPKECVGRVIGRGGE 408
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
TIKG+Q +GAR Q+ P +V ++GD + + + Q+++ E+++
Sbjct: 409 TIKGIQLATGARAQIDQTCTP-------CLVIISGDPQYVNVCQQVVVEIIN 453
>gi|431897017|gb|ELK06281.1| Far upstream element-binding protein 1 [Pteropus alecto]
Length = 632
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 23/170 (13%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + +VP+ VG +IG+ G+ I +Q +SG R + GT
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQDSGG-------------LPERSCMLTGTPE 145
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+GGET
Sbjct: 146 SVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGKGGET 197
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 198 IKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 245
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 145 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 199
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 200 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 256
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 257 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 308
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 309 PDRIAQITGPPDRCQHAAEIITDLL 333
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 14/71 (19%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E KVP+ VG IIGRGGE I +Q SG G ER +TG ++
Sbjct: 104 EYKVPDGMVGFIIGRGGEQISRIQQDSG--------------GLPERSCMLTGTPESVQS 149
Query: 359 AQEMIKEVLSQ 369
A+ ++ +++ +
Sbjct: 150 AKRLLDQIVEK 160
>gi|302658378|ref|XP_003020893.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
gi|291184763|gb|EFE40275.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
Length = 561
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 34/245 (13%)
Query: 113 VKTEQHSSVEEQASVDNQQISV-----KEETKEVLFST--EEAFIDVKEETKEVTVKEE- 164
V E + ++E +DN+ + + E + + T F+D E K + +
Sbjct: 186 VSDENNETIE----IDNKHVGLIIGRQGENLRRIENETGARVQFLDSAEHNKTIRLCRLS 241
Query: 165 --ETVKEEESVEPSNVVPQQVVDNSKSDD--PSSTD------DSTMSRKIEVPNNKVGVL 214
++++++ E +V + +N +D P D D + + KI VP+ VG++
Sbjct: 242 GPKSIRDKAKAEIDRIVSE---NNQARNDGRPIGQDGRPVDADGSETTKIMVPDRTVGLV 298
Query: 215 IGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEAD 274
IG++G+T+R L SG +I I RD ++ RPV + G+ I +A++LI ++ E+D
Sbjct: 299 IGRSGETVRDLAERSGCRINIARDGES--INGLRPVTLTGSQQAIQRAKELILGIV-ESD 355
Query: 275 AGGSPSLVAR----GLATAQASGAAEQVEIK--VPNEKVGLIIGRGGETIKGLQTRSGAR 328
S + R + + G E++ K +P E VG++IG+GGE I+ LQT SG +
Sbjct: 356 TRTSGNQGQREPRGQGSGGENGGGGEKLNDKMFIPKEYVGMVIGKGGEAIRELQTLSGCK 415
Query: 329 IQLIP 333
I ++P
Sbjct: 416 INILP 420
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 19/178 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT-RPVEIIGTLSNIDKA 262
IE+ N VG++IG+ G+ +R ++ +GA++Q D+ H T R + G S DKA
Sbjct: 194 IEIDNKHVGLIIGRQGENLRRIENETGARVQFL---DSAEHNKTIRLCRLSGPKSIRDKA 250
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+ I+ +++E A G P + + A G +E +I VP+ VGL+IGR GET++
Sbjct: 251 KAEIDRIVSENNQARNDGRP--IGQDGRPVDADG-SETTKIMVPDRTVGLVIGRSGETVR 307
Query: 320 GLQTRSGARIQLIPQHLPEGDG---SKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
L RSG RI + DG + R V +TG + I+ A+E+I ++ R S
Sbjct: 308 DLAERSGCRINIAR------DGESINGLRPVTLTGSQQAIQRAKELILGIVESDTRTS 359
>gi|45551107|ref|NP_725623.2| P-element somatic inhibitor, isoform A [Drosophila melanogaster]
gi|45445515|gb|AAM70893.2| P-element somatic inhibitor, isoform A [Drosophila melanogaster]
Length = 716
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQR 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 DTVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
>gi|258567330|ref|XP_002584409.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905855|gb|EEP80256.1| predicted protein [Uncinocarpus reesii 1704]
Length = 558
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 34/229 (14%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+S I + + VG++IG+ GD +R ++ ++G +IQ +++ + RP I G +
Sbjct: 186 VSETINIDSKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPESNIN--IRPCRITGPRAAR 243
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATA---------QASGAAEQ----VEIKVPNEK 306
+ A+ I +I+E +A + ++ G A + SG E+ ++ VP+
Sbjct: 244 NDAKAEIFRMISENNAARGANAISAGDRFASRVQHEPPSRPSGYGEEENSTTQMMVPDRT 303
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VGLIIGRGGETIK LQ RSG + + P+ + + R V ++G R I+ A+++I EV
Sbjct: 304 VGLIIGRGGETIKDLQDRSGCHVIIAPE---DKSLNGLRPVNLSGPARAIQRAKDLILEV 360
Query: 367 LSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRG 415
+ R PP PRG P + P+RG
Sbjct: 361 VETDSRQG----------------NAPPPREPRGYAPERDTGGPLPERG 393
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP+ VG++IG+ G+TI+ LQ SG + I + + RPV + G I +A
Sbjct: 296 QMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKS--LNGLRPVNLSGPARAIQRA 353
Query: 263 EKLINAVIAEADAGGS--PSLVARGLATAQASGA----AEQVEIKVPNEKVGLIIGRGGE 316
+ LI V+ G+ P RG A + +G I +P E VG+IIG+GG+
Sbjct: 354 KDLILEVVETDSRQGNAPPPREPRGYAPERDTGGPLPERGDDSIFIPKEAVGMIIGKGGD 413
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL------SQT 370
TIK +QT +G ++ ++P + D R V + G + I+ + I E + SQT
Sbjct: 414 TIKEMQTATGCKVNILPAVGRDTD----REVVMIGSRQSIDQMKRNILEKVEAFKSRSQT 469
Query: 371 VRPSTLSGGFNQQAYR 386
R S +Q +R
Sbjct: 470 RRDDGYSDRPSQTQFR 485
>gi|256078993|ref|XP_002575776.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043993|emb|CCD81539.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 356
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S SR + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 87 PTSNNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 141
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ A ++G+ +E+ VP K
Sbjct: 142 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTTPA-----YNSTGSITTIEMMVPGLKA 196
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 197 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPARVEKARQAVL 251
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 252 VLINSRDRP 260
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 28/168 (16%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G +
Sbjct: 183 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPA 241
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 242 RVEKARQAVLVLINSRDRPGGSMHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 292
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKE-------RIVRVTGDMRQIE 357
+IK + SGA +++ SKE +I V G+ ++IE
Sbjct: 293 SIKEICRVSGAHVEI----------SKEPPPDPSIKIFNVRGNRQEIE 330
>gi|427792601|gb|JAA61752.1| Putative kh-type splicing regulatory protein, partial
[Rhipicephalus pulchellus]
Length = 454
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 17/156 (10%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IG+ G+ I LQ SG KIQ+ D + RP + G I+KA+++IN +I+
Sbjct: 3 VIGRGGEQISRLQAESGCKIQMAPDCGG---MSERPCTLTGPRHAIEKAKEMINQIISR- 58
Query: 274 DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
GG PS + G VE+ VP +VGL+IG+GGETI+GLQ R+ ++ +I
Sbjct: 59 --GGDPSQLNDGHVV---------VELMVPGPRVGLVIGKGGETIRGLQERANVKMVMI- 106
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
Q P+ ++ +R+TG+ + E A+ ++ +++++
Sbjct: 107 QDGPQ-QSMMDKPLRITGEKSKCEYAKRLVLDLITE 141
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 172 SVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGA 231
++E + + Q++ S+ DPS +D + ++ VP +VG++IGK G+TIR LQ +
Sbjct: 44 AIEKAKEMINQII--SRGGDPSQLNDGHVVVELMVPGPRVGLVIGKGGETIRGLQERANV 101
Query: 232 KIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADA---------------- 275
K+ + +D +P+ I G S + A++L+ +I E +
Sbjct: 102 KMVMIQDGPQQ-SMMDKPLRITGEKSKCEYAKRLVLDLITEKELENVRRGYGGGGPGGPG 160
Query: 276 ------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARI 329
GG G G A Q E+ VP + VG++IG+ G+ IK +Q +GAR+
Sbjct: 161 GGGGGGGGEYGGPPGGGPGGGGPGGASQ-EVLVPKQAVGVVIGKQGDMIKRIQQETGARV 219
Query: 330 QLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLS 377
Q P+ D + +R+ +TG Q+ A I E++ + S +
Sbjct: 220 QF---QQPQDDNAPDRVCLLTGGPDQVHHAASFIGELIQSVLNRSGFA 264
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMR 354
+V+ VP K GL+IG+GGE I+ + +SGA ++L P E++ + G+ +
Sbjct: 319 VHEVQYTVPANKCGLVIGKGGEAIRQINQQSGAHVELSRAPPPN---PVEKVFIIRGNPQ 375
Query: 355 QIEIAQEMIKE 365
QIE AQ++I E
Sbjct: 376 QIEHAQQLINE 386
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII-GTLSNIDKAEK 264
VP NK G++IGK G+ IR + SGA ++++R A P V II G I+ A++
Sbjct: 326 VPANKCGLVIGKGGEAIRQINQQSGAHVELSR---APPPNPVEKVFIIRGNPQQIEHAQQ 382
Query: 265 LINAVI 270
LIN I
Sbjct: 383 LINERI 388
>gi|296808217|ref|XP_002844447.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
gi|238843930|gb|EEQ33592.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
Length = 570
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 83/137 (60%), Gaps = 9/137 (6%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VP+ VG++IG++G+T+R L SG +I I RD ++ RPV + G+ + +A
Sbjct: 288 KIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGES--INGLRPVTLTGSQQAMQRA 345
Query: 263 EKLINAVIAEADA--GGSPSLVARGLATA--QASGAAEQV--EIKVPNEKVGLIIGRGGE 316
++LI ++ E+D G RG A + G +++ +I +P E VG++IG+GGE
Sbjct: 346 KELIVGIV-ESDNRPGNQGQREPRGQAMSADNGGGGGDKLNDKIFIPKEAVGMVIGKGGE 404
Query: 317 TIKGLQTRSGARIQLIP 333
TI+ LQ+ SG +I ++P
Sbjct: 405 TIRELQSFSGCKINILP 421
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 17/181 (9%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT-RPVEIIGTLSNI 259
S IE+ N VG++IG+ G+ +R ++ +GA++Q D+ H T R + G+
Sbjct: 188 SETIEIDNKYVGLIIGRQGENLRRIENETGARVQFL---DSAEHNKTIRLYRLTGSKLVR 244
Query: 260 DKAEKLINAVIAEAD---AGGSPS-LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
DKA+ I+ V++E + G PS + + ++ ++I VP+ VGL+IGR G
Sbjct: 245 DKAKAEIDRVVSEGNQSRGDGRPSDRSGQDGGRSGDGDGSDSMKIMVPDRTVGLVIGRSG 304
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDG---SKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
ET++ L RSG RI + DG + R V +TG + ++ A+E+I ++ R
Sbjct: 305 ETVRDLAERSGCRINIAR------DGESINGLRPVTLTGSQQAMQRAKELIVGIVESDNR 358
Query: 373 P 373
P
Sbjct: 359 P 359
>gi|341893795|gb|EGT49730.1| hypothetical protein CAEBREN_09981 [Caenorhabditis brenneri]
Length = 529
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 17/170 (10%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD---ADADPHAATRPVEIIGTLSNI 259
+I +P NK G++IGKAG+T+R L+ SG +I + +D AD+D +P+++ G + +
Sbjct: 122 QIMIPANKCGMVIGKAGETMRKLRNLSGCQIHLVQDSKLADSD-----KPLQVTGLPAQV 176
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+AE+L+ ++ +P G A S + + + VP E VG I+G G IK
Sbjct: 177 KRAEQLVEDILKT-----TPETYISG-NIASRSDNTKTIHVNVPREAVGAIMGTNGVIIK 230
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
L +G +IQ +P P ER + + G +IEIA I++++S
Sbjct: 231 KLSQETGTKIQFMPDADP---ALLERSIAIIGTPIKIEIAVGCIRQIVSM 277
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 189 SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATR 248
S + +S D+T + + VP VG ++G G I+ L +G KIQ DADP R
Sbjct: 196 SGNIASRSDNTKTIHVNVPREAVGAIMGTNGVIIKKLSQETGTKIQFM--PDADPALLER 253
Query: 249 PVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVG 308
+ IIGT I+ A I +++ A + + G + VP+ K G
Sbjct: 254 SIAIIGTPIKIEIAVGCIRQIVSMATSSQHKT----------KDGPLTIFYLTVPSNKCG 303
Query: 309 LIIGRGGETIKGLQTRSGARIQL 331
L+IGRGGE IK + SGA +L
Sbjct: 304 LVIGRGGEVIKQINVESGAHCEL 326
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 93/174 (53%), Gaps = 17/174 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D + ++ +P + VG++IG++G I L ++ K ++ P + R V++ GT
Sbjct: 34 DGVSTEEMFIPADVVGLVIGRSGSEI--LMMSAVYKCRVFVVTTDIPSSGFRTVQLTGTP 91
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ I++A+K I +IA A + S A + ++I +P K G++IG+ GE
Sbjct: 92 NAIEQAKKHICELIAGAKSPRS------------APEEPQTIQIMIPANKCGMVIGKAGE 139
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
T++ L+ SG +I L+ Q D K ++VTG Q++ A+++++++L T
Sbjct: 140 TMRKLRNLSGCQIHLV-QDSKLADSDKP--LQVTGLPAQVKRAEQLVEDILKTT 190
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 67 LDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKE--EELESAEVKTEQHSSVEEQ 124
+ D K D P+ V GL P +V AEQL ED K E S + + ++
Sbjct: 155 VQDSKLADSDKPLQVTGL----PAQVKRAEQLVEDILKTTPETYISGNIASRSDNTKTIH 210
Query: 125 ASVDNQQISVKEETKEVLFS-------TEEAFI-DVKEETKEVTVKEEET-VKEEESVEP 175
+V + + T V+ T+ F+ D E ++ T +K E +V
Sbjct: 211 VNVPREAVGAIMGTNGVIIKKLSQETGTKIQFMPDADPALLERSIAIIGTPIKIEIAVG- 269
Query: 176 SNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
+Q+V + S + D + VP+NK G++IG+ G+ I+ + SGA ++
Sbjct: 270 ---CIRQIVSMATSSQHKTKDGPLTIFYLTVPSNKCGLVIGRGGEVIKQINVESGAHCEL 326
Query: 236 TRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
+R+ + T + GT ++ A+ LI + E
Sbjct: 327 SREKEETLEEKTFVIR--GTDQQVEHAKHLIGQKVGE 361
>gi|62088312|dbj|BAD92603.1| far upstream element-binding protein variant [Homo sapiens]
Length = 493
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 5 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 59
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 60 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 116
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 117 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 168
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
ERI ++TG + + A E+I ++L
Sbjct: 169 PERIAQITGPPDRCQHAAEIITDLL 193
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 130 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 186
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGG 315
++I ++ AG G + G ++ VP K GLIIG+GG
Sbjct: 187 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 246
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
ETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 247 ETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 303
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 10/114 (8%)
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
GT ++ A++L++ ++ + G P A G G A Q EI +P K GL+IG+
Sbjct: 2 GTPESVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKAGLVIGK 53
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GGETIK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 54 GGETIKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 105
>gi|360043994|emb|CCD81540.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 527
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 103/189 (54%), Gaps = 24/189 (12%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S SR + +P+ VG +GK G+ I LQ ++ K+QI++ +
Sbjct: 86 PTSNNNSVGSRVVTTETAIPDRYVG--LGKGGEQITQLQNDTQCKVQISQAGTPE----- 138
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ A ++G+ +E+ VP K
Sbjct: 139 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTTPAY-----NSTGSITTIEMMVPGLKA 193
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 194 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPARVEKARQAVL 248
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 249 VLINSRDRP 257
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G +
Sbjct: 180 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPA 238
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 239 RVEKARQAVLVLINSRDRPGGSMHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 289
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ-TVRPST 375
+IK + SGA +++ + P+ +I V G+ ++IE A MI E RP+T
Sbjct: 290 SIKEICRVSGAHVEISKEPPPD---PSIKIFNVRGNRQEIEQAIRMISERAGIPMTRPAT 346
Query: 376 LSGGF 380
+G
Sbjct: 347 TTGAV 351
>gi|256078999|ref|XP_002575779.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043990|emb|CCD81536.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 334
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S SR + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 87 PTSNNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 141
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ A ++G+ +E+ VP K
Sbjct: 142 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTTPA-----YNSTGSITTIEMMVPGLKA 196
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 197 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPARVEKARQAVL 251
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 252 VLINSRDRP 260
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 28/168 (16%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G +
Sbjct: 183 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPA 241
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 242 RVEKARQAVLVLINSRDRPGGSMHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 292
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKE-------RIVRVTGDMRQIE 357
+IK + SGA +++ SKE +I V G+ ++IE
Sbjct: 293 SIKEICRVSGAHVEI----------SKEPPPDPSIKIFNVRGNRQEIE 330
>gi|257205944|emb|CAX82623.1| putative KH-type splicing regulatory protein [Schistosoma
japonicum]
Length = 513
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 104/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S R + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 64 PTSNNNSAGPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 118
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ T ++G+ +E+ VP K
Sbjct: 119 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTT-----TTYNSTGSITTIEMMVPGLKA 173
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 174 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPSRVEKARQAVL 228
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 229 VLINSRDRP 237
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G S
Sbjct: 160 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPS 218
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 219 RVEKARQAVLVLINSRDRPGGSIHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 269
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ-TVRPST 375
+IK + SGA +++ + P+ +I V G+ ++IE A MI E RP+T
Sbjct: 270 SIKEICRVSGAHVEISKEPPPD---PSIKIFNVRGNRQEIEQAIRMISERAGIPMTRPAT 326
Query: 376 LSGGF 380
+G
Sbjct: 327 TTGAV 331
>gi|257206622|emb|CAX82939.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 104/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDSTMSRKIE----VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S R + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 86 PTSNNNSAGPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 140
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ T ++G+ +E+ VP K
Sbjct: 141 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTT-----TTYNSTGSITTIEMMVPGLKA 195
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 196 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPSRVEKARQAVL 250
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 251 VLINSRDRP 259
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G S
Sbjct: 182 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPS 240
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 241 RVEKARQAVLVLINSRDRPGGSIHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 291
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ-TVRPST 375
+IK + SGA +++ + P+ +I V G+ ++IE A MI E RP+T
Sbjct: 292 SIKEICRVSGAHVEISKEPPPD---PSIKIFNVRGNRQEIEQAIRMISERAGIPMTRPAT 348
Query: 376 LSGGF 380
+G
Sbjct: 349 TTGAV 353
>gi|71997385|ref|NP_001023001.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
gi|373218579|emb|CCD61630.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
Length = 510
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 31/208 (14%)
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK----IQITR 237
QV++ +++ ++ ++ +P +K+G++IGK G+TIR +Q SG + +Q T
Sbjct: 73 QVINRNQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETT 132
Query: 238 DADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR------------- 284
A P +P+ +IG+ + I+ A+ L++ ++ G+ L+ R
Sbjct: 133 TATGQP----KPLRMIGSPAAIETAKALVHNIMNNTQ--GNAPLLQRAPHQPSGQFGGGY 186
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
G AQA G E+ VP G+IIG+GGE IK L +G +IQ P P S++
Sbjct: 187 GAQEAQAKG-----EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPN---SED 238
Query: 345 RIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
RI + G QI A E I E++++ ++
Sbjct: 239 RIAVIMGTRDQIYRATERITEIVNRAIK 266
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP VG++IGK G IR +Q SG ++Q+ D D R I G + A ++
Sbjct: 13 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQM--DPDHQSVNGFRNCTIEGPPDQVAVARQM 70
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I VI G P A G T E+ +P +K+GL+IG+GGETI+ +Q +S
Sbjct: 71 ITQVINRNQTGAQPG-AAPGEVTE---------EMLIPADKIGLVIGKGGETIRIVQEQS 120
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G R + Q G + + +R+ G IE A+ ++ +++ T
Sbjct: 121 GLRNCNVVQETTTATG-QPKPLRMIGSPAAIETAKALVHNIMNNT 164
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP G++IGK G+ I+ L +G KIQ D +P++ R I+GT I +A
Sbjct: 196 EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQF--KPDTNPNSEDRIAVIMGTRDQIYRA 253
Query: 263 EKLINAVIAEA-DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
+ I ++ A G+P RG A G + + VP K GL+IG+GGE IK +
Sbjct: 254 TERITEIVNRAIKNNGAPQ--DRGSAGTVLPGQSI-FYMHVPAGKCGLVIGKGGENIKQI 310
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ +GA L P E E++ + G QI A +++
Sbjct: 311 ERETGATCGLAPA--AEQKNEDEKVFEIKGSQLQIHHASHLVR 351
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
+ +S + P+ ++ K+ +P+ G +IGK G TI LQ +GA I++++ D P
Sbjct: 114 IGHSYYNTPNLLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 173
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIK 301
R + GT ++ I + E + V L T A+Q ++
Sbjct: 174 GTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 233
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+ A
Sbjct: 234 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVS 291
Query: 362 MI 363
I
Sbjct: 292 AI 293
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 492 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 547
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
G++ R V +TG + AQ +I + + QT+ S G
Sbjct: 548 --GTRNRRVTITGSPTNTQAAQYLISQRVFQTLLFSMALG 585
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ +N A
Sbjct: 507 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPTNTQAA 566
Query: 263 EKLIN 267
+ LI+
Sbjct: 567 QYLIS 571
>gi|324518607|gb|ADY47153.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 384
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA
Sbjct: 12 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQT--TPDRCAVIQGTTEQIAKA 69
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ AG AE + VP K GL+IG+GGETIK +
Sbjct: 70 TQFISELVNKSGAGS----------------GAEIFYMHVPANKTGLVIGKGGETIKQIC 113
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L + P S E++ + G QI AQ +I+
Sbjct: 114 AESGAHVELSREPPPN---SYEKVFIIKGTPYQIHHAQHIIR 152
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E+ VP VG+IIG+GGETIK L SGA+IQ P E + +R + G QI
Sbjct: 12 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPD---EDQTTPDRCAVIQGTTEQIAK 68
Query: 359 AQEMIKEVLSQT 370
A + I E+++++
Sbjct: 69 ATQFISELVNKS 80
>gi|390335391|ref|XP_003724135.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 695
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 19/162 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VPN VG++IG+ G I LQ SG IQI A + + R V + GT + A+ L
Sbjct: 130 VPNKMVGLIIGRQGQQISSLQSESGCNIQI---APENGISGDRQVTLTGTPEAVMHAKSL 186
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I ++ +A + +A G V++ +P KVGL+IG+GGETIK LQ ++
Sbjct: 187 ILDIVNKA-------------SQNEAEGNMT-VDMLIPATKVGLVIGKGGETIKQLQEQA 232
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
G R+ +I Q P G ++ +R++GD ++IE A+ ++ EV+
Sbjct: 233 GVRMVMI-QEGPVATG-MDKPLRISGDSQKIEEAKRLVSEVM 272
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +P KVG++IGK G+TI+ LQ +G ++ + ++ +P+ I G I
Sbjct: 203 MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQEGPV-ATGMDKPLRISGDSQKI 261
Query: 260 DKAEKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++A++L++ V+ A D + +RG ++ VP VG++IGRGG+
Sbjct: 262 EEAKRLVSEVMENAKNNDRSSGDNFYSRG---------GPHKDVIVPKHAVGMVIGRGGD 312
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLS 368
IK +Q ++ AR+Q P GD ER+ +TG + +A+ M+ ++++
Sbjct: 313 MIKRIQEQTKARVQFKP-----GDRDAPERVALITGSAESVSMAESMVNDLVA 360
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 169 EEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMS----RKIEVPNNKVGVLIGKAGDTIRY 224
+ + +E + + +V++N+K++D SS D+ + + VP + VG++IG+ GD I+
Sbjct: 257 DSQKIEEAKRLVSEVMENAKNNDRSSGDNFYSRGGPHKDVIVPKHAVGMVIGRGGDMIKR 316
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+Q + A++Q D A R I G+ ++ AE ++N ++A A
Sbjct: 317 IQEQTKARVQFK---PGDRDAPERVALITGSAESVSMAESMVNDLVANA 362
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E VPN+ VGLIIGR G+ I LQ+ SG IQ+ P++ GD R V +TG +
Sbjct: 127 EFFVPNKMVGLIIGRQGQQISSLQSESGCNIQIAPENGISGD----RQVTLTGTPEAVMH 182
Query: 359 AQEMIKEVLSQ 369
A+ +I +++++
Sbjct: 183 AKSLILDIVNK 193
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
+VP K GL+IGRGGE I+ + +S A +++ P G ++I ++GD QI+ A+
Sbjct: 431 RVPAGKCGLVIGRGGENIRAIMQQSRAHVEISHGQHPPG----QKIFLISGDPEQIDYAR 486
Query: 361 EMIKE 365
+I E
Sbjct: 487 SLIDE 491
>gi|226477992|emb|CAX72689.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 105/189 (55%), Gaps = 22/189 (11%)
Query: 192 PSSTDDS----TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S ++ + +P+ VG++IGK G+ I LQ ++ K+QI++ +
Sbjct: 86 PTSNNNSAGPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQAGTPE----- 140
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + GT ID A+++I +I A G+P+ T ++G+ +E+ VP K
Sbjct: 141 RTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTT-----TTYNSTGSITTIEMMVPGLKA 195
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++ +
Sbjct: 196 GLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPSRVEKARQAVL 250
Query: 365 EVLSQTVRP 373
+++ RP
Sbjct: 251 VLINSRDRP 259
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G S
Sbjct: 182 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPS 240
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 241 RVEKARQAVLVLINSRDRPGGSIHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 291
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ-TVRPST 375
+IK + SGA +++ + P+ +I V G+ ++IE A MI E RP+T
Sbjct: 292 SIKEICRVSGAHVEISKEPPPD---PSIKIFNVRGNRQEIEQAIRMISERAGIPMTRPAT 348
Query: 376 LSGGF 380
+G
Sbjct: 349 TTGAV 353
>gi|390335395|ref|XP_003724137.1| PREDICTED: far upstream element-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 689
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 19/162 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VPN VG++IG+ G I LQ SG IQI A + + R V + GT + A+ L
Sbjct: 144 VPNKMVGLIIGRQGQQISSLQSESGCNIQI---APENGISGDRQVTLTGTPEAVMHAKSL 200
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I ++ +A + +A G V++ +P KVGL+IG+GGETIK LQ ++
Sbjct: 201 ILDIVNKA-------------SQNEAEGNMT-VDMLIPATKVGLVIGKGGETIKQLQEQA 246
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
G R+ +I Q P G ++ +R++GD ++IE A+ ++ EV+
Sbjct: 247 GVRMVMI-QEGPVATG-MDKPLRISGDSQKIEEAKRLVSEVM 286
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +P KVG++IGK G+TI+ LQ +G ++ + ++ +P+ I G I
Sbjct: 217 MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQEGPV-ATGMDKPLRISGDSQKI 275
Query: 260 DKAEKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++A++L++ V+ A D + +RG ++ VP VG++IGRGG+
Sbjct: 276 EEAKRLVSEVMENAKNNDRSSGDNFYSRG---------GPHKDVIVPKHAVGMVIGRGGD 326
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLS 368
IK +Q ++ AR+Q P GD ER+ +TG + +A+ M+ ++++
Sbjct: 327 MIKRIQEQTKARVQFKP-----GDRDAPERVALITGSAESVSMAESMVNDLVA 374
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 169 EEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMS----RKIEVPNNKVGVLIGKAGDTIRY 224
+ + +E + + +V++N+K++D SS D+ + + VP + VG++IG+ GD I+
Sbjct: 271 DSQKIEEAKRLVSEVMENAKNNDRSSGDNFYSRGGPHKDVIVPKHAVGMVIGRGGDMIKR 330
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+Q + A++Q D A R I G+ ++ AE ++N ++A A
Sbjct: 331 IQEQTKARVQFK---PGDRDAPERVALITGSAESVSMAESMVNDLVANA 376
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E VPN+ VGLIIGR G+ I LQ+ SG IQ+ P++ GD R V +TG +
Sbjct: 141 EFFVPNKMVGLIIGRQGQQISSLQSESGCNIQIAPENGISGD----RQVTLTGTPEAVMH 196
Query: 359 AQEMIKEVLSQ 369
A+ +I +++++
Sbjct: 197 AKSLILDIVNK 207
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
+VP K GL+IGRGGE I+ + +S A +++ P G ++I ++GD QI+ A+
Sbjct: 445 RVPAGKCGLVIGRGGENIRAIMQQSRAHVEISHGQHPPG----QKIFLISGDPEQIDYAR 500
Query: 361 EMIKE 365
+I E
Sbjct: 501 SLIDE 505
>gi|402084416|gb|EJT79434.1| hypothetical protein GGTG_04518 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 589
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT +A
Sbjct: 310 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGTHETSMRA 367
Query: 263 EKLINAVI-------AEADAGGSPSLVARGLATAQASGAAEQV-------EIKVPNEKVG 308
+ LI ++ +A GG P RG Q I VP++ VG
Sbjct: 368 KNLIMEIVESDTRNGGQAAPGGPPHGAPRGHRGDQGGMGGGMGGGDRINDSIYVPSDAVG 427
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+IIG+GGETI+ +Q+ +G +I + P ER + + G IE A+ I++ +
Sbjct: 428 MIIGKGGETIREMQSSTGCKINVSQSSGPN---ETEREIGLVGSRDSIERAKRAIEDKV- 483
Query: 369 QTVR 372
+TVR
Sbjct: 484 ETVR 487
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 35/232 (15%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
++ P DD++ + +IE + VG++IG+ G+ +R ++ ++ ++Q + +D
Sbjct: 193 ARERSPLRGDDNSETMQIE--GSLVGLIIGRQGENLRRIEGDTQCRVQFLPASASD--GD 248
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG-------------LATAQASG 293
R +I G +A IN +I D+G +P + RG A +
Sbjct: 249 HRLCKITGPPPRRAEARAAINRIID--DSGMTP--LNRGGFDRGGRAERGGAGAMVEPKE 304
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDM 353
E ++I VP+ VGLIIGRGGETI+ LQ RSG I ++ + + R V + G
Sbjct: 305 GEECLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGTH 361
Query: 354 RQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQ 405
A+ +I E++ R +GG QA P GPP PRG Q
Sbjct: 362 ETSMRAKNLIMEIVESDTR----NGG---QA----APGGPPHGAPRGHRGDQ 402
>gi|159476646|ref|XP_001696422.1| C1, subunit of the circadian RNA-binding protein CHLAMY 1
[Chlamydomonas reinhardtii]
gi|158282647|gb|EDP08399.1| C1, subunit of the circadian RNA-binding protein CHLAMY 1
[Chlamydomonas reinhardtii]
Length = 511
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I P +KVG +IG+AG TIR L+ ++G +IQ+ A D +PV I G +++A+
Sbjct: 126 IMCPPDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPGD-----KPVTISGRADEVERAK 180
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+ + +I+ G A A G A++ ++ P VG +IGRGGETI+ LQ
Sbjct: 181 RQVLDLIS-----------GHGSDAAPAPGEAQKT-LECPQGIVGRVIGRGGETIRTLQQ 228
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
SGA I L+ Q PEG R + ++G ++ A M++E++
Sbjct: 229 ASGAHI-LVNQDFPEG---AARQITISGSQDAVDRAASMVQELI 268
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+ +E P VG +IG+ G+TIR LQ SGA I + +D P A R + I G+ +D+
Sbjct: 203 KTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDF---PEGAARQITISGSQDAVDR 259
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A ++ +I A S + G+ + + ++ P VG IIG+GGETIK L
Sbjct: 260 AASMVQELIGGEHANTSQVVQRFGVGSTEV--------LECPKTMVGRIIGKGGETIKDL 311
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
Q R A IQ+ +P V +TG I A+ I++++ T
Sbjct: 312 QKRFNASIQIDQSAMPCK-------VTITGPSHTIASARRAIEDLIRST 353
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 189 SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATR 248
S P T++ K+ +P+ G +IGK G TI LQ +GA I++++ D P R
Sbjct: 137 SVSPPKTEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 196
Query: 249 PVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAEQVEIKVPNEK 306
+ GT ++ I + E + V L T A+Q ++ VPN
Sbjct: 197 VCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNST 256
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 257 AGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 311
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 510 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 565
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 566 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 601
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 525 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 584
Query: 263 EKLIN 267
+ LI+
Sbjct: 585 QYLIS 589
>gi|85091498|ref|XP_958931.1| hypothetical protein NCU09352 [Neurospora crassa OR74A]
gi|28920323|gb|EAA29695.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 579
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ S ++Q + P RP +I G + ++A+
Sbjct: 219 IQIESSLVGLIIGRQGENLRRVEGESRCRVQFV--PPSSPTEQYRPCKITGPRAQREEAK 276
Query: 264 KLINAVIAEADAGGS-------PSLVARGLATAQ--ASGAAEQVEIKVPNEKVGLIIGRG 314
++IN +I ++ GS P RG + A + ++I VP+ VGLIIGRG
Sbjct: 277 EMINRIIRDSGMRGSAPADRPAPRDSGRGGSAAPPPLKEGEDSLQIMVPDRTVGLIIGRG 336
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GETI+ LQ RSG I ++ ++ + R V + G + A+E+I E++ R +
Sbjct: 337 GETIRDLQERSGCHINIVGEN---KSVNGLRPVNLIGTPAAAKTAKELILEIVDSDSRNA 393
Query: 375 TLSGG 379
+ GG
Sbjct: 394 SNPGG 398
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG I I + RPV +IGT +
Sbjct: 319 SLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GENKSVNGLRPVNLIGTPAAAK 376
Query: 261 KAEKLINAVIAE-----ADAGGSPSLVARGLATAQASGAAEQVE--IKVPNEKVGLIIGR 313
A++LI ++ ++ GG+ + G ++ I VP+E VG+IIG+
Sbjct: 377 TAKELILEIVDSDSRNASNPGGNRPPRGDNMGGGGGGGGYDKQNDSIFVPSEAVGMIIGK 436
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
GGETI+ +Q +G +I + G G ER + + G I A+ I++
Sbjct: 437 GGETIREMQNTTGCKINV---SQSSGAGETEREIGLVGTREAINRAKRAIED 485
>gi|444727564|gb|ELW68050.1| Far upstream element-binding protein 1 [Tupaia chinensis]
Length = 587
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 24/205 (11%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 98 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 152
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +G K+ + +D + A +P+ I G + +A++++ +I D GG +
Sbjct: 153 QLQERAGVKMVMIQDGPQN-TGADKPLRITGDPYKVQQAKEMVLELIR--DQGGFREVRN 209
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 210 E---YGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 261
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 262 PDRIAQITGPPDRCQHAAEIITDLL 286
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 223 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPD---RIAQITGPPDRCQHAA 279
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRG- 314
++I ++ AG G + G ++ VP K GLIIG+G
Sbjct: 280 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGR 339
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GETIK + +SGARI+L P D ++ + G +QI+ A+++I+E + V P
Sbjct: 340 GETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEEKIGGPVNP 397
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 10/120 (8%)
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R + GT ++ A++L++ ++ + G P A G G A Q EI +P K
Sbjct: 89 RSCMLTGTPESVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKA 140
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GL+IG+GGETIK LQ R+G ++ +I Q P+ G+ ++ +R+TGD +++ A+EM+ E++
Sbjct: 141 GLVIGKGGETIKQLQERAGVKMVMI-QDGPQNTGA-DKPLRITGDPYKVQQAKEMVLELI 198
>gi|219116252|ref|XP_002178921.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409688|gb|EEC49619.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 699
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 18/186 (9%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-TLSN 258
+ +I VP VG +IG+ G+ I +Q +G K+QI ++ + P TR + + G T +
Sbjct: 249 LDDEILVPTGVVGFIIGRGGENITAMQAQTGVKVQIQKEHELVPGQTTRTILLQGATQES 308
Query: 259 IDKAEKLINAVIAEA----DAGGSPSLVARGLA-------TAQASGAAEQ-VEIKVPNEK 306
ID +++I A + E +A S A GL A A Q VE++VP+
Sbjct: 309 IDACKRIIEAKVQERVRSYNANQSSLQGATGLGGSGKDPKVEMALAAGHQLVEVQVPDAD 368
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ-IEIAQEMIKE 365
VGLIIG+ G TIK +Q +GA +Q +P +P G R++++T R+ E A+ M++E
Sbjct: 369 VGLIIGKMGATIKHIQATTGAAVQ-VPHAVP---GEATRLLQITHPSREGAEQAKRMVQE 424
Query: 366 VLSQTV 371
+L +
Sbjct: 425 LLDSKI 430
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 26/182 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA----ATRPVEIIG-TLS 257
+++VP+ VG++IGK G TI+++Q +GA +Q+ PHA ATR ++I +
Sbjct: 361 EVQVPDADVGLIIGKMGATIKHIQATTGAAVQV-------PHAVPGEATRLLQITHPSRE 413
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++A++++ ++ S + A +Q S VE+ +P+ VGL IGR G
Sbjct: 414 GAEQAKRMVQELL------DSKIHHQQNEAPSQTS-----VEVNIPDRDVGLCIGRQGCV 462
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLS 377
I+ +Q+ + RIQ+ Q +P G R+ VTG A+ M++ + + LS
Sbjct: 463 IRHMQSVTNTRIQIPSQPMP---GHTYRVATVTGTPEGCAEAKAMMERISHEQSSAGVLS 519
Query: 378 GG 379
G
Sbjct: 520 GA 521
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQH--LPEGDGSKERIVRVTGDMRQ- 355
EI VP VG IIGRGGE I +Q ++G ++Q+ +H +P G R + + G ++
Sbjct: 252 EILVPTGVVGFIIGRGGENITAMQAQTGVKVQIQKEHELVP---GQTTRTILLQGATQES 308
Query: 356 IEIAQEMIKEVLSQTVR 372
I+ + +I+ + + VR
Sbjct: 309 IDACKRIIEAKVQERVR 325
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 98/168 (58%), Gaps = 10/168 (5%)
Query: 204 IEVPNNKVGV--LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+EVP++ VG+ +IG+ G+ I +Q + ++Q++ ++D + R + G+ ++D+
Sbjct: 73 MEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQMSPESDGN---NVRQCTLQGSKMSVDR 129
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGLIIGRGGETIK 319
A +IN VIA A P+ G Q+ E+ +P K GL+IG+GGETIK
Sbjct: 130 ARAMINEVIARAGNRPPPNRAGH-FDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIK 188
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+Q ++G ++ +I ++ + G + + +R+TGD ++E A+ M++E+L
Sbjct: 189 NIQEQTGVKMVMIQEN--QESGGQPKPLRITGDPEKVENARRMVEEIL 234
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D A R I GT I KA
Sbjct: 262 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDNDQTAQERCAVIQGTAEQIAKA 319
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ A +G AE + VP+ K GL+IG+GGETIK +
Sbjct: 320 TQFISELVKKSGA----------------AGGAEMFYMHVPSNKTGLVIGKGGETIKQIC 363
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L P + E++ + G QI AQ +I+
Sbjct: 364 AESGAHVELSRDPPPN---ASEKVFIIKGTPYQIHHAQHIIR 402
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+++++ +P K G++IGK G+TI+ +Q +G K+ + ++ + + +P+ I G +
Sbjct: 165 ITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMIQE-NQESGGQPKPLRITGDPEKV 223
Query: 260 DKAEKLINAVIAEAD-----AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+ A +++ ++ + G P + G++ Q S E+ VP VG+IIG+G
Sbjct: 224 ENARRMVEEILQSREDHPPGHFGFPG--SFGMSGGQRSIG----EVIVPRASVGMIIGKG 277
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
GETIK L SGA+IQ P + ++ER + G QI A + I E++ ++
Sbjct: 278 GETIKRLAAESGAKIQFKPDN---DQTAQERCAVIQGTAEQIAKATQFISELVKKS 330
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 300 IKVPNEKVGL--IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++VP+ VGL +IGRGGE I +Q+++ R+Q+ PE DG+ R + G ++
Sbjct: 73 MEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQM----SPESDGNNVRQCTLQGSKMSVD 128
Query: 358 IAQEMIKEVLSQ 369
A+ MI EV+++
Sbjct: 129 RARAMINEVIAR 140
>gi|195123153|ref|XP_002006073.1| GI18753 [Drosophila mojavensis]
gi|193911141|gb|EDW10008.1| GI18753 [Drosophila mojavensis]
Length = 828
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 98/177 (55%), Gaps = 18/177 (10%)
Query: 198 STMSRKIEVPNNKVGVLIGKAG-DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
ST ++ +P + V +G++G DT+ +L+ SGAK+++ +D + R + + GT
Sbjct: 120 STCEEQVRIPESIVNAFVGRSGSDTLSHLEAESGAKLELMQDQE-------RVITLRGTR 172
Query: 257 SNIDKAEKLINAVIAEADAGGSPS-LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+ K +++ ++ G+ L+ + G EI +P KVGL+IG+GG
Sbjct: 173 ESCTKGREMLQQMVNRNGGNGTCEVLLTINMPPPGPGGYPPYQEIMIPGAKVGLVIGKGG 232
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
+TIK LQ ++GAR+ +I DG + ++ R++G +++E A++M+ ++++Q
Sbjct: 233 DTIKQLQEKTGARMIIIQ------DGPNQEVIKPLRISGVPQKVEHAKQMVLDLIAQ 283
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GA++ I +D +P+ I G ++
Sbjct: 215 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGARMIIIQDGP--NQEVIKPLRISGVPQKVEH 272
Query: 262 AEKLINAVIAEADA-------------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVG 308
A++++ +IA+ DA G +G E VE+ VP VG
Sbjct: 273 AKQMVLDLIAQKDALAMQQQGGRGGGGGSGGGGSEQGFNNFNNGNGGESVEVFVPKIAVG 332
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++IG+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I ++
Sbjct: 333 VVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTIDGLIE 389
Query: 369 QTVR 372
++
Sbjct: 390 NVMQ 393
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 35/198 (17%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT ++
Sbjct: 321 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVE 378
Query: 261 KAEKLINAVIAEA------------------------DAGGSPSLVARGLATAQASGAAE 296
A++ I+ +I + S G A G E
Sbjct: 379 DAKRTIDGLIENVMQRNGMNRNGNGGGGGNGGGGSQGGGDSNNSNYGYGYGVNHAQGGRE 438
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDM 353
++ VP K G++IGRGGETIK + +SGA ++ + + S E++ + G
Sbjct: 439 EITFLVPASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTT 492
Query: 354 RQIEIAQEMIKEVLSQTV 371
Q+E A++MI E ++ +
Sbjct: 493 DQVESARQMISEKINMEL 510
>gi|452848007|gb|EME49939.1| hypothetical protein DOTSEDRAFT_68678 [Dothistroma septosporum
NZE10]
Length = 545
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I V ++ VG++IG+ G+ +R ++ +GA++Q + +D H A R I G+ + A+
Sbjct: 148 IRVKSSLVGLIIGRNGENLRKVEAETGARVQFIQASDK--HQAERQCTISGSTRARENAK 205
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE-----------QVEIKVPNEKVGLIIG 312
I +I E GGS RG T G A+ +I VP++ VGLIIG
Sbjct: 206 TAIFTIIEEN--GGSTPSQDRGAYTPGMPGRAKVNLPALREGEASSQIMVPDKTVGLIIG 263
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
RGGETIK LQ +SG + ++ ++ + R V + G R +A+E+I E++ R
Sbjct: 264 RGGETIKELQEKSGCHVNIVGENKSV---NGLRPVNLIGSERATALAKELILEIVESDSR 320
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 40/210 (19%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TI+ LQ SG + I + RPV +IG+
Sbjct: 248 SSQIMVPDKTVGLIIGRGGETIKELQEKSGCHVNIV--GENKSVNGLRPVNLIGSERATA 305
Query: 261 KAEKLINAVIAEAD---------------AGGSPSLVARGL-------------ATAQAS 292
A++LI ++ E+D A + RG + +
Sbjct: 306 LAKELILEIV-ESDSRDQRGGGGGGGGGGANTVDQMRDRGYQNDSRGGRGGGGGGSGGVA 364
Query: 293 GAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRV 349
G + VE I+VP+ VG+IIG+GGETIK +Q SG +I + PQH P+ R + +
Sbjct: 365 GGRDHVEKTIQVPSSAVGMIIGKGGETIKDMQRTSGCKINVNQPQH-PD----HHRNIDL 419
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPSTLSGG 379
G RQ+E A+ +I E + +TVR + G
Sbjct: 420 AGTARQMEEAERIIWEKV-ETVRQRDAAAG 448
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+ + I+VP++ VG++IGK G+TI+ +Q SG KI + + D H R +++ GT +
Sbjct: 370 VEKTIQVPSSAVGMIIGKGGETIKDMQRTSGCKINVNQPQHPDHH---RNIDLAGTARQM 426
Query: 260 DKAEKLI 266
++AE++I
Sbjct: 427 EEAERII 433
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
G A Q G E I+V + VGLIIGR GE ++ ++ +GAR+Q I E
Sbjct: 133 GQAGNQRGGDTEIETIRVKSSLVGLIIGRNGENLRKVEAETGARVQFIQ---ASDKHQAE 189
Query: 345 RIVRVTGDMRQIEIAQEMIKEVLSQ 369
R ++G R E A+ I ++ +
Sbjct: 190 RQCTISGSTRARENAKTAIFTIIEE 214
>gi|224012942|ref|XP_002295123.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969085|gb|EED87427.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 728
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 12/177 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-TLSNIDKA 262
++VP+ VG++IGK G IR +Q SGA +QI + ADA + + R V I TL + A
Sbjct: 396 VQVPDADVGLIIGKQGAQIRTIQDTSGANVQIPQVADAG-NPSVRTVNITCPTLEGAEFA 454
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE-QVEIKVPNEKVGLIIGRGGETIKGL 321
+++I V+A S + V G G + +++ P++ VG+IIGRGG IK +
Sbjct: 455 KQMIEEVLA------SKAQVGGGGMGGGGGGGGDVTIQVNCPDKDVGMIIGRGGCVIKQM 508
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
QT + RIQ+ P P GS R++ V+G + Q+MI+ ++++ + +SG
Sbjct: 509 QTTTRCRIQIPPTAPP---GSMYRVISVSGTAAGCQQVQQMIETIVAEQSSQAVMSG 562
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 21/185 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-TLSNIDK 261
KI VPN VG +IG+ G++I +Q SG ++QI ++ + P R + + +I +
Sbjct: 281 KIGVPNGMVGFIIGRGGESITSMQRRSGCRVQIQKEHEMAPGTTQRVITLTAPNAESIAQ 340
Query: 262 AEKLINAVIAE-----------------ADAGGSPSLVARGLATAQASGAAEQVEIKVPN 304
+I ++I E A GGS + L + + + ++VP+
Sbjct: 341 CRAIIESMIVERMQQTGATTAALASSSTALGGGSSASSQMALLQKALNEGQKHITVQVPD 400
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG-DMRQIEIAQEMI 363
VGLIIG+ G I+ +Q SGA +Q IPQ G+ S R V +T + E A++MI
Sbjct: 401 ADVGLIIGKQGAQIRTIQDTSGANVQ-IPQVADAGNPSV-RTVNITCPTLEGAEFAKQMI 458
Query: 364 KEVLS 368
+EVL+
Sbjct: 459 EEVLA 463
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 62/238 (26%)
Query: 194 STDDSTMSRKIEVPNNK------VGVLIGKAGDTIRYLQYNSGAKIQITRD--------- 238
S D +K+ +P+++ VG+LIG G R L SG ++I+
Sbjct: 120 SADSGKTVKKLWIPSDRNPGYNYVGLLIGPGGSKQRELVAASGGDVKISIRGKGSHSKPG 179
Query: 239 ADADPHAATRPVEII--GTLSNIDKAEKLINAVIAEADA--------------------- 275
++A P P+ ++ G+ + + AEKL+ ++ +++
Sbjct: 180 SEAVPGMPEEPLHVLLEGSATCVANAEKLVRELLEDSEVADKEKARQLSSLGGEDGDTAT 239
Query: 276 -GGSPSLVARGLA--TAQASG---------------AAEQVEIKVPNEKVGLIIGRGGET 317
GG+ S + +A Q SG + +I VPN VG IIGRGGE+
Sbjct: 240 KGGASSYTPKPVAQILGQMSGNTALSAYGPNGGGGEEQVEEKIGVPNGMVGFIIGRGGES 299
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIE-IAQEMIKEVLSQT 370
I +Q RSG R+Q+ +H G+ +R++ +T + Q I + MI E + QT
Sbjct: 300 ITSMQRRSGCRVQIQKEH-EMAPGTTQRVITLTAPNAESIAQCRAIIESMIVERMQQT 356
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ ++ P+ VG++IG+ G I+ +Q + +IQI A P + R + + GT +
Sbjct: 483 VTIQVNCPDKDVGMIIGRGGCVIKQMQTTTRCRIQI--PPTAPPGSMYRVISVSGTAAGC 540
Query: 260 DKAEKLINAVIAE 272
+ +++I ++AE
Sbjct: 541 QQVQQMIETIVAE 553
>gi|297592144|gb|ADI46928.1| CRB1m [Volvox carteri f. nagariensis]
Length = 499
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 32/253 (12%)
Query: 169 EEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
+ VE + V Q ++ S P T + + +E P VG +IG+ G+TIR LQ
Sbjct: 175 RRDDVENAKRVVQDLICGSNEAVPPGTGE--VQETVECPPGIVGRVIGRGGETIRTLQQA 232
Query: 229 SGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT 288
SGA I + +D P R + I G + +A +++ +I + D G + S++ R
Sbjct: 233 SGAHILVNQDF---PDGVPRQIVITGAQDAVQRATSMVSELI-QGDQGNTQSIIQR---- 284
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVR 348
G+ E VE P VG +IG+GGETIK LQ R A IQ+ GS +
Sbjct: 285 -FGVGSTEVVE--CPKAMVGRVIGKGGETIKDLQKRFSASIQI-------DQGSTPCKIT 334
Query: 349 VTGDMRQIEIAQEMIKEVL-SQTVRPSTLSGG------FNQQ-AYRPRVPTGPP-QWGPR 399
+TG + + A+ I++++ + TV+P SGG +N A++P GP +GP
Sbjct: 335 ITGPAQTVSSARRAIEDLIRAATVQP---SGGTRSAPPYNTSYAHQPFNGNGPSGAYGPY 391
Query: 400 GSHPSQPMAYDYP 412
G + P AY P
Sbjct: 392 GGYNLPPTAYTAP 404
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D + K+ +P+ G +IGK G TI LQ +GA I++++ D P R V I G+
Sbjct: 62 EDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGS 121
Query: 256 LSNIDKAEKLINAVIAEADA--GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
++ K + I++A SPS + A+QV+I VPN GLIIG+
Sbjct: 122 EDSLKSVHKFLMEKISQAPQPPAKSPS------EQNANNNRAKQVKIVVPNSTAGLIIGK 175
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
GG TIK + ++G+R+Q I Q G ER++ +TG+ Q + A I
Sbjct: 176 GGATIKFIMEQTGSRVQ-ISQKATNGINLPERVITITGEPEQNDKACAFI 224
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
D S ++EVP N VG ++GK G T+ Q SGA+IQI++ + P R V I GT
Sbjct: 423 DGSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGT 482
Query: 256 LSNIDKAEKLINAVIAEADA 275
+ A+ L+ A IA+ +A
Sbjct: 483 PAATQTAQYLVRARIAQEEA 502
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G TI+++ +G+++QI++ A + R + I G DKA
Sbjct: 161 KIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLPERVITITGEPEQNDKA 220
Query: 263 EKLI-NAVIAEADAGGSPSL 281
I N ++ + +G P++
Sbjct: 221 CAFIVNKIVEDPQSGSCPNI 240
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
G+ VE++VP VG I+G+GG+T+ Q SGARIQ I + G+ R V +TG
Sbjct: 424 GSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQ-ISKKGEFTPGTNNRKVTITGT 482
Query: 353 MRQIEIAQEMIKEVLSQ 369
+ AQ +++ ++Q
Sbjct: 483 PAATQTAQYLVRARIAQ 499
>gi|324529261|gb|ADY49000.1| Far upstream element-binding protein 2, partial [Ascaris suum]
Length = 218
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + IEVP++ VG++IG+ G+ I +Q S ++Q++ ++D + R
Sbjct: 26 PSGGAGDVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGN---NMRQCT 82
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ GT +++A+ +I VIA A P+ RG SG Q+ E+ +P K GL
Sbjct: 83 LQGTKMAVERAKSMIQDVIARAGNRPPPN---RGHFDGGMSGGGRQITHEMLIPGAKCGL 139
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I + + G + + +R+ G+ +++ A+ M++++L
Sbjct: 140 VIGKGGETIKNIQEQAGVKMVMIQE--TQESGGQPKPLRIIGEPDKVDTARRMVEDIL 195
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGL+IGRGGE I +Q++S R+Q+ PE DG+ R + G +E A
Sbjct: 38 IEVPDHCVGLVIGRGGEQISQIQSQSNCRVQM----SPESDGNNMRQCTLQGTKMAVERA 93
Query: 360 QEMIKEVLSQ 369
+ MI++V+++
Sbjct: 94 KSMIQDVIAR 103
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
+K S T+D+ + K+ +P+ VG LIGK G+T+R L+ SG ++Q++++ + P
Sbjct: 21 TKKAHVSETEDNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTN 80
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA--RGLATAQASGAAEQVEIKVPN 304
R + G ++++ K +I I E +PS + +G+ ++++ VPN
Sbjct: 81 ERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMER------KNEMKLVVPN 134
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMI 363
G++IG+ G IK ++ ++GA IQ+ P+ E S+ERI+ + + Q E+ + +
Sbjct: 135 TSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAE--QDEVLMDAL 192
Query: 364 KEVLSQT 370
+ VL +
Sbjct: 193 QRVLEKV 199
>gi|358381022|gb|EHK18698.1| hypothetical protein TRIVIDRAFT_125660, partial [Trichoderma virens
Gv29-8]
Length = 527
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ ++ ++Q D P R +I G +
Sbjct: 177 SETIQIESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF---RQCKITGPRARRA 233
Query: 261 KAEKLINAVIAEADAGG------SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+ + IN +I ++ G P ARG A A G + ++I VP+ VGLIIGRG
Sbjct: 234 EVKTAINRIIEDSGMGALNRAQEKPRDPARGGAAALRDGE-DHMQIMVPDRTVGLIIGRG 292
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GETI+ LQ RSG I ++ + + R V + G A++ I E++ R
Sbjct: 293 GETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGSREAAARAKDFIMEIVDSDSRGD 349
Query: 375 TLSGGFNQQAYRPRVPTGPPQ 395
+ G + PR GPP+
Sbjct: 350 GPASGTKKPTSAPR-NDGPPR 369
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 15/173 (8%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG+ +A
Sbjct: 277 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGSREAAARA 334
Query: 263 EKLINAVIAEADAGGSPSLVARGLATA--------QASGAAEQVE--IKVPNEKVGLIIG 312
+ I ++ G P+ + +A SG ++++ I VP++ VG+IIG
Sbjct: 335 KDFIMEIVDSDSRGDGPASGTKKPTSAPRNDGPPRDFSGGSDKINDAIYVPSDAVGMIIG 394
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGETI+ +Q +G +I + P G +R + + G I A++ I E
Sbjct: 395 KGGETIREMQNTTGCKINVAQSSGP---GEVQREIALIGTRESIARAKQAIDE 444
>gi|195335055|ref|XP_002034191.1| GM20025 [Drosophila sechellia]
gi|194126161|gb|EDW48204.1| GM20025 [Drosophila sechellia]
Length = 802
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R + + G
Sbjct: 121 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVIMLRGQR 173
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A L+ + SG EI +P KVGL+IG+GG+
Sbjct: 174 DTVTKGREMIQNMANRAGGRQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 233
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 234 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 283
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 215 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 272
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G E E+ VP VG++I
Sbjct: 273 AKQMVLDLIAQKDAQGQQQGGRGSGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 332
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 333 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 389
Query: 372 R 372
+
Sbjct: 390 Q 390
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 318 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 375
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 376 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 435
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 436 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 489
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 490 QMISEKINMEL 500
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
+K S T+D+ + K+ +P+ VG LIGK G+T+R L+ SG ++Q++++ + P
Sbjct: 21 TKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTN 80
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA--RGLATAQASGAAEQVEIKVPN 304
R + G ++++ K +I I E +PS + +G+ ++++ VPN
Sbjct: 81 ERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMER------KNEMKLVVPN 134
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMI 363
G++IG+ G IK ++ ++GA IQ+ P+ E S+ERI+ + + Q E+ + +
Sbjct: 135 TSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAE--QDEVLMDAL 192
Query: 364 KEVLSQT 370
+ VL +
Sbjct: 193 QRVLEKV 199
>gi|62088904|dbj|BAD92899.1| KH-type splicing regulatory protein (FUSE binding protein 2)
variant [Homo sapiens]
Length = 384
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 171 ESVEPSNVVPQQVVDNSKSDDPSSTDDST------MSRKIEVPNNKVGVLIGKAGDTIRY 224
ESV+ + ++ +V + P D+ ++I +P K G++IGK G+TI+
Sbjct: 17 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQ 76
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ +G K+ + +D + + +P+ IIG + +A +++ ++ E D GG
Sbjct: 77 LQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQACEMVMDILRERDQGGF------ 129
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK- 343
G S +++ VP VG++IGR GE IK +Q +G RIQ + DG+
Sbjct: 130 GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQ-----FKQDDGTGP 184
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
E+I + G + E A +I ++L Q++R
Sbjct: 185 EKIAHIMGPPDRCEHAARIINDLL-QSLR 212
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP + VGV+IG++G+ I+ +Q ++G +IQ +D P + I+G + A
Sbjct: 145 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPE---KIAHIMGPPDRCEHAA 201
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE---------QVEIKVPNEKVGLIIGRG 314
++IN ++ +G G+ ++ +P K GL+IGRG
Sbjct: 202 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 261
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE +K + ++GA +++ Q P GD + + + + G +QI+ A+++I+E +
Sbjct: 262 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFI-IRGSPQQIDHAKQLIEEKI 313
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 14/126 (11%)
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R V + G ++ KA+ +++ +++ GG P A +G + EI +P K
Sbjct: 8 RSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKA 63
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEIAQEMI 363
GL+IG+GGETIK LQ R+G ++ LI DGS+ ++ +R+ GD +++ A EM+
Sbjct: 64 GLVIGKGGETIKQLQERAGVKMILIQ------DGSQNTNVDKPLRIIGDPYKVQQACEMV 117
Query: 364 KEVLSQ 369
++L +
Sbjct: 118 MDILRE 123
>gi|324529633|gb|ADY49026.1| Far upstream element-binding protein 2, partial [Ascaris suum]
Length = 214
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + IEVP++ VG++IG+ G+ I +Q S ++Q++ ++D + R
Sbjct: 26 PSGGAGDVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGN---NMRQCT 82
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ GT +++A+ +I VIA A P+ RG SG Q+ E+ +P K GL
Sbjct: 83 LQGTKMAVERAKSMIQDVIARAGNRPPPN---RGHFDGGMSGGGRQITHEMLIPGAKCGL 139
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I + + G + + +R+ G+ +++ A+ M++++L
Sbjct: 140 VIGKGGETIKNIQEQAGVKMVMIQE--TQESGGQPKPLRIIGEPDKVDTARRMVEDIL 195
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGL+IGRGGE I +Q++S R+Q+ PE DG+ R + G +E A
Sbjct: 38 IEVPDHCVGLVIGRGGEQISQIQSQSNCRVQM----SPESDGNNMRQCTLQGTKMAVERA 93
Query: 360 QEMIKEVLSQ 369
+ MI++V+++
Sbjct: 94 KSMIQDVIAR 103
>gi|397603279|gb|EJK58384.1| hypothetical protein THAOC_21490 [Thalassiosira oceanica]
Length = 689
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 25/179 (13%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+VP+ VG++IGK G I+ +Q SGA IQI + AD D + A R V I T N + AE
Sbjct: 322 CKVPDADVGLVIGKGGMQIKLIQEKSGANIQIPQMADTD-NPAMRTVNI--THQNKEGAE 378
Query: 264 ---KLINAVIAE-ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
+I V+ E A +GG G +++ P+ VG+IIGRGG IK
Sbjct: 379 FAKTMIEEVLKEKAQSGG---------------GGDVTIQVNCPDRDVGMIIGRGGCVIK 423
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
+Q + RIQ+ P P GS+ RI+ V G E ++MI+ ++++ S +SG
Sbjct: 424 QMQNTTRCRIQIPPTAPP---GSQYRIISVVGSRAGTEQVKQMIETIIAEQSSQSVMSG 479
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 16/183 (8%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG---- 254
+ KI +PN VG +IG+ G++I +Q + ++QI ++ + P A R + +
Sbjct: 212 VIEEKIGIPNGVVGYIIGRGGESITSMQRRTNCRVQIQKEHEMAPGTAQRVITLTAASKD 271
Query: 255 -------TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
+ N+ K E+++ + +G + + L A A G A V KVP+ V
Sbjct: 272 SVAACRAIIENMVK-ERMVQSNSISIGSGNNATSQMAQLQKALAEGQA-HVTCKVPDADV 329
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ-IEIAQEMIKEV 366
GL+IG+GG IK +Q +SGA IQ IPQ + + D R V +T ++ E A+ MI+EV
Sbjct: 330 GLVIGKGGMQIKLIQEKSGANIQ-IPQ-MADTDNPAMRTVNITHQNKEGAEFAKTMIEEV 387
Query: 367 LSQ 369
L +
Sbjct: 388 LKE 390
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 43/234 (18%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPN------NKVGVLIGKAGDTIRYLQYNSGAKIQIT-RDA 239
S ++ +D RK+ +P N +G+LIG G R L ++G ++I+ R
Sbjct: 67 SDTNKRHRSDGYECVRKVNIPVEENPGYNYIGLLIGPGGSKQRELVASAGGNVKISIRGK 126
Query: 240 DADPHAAT----RPVEII--GTLSNIDKAEKLINAVIA--------------EADAGGSP 279
++ ++T P+ ++ G+ S +++AEKL+ ++A E G P
Sbjct: 127 GSNKDSSTPGNEEPLHVLLEGSTSCVERAEKLVETLLANPDEEKRRQLSSINEEKGGYVP 186
Query: 280 SLVARGLATAQASGAAE----------QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARI 329
V+ L +S + + +I +PN VG IIGRGGE+I +Q R+ R+
Sbjct: 187 KPVSAILGAGSSSALSIYGPQSGEPVIEEKIGIPNGVVGYIIGRGGESITSMQRRTNCRV 246
Query: 330 QLIPQHLPEGDGSKERIVRVTGDMRQI-----EIAQEMIKEVLSQTVRPSTLSG 378
Q+ +H G+ +R++ +T + I + M+KE + Q+ S SG
Sbjct: 247 QIQKEH-EMAPGTAQRVITLTAASKDSVAACRAIIENMVKERMVQSNSISIGSG 299
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ ++ P+ VG++IG+ G I+ +Q + +IQI A P + R + ++G+ +
Sbjct: 400 VTIQVNCPDRDVGMIIGRGGCVIKQMQNTTRCRIQI--PPTAPPGSQYRIISVVGSRAGT 457
Query: 260 DKAEKLINAVIAE 272
++ +++I +IAE
Sbjct: 458 EQVKQMIETIIAE 470
>gi|40792684|gb|AAR90343.1| circadian RNA-binding protein CHLAMY 1 subunit C1 [Chlamydomonas
reinhardtii]
Length = 488
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I P +KVG +IG+AG TIR L+ ++G +IQ+ A D +PV I G +++A+
Sbjct: 103 IMCPPDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPGD-----KPVTISGRADEVERAK 157
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+ + +I+ G A A G A++ ++ P VG +IGRGGETI+ LQ
Sbjct: 158 RQVLDLIS-----------GHGSDAAPAPGEAQKT-LECPQGIVGRVIGRGGETIRTLQQ 205
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
SGA I L+ Q PEG R + ++G ++ A M++E++
Sbjct: 206 ASGAHI-LVNQDFPEG---AARQITISGSQDAVDRAASMVQELI 245
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
+ +E P VG +IG+ G+TIR LQ SGA I + +D P A R + I G+ +D+
Sbjct: 180 KTLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDF---PEGAARQITISGSQDAVDR 236
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
A ++ +I A S + G+ + + ++ P VG IIG+GGETIK L
Sbjct: 237 AASMVQELIGGEHANTSQVVQRFGVGSTEV--------LECPKTMVGRIIGKGGETIKDL 288
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
Q R A IQ+ +P V +TG I A+ I++++ T
Sbjct: 289 QKRFNASIQIDQSAMPCK-------VTITGPSHTIASARRAIEDLIRST 330
>gi|194756696|ref|XP_001960612.1| GF13443 [Drosophila ananassae]
gi|190621910|gb|EDV37434.1| GF13443 [Drosophila ananassae]
Length = 832
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGK-AGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I VP + G+ A DTI ++Q SGAK+Q+ +D + R + + G
Sbjct: 132 TSCEEQIRVPESAANGFCGRGANDTITHIQAESGAKLQMMQDQE-------RVIMLRGQR 184
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ KA ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 185 DTVTKAREMIQQMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 244
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERI--VRVTGDMRQIEIAQEMIKEVL 367
TIK LQ ++GA++ +I Q P ++E I +R++GD ++IE A++M+ +++
Sbjct: 245 TIKQLQEKTGAKM-IIIQEGP----NQEVIKPLRISGDPQKIEHAKQMVLDLI 292
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 30/193 (15%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + + R I GT ++
Sbjct: 332 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDE--MGDRRCVIQGTRQQVE 389
Query: 261 KAEKLINAVIAEA-------------------DAGGSPSLVARGLATAQASGAAEQVEIK 301
A++ I+ +I S G A G E++
Sbjct: 390 DAKRTIDGLIENVMQRNGMNRNGNGGGGGAQGGGDTGNSNYGYGYGVNHAQGGREEITFL 449
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEI 358
VP K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E
Sbjct: 450 VPASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEA 503
Query: 359 AQEMIKEVLSQTV 371
A++MI E ++ +
Sbjct: 504 ARQMISEKINMEL 516
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I ++ +P+ I G I+
Sbjct: 226 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQEGP--NQEVIKPLRISGDPQKIEH 283
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA-------------EQVEIKVPNEKVG 308
A++++ +IA+ DA A G E VE+ VP VG
Sbjct: 284 AKQMVLDLIAQKDAQAQQQGGRGAGGGGGAGGPGLGYNNFNNGNGGGESVEVFVPKIAVG 343
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++IG+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I ++
Sbjct: 344 VVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTIDGLIE 400
Query: 369 QTVR 372
++
Sbjct: 401 NVMQ 404
>gi|71997383|ref|NP_001023000.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
gi|373218578|emb|CCD61629.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
Length = 557
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 31/190 (16%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK----IQITRDADADPHAATRPVEIIGT 255
++ ++ +P +K+G++IGK G+TIR +Q SG + +Q T A P +P+ +IG+
Sbjct: 138 VTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQP----KPLRMIGS 193
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVAR-------------GLATAQASGAAEQVEIKV 302
+ I+ A+ L++ ++ G+ L+ R G AQA G E+ V
Sbjct: 194 PAAIETAKALVHNIMNNTQ--GNAPLLQRAPHQPSGQFGGGYGAQEAQAKG-----EVIV 246
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
P G+IIG+GGE IK L +G +IQ P P S++RI + G QI A E
Sbjct: 247 PRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPN---SEDRIAVIMGTRDQIYRATER 303
Query: 363 IKEVLSQTVR 372
I E++++ ++
Sbjct: 304 ITEIVNRAIK 313
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 13/185 (7%)
Query: 186 NSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA 245
+S+ D + D ++ VP VG++IGK G IR +Q SG ++Q+ D D
Sbjct: 40 SSEVGDLNMGDSDKITDIYPVPEKVVGLVIGKGGSEIRLIQQTSGCRVQM--DPDHQSVN 97
Query: 246 ATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNE 305
R I G + A ++I VI G P A G + E+ +P +
Sbjct: 98 GFRNCTIEGPPDQVAVARQMITQVINRNQTGAQP---------GAAPGEVTE-EMLIPAD 147
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K+GL+IG+GGETI+ +Q +SG R + Q G + + +R+ G IE A+ ++
Sbjct: 148 KIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATG-QPKPLRMIGSPAAIETAKALVHN 206
Query: 366 VLSQT 370
+++ T
Sbjct: 207 IMNNT 211
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP G++IGK G+ I+ L +G KIQ D +P++ R I+GT I +A
Sbjct: 243 EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQF--KPDTNPNSEDRIAVIMGTRDQIYRA 300
Query: 263 EKLINAVIAEA-DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
+ I ++ A G+P RG A G + + VP K GL+IG+GGE IK +
Sbjct: 301 TERITEIVNRAIKNNGAPQ--DRGSAGTVLPGQSI-FYMHVPAGKCGLVIGKGGENIKQI 357
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
+ +GA L P E E++ + G QI A +++
Sbjct: 358 ERETGATCGLAPA--AEQKNEDEKVFEIKGSQLQIHHASHLVR 398
>gi|358334834|dbj|GAA53260.1| far upstream element-binding protein [Clonorchis sinensis]
Length = 664
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 26/182 (14%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P+ + +S + +P+ VG++IGK G+ I LQ SG K+QI++D R
Sbjct: 122 PNQSTARIVSTETSIPDRYVGLVIGKRGEQITLLQNESGCKVQISQD---------RVCL 172
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGG--SPSLVARGLATAQASGAAEQVEIKVPNEKVGL 309
A++LI +I AD G +P++ +SG +E+ VP K GL
Sbjct: 173 ACRYTIFCRHAKQLIGQIIERADKNGPVTPTVYP-------SSGNVTTIEMMVPGLKAGL 225
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
IIG+ GETIK LQ SG ++ LI Q PE ++ +R+TGD ++E A++ I +
Sbjct: 226 IIGKNGETIKSLQEESGVKMVLIQQSNNPTPE-----DKPLRITGDPARVEKARQAILAL 280
Query: 367 LS 368
++
Sbjct: 281 IN 282
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 30/181 (16%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PSS + +T+ ++ VP K G++IGK G+TI+ LQ SG K+ + + ++ +P +P+
Sbjct: 206 PSSGNVTTI--EMMVPGLKAGLIIGKNGETIKSLQEESGVKMVLIQQSN-NPTPEDKPLR 262
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
I G + ++KA + I A+I D GG E + VP EK GL+I
Sbjct: 263 ITGDPARVEKARQAILALINARDRGGH----------MYGYDGQETTQYAVPAEKAGLVI 312
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE-------RIVRVTGDMRQIEIAQEMIK 364
G+GGE+IK + SGA +++ SKE +I V G+ ++I+ A MI
Sbjct: 313 GKGGESIKEICRVSGAHVEI----------SKEPPPDPTIKIFNVRGNRQEIDQAIRMIS 362
Query: 365 E 365
E
Sbjct: 363 E 363
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D + K+ +P+ G +IGK G TI LQ +GA I++++ D P R V I G+
Sbjct: 62 EDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGS 121
Query: 256 LSNIDKAEKLINAVIAEADA--GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
++ K + I +A SPS + A+QV+I VPN GLIIG+
Sbjct: 122 EDSLKSVHKFLMEKIGQAPRPPAKSPS------EQNANNNRAKQVKIVVPNSTAGLIIGK 175
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
GG TIK + ++G+R+Q I Q G ER++ +TG+ Q + A I
Sbjct: 176 GGATIKFIMEQTGSRVQ-ISQKATSGINLPERVITITGEPEQNDKACAFI 224
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
D S ++EVP N VG ++GK G T+ Q SGA+IQI++ + P R V I GT
Sbjct: 423 DGSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGT 482
Query: 256 LSNIDKAEKLINAVIAEADA 275
+ A+ L+ A IA+ +A
Sbjct: 483 PAATQTAQYLVRARIAQEEA 502
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G TI+++ +G+++QI++ A + + R + I G DKA
Sbjct: 161 KIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATSGINLPERVITITGEPEQNDKA 220
Query: 263 EKLI-NAVIAEADAGGSPSL 281
I N ++ + +G P++
Sbjct: 221 CAFIVNKIVEDPQSGSCPNI 240
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
G+ VE++VP VG I+G+GG+T+ Q SGARIQ I + G+ R V +TG
Sbjct: 424 GSKNVVELEVPENLVGAILGKGGKTLVEFQEYSGARIQ-ISKKGEFTPGTNNRKVTITGT 482
Query: 353 MRQIEIAQEMIKEVLSQ 369
+ AQ +++ ++Q
Sbjct: 483 PAATQTAQYLVRARIAQ 499
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 188 KSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
K + DD+ K+ +P+ G +IGK G T+ LQ +GA I++++ D P +
Sbjct: 34 KRTNIGGNDDNKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSE 93
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR-GLATAQASGAAEQVEIKVPNEK 306
R V I GT+ ++ + + + SP L A+ G +A + A QV+I +PN
Sbjct: 94 RVVLITGTVESLTAVGNFVIEKVRD-----SPQLAAKTGNESAVSQERARQVKIIIPNST 148
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
GLIIG+GG TIK ++G+++Q+ EG ER++ ++G+
Sbjct: 149 AGLIIGKGGATIKAFMEQTGSKLQI--SQKSEGVNLSERVLTISGE 192
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTGDMRQ 355
+EI+VP VG I+G+GG+T+ Q SGARIQ+ +++P G++ R V +TG+
Sbjct: 435 LEIEVPETLVGAILGKGGKTLVEFQQCSGARIQISKKGEYVP---GTRNRKVIITGNNLA 491
Query: 356 IEIAQEMIKEVLSQ 369
+ A ++ + ++Q
Sbjct: 492 TQTAHYLVTQRITQ 505
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
DST+ +IEVP VG ++GK G T+ Q SGA+IQI++ + P R V I G
Sbjct: 432 DSTL--EIEVPETLVGAILGKGGKTLVEFQQCSGARIQISKKGEYVPGTRNRKVIITG 487
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 190 DDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
D SS D++ M+ KI + N G +IGKAG TI ++ SGAK++++ +++ P A R
Sbjct: 26 DGISSGDETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRI 85
Query: 250 VEIIGTLSNIDKAEKLINAVIAEA----DAGGSPSLVARGLATAQASGAAEQVEIKVPNE 305
V I G + + A K+ VI+E ++G P V A V I +P
Sbjct: 86 VLISGKVETVLSAAKM---VISEMYRDPNSGRVPDDV----------NAVMTVSIVIPAA 132
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
GL+IG+GGE I L+ + A+IQL + G ERIV + G + Q + A E I
Sbjct: 133 ACGLVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVH 192
Query: 366 VL 367
++
Sbjct: 193 LI 194
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 200 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 256
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 257 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 316
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 317 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 374
Query: 358 IAQEMI 363
A I
Sbjct: 375 KAVSAI 380
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D K+ VPN+ G++IGK G T++ + SGA +Q+++ + + R V + G
Sbjct: 312 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEP 370
Query: 257 SNIDKAEKLINAVIAEADAGGSPSL------VARGLATAQASGA--------AEQVEIKV 302
+ KA I + E D S L VA +A + +G+ I V
Sbjct: 371 EQVHKAVSAIVQKVQE-DPQSSSCLNISYANVAGPVANSNPTGSPYASPXXXXXXXXIAV 429
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTGDMRQIEIAQ 360
P VG I+G+GG+T+ Q +GARIQ+ + LP G++ R V +TG + AQ
Sbjct: 430 PENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP---GTRNRRVTITGSPAATQAAQ 486
Query: 361 EMIKEVLS--QTVRPS 374
+I + ++ Q VR S
Sbjct: 487 YLISQRVTYEQGVRAS 502
>gi|336265011|ref|XP_003347280.1| hypothetical protein SMAC_08717 [Sordaria macrospora k-hell]
gi|380087770|emb|CCC05225.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 583
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I + ++ VG++IG+ G+ +R ++ S ++Q + P RP +I G + ++A+
Sbjct: 218 ITIESSLVGLIIGRQGENLRRVEGESRCRVQFV--PPSSPTEQYRPCKITGPRAQREEAK 275
Query: 264 KLINAVIAEADAGGS-------PSLVARGLATAQ--ASGAAEQVEIKVPNEKVGLIIGRG 314
++IN +I ++ GS P RG + A + ++I VP+ VGLIIGRG
Sbjct: 276 EMINRIIRDSGMRGSAPADRPAPRDTGRGGSAAPPPLKEGEDSLQIMVPDRTVGLIIGRG 335
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GETI+ LQ RSG I ++ ++ + R V + G ++A+E+I E++ R
Sbjct: 336 GETIRDLQERSGCHINIVGENKSV---NGLRPVNLIGTPAAAKMAKELILEIVDSDSRNG 392
Query: 375 TLSGG 379
GG
Sbjct: 393 NNPGG 397
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG I I + RPV +IGT +
Sbjct: 318 SLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GENKSVNGLRPVNLIGTPAAAK 375
Query: 261 KAEKLINAVI-AEADAGGSP--------SLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
A++LI ++ +++ G +P + G + I VP+E VG+II
Sbjct: 376 MAKELILEIVDSDSRNGNNPGGNRPPRNDNMGGGGGGGGGGYDKQNDSIFVPSEAVGMII 435
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GGETI+ +Q +G +I + G G ER + + G I A+ I++ +
Sbjct: 436 GKGGETIREMQNTTGCKINV---SQSSGAGETEREIGLVGTREAINRAKRAIEDKVDAAK 492
Query: 372 RPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGN 431
+ S SGG PP+ RG H YD P G PS N P
Sbjct: 493 QKS--SGG------------APPR---RGQH----RDYDNPNYG-QPSNNNSVPQ----- 525
Query: 432 YPPQQMAPRSNYGGPPNMQGAAGGYDYYGGQGGHVS 467
QQ P N P Y YGG +V+
Sbjct: 526 ---QQTMPAGNAAAPTGAGAQGDPYAMYGGYDNYVA 558
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMR 354
A+ I + + VGLIIGR GE ++ ++ S R+Q +P P + R ++TG
Sbjct: 213 ADTETITIESSLVGLIIGRQGENLRRVEGESRCRVQFVPPSSPT---EQYRPCKITGPRA 269
Query: 355 QIEIAQEMIKEVL 367
Q E A+EMI ++
Sbjct: 270 QREEAKEMINRII 282
>gi|336467937|gb|EGO56100.1| hypothetical protein NEUTE1DRAFT_83087 [Neurospora tetrasperma FGSC
2508]
gi|350289825|gb|EGZ71050.1| hypothetical protein NEUTE2DRAFT_151588 [Neurospora tetrasperma
FGSC 2509]
Length = 578
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ S ++Q + P RP +I G + ++A+
Sbjct: 219 IQIESSLVGLIIGRQGENLRRVEGESRCRVQFV--PPSSPTEQYRPCKITGPRAQREEAK 276
Query: 264 KLINAVIAEADAGGS-------PSLVARGLATAQ--ASGAAEQVEIKVPNEKVGLIIGRG 314
++IN +I ++ GS P RG + A + ++I VP+ VGLIIGRG
Sbjct: 277 EMINRIIRDSGMRGSAPADRPAPRDSGRGGSAAPPPLKEGEDSLQIMVPDRTVGLIIGRG 336
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPS 374
GETI+ LQ RSG I ++ ++ + R V + G + A+E+I E++ R +
Sbjct: 337 GETIRDLQERSGCHINIVGEN---KSVNGLRPVNLIGTPAAAKTAKELILEIVDSDSRNA 393
Query: 375 TLSGG 379
+ GG
Sbjct: 394 SNPGG 398
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG I I + RPV +IGT +
Sbjct: 319 SLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GENKSVNGLRPVNLIGTPAAAK 376
Query: 261 KAEKLINAVIAE-----ADAGGSPSLVARGLATAQASGAAEQVE-IKVPNEKVGLIIGRG 314
A++LI ++ ++ GG+ + G +Q + I VP+E VG+IIG+G
Sbjct: 377 TAKELILEIVDSDSRNASNPGGNRPPRGDNMGGGGGGGYDKQNDSIFVPSEAVGMIIGKG 436
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
GETI+ +Q +G +I + G G ER + + G I A+ I++
Sbjct: 437 GETIREMQNTTGCKINV---SQSSGAGETEREIGLVGTREAINRAKRAIED 484
>gi|390335393|ref|XP_003724136.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 696
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 19/169 (11%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+++ ++ VP+ VG++IG+ G I LQ SG IQI A + + R V + GT
Sbjct: 123 SINDELLVPDKVVGLIIGRQGQQISSLQSESGCNIQI---APENGISGDRQVTLTGTPEA 179
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ A+ LI ++ +A + +A G V++ +P KVGL+IG+GGETI
Sbjct: 180 VMHAKSLILDIVNKA-------------SQNEAEGNMT-VDMLIPATKVGLVIGKGGETI 225
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
K LQ ++G R+ +I Q P G ++ +R++GD ++IE A+ ++ EV+
Sbjct: 226 KQLQEQAGVRMVMI-QEGPVATG-MDKPLRISGDSQKIEEAKRLVSEVM 272
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M+ + +P KVG++IGK G+TI+ LQ +G ++ + ++ +P+ I G I
Sbjct: 203 MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQEGPV-ATGMDKPLRISGDSQKI 261
Query: 260 DKAEKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++A++L++ V+ A D + +RG ++ VP VG++IGRGG+
Sbjct: 262 EEAKRLVSEVMENAKNNDRSSGDNFYSRG---------GPHKDVIVPKHAVGMVIGRGGD 312
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLS 368
IK +Q ++ AR+Q P GD ER+ +TG + +A+ M+ ++++
Sbjct: 313 MIKRIQEQTKARVQFKP-----GDRDAPERVALITGSAESVSMAESMVNDLVA 360
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 60/109 (55%), Gaps = 7/109 (6%)
Query: 169 EEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMS----RKIEVPNNKVGVLIGKAGDTIRY 224
+ + +E + + +V++N+K++D SS D+ + + VP + VG++IG+ GD I+
Sbjct: 257 DSQKIEEAKRLVSEVMENAKNNDRSSGDNFYSRGGPHKDVIVPKHAVGMVIGRGGDMIKR 316
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+Q + A++Q D A R I G+ ++ AE ++N ++A A
Sbjct: 317 IQEQTKARVQFK---PGDRDAPERVALITGSAESVSMAESMVNDLVANA 362
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E+ VP++ VGLIIGR G+ I LQ+ SG IQ+ P++ GD R V +TG +
Sbjct: 127 ELLVPDKVVGLIIGRQGQQISSLQSESGCNIQIAPENGISGD----RQVTLTGTPEAVMH 182
Query: 359 AQEMIKEVLSQ 369
A+ +I +++++
Sbjct: 183 AKSLILDIVNK 193
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
+VP K GL+IGRGGE I+ + +S A +++ P G ++I ++GD QI+ A+
Sbjct: 431 RVPAGKCGLVIGRGGENIRAIMQQSRAHVEISHGQHPPG----QKIFLISGDPEQIDYAR 486
Query: 361 EMIKE 365
+I E
Sbjct: 487 SLIDE 491
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
+ +S + P+ ++ K+ +P+ G +IGK G TI LQ +GA I++++ D P
Sbjct: 51 IGHSYYNTPNLLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 110
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIK 301
R + GT ++ I + E + V L T A+Q ++
Sbjct: 111 GTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 170
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+ A
Sbjct: 171 VPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVS 228
Query: 362 MI 363
I
Sbjct: 229 AI 230
>gi|312067348|ref|XP_003136700.1| KH domain-containing protein [Loa loa]
Length = 571
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 21/162 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA
Sbjct: 213 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTTQ--ERCAVIQGTAEQIAKA 270
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I+ ++ ++ A +G AE + VP+ K GL+IG+GGETIK +
Sbjct: 271 TQFISELVKKSGA----------------AGGAEMFYMHVPSNKTGLVIGKGGETIKQIC 314
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA ++L P + E++ + G QI AQ +I+
Sbjct: 315 AESGAHVELSRDPPPN---ASEKVFIIKGTPYQIHHAQHIIR 353
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 89/180 (49%), Gaps = 23/180 (12%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGV--LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
P + + +EVP++ VG+ +IG+ G+ I +Q + ++Q++ ++D + R
Sbjct: 25 PVGSVGEVVMETMEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQMSPESDGN---NMRQ 81
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKV 307
+ G+ ++D+A +IN VIA A P+ G Q+ E+ +P K
Sbjct: 82 CTLQGSKMSVDRARAMINEVIARAGNRPPPNRTGH-FDGGIPVGTGRQITQEMFIPGAKC 140
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GL ++G ++ +I ++ + G + + +R+TGD ++E A+ M++E+L
Sbjct: 141 GL-------------EQTGVKMVMIQEN--QESGGQPKPLRITGDPEKVENARRMVEEIL 185
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 300 IKVPNEKVGL--IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++VP+ VGL +IGRGGE I +Q+++ R+Q+ PE DG+ R + G ++
Sbjct: 37 MEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQM----SPESDGNNMRQCTLQGSKMSVD 92
Query: 358 IAQEMIKEVLSQ 369
A+ MI EV+++
Sbjct: 93 RARAMINEVIAR 104
>gi|225682613|gb|EEH20897.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226290030|gb|EEH45514.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 308
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 13/186 (6%)
Query: 188 KSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
KS + S+ D + +I VP+ VG++IG+ G+TIR LQ SG + I ++ +
Sbjct: 26 KSREVSARVDDEDAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNESKS--INGL 83
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR------GLATAQASGAAEQVEIK 301
RPV +IG+ ++A+ I ++ E+D + R G +T G I
Sbjct: 84 RPVNLIGSPEATERAKNFILEIV-ESDTRQLANPQQREQRPPYGDSTGGPGGEKVNDTIY 142
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
+P + VG+IIG+GG+TIK +Q +G RI + P G + ER V + G IE A+
Sbjct: 143 IPPDAVGMIIGKGGDTIKEMQAITGCRINI---QSPVGRDA-EREVTLVGSRGAIEEAKR 198
Query: 362 MIKEVL 367
MI E +
Sbjct: 199 MIMEKI 204
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
V I VP+ VGLIIGRGGETI+ LQ RSG + ++ + + R V + G E
Sbjct: 40 VRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNES---KSINGLRPVNLIGSPEATE 96
Query: 358 IAQEMIKEVLSQTVR 372
A+ I E++ R
Sbjct: 97 RAKNFILEIVESDTR 111
>gi|242001078|ref|XP_002435182.1| KH domain RNA binding protein, putative [Ixodes scapularis]
gi|215498512|gb|EEC08006.1| KH domain RNA binding protein, putative [Ixodes scapularis]
Length = 609
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IG+ G+ I LQ SG KIQ+ D P RP + G I+KA+ +IN +I+
Sbjct: 105 VIGRGGEQISRLQAESGCKIQMAPDCGGQPD---RPCTLTGPRHAIEKAKDMINQIISR- 160
Query: 274 DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
GG PS + G VE+ VP +VGL+IG+GGETI+GLQ R+ ++ +I
Sbjct: 161 --GGDPSQLNDGHVI---------VELMVPGPRVGLVIGKGGETIRGLQERANVKMVMI- 208
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
Q P+ ++ +R+TG+ + E+ + E
Sbjct: 209 QDGPQ-QSMMDKPLRITGEKSKCEVRGPLFCE 239
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 172 SVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGA 231
++E + + Q++ S+ DPS +D + ++ VP +VG++IGK G+TIR LQ +
Sbjct: 146 AIEKAKDMINQII--SRGGDPSQLNDGHVIVELMVPGPRVGLVIGKGGETIRGLQERANV 203
Query: 232 KIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQA 291
K+ + +D +P+ I G S + L E G G
Sbjct: 204 KMVMIQDGPQQ-SMMDKPLRITGEKSKCEVRGPL----FCEYGGPGGGGPGGPGGPGGGG 258
Query: 292 SGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
G A Q E+ VP + VG++IG+ G+ IK +Q +GAR+Q P+ D + +R+ +TG
Sbjct: 259 PGGASQ-EVLVPKQAVGVVIGKQGDMIKRIQQETGARVQF---QQPQDDNAPDRVCLLTG 314
Query: 352 DMRQIEIAQEMIKEVLSQTV 371
Q+ A I E++ +
Sbjct: 315 GPEQVHHAASFIGELIQSVL 334
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+++ VP VGV+IGK GD I+ +Q +GA++Q + D + A R + G +
Sbjct: 263 SQEVLVPKQAVGVVIGKQGDMIKRIQQETGARVQFQQPQDDN--APDRVCLLTGGPEQVH 320
Query: 261 KAEKLINAVIAEA-------------DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
A I +I G +V+ VP K
Sbjct: 321 HAASFIGELIQSVLVRGRGRGGFDGGFGGPPGGPGMGRGGRRGGGDDMHEVQYTVPANKC 380
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
GL+IG+GGE I+ + +SGA ++L P E++ + G+ +QIE AQ++I E
Sbjct: 381 GLVIGKGGEAIRQINQQSGAHVELSRAPPPN---PVEKVFIIRGNPQQIEHAQQLINE 435
>gi|198477401|ref|XP_002136631.1| GA27688 [Drosophila pseudoobscura pseudoobscura]
gi|198142923|gb|EDY71635.1| GA27688 [Drosophila pseudoobscura pseudoobscura]
Length = 836
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGK-AGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+T +I +P + +G+ + DTI ++Q SGAK+Q+ + + R + + G
Sbjct: 136 TTCEEQIRIPESIANAFMGRGSNDTITHIQAESGAKVQLMPEQE-------RVITLRGQR 188
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K +I + + G L+ + SG + EI +P KVGL+IG+GG+
Sbjct: 189 DTVSKGRDMIQQMASRGGGGTVEVLLTINMPPPGPSGYSPYQEIMIPGAKVGLVIGKGGD 248
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++GD ++IE A++M+ ++++Q
Sbjct: 249 TIKQLQEKTGAKMIIIQ------DGPNQEVIKPLRISGDPQKIEHAKQMVLDLIAQ 298
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 230 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPN--QEVIKPLRISGDPQKIEH 287
Query: 262 AEKLINAVIAEADA-----------------GGSPSLVARGLATAQASGAAEQVEIKVPN 304
A++++ +IA+ DA GG G E VE+ VP
Sbjct: 288 AKQMVLDLIAQKDALAQQQGGRGGGSGGGGGGGGGGGPGLGYNNFNNGNGGESVEVFVPK 347
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
VG++IG+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I
Sbjct: 348 IAVGVVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTID 404
Query: 365 EVLSQTVR 372
++ ++
Sbjct: 405 GLIENVMQ 412
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + + R I GT ++
Sbjct: 340 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDE--MGDRRCVIQGTRQQVE 397
Query: 261 KAEKLINAVIAEADAGGSPSLVAR----------------GLATAQASGAAEQVEIKVPN 304
A++ I+ +I + G A G E++ VP
Sbjct: 398 DAKRTIDGLIENVMQRNGLNRNGNGGGSQSGGEGNSNYGYGYGVNHAQGGREEITFMVPA 457
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQE 361
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A++
Sbjct: 458 SKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAARQ 511
Query: 362 MIKEVLSQTV 371
MI E ++ +
Sbjct: 512 MISEKINMEL 521
>gi|195155225|ref|XP_002018506.1| GL16727 [Drosophila persimilis]
gi|194114302|gb|EDW36345.1| GL16727 [Drosophila persimilis]
Length = 834
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGK-AGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+T +I +P + +G+ + DTI ++Q SGAK+Q+ + + R + + G
Sbjct: 136 TTCEEQIRIPESIANAFMGRGSNDTITHIQAESGAKVQLMPEQE-------RVITLRGQR 188
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K +I + + G L+ + SG + EI +P KVGL+IG+GG+
Sbjct: 189 DTVSKGRDMIQQMASRGGGGTVEVLLTINMPPPGPSGYSPYQEIMIPGAKVGLVIGKGGD 248
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++GD ++IE A++M+ ++++Q
Sbjct: 249 TIKQLQEKTGAKMIIIQ------DGPNQEVIKPLRISGDPQKIEHAKQMVLDLIAQ 298
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 230 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPN--QEVIKPLRISGDPQKIEH 287
Query: 262 AEKLINAVIAEADA-----------------GGSPSLVARGLATAQASGAAEQVEIKVPN 304
A++++ +IA+ DA GG G E VE+ VP
Sbjct: 288 AKQMVLDLIAQKDALAQQQGGRGGGSGGGGGGGGGGGPGLGYNNFNNGNGGESVEVFVPK 347
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
VG++IG+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I
Sbjct: 348 IAVGVVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTID 404
Query: 365 EVLSQTVR 372
++ ++
Sbjct: 405 GLIENVMQ 412
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + + R I GT ++
Sbjct: 340 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDE--MGDRRCVIQGTRQQVE 397
Query: 261 KAEKLINAVIAEADAGGSPSLVAR----------------GLATAQASGAAEQVEIKVPN 304
A++ I+ +I + G A G E++ VP
Sbjct: 398 DAKRTIDGLIENVMQRNGLNRNGNGGGSQSGGEGNSNYGYGYGVNHAQGGREEITFMVPA 457
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQE 361
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A++
Sbjct: 458 SKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAARQ 511
Query: 362 MIKEVLSQTV 371
MI E ++ +
Sbjct: 512 MISEKINMEL 521
>gi|324502127|gb|ADY40937.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 341
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + IEVP++ VG++IG+ G+ I +Q S ++Q++ ++D + R
Sbjct: 26 PSGGAGDVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGNN---MRQCT 82
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ GT +++A+ +I VIA A P+ RG SG Q+ E+ +P K GL
Sbjct: 83 LQGTKMAVERAKSMIQDVIARAGNRPPPN---RGHFDGGMSGGGRQITHEMLIPGAKCGL 139
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I + + G + + +R+ G+ +++ A+ M++++L
Sbjct: 140 VIGKGGETIKNIQEQAGVKMVMIQE--TQESGGQPKPLRIIGEPDKVDTARRMVEDIL 195
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP VG++IGK G+TI+ L SGAKIQ D D R I GT I KA +
Sbjct: 232 VPRASVGMIIGKGGETIKRLAAESGAKIQF--KPDEDQTTPDRCAVIQGTTEQIAKATQF 289
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
I+ ++ ++ AG SGA E + VP K GL+IG+GGETIK + S
Sbjct: 290 ISELVNKSGAG---------------SGA-EIFYMHVPANKTGLVIGKGGETIKQICAES 333
Query: 326 GARIQL 331
GA ++L
Sbjct: 334 GAHVEL 339
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 21/182 (11%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK---IQITRDADADPHAATRPVEIIGTL 256
++ ++ +P K G++IGK G+TI+ +Q +G K IQ T+++ P +P+ IIG
Sbjct: 126 ITHEMLIPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP----KPLRIIGEP 181
Query: 257 SNIDKAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVG 308
+D A +++ ++ + GG E + VP VG
Sbjct: 182 DKVDTARRMVEDILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEGI---VPRASVG 238
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+IIG+GGETIK L SGA+IQ P E + +R + G QI A + I E+++
Sbjct: 239 MIIGKGGETIKRLAAESGAKIQFKPD---EDQTTPDRCAVIQGTTEQIAKATQFISELVN 295
Query: 369 QT 370
++
Sbjct: 296 KS 297
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGL+IGRGGE I +Q++S R+Q+ PE DG+ R + G +E A
Sbjct: 38 IEVPDHCVGLVIGRGGEQISQIQSQSNCRVQM----SPESDGNNMRQCTLQGTKMAVERA 93
Query: 360 QEMIKEVLSQ 369
+ MI++V+++
Sbjct: 94 KSMIQDVIAR 103
>gi|324526039|gb|ADY48622.1| Far upstream element-binding protein 2, partial [Ascaris suum]
Length = 255
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 10/178 (5%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS + IEVP++ VG++IG+ G+ I +Q S ++Q++ ++D + R
Sbjct: 26 PSGGAGDVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGNN---MRQCT 82
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGL 309
+ GT +++A+ +I VIA A P+ RG SG Q+ E+ +P K GL
Sbjct: 83 LQGTKMAVERAKSMIQDVIARAGNRPPPN---RGHFDGGMSGGGRQITHEMLIPGAKCGL 139
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+IG+GGETIK +Q ++G ++ +I + + G + + +R+ G+ +++ A+ M++++L
Sbjct: 140 VIGKGGETIKNIQEQAGVKMVMIQE--TQESGGQPKPLRIIGEPDKVDTARRMVEDIL 195
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I+VP+ VGL+IGRGGE I +Q++S R+Q+ PE DG+ R + G +E A
Sbjct: 38 IEVPDHCVGLVIGRGGEQISQIQSQSNCRVQM----SPESDGNNMRQCTLQGTKMAVERA 93
Query: 360 QEMIKEVLSQ 369
+ MI++V+++
Sbjct: 94 KSMIQDVIAR 103
>gi|295669238|ref|XP_002795167.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285101|gb|EEH40667.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 280
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 13/171 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG + I ++ + RPV +IG+ ++A
Sbjct: 13 RIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNESKS--VNGLRPVNLIGSPEATERA 70
Query: 263 EKLINAVIAEADAGGSPSLVAR------GLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ I ++ E+D + R G +T G I +P + VG+IIG+GG+
Sbjct: 71 KNFILEIV-ESDTRQLANPQQREQRPPYGDSTGGPGGEKVNDTIYIPPDAVGMIIGKGGD 129
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
TIK +Q +G RI + P G + ER V + G IE A+ MI E +
Sbjct: 130 TIKEMQAITGCRINI---QSPVGRDA-EREVTLVGSRGAIEEAKRMIMEKI 176
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
V I VP+ VGLIIGRGGETI+ LQ RSG + ++ + + R V + G E
Sbjct: 12 VRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNES---KSVNGLRPVNLIGSPEATE 68
Query: 358 IAQEMIKEVLSQTVR 372
A+ I E++ R
Sbjct: 69 RAKNFILEIVESDTR 83
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++ A
Sbjct: 121 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAA 180
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 181 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 240
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 241 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 281
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 463 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 518
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 519 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 554
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 478 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 537
Query: 263 EKLIN 267
+ LI+
Sbjct: 538 QYLIS 542
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVTGDMR 354
+++ +P+ G IIG+GG+TI LQ +GA I+L D G+ ER+ V G
Sbjct: 120 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK----DFYPGTTERVCLVQGTAE 175
Query: 355 QIEIAQEMIKE 365
+ A I E
Sbjct: 176 ALNAAHSFIAE 186
>gi|341903406|gb|EGT59341.1| hypothetical protein CAEBREN_22676 [Caenorhabditis brenneri]
Length = 925
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP VG ++G G I+ L SG KIQ D+D P+ TR + IIGT + + A
Sbjct: 313 VHVPRTSVGAIMGHKGCNIKKLSDESGTKIQFLNDSD--PNMMTRSLAIIGTSTRVQIAS 370
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+LI A++ + G + GL + + +P K GL++GRGGETIK +
Sbjct: 371 QLIKAIV---EGTGENAETVNGLPLSL-------FYLSIPAHKCGLVVGRGGETIKQINI 420
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+GA +L + D + E+ + G QIE A+ +I
Sbjct: 421 DTGAYCELSRE---TADDTTEKTFVIRGTEDQIEHAKHVI 457
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 15/163 (9%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P N VG++IG+ G I + SG ++Q+ + ++P + VEI G I A +L
Sbjct: 140 IPENCVGLVIGRNGTEINSISQKSGCRVQVNVNETSNP--GFKMVEIFGPPEKIQHAIEL 197
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+N V++ + V R + + ++I +P K G IIG+GGET+K L+ S
Sbjct: 198 VNEVVSRS--------VNRQANLSTLTPKKITIDIPIPANKCGSIIGKGGETMKKLRNLS 249
Query: 326 GARIQLIPQ-HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
I LI + +L + D + +R+TGD + +E A+ ++ E L
Sbjct: 250 KCYITLIQENNLADSD----KPLRITGDPKCVEQARRLVAEFL 288
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 168 KEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQY 227
K + ++E N V + V+ + + S+ ++ I +P NK G +IGK G+T++ L+
Sbjct: 190 KIQHAIELVNEVVSRSVN--RQANLSTLTPKKITIDIPIPANKCGSIIGKGGETMKKLRN 247
Query: 228 NSGAKIQITRD---ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA-DAGGSPSLVA 283
S I + ++ AD+D +P+ I G +++A +L+ + DA + VA
Sbjct: 248 LSKCYITLIQENNLADSD-----KPLRITGDPKCVEQARRLVAEFLVNVEDAPPTDGFVA 302
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G SG + + VP VG I+G G IK L SG +IQ + P
Sbjct: 303 NG------SGGQTTLHVHVPRTSVGAIMGHKGCNIKKLSDESGTKIQFLNDSDP---NMM 353
Query: 344 ERIVRVTGDMRQIEIAQEMIKEVLSQT 370
R + + G +++IA ++IK ++ T
Sbjct: 354 TRSLAIIGTSTRVQIASQLIKAIVEGT 380
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++ A
Sbjct: 120 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAA 179
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 180 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 239
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 240 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 280
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 479 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 534
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 535 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 570
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 494 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 553
Query: 263 EKLIN 267
+ LI+
Sbjct: 554 QYLIS 558
>gi|198433420|ref|XP_002121389.1| PREDICTED: similar to neuro-oncological ventral antigen 1 [Ciona
intestinalis]
Length = 543
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+ K+ +P G +IGK G I LQ +SGA I++++ D P R V I GT +
Sbjct: 47 LILKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDRVVLIQGTAEGL 106
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
K + I + E V + LA A +QV+I VPN GL+IG+ G TIK
Sbjct: 107 MKVQNTIIEKVYEFP-------VPKDLA-AIIGDRPKQVKIIVPNTTAGLVIGKAGATIK 158
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+ SG+++QL P+G +ER++ + G+ Q+ A +I +
Sbjct: 159 TIMEESGSKVQL--SQKPDGVNVQERVITIKGEKHQLMTASNIIID 202
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S+D + ++ +P N +G ++GKAG T+ Q SGAKIQI++ D R V I
Sbjct: 453 SSDGQKETIELAIPENLIGAVLGKAGRTLVEYQDVSGAKIQISKKGDYVAGTRNRRVTIT 512
Query: 254 GTLSNIDKAEKLINAVIAEA 273
G A+ LI +A A
Sbjct: 513 GKPPCPQTAQFLITQRVASA 532
>gi|119589501|gb|EAW69095.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_a [Homo sapiens]
Length = 345
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
++M+ + VP+ VG++IG+ G+ I +Q +SG K+QI+ D+ P R V + G
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPE 199
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ KA+ +++ +++ GG P A +G + EI +P K GL+IG+GGET
Sbjct: 200 SVQKAKMMLDDIVSRG-RGGPPGQFHDN-ANGGQNGTVQ--EIMIPAGKAGLVIGKGGET 255
Query: 318 IKGLQTRSGARIQLI 332
IK LQ R+G ++ LI
Sbjct: 256 IKQLQERAGVKMILI 270
>gi|342873275|gb|EGU75481.1| hypothetical protein FOXB_13993 [Fusarium oxysporum Fo5176]
Length = 563
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S IE+ ++ VG++IG+ G+ +R ++ S ++Q D PH R +I G
Sbjct: 198 SETIEIDSSLVGLIIGRQGENLRRIESESNCRVQFLAATDGGPH---RLCKISGPRHRRA 254
Query: 261 KAEKLINAVIAEADAGG-----SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+ + IN +I ++ G P +G A A G + ++I VP+ VGLIIGRGG
Sbjct: 255 EVKDAINRIIDDSGMGALNRPEKPRDPNKGGAAALREGE-DHMQIMVPDRTVGLIIGRGG 313
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
ETI+ LQ RSG I ++ + + R V + G A++ I E++ R
Sbjct: 314 ETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGTREAAARAKDFIMEIVDSDSR 367
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT +A
Sbjct: 297 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGTREAAARA 354
Query: 263 EKLINAVIAEADAGGSPSLVARGLAT--------------AQASGAAEQVE--IKVPNEK 306
+ I ++ G +P V R A SG +++ + VP++
Sbjct: 355 KDFIMEIVDSDSRGDAPPPVKRLGGGGAAPGGRHDGPQRDAGGSGGPDKINDAVYVPSDA 414
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VG+IIG+GGETI+ +Q +G +I + P G +R + + G I A+ I E
Sbjct: 415 VGMIIGKGGETIREMQNTTGCKINVAQSSGP---GETQREIALIGSRDSIARAKLAIDE 470
>gi|308501016|ref|XP_003112693.1| hypothetical protein CRE_30686 [Caenorhabditis remanei]
gi|308267261|gb|EFP11214.1| hypothetical protein CRE_30686 [Caenorhabditis remanei]
Length = 597
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 172 SVEPSNVVPQQVVDNSKSDDPS-STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSG 230
+VE + V+ +VV S++ P + + I +P N+ G++IGKAG+TIR LQ SG
Sbjct: 106 NVEAAKVLINEVVARSQTPRPQYGFPRAQNTIDIPIPPNRCGLIIGKAGETIRQLQEKSG 165
Query: 231 AKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPS-LVARGLATA 289
K+ + ++ + A +P+ I G I+ A++L+ ++ G S L
Sbjct: 166 CKMILVQENQSISDQA-KPLRITGDPQKIEIAKQLVADILNSGGDGNGGSGLQMHHQGGG 224
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
GA+ + E+ VP VG+IIG+ G+TIK L +G +IQ P P ++ER V
Sbjct: 225 GGGGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPT---TEERTAIV 281
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPST 375
G QI A E I E+ VR ST
Sbjct: 282 MGTREQIYRATERITEL----VRKST 303
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP + VG++IGK GDTI+ L +G KIQ D DP R ++GT I +A
Sbjct: 234 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPTTEERTAIVMGTREQIYRA 291
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ I ++ ++ + G+A A + VP K GL+IG+GGETIK +
Sbjct: 292 TERITELVRKSTQQQGGGNMGGGVAND-----ASTFFMSVPAAKCGLVIGKGGETIKQIN 346
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
SGA +L D E++ + G RQIE A+ +I+
Sbjct: 347 AESGAHCELSRDANASPD---EKVFVIKGGRRQIEHAKHLIR 385
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
+ D ST + VP K G++IGK G+TI+ + SGA +++RDA+A P + I
Sbjct: 316 ANDASTFF--MSVPAAKCGLVIGKGGETIKQINAESGAHCELSRDANASPD--EKVFVIK 371
Query: 254 GTLSNIDKAEKLINAVIAE 272
G I+ A+ LI + +
Sbjct: 372 GGRRQIEHAKHLIRIKVGD 390
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P + +S+ ++ +D + K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PTEATSTKRSN--TAGEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSK 73
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAEQ 297
D P R + G+ ++ I + E GG+ + + L T + A+Q
Sbjct: 74 DFYPGTTERVCLVQGSAESLLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAKQ 133
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T++ + SGA +QL P G ER+V V+G+ Q+
Sbjct: 134 AKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQL--SQKPAGPNLHERVVTVSGEPSQV- 190
Query: 358 IAQEMIKEVL 367
Q+ I+ ++
Sbjct: 191 --QKAIRSII 198
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERI 346
A++ E +E+ VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R
Sbjct: 321 AESVTGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRSRK 377
Query: 347 VRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
V +TG + AQ +I + ++ Q VR S
Sbjct: 378 VTITGPPGATQAAQYLIGQRVAYEQGVRSS 407
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
+ ++ VP VG ++GK G T+ Q +GA+IQI++ + P +R V I G
Sbjct: 329 TLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITG 382
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 46 EDGQFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 256 LSNIDKAEKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
+ ++ I I E A P + + T +QV+I VPN GLIIG
Sbjct: 106 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD-RIKQVKIIVPNSTAGLIIG 164
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 165 KGGATVKAVMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 213
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 393 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 452
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 453 GTPAATQAAQYLI 465
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 396 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 452
Query: 351 GDMRQIEIAQEMIKE 365
G + AQ +I +
Sbjct: 453 GTPAATQAAQYLITQ 467
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D + K+ +PN G +IGK GD I LQ +S +I+++ + D P R +
Sbjct: 15 DNSSGDKVVL--KLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVI 72
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
I G+++ + + + I ++E G + + G+ + Q+++ VPN G+I
Sbjct: 73 VITGSIAGVRQVNRFILEKVSE--EGKADKAIQYGVLDKNRN---RQLKMIVPNAAAGVI 127
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
IG+GG IK +Q +SGA +Q+ + ERI+ VTG+ + A E+I
Sbjct: 128 IGKGGSNIKEIQDKSGAHVQVSQKKAQY--AIDERILTVTGEFNERLTAWELI 178
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 291 ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQH--LPEGDGSKERIVR 348
+SG +++ +PN G IIG+GG+ I LQ S RI+L + P G+KER++
Sbjct: 17 SSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFP---GTKERVIV 73
Query: 349 VTGDMRQIEIAQEMIKEVLSQ 369
+TG + + I E +S+
Sbjct: 74 ITGSIAGVRQVNRFILEKVSE 94
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
++++ PSS ++ + KI VP++ +G ++GK G I +Q SGA IQ+++ D P
Sbjct: 262 ARNNRPSSYGETVI--KIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIPGTK 319
Query: 247 TRPVEIIGTLSNIDKAEKLI 266
R V + GT A+KLI
Sbjct: 320 DREVTVTGTNDAAHYADKLI 339
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQ--HLPEGDGSKERIVRVTGDMRQ 355
++I VP+ +G I+G+ G+ I +Q SGA IQ+ + ++P G+K+R V VTG
Sbjct: 275 IKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIP---GTKDREVTVTGTNDA 331
Query: 356 IEIAQEMIKEVLSQ 369
A ++IK L +
Sbjct: 332 AHYADKLIKGYLDK 345
>gi|408388015|gb|EKJ67710.1| hypothetical protein FPSE_12081 [Fusarium pseudograminearum CS3096]
Length = 566
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 22/180 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT +A
Sbjct: 300 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGTREAAARA 357
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQA---------------SGAAEQVE--IKVPNE 305
+ I ++ G +P V R A SG +++ + VP++
Sbjct: 358 KDFIMEIVDSDSRGDAPPPVKRLGGGGSAPPARHDGPQQRDMGGSGGPDKINDAVYVPSD 417
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VG+IIG+GGETI+ +Q +G +I + P G +R + + G I A++ I E
Sbjct: 418 AVGMIIGKGGETIREMQNTTGCKINVAQSSGP---GETQREIALIGSRDSIARAKQAIDE 474
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ +S ++Q D P R +I G
Sbjct: 199 SETIQIESSLVGLIIGRQGENLRRIEADSNCRVQFLAPTDGGP-GPYRQCKISGPRHRRG 257
Query: 261 KAEKLINAVIAEADAGG-----SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+ ++ IN +I ++ G P +G ATA G + ++I VP+ VGLIIGRGG
Sbjct: 258 EVKEAINRIIEDSGMGALNRPEKPRDPNKGGATALREGE-DHMQIMVPDRTVGLIIGRGG 316
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
ETI+ LQ RSG I ++ + + R V + G A++ I E++ R
Sbjct: 317 ETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGTREAAARAKDFIMEIVDSDSR 370
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 87/170 (51%), Gaps = 10/170 (5%)
Query: 186 NSKSDD--PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
N+K + P DD+ K+ +P+ G +IGK G TI LQ ++G +++++ D P
Sbjct: 58 NTKRTNLGPGPVDDNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYP 117
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSL-VARGLATAQASGAAEQVEIKV 302
R + G + +++ + I E SP L V G T + A QV+I V
Sbjct: 118 GTQERVALLTGPVESLNNVAVFVLEKIKE-----SPQLGVKAGAETITSPERARQVKIVV 172
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
PN GLIIG+GG IK + +SG+R+Q+ +G ER++ ++G+
Sbjct: 173 PNSTAGLIIGKGGAMIKSIMEQSGSRVQI--SQKSDGITLSERVITISGE 220
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 205 EVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEK 264
EVP VG ++GK G T+ Q +GAKIQI++ + P R V I G ++ A
Sbjct: 475 EVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTITGPVTAAQNAHF 534
Query: 265 LINAVIAE 272
LI +A+
Sbjct: 535 LIMQRLAQ 542
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 273 ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
A G PSL G+ A +E +VP VG I+G+GG+T+ Q +GA+IQ+
Sbjct: 448 ATVAGFPSL-GGGITMAADPQKESILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQIS 506
Query: 333 P--QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+++P G++ R V +TG + + A +I + L+Q
Sbjct: 507 KKNEYVP---GTRNRRVTITGPVTAAQNAHFLIMQRLAQ 542
>gi|46117014|ref|XP_384525.1| hypothetical protein FG04349.1 [Gibberella zeae PH-1]
Length = 564
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 22/180 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT +A
Sbjct: 300 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGTREAAARA 357
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQA---------------SGAAEQVE--IKVPNE 305
+ I ++ G +P V R A SG +++ + VP++
Sbjct: 358 KDFIMEIVDSDSRGDAPPPVKRLGGGGSAPPARHDGPQQRDMGGSGGPDKINDAVYVPSD 417
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VG+IIG+GGETI+ +Q +G +I + P G +R + + G I A++ I E
Sbjct: 418 AVGMIIGKGGETIREMQNTTGCKINVAQSSGP---GETQREIALIGSRDSIARAKQAIDE 474
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ +S ++Q D P R +I G
Sbjct: 199 SETIQIESSLVGLIIGRQGENLRRIEADSNCRVQFLAPTDGGP-GPYRQCKISGPRHRRG 257
Query: 261 KAEKLINAVIAEADAGG-----SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+ ++ IN +I ++ G P +G ATA G + ++I VP+ VGLIIGRGG
Sbjct: 258 EVKEAINRIIEDSGMGALNRPEKPRDPNKGGATALREGE-DHMQIMVPDRTVGLIIGRGG 316
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
ETI+ LQ RSG I ++ + + R V + G A++ I E++ R
Sbjct: 317 ETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGTREAAARAKDFIMEIVDSDSR 370
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
DD+ K+ +P+ G +IGK G TI LQ ++G +++++ D P R + G
Sbjct: 73 DDNKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGP 132
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSL-VARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+ +++ I I E SP L V G T + A QV+I VPN GLIIG+G
Sbjct: 133 VESLNNVAVFILDKIKE-----SPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKG 187
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
G IK + +SG+R+Q+ +G ER++ ++G+
Sbjct: 188 GAMIKSIMEQSGSRVQI--SQKSDGITLSERVITISGE 223
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 205 EVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEK 264
EVP VG ++GK G T+ Q +GAKIQI++ + P R V I G ++ A
Sbjct: 479 EVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTITGPVTAAQNAHF 538
Query: 265 LINAVIAE 272
LI +A+
Sbjct: 539 LIMQRLAQ 546
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTGDMRQ 355
+E +VP VG I+G+GG+T+ Q +GA+IQ+ +++P G++ R V +TG +
Sbjct: 476 LESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVP---GTRNRRVTITGPVTA 532
Query: 356 IEIAQEMIKEVLSQ 369
+ A +I + L+Q
Sbjct: 533 AQNAHFLIMQRLAQ 546
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D+T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G++
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I I I E P L + + + QA +QV+I VPN G+IIG+G
Sbjct: 123 EGIMTVVDFIMDKIRE-----KPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKG 177
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 178 GAFIKQIKEESGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 229
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++ +EVP +G ++G G ++ +Q+ SGA +QI++ P R V I G S I
Sbjct: 487 TKNVEVPEVIIGAVLGPNGRSLVEIQHASGANVQISKKGIFAPGTRNRIVTITGQPSAIA 546
Query: 261 KAEKLINAVIAE 272
KA+ LI I E
Sbjct: 547 KAQYLIEQKINE 558
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D+T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G++
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I I I E P L + + + QA +QV+I VPN G+IIG+G
Sbjct: 123 EGIMTVVDFIMDKIRE-----KPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKG 177
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 178 GAFIKQIKEESGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 229
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++ +EVP +G ++G G ++ +Q+ SGA +QI++ P R V I G + I
Sbjct: 488 TKNVEVPEVIIGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPNAIA 547
Query: 261 KAEKLINAVIAE 272
KA+ LI I E
Sbjct: 548 KAQFLIEQKINE 559
>gi|367036220|ref|XP_003667392.1| hypothetical protein MYCTH_2313192 [Myceliophthora thermophila ATCC
42464]
gi|347014665|gb|AEO62147.1| hypothetical protein MYCTH_2313192 [Myceliophthora thermophila ATCC
42464]
Length = 563
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG+
Sbjct: 299 DGEDSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--SENKSVNGLRPVNLIGSP 356
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ--ASGAAEQVE--IKVPNEKVGLIIG 312
+ A++LI ++ G+ RG + G ++V I VP++ VG+IIG
Sbjct: 357 AAARHAKELILEIVDSDSRNGNNPAGGRGGRNDHFGSGGGHDKVNDSIYVPSDAVGMIIG 416
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGETI+ +Q +G +I + G G ER + + G I A+ I++
Sbjct: 417 KGGETIREMQNVTGCKINV---SQSSGPGEVEREIGLVGTREAIAQAKRAIED 466
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
IE+ + VG++IG+ G+ +R ++ S ++Q + R I G ++A+
Sbjct: 205 IEIEASLVGLIIGRQGENLRRVESESRCRVQFIPPTGQNDQ--FRLCRITGPRPQREEAK 262
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAA-------EQVEIKVPNEKVGLIIGRGGE 316
++IN +I ++ G S G + ++I VP+ VGLIIGRGGE
Sbjct: 263 EMINNIIRDSGMRGGHSQGGGDRGRDGRGGPPPVPKDGEDSLQIMVPDRTVGLIIGRGGE 322
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR---- 372
TI+ LQ RSG I ++ ++ + R V + G A+E+I E++ R
Sbjct: 323 TIRDLQERSGCHINIVSENKSV---NGLRPVNLIGSPAAARHAKELILEIVDSDSRNGNN 379
Query: 373 PSTLSGGFN 381
P+ GG N
Sbjct: 380 PAGGRGGRN 388
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 293 GAAEQVE-IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
G + VE I++ VGLIIGR GE ++ +++ S R+Q IP P G + R+ R+TG
Sbjct: 197 GKDDNVETIEIEASLVGLIIGRQGENLRRVESESRCRVQFIP---PTGQNDQFRLCRITG 253
Query: 352 DMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
Q E A+EMI + +R S + GG +Q
Sbjct: 254 PRPQREEAKEMI----NNIIRDSGMRGGHSQ 280
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 141 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 200
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 201 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 260
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 261 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 301
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 500 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 555
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 556 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 591
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 515 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 574
Query: 263 EKLIN 267
+ LI+
Sbjct: 575 QYLIS 579
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI 252
SS ++ K+ +P+ G +IGK G TI LQ +GA I++++ D P R +
Sbjct: 7 SSAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLV 66
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLI 310
GT ++ I + E + V L T A+Q ++ VPN GLI
Sbjct: 67 QGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 126
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
IG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 127 IGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 177
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 184 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 243
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 244 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 303
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 304 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 344
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 543 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 598
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 599 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 634
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 558 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 617
Query: 263 EKLIN 267
+ LI+
Sbjct: 618 QYLIS 622
>gi|256078991|ref|XP_002575775.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043996|emb|CCD81542.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 372
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S + ++ VP K G++IGK G+TI+ LQ +G K+ + + ++ +P +P+ I G +
Sbjct: 25 SITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSN-NPTPEDKPLRISGEPA 83
Query: 258 NIDKAEKLINAVIAEADA-GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++KA + + +I D GGS G T+Q + VP EK GL+IG+GGE
Sbjct: 84 RVEKARQAVLVLINSRDRPGGSMHYGYDGQETSQYA---------VPAEKAGLVIGKGGE 134
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ-TVRPST 375
+IK + SGA +++ + P+ +I V G+ ++IE A MI E RP+T
Sbjct: 135 SIKEICRVSGAHVEISKEPPPD---PSIKIFNVRGNRQEIEQAIRMISERAGIPMTRPAT 191
Query: 376 LSGGF 380
+G
Sbjct: 192 TTGAV 196
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 265 LINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
+I +I A G+P+ A ++G+ +E+ VP K GL+IG+ GETIK LQ
Sbjct: 1 MIGDIIERAGKNGTPTTPAY-----NSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQEE 55
Query: 325 SGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
+G ++ LI Q PE ++ +R++G+ ++E A++ + +++ RP
Sbjct: 56 NGVKMVLIQQSNNPTPE-----DKPLRISGEPARVEKARQAVLVLINSRDRP 102
>gi|341038388|gb|EGS23380.1| hypothetical protein CTHT_0000680 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 553
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I + RPV +IG + A
Sbjct: 296 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GENKSVNGLRPVNLIGPPAATRIA 353
Query: 263 EKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQV---EIKVPNEKVGLIIGRGGETI 318
++LI ++ +++ G P+ RG G ++ I VP++ VG+IIG+GGETI
Sbjct: 354 KELILEIVDSDSRNGNLPN--PRGGRNDNFGGNGQEKVNDSIFVPSDAVGMIIGKGGETI 411
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
+ +Q +G +I + P G G ER + + G I A+ I++ + + VR + SG
Sbjct: 412 REMQNMTGCKINV---SQPSGPGEVEREIGLVGTREAIARAKRAIEDKV-EVVRQKSGSG 467
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 9/182 (4%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
IE+ + VG++IG+ G+ +R ++ + ++Q P+ R +I G ++A+
Sbjct: 202 IEIEASLVGLIIGRQGENLRRVEGETRCRVQFI--PPQGPNDQMRLCKIQGPRPQREEAK 259
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQ-VEIKVPNEKVGLIIGRGGETIKGLQ 322
++IN +I ++ G G A E V+I VP+ VGLIIGRGGETI+ LQ
Sbjct: 260 EMINRIIRDSGMRGPGERGRDGGRGPPAPKEGEDTVQIMVPDRTVGLIIGRGGETIRDLQ 319
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTL---SGG 379
RSG I ++ ++ + R V + G IA+E+I E++ R L GG
Sbjct: 320 ERSGCHINIVGENKSV---NGLRPVNLIGPPAATRIAKELILEIVDSDSRNGNLPNPRGG 376
Query: 380 FN 381
N
Sbjct: 377 RN 378
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D+T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G++
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I I I E P L + + + QA +QV+I VPN G+IIG+G
Sbjct: 123 EGIMTVVDFIMDKIRE-----KPDLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKG 177
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 178 GAFIKQIKEESGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 229
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++ +EVP +G ++G G ++ +Q+ SGA +QI++ P R V I G S I
Sbjct: 487 TKNVEVPEVIIGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIA 546
Query: 261 KAEKLINAVIAE 272
KA+ LI I E
Sbjct: 547 KAQYLIEQKINE 558
>gi|380490123|emb|CCF36233.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 603
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG+ + +A
Sbjct: 333 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGSRESAAQA 390
Query: 263 EKLINAVI-AEADAGGSPSLVARG--------LATAQASGAAEQVE--IKVPNEKVGLII 311
+ LI ++ +++ G P+ A+ A +G ++V I VP+E VG+II
Sbjct: 391 KDLIMEIVDSDSRNEGQPAAPAKKPPRQDGGHQRDAGPAGGGDKVHDAIYVPSEAVGMII 450
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
G+GGETI+ +Q +G +I + P G +R + + G I A++ I+E
Sbjct: 451 GKGGETIRDMQNGTGCKINVAQSSGP---GEVQREIALIGSRDSIARAKQAIEE 501
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 41/200 (20%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ S ++Q +D P R +I G + + +
Sbjct: 214 IQIESSLVGLIIGRQGENLRRIESESNCRVQFLPSSDNGPF---RQCKITGPRARRSEVK 270
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQA-------------------------------S 292
+ IN +I ++ G + RG A +
Sbjct: 271 EAINRIIDDSGMGA----INRGAANPKGPPPRDHRAGPPGGPGVGAGAGAGAGAGAAALR 326
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
+ ++I VP+ VGLIIGRGGETI+ LQ RSG I ++ + + R V + G
Sbjct: 327 DGEDCMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGS 383
Query: 353 MRQIEIAQEMIKEVLSQTVR 372
A+++I E++ R
Sbjct: 384 RESAAQAKDLIMEIVDSDSR 403
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG-DMRQIEI 358
I++ + VGLIIGR GE ++ +++ S R+Q LP D R ++TG R+ E
Sbjct: 214 IQIESSLVGLIIGRQGENLRRIESESNCRVQF----LPSSDNGPFRQCKITGPRARRSE- 268
Query: 359 AQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPP 394
+KE +++ + S + G N+ A P+ GPP
Sbjct: 269 ----VKEAINRIIDDSGM-GAINRGAANPK---GPP 296
>gi|413924552|gb|AFW64484.1| hypothetical protein ZEAMMB73_128588 [Zea mays]
Length = 473
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S+KIE+PN +VGV+IGK G+TIRY+Q SGAKIQ+TRD +A P A T VE+ G LS
Sbjct: 416 SKKIEIPNGRVGVIIGKVGETIRYIQLQSGAKIQVTRDHEAKPGALTMQVELSGNLS 472
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQH 335
+I++PN +VG+IIG+ GETI+ +Q +SGA+IQ+ H
Sbjct: 418 KIEIPNGRVGVIIGKVGETIRYIQLQSGAKIQVTRDH 454
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 45 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 104
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARG--LATAQASGAA-----EQVEIKVPNEKVG 308
+ ++ I I E P VA+ ++ Q +QV+I VPN G
Sbjct: 105 IEALNAVHGFIAEKIREM-----PQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAG 159
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
LIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 160 LIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 212
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 391 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 450
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 451 GTPAATQAAQYLI 463
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 394 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 450
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 451 GTPAATQAAQYLITQRITYEQGVR 474
>gi|358396212|gb|EHK45593.1| hypothetical protein TRIATDRAFT_317750 [Trichoderma atroviride IMI
206040]
Length = 569
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 13/178 (7%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ ++ ++Q D P R +I G +
Sbjct: 194 SETIQIESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF---RQCKITGPRARRA 250
Query: 261 KAEKLINAVIAEADAGG------SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+ + +N +I ++ G P ARG A A G + ++I VP+ VGLIIGRG
Sbjct: 251 EVKTAVNRIIEDSGMGALNRAQEKPRDPARGGAAALRDGE-DHMQIMVPDRTVGLIIGRG 309
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
GETI+ LQ RSG I ++ + + R V + G A++ I E++ R
Sbjct: 310 GETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGSREAAARAKDFIMEIVDSDSR 364
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 26/184 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG+ +A
Sbjct: 294 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGSREAAARA 351
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQAS-------------------GAAEQVE--IK 301
+ I ++ G P+ + A A + GAA+++ I
Sbjct: 352 KDFIMEIVDSDSRGDGPASGTKKPAGASRNDGPPRDYTGGGGGGGSGGGGAADKITDAIY 411
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP++ VG+IIG+GGETI+ +Q +G +I + P G +R + + G I A+
Sbjct: 412 VPSDAVGMIIGKGGETIREMQNVTGCKINVAQSSGP---GEVQREIALVGTRESIAQAKL 468
Query: 362 MIKE 365
I E
Sbjct: 469 AIDE 472
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 186 NSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA 245
N K++ ++T KI VP G +IGK G+TI LQ ++GA++++++ D P
Sbjct: 132 NYKTNSCWCYGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGT 191
Query: 246 ATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVP 303
R I G+ I + I I E P L + + T Q +QV+I VP
Sbjct: 192 TERVCLITGSTEAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVP 246
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
N G+IIG+GG IK ++ SG+ +Q+ P +ER + + GD + A +MI
Sbjct: 247 NSTAGMIIGKGGAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI 304
Query: 364 KEVLSQTV 371
LS+ V
Sbjct: 305 ---LSKIV 309
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARG--LATAQASGAA-----EQVEIKVPNEKVG 308
+ ++ I I E P VA+ ++ Q +QV+I VPN G
Sbjct: 106 IEALNAVHGFIAEKIREM-----PQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAG 160
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
LIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 161 LIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 213
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 392 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 451
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 452 GTPAATQAAQYLI 464
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 451
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 452 GTPAATQAAQYLITQRITYEQGVR 475
>gi|340515764|gb|EGR46016.1| predicted protein [Trichoderma reesei QM6a]
Length = 559
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ ++ ++Q D P R +I G + + +
Sbjct: 196 IQIESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF---RQCKITGPRARRAEVK 252
Query: 264 KLINAVIAEADAGG------SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
IN +I ++ G P ARG A A G + ++I VP+ VGLIIGRGGET
Sbjct: 253 TAINRIIEDSGMGALNRAQEKPRDPARGGAAALRDGE-DHMQIMVPDRTVGLIIGRGGET 311
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLS 377
I+ LQ RSG I ++ + + R V + G A++ I E++ R +
Sbjct: 312 IRDLQERSGCHINIVGESKSV---NGLRPVNLIGSREAAARAKDFIMEIVDSDSRGDGPA 368
Query: 378 GGFNQQAYRPRVPTGPPQ 395
G + P GPP+
Sbjct: 369 SGTKK-------PAGPPR 379
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG+ +A
Sbjct: 293 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGSREAAARA 350
Query: 263 EKLINAVIAEADAGGSPSLVARGLA----------TAQASGAAEQVE--IKVPNEKVGLI 310
+ I ++ G P+ + A G +++ I VP++ VG+I
Sbjct: 351 KDFIMEIVDSDSRGDGPASGTKKPAGPPRNDGPSRDYGGGGGPDKINDAIYVPSDAVGMI 410
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
IG+GGETI+ +Q +G +I + P G +R + + G I A++ I E
Sbjct: 411 IGKGGETIREMQNSTGCKINVAQSSGP---GEVQREIALIGTRDSIARAKQAIDE 462
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 137 ETKEVLFSTEEAFIDVKEETKEVT-VKEEETVKEEESVEPSNVVPQQVVD-NSKSDDPSS 194
ET L I++ E+K V ++ + E+ + ++VD +S+ D P+S
Sbjct: 310 ETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSREAAARAKDFIMEIVDSDSRGDGPAS 369
Query: 195 TDDS---------------------TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKI 233
++ I VP++ VG++IGK G+TIR +Q ++G KI
Sbjct: 370 GTKKPAGPPRNDGPSRDYGGGGGPDKINDAIYVPSDAVGMIIGKGGETIREMQNSTGCKI 429
Query: 234 QITRDADADPHAATRPVEIIGTLSNIDKAEKLIN 267
+ + + P R + +IGT +I +A++ I+
Sbjct: 430 NVAQ--SSGPGEVQREIALIGTRDSIARAKQAID 461
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 45 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 104
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARG--LATAQASGAA-----EQVEIKVPNEKVG 308
+ ++ I I E P VA+ ++ Q +QV+I VPN G
Sbjct: 105 IEALNAVHGFIAEKIREM-----PQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAG 159
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
LIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 160 LIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 212
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 391 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 450
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 451 GTPAATQAAQYLI 463
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 394 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 450
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 451 GTPAATQAAQYLITQRITYEQGVR 474
>gi|351695694|gb|EHA98612.1| Far upstream element-binding protein 1 [Heterocephalus glaber]
Length = 359
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S M+ + + P+ VG +IG+ G+ I +Q SG KIQI D+ P R + GT
Sbjct: 100 SVMTEEYKAPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE---RSCMLTGTPE 156
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A++L++ ++ + A G G A Q EI + K GL+IG+G ET
Sbjct: 157 SVQSAKQLLDQIVEKGRQ-------APGFHHGDGPGNAVQ-EIMISVNKAGLVIGKGRET 208
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
IK LQ R+G + +I Q P+ G+ ++ +R+TG+ +++ A+EM+ E++
Sbjct: 209 IKQLQERAGVKTVMI-QDGPQNTGA-DKPLRITGEPYKVQQAKEMVLELIC 257
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 16/168 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I + NK G++IGK +TI+ LQ +G K + +D + A +P+ I G + +A
Sbjct: 190 EIMISVNKAGLVIGKGRETIKQLQERAGVKTVMIQDGPQNT-GADKPLRITGEPYKVQQA 248
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQAS--GAAEQVEIKVPNEKVGLIIGRGGETIKG 320
++++ +I D GG R + S G E V++ +P VG++IGR GE IK
Sbjct: 249 KEMVLELIC--DQGG-----FREVRNEYGSRIGGNEGVDVPIPRFAVGVVIGRNGEMIKK 301
Query: 321 LQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
+Q +G RIQ P DG+ +RI ++T + + A E+I ++L
Sbjct: 302 IQNDAGVRIQFKPD-----DGTTPDRIAQITRPPDRCQHAAEIITDLL 344
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARG--LATAQASGAA-----EQVEIKVPNEKVG 308
+ ++ I I E P VA+ ++ Q +QV+I VPN G
Sbjct: 106 VEALNAVHGFIAEKIREM-----PQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAG 160
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
LIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 161 LIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 213
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 392 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 451
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 452 GTPAATQAAQYLI 464
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 451
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 452 GTPAATQAAQYLITQRITYEQGVR 475
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARG--LATAQASGAA-----EQVEIKVPNEKVG 308
+ ++ I I E P VA+ ++ Q +QV+I VPN G
Sbjct: 106 VEALNAVHGFIAEKIREM-----PQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAG 160
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
LIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 161 LIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 213
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 392 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 451
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 452 GTPAATQAAQYLI 464
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 451
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 452 GTPAATQAAQYLITQRITYEQGVR 475
>gi|15292111|gb|AAK93324.1| LD38872p [Drosophila melanogaster]
Length = 661
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 220 DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSP 279
DTI ++Q SG K+Q+ +D D R + + G + K ++I + A G
Sbjct: 7 DTITHIQAESGVKVQVMQDQD-------RVIMLRGQRDTVTKGREMIQNMANRAGGGQVE 59
Query: 280 SLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEG 339
L+ + SG EI +P KVGL+IG+GG+TIK LQ ++GA++ +I
Sbjct: 60 VLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQ------ 113
Query: 340 DGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 114 DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 146
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I + D +P+ I G I+
Sbjct: 78 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQ--DGPNQELIKPLRISGEAQKIEH 135
Query: 262 AEKLINAVIAEADA----------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
A++++ +IA+ DA GG G E E+ VP VG++I
Sbjct: 136 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 195
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 196 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 252
Query: 372 R 372
+
Sbjct: 253 Q 253
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 181 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 238
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 239 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 298
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 299 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 352
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 353 QMISEKINMEL 363
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
++D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I G
Sbjct: 55 SEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 114
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARG--LATAQASGAA-----EQVEIKVPNEKV 307
T+ ++ I I E P VA+ ++ Q +QV+I VPN
Sbjct: 115 TVEALNAVHGFIAEKIREM-----PQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTA 169
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 170 GLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 223
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 402 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 461
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 462 GTPAATQAAQYLI 474
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 405 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 461
Query: 351 GDMRQIEIAQEMIKEVLS--QTVRPS 374
G + AQ +I + ++ Q VR +
Sbjct: 462 GTPAATQAAQYLITQRITYEQGVRAA 487
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 186
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 187 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 246
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 247 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 287
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 486 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 541
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 542 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 577
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 501 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 560
Query: 263 EKLIN 267
+ LI+
Sbjct: 561 QYLIS 565
>gi|268576715|ref|XP_002643337.1| Hypothetical protein CBG15931 [Caenorhabditis briggsae]
Length = 840
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 27/174 (15%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG++IGK G + + +G ++Q++ + R VEI G NID A +
Sbjct: 167 IPELCVGLVIGKGGAEVHAINEKTGCRLQVSTEPSP---IGYRNVEIHGLPENIDAAREC 223
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQ---------VEIKVPNEKVGLIIGRGGE 316
I+ V+ SP A SGA Q VEI +P K G +IGRGG+
Sbjct: 224 ISQVLNRIH--HSPP--------APHSGAQRQEGETVKTVTVEIPIPAHKCGAVIGRGGD 273
Query: 317 TIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
T++ L++ S +IQLI ++ +P + + +R+TGD + +E AQ ++ EVL++
Sbjct: 274 TMQKLRSWSNCQIQLIQENSMP----TTTKPLRITGDQQSVEYAQRLVAEVLAK 323
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T++ +I +P +K G +IG+ GDT++ L+ S +IQ+ ++ ++ P T+P+ I G +
Sbjct: 252 TVTVEIPIPAHKCGAVIGRGGDTMQKLRSWSNCQIQLIQE-NSMP-TTTKPLRITGDQQS 309
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
++ A++L+ V+A+ + P A + + + +KVP VG I+G G I
Sbjct: 310 VEYAQRLVAEVLAKNEGPPPPKHEAPSAPPQETYYENKSLHVKVPRSSVGAIMGPQGMNI 369
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
K L ++ I ++P+ P+ ER++ + G ++ +A ++I+ +++ P
Sbjct: 370 KRLSDQTCTSIHVLPEEDPK---VMERLITIVGSPDKVYLAADVIRTIITSCNSP 421
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++VP + VG ++G G I+ L + I + + DP R + I+G+ +
Sbjct: 348 SLHVKVPRSSVGAIMGPQGMNIKRLSDQTCTSIHVL--PEEDPKVMERLITIVGSPDKVY 405
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
A +I +I + SP + + VP K GL+IG+GG+ IK
Sbjct: 406 LAADVIRTIITSCN---SPDYYVHNVYY-----------MDVPAAKCGLVIGKGGDVIKQ 451
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ SGAR +L + + D + V D+ QIE A+ +I
Sbjct: 452 INADSGARCELARE--TKMDAHFKTFVLRGTDL-QIEHAKHLI 491
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
V +P VGL+IG+GG + + ++G R+Q+ + P G R V + G I+
Sbjct: 163 VNFPIPELCVGLVIGKGGAEVHAINEKTGCRLQVSTEPSPIG----YRNVEIHGLPENID 218
Query: 358 IAQEMIKEVLSQT 370
A+E I +VL++
Sbjct: 219 AARECISQVLNRI 231
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 96/170 (56%), Gaps = 21/170 (12%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IG+ G+ I LQ +G KIQ+ ++ P R + G+ +++A++L+ +++ +
Sbjct: 92 VIGRGGEQITRLQSETGCKIQMAAESGGMPE---RTCTLTGSRDAVNRAKELVQSIVNQR 148
Query: 274 DAGGSPSL-------------VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
G + + + + +G VEI +P KVGLIIG+GGETIK
Sbjct: 149 VKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGETIKQ 208
Query: 321 LQTRSGARIQLIPQHLPEGDG-SKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ +SGA++ +I +G G +E+ +R+TGD +++E A++++ E++++
Sbjct: 209 LQEKSGAKMVVI----QDGPGQEQEKPLRITGDPQKVEHAKQLVYELIAE 254
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 46/202 (22%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P KVG++IGK G+TI+ LQ SGAK+ + +D +P+ I G ++ A
Sbjct: 187 EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQ--EKPLRITGDPQKVEHA 244
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ------------------------- 297
++L+ +IAE + L RG ++ + Q
Sbjct: 245 KQLVYELIAEKEM----QLYNRGTRNFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSW 300
Query: 298 ----------VEIK--VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKER 345
VE VP+ K G+IIG+GG TIK + ++GA +L ++ P D K
Sbjct: 301 EGNRPAGEGKVEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRN-PGTDTDKFF 359
Query: 346 IVRVTGDMRQIEIAQEMIKEVL 367
+R G Q+E A+ + E L
Sbjct: 360 TIR--GTPEQVEHAKRVFAEKL 379
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD---ADADPHAATRPVEIIGTLSNIDKA 262
VP+NK G++IGK G TI+ + +GA ++ R D D R GT ++ A
Sbjct: 317 VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIR-----GTPEQVEHA 371
Query: 263 EKLINAVIAEADAG-------GSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+++ + G P+ G G +V VP K G+IIG+GG
Sbjct: 372 KRVFAEKLGGGMGSSSNGYPTGRPN--EYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGG 429
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVL 367
ETIK + ++GA +L ++ G++ E+ + G Q+E AQ + E L
Sbjct: 430 ETIKQINQQTGAHCELDRRN----PGTETEKFFTIKGTPEQVEHAQRIFSEKL 478
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+IGRGGE I LQ+ +G +IQ+ E G ER +TG + A+E+++ +++Q
Sbjct: 92 VIGRGGEQITRLQSETGCKIQM----AAESGGMPERTCTLTGSRDAVNRAKELVQSIVNQ 147
Query: 370 TVRP 373
V+P
Sbjct: 148 RVKP 151
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 22 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 78
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 79 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 138
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 139 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 196
Query: 358 IAQEMI 363
A I
Sbjct: 197 KAVSAI 202
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 401 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 456
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 457 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 492
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 416 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 475
Query: 263 EKLIN 267
+ LI+
Sbjct: 476 QYLIS 480
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
+K S T+D+ + K+ +P+ VG LIGK G+T+R L+ SG ++Q++++ + P
Sbjct: 43 TKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTN 102
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA--RGLATAQASGAAEQVEIKVPN 304
R + G ++++ K +I I E +PS + +G+ ++++ VPN
Sbjct: 103 ERICLVKGKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMER------KNEMKLVVPN 156
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMI 363
G++IG+ G IK ++ ++GA IQ+ P+ E S+ERI+ + + Q E+ + +
Sbjct: 157 TSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAE--QDEVLMDAL 214
Query: 364 KEVLSQT 370
+ VL +
Sbjct: 215 QRVLEKV 221
>gi|195382107|ref|XP_002049773.1| GJ21777 [Drosophila virilis]
gi|194144570|gb|EDW60966.1| GJ21777 [Drosophila virilis]
Length = 831
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 100/179 (55%), Gaps = 20/179 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAG-DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
ST ++ +P + V +G++G DT+ +L+ SGAK+++ +D + R + + GT
Sbjct: 124 STCEEQVRIPESIVSAFVGRSGSDTLSHLEAESGAKLELMQDQE-------RVITLRGTR 176
Query: 257 SNIDKAEKLINAVIAEADAGGSPS---LVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
+ K +++ ++ GG+ + L+ + G EI +P KVGL+IG+
Sbjct: 177 ESCTKGREMLQQMVNRNGGGGNGTCEVLLTINMPPPGPGGYPPYQEIMIPGAKVGLVIGK 236
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
GG+TIK LQ ++GAR+ +I DG + ++ R++G +++E A++M+ ++++Q
Sbjct: 237 GGDTIKQLQEKTGARMIIIQ------DGPNQEVIKPLRISGVPQKVEHAKQMVLDLIAQ 289
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 19/184 (10%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH-AATRPVEIIGTLSNID 260
++I +P KVG++IGK GDTI+ LQ +GA++ I +D P+ +P+ I G ++
Sbjct: 221 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGARMIIIQDG---PNQEVIKPLRISGVPQKVE 277
Query: 261 KAEKLINAVIAEADA------------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVG 308
A++++ +IA+ DA G + E VE+ VP VG
Sbjct: 278 HAKQMVLDLIAQKDALAQQQQGGRSGGGTGGGGSDQSFNNFNNGSGGESVEVFVPKIAVG 337
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
++IG+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I ++
Sbjct: 338 VVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTIDGLIE 394
Query: 369 QTVR 372
++
Sbjct: 395 NVMQ 398
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT ++
Sbjct: 326 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVE 383
Query: 261 KAEKLINAVIAEA---------------------DAGGSPSLVARGLATAQASGAAEQVE 299
A++ I+ +I + S G A G E++
Sbjct: 384 DAKRTIDGLIENVMQRNGMNRNGNGGGGGGGSQGGGDSNNSNYGYGYGVNHAQGGREEIT 443
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQI 356
VP K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+
Sbjct: 444 FLVPASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQV 497
Query: 357 EIAQEMIKEVLSQTV 371
E A++MI E ++ +
Sbjct: 498 EAARQMISEKINMEL 512
>gi|378731630|gb|EHY58089.1| hypothetical protein HMPREF1120_06107 [Exophiala dermatitidis
NIH/UT8656]
Length = 540
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 12/246 (4%)
Query: 165 ETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRY 224
+ +++ E + P++V SKS ++T+ ++ ++ VP+ VG++IG+ G+TIR
Sbjct: 245 KVIEDHELAKRGQDKPREVRSQSKSTVVTTTEGDSL--QMMVPDRTVGLIIGRGGETIRD 302
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
LQ SG I I + RPV +IG+ S A LI ++ G S + R
Sbjct: 303 LQDRSGCHINIV--GENKSVNGMRPVNLIGSQSAQQYARDLILEIVESDQKGISIKDLHR 360
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
Q I VP E VG+IIG+ GE+I+ +Q ++G +I + P + G G E
Sbjct: 361 EREEPQGK---LNDSIVVPGEAVGMIIGKKGESIRDMQNQTGCKINVSPDN---GRGV-E 413
Query: 345 RIVRVTGDMRQIEIAQEMIKE-VLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHP 403
R + + G + +E A+ I E V + R G + Y R T P + P G
Sbjct: 414 REIGLVGTRQAVEAAKRAIMEKVDAVRARIQGREGRDGRDDYADRYSTQPATYPPTGVPA 473
Query: 404 SQPMAY 409
P +Y
Sbjct: 474 GPPASY 479
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 27/195 (13%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
D S+ D + DS + + + + VG++IG+AG+ +R ++ +GA++Q D
Sbjct: 167 DRSQGGDRGAEGDSEV---LPLDKSVVGLIIGRAGENLRRVENTTGARVQFL---DGPEV 220
Query: 245 AAT-RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG-----------LATAQAS 292
A T R I G+ S+ A+ I VI + + L RG +T +
Sbjct: 221 AGTQRHCRISGSRSSRAAAKAEIFKVIEDHE------LAKRGQDKPREVRSQSKSTVVTT 274
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
+ +++ VP+ VGLIIGRGGETI+ LQ RSG I ++ ++ + R V + G
Sbjct: 275 TEGDSLQMMVPDRTVGLIIGRGGETIRDLQDRSGCHINIVGENKSV---NGMRPVNLIGS 331
Query: 353 MRQIEIAQEMIKEVL 367
+ A+++I E++
Sbjct: 332 QSAQQYARDLILEIV 346
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 162 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 221
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 222 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 281
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 282 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 322
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 521 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 576
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 577 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 612
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 536 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 595
Query: 263 EKLIN 267
+ LI+
Sbjct: 596 QYLIS 600
>gi|308812151|ref|XP_003083383.1| putative RNA binding protein with KH domain(s) family member (65.6
kD) (ISS) [Ostreococcus tauri]
gi|116055263|emb|CAL57659.1| putative RNA binding protein with KH domain(s) family member (65.6
kD) (ISS), partial [Ostreococcus tauri]
Length = 377
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
D + ++ I P G +IG G+ I +Q SGA ++I +D P R V I G
Sbjct: 53 MDPNAITEYIMCPPESAGKVIGHGGEKINGIQSESGAVVKIQNQSDVGPGQPRR-VTISG 111
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEK--VGLIIG 312
+ A +L+ A+I ++ G+ RG A A+ AA Q E+ VP E G IIG
Sbjct: 112 LPDRVAHASQLVYALIGDS---GARRAAPRGAVGAPAT-AAPQTEVFVPVESTDFGKIIG 167
Query: 313 RGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERI----VRVTGDMRQIEIAQEMIKE 365
RGG+TI+ LQ SGAR+Q+ + L GD V +TGD E+A+ +++E
Sbjct: 168 RGGDTIRRLQEESGARMQVDRPNSGVLITGDAXXXXXXXXGVLITGDASGCEVARTLLQE 227
Query: 366 VL 367
VL
Sbjct: 228 VL 229
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 31/173 (17%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR-------DADADPHAATRP-VEIIGT 255
+ V + G +IG+ GDTIR LQ SGA++Q+ R DA V I G
Sbjct: 155 VPVESTDFGKIIGRGGDTIRRLQEESGARMQVDRPNSGVLITGDAXXXXXXXXGVLITGD 214
Query: 256 LSNIDKAEKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
S + A L+ V+ A+ D GG PS A G + G IIG+G
Sbjct: 215 ASGCEVARTLLQEVLDAQDDRGGGPSSSII-SIEIDAQG------------QEGRIIGKG 261
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GE I+ L ++GA++Q+I + +++++G I+ A ++ E +
Sbjct: 262 GENIRSLSQQTGAKLQII---------KETGMLKISGTQEVIDEAVRVVNEFI 305
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARG--LATAQASGAA-----EQVEIKVPNEKVG 308
+ ++ I I E P VA+ ++ Q +QV+I VPN G
Sbjct: 106 VEALNAVHGFIAEKIREM-----PQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAG 160
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
LIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 161 LIIGKGGATVKAVMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 213
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 392 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 451
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 452 GTPAATQAAQYLI 464
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 395 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 451
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 452 GTPAATQAAQYLITQRITYEQGVR 475
>gi|156056018|ref|XP_001593933.1| hypothetical protein SS1G_05361 [Sclerotinia sclerotiorum 1980]
gi|154703145|gb|EDO02884.1| hypothetical protein SS1G_05361 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 176 SNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
S+ P+Q + S + D S +I VP+ VG++IG+ G+TIR LQ SG + I
Sbjct: 266 SDRAPRQDNNTRDSSHQPALRDGEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNI 325
Query: 236 TRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA------------ 283
+ RPV +IGT A+ LI ++ E+D+ +P A
Sbjct: 326 V--GEQKSVNGLRPVNLIGTREAAAMAKDLIMEIV-ESDSKSAPKERAPAPRENNRDAGY 382
Query: 284 RGLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG 341
G + G +++ I VP+E VG+IIG+GGETIK +Q +G +I + P G
Sbjct: 383 GGAYGSGGGGQGDKINDSIFVPSEAVGMIIGKGGETIKDMQNTTGCKINVTQSSGP---G 439
Query: 342 SKERIVRVTGDMRQIEIAQEMIKE 365
ER + + G + I A+ I++
Sbjct: 440 EVEREIGLVGSQQAIAAAKRAIED 463
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I + +N VG++IG+ G+ +R ++ +G ++Q D R +I G + A+
Sbjct: 193 ISIESNLVGLIIGRQGENLRRVESETGCRVQFI--TGPDETGPFRTCKITGPRARRADAK 250
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASG-------AAEQVEIKVPNEKVGLIIGRGGE 316
I +I ++ G R + S + ++I VP+ VGLIIGRGGE
Sbjct: 251 AEITRIIDDSGLGPLSDRAPRQDNNTRDSSHQPALRDGEDSMQIMVPDRTVGLIIGRGGE 310
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
TI+ LQ RSG + ++ + + + R V + G +A+++I E++
Sbjct: 311 TIRDLQERSGCHVNIVGE---QKSVNGLRPVNLIGTREAAAMAKDLIMEIV 358
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 96 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 155
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 156 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 196
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 34/204 (16%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD------------ADADPH 244
D K+ VPN+ G++IGK G T++ + SGA +Q+++ +P
Sbjct: 128 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 187
Query: 245 AATRPVEII----------GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGA 294
+ V I + NI A + +A ++ GSP LA A A
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYAN--VAGPVANSNPTGSPYASPADLA---AESA 242
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTGD 352
E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP G++ R V +TG
Sbjct: 243 KELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP---GTRNRRVTITGS 299
Query: 353 MRQIEIAQEMIKEVLS--QTVRPS 374
+ AQ +I + ++ Q VR S
Sbjct: 300 PAATQAAQYLISQRVTYEQGVRAS 323
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 72
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 73 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 132
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 133 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQV 189
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 51/221 (23%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD------------ADADPH 244
D K+ VPN+ G++IGK G T++ + SGA +Q+++ +P
Sbjct: 128 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE 187
Query: 245 AATRPVEII----------GTLSNIDKAEKLINAVIAEADAGGSP--------------- 279
+ V I + NI A + +A ++ GSP
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYAN--VAGPVANSNPTGSPYASPADVLPAAAGAA 245
Query: 280 --SLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QH 335
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 246 GGFLTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEF 302
Query: 336 LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
LP G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 303 LP---GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 340
>gi|195025431|ref|XP_001986058.1| GH21156 [Drosophila grimshawi]
gi|193902058|gb|EDW00925.1| GH21156 [Drosophila grimshawi]
Length = 842
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 98/181 (54%), Gaps = 22/181 (12%)
Query: 198 STMSRKIEVPNNKVGVLIGKAG-DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
ST ++ +P + V +G++G DT+ +L+ SGAK+++ +D + R + + GT
Sbjct: 124 STCEEQVRIPESIVSSFVGRSGSDTLSHLEAESGAKLELMQDQE-------RVITLRGTR 176
Query: 257 SNIDKAEKLINAVIAEADAG-----GSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+ K +++ ++ AG L+ + G EI +P KVGL+I
Sbjct: 177 ESCTKGREMLEQMVGRNGAGGNGNGSCEVLLTINMPPPGPGGYPPYQEIMIPGAKVGLVI 236
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLS 368
G+GG+TIK LQ ++GAR+ +I DG + ++ R++G +++E A++M+ ++++
Sbjct: 237 GKGGDTIKQLQEKTGARMIIIQ------DGPNQEVIKPLRISGVPQKVEHAKQMVLDLIA 290
Query: 369 Q 369
Q
Sbjct: 291 Q 291
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 23/189 (12%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GA++ I +D +P+ I G ++
Sbjct: 223 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGARMIIIQDGP--NQEVIKPLRISGVPQKVEH 280
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQAS------------------GAAEQVEIKVP 303
A++++ +IA+ DA E VE+ VP
Sbjct: 281 AKQMVLDLIAQKDALSQQQQGGGRSGGGSGGGGGGGGGSEPNFNNFNNGSGGESVEVFVP 340
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
VG++IG+GG+ I+ +QT G ++Q I + D +R + G +Q+E A+ I
Sbjct: 341 KIAVGVVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDAKRTI 397
Query: 364 KEVLSQTVR 372
++ ++
Sbjct: 398 DGLIENVMQ 406
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 32/195 (16%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT ++
Sbjct: 334 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVE 391
Query: 261 KAEKLINAVIAEA---------------------DAGGSPSLVARGLATAQASGAAEQVE 299
A++ I+ +I + S G A G E++
Sbjct: 392 DAKRTIDGLIENVMQRNGMNRNGNGGGNGGGGQGGGDSNNSNYGYGYGVNHAQGGREEIT 451
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQI 356
VP K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+
Sbjct: 452 FLVPASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGSTDQV 505
Query: 357 EIAQEMIKEVLSQTV 371
E A++MI E ++ +
Sbjct: 506 EAARQMISEKINMEL 520
>gi|403264854|ref|XP_003924682.1| PREDICTED: RNA-binding protein Nova-1 [Saimiri boliviensis
boliviensis]
Length = 595
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 134 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 193
Query: 256 LSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGLATA----------- 289
+ ++ I I E +P + + L ++
Sbjct: 194 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 253
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
+ A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V
Sbjct: 254 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTV 311
Query: 350 TGDMRQIEIAQEMI 363
+G+ Q A E+I
Sbjct: 312 SGEPEQNRKAVELI 325
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 504 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 563
Query: 254 GTLSNIDKAEKLIN 267
GT + A+ LI
Sbjct: 564 GTPAATQAAQYLIT 577
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 507 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 563
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 564 GTPAATQAAQYLITQRITYEQGVR 587
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 219 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 278
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 279 GATVKAIMEQSGAWVQLSQKPD 300
>gi|47223865|emb|CAG06042.1| unnamed protein product [Tetraodon nigroviridis]
Length = 692
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI 252
S S ++ + VP+ VG++IG+ G+ I +Q SG K+Q D P R V +
Sbjct: 120 CSVGSSALTEECSVPDAMVGLIIGRGGEQINKIQQESGCKVQFAHDTAGLPE---RRVSL 176
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
G+ I +A+ LI+ +V+RG + + E+ +P K GLIIG
Sbjct: 177 TGSPDAIQRAKALID------------DIVSRGHDSPNGQPGSMH-EMIIPAGKAGLIIG 223
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSK----ERIVRVTGDMRQIEI 358
RGGETIK LQ R+G ++ LI DGS+ ++ +R+ GD ++++
Sbjct: 224 RGGETIKQLQERAGVKMILIQ------DGSQPPNIDKPLRIIGDPYKVQV 267
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 40/197 (20%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG----------- 254
+P K G++IG+ G+TI+ LQ +G K+ + +D P+ +P+ IIG
Sbjct: 213 IPAGKAGLIIGRGGETIKQLQERAGVKMILIQDGSQPPNI-DKPLRIIGDPYKVQVLFGK 271
Query: 255 -----TLSN-------------IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE 296
L N + +A++++N ++ E D G R ++ G
Sbjct: 272 GFLLVALGNHLTYELWGIFFLLLQQAKEMVNEILRERDHAGFGD---RNEYGSRMGGGGS 328
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQ 355
+ I VP VG++IGR GE IK +Q+ +G +IQ P DG+ E++ + G +
Sbjct: 329 GLNIAVPRHSVGVVIGRNGEMIKKIQSDAGVKIQFKPD-----DGTGPEKMALIMGPADR 383
Query: 356 IEIAQEMIKEVLSQTVR 372
+ A +I ++L Q+VR
Sbjct: 384 CQHAASIITDLL-QSVR 399
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP + VGV+IG+ G+ I+ +Q ++G KIQ D P + I+G A
Sbjct: 332 IAVPRHSVGVVIGRNGEMIKKIQSDAGVKIQFKPDDGTGPE---KMALIMGPADRCQHAA 388
Query: 264 KLINAVIAEADA-----GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+I ++ A GG G ++ VP K GL+IGRGGE +
Sbjct: 389 SIITDLLQSVRAREEGGGGPGMPPGGQGHGRGQGGWGGEMAFSVPAHKCGLVIGRGGENV 448
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K + ++GA +++ Q P GD ++ + G +QI+ A+++I+E
Sbjct: 449 KSINQQTGAFVKMTHQPPPNGD-PNFKLFTIRGSPQQIDHAKQLIEE 494
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 231 AKIQITRDADADPHAATRP-VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATA 289
A + + R AD + P V+ + + S ID + +N + E +A +LV L
Sbjct: 64 ATVCLYRQADLLLLFSDGPEVKKVASQSEIDSSLWDVNTFLLEFEA---HALVMYVLFVC 120
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
+A E VP+ VGLIIGRGGE I +Q SG ++Q + G ER V +
Sbjct: 121 SVGSSALTEECSVPDAMVGLIIGRGGEQINKIQQESGCKVQFA----HDTAGLPERRVSL 176
Query: 350 TGDMRQIEIAQEMIKEVLSQ 369
TG I+ A+ +I +++S+
Sbjct: 177 TGSPDAIQRAKALIDDIVSR 196
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 72
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 73 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 132
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 133 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 190
Query: 358 IAQEMI 363
A I
Sbjct: 191 KAVSAI 196
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 395 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 450
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + +S Q VR S
Sbjct: 451 --GTRNRRVTITGSPAATQAAQYLISQRVSYEQGVRAS 486
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 263 EKLIN 267
+ LI+
Sbjct: 470 QYLIS 474
>gi|334310485|ref|XP_001369484.2| PREDICTED: RNA-binding protein Nova-1-like [Monodelphis domestica]
Length = 731
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 28/198 (14%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
PS+ +D K+ +P+ G +IGK G TI LQ +GA I++++ D P R
Sbjct: 266 PSNPEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 325
Query: 252 IIGTLSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGLATA------- 289
I GT+ ++ I I E +P + + L ++
Sbjct: 326 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSS 385
Query: 290 ----QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKER 345
+ A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER
Sbjct: 386 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQER 443
Query: 346 IVRVTGDMRQIEIAQEMI 363
+V V+G+ Q A E+I
Sbjct: 444 VVTVSGEPEQNRKAVELI 461
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 640 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 699
Query: 254 GTLSNIDKAEKLIN 267
GT + A+ LI
Sbjct: 700 GTPAATQAAQYLIT 713
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQ--HLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 643 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 699
Query: 351 GDMRQIEIAQEMIKEVLS 368
G + AQ +I + ++
Sbjct: 700 GTPAATQAAQYLITQRIT 717
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 355 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 414
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 415 GATVKAIMEQSGAWVQLSQKPD 436
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 7 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 66
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 67 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 126
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 127 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 167
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 72
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 73 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 132
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 133 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 190
Query: 358 IAQEMI 363
A I
Sbjct: 191 KAVSAI 196
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 395 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 450
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 451 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 486
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 263 EKLIN 267
+ LI+
Sbjct: 470 QYLIS 474
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 72
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 73 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 132
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 133 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 190
Query: 358 IAQEMI 363
A I
Sbjct: 191 KAVSAI 196
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 395 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 450
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 451 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 486
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 263 EKLIN 267
+ LI+
Sbjct: 470 QYLIS 474
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 72
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 73 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 132
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 133 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 190
Query: 358 IAQEMI 363
A I
Sbjct: 191 KAVSAI 196
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 395 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 450
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 451 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 486
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 263 EKLIN 267
+ LI+
Sbjct: 470 QYLIS 474
>gi|320542558|ref|NP_001189200.1| pasilla, isoform L [Drosophila melanogaster]
gi|318068744|gb|ADV37291.1| pasilla, isoform L [Drosophila melanogaster]
Length = 758
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
+ N K++ ++T KI VP G +IGK G+TI LQ ++GA++++++ D P
Sbjct: 236 LGNYKTNSCWCYGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYP 295
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIK 301
R I G+ I + I I E P L + + T Q +QV+I
Sbjct: 296 GTTERVCLITGSTEAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKIL 350
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VPN G+IIG+GG IK ++ SG+ +Q+ P +ER + + GD + A +
Sbjct: 351 VPNSTAGMIIGKGGAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACK 408
Query: 362 MIKEVLSQTV 371
MI LS+ V
Sbjct: 409 MI---LSKIV 415
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 665 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 720
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 721 TITGQPSAIAKAQYLIEQKINE 742
>gi|197127216|gb|ACH43714.1| putative neuro-oncological ventral antigen 1-like protein
[Taeniopygia guttata]
Length = 220
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 46 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 256 LSNIDKAEKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
+ ++ I I E A P + + T +QV+I VPN GLIIG
Sbjct: 106 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD-RIKQVKIIVPNSTAGLIIG 164
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+GG T+K + +SGA +QL P+G +ER+V V+G+ Q A E+I
Sbjct: 165 KGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQNRKAVELI 213
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 95/215 (44%), Gaps = 32/215 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 44 RFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKA 103
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE---QVEIKVPNEKVGLIIGRGGETIK 319
+LI + + LA + S AE +V + VPN G IIG+GG TIK
Sbjct: 104 MELI---------------LEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIK 148
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSG 378
S A I++ PQ G +R+V VTG + A +I LS+ V P LS
Sbjct: 149 SFIEDSHAGIKISPQD-NNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSS 207
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQ 413
F P G P S+P P+ Y PQ
Sbjct: 208 PF------PYAGLGFP------SYPGVPVGYMIPQ 230
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A + + I + +E +G ++GR G I + SGARI++ + GD G+ ER V +T
Sbjct: 265 AQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDFIAGTSERKVTIT 320
Query: 351 GDMRQIEIAQEMIKE 365
G I+ A+ MI +
Sbjct: 321 GTSEAIQAAESMIMQ 335
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
+ +D+ S I + + +G ++G+AG I + SGA+I+I+ D + R V I
Sbjct: 261 ANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTIT 320
Query: 254 GTLSNIDKAEKLI 266
GT I AE +I
Sbjct: 321 GTSEAIQAAESMI 333
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 11 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 67
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 68 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 127
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 128 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 185
Query: 358 IAQEMI 363
A I
Sbjct: 186 KAVSAI 191
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 390 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 445
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 446 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 481
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 405 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 464
Query: 263 EKLIN 267
+ LI+
Sbjct: 465 QYLIS 469
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 72
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 73 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 132
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 133 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 190
Query: 358 IAQEMI 363
A I
Sbjct: 191 KAVSAI 196
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 395 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 450
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 451 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 486
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 263 EKLIN 267
+ LI+
Sbjct: 470 QYLIS 474
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P +VV +S+ + ++ K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 80 PPEVVCTKRSN---TGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSK 136
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQ 297
D P R + GT ++ I + E + V L T A+Q
Sbjct: 137 DFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ 196
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 197 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVH 254
Query: 358 IAQEMI 363
A I
Sbjct: 255 KAVSAI 260
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 459 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 514
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 515 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 550
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 474 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 533
Query: 263 EKLIN 267
+ LI+
Sbjct: 534 QYLIS 538
>gi|320165866|gb|EFW42765.1| hypothetical protein CAOG_07897 [Capsaspora owczarzaki ATCC 30864]
Length = 556
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 27/185 (14%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
VP++ +G++IG+ G+TIR ++ +G ++Q +D ++ R V I G I+ A+
Sbjct: 102 FSVPSHTIGLIIGRQGETIRRIESQTGVRVQCAQDGGSN----DRVVTISGPAEGIELAK 157
Query: 264 KLINAVIAEADAGGSPSLV--------------------ARGLATAQASGA-AEQVEIKV 302
+I +I + D S A G T SG AE + +
Sbjct: 158 SMIREIIFKDDRVASAHGAGHGGSHGGPHGGSHGGAAPWATGANTMPVSGGGAEPFIMMI 217
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
P +VGL+IGR G+ I+ ++ R+GAR+Q+I LP + E+ + +TG IE A+ +
Sbjct: 218 PTSRVGLVIGRSGDKIREIEARTGARLQMIQHGLPR--DATEKPLHITGTQTVIEAAKLL 275
Query: 363 IKEVL 367
++E +
Sbjct: 276 VEEAI 280
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 160 TVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAG 219
TV E + EE++ P +D + + S + ++VP G ++G+ G
Sbjct: 267 TVIEAAKLLVEEAIRP--------LDQAGAGFGGSAAVGGTTLDVQVPREFTGAVLGERG 318
Query: 220 DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSP 279
DTI+ LQ+++G +IQ D AA R +++ G S +AE I +I EA
Sbjct: 319 DTIKRLQHDTGTRIQFR---SGDDGAAIRTLQVTGEESATRRAEAAIQVIIEEARNRRPG 375
Query: 280 SLVARGLATAQASGAAE-----------------QVEIKVPNEKVGLIIGRGGETIKGLQ 322
S V S + +++ VP GL+IG+ GE +K ++
Sbjct: 376 SRVEYSGGGGSGSFGSASFSGSGSGGYSARSGHTNIQVAVPARITGLVIGKSGENVKYME 435
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+GARIQL P + E+ V+G+ +E AQ M++E ++
Sbjct: 436 QATGARIQLNKDAPPN---AVEKFFNVSGEAAAVEAAQNMLRERIN 478
>gi|449299068|gb|EMC95082.1| hypothetical protein BAUCODRAFT_25198 [Baudoinia compniacensis UAMH
10762]
Length = 577
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I V + VG++IG+ G+ +R ++ +GA++Q + D+ H R I G+L + A+
Sbjct: 181 IRVKSALVGLIIGRNGENLRKVESETGARVQFIQAKDS--HVPERQCTISGSLRAREGAK 238
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAE-----------QVEIKVPNEKVGLIIG 312
I ++I E GG +G T G A+ ++ VP++ VGLIIG
Sbjct: 239 AAIFSIIEEN--GGQNVAQEKGAYTPGMPGRAKVNLPALREGENSTQVMVPDKTVGLIIG 296
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
RGGETIK LQ RSG + ++ ++ + R V + G +A+E+I E++ R
Sbjct: 297 RGGETIKDLQERSGCHVNIVGENKSV---NGLRPVNLIGSESATAMAKELILEIVESDNR 353
Query: 373 PST 375
++
Sbjct: 354 AAS 356
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 22/186 (11%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP+ VG++IG+ G+TI+ LQ SG + I + RPV +IG+ S
Sbjct: 281 STQVMVPDKTVGLIIGRGGETIKDLQERSGCHVNIV--GENKSVNGLRPVNLIGSESATA 338
Query: 261 KAEKLINAVIAEAD---AGGS--PSLVARGLATAQASGAAE---------QVEIKVPNEK 306
A++LI ++ E+D A GS PS RG +G + I VP+E
Sbjct: 339 MAKELILEIV-ESDNRAASGSAPPSNRDRGFGNNDRNGGGGGGGGGRDYIEKTIHVPSEA 397
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VG+IIG+GGETIK +Q +G +I + P+ R + + G R + A+ +I E
Sbjct: 398 VGMIIGKGGETIKDMQRTTGCKINVNQPVRPD----VTRKIDLAGTSRSMAEAERIIWEK 453
Query: 367 LSQTVR 372
+ +TVR
Sbjct: 454 V-ETVR 458
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+ + I VP+ VG++IGK G+TI+ +Q +G KI + + D TR +++ GT ++
Sbjct: 387 IEKTIHVPSEAVGMIIGKGGETIKDMQRTTGCKINVNQPVRPD---VTRKIDLAGTSRSM 443
Query: 260 DKAEKLI 266
+AE++I
Sbjct: 444 AEAERII 450
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 13/174 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VP G +IGK G+TI LQ ++GA++++++ D P R + G++ I
Sbjct: 71 KILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEAIMAV 130
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQ-----ASGAAEQVEIKVPNEKVGLIIGRGGET 317
I I E P L ++ + T+ ++ ++QV+I +PN G+IIG+GG
Sbjct: 131 MSFIMDKIKE-----KPDLTSKAINTSDTESKLSADRSKQVKILIPNSTAGMIIGKGGNY 185
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
IK ++ SG+ IQL + +ER V + G+M E ++ I ++L++ V
Sbjct: 186 IKQMKEESGSYIQLSQKSNDASLQLQERCVTIIGEM---ENNKKAILKLLAKVV 236
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ + ++ S ++ S D S KI +PN+ G++IGK G+ I+ ++ SG+ IQ+++
Sbjct: 144 LTSKAINTSDTESKLSADRSK-QVKILIPNSTAGMIIGKGGNYIKQMKEESGSYIQLSQK 202
Query: 239 A-DADPHAATRPVEIIGTLSNIDKA-EKLINAVIAEADAGGSPSL 281
+ DA R V IIG + N KA KL+ V+ + +G ++
Sbjct: 203 SNDASLQLQERCVTIIGEMENNKKAILKLLAKVVEDPQSGSCLNV 247
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRV 349
G ++I VP G IIG+GGETI LQ +GAR+++ + D + ER+ V
Sbjct: 65 GIVYHLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKAN----DFYPCTTERVCLV 120
Query: 350 TGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFN 381
TG + I I + + + +P S N
Sbjct: 121 TGSVEAIMAVMSFIMDKIKE--KPDLTSKAIN 150
>gi|429892650|gb|AGA18870.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I + D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQ--DGPNQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADA----------GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
A++++ +IA+ DA GG G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGXXXXXXXXXXXXXXXXXXX------- 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXXXKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
>gi|346974117|gb|EGY17569.1| KH domain-containing protein [Verticillium dahliae VdLs.17]
Length = 589
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 15/173 (8%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I IT ++A RPV +IG+ A
Sbjct: 322 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIT--SEAKSTNGLRPVNLIGSPQAAAMA 379
Query: 263 -EKLINAVIAEADAGGSPSLVARG-------LATAQASGAAEQVE--IKVPNEKVGLIIG 312
E ++ V +++ G P RG + G +++ I VP+E VG+IIG
Sbjct: 380 KEAILEIVDSDSRGDGQPVPPKRGPRQDNSRDGPSGGGGGHDKINDTIHVPSEAVGMIIG 439
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
+GGETI+ +Q +G +I + P G ER + + G I A+ I+E
Sbjct: 440 KGGETIREMQNNTGCKINVAQSSGP---GEVEREIALIGSRESITQAKAAIEE 489
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 23/182 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ SG ++Q D P+ R +I G + +
Sbjct: 221 IQIESSLVGLIIGRQGENLRRIEGESGCRVQFMPSTDGGPY---RSCKISGPRPRRAEVK 277
Query: 264 KLINAVIAEADAGGSPSLVARGLATA-----QASGAA--------EQVEIKVPNEKVGLI 310
IN +I ++ S++ RG A +A G + ++I VP+ VGLI
Sbjct: 278 TAINRIIEDSGM----SVINRGGALKSQGDPRAGGMGGPAPKEGEDCLQIMVPDRTVGLI 333
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IGRGGETI+ LQ RSG I + + + R V + G + +A+E I E++
Sbjct: 334 IGRGGETIRDLQERSGCHINITSEAKST---NGLRPVNLIGSPQAAAMAKEAILEIVDSD 390
Query: 371 VR 372
R
Sbjct: 391 SR 392
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 185 DNSKSDDPSSTDDS--TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADAD 242
DNS+ D PS ++ I VP+ VG++IGK G+TIR +Q N+G KI + + +
Sbjct: 407 DNSR-DGPSGGGGGHDKINDTIHVPSEAVGMIIGKGGETIREMQNNTGCKINVAQ--SSG 463
Query: 243 PHAATRPVEIIGTLSNIDKAEKLI 266
P R + +IG+ +I +A+ I
Sbjct: 464 PGEVEREIALIGSRESITQAKAAI 487
>gi|154310385|ref|XP_001554524.1| hypothetical protein BC1G_07112 [Botryotinia fuckeliana B05.10]
Length = 553
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 23/186 (12%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IGT
Sbjct: 284 DGEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GEQKSVNGLRPVNLIGTR 341
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVA---------------RGLATAQASGAAEQVE-- 299
A+ LI ++ E+D+ +P A A G +++
Sbjct: 342 EAAAMAKDLIMEIV-ESDSKSAPKERAPAPRENNRDAGYGGGYASGGAGGGGQGDKINDS 400
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I VP+E VG+IIG+GGETIK +Q +G +I + P G ER + + G + I A
Sbjct: 401 IFVPSEAVGMIIGKGGETIKDMQNTTGCKINVTQSSGP---GEVEREIGLVGSQQAIAAA 457
Query: 360 QEMIKE 365
+ I++
Sbjct: 458 KRAIED 463
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I + +N VG++IG+ G+ +R ++ +G ++Q D R +I G + A+
Sbjct: 190 ISIESNLVGLIIGRQGENLRRVESETGCRVQFI--TGPDETGPFRTCKITGPRARRADAK 247
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASG-------AAEQVEIKVPNEKVGLIIGRGGE 316
I +I ++ G R + S + ++I VP+ VGLIIGRGGE
Sbjct: 248 AEITRIIDDSGLGPLSDRAPREQNATRDSSHQPALRDGEDSMQIMVPDRTVGLIIGRGGE 307
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
TI+ LQ RSG + ++ + + R V + G +A+++I E++
Sbjct: 308 TIRDLQERSGCHVNIVGEQKSV---NGLRPVNLIGTREAAAMAKDLIMEIV 355
>gi|347828793|emb|CCD44490.1| hypothetical protein [Botryotinia fuckeliana]
Length = 550
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 23/186 (12%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IGT
Sbjct: 284 DGEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GEQKSVNGLRPVNLIGTR 341
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVA---------------RGLATAQASGAAEQVE-- 299
A+ LI ++ E+D+ +P A A G +++
Sbjct: 342 EAAAMAKDLIMEIV-ESDSKSAPKERAPAPRENNRDAGYGGGYASGGAGGGGQGDKINDS 400
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I VP+E VG+IIG+GGETIK +Q +G +I + P G ER + + G + I A
Sbjct: 401 IFVPSEAVGMIIGKGGETIKDMQNTTGCKINVTQSSGP---GEVEREIGLVGSQQAIAAA 457
Query: 360 QEMIKE 365
+ I++
Sbjct: 458 KRAIED 463
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I + +N VG++IG+ G+ +R ++ +G ++Q D R +I G + A+
Sbjct: 190 ISIESNLVGLIIGRQGENLRRVESETGCRVQFI--TGPDETGPFRTCKITGPRARRADAK 247
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASG-------AAEQVEIKVPNEKVGLIIGRGGE 316
I +I ++ G R + S + ++I VP+ VGLIIGRGGE
Sbjct: 248 AEITRIIDDSGLGPLSDRAPREQNATRDSSHQPALRDGEDSMQIMVPDRTVGLIIGRGGE 307
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
TI+ LQ RSG + ++ + + R V + G +A+++I E++
Sbjct: 308 TIRDLQERSGCHVNIVGEQKSV---NGLRPVNLIGTREAAAMAKDLIMEIV 355
>gi|310798116|gb|EFQ33009.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 592
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 18/181 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D +I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG+
Sbjct: 316 DGEDCMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGSR 373
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVA------RGLATAQAS----GAAEQVE--IKVPN 304
+ +A+ LI ++ E+D+ VA R A Q G +++ I VP+
Sbjct: 374 ESAAQAKDLIMEIV-ESDSRNDGQPVAPSKKPPRQDAGHQRDSGPGGGPDKIHDAIYVPS 432
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
E VG+IIG+GGETI+ +Q +G +I + P G +R + + G I A++ I+
Sbjct: 433 EAVGMIIGKGGETIRDMQNGTGCKINVAQSSGP---GEVQREIALIGSRDSITRAKQAIE 489
Query: 365 E 365
E
Sbjct: 490 E 490
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 32/191 (16%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ S ++Q +D P R +I G + + +
Sbjct: 212 IQIESSLVGLIIGRQGENLRRIESESTCRVQFLPSSDNGPF---RQCKITGPRARRAEVK 268
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQA----------------------SGAAEQVEIK 301
+ IN +I ++ G + RG A + + ++I
Sbjct: 269 EAINRIIDDSGMGA----INRGAANPKGPAPRDNRAGPPGGAAAAGAAALRDGEDCMQIM 324
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP+ VGLIIGRGGETI+ LQ RSG I ++ + + R V + G A++
Sbjct: 325 VPDRTVGLIIGRGGETIRDLQERSGCHINIVGES---KSVNGLRPVNLIGSRESAAQAKD 381
Query: 362 MIKEVLSQTVR 372
+I E++ R
Sbjct: 382 LIMEIVESDSR 392
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I++ + VGLIIGR GE ++ +++ S R+Q LP D R ++TG +
Sbjct: 212 IQIESSLVGLIIGRQGENLRRIESESTCRVQF----LPSSDNGPFRQCKITGPRARRAEV 267
Query: 360 QEMIKEVLSQTVRPSTLSGGFNQQAYRPR 388
+E I ++ + + G N + PR
Sbjct: 268 KEAINRIIDDSGMGAINRGAANPKGPAPR 296
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 96 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 155
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
+ +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 156 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQV 189
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D K+ VPN+ G++IGK G T++ + SGA +Q+++ + + R V + G
Sbjct: 128 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEP 186
Query: 257 SNIDKAEKLINAVIAE------------ADAGG-----SPS---------LVARGLATAQ 290
+ KA I + E A+ G +P+ L A LA
Sbjct: 187 EQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTAAAGAAGGFLTAEKLA--- 243
Query: 291 ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVR 348
A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP G++ R V
Sbjct: 244 AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP---GTRNRRVT 300
Query: 349 VTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+TG + AQ +I + ++ Q VR S
Sbjct: 301 ITGSPAATQAAQYLISQRVTYEQGVRAS 328
>gi|429892662|gb|AGA18876.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RXXXXXXXX 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXXXKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
>gi|429892658|gb|AGA18874.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQXXXXXXXXXXXX------- 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXXXKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
>gi|429892654|gb|AGA18872.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVXXXXXXX 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXXXKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
>gi|392922650|ref|NP_001256769.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
gi|11065662|emb|CAC14410.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
Length = 413
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+S KI +P+N VG +IGK G+ +R L+ ++ ++Q++++++ P + R + G L+NI
Sbjct: 42 LSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNI 101
Query: 260 DKAEKLINAVIAE--ADAGGSPSL----VARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
+ I I E AD GGS + +RG +++I +PN G++IG+
Sbjct: 102 MAVIESIQDKIREKCADQGGSDAFDHKNTSRG----------AEIKIVMPNTSAGMVIGK 151
Query: 314 GGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGD 352
G IK ++ + G +IQ+ P+ E S ER+V V D
Sbjct: 152 SGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHD 191
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++I +P+ VG IIG+GGE ++ L+ + R+Q+ ++ G+ ERI V G + I
Sbjct: 44 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQM-SKNSETYPGTSERICLVKGRLNNIM 102
Query: 358 IAQEMIKEVLSQTV 371
E I++ + +
Sbjct: 103 AVIESIQDKIREKC 116
>gi|429892660|gb|AGA18875.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQXXXXXXXXXXXX------- 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXXXKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
>gi|429892656|gb|AGA18873.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQXXXXXXXXXXXX------- 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXXTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
>gi|195431208|ref|XP_002063639.1| GK21314 [Drosophila willistoni]
gi|194159724|gb|EDW74625.1| GK21314 [Drosophila willistoni]
Length = 838
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGK-AGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+T +I +P + +G+ + DTI ++Q SGAK+Q+ + + R + + G+
Sbjct: 126 TTCEEQIRLPESVANSFVGRGSNDTITHIQAESGAKVQLMPEQE-------RVIILRGSR 178
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
++ K ++I + G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 179 ESVTKGREMIQQMANRQGGGTVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 238
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++GD ++IE A++M+ ++++Q
Sbjct: 239 TIKQLQEKTGAKMIIIQ------DGPNQEVIKPLRISGDPQKIEHAKQMVLDLIAQ 288
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 28/193 (14%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH-AATRPVEIIGTLSNID 260
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D P+ +P+ I G I+
Sbjct: 220 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDG---PNQEVIKPLRISGDPQKIE 276
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAA---------------------EQVE 299
A++++ +IA+ DA G G A E VE
Sbjct: 277 HAKQMVLDLIAQKDAQAQQQQQGGGGGGGGRPGGANGGGGGGPGLGFNNFNNGNGGESVE 336
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
+ VP VG++IG+GG+ I+ +QT G ++Q I + D +R + G +Q+E A
Sbjct: 337 VFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVEDA 393
Query: 360 QEMIKEVLSQTVR 372
+ I ++ ++
Sbjct: 394 KRTIDGLIENVMQ 406
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT ++
Sbjct: 334 SVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVE 391
Query: 261 KAEKLINAVIAEA----------------------DAGGSPSLVARGLATAQASGAAEQV 298
A++ I+ +I + S G A G E++
Sbjct: 392 DAKRTIDGLIENVMQRNGMGRNGNGGGGGGGGQGGGGDPNNSNYGYGYGVNHAQGGREEI 451
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
VP K G++IGRGGETIK + +SGA ++ + E++ + G Q+E
Sbjct: 452 TFLVPASKCGIVIGRGGETIKLINQQSGAHTEM---DRNATNRPNEKLFKSKGTTDQVEA 508
Query: 359 AQEMIKEVLSQTV 371
A++MI E ++ +
Sbjct: 509 ARQMISEKINMEL 521
>gi|429892664|gb|AGA18877.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A++++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQXXXXXXXXXXXX------- 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXVTKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M+ ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMVLDLIAQ 202
>gi|429892652|gb|AGA18871.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IGK GD IR +Q G K+Q + + D R V I GT +D
Sbjct: 237 STEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKN-DEMGDRRCV-IQGTRQQVD 294
Query: 261 KAEKLINAVIAEA-----------------DAGGSPSLVARGLATAQASGAAEQVEIKVP 303
A++ I+ +I S G A G E++ VP
Sbjct: 295 DAKRTIDGLIENVMQRNGMNRNGNGGGGGPGGDSGNSNYGYGYGVNHAQGGREEITFLVP 354
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGS---KERIVRVTGDMRQIEIAQ 360
K G++IGRGGETIK + +SGA ++ + + S E++ + G Q+E A+
Sbjct: 355 ASKCGIVIGRGGETIKLINQQSGAHTEM------DRNASNPPNEKLFKSKGTTDQVEAAR 408
Query: 361 EMIKEVLSQTV 371
+MI E ++ +
Sbjct: 409 QMISEKINMEL 419
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDK 261
++I +P KVG++IGK GDTI+ LQ +GAK+ I +D +P+ I G I+
Sbjct: 134 QEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP--NQELIKPLRISGEAQKIEH 191
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAA----------EQVEIKVPNEKVGLII 311
A+++ +IA+ DA G G G E E+ VP VG++I
Sbjct: 192 AKQMXLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNGNGGESTEVFVPKIAVGVVI 251
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG+ I+ +QT G ++Q I + D +R + G +Q++ A+ I ++ +
Sbjct: 252 GKGGDMIRKIQTECGCKLQFIQ---GKNDEMGDRRCVIQGTRQQVDDAKRTIDGLIENVM 308
Query: 372 R 372
+
Sbjct: 309 Q 309
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 198 STMSRKIEVPNNKVGVLIGKA-GDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++ +I +P + G +G++ DTI ++Q SG K+Q+ +D D R
Sbjct: 40 TSCEEQIRLPESVAGAFMGRSSNDTITHIQAESGVKVQVMQDQD-------RVXXXXXXX 92
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
K ++I + A G L+ + SG EI +P KVGL+IG+GG+
Sbjct: 93 XXXXKGREMIQNMANRAGGGQVEVLLTINMPPPGPSGYPPYQEIMIPGAKVGLVIGKGGD 152
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIV---RVTGDMRQIEIAQEMIKEVLSQ 369
TIK LQ ++GA++ +I DG + ++ R++G+ ++IE A++M ++++Q
Sbjct: 153 TIKQLQEKTGAKMIIIQ------DGPNQELIKPLRISGEAQKIEHAKQMXLDLIAQ 202
>gi|322707712|gb|EFY99290.1| far upstream element-binding protein 2 [Metarhizium anisopliae
ARSEF 23]
Length = 759
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT+ +A
Sbjct: 501 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGTVEAAARA 558
Query: 263 EKLINAVIAEADAGGSPSLVARGLATA--------QASGAAEQVEIK----VPNEKVGLI 310
+ I ++ G P+ A A+G+A +I VP++ VG+I
Sbjct: 559 KDFILEIVDSDTRGDGPAAKKASAAVVPRSEPPPRDATGSAGPDKINDSVYVPSDAVGMI 618
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
IG+GGETI+ +Q +G +I + G G +R + + G I A+ I E
Sbjct: 619 IGKGGETIRDMQNTTGCKINVAQS---SGPGETQREIALIGTRDSIARAKLAIDE 670
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ ++ ++Q D P R I G
Sbjct: 400 SETIQIESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF---RQCRISGPRPRRA 456
Query: 261 KAEKLINAVIAEADAGG----------SPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
+ + IN +I ++ G P+ +G ATA G + ++I VP+ VGLI
Sbjct: 457 EVKDAINRIIEDSGMGALNRPAQDKNRDPN---KGGATALRDGE-DHMQIMVPDRTVGLI 512
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IGRGGETI+ LQ RSG I ++ + + R V + G + A++ I E++
Sbjct: 513 IGRGGETIRDLQERSGCHINIVGE---SKSVNGLRPVNLIGTVEAAARAKDFILEIVDSD 569
Query: 371 VR 372
R
Sbjct: 570 TR 571
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
D + S P +DS + VP++ VG++IGK G+TIR +Q +G KI + + + P
Sbjct: 594 DATGSAGPDKINDS-----VYVPSDAVGMIIGKGGETIRDMQNTTGCKINVAQ--SSGPG 646
Query: 245 AATRPVEIIGTLSNIDKAEKLIN 267
R + +IGT +I +A+ I+
Sbjct: 647 ETQREIALIGTRDSIARAKLAID 669
>gi|302416471|ref|XP_003006067.1| KH domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261355483|gb|EEY17911.1| KH domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 576
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 20/178 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD------------ADPHAATR-P 249
+I VP+ VG++IG+ G+TIR LQ SG I IT +A P P
Sbjct: 304 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINITSEAKEHQRPFAPSTSLGSPQGRCHGP 363
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE--IKVPNEKV 307
E I L +DK + + A + +++ L A G +++ I VP+E V
Sbjct: 364 KEAI--LEIVDKRQPWVTASRSRPRGALDRTMLEMVLVAAAGGGGHDKINDTIHVPSEAV 421
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
G+IIG+GGETI+ +Q +G +I + P G ER + + G I A+ I+E
Sbjct: 422 GMIIGKGGETIREMQNNTGCKINVAQSSGP---GEVEREIALIGSRESITQAKAAIEE 476
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ SG + R A+ A R +E G +S I++
Sbjct: 221 IQIESSLVGLIIGRQGENLRRIEGESGCRGPRPRRAEVKT-AINRIIEDSG-MSVINRGG 278
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
L + G P A G+ + ++I VP+ VGLIIGRGGETI+ LQ
Sbjct: 279 AL--------KSQGDPR--AGGMGGPAPKEGEDCLQIMVPDRTVGLIIGRGGETIRDLQE 328
Query: 324 RSGARIQL 331
RSG I +
Sbjct: 329 RSGCHINI 336
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 153 KEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVG 212
KE E+ K + V S P + + +++ ++ I VP+ VG
Sbjct: 364 KEAILEIVDKRQPWVTASRS-RPRGALDRTMLEMVLVAAAGGGGHDKINDTIHVPSEAVG 422
Query: 213 VLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI 266
++IGK G+TIR +Q N+G KI + + + P R + +IG+ +I +A+ I
Sbjct: 423 MIIGKGGETIREMQNNTGCKINVAQ--SSGPGEVEREIALIGSRESITQAKAAI 474
>gi|17550876|ref|NP_510825.1| Protein C36E6.1, isoform b [Caenorhabditis elegans]
gi|351059040|emb|CCD66899.1| Protein C36E6.1, isoform b [Caenorhabditis elegans]
Length = 641
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDAD-ADPHAATRPVEIIG 254
D S ++ +I +P NK G +IGK G+ +R L+ + +Q+ +D + AD +P++I G
Sbjct: 153 DPSKITIEIPIPANKCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIAD---TVKPLKITG 209
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+++ L+ ++A D + +++A A S +++KVP VG I+G
Sbjct: 210 DPKQVEQCRLLVADILACNDDTPASAMMAGNGPVATMS-----LQVKVPRCTVGAIMGLQ 264
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
G+ IK L +G +IQ +P P+ ER + + G+ ++ + ++IK ++
Sbjct: 265 GKNIKKLSDETGTKIQFLPDDDPK---LMERSLAIIGNKNKVYVCAQLIKAIV 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 25/170 (14%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+TMS +++VP VG ++G G I+ L +G KIQ D DP R + IIG +
Sbjct: 244 ATMSLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFL--PDDDPKLMERSLAIIGNKN 301
Query: 258 NIDKAEKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ +LI A++ A ++A +P ++ + +P K GL+IGRGGE
Sbjct: 302 KVYVCAQLIKAIVEANSEAANAPVVL---------------FYMVIPASKCGLVIGRGGE 346
Query: 317 TIKGLQTRSGARIQLI--PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
TIK + SGA +L P P E+ + G Q+E A+ +I+
Sbjct: 347 TIKQINQESGAHCELSRDPNTNP-----IEKTFVIRGSEAQVEHAKHLIR 391
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 188 KSDDPSSTDDSTMSRKIEVP--NNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA 245
+ D D + + K+ VP VG++IG+ G ++ + SG ++Q+T +
Sbjct: 41 REDTDHRMDQNGLIVKVAVPVPEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQPSS---T 97
Query: 246 ATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE--------- 296
R VEI G NI++A+ I+ V+ P + + + Q G
Sbjct: 98 GFRLVEIYGIPENIERAKAYISEVVTRGTR--QPGPLCQPVVHVQTHGIKSPVVDQGDPS 155
Query: 297 --QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMR 354
+EI +P K G IIG+GGE ++ L++ + +QL+ Q D K +++TGD +
Sbjct: 156 KITIEIPIPANKCGAIIGKGGEQMRKLRSWTNCNVQLL-QDNNIADTVKP--LKITGDPK 212
Query: 355 QIEIAQEMIKEVLS 368
Q+E + ++ ++L+
Sbjct: 213 QVEQCRLLVADILA 226
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 292 SGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+G +V + VP + VGL+IGR G ++ + +SG R+Q+ Q P G R+V + G
Sbjct: 51 NGLIVKVAVPVPEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQ--PSSTGF--RLVEIYG 106
Query: 352 DMRQIEIAQEMIKEVLSQTVR 372
IE A+ I EV+++ R
Sbjct: 107 IPENIERAKAYISEVVTRGTR 127
>gi|198285561|gb|ACH85319.1| far upstream element (FUSE) binding protein 3 [Salmo salar]
Length = 302
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 186 NSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA 245
+S++D S ST+ + VP VG++IG++G+ I+ +Q +SG +IQ D P
Sbjct: 23 SSRNDFASRLGGSTLD--VAVPRFAVGIIIGRSGEMIKKIQADSGVRIQFKPDDGISPE- 79
Query: 246 ATRPVEIIGTLSNIDKAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQ 297
R +++G A LIN +I A G RG + G ++
Sbjct: 80 --RIAQVMGQPDRCQHAVHLINELIQTAQERDGFGGSGGPRGRGRGRGDWGMGSPGGLQE 137
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
V +P +K GL+IG+GG+TIK + +SGA ++L ++ P RI + G +Q+E
Sbjct: 138 VTYTIPADKCGLVIGKGGDTIKSINQQSGAHVEL-QRNPPHNTDPNVRIFSIRGTPQQME 196
Query: 358 IAQEMIKEVLSQTVRPSTLSGGFN 381
+A+++I + + + S + GF+
Sbjct: 197 LARQLIDDKIGGSGIVSNNNFGFS 220
>gi|440476294|gb|ELQ44906.1| hypothetical protein OOU_Y34scaffold00037g48 [Magnaporthe oryzae
Y34]
gi|440490581|gb|ELQ70125.1| hypothetical protein OOW_P131scaffold00082g18 [Magnaporthe oryzae
P131]
Length = 590
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I + RPV +IG++ +A
Sbjct: 314 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GEQKSVNGLRPVNLIGSMETTTRA 371
Query: 263 EKLINAVIAEADAGGSPSLV--------------ARGLATAQASGAAEQVE--IKVPNEK 306
+ LI ++ ++D + RG G ++ I VP+E
Sbjct: 372 KNLIMEIV-DSDTRNGGAPGGGGGGRPQYGDGPPGRGQRGDHMGGGPDKTNDSIYVPSEA 430
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VG+IIG+GGETI+ +Q+ +G +I + P ER + + G + I A++ I++
Sbjct: 431 VGMIIGKGGETIREMQSSTGCKINVSQSSGPN---ETEREIGLVGSLDAIARAKQAIED 486
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
DD++ +IE + VG++IG+ G+ +R ++ ++ ++Q A D R +I G
Sbjct: 203 DDNSEIMQIEA--SLVGLIIGRGGENLRRIENDTQCRVQFLPAAPTD--GDHRQCKISGP 258
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARGL----------------ATAQASGAAEQVE 299
+A IN +I D+G +P + RG A + E ++
Sbjct: 259 AFRRAEARAAINRIID--DSGMAP--LNRGGGGGGGGGYNAGGRDRNAVIEPKEGEECIQ 314
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I VP+ VGLIIGRGGETI+ LQ RSG I ++ + + R V + G M A
Sbjct: 315 IMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGEQKSV---NGLRPVNLIGSMETTTRA 371
Query: 360 QEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSH 402
+ +I E++ R RP+ GPP G RG H
Sbjct: 372 KNLIMEIVDSDTRNGGAP--GGGGGGRPQYGDGPPGRGQRGDH 412
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 68
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 69 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 128
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 129 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 169
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 283 ARGLATAQ---ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLP 337
A G TA+ A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 248 AGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 307
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 308 ---GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 343
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 267 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 326
Query: 263 EKLIN 267
+ LI+
Sbjct: 327 QYLIS 331
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 68 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 127
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 128 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 281 LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPE 338
L A LA A A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP
Sbjct: 367 LTAEKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP- 422
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
G++ R V +TG + AQ +I + ++ Q VR S
Sbjct: 423 --GTRNRRVTITGSPAATQAAQYLISQRVTYEQGVRAS 458
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 382 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 441
Query: 263 EKLIN 267
+ LI+
Sbjct: 442 QYLIS 446
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT
Sbjct: 66 EDGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 125
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVAR----GLATAQAS---GAAEQVEIKVPNEKVG 308
++ I + E P V + + Q + A+Q ++ VPN G
Sbjct: 126 AEALNAVHNFIAEKVREI-----PQSVVKPESVNILQPQTTMNPDRAKQAKVIVPNSTAG 180
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
LIIG+GG T+K + +SGA +QL PEG +ER+V ++G+ QI A ++I
Sbjct: 181 LIIGKGGATVKAIMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQIHKAVDII 233
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I GT + A
Sbjct: 425 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGTPAATQAA 484
Query: 263 EKLIN 267
+ LI+
Sbjct: 485 QYLIS 489
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 403 SPLVASSFLATEKLVESTKDMVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 462
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 463 FIP---GTRNRKVTITGTPAATQAAQYLISQRVTYEQGVRAT 501
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 180 PQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
P + +S+ ++ +D + K+ +P+ G +IGK G TI LQ +GA I++++
Sbjct: 16 PTEATSTKRSN--TAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSK 73
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGL---ATAQASGAAE 296
D P R + G+ + I + E G + + L +T A A+
Sbjct: 74 DFYPGTTERVCLVQGSAEALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAE-RAK 132
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
Q ++ VPN GLIIG+GG T++ + SGA +QL P G ER+V V+G+ Q+
Sbjct: 133 QAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQL--SQKPAGSNLHERVVTVSGEPSQV 190
Query: 357 EIAQEMI 363
+ A I
Sbjct: 191 QKAIHSI 197
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERI 346
A++ E +E+ VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R
Sbjct: 321 AESVTGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRSRK 377
Query: 347 VRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
V +TG + AQ +I + ++ Q VR S
Sbjct: 378 VTITGPPGATQAAQYLIGQRVAYEQGVRSS 407
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
+ ++ VP VG ++GK G T+ Q +GA+IQI++ + P +R V I G
Sbjct: 329 TLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITG 382
>gi|324500292|gb|ADY40143.1| Far upstream element-binding protein 1 [Ascaris suum]
gi|324519726|gb|ADY47462.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 363
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 21/152 (13%)
Query: 213 VLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
++IGK G+TI+ L SGAKIQ D D R I GT I KA + I+ ++ +
Sbjct: 1 MIIGKGGETIKRLAAESGAKIQFKPDEDQT--TPDRCAVIQGTTEQIAKATQFISELVNK 58
Query: 273 ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
+ AG AE + VP K GL+IG+GGETIK + SGA ++L
Sbjct: 59 SGAGS----------------GAEIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELS 102
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
P S E++ + G QI AQ +I+
Sbjct: 103 RDPPPN---SSEKVFIIKGTPYQIHHAQHIIR 131
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP NK G++IGK G+TI+ + SGA ++++R D P+++ + I GT I A+
Sbjct: 70 MHVPANKTGLVIGKGGETIKQICAESGAHVELSR--DPPPNSSEKVFIIKGTPYQIHHAQ 127
Query: 264 KLINAVIAEADAG 276
+I + + G
Sbjct: 128 HIIRIKVGDISPG 140
>gi|156717598|ref|NP_001096339.1| neuro-oncological ventral antigen 1 [Xenopus (Silurana) tropicalis]
gi|134023955|gb|AAI35782.1| LOC100124925 protein [Xenopus (Silurana) tropicalis]
Length = 508
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 28/194 (14%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 46 EDGQFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 105
Query: 256 LSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGLATA----------- 289
+ ++ I I E +P + + L++
Sbjct: 106 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLSSLPPATKSSPSDP 165
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V
Sbjct: 166 MTISRASQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPDGINLQERVVTV 223
Query: 350 TGDMRQIEIAQEMI 363
+G+ Q A E+I
Sbjct: 224 SGEPEQNRKAVELI 237
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 417 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 476
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 477 GTPAATQAAQYLI 489
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 420 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 476
Query: 351 GDMRQIEIAQEMIKE 365
G + AQ +I +
Sbjct: 477 GTPAATQAAQYLITQ 491
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 43 RFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKA 102
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+LI L+A G +A A +V + VPN G IIG+GG TIK
Sbjct: 103 MELI-----------LEKLLAEGEEFNEAE-ARPKVRLVVPNNSCGGIIGKGGATIKSFI 150
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSGGFN 381
S A I++ PQ G +R+V VTG A ++I + LS+ V P+ LS F
Sbjct: 151 EESHAGIKISPQD-NNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPF- 208
Query: 382 QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG 430
P P S+P P+ Y PQ PY + + P+ YG
Sbjct: 209 -----PYAGLTFP------SYPGVPVGYMIPQV-PYNNAVNYGPNNGYG 245
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A E + I + +E +G ++GR G I + SGARI++ + GD G+ +R V +T
Sbjct: 265 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDFISGTSDRKVTIT 320
Query: 351 GDMRQIEIAQEMIKEVLSQT 370
G I A+ MI + +S +
Sbjct: 321 GTSEAIRTAESMIMQRVSAS 340
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 43 RFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKA 102
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+LI L+A G +A A +V + VPN G IIG+GG TIK
Sbjct: 103 MELI-----------LEKLLAEGEEFNEAE-ARPKVRLVVPNSSCGGIIGKGGATIKSFI 150
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSGGFN 381
S A I++ PQ G +R+V VTG A ++I + LS+ V P+ LS F
Sbjct: 151 EESHAGIKISPQD-NNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSSPF- 208
Query: 382 QQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG 430
P P S+P P+ Y PQ PY + + P+ YG
Sbjct: 209 -----PYAGLTFP------SYPGVPVGYMIPQV-PYNNAVNYGPNNGYG 245
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A E + I + +E +G ++GR G I + SGARI++ + GD G+ +R V +T
Sbjct: 265 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDFISGTSDRKVTIT 320
Query: 351 GDMRQIEIAQEMIKEVLSQT 370
G I A+ MI + +S +
Sbjct: 321 GTSEAIRTAESMIMQRVSAS 340
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 103
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 104 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 163
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 164 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 204
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTG 351
A E VEI VP VG I+G+GG+T+ Q +GARIQ+ + LP G++ R V +TG
Sbjct: 285 AKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP---GTRNRRVTITG 341
Query: 352 DMRQIEIAQEMIKEVLS--QTVRPS 374
+ AQ +I + ++ Q VR S
Sbjct: 342 SPAATQAAQYLISQRVTYEQGVRAS 366
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI 252
S TD + +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 280 SGTDLAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTI 339
Query: 253 IGTLSNIDKAEKLIN 267
G+ + A+ LI+
Sbjct: 340 TGSPAATQAAQYLIS 354
>gi|384254002|gb|EIE27476.1| hypothetical protein COCSUDRAFT_64249 [Coccomyxa subellipsoidea
C-169]
Length = 632
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 25/166 (15%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-TLSNIDKA 262
I++P VG LIGK G+TI+ LQYN+ ++QI D + V I G + + A
Sbjct: 251 IDIPAPMVGKLIGKGGETIKQLQYNTNTRVQI----DHQTPGEAKKVSIQGDSHEAVQAA 306
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
++ + +++ D+G A GA++ VE P VG IIGRGGETI+ LQ
Sbjct: 307 KQQVEQIVSMDDSG--------------AGGASQSVE--CPQGIVGRIIGRGGETIRALQ 350
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
S A I ++ Q+ PEG+ R V ++G +E A +M+ E++S
Sbjct: 351 QASQAHI-VVDQNYPEGE---PRRVNISGRPDAVERAVKMVSELIS 392
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 12/141 (8%)
Query: 194 STDDSTM---SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
S DDS S+ +E P VG +IG+ G+TIR LQ S A I + ++ P R V
Sbjct: 315 SMDDSGAGGASQSVECPQGIVGRIIGRGGETIRALQQASQAHIVVDQNY---PEGEPRRV 371
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
I G +++A K+++ +I+ + G + S++ + GA E++ P VG +
Sbjct: 372 NISGRPDAVERAVKMVSELIS-GEPGSAQSIIQK-----VHYGAGVTREVQCPKGMVGRV 425
Query: 311 IGRGGETIKGLQTRSGARIQL 331
IG+GGETIK LQ GA IQ+
Sbjct: 426 IGKGGETIKALQKNFGANIQI 446
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ-IEI 358
I +P VG +IG+GGETIK LQ + R+Q+ H G+ K V + GD + ++
Sbjct: 251 IDIPAPMVGKLIGKGGETIKQLQYNTNTRVQI--DHQTPGEAKK---VSIQGDSHEAVQA 305
Query: 359 AQEMIKEVLSQ 369
A++ +++++S
Sbjct: 306 AKQQVEQIVSM 316
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 44 RFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMKA 103
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+LI L+A G +A A +V + VPN G IIG+GG TIK
Sbjct: 104 MELI-----------LEKLLAEGEEFNEAE-ARPKVRLVVPNSSCGGIIGKGGATIKSFI 151
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
S A I++ PQ G +R+V +TG A ++I + LS+ V
Sbjct: 152 EESHAGIKISPQD-NNYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDVH---------- 200
Query: 383 QAYRPRVPTGPPQWGPRG-SHPSQPMAYDYPQRGPYPSQNPHYPHLPYG 430
Y P + + P G S+P P+ Y PQ PY + + P+ YG
Sbjct: 201 --YPPNLSSPFPYAGLTFPSYPGVPVGYMIPQV-PYSNAVNYGPNNGYG 246
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A E + I + +E +G ++GR G I + SGARI++ + GD G+ +R V +T
Sbjct: 266 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDYISGTSDRKVTIT 321
Query: 351 GDMRQIEIAQEMIKEVLS 368
G I A+ MI + +S
Sbjct: 322 GTPEAIRTAESMIMQRVS 339
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ VG LIGK G+T+R L+ SG ++Q++++ + P R + G ++++ K
Sbjct: 5 KVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKV 64
Query: 263 EKLINAVIAEADAGGSPSLVA--RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+I I E +PS + +G+ ++++ VPN G++IG+ G IK
Sbjct: 65 SDVILEKIREKVDNNTPSDIFDHKGMER------KNEMKLVVPNTSAGMVIGKSGARIKE 118
Query: 321 LQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
++ ++GA IQ+ P+ E S+ERI+ + + Q E+ + ++ VL +
Sbjct: 119 IREQTGANIQVYPKAGSQEAKVSQERIITIAAE--QDEVLMDALQRVLEKV 167
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV++ +P+ VG +IG+GGET++ L++ SG R+Q+ ++ G+ ERI V G + +
Sbjct: 3 QVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQM-SKNQEVYPGTNERICLVKGKIASV 61
Query: 357 EIAQEMIKEVLSQTVRPSTLSGGFNQQ 383
++I E + + V +T S F+ +
Sbjct: 62 LKVSDVILEKIREKVDNNTPSDIFDHK 88
>gi|256017197|ref|NP_067336.1| RNA-binding protein Nova-1 [Mus musculus]
gi|122065708|sp|Q9JKN6.2|NOVA1_MOUSE RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|148704854|gb|EDL36801.1| mCG140771, isoform CRA_b [Mus musculus]
gi|149051188|gb|EDM03361.1| neuro-oncological ventral antigen 1, isoform CRA_b [Rattus
norvegicus]
Length = 507
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 112
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I I E +P + + L ++ + A
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 172
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 230
Query: 357 EIAQEMI 363
A E+I
Sbjct: 231 RKAVELI 237
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 475
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 476 GTPAATQAAQYLI 488
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 475
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 476 GTPAATQAAQYLITQRITYEQGVR 499
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 131 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 190
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 191 GATVKAIMEQSGAWVQLSQKPD 212
>gi|322700491|gb|EFY92246.1| far upstream element-binding protein 2 [Metarhizium acridum CQMa
102]
Length = 548
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT+ +A
Sbjct: 290 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGTVEAAARA 347
Query: 263 EKLINAVIAEADAGGSPSLVARGLATA--------QASGAAEQVEIK----VPNEKVGLI 310
+ I ++ G P+ A A+G+A +I VP++ VG+I
Sbjct: 348 KDFILEIVDSDTRGDGPAAKKASAAVVPRSEPPPRDATGSAGPDKINDSVYVPSDAVGMI 407
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
IG+GGETI+ +Q +G +I + P G +R + + G I A+ I E
Sbjct: 408 IGKGGETIRDMQNTTGCKINVAQSSGP---GETQREIALIGTRDSIARAKLAIDE 459
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ ++ ++Q D P R I G
Sbjct: 189 SETIQIESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF---RQCRISGPRPRRA 245
Query: 261 KAEKLINAVIAEADAGG----------SPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
+ + IN +I ++ G P+ +G ATA G + ++I VP+ VGLI
Sbjct: 246 EVKDAINRIIEDSGMGALNRPAQDKNRDPN---KGGATALRDGE-DHMQIMVPDRTVGLI 301
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IGRGGETI+ LQ RSG I ++ + + R V + G + A++ I E++
Sbjct: 302 IGRGGETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGTVEAAARAKDFILEIVDSD 358
Query: 371 VR 372
R
Sbjct: 359 TR 360
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
D + S P +DS + VP++ VG++IGK G+TIR +Q +G KI + + + P
Sbjct: 383 DATGSAGPDKINDS-----VYVPSDAVGMIIGKGGETIRDMQNTTGCKINVAQ--SSGPG 435
Query: 245 AATRPVEIIGTLSNIDKAEKLIN 267
R + +IGT +I +A+ I+
Sbjct: 436 ETQREIALIGTRDSIARAKLAID 458
>gi|346320774|gb|EGX90374.1| far upstream element-binding protein 2 [Cordyceps militaris CM01]
Length = 687
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ S ++Q D P R I G
Sbjct: 300 SETIQIESSLVGLIIGRNGENLRRIESESSCRVQFLSPTDGGPF---RQCRITGPAPRRS 356
Query: 261 KAEKLINAVIAEADAGGSPSL----VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+ + IN +I ++ G +G AT G + ++I VP+ VGLIIGRGGE
Sbjct: 357 EVKDAINRIIEDSGMGALNRAEEKPTVQGAATVLRDGE-DHMQIMVPDRTVGLIIGRGGE 415
Query: 317 TIKGLQTRSGARIQLI 332
TI+ LQ RSG I ++
Sbjct: 416 TIRDLQERSGCHINIV 431
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 28/186 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ + RPV +IGT +A
Sbjct: 398 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVHESKS--VNGLRPVNLIGTPVATARA 455
Query: 263 EKLINAVI---AEADAGGSPSLVARGLATAQASGAAEQVE-------------------- 299
+ I ++ + ADA G P + + G +
Sbjct: 456 KDFILEIVDSDSRADAQGGPPGGPKPPPMPRGGGGGGGGQSRDHNQHSNPYDGPGKVTDA 515
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I VP++ VG+IIG+GGETI+ +Q+++ +I + G G +R + + G IE A
Sbjct: 516 IYVPSDAVGMIIGKGGETIREIQSQAECKINVAQS---SGPGEVQREISLVGAPASIERA 572
Query: 360 QEMIKE 365
+++I E
Sbjct: 573 KQLIDE 578
>gi|302901749|ref|XP_003048502.1| hypothetical protein NECHADRAFT_2566 [Nectria haematococca mpVI
77-13-4]
gi|256729435|gb|EEU42789.1| hypothetical protein NECHADRAFT_2566 [Nectria haematococca mpVI
77-13-4]
Length = 544
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ S ++Q D P R +I G
Sbjct: 188 SETIQIESSLVGLIIGRQGENLRRIEAESNCRVQFLTSTDGGPF---RQCKISGPRHRRA 244
Query: 261 KAEKLINAVIAEADAGG-----SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+ ++ IN +I ++ G P +G A A G + ++I VP+ VGLIIGRGG
Sbjct: 245 EVKEAINRIIDDSGMGALNRPDKPRDPNKGGAAALREGE-DHMQIMVPDRTVGLIIGRGG 303
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
ETI+ LQ RSG I ++ + + R V + G A++ I E++ R
Sbjct: 304 ETIRDLQERSGCHINIVGESKSV---NGLRPVNLIGTREAAARAKDFIMEIVDSDSR 357
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 26/182 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT +A
Sbjct: 287 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGTREAAARA 344
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQ-----------------ASGAAEQVE--IKVP 303
+ I ++ G +P+ A+ + +G +++ I VP
Sbjct: 345 KDFIMEIVDSDSRGDAPA--AKRMGGGGGGGGGGARHDGPPRDMGGAGGPDKINDSIYVP 402
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
++ VG+IIG+GGETI+ +Q +G +I + P G +R + + G I A++ I
Sbjct: 403 SDAVGMIIGKGGETIREMQNSTGCKINVAQSTNP---GETQREIALIGTRDSIARAKQAI 459
Query: 364 KE 365
E
Sbjct: 460 DE 461
>gi|7025507|gb|AAF35907.1|AF232828_1 ventral neuron-specific protein 1 NOVA1 [Mus musculus]
Length = 493
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 39 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 98
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I I E +P + + L ++ + A
Sbjct: 99 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 158
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 159 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 216
Query: 357 EIAQEMI 363
A E+I
Sbjct: 217 RKAVELI 223
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 402 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 461
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 462 GTPAATQAAQYLI 474
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 405 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 461
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 462 GTPAATQAAQYLITQRITYEQGVR 485
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 117 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 176
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 177 GATVKAIMEQSGAWVQLSQKPD 198
>gi|326920695|ref|XP_003206604.1| PREDICTED: RNA-binding protein Nova-1-like [Meleagris gallopavo]
Length = 520
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 125
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I I E +P + + L ++ + A
Sbjct: 126 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 185
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 186 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 243
Query: 357 EIAQEMI 363
A E+I
Sbjct: 244 RKAVELI 250
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 429 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 488
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 489 GTPAATQAAQYLI 501
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 432 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 488
Query: 351 GDMRQIEIAQEMIKEVLS 368
G + AQ +I + ++
Sbjct: 489 GTPAATQAAQYLITQRIT 506
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 144 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 203
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 204 GATVKAIMEQSGAWVQLSQKPD 225
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 95/215 (44%), Gaps = 32/215 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 14 RFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKA 73
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE---QVEIKVPNEKVGLIIGRGGETIK 319
+LI + + LA + S AE +V + VPN G IIG+GG TIK
Sbjct: 74 MELI---------------LEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIK 118
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSG 378
S A I++ PQ G +R+V VTG + A +I LS+ V P LS
Sbjct: 119 SFIEDSHAGIKISPQD-NNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSS 177
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQ 413
F P G P S+P P+ Y PQ
Sbjct: 178 PF------PYAGLGFP------SYPGVPVGYMIPQ 200
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A + + I + +E +G ++GR G I + SGARI++ + GD G+ ER V +T
Sbjct: 235 AQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDFIAGTSERKVTIT 290
Query: 351 GDMRQIEIAQEMIKE 365
G I+ A+ MI +
Sbjct: 291 GTSEAIQAAESMIMQ 305
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
+ +D+ S I + + +G ++G+AG I + SGA+I+I+ D + R V I
Sbjct: 231 ANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTIT 290
Query: 254 GTLSNIDKAEKLI 266
GT I AE +I
Sbjct: 291 GTSEAIQAAESMI 303
>gi|300120395|emb|CBK19949.2| unnamed protein product [Blastocystis hominis]
Length = 438
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 161 VKEEETVK-EEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMS-RKIEVPNNKVGVLIGKA 218
V + T++ + +E + V Q +V+ K D + S K+ VPN+KVG++IG+
Sbjct: 64 VMRDVTIRGHRDMIEKTKEVIQTLVETRKGDIITRLQSSRDGFEKVAVPNDKVGLVIGRD 123
Query: 219 GDTIRYLQYNSGAKIQITRDAD-ADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGG 277
G I+ L + +IQ+ RD D DP R + I G N+ +A+K I +I + G
Sbjct: 124 GCVIKELMSKTSTQIQVPRDPDKKDP--TKRYIIITGDPKNVLEAKKHIQDII-DGQMGS 180
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
P V I VP++KVGL+IG+ G IK +Q++S A IQ IP
Sbjct: 181 IPPDVPV-------------CTITVPDDKVGLVIGKKGTIIKDIQSKSHAYIQ-IPGKPV 226
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
EG R++ + G Q ++A+ I+ ++ TV T
Sbjct: 227 EGIYPPVRVINIGGTEEQQQLAKAEIQRMIGTTVGTGT 264
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 94/164 (57%), Gaps = 11/164 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I+VP VG++IGK G+ R+LQ ++I ++ + +A R V I G I+K +
Sbjct: 22 IQVPFAIVGLIIGKNGENRRHLQDIFNVNLRIQQENEVSGNAVMRDVTIRGHRDMIEKTK 81
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
++I ++ E G ++ R Q+S + ++ VPN+KVGL+IGR G IK L +
Sbjct: 82 EVIQTLV-ETRKG---DIITR----LQSSRDGFE-KVAVPNDKVGLVIGRDGCVIKELMS 132
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
++ +IQ +P+ + D +K I+ +TGD + + A++ I++++
Sbjct: 133 KTSTQIQ-VPRDPDKKDPTKRYII-ITGDPKNVLEAKKHIQDII 174
>gi|355693195|gb|EHH27798.1| hypothetical protein EGK_18083, partial [Macaca mulatta]
Length = 488
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%)
Query: 186 NSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA 245
N + P +D K+ +P+ G +IGK G TI LQ +GA I++++ D P
Sbjct: 17 NMMAAAPIQQEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT 76
Query: 246 ATRPVEIIGTLSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGL---- 286
R I GT+ ++ I I E +P + + L
Sbjct: 77 TERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSP 136
Query: 287 ATAQAS-------GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEG 339
T ++S A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G
Sbjct: 137 TTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDG 194
Query: 340 DGSKERIVRVTGDMRQIEIAQEMI 363
+ER+V V+G+ Q A E+I
Sbjct: 195 INLQERVVTVSGEPEQNRKAVELI 218
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 397 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 456
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 457 GTPAATQAAQYLI 469
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 400 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 456
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 457 GTPAATQAAQYLITQRITYEQGVR 480
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 112 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 171
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 172 GATVKAIMEQSGAWVQLSQKPD 193
>gi|442618214|ref|NP_001262415.1| pasilla, isoform R [Drosophila melanogaster]
gi|440217247|gb|AGB95797.1| pasilla, isoform R [Drosophila melanogaster]
Length = 780
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 271 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 330
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + T Q +QV+I VPN G+IIG+G
Sbjct: 331 EAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKG 385
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 386 GAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 437
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 687 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 742
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 743 TITGQPSAIAKAQYLIEQKINE 764
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 350 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 405
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 406 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 438
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
DST KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 63 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I I I E P L + + + Q +QV+I VPN G+IIG+G
Sbjct: 123 EGIMTVLDFIMDKIRE-----KPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKG 177
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 178 GAFIKQIKEESGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 229
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G I+ ++ SG+ +QI++ D R + IIG N A
Sbjct: 162 KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPK-DVSLQERCITIIGDKENNKNA 220
Query: 263 EKLINAVIAE 272
K+I + I E
Sbjct: 221 CKMILSKIVE 230
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S+ +EVP +G ++G G ++ +Q+ SGA +QI++ P R V I G S I
Sbjct: 491 SKCVEVPEVIIGAVLGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGHPSAIA 550
Query: 261 KAEKLINAVIAE 272
KA+ LI I E
Sbjct: 551 KAQCLIEQKINE 562
>gi|348558003|ref|XP_003464808.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Cavia porcellus]
Length = 507
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I I E +P + + L ++ + A
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 172
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 230
Query: 357 EIAQEMI 363
A E+I
Sbjct: 231 RKAVELI 237
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 475
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 476 GTPAATQAAQYLI 488
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 475
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 476 GTPAATQAAQYLITQRITYEQGVR 499
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 131 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 190
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 191 GATVKAIMEQSGAWVQLSQKPD 212
>gi|314122254|ref|NP_001186641.1| RNA-binding protein Nova-1 isoform 1 [Gallus gallus]
gi|387763164|ref|NP_001248729.1| RNA-binding protein Nova-1 [Macaca mulatta]
gi|57090475|ref|XP_547754.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Canis lupus
familiaris]
gi|114652475|ref|XP_001170675.1| PREDICTED: RNA-binding protein Nova-1 isoform 3 [Pan troglodytes]
gi|224051378|ref|XP_002200539.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Taeniopygia
guttata]
gi|291403671|ref|XP_002718160.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 1
[Oryctolagus cuniculus]
gi|296214716|ref|XP_002753741.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Callithrix
jacchus]
gi|297694849|ref|XP_002824680.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pongo abelii]
gi|332223197|ref|XP_003260754.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Nomascus
leucogenys]
gi|344273491|ref|XP_003408555.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Loxodonta
africana]
gi|395838270|ref|XP_003792040.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Otolemur
garnettii]
gi|402875871|ref|XP_003901717.1| PREDICTED: RNA-binding protein Nova-1-like [Papio anubis]
gi|410962020|ref|XP_003987575.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Felis catus]
gi|426376604|ref|XP_004055087.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Gorilla
gorilla gorilla]
gi|355778493|gb|EHH63529.1| hypothetical protein EGM_16516 [Macaca fascicularis]
gi|380813130|gb|AFE78439.1| RNA-binding protein Nova-1 isoform 1 [Macaca mulatta]
gi|410293724|gb|JAA25462.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353659|gb|JAA43433.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 507
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I I E +P + + L ++ + A
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 172
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 230
Query: 357 EIAQEMI 363
A E+I
Sbjct: 231 RKAVELI 237
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 475
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 476 GTPAATQAAQYLI 488
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 475
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 476 GTPAATQAAQYLITQRITYEQGVR 499
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 131 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 190
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 191 GATVKAIMEQSGAWVQLSQKPD 212
>gi|397475477|ref|XP_003809165.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pan paniscus]
Length = 470
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S +D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I
Sbjct: 7 SREDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 66
Query: 254 GTLSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGL----ATAQAS-- 292
GT+ ++ I I E +P + + L T ++S
Sbjct: 67 GTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPS 126
Query: 293 -----GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIV 347
A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V
Sbjct: 127 DPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVV 184
Query: 348 RVTGDMRQIEIAQEMI 363
V+G+ Q A E+I
Sbjct: 185 TVSGEPEQNRKAVELI 200
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 379 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 438
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 439 GTPAATQAAQYLI 451
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 382 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 438
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 439 GTPAATQAAQYLITQRITYEQGVR 462
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 94 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 153
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 154 GATVKAIMEQSGAWVQLSQKPD 175
>gi|226504964|ref|NP_001141009.1| uncharacterized protein LOC100273088 [Zea mays]
gi|194702154|gb|ACF85161.1| unknown [Zea mays]
Length = 221
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 43 RFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFGEVMKA 102
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE---QVEIKVPNEKVGLIIGRGGETIK 319
+LI L+A L + AE +V + VPN G IIG+GG TIK
Sbjct: 103 MELI-----------LEKLLAELLYQGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIK 151
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSG 378
S A I++ PQ G +R+V VTG A ++I + LS+ V P+ LS
Sbjct: 152 SFIEESHAGIKISPQD-NNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSS 210
Query: 379 GF 380
F
Sbjct: 211 PF 212
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 125
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + L T +Q ++ VPN GLIIG+GG T+K
Sbjct: 126 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNSTAGLIIGKGGATVKA 185
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL P+G +ER+V ++G + + +EI + I+E
Sbjct: 186 VMEQSGAWVQL--SQKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQE 232
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGR 313
TL ++ A N ++ A SP + + LAT + A GA + VEI VP VG I+G+
Sbjct: 379 TLGSLAAATGATNGYLSAA----SPLVASSLLATEKLAEGAKDVVEIAVPENLVGAILGK 434
Query: 314 GGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTG 351
GG+T+ Q +GARIQ+ + +P G++ R V +TG
Sbjct: 435 GGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTITG 471
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+
Sbjct: 420 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGS 472
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 119
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E + P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 120 HDFIAEKVREMPQSTQKTEPVSILQPQTTVNPD-RVKQAKLIVPNSTAGLIIGKGGATVK 178
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL PEG +ER+V ++G + + +EI + I+E
Sbjct: 179 AVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQE 226
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA E VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 392 SPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 451
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 452 FIP---GTRNRKVTITGSQAATQAAQYLISQRITYEQGVRAT 490
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 414 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAA 473
Query: 263 EKLIN 267
+ LI+
Sbjct: 474 QYLIS 478
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 81 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 140
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + L T +Q ++ VPN GLIIG+GG T+K
Sbjct: 141 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKA 200
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL P+G +ER+V ++G + + +EI + I+E
Sbjct: 201 VMEQSGAWVQL--SQKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQE 247
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGR 313
TL ++ A N ++ A SP + + LAT + A GA + VEI VP VG I+G+
Sbjct: 394 TLGSLAAATGATNGYLSAA----SPLVASSLLATEKLAEGAKDVVEIAVPENLVGAILGK 449
Query: 314 GGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--Q 369
GG+T+ Q +GARIQ+ + +P G++ R V +TG + AQ +I + ++ Q
Sbjct: 450 GGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTITGSPAATQAAQYLISQRITYEQ 506
Query: 370 TVRPS 374
VR +
Sbjct: 507 GVRAT 511
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 435 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQAA 494
Query: 263 EKLIN 267
+ LI+
Sbjct: 495 QYLIS 499
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 119
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E + P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 120 HNFIAEKVREMPQSSQKTEPVSILQPQTTVNPD-RIKQAKLIVPNSTAGLIIGKGGATVK 178
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL PEG +ER+V V+G + + +EI + I+E
Sbjct: 179 AVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQNRKAVEIIVQKIQE 226
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 281 LVARGLATAQ--ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHL 336
LVA L + A G E VEI VP VG I+G+GG+T+ Q +GARIQ+ + +
Sbjct: 393 LVASSLLGTEKLAEGGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI 452
Query: 337 PEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 453 P---GTRNRKVTITGSPAATQAAQYLISQRITYEQGVRAT 489
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 413 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAA 472
Query: 263 EKLIN 267
+ LI+
Sbjct: 473 QYLIS 477
>gi|301768703|ref|XP_002919770.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Ailuropoda
melanoleuca]
Length = 517
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 28/195 (14%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
++D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I G
Sbjct: 55 SEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 114
Query: 255 TLSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGLATA---------- 289
T+ ++ I I E +P + + L ++
Sbjct: 115 TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSD 174
Query: 290 -QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVR 348
+ A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V
Sbjct: 175 PMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVT 232
Query: 349 VTGDMRQIEIAQEMI 363
V+G+ Q A E+I
Sbjct: 233 VSGEPEQNRKAVELI 247
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 426 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 485
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 486 GTPAATQAAQYLI 498
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 429 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 485
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 486 GTPAATQAAQYLITQRITYEQGVR 509
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 141 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 200
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 201 GATVKAIMEQSGAWVQLSQKPD 222
>gi|158256368|dbj|BAF84157.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I I E +P + + L ++ + A
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 172
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 230
Query: 357 EIAQEMI 363
A E+I
Sbjct: 231 RKAVELI 237
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 475
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 476 GTPAATQAAQYLI 488
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 475
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 476 GTPAATQAAQYLITQRITYEQGVR 499
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 131 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 190
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 191 GATVKAVMEQSGAWVQLSQKPD 212
>gi|171677065|ref|XP_001903484.1| hypothetical protein [Podospora anserina S mat+]
gi|170936600|emb|CAP61259.1| unnamed protein product [Podospora anserina S mat+]
Length = 474
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IGT + A+
Sbjct: 277 IMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--SENKSVNGLRPVNLIGTPAATKNAK 334
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIK----VPNEKVGLIIGRGGETIK 319
+LI ++ + AR G Q +I VP++ VG+IIG+GGETI+
Sbjct: 335 ELILEIVDSDSRNTATGGNARAPRNDGGYGGGGQDKINDSIYVPSDAVGMIIGKGGETIR 394
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
+Q +G +I + G G ER + + G IE A+ I+E + V
Sbjct: 395 EMQNTTGCKINV---SQSSGSGETEREIGLVGSRDSIERAKVAIREKVEAAV 443
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 25/194 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQ-ITRDADADPHAATRPVEIIGTLSNIDKA 262
++V + VG++IG+ G+ +R ++ S ++Q I + +A+P+ R I G + ++A
Sbjct: 166 MQVEKSLVGLIIGRQGENLRRVESESRCRVQFINAENEAEPYRVCR---ITGARAQREEA 222
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE-----------------QVEIKVPNE 305
+ +IN +IA++ P G G + + I VP+
Sbjct: 223 KAMINRIIADSGMRSGPPAGGGGGHLGGDRGGRDAPRPDRNAPPIPKEGEDTLVIMVPDR 282
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VGLIIGRGGETI+ LQ RSG I ++ ++ + R V + G + A+E+I E
Sbjct: 283 TVGLIIGRGGETIRDLQERSGCHINIVSEN---KSVNGLRPVNLIGTPAATKNAKELILE 339
Query: 366 VLSQTVRPSTLSGG 379
++ R +T +GG
Sbjct: 340 IVDSDSR-NTATGG 352
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 68 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSV 127
Query: 263 EKLINAVIAEADAGG---SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 128 HNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD-RVKQAKLIVPNSTAGLIIGKGGATVK 186
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL PEG +ER+V ++G + + +EI + I+E
Sbjct: 187 AVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQE 234
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 399 SPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 458
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 459 FIP---GTRNRKVTITGSPAATQAAQYLISQRITYEQGVRAT 497
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 421 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAA 480
Query: 263 EKLIN 267
+ LI+
Sbjct: 481 QYLIS 485
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 43 RFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMKA 102
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+LI L+A G +A A +V + VPN G IIG+GG TIK
Sbjct: 103 MELI-----------LEKLLAEGEEFNEAE-ARPKVRLVVPNSSCGGIIGKGGATIKSFI 150
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSGGF 380
S A I++ PQ G +R+V VTG A ++I + LS+ V P LS F
Sbjct: 151 EESHAGIKISPQD-NNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPNLSSPF 208
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A E + I + +E +G ++GR G I + SGARI++ + GD G+ +R V +T
Sbjct: 265 AQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDFISGTSDRKVTIT 320
Query: 351 GDMRQIEIAQEMIKEVLS 368
G I A+ MI + +S
Sbjct: 321 GTSEAIRTAESMIMQRVS 338
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 119
Query: 263 EKLINAVIAE---ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E + P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 120 HNFIAEKVREMPQSTQKTEPVSILQPQTTVNPD-RVKQAKLIVPNSTAGLIIGKGGATVK 178
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL PEG +ER+V ++G + + +EI + I+E
Sbjct: 179 AVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQE 226
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA E VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 392 SPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 451
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 452 FIP---GTRNRKVTITGSQAATQAAQYLISQRITYEQGVRAT 490
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 414 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAA 473
Query: 263 EKLIN 267
+ LI+
Sbjct: 474 QYLIS 478
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 68 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 127
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
+ +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 128 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQV 161
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 29/200 (14%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D K+ VPN+ G++IGK G T++ + SGA +Q+++ + + R V + G
Sbjct: 100 DRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEP 158
Query: 257 SNIDKAEKLINAVIAE------------ADAGG-----SPS-LVARGLATAQASGAAEQV 298
+ KA I + E A+ G +P+ L A LA A A E V
Sbjct: 159 EQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGLTAEKLA---AESAKELV 215
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTGDMRQI 356
EI VP VG I+G+GG+T+ Q +GARIQ+ + LP G++ R V +TG
Sbjct: 216 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP---GTRNRRVTITGSPAAT 272
Query: 357 EIAQEMIKEVLS--QTVRPS 374
+ AQ +I + ++ Q VR S
Sbjct: 273 QAAQYLISQRVTYEQGVRAS 292
>gi|118137282|pdb|2ANN|A Chain A, Crystal Structure (I) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25 NT RNA Hairpin
Length = 178
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 68
Query: 263 EKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I I E A P + + T A QV+I VPN GLIIG+GG T+K
Sbjct: 69 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD-RANQVKIIVPNSTAGLIIGKGGATVK 127
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL P+G + R+V V+G+ Q A E+I
Sbjct: 128 AIMEQSGAWVQL--SQKPDGINLQNRVVTVSGEPEQNRKAVELI 169
>gi|56549653|ref|NP_002506.2| RNA-binding protein Nova-1 isoform 1 [Homo sapiens]
gi|50959950|gb|AAH75039.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|50960205|gb|AAH75038.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|119586397|gb|EAW65993.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|119586399|gb|EAW65995.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|158255480|dbj|BAF83711.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I I E +P + + L ++ + A
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 172
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 230
Query: 357 EIAQEMI 363
A E+I
Sbjct: 231 RKAVELI 237
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 416 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 475
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 476 GTPAATQAAQYLI 488
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 419 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 475
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 476 GTPAATQAAQYLITQRITYEQGVR 499
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 131 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 190
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 191 GATVKAVMEQSGAWVQLSQKPD 212
>gi|444728868|gb|ELW69310.1| RNA-binding protein Nova-1 [Tupaia chinensis]
Length = 482
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 20 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 79
Query: 256 LSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGLATA----------- 289
+ ++ I I E +P + + L ++
Sbjct: 80 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 139
Query: 290 QASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
+ A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V
Sbjct: 140 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTV 197
Query: 350 TGDMRQIEIAQEMI 363
+G+ Q A E+I
Sbjct: 198 SGEPEQNRKAVELI 211
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 391 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 450
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 451 GTPAATQAAQYLI 463
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 394 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 450
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 451 GTPAATQAAQYLITQRITYEQGVR 474
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 125
Query: 263 EKLINAVIAEADAGG---SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E P + + T +Q +I VPN GLIIG+GG T+K
Sbjct: 126 HNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD-RVKQAKIIVPNSTAGLIIGKGGATVK 184
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL PEG +ER+V ++G + + +EI + I+E
Sbjct: 185 AVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQE 232
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 397 SPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 456
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 457 FIP---GTRNRKVTITGSPAATQAAQYLISQRITYEQGVRAT 495
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 419 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAA 478
Query: 263 EKLIN 267
+ LI+
Sbjct: 479 QYLIS 483
>gi|268562247|ref|XP_002638547.1| Hypothetical protein CBG05583 [Caenorhabditis briggsae]
Length = 399
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 17/160 (10%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+S KI +P++ VG +IGK G+ +R L+ ++ ++Q++++++ P + R + G L+NI
Sbjct: 41 LSIKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQMSKNSETYPGTSERICLVKGRLNNI 100
Query: 260 DKAEKLINAVIAE--ADAGGSPSL----VARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
+ I I E AD GS + +RG +++I +PN G++IG+
Sbjct: 101 MSVIESIQDKIREKCADQAGSDAFDHKNTSRG----------NEIKIVMPNTSAGMVIGK 150
Query: 314 GGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGD 352
G IK ++ + G +IQ+ P+ E S ER+V V D
Sbjct: 151 SGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHD 190
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++I +P+ VG IIG+GGE ++ L+T + R+Q+ ++ G+ ERI V G + I
Sbjct: 43 IKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQM-SKNSETYPGTSERICLVKGRLNNIM 101
Query: 358 IAQEMIKEVLSQTVRPSTLSGGFNQQ 383
E I++ + + S F+ +
Sbjct: 102 SVIESIQDKIREKCADQAGSDAFDHK 127
>gi|118137284|pdb|2ANR|A Chain A, Crystal Structure (Ii) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25NT RNA Hairpin
Length = 178
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAV 68
Query: 263 EKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I I E A P + + T A QV+I VPN GLIIG+GG T+K
Sbjct: 69 HGFIAEKIREXPQNVAKTEPVSILQPQTTVNPD-RANQVKIIVPNSTAGLIIGKGGATVK 127
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ +SGA +QL P+G + R+V V+G+ Q A E+I
Sbjct: 128 AIXEQSGAWVQL--SQKPDGINLQNRVVTVSGEPEQNRKAVELI 169
>gi|430814707|emb|CCJ28098.1| unnamed protein product [Pneumocystis jirovecii]
Length = 360
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 37/182 (20%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI--TRDADADPHAATRPVEIIGTLSNIDK 261
+++ N VG++IG+ G+++++++ +GA++Q R + + AT I GT + +D
Sbjct: 164 VKIETNFVGLIIGRGGESLKHIEQETGARVQFYPERTSIMNQRMAT----ISGTQAQVDT 219
Query: 262 AEKLINAVIAEADAGGSPSLVARGLATAQASGAAE-----------QVEIKVPNEKVGLI 310
A+K I +VI E + +GLA++ + + ++I +PN+ VG+I
Sbjct: 220 AKKRIFSVIEENK-------ILKGLASSMKNNIEDINKSAQENGYSSIQIYIPNKAVGMI 272
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI--VR---VTGDMRQIEIAQEMIKE 365
IGRGGE+I+ LQ RS I + ++ E I +R + G I+IA+ MI E
Sbjct: 273 IGRGGESIRDLQERSKTYINIAHEN--------ETIHGMRPAYIFGTSESIQIAKNMIDE 324
Query: 366 VL 367
++
Sbjct: 325 II 326
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
+K+ VGLIIGRGGE++K ++ +GAR+Q P+ + +R+ ++G Q++ A
Sbjct: 164 VKIETNFVGLIIGRGGESLKHIEQETGARVQFYPERTSIMN---QRMATISGTQAQVDTA 220
Query: 360 QEMIKEVLSQ 369
++ I V+ +
Sbjct: 221 KKRIFSVIEE 230
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I +PN VG++IG+ G++IR LQ S I I + + H RP I GT +I
Sbjct: 259 SIQIYIPNKAVGMIIGRGGESIRDLQERSKTYINIAHENET-IHGM-RPAYIFGTSESIQ 316
Query: 261 KAEKLINAVI 270
A+ +I+ +I
Sbjct: 317 IAKNMIDEII 326
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 119
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + L T +Q ++ VPN GLIIG+GG T+K
Sbjct: 120 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKA 179
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL P+G +ER+V ++G + + +EI + I+E
Sbjct: 180 VMEQSGAWVQL--SQKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQE 226
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGR 313
TL ++ A N ++ A SP + + LAT + A GA + VEI VP VG I+G+
Sbjct: 373 TLGSLAAATGATNGYLSAA----SPLVASSLLATEKLAEGAKDVVEIAVPENLVGAILGK 428
Query: 314 GGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--Q 369
GG+T+ Q +GARIQ+ + +P G++ R V +TG + AQ +I + ++ Q
Sbjct: 429 GGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTITGSPAATQAAQYLISQRITYEQ 485
Query: 370 TVRPS 374
VR +
Sbjct: 486 GVRAT 490
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 414 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQAA 473
Query: 263 EKLIN 267
+ LI+
Sbjct: 474 QYLIS 478
>gi|397475479|ref|XP_003809166.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pan paniscus]
Length = 466
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S +D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I
Sbjct: 3 SEEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ 62
Query: 254 GTLSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGL----ATAQAS-- 292
GT+ ++ I I E +P + + L T ++S
Sbjct: 63 GTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPS 122
Query: 293 -----GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIV 347
A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V
Sbjct: 123 DPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVV 180
Query: 348 RVTGDMRQIEIAQEMI 363
V+G+ Q A E+I
Sbjct: 181 TVSGEPEQNRKAVELI 196
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 375 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 434
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 435 GTPAATQAAQYLI 447
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 378 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 434
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 435 GTPAATQAAQYLITQRITYEQGVR 458
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 90 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 149
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 150 GATVKAIMEQSGAWVQLSQKPD 171
>gi|406859724|gb|EKD12787.1| KH domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 646
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 22/185 (11%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+
Sbjct: 302 DGEDSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GEQKSVNGLRPVNLIGSR 359
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLV--ARGLATAQASGAAEQVE--------------I 300
+A+ +I ++ G+ V AR A I
Sbjct: 360 EAAARAKDMIMEIVESDSKSGNKEQVPPARAAGGRDAGYGGGGYNGASGGGGGDSSNDSI 419
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
VP+E VG+IIG+GGETIK +Q+ +G +I + P+ G +R + + G I A+
Sbjct: 420 FVPSEAVGMIIGKGGETIKEIQSTTGCKINVSPKQ----PGETDREIGLVGSRDAIAAAK 475
Query: 361 EMIKE 365
I+E
Sbjct: 476 RAIEE 480
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I + +N VG++IG+ G+ +R ++ +G ++Q D + R +I G+ N KA+
Sbjct: 205 INIESNLVGLIIGRQGENLRRVETETGCRVQFI--TGQDENGPYRECKITGSKVNRAKAK 262
Query: 264 KLINAVIAEADAGGSPSLVA---------RGLATAQASGAAE-QVEIKVPNEKVGLIIGR 313
IN +I ++ + A RG + A E ++I VP+ VGLIIGR
Sbjct: 263 AEINRIIDDSGMATNARAAAERARDAPPIRGSSHQPALRDGEDSMQIMVPDRTVGLIIGR 322
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GGETI+ LQ RSG + ++ + + + R V + G A++MI E++
Sbjct: 323 GGETIRDLQERSGCHVNIVGE---QKSVNGLRPVNLIGSREAAARAKDMIMEIV 373
>gi|400598823|gb|EJP66530.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 539
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I++ ++ VG++IG+ G+ +R ++ S ++Q AD P R I G
Sbjct: 162 SETIQIESSLVGLIIGRNGENLRRIEGESNCRVQFLSPADGGPF---RQCRITGPAPRRA 218
Query: 261 KAEKLINAVIAEADAGG---SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ + IN +I ++ G + ++G A G + ++I VP+ VGLIIGRGGET
Sbjct: 219 EVKDAINRIIEDSGMGALNRAEEKSSQGAAGGLRDGE-DHMQIMVPDRTVGLIIGRGGET 277
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
I+ LQ RSG I ++ + + R V + G A+E I E++ R
Sbjct: 278 IRDLQERSGCHINIVHESKSV---NGLRPVNLIGTPTATARAKESILEIVDSDSR 329
>gi|354471632|ref|XP_003498045.1| PREDICTED: RNA-binding protein Nova-1 [Cricetulus griseus]
Length = 493
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 39 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 98
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGL----ATAQAS-------GAAE 296
I I E +P + + L T ++S A
Sbjct: 99 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRAN 158
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+ Q
Sbjct: 159 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTVSGEPEQN 216
Query: 357 EIAQEMI 363
A E+I
Sbjct: 217 RKAVELI 223
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 402 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 461
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 462 GTPAATQAAQYLI 474
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 405 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 461
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 462 GTPAATQAAQYLITQRITYEQGVR 485
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 117 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 176
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 177 GATVKAIMEQSGAWVQLSQKPD 198
>gi|161078118|ref|NP_001036691.1| pasilla, isoform I [Drosophila melanogaster]
gi|113194762|gb|ABI31151.1| pasilla, isoform I [Drosophila melanogaster]
Length = 519
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 74 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 133
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + T Q +QV+I VPN G+IIG+G
Sbjct: 134 EAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKG 188
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 189 GAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 240
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 153 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 208
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 209 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 241
>gi|327259393|ref|XP_003214522.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 508
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 28/194 (14%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 47 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 106
Query: 256 LSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGL----ATAQAS---- 292
+ ++ I I E +P + + L T ++S
Sbjct: 107 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 166
Query: 293 ---GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V
Sbjct: 167 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTV 224
Query: 350 TGDMRQIEIAQEMI 363
+G+ Q A E+I
Sbjct: 225 SGEPEQNRKAVELI 238
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 417 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 476
Query: 254 GTLSNIDKAEKLIN 267
GT + A+ LI
Sbjct: 477 GTPAATQAAQYLIT 490
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 420 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 476
Query: 351 GDMRQIEIAQEMIKEVLS 368
G + AQ +I + ++
Sbjct: 477 GTPAATQAAQYLITQRIT 494
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 132 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 191
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 192 GATVKAIMEQSGAWVQLSQKPD 213
>gi|355707685|gb|AES03033.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 171
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 68 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 127
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
+ +SGA +QL PEG +ER+V V+G+ Q+
Sbjct: 128 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQV 161
>gi|76157738|gb|AAX28573.2| SJCHGC01935 protein [Schistosoma japonicum]
Length = 263
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 105/191 (54%), Gaps = 26/191 (13%)
Query: 192 PSSTDDS----TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
P+S ++S ++ + +P+ VG++IGK G+ I LQ ++ K+QI+ A T
Sbjct: 86 PTSNNNSAGPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQIS-------QAGT 138
Query: 248 --RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNE 305
R V + GT ID A+++I +I A G+P+ T ++G+ +E+ VP
Sbjct: 139 PERTVTLTGTPQQIDHAKQMIGDIIERAGKNGTPTT-----TTYNSTGSITTIEMMVPGL 193
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQH---LPEGDGSKERIVRVTGDMRQIEIAQEM 362
K GL+IG+ GETIK LQ +G ++ LI Q PE ++ +R++G+ ++E A++
Sbjct: 194 KAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE-----DKPLRISGEPSRVEKARQA 248
Query: 363 IKEVLSQTVRP 373
+ +++ RP
Sbjct: 249 VLVLINSRDRP 259
>gi|145354100|ref|XP_001421332.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581569|gb|ABO99625.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 310
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
DPSS + M PN G +IG G+ I +Q SGA ++I + P R +
Sbjct: 2 DPSSVTEYVMC-----PNESAGKVIGHGGEKINSIQTESGAIVKIQNQNEVGP-GQPRRI 55
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNE--KVG 308
I G + A +L+ A+I ++ A S A+ A A EI VP E + G
Sbjct: 56 TISGAPERVAHASQLVYAIIGQSSA----SRAAQAPRGAGGGRDAAGAEIFVPVEPDQFG 111
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
IIGRGGETI+ LQ SG R+Q+ D R V++TGD E+A+ +++EVL
Sbjct: 112 KIIGRGGETIRRLQEESGVRMQV--------DRPNSR-VQITGDASGCEVARTLLQEVLD 162
Query: 369 QTVRPSTL 376
T P +
Sbjct: 163 ATNEPVGM 170
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 29/165 (17%)
Query: 209 NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINA 268
++ G +IG+ G+TIR LQ SG ++Q+ R P++ V+I G S + A L+
Sbjct: 108 DQFGKIIGRGGETIRRLQEESGVRMQVDR-----PNSR---VQITGDASGCEVARTLLQE 159
Query: 269 VIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
V+ DA P V G + AQ++ EI ++ G IIG+GGE I+ L ++GA+
Sbjct: 160 VL---DATNEP--VGMGTSGAQST------EISAQGQE-GRIIGKGGENIRSLAAQTGAK 207
Query: 329 IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
+ +I + +VR+ GD RQIE A + E + V P
Sbjct: 208 LSIIKE---------TGMVRIQGDPRQIEDAVRAVNEFIDAQVNP 243
>gi|51092069|gb|AAT94448.1| RE39088p [Drosophila melanogaster]
Length = 563
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 118 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 177
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + T Q +QV+I VPN G+IIG+G
Sbjct: 178 EAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKG 232
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 233 GAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 284
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 145 TEEAFIDVKEETKEVTVKEEETV-KEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRK 203
T E + T+ + V E + K E + +N ++VD D T + K
Sbjct: 166 TTERVCLITGSTEAIMVVMEFIMDKIREKPDLTN----KIVDT----DSKQTQERDKQVK 217
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VPN+ G++IGK G I+ ++ SG+ +QI++ D R + IIG N A
Sbjct: 218 ILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKP-TDVSLQERCITIIGDKENNKNAC 276
Query: 264 KLINAVIAE 272
K+I + I E
Sbjct: 277 KMILSKIVE 285
>gi|395503649|ref|XP_003756176.1| PREDICTED: RNA-binding protein Nova-1-like [Sarcophilus harrisii]
Length = 488
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 28/194 (14%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+D K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT
Sbjct: 27 EDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 86
Query: 256 LSNIDKAEKLINAVIAEA---------------DAGGSPSLVARGL----ATAQAS---- 292
+ ++ I I E +P + + L T ++S
Sbjct: 87 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 146
Query: 293 ---GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRV 349
A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V
Sbjct: 147 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL--SQKPDGINLQERVVTV 204
Query: 350 TGDMRQIEIAQEMI 363
+G+ Q A E+I
Sbjct: 205 SGEPEQNRKAVELI 218
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 397 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 456
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 457 GTPAATQAAQYLI 469
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 400 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 456
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 457 GTPAATQAAQYLITQRITYEQGVR 480
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 112 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 171
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 172 GATVKAIMEQSGAWVQLSQKPD 193
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 68 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 127
Query: 263 EKLINAVIAEADAGG---SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 128 HNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD-RVKQAKLIVPNSTAGLIIGKGGATVK 186
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL PEG +ER+V ++G + + +EI + I+E
Sbjct: 187 AVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQE 234
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 399 SPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 458
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 459 FIP---GTRNRKVTITGSPAATQAAQYLISQRITYEQGVRAT 497
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 421 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAA 480
Query: 263 EKLIN 267
+ LI+
Sbjct: 481 QYLIS 485
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSV 68
Query: 263 EKLINAVIAEADAGG---SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIK 319
I + E P + + T +Q ++ VPN GLIIG+GG T+K
Sbjct: 69 HNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD-RVKQAKLIVPNSTAGLIIGKGGATVK 127
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQEMIKE 365
+ +SGA +QL PEG +ER+V ++G + + +EI + I+E
Sbjct: 128 AVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQE 175
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 340 SPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 399
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 400 FIP---GTRNRKVTITGSPAATQAAQYLISQRITYEQGVRAT 438
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 362 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAA 421
Query: 263 EKLIN 267
+ LI+
Sbjct: 422 QYLIS 426
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
++ + T KI VP G +IGK G+TI LQ +GA++++++ D P R I
Sbjct: 32 ASGNGTFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLIT 91
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSL-VARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
G++ + + + I I E P+ +A Q + +QV+I VPN G+IIG
Sbjct: 92 GSVEGVLRIHEFIMEKIKEKP---DPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIG 148
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+GG IK ++ SGA +Q+ + ER + V G+M + A ++I
Sbjct: 149 KGGSYIKQIKEESGAYVQI--SQKSKDHALAERCITVIGEMDNNKKACQLI 197
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 192 PSSTDDST--MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
PS+ D + + R +EV N VG ++G G ++ +Q SGA IQI++ P R
Sbjct: 441 PSAADKCSDAVKRDLEVGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGTFAPGTRNRI 500
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADA 275
V I GT + + A+ LI IAE +A
Sbjct: 501 VSITGTPNAVSTAQYLIEQQIAEEEA 526
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 103
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 104 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 163
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI---------EIAQEMIKEVLSQTV 371
+ +SGA +QL PEG +ER+V V+G+ Q+ ++A E KE++ V
Sbjct: 164 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKLAAESAKELVEIAV 221
Query: 372 RPSTLSGGF 380
P L G
Sbjct: 222 -PENLVGAI 229
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 20/129 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ VPN+ G++IGK G T++ + SGA +Q+++ + + R V + G + KA
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG-INLQERVVTVSGEPEQVHKA 200
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
S + + LA A A E VEI VP VG I+G+GG+T+ Q
Sbjct: 201 ----------------VSAIVQKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQ 241
Query: 323 TRSGARIQL 331
+GARIQ+
Sbjct: 242 ELTGARIQI 250
>gi|12654955|gb|AAH01325.1| Unknown (protein for IMAGE:3456579), partial [Homo sapiens]
Length = 372
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 11 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 67
Query: 261 KAEKLINAVIAEAD--------AGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
A +I+ +I A A RG + A G +++ VP +K GL+IG
Sbjct: 68 HAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 127
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
+GGE IK + +SGA ++L P D + R + G +QIE+A+++I E + T
Sbjct: 128 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT-IRGVPQQIEVARQLIDEKVGGT 184
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 52 RFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVVKA 111
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE---QVEIKVPNEKVGLIIGRGGETIK 319
+L+ + + L+ + S AE + + VPN G IIG+GG TIK
Sbjct: 112 MELV---------------LEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGGATIK 156
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSG 378
S A I++ PQ G +R+V +TG + A +I LS+ V P LS
Sbjct: 157 SFIEDSHAGIKISPQD-NNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPNLSS 215
Query: 379 GF 380
F
Sbjct: 216 PF 217
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A E I V +E +G ++GR G I + SGARI++ + GD G+ +R V +T
Sbjct: 282 AQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDFIAGTSDRKVTIT 337
Query: 351 GDMRQIEIAQEMIKEVLSQT 370
G I+ A+ MI + ++ +
Sbjct: 338 GSSEAIQAAEAMIMQRVTAS 357
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
+ +D+ S I V + +G ++G+AG I + SGA+I+I+ D + R V I
Sbjct: 278 ANNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTIT 337
Query: 254 GTLSNIDKAEKLI 266
G+ I AE +I
Sbjct: 338 GSSEAIQAAEAMI 350
>gi|348537889|ref|XP_003456425.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oreochromis
niloticus]
Length = 496
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 32/193 (16%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ ++
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 95
Query: 263 EKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASGAAE 296
I + E +P V + L TA + S A
Sbjct: 96 HDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQTLPTACHTTPKEDANPEKSRRAN 155
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----D 352
++ VPN GLIIG+GG T+K + +SGA +QL PEG +ER+V ++G +
Sbjct: 156 SAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQN 213
Query: 353 MRQIEIAQEMIKE 365
+ +EI + I+E
Sbjct: 214 RKAVEIIVQKIQE 226
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA E VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 392 SPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 451
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 452 FIP---GTRNRKVTITGSQAATQAAQYLISQRITYEQGVRAT 490
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 414 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAA 473
Query: 263 EKLIN 267
+ LI+
Sbjct: 474 QYLIS 478
>gi|444517768|gb|ELV11782.1| Far upstream element-binding protein 3 [Tupaia chinensis]
Length = 463
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 144 STEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDN---SKSDDPSSTDDSTM 200
ST + + + V K ET+K+ + E + V + D + +D P
Sbjct: 99 STVQELLIPASKVGLVIGKGGETIKQLQ--ERTGVKMVMIQDGPLPTGADKPLRITGDPF 156
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
++ VP VG++IG+ G+ I+ +Q ++G +IQ D P R +++G
Sbjct: 157 KVQVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPE---RAAQVMGPPDRCQ 213
Query: 261 KAEKLINAVIA---EADAGGSPSLVARGLATAQAS------------GAAEQVEIKVPNE 305
A +I+ +I E D G GLA A+ G +++ VP +
Sbjct: 214 HAAHVISELILTAQERDGFG-------GLAVARGRGRGRGDWSVGTPGGFQEITYTVPAD 266
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
K GL+IG+GGE IK + +SGA ++L P D RI + G +QIE+A+ +I E
Sbjct: 267 KCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD-PGLRIFTIRGIPQQIEVARHLIDE 325
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 48/189 (25%)
Query: 182 QVVDNSKSD--DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA 239
Q+VD ++ + D ++ +++ +P +KVG++IGK G+TI+ LQ +G K+ + +D
Sbjct: 80 QIVDRCRNGPGFHNDMDGNSTVQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDG 139
Query: 240 DADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE 299
P A +P+ I +G +V+
Sbjct: 140 PL-PTGADKPLRI---------------------------------------TGDPFKVQ 159
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDG-SKERIVRVTGDMRQIEI 358
+ VP VG++IGR GE IK +Q +G RIQ P DG S ER +V G + +
Sbjct: 160 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGISPERAAQVMGPPDRCQH 214
Query: 359 AQEMIKEVL 367
A +I E++
Sbjct: 215 AAHVISELI 223
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
+G L + +A++L+ ++ G G +T Q E+ +P KVGL+IG
Sbjct: 65 LGALVHQRQAKRLLGQIVDRCRNGPGFHNDMDGNSTVQ--------ELLIPASKVGLVIG 116
Query: 313 RGGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIEIAQ----------- 360
+GGETIK LQ R+G ++ +I LP G ++ +R+TGD +++++
Sbjct: 117 KGGETIKQLQERTGVKMVMIQDGPLPTG---ADKPLRITGDPFKVQVSVPRFAVGIVIGR 173
Query: 361 --EMIKEV 366
EMIK++
Sbjct: 174 NGEMIKKI 181
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +P+ G +IGK G TI LQ +GA I++++ D P R + GT ++
Sbjct: 29 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 88
Query: 263 EKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
I + E + V L T A+Q ++ VPN GLIIG+GG T+K
Sbjct: 89 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 148
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+ +SGA +QL PEG +ER+V V+G+ Q+ A I + L+
Sbjct: 149 VMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKLA 194
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 25/152 (16%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ VPN+ G++IGK G T++ + SGA +Q+++ + + R V + G + KA
Sbjct: 127 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGI-NLQERVVTVSGEPEQVHKA 185
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
S + + LA A A E VEI VP VG I+G+GG+T+ Q
Sbjct: 186 ----------------VSAIVQKLA---AESAKELVEIAVPENLVGAILGKGGKTLVEYQ 226
Query: 323 TRSGARIQLIP--QHLPEGDGSKERIVRVTGD 352
+GARIQ+ + LP G++ R V +TG
Sbjct: 227 ELTGARIQISKKGEFLP---GTRNRRVTITGS 255
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A+
Sbjct: 204 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 263
Query: 264 KLIN 267
LI+
Sbjct: 264 YLIS 267
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D+T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 63 DTTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR--GLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + + Q QV+I VPN G+IIG+G
Sbjct: 123 EAIMVVMEFIMDKIRE-----KPDLTNKIVDVESKQTQERDRQVKILVPNSTAGMIIGKG 177
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 178 GAFIKQIKEESGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 229
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G G ++ +Q+ SGA +QI++ P R V
Sbjct: 479 DLSSKD----SKNVEVPEVIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 534
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 535 TITGQPSAIAKAQYLIEQKINE 556
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G I+ ++ SG+ +QI++ D R + IIG N A
Sbjct: 162 KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPK-DVSLQERCITIIGDKENNKNA 220
Query: 263 EKLINAVIAE 272
K+I + I E
Sbjct: 221 CKMILSKIVE 230
>gi|361126278|gb|EHK98287.1| putative Far upstream element-binding protein 2 [Glarea lozoyensis
74030]
Length = 499
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
M +++ +N VG++IG+ G+ +R ++ +G ++Q D R +I G +
Sbjct: 181 MVESLQIESNLVGLIIGRQGENLRRVESETGCRVQFI--TGHDEQGPFRQCKITGPRARR 238
Query: 260 DKAEKLINAVIAEADAGGSPSLV----------ARGLATAQASG-------AAEQVEIKV 302
A+ IN +I ++ G+PS V +R +A S + ++I V
Sbjct: 239 ADAKAEINRIIDDSGMAGNPSNVGGARIGGDRNSREPPSANRSSHQPALRDGEDSMQIMV 298
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEM 362
P+ VGLIIGRGGETI+ LQ RSG + ++ + + R V + G A+++
Sbjct: 299 PDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSV---NGLRPVNLIGSREAAAHAKDL 355
Query: 363 IKEVL 367
I E++
Sbjct: 356 IMEIV 360
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 175 PSNVVPQQVVDNSKSDDPSSTDDSTM---------SRKIEVPNNKVGVLIGKAGDTIRYL 225
PSNV ++ + S +P S + S+ S +I VP+ VG++IG+ G+TIR L
Sbjct: 258 PSNVGGARIGGDRNSREPPSANRSSHQPALRDGEDSMQIMVPDRTVGLIIGRGGETIRDL 317
Query: 226 QYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARG 285
Q SG + I + RPV +IG+ A+ LI ++ G+ A G
Sbjct: 318 QERSGCHVNIV--GEQKSVNGLRPVNLIGSREAAAHAKDLIMEIVESDSKTGAAKEAAPG 375
Query: 286 L-----------ATAQASGAAEQVEIKV--PNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
G A+++ KV P+E VG+IIG+ GETIK +Q +G +I +
Sbjct: 376 RRDPPRDQNQAGYAGGGGGGADKINDKVYVPSEAVGMIIGKRGETIKEMQNTTGCKINVT 435
Query: 333 P 333
P
Sbjct: 436 P 436
>gi|451856005|gb|EMD69296.1| hypothetical protein COCSADRAFT_78008 [Cochliobolus sativus ND90Pr]
Length = 574
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P + D+S + I + ++ VG++IG+ G+++R ++ S +IQ ++ P R
Sbjct: 203 PPANDNSEV---ILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGPQ---RECR 256
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----------VEIK 301
I G+ S A++ IN +I E GG+P+ A A +Q +I
Sbjct: 257 ITGSPSARISAKREINRIIEEN--GGNPARETGRNARPAAKTVGQQQPALREGEQSSQIM 314
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP+ VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G A+E
Sbjct: 315 VPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEN---KSVNGLRPVNLIGSPAAAAHAKE 371
Query: 362 MIKEVLSQTVRPSTLSGGFNQQ 383
+I E++ + + G NQQ
Sbjct: 372 LIMEIVDSDTK--QMEGTGNQQ 391
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+ +
Sbjct: 310 SSQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GENKSVNGLRPVNLIGSPAAAA 367
Query: 261 KAEKLINAVI----AEADAGGS-------PSLVAR------GLATAQASGAAEQVEIKVP 303
A++LI ++ + + G+ P R A I VP
Sbjct: 368 HAKELIMEIVDSDTKQMEGTGNQQPPSQQPFNTRRDNFDPYAAGAGGAGAGKINDSIHVP 427
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEM 362
++ VG+IIG+GGETIK +Q+ +G +I ++ + G+ ER + + G + I+ A+
Sbjct: 428 SDAVGMIIGKGGETIKSMQSETGCKI-----NVSQASGADIEREIGLVGTRQAIDDAKRA 482
Query: 363 IKEVLSQT 370
I E + Q
Sbjct: 483 IWEKVDQV 490
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S+ ++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I
Sbjct: 38 SSGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLIT 97
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLII 311
G+ I + I I E P L + + T Q +QV+I VPN G+II
Sbjct: 98 GSTEAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMII 152
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 153 GKGGAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 207
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 457 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 512
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 513 TITGQPSAIAKAQYLIEQKINE 534
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 120 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 175
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 176 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 208
>gi|326430280|gb|EGD75850.1| hypothetical protein PTSG_07967 [Salpingoeca sp. ATCC 50818]
Length = 510
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
DPS+ T+++ +P++ VG +IG+ G TIR +Q SGA + I + + P R V
Sbjct: 223 DPSAPATETITKIAYIPDDHVGRVIGRQGSTIRQIQELSGAHMDIAK--ECRPGEYQREV 280
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
+ GT + ++K E+LI ++ +P+ +A I +P+E VG I
Sbjct: 281 TVTGTPAQVEKCEELIRKKVSGESLPPAPTR------------SANDTIITIPDEMVGRI 328
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IG+GG TI+ LQ SGA + + P G+ +R + V G +QI +I +++
Sbjct: 329 IGKGGCTIRELQDNSGAHMDVAKAPNP---GTNKREIVVRGQPQQIAYCTYLINTKIAE- 384
Query: 371 VRPSTLSGGFNQQAYR--PRVPTGPPQWG 397
L+G + + P V T G
Sbjct: 385 -----LTGDYTRNFVEGPPEVLTAAANMG 408
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ V +++VG LIG+ G IR ++ SG ++ + A+ +P + R + + G+ ++ +
Sbjct: 153 VNVADHQVGRLIGREGSNIRQMEALSGCQVNVP--AECEPGTSVRKITLRGSPESVRYCK 210
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+++ I E GG PS A T A +P++ VG +IGR G TI+ +Q
Sbjct: 211 QMLEQKIRE--DGGDPSAPATETITKIAY---------IPDDHVGRVIGRQGSTIRQIQE 259
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
SGA + + + P G +R V VTG Q+E +E+I++ +S
Sbjct: 260 LSGAHMDIAKECRP---GEYQREVTVTGTPAQVEKCEELIRKKVS 301
>gi|326430279|gb|EGD75849.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 455
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
DPS+ T+++ +P++ VG +IG+ G TIR +Q SGA + I + + P R V
Sbjct: 223 DPSAPATETITKIAYIPDDHVGRVIGRQGSTIRQIQELSGAHMDIAK--ECRPGEYQREV 280
Query: 251 EIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
+ GT + ++K E+LI ++ +P+ +A I +P+E VG I
Sbjct: 281 TVTGTPAQVEKCEELIRKKVSGESLPPAPTR------------SANDTIITIPDEMVGRI 328
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IG+GG TI+ LQ SGA + + P G+ +R + V G +QI +I +++
Sbjct: 329 IGKGGCTIRELQDNSGAHMDVAKAPNP---GTNKREIVVRGQPQQIAYCTYLINTKIAE- 384
Query: 371 VRPSTLSGGFNQQAYR--PRVPTGPPQWG 397
L+G + + P V T G
Sbjct: 385 -----LTGDYTRNFVEGPPEVLTAAANMG 408
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ V +++VG LIG+ G IR ++ SG ++ + A+ +P + R + + G+ ++ +
Sbjct: 153 VNVADHQVGRLIGREGSNIRQMEALSGCQVNVP--AECEPGTSVRKITLRGSPESVRYCK 210
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+++ I E GG PS A T A +P++ VG +IGR G TI+ +Q
Sbjct: 211 QMLEQKIRE--DGGDPSAPATETITKIAY---------IPDDHVGRVIGRQGSTIRQIQE 259
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
SGA + + + P G +R V VTG Q+E +E+I++ +S
Sbjct: 260 LSGAHMDIAKECRP---GEYQREVTVTGTPAQVEKCEELIRKKVS 301
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R + P R + + G + KA
Sbjct: 49 RFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKA 108
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+L+ L+A G +A A + + VPN G IIG+GG TIK
Sbjct: 109 MELV-----------LEKLLAEGEEFNEAE-ARPKFRLVVPNSSCGGIIGKGGATIKAFI 156
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR-PSTLSGGF 380
S A I++ PQ G +R+V +TG A +I LS+ V P LS F
Sbjct: 157 EDSHAGIKISPQD-NNFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDVHYPPNLSSPF 214
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
+T+D+ S I V + +G ++G+AG I + SGA+I+I+ D + R V I
Sbjct: 267 ATNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTIT 326
Query: 254 GTLSNIDKAEKLI 266
GT I AE +I
Sbjct: 327 GTPEAIQAAESMI 339
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVT 350
A E I V +E +G ++GR G I + SGARI++ + GD G+ +R V +T
Sbjct: 271 AQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKISDR----GDFIAGTSDRKVTIT 326
Query: 351 GDMRQIEIAQEMIKEVLSQT 370
G I+ A+ MI + +S +
Sbjct: 327 GTPEAIQAAESMIMQRVSAS 346
>gi|25012554|gb|AAN71378.1| RE36563p, partial [Drosophila melanogaster]
Length = 605
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S ++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I
Sbjct: 93 SFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLIT 152
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLII 311
G+ I + I I E P L + + T Q +QV+I VPN G+II
Sbjct: 153 GSTEAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMII 207
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 208 GKGGAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 262
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 512 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 567
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 568 TITGQPSAIAKAQYLIEQKINE 589
>gi|24645370|ref|NP_731356.1| pasilla, isoform C [Drosophila melanogaster]
gi|11526808|gb|AAG36790.1|AF220423_1 PASILLA splice variant 4 [Drosophila melanogaster]
gi|23170800|gb|AAF54378.2| pasilla, isoform C [Drosophila melanogaster]
Length = 561
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S ++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I
Sbjct: 49 SFCETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLIT 108
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLII 311
G+ I + I I E P L + + T Q +QV+I VPN G+II
Sbjct: 109 GSTEAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMII 163
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 164 GKGGAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 218
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 468 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 523
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 524 TITGQPSAIAKAQYLIEQKINE 545
>gi|407929115|gb|EKG21954.1| K-like protein [Macrophomina phaseolina MS6]
Length = 315
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+
Sbjct: 47 DGENSVQIMVPDRTVGLIIGRQGETIRDLQERSGCHVNIV--GENKSVNGLRPVNLIGSR 104
Query: 257 SNIDKAEKLINAVIAEADA--GGSPSLVARGLATAQASGAAEQVE-IKVPNEKVGLIIGR 313
+A++LI ++ E+D G P+ AT SG + + I VP+E VG+IIG+
Sbjct: 105 EAAARAKELIMEIV-ESDTRPSGPPAKDHNRGATFDPSGPGKINDTIVVPSEAVGMIIGK 163
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
GGETIK +Q +G +I ++ + G+ ER + + G + IE A+ I + + TVR
Sbjct: 164 GGETIKEMQNSTGCKI-----NVSQASGADIEREIGLVGTRQAIEDAKRAIWDKVD-TVR 217
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
V+I VP+ VGLIIGR GETI+ LQ RSG + ++ ++ + R V + G
Sbjct: 52 VQIMVPDRTVGLIIGRQGETIRDLQERSGCHVNIVGENKSV---NGLRPVNLIGSREAAA 108
Query: 358 IAQEMIKEVLSQTVRPS 374
A+E+I E++ RPS
Sbjct: 109 RAKELIMEIVESDTRPS 125
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 212 GVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIA 271
G +IGK G TI LQ +GA I++++ D P R + GT ++ I +
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Query: 272 EADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARI 329
E + V L T A+Q ++ VPN GLIIG+GG T+K + +SGA +
Sbjct: 61 EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWV 120
Query: 330 QLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
QL PEG +ER+V V+G+ Q+ A I
Sbjct: 121 QL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 152
>gi|429857659|gb|ELA32513.1| kh domain-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 543
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 20/178 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I ++ RPV +IG+ + +A
Sbjct: 270 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GESKSVNGLRPVNLIGSQESAAQA 327
Query: 263 EKLINAVI-AEADAGGSPSLVARG----------LATAQASGAAEQVEIK----VPNEKV 307
+ LI ++ +++ G P+ A+ A QA G + + VP+E V
Sbjct: 328 KDLIMEIVDSDSRNDGQPAAPAKKPPRQDGGHQRDAGPQAGGPDKIHDAXXXXYVPSEAV 387
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
G+IIG+GGETI+ +Q +G +I + G G +R + + G I A++ I+E
Sbjct: 388 GMIIGKGGETIRDMQNGTGCKINVAQS---SGPGEVQREIALIGSRDSIARAKQAIEE 442
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I++ ++ VG++IG+ G+ +R ++ S ++Q +D P R +I G +
Sbjct: 179 IQIESSLVGLIIGRQGENLRRIESESSCRVQFLPSSDNGPF---RQCKITGPRARRTAWG 235
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
A+ + + + A A A G + ++I VP+ VGLIIGRGGETI+ LQ
Sbjct: 236 PSTAALRTRRELLATTAAAAAAGAAALRDGE-DCMQIMVPDRTVGLIIGRGGETIRDLQE 294
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
RSG I ++ + + R V + G A+++I E++ R
Sbjct: 295 RSGCHINIVGE---SKSVNGLRPVNLIGSQESAAQAKDLIMEIVDSDSR 340
>gi|320586065|gb|EFW98744.1| far upstream element-binding protein [Grosmannia clavigera kw1407]
Length = 572
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 34/200 (17%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ IE+P + VG++IG+ G+ ++ ++ +S ++Q A A P TR +I G +
Sbjct: 213 ITETIEIPASLVGLIIGRQGENLKRVENDSHCRVQFL--AAASPDEETRQCKITGPGAQR 270
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAA------------------------ 295
A I +I ++ +P RG + + + +
Sbjct: 271 VIARTAIYQIIEDSGMSSAP----RGTGSDRGASSVGGRGAGGAGMGAAGGGGTTPLKDG 326
Query: 296 -EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMR 354
E V+I VP+ VGLIIGRGGETI+ LQ RSG I ++ + + R V + G
Sbjct: 327 EECVQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGEAKSV---NGLRPVNLIGARA 383
Query: 355 QIEIAQEMIKEVLSQTVRPS 374
A+E+I E++ R S
Sbjct: 384 MTNQAKELIMEIVDSDTRNS 403
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I VP+E VG+IIG+GGETI+ +QT++G +I + P G ER + + G ++ IE+A
Sbjct: 461 IFVPSEAVGMIIGKGGETIREMQTQTGCKINV--SQTP-GANENEREIGLIGSLQAIEMA 517
Query: 360 QEMIKEVLSQTVRPSTLSGGFNQQAYRP 387
+ I+E + + VR + S N Y P
Sbjct: 518 KLAIEEKV-EAVRAMSGSDDPNADPYAP 544
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
++ I VP+ VG++IGK G+TIR +Q +G KI +++ A+ + R + +IG+L I
Sbjct: 457 INDSIFVPSEAVGMIIGKGGETIREMQTQTGCKINVSQTPGANEN--EREIGLIGSLQAI 514
Query: 260 DKAEKLI 266
+ A+ I
Sbjct: 515 EMAKLAI 521
>gi|24645366|ref|NP_731354.1| pasilla, isoform B [Drosophila melanogaster]
gi|11526802|gb|AAG36787.1|AF220420_1 PASILLA splice variant 1 [Drosophila melanogaster]
gi|11526804|gb|AAG36788.1|AF220421_1 PASILLA splice variant 2 [Drosophila melanogaster]
gi|23170798|gb|AAN13427.1| pasilla, isoform B [Drosophila melanogaster]
Length = 475
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 30 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 89
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + T Q +QV+I VPN G+IIG+G
Sbjct: 90 EAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKG 144
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 145 GAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 196
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 109 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 164
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 165 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 197
>gi|24645368|ref|NP_731355.1| pasilla, isoform D [Drosophila melanogaster]
gi|23170799|gb|AAN13428.1| pasilla, isoform D [Drosophila melanogaster]
Length = 583
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 74 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 133
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + T Q +QV+I VPN G+IIG+G
Sbjct: 134 EAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKG 188
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 189 GAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 240
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 490 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 545
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 546 TITGQPSAIAKAQYLIEQKINE 567
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 153 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 208
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 209 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 241
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
S+ ++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I
Sbjct: 38 SSGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLIT 97
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGL--ATAQASGAAEQVEIKVPNEKVGLII 311
G+ I I I E P L + + + Q +QV+I VPN G+II
Sbjct: 98 GSTEAIMVVLDFIMDKIRE-----KPDLTTKIIDAESKQTQERDKQVKILVPNSTAGMII 152
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 153 GKGGAFIKQIKEDSGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 207
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G G ++ +Q+ SGA +QI++ P R V
Sbjct: 455 DLSSKD----SKNVEVPEMIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 510
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G + I KA+ LI I E
Sbjct: 511 TITGQPNAIAKAQFLIEQKITE 532
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G I+ ++ +SG+ +QI++ D R + IIG N A
Sbjct: 140 KILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPK-DVSLQERCITIIGDKENNKNA 198
Query: 263 EKLINAVIAE 272
K+I + I E
Sbjct: 199 CKMILSKIVE 208
>gi|330912641|ref|XP_003296022.1| hypothetical protein PTT_04425 [Pyrenophora teres f. teres 0-1]
gi|311332173|gb|EFQ95883.1| hypothetical protein PTT_04425 [Pyrenophora teres f. teres 0-1]
Length = 577
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P + D+S + I + ++ VG++IG+ G+++R ++ S +IQ ++ P R
Sbjct: 204 PPANDNSEV---ILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGPQ---RECR 257
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----------VEIK 301
I G+ A++ IN +I E GG+P+ A A +Q +I
Sbjct: 258 ITGSPGARISAKREINRIIEEN--GGNPARETGRNARPAAKTVGQQQPALREGEQSSQIM 315
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP+ VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G A+E
Sbjct: 316 VPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEN---KSVNGLRPVNLIGSPTAAAHAKE 372
Query: 362 MIKEVLSQTVRPSTLSGG 379
+I E++ + SGG
Sbjct: 373 LIMEIVDSDTKQMEGSGG 390
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 28/190 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+ +
Sbjct: 311 SSQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GENKSVNGLRPVNLIGSPTAAA 368
Query: 261 KAEKLINAVIAEAD------AGGSPSLVARGLATAQAS-------------GAAEQVEIK 301
A++LI ++ ++D +GG + + + I
Sbjct: 369 HAKELIMEIV-DSDTKQMEGSGGQQPQPQQQFNNRRETFDPYGGGAAGGAAAGKINDSIH 427
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQ 360
VP++ VG+IIG+GGETIK +Q+ +G +I ++ + G+ ER + + G + I+ A+
Sbjct: 428 VPSDAVGMIIGKGGETIKSMQSETGCKI-----NVSQASGADIEREIGLVGTRQAIDDAK 482
Query: 361 EMIKEVLSQT 370
I E + Q
Sbjct: 483 RAIWEKVDQV 492
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + T Q +QV+I VPN G+IIG+G
Sbjct: 123 EAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKG 177
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 178 GAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 229
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 479 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 534
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 535 TITGQPSAIAKAQYLIEQKINE 556
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 142 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 197
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 198 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D T K+ VP G +IGK GDTI LQ ++GA++++++ D P R I GT+
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTV 101
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR-------GLATAQASGAAEQVEIKVPNEKVGL 309
I + + I I E P L ++ G ATA+ +QV+I VPN G+
Sbjct: 102 DAIMEVMEFIMDKIRE-----KPDLTSKTTVDFDSGKATAERD---KQVKILVPNSTAGM 153
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
IIG+ G IK ++ SG+ +Q+ + +ER + V G+ A MI
Sbjct: 154 IIGKAGNYIKQIKEESGSYVQI--SQKAKDLSLQERCITVIGEKENNHRALHMI 205
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++V+I++ VG I+G GG + +Q SGA IQ+ + + G++ RIV +TG
Sbjct: 426 KKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGM-FAPGTRNRIVTITGYPNA 484
Query: 356 IEIAQEMIKEVLSQ 369
I AQ +I++ +S+
Sbjct: 485 INTAQYLIEQRISE 498
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D T K+ VP G +IGK GDTI LQ ++GA++++++ D P R I GT+
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTV 101
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR-------GLATAQASGAAEQVEIKVPNEKVGL 309
I + + I I E P L ++ G ATA+ +QV+I VPN G+
Sbjct: 102 DAIMEVMEFIMDKIRE-----KPDLTSKTTVDFDSGKATAERD---KQVKILVPNSTAGM 153
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
IIG+ G IK ++ SG+ +Q+ + +ER + V G+ A MI
Sbjct: 154 IIGKAGNYIKQIKEESGSYVQI--SQKAKDLSLQERCITVIGEKENNHRALHMI 205
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++V+I++ VG I+G GG + +Q SGA IQ+ + + G++ RIV +TG
Sbjct: 426 KKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGM-FAPGTRNRIVTITGYPNA 484
Query: 356 IEIAQEMIKEVLSQ 369
I AQ +I++ +S+
Sbjct: 485 INTAQYLIEQRISE 498
>gi|308486259|ref|XP_003105327.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
gi|308256835|gb|EFP00788.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
Length = 441
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+S KI +P++ VG +IGK G+ +R L+ ++ ++Q++++++ P + R + G L+NI
Sbjct: 43 LSIKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNI 102
Query: 260 DKAEKLINAVIAE--ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ I I E AD G+ + + + +++I +PN G++IG+ G
Sbjct: 103 MAVIESIQDKIREKCADQAGNDAF------DHKNTSRGNEIKIVMPNTSAGMVIGKSGAN 156
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRV 349
IK ++ + G +IQ+ P+ E S ER+V V
Sbjct: 157 IKDIREQFGCQIQVYPKAGSVEAKTSLERVVTV 189
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++I +P+ VG IIG+GGE ++ L+ + R+Q+ ++ G+ ERI V G + I
Sbjct: 45 IKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQM-SKNSETYPGTSERICLVKGRLNNIM 103
Query: 358 IAQEMIKEVLSQTV 371
E I++ + +
Sbjct: 104 AVIESIQDKIREKC 117
>gi|341893250|gb|EGT49185.1| hypothetical protein CAEBREN_32371 [Caenorhabditis brenneri]
Length = 430
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 11/174 (6%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+S KI +P+N VG +IGK G+ +R L+ ++ ++Q++++++ P + R + G L+NI
Sbjct: 43 LSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNI 102
Query: 260 DKAEKLINAVIAE--ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ I I E AD G+ + + T++ S +++I +PN G++IG+ G
Sbjct: 103 MAVIESIQDKIREKCADQAGNDAFDHKN--TSRGS----EIKIVMPNTSAGMVIGKSGAN 156
Query: 318 IKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQ--IEIAQEMIKEVLS 368
IK ++ +IQ+ P+ E S ER+V V + Q ++ A ++++V S
Sbjct: 157 IKDIREHFSCQIQVYPKAGSVEAKTSLERVVTVAHEESQALLQAASRVLEKVAS 210
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
++I +P+ VG IIG+GGE ++ L+ + R+Q+ ++ G+ ERI V G + I
Sbjct: 45 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQM-SKNSETYPGTSERICLVKGRLNNIM 103
Query: 358 IAQEMIKEVLSQTV 371
E I++ + +
Sbjct: 104 AVIESIQDKIREKC 117
>gi|195572282|ref|XP_002104125.1| GD18616 [Drosophila simulans]
gi|194200052|gb|EDX13628.1| GD18616 [Drosophila simulans]
Length = 330
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
DST KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 78 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 137
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR--GLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + + Q +QV+I VPN G+IIG+G
Sbjct: 138 EAIMVVMEFIMDKIRE-----KPDLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKG 192
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 193 GAFIKQIKEESGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 244
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G I+ ++ SG+ +QI++ D R + IIG N A
Sbjct: 177 KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPK-DVSLQERCITIIGDKENNKNA 235
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
K+I + I E G+ V+ G PN G ++ +Q
Sbjct: 236 CKMILSKIVEDPQSGTCLNVSYG-----------------PN----------GRSLVEIQ 268
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
SGA +Q+ + + G++ RIV +TG I AQ +I++ +++
Sbjct: 269 HVSGANVQISKKGIF-APGTRNRIVTITGQPSAIAKAQYLIEQKINE 314
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR--GLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + + Q +QV+I VPN G+IIG+G
Sbjct: 123 EAIMVVLEFIMDKIRE-----KPDLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKG 177
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P+ +ER + + GD + A +MI LS+ V
Sbjct: 178 GAFIKQIKEESGSYVQI--SQKPKDVSLQERCITIIGDKENNKNACKMI---LSKIV 229
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G G ++ +Q+ SGA +QI++ P R V
Sbjct: 479 DLSSKD----SKNVEVPEVIIGAILGPNGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 534
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 535 TITGQPSAIAKAQYLIEQKINE 556
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGK G I+ ++ SG+ +QI++ D R + IIG N A
Sbjct: 162 KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPK-DVSLQERCITIIGDKENNKNA 220
Query: 263 EKLINAVIAE 272
K+I + I E
Sbjct: 221 CKMILSKIVE 230
>gi|452003509|gb|EMD95966.1| hypothetical protein COCHEDRAFT_1127269 [Cochliobolus
heterostrophus C5]
Length = 574
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P + D+S + I + ++ VG++IG+ G+++R ++ S +IQ ++ P R
Sbjct: 203 PPANDNSEV---ILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGPQ---RECR 256
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----------VEIK 301
I G+ A++ IN +I E GG+P+ A A +Q +I
Sbjct: 257 ITGSPGARISAKREINRIIEEN--GGNPARETGRNARPTAKTVGQQQPALREGEQSSQIM 314
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP+ VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G A+E
Sbjct: 315 VPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEN---KSVNGLRPVNLIGSPAAAAHAKE 371
Query: 362 MIKEVLSQTVRPSTLSGGFNQQ 383
+I E++ + + G NQQ
Sbjct: 372 LIMEIVDSDTK--QMEGTGNQQ 391
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 53/202 (26%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+ +
Sbjct: 310 SSQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GENKSVNGLRPVNLIGSPAAAA 367
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV---------------------- 298
A++LI ++ ++D T Q G Q
Sbjct: 368 HAKELIMEIV-DSD-------------TKQMEGTGNQQPPSQQPFNNRRDNFDPYGAGAG 413
Query: 299 ---------EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVR 348
I VP++ VG+IIG+GGETIK +Q+ +G +I ++ + G+ ER +
Sbjct: 414 SAGAGKINDSIHVPSDAVGMIIGKGGETIKSMQSETGCKI-----NVSQASGADIEREIG 468
Query: 349 VTGDMRQIEIAQEMIKEVLSQT 370
+ G + I+ A+ I E + Q
Sbjct: 469 LVGTRQAIDDAKRAIWEKVEQV 490
>gi|322780737|gb|EFZ09994.1| hypothetical protein SINV_05815 [Solenopsis invicta]
Length = 483
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D T K+ VP G +IGK GDTI LQ ++GA++++++ D P R I GT+
Sbjct: 11 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTV 70
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVAR-------GLATAQASGAAEQVEIKVPNEKVGL 309
I + + I I E P L ++ G ATA+ +QV+I VPN G+
Sbjct: 71 DAIMEVMEFIMDKIRE-----KPDLTSKTTVDFDSGKATAERD---KQVKILVPNSTAGM 122
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
IIG+ G IK ++ SG+ +Q+ + +ER + V G+ A MI
Sbjct: 123 IIGKAGNYIKQIKEESGSYVQI--SQKAKDLSLQERCITVIGEKENNHRALHMI 174
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGKAG+ I+ ++ SG+ +QI++ A D R + +IG N +A
Sbjct: 112 KILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAK-DLSLQERCITVIGEKENNHRA 170
Query: 263 EKLINAVIAE 272
+I A +A+
Sbjct: 171 LHMILAKVAD 180
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++V+I++ VG I+G GG + +Q SGA IQ+ + + G++ RIV +TG
Sbjct: 395 KKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGM-FAPGTRNRIVTITGYPNA 453
Query: 356 IEIAQEMIKEVLSQ 369
I AQ +I++ +S+
Sbjct: 454 INTAQYLIEQRISE 467
>gi|345564985|gb|EGX47941.1| hypothetical protein AOL_s00081g268 [Arthrobotrys oligospora ATCC
24927]
Length = 691
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 35/206 (16%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TI+ LQ SG I I ++ RPV +IGT
Sbjct: 399 SMQIMVPDKTVGLIIGRRGETIQDLQDRSGCHINIV--GESKSVNGFRPVNLIGTTEAAM 456
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE--------------------- 299
+A+ LI ++ E+D P +
Sbjct: 457 RAKALIMEIV-ESDVRPGPGGPGPQGGGSSGGSGGGGGGGGGGGGGGGGRQQGGGYGNQG 515
Query: 300 -------IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
I+VP + VG+IIG+GGETIK +Q +G RI ++ Q +G ER + ++G
Sbjct: 516 GDKNGETIRVPIDAVGMIIGKGGETIKEMQNTTGCRINVLSQQTSDG----EREISLSGP 571
Query: 353 MRQIEIAQEMIKEVLSQTVRPSTLSG 378
I A+ I E + R L G
Sbjct: 572 PDAIARAKAAIDEKVDTARRQGQLKG 597
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VGLIIGR GET+K ++ SGAR+Q + + G ER+ +TG ++ A++ I+ +
Sbjct: 244 VGLIIGRRGETLKRVEEMSGARVQFV----ADSRGEPERVCNITGPRAAVQSARQQIQTI 299
Query: 367 LSQT 370
+S+
Sbjct: 300 ISEN 303
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG++IG+ G+T++ ++ SGA++Q D+ +P R I G + + A + I +I
Sbjct: 244 VGLIIGRRGETLKRVEEMSGARVQFVADSRGEPE---RVCNITGPRAAVQSARQQIQTII 300
Query: 271 AEADA 275
+E A
Sbjct: 301 SENSA 305
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
++ + T KI VP G +IGK G+TI LQ +GA++++++ D P R I
Sbjct: 32 ASGNGTFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLIT 91
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSP---SLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
G++ + + + I I E P + +A Q + +QV+I VPN G+I
Sbjct: 92 GSVEGVLRIHEFIMEKIKE-----KPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMI 146
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
IG+GG IK ++ SGA +Q+ + + ER + V G+M + A ++I
Sbjct: 147 IGKGGSYIKQIKEESGAYVQISQK--SKDHALAERCITVIGEMDNNKKACQLI 197
>gi|448538474|ref|XP_003871504.1| Pbp2 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355861|emb|CCG25380.1| Pbp2 RNA binding protein [Candida orthopsilosis]
Length = 579
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 202/493 (40%), Gaps = 115/493 (23%)
Query: 17 LKRKLDDLEPD-EALEHAEGMRDDEAKNSDEVEKNVDGFAEAHGSEVKRP-----RLDDD 70
LKRK +DL D E E+ A +S+++EK + +E GS+ + P R DD+
Sbjct: 14 LKRKNEDLNNDVEDSENPTSHNKRIALDSEQLEKE-EASSEVIGSKGETPGKNQVRFDDE 72
Query: 71 KTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASVDNQ 130
+ ++P N EE DE D K+E+ E+K +Q DN
Sbjct: 73 ENDEPHDEQN-----EEHEDE-------QNDEPKDED--KGELKYDQ---------TDNH 109
Query: 131 QISVKEETKEVLFSTEEAFIDVKEE-TKEVTVKEEETVK-EEESVEPSNVV-----PQQV 183
KEE +E F+ A D EE +K TV ++E K EE+ S + PQQ
Sbjct: 110 NNGEKEEDEEPKFN---AVTDNNEENSKAKTVSQDEVEKFLEEAALLSKLSQPQPEPQQH 166
Query: 184 VDNSK--------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
++ S S +D S +S ++ P + ++GK G I +L+ + KIQI
Sbjct: 167 LEESAQATSNPVASQKDYESDPSYVSFRMYCPVKEASTVVGKQGAKINHLREKADVKIQI 226
Query: 236 TRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAA 295
+ + P R + + GT N+ +A LI I G P V L++ Q +
Sbjct: 227 SDNLRGVPE---RIITVRGTAENVARAFGLIVRTIL-----GEPEDVPANLSSQQYN--- 275
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
+++ VPN +G IIG+ G + ++ S A+++ Q LP S +R++ V G
Sbjct: 276 --LKLLVPNAIIGYIIGKQGLKFREIEENSAAKLKAAEQPLPH---STDRVLSVLGVADA 330
Query: 356 IEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRP---------------------------- 387
I IA I EV+ + L G Y P
Sbjct: 331 IHIAVYFIAEVVIE--HKDVLKKG-RVILYNPANHQHEENQHGGNQQQQQQQQHHQQQHH 387
Query: 388 --RVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP--HLPYG-------NYPPQQ 436
R P+ P P + P+ Y + P+PS +PH P H PY + PPQQ
Sbjct: 388 QSRFPSIPQIGAPPSNQYGSPIGY----QKPFPSDSPHQPQSHQPYNFSMMFQPSVPPQQ 443
Query: 437 MAPRSNYGGPPNM 449
YG P M
Sbjct: 444 Q-----YGIPQQM 451
>gi|442618212|ref|NP_001262414.1| pasilla, isoform Q [Drosophila melanogaster]
gi|440217246|gb|AGB95796.1| pasilla, isoform Q [Drosophila melanogaster]
Length = 517
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
+ ++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I
Sbjct: 5 CSSETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLIT 64
Query: 254 GTLSNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLII 311
G+ I + I I E P L + + T Q +QV+I VPN G+II
Sbjct: 65 GSTEAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMII 119
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 120 GKGGAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 174
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 424 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 479
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 480 TITGQPSAIAKAQYLIEQKINE 501
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 87 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 142
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 143 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 175
>gi|189200062|ref|XP_001936368.1| far upstream element-binding protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983467|gb|EDU48955.1| far upstream element-binding protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 572
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P + D+S + I + ++ VG++IG+ G+++R ++ S +IQ ++ P R
Sbjct: 200 PPANDNSEV---ILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGPQ---RECR 253
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----------VEIK 301
I G+ A++ IN +I E GG+P+ A A +Q +I
Sbjct: 254 ITGSPGARISAKREINRIIEEN--GGNPARETGRNARPAAKTVGQQQPALREGEQSSQIM 311
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQE 361
VP+ VGLIIGRGGETI+ LQ RSG + ++ ++ + R V + G A+E
Sbjct: 312 VPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSV---NGLRPVNLIGSPTAAAHAKE 368
Query: 362 MIKEVLSQTVRPSTLSGG 379
+I E++ + SGG
Sbjct: 369 LIMEIVDSDTKQMEGSGG 386
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 28/190 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+ +
Sbjct: 307 SSQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GENKSVNGLRPVNLIGSPTAAA 364
Query: 261 KAEKLINAVIAEAD------AGGSPSLVARGLATAQAS-------------GAAEQVEIK 301
A++LI ++ ++D +GG + + + I
Sbjct: 365 HAKELIMEIV-DSDTKQMEGSGGQQPQPQQQFNNRRETFDPYGGGTAAGAAAGKINDSIH 423
Query: 302 VPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQ 360
VP++ VG+IIG+GGETIK +Q+ +G +I ++ + G+ ER + + G + I+ A+
Sbjct: 424 VPSDAVGMIIGKGGETIKSMQSETGCKI-----NVSQASGADIEREIGLVGTRQAIDDAK 478
Query: 361 EMIKEVLSQT 370
I E + Q
Sbjct: 479 RAIWEKVDQV 488
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D T K+ VP G +IGK GDTI LQ ++GAK++I++ D P R I G+L
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSL 101
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAA----EQVEIKVPNEKVGLIIG 312
I I I E P L + +++ +QV+I VPN G+IIG
Sbjct: 102 EAIMAVMDFIMDKIRE-----KPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIG 156
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ G IK ++ SG+ +Q+ + +ER + V G+ A MI
Sbjct: 157 KAGNYIKQIKEESGSYVQI--SQKAKDVSLQERCITVIGEKENNRNALMMI 205
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++V+I++ VG I+G GG + +Q SGA IQ+ + + G++ RIV +TG
Sbjct: 426 KKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGM-FAPGTRNRIVTITGYPNA 484
Query: 356 IEIAQEMIKEVLSQ 369
I AQ +I++ +S+
Sbjct: 485 INTAQYLIEQRISE 498
>gi|313234826|emb|CBY24770.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VGV+IGKAG+TI +Q + +IQ D DP R IIG A+K
Sbjct: 243 IPKVSVGVVIGKAGETINRIQEQTQTRIQFVPD---DPKILERGCYIIGPQEGCLVAQKE 299
Query: 266 INAVIAEA--DAGGS----PSLVARGL---------ATAQASGAAEQVEIKVPNEKVGLI 310
+ V+ + + GS P LV G A+ G +QV+ VP + G++
Sbjct: 300 VLEVVRKKMEEVEGSKQPMPKLVFDGKRYVKQDGMNASHHNGGGEQQVDYPVPASRAGVV 359
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
IG+GGETI G++ ++GA +Q+ P + + + G+ +QI AQ++I+E
Sbjct: 360 IGKGGETINGIKEKTGAFVQI--NKNPPAEHPDWKYFTIRGNSQQIAHAQKLIQE 412
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA-DPHAATRPVE 251
+++ D +I +P++K G++IGKAG+T+R L+ G + + + DP +P+
Sbjct: 147 TASLDGNCMEEIIIPHDKCGIVIGKAGNTLRNLRSQFGCSVNLDSTVNTGDP----KPLR 202
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR-GLATAQASGAAEQVEIKVPNEKVGLI 310
I G DK +N V+AE + A+ + + +QV +P VG++
Sbjct: 203 IAGPP---DK----VNLVVAEV----HKMMAAKENITHTKVPDGQDQVTFMIPKVSVGVV 251
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IG+ GETI +Q ++ RIQ +P P+ ER + G +AQ+ + EV+ +
Sbjct: 252 IGKAGETINRIQEQTQTRIQFVPDD-PK---ILERGCYIIGPQEGCLVAQKEVLEVVRKK 307
Query: 371 V 371
+
Sbjct: 308 M 308
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP+ VG++IG+ GD I +Q +SG ++ + + +RP + G I+ A+K+
Sbjct: 56 VPDAMVGLIIGRGGDQITKIQADSGCRVAVVPQSTG---GTSRPCTLTGNPEQIEAAKKM 112
Query: 266 INAVIA-----EADA-GGSPSLVARGL------ATAQASGAAEQVEIKVPNEKVGLIIGR 313
+ +I E D G P+ A L ATA G + EI +P++K G++IG+
Sbjct: 113 LADIITRGSVKEGDVFNGHPAPSANDLMNQNVAATASLDGNCME-EIIIPHDKCGIVIGK 171
Query: 314 GGETIKGLQTRSGARIQL 331
G T++ L+++ G + L
Sbjct: 172 AGNTLRNLRSQFGCSVNL 189
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E VP+ VGLIIGRGG+ I +Q SG R+ ++PQ G R +TG+ QIE
Sbjct: 53 EFPVPDAMVGLIIGRGGDQITKIQADSGCRVAVVPQST----GGTSRPCTLTGNPEQIEA 108
Query: 359 AQEMIKEVLSQ 369
A++M+ +++++
Sbjct: 109 AKKMLADIITR 119
>gi|313246067|emb|CBY35030.1| unnamed protein product [Oikopleura dioica]
Length = 564
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VGV+IGKAG+TI +Q + +IQ D DP R IIG A+K
Sbjct: 255 IPKVSVGVVIGKAGETINRIQEQTQTRIQFVPD---DPKILERGCYIIGPQEGCLVAQKE 311
Query: 266 INAVIAEA--DAGGS----PSLVARGL---------ATAQASGAAEQVEIKVPNEKVGLI 310
+ V+ + + GS P LV G A+ G +QV+ VP + G++
Sbjct: 312 VLEVVRKKMEEVEGSKQPMPKLVFDGKRYVKQDGMNASHHNGGGEQQVDYPVPASRAGVV 371
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
IG+GGETI G++ ++GA +Q+ P + + + G+ +QI AQ++I+E
Sbjct: 372 IGKGGETINGIKEKTGAFVQI--NKNPPAEHPDWKYFTIRGNSQQIAHAQKLIQE 424
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA-DPHAATRPVE 251
+++ D +I +P++K G++IGKAG+T+R L+ G + + + DP +P+
Sbjct: 159 TASLDGNCMEEIIIPHDKCGIVIGKAGNTLRNLRSQFGCSVNLDSTVNTGDP----KPLR 214
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR-GLATAQASGAAEQVEIKVPNEKVGLI 310
I G DK +N V+AE + A+ + + +QV +P VG++
Sbjct: 215 IAGPP---DK----VNLVVAEV----HKMMAAKENITHTKVPDGQDQVTFMIPKVSVGVV 263
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IG+ GETI +Q ++ RIQ +P P+ ER + G +AQ+ + EV+ +
Sbjct: 264 IGKAGETINRIQEQTQTRIQFVPDD-PK---ILERGCYIIGPQEGCLVAQKEVLEVVRKK 319
Query: 371 V 371
+
Sbjct: 320 M 320
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP+ VG++IG+ GD I +Q +SG ++ + + +RP + G I+ A+K+
Sbjct: 68 VPDAMVGLIIGRGGDQITKIQADSGCRVAVVPQSTG---GTSRPCTLTGNPEQIEAAKKM 124
Query: 266 INAVIA-----EADA-GGSPSLVARGL------ATAQASGAAEQVEIKVPNEKVGLIIGR 313
+ +I E D G P+ A L ATA G + EI +P++K G++IG+
Sbjct: 125 LADIITRGSVKEGDVFNGHPAPSANDLMNQNVAATASLDGNCME-EIIIPHDKCGIVIGK 183
Query: 314 GGETIKGLQTRSGARIQL 331
G T++ L+++ G + L
Sbjct: 184 AGNTLRNLRSQFGCSVNL 201
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E VP+ VGLIIGRGG+ I +Q SG R+ ++PQ G R +TG+ QIE
Sbjct: 65 EFPVPDAMVGLIIGRGGDQITKIQADSGCRVAVVPQS----TGGTSRPCTLTGNPEQIEA 120
Query: 359 AQEMIKEVLSQ 369
A++M+ +++++
Sbjct: 121 AKKMLADIITR 131
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D T K+ VP G +IGK GDTI LQ ++GAK++I++ D P R I G+L
Sbjct: 63 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSL 122
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAA----EQVEIKVPNEKVGLIIG 312
I I I E P L + +++ +QV+I VPN G+IIG
Sbjct: 123 EAIMAVMDFIMDKIRE-----KPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIG 177
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
+ G IK ++ SG+ +Q+ + +ER + V G+ A MI
Sbjct: 178 KAGNYIKQIKEESGSYVQI--SQKAKDVSLQERCITVIGEKENNRNALMMI 226
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VPN+ G++IGKAG+ I+ ++ SG+ +QI++ A D R + +IG N A
Sbjct: 164 KILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAK-DVSLQERCITVIGEKENNRNA 222
Query: 263 EKLINAVIAE 272
+I A +A+
Sbjct: 223 LMMILAKVAD 232
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ 355
++V+I++ VG I+G GG + +Q SGA IQ+ + + G++ RIV +TG
Sbjct: 447 KKVDIEIAEVIVGAILGPGGRALIEIQHLSGANIQISKKGMF-APGTRNRIVTITGYPNA 505
Query: 356 IEIAQEMIKEVLSQ 369
I AQ +I++ +S+
Sbjct: 506 INTAQYLIEQRISE 519
>gi|389638780|ref|XP_003717023.1| hypothetical protein MGG_12809 [Magnaporthe oryzae 70-15]
gi|351642842|gb|EHA50704.1| hypothetical protein MGG_12809 [Magnaporthe oryzae 70-15]
Length = 498
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP+ VG++IG+ G+TIR LQ SG I I + RPV +IG++ +A
Sbjct: 222 QIMVPDRTVGLIIGRGGETIRDLQERSGCHINIV--GEQKSVNGLRPVNLIGSMETTTRA 279
Query: 263 EKLINAVIAEADAGGSPSLV--------------ARGLATAQASGAAEQVE--IKVPNEK 306
+ LI ++ ++D + RG G ++ I VP+E
Sbjct: 280 KNLIMEIV-DSDTRNGGAPGGGGGGRPQYGDGPPGRGQRGDHMGGGPDKTNDSIYVPSEA 338
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
VG+IIG+GGETI+ +Q+ +G +I + P ER + + G + I A++ I++
Sbjct: 339 VGMIIGKGGETIREMQSSTGCKINVSQSSGPN---ETEREIGLVGSLDAIARAKQAIED 394
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
DD++ +IE + VG++IG+ G+ +R ++ ++ ++Q A D R +I G
Sbjct: 111 DDNSEIMQIEA--SLVGLIIGRGGENLRRIENDTQCRVQFLPAAPTD--GDHRQCKISGP 166
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARGL----------------ATAQASGAAEQVE 299
+A IN +I D+G +P + RG A + E ++
Sbjct: 167 AFRRAEARAAINRIID--DSGMAP--LNRGGGGGGGGGYNAGGRDRNAVIEPKEGEECIQ 222
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I VP+ VGLIIGRGGETI+ LQ RSG I ++ + + + R V + G M A
Sbjct: 223 IMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGE---QKSVNGLRPVNLIGSMETTTRA 279
Query: 360 QEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSH 402
+ +I E++ R RP+ GPP G RG H
Sbjct: 280 KNLIMEIVDSDTRNGGAP--GGGGGGRPQYGDGPPGRGQRGDH 320
>gi|313246366|emb|CBY35281.1| unnamed protein product [Oikopleura dioica]
Length = 641
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP VGV+IG+ G+ I +Q + +IQ D DP R I GT
Sbjct: 231 SIEVSVPKAAVGVVIGRGGENISKIQNETNTRIQFKTD---DPTQDVRSCSISGTPEACQ 287
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
A I+ + + P L G + VE VP + G++IG+GGE I+
Sbjct: 288 VANDRISEIARQKLQEQHPPL--HGNNDSSFMQGQHCVEYPVPASRAGVVIGKGGENIRL 345
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
++ SGA +Q+ +GD K I+R G +QI+ AQ++I++
Sbjct: 346 IKENSGAFVQIEKNASDKGDNWKTFIIR--GTEQQIQEAQKLIQD 388
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 33/198 (16%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+PQQ+ DN I VP+ VG++IGK G+ I +Q +G ++QI +
Sbjct: 41 IPQQIQDN-----------------ISVPDQLVGLIIGKNGEQINRIQQETGCRVQIVPN 83
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV 298
+ + RP + GT + A++ +N +I G P + G +
Sbjct: 84 STG---GSERPCTLTGTFHQVHHAKQKLNEIITR----GGPRENGMSYGENKHQGQFNII 136
Query: 299 -------EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG 351
E+++P +K GLIIG+GG T+K L ++ L+ + E+ +++ G
Sbjct: 137 FLNQMQHEMQIPPDKCGLIIGKGGNTLKQLMQEFNVKLHLVQE--SAEITRDEKPLKIIG 194
Query: 352 DMRQIEIAQEMIKEVLSQ 369
+ +E A+ I +++Q
Sbjct: 195 TPQAVESAKNAIVGLMAQ 212
>gi|161078120|ref|NP_001036697.1| pasilla, isoform J [Drosophila melanogaster]
gi|19527741|gb|AAL89985.1| AT03366p [Drosophila melanogaster]
gi|113194765|gb|ABI31154.1| pasilla, isoform J [Drosophila melanogaster]
Length = 539
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
++T KI VP G +IGK G+TI LQ ++GA++++++ D P R I G+
Sbjct: 30 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 89
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLAT--AQASGAAEQVEIKVPNEKVGLIIGRG 314
I + I I E P L + + T Q +QV+I VPN G+IIG+G
Sbjct: 90 EAIMVVMEFIMDKIRE-----KPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKG 144
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G IK ++ SG+ +Q+ P +ER + + GD + A +MI LS+ V
Sbjct: 145 GAFIKQIKEESGSYVQI--SQKPTDVSLQERCITIIGDKENNKNACKMI---LSKIV 196
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D SS D S+ +EVP +G ++G +G ++ +Q+ SGA +QI++ P R V
Sbjct: 446 DLSSKD----SKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIV 501
Query: 251 EIIGTLSNIDKAEKLINAVIAE 272
I G S I KA+ LI I E
Sbjct: 502 TITGQPSAIAKAQYLIEQKINE 523
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ ++VD D T + KI VPN+ G++IGK G I+ ++ SG+ +QI++
Sbjct: 109 LTNKIVDT----DSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK 164
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
D R + IIG N A K+I + I E
Sbjct: 165 P-TDVSLQERCITIIGDKENNKNACKMILSKIVE 197
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+ T KI VP G +IGK G+TI LQ +GA++++++ D P R I G++
Sbjct: 47 NGTYHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSV 106
Query: 257 SNIDKAEKLINAVIAEADAGGSPSL-VARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+ + + I I E P+ +A Q + +QV+I VPN G+IIG+GG
Sbjct: 107 EGVLRIHEFIMEKIKEKP---DPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGKGG 163
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
IK ++ SGA +Q+ + ER + V G++ + A MI L++ V
Sbjct: 164 SYIKQIKEESGAYVQI--SQKSKDHALAERCITVIGELENNKKACHMI---LAKIVEDPQ 218
Query: 376 LSGGFNQQAYRPRVPTGP-PQWGPRGS---HPSQPMAYDYPQRGPYPSQN 421
SG +Y TGP + P GS +PS + +P P + N
Sbjct: 219 -SGSCLHVSYAE--VTGPVANFNPTGSPYANPSSSLVPSFPGVAPAVAGN 265
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+ R +EV N VG ++G G ++ +Q SGA IQI++ P R V I G+ + +
Sbjct: 387 VKRDLEVGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGIFAPGTRNRIVTITGSPNAV 446
Query: 260 DKAEKLINAVIAEADA 275
A+ LI IAE +A
Sbjct: 447 STAQYLIEQQIAEEEA 462
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
G A A+ +G A + +++V VG I+G GG+++ +Q SGA IQ+ + + G++
Sbjct: 376 GGAVAEKAGDAVKRDLEVGENIVGAILGPGGKSLVEIQRFSGAAIQISKKGI-FAPGTRN 434
Query: 345 RIVRVTGDMRQIEIAQEMIKEVLSQ 369
RIV +TG + AQ +I++ +++
Sbjct: 435 RIVTITGSPNAVSTAQYLIEQQIAE 459
>gi|397604059|gb|EJK58596.1| hypothetical protein THAOC_21266, partial [Thalassiosira oceanica]
Length = 523
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 164 EETVKEEESVEPSNVVPQQVVDNSKSDDPSST---DDSTMSRKI-----EVPNNKVGVLI 215
EE KEE+ P +K DP++T DD +KI E+P + VG +I
Sbjct: 58 EEVSKEEQQQPPK----------TKPFDPAATEPPDDQLDDKKIIQDTSELPPSYVGRVI 107
Query: 216 GKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADA 275
GK G+ IR LQ SG ++I D + PH A R + GT + I+ A+KL+ + E
Sbjct: 108 GKGGEMIRDLQARSGC-LRIDVDQNV-PHNAPRIISYRGTRAKIEFAKKLVQRLCRE--- 162
Query: 276 GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQH 335
G+ + + G A+ + ++VP +G +IGR G+ I+ LQ S A+IQ+ H
Sbjct: 163 DGNEAELPLGDASIK--------RVRVPANTIGKVIGRKGDMIRRLQHDSMAKIQV--DH 212
Query: 336 LPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+ ER + VTG + A+EMI + S
Sbjct: 213 --SNNQGHERTIVVTGMKDAVTKAEEMILFLTS 243
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 68/231 (29%)
Query: 202 RKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI----------TRDADADPHAATRPVE 251
+++ VP N +G +IG+ GD IR LQ++S AKIQ+ T A T+ E
Sbjct: 177 KRVRVPANTIGKVIGRKGDMIRRLQHDSMAKIQVDHSNNQGHERTIVVTGMKDAVTKAEE 236
Query: 252 IIGTLSN---IDKAEKLINAVIAEADAG----------GSPS------------------ 280
+I L++ D A+ L V +A++G G P+
Sbjct: 237 MILFLTSNPLCDAAQSLAMLVGHKANSGKPWGSGPPYEGLPNNGIGMTEQCIPSHFGGGG 296
Query: 281 ------------------------LVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
+V+ G + +G E + +P ++G IIG+ G
Sbjct: 297 YGNSVGGGGMVMPQQQTTINEFGNVVSAGYSNTSGNGGIECEVVPMPKFQMGRIIGQKGV 356
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
TI LQ RSG IQ+ ++ G ++ V + G + IE+A++M+++++
Sbjct: 357 TINDLQKRSGCDIQIDQKNAQPG---QDCPVSIKGSRQGIEMAKKMLQDII 404
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 307 VGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEV 366
VG +IG+GGE I+ LQ RSG + Q++P + RI+ G +IE A+++++ +
Sbjct: 103 VGRVIGKGGEMIRDLQARSGCLRIDVDQNVPH---NAPRIISYRGTRAKIEFAKKLVQRL 159
Query: 367 LSQTVRPSTLSGGFNQQAYRPRVP 390
+ + L G + R RVP
Sbjct: 160 CREDGNEAELPLG-DASIKRVRVP 182
>gi|303290086|ref|XP_003064330.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453928|gb|EEH51235.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 156
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
I+ P VG +IGK G+TI+ LQ SGA I I ++ P A R + I G +D A
Sbjct: 14 IDCPPGLVGRVIGKGGETIKGLQAQSGAHITIDQNY---PDGAPRKISISGPAGCVDIAS 70
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
KL+ ++ G A+Q+ ++ P + VG +IGRGGETIKGLQ+
Sbjct: 71 KLVEDLLKGGPVR----------GGGVGPGQAQQI-VECPKDMVGRVIGRGGETIKGLQS 119
Query: 324 RSGARIQL 331
++GARIQ+
Sbjct: 120 QTGARIQI 127
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
KI VP+ G +IGK G+ I +Q + AK+++++ P R I+GT+ +I +
Sbjct: 46 KILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVGTIESILRV 105
Query: 263 EKLINAVIAEADAGGSPSLVAR-GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
+ I+ I E P V + G + +QV+I VPN G+IIG+GG IK L
Sbjct: 106 FQYISEKIYEK-----PESVPKTGCEGRVLTERHKQVKILVPNSTAGMIIGKGGSFIKEL 160
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFN 381
+ +G IQ + Q E + + ER V V G++ Q A +I +++ + S+
Sbjct: 161 KDTTGVFIQ-VSQKSKELNLA-ERCVTVAGELSQTRDAIALILSKIAEDPQSSSCPNISY 218
Query: 382 QQAYRPRV---PTGPPQWGPRGSHPSQP 406
+ P PTG P GSHP P
Sbjct: 219 SEIIGPVASAYPTGSPYALAVGSHPGLP 246
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 18/170 (10%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH--AATRPVEIIGTLSNIDKAEKLINA 268
VG +IG+ G IR L S A++++ R DPH A R V I G+L+N +A + +
Sbjct: 197 VGAIIGRGGANIRQLSQVSRARVELERR---DPHLGAVGRRVFIDGSLNNTVEAFRALVQ 253
Query: 269 VIAEADA---GGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
++A+ D G P +A +++ +P E VG +IGR G +IK + S
Sbjct: 254 LMADNDVELNGEEP---------VEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITETS 304
Query: 326 GARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPST 375
GA I+L+P P + S RIV++ G RQ+ A ++ S +R S
Sbjct: 305 GAGIELLPLQYP-ANMSPVRIVKIEGTPRQLTHAFALMLRKFSNAMRRSM 353
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ VP VG LIG+ G I+++ +GA+I+I D R + GT +A
Sbjct: 398 VRVPAWSVGALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQVRAH 457
Query: 264 KLINAVIAEADAGGS--PSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
LI + + A + P T S V ++VP KVG +IGRGG TI+ +
Sbjct: 458 ALIFRRMQDEQARLNIPP--------TDPRSNDLFPVVMEVPAAKVGRVIGRGGATIRDI 509
Query: 322 QTRSGARIQL 331
Q ++G +++
Sbjct: 510 QQKTGVGVEV 519
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 172 SVEPSNVVPQQVVDNS---KSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYN 228
+VE + Q + DN ++P +D S ++ +P VG LIG+AG +I+Y+
Sbjct: 244 TVEAFRALVQLMADNDVELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITET 303
Query: 229 SGAKIQIT---RDADADPHAATRPVEIIGTLSNIDKAEKLI-----NAVIAEADAGGSPS 280
SGA I++ A+ P R V+I GT + A L+ NA+ + P
Sbjct: 304 SGAGIELLPLQYPANMSP---VRIVKIEGTPRQLTHAFALMLRKFSNAMRRSMEVMRGPP 360
Query: 281 LVARGLATAQASGA------------------AEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
++ Q E + ++VP VG +IGRGG IK +
Sbjct: 361 MMGMMQQQQQQMPGMAPPYVPGYGPGPMMMAPVEVITVRVPAWSVGALIGRGGSNIKHMM 420
Query: 323 TRSGARIQL 331
+GA I++
Sbjct: 421 EETGAEIRI 429
>gi|1709303|sp|P51513.1|NOVA1_HUMAN RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Onconeural ventral antigen 1; AltName:
Full=Paraneoplastic Ri antigen; AltName: Full=Ventral
neuron-specific protein 1
gi|440878|gb|AAA16022.1| onconeural ventral antigen-1 [Homo sapiens]
Length = 510
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR---DADADPHAATRPVEIIGTLSNI 259
K+ +P+ G +IGK G TI LQ +GA I++++ D P R I GT+ +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEAL 112
Query: 260 DKAEKLINAVIAEA---------------DAGGSPSLVARGLATA-----------QASG 293
+ I I E +P + + L ++ +
Sbjct: 113 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 172
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDM 353
A QV+I VPN GLIIG+GG T+K + +SGA +QL P+G +ER+V V+G+
Sbjct: 173 RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPDGINLQERVVTVSGEP 230
Query: 354 RQIEIAQEMI 363
Q A E+I
Sbjct: 231 EQNRKAVELI 240
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 194 STDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
STD S +I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I
Sbjct: 419 STDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTIT 478
Query: 254 GTLSNIDKAEKLI 266
GT + A+ LI
Sbjct: 479 GTPAATQAAQYLI 491
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 293 GAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--QHLPEGDGSKERIVRVT 350
G+ + VEI VP VG I+G+GG+T+ Q +GARIQ+ + +P G++ R V +T
Sbjct: 422 GSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTIT 478
Query: 351 GDMRQIEIAQEMIKEVLS--QTVR 372
G + AQ +I + ++ Q VR
Sbjct: 479 GTPAATQAAQYLITQRITYEQGVR 502
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 15/82 (18%)
Query: 174 EPSNVV-PQQVV--DNSKSDDPSS--------TDDSTMSR----KIEVPNNKVGVLIGKA 218
EP +++ PQ V D K PSS +D T SR KI VPN+ G++IGK
Sbjct: 134 EPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKG 193
Query: 219 GDTIRYLQYNSGAKIQITRDAD 240
G T++ + SGA +Q+++ D
Sbjct: 194 GATVKAVMEQSGAWVQLSQKPD 215
>gi|313233410|emb|CBY24525.1| unnamed protein product [Oikopleura dioica]
Length = 639
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 31/176 (17%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+PQQ+ DN I VP+ VG++IGK G+ I +Q +G ++QI +
Sbjct: 41 IPQQIQDN-----------------ISVPDQLVGLIIGKNGEQINRIQQETGCRVQIVPN 83
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV 298
+ + RP + GT + A++ +N +I G P + G +
Sbjct: 84 STG---GSERPCTLTGTFHQVHHAKQKLNEIITR----GGPRENGMSYGENKHQGQFNII 136
Query: 299 -------EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIV 347
E+++P +K GLIIG+GG T+K L ++ L+ + + +K IV
Sbjct: 137 FLNQMQHEMQIPPDKCGLIIGKGGNTLKQLMQEFNVKLHLVQVSFVKVESAKIAIV 192
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 152 VKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTM----SRKIEVP 207
+K+ +E VK VE + + ++ P+++ +T S ++ VP
Sbjct: 163 LKQLMQEFNVKLHLVQVSFVKVESAKIAIVGLMAQKDGAKPAASIINTKTVGHSIEVSVP 222
Query: 208 NNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLIN 267
VGV+IG+ G+ I +Q + +IQ D DP R I GT A I+
Sbjct: 223 KAAVGVVIGRGGENISKIQNETNTRIQFKTD---DPTQDVRSCSISGTPEACQVANDRIS 279
Query: 268 AVIAEADAGGSPSLVARGLATAQASG-----------AAEQVEIKVPNEKVGLIIGRGGE 316
+ + P L ++ S VE VP + G++IG+GGE
Sbjct: 280 EIARQKLQEQHPPLHGNNDSSFIVSHYFLLPNNIFRQGQHCVEYPVPASRAGVVIGKGGE 339
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
I+ ++ SGA +Q+ +GD K I+R G +QI+ AQ++I++
Sbjct: 340 NIRLIKENSGAFVQIEKNASDKGDNWKTFIIR--GTEQQIQEAQKLIQD 386
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
Q I VP++ VGLIIG+ GE I +Q +G R+Q++ P G ER +TG Q+
Sbjct: 46 QDNISVPDQLVGLIIGKNGEQINRIQQETGCRVQIV----PNSTGGSERPCTLTGTFHQV 101
Query: 357 EIAQEMIKEVLSQ 369
A++ + E++++
Sbjct: 102 HHAKQKLNEIITR 114
>gi|412986388|emb|CCO14814.1| predicted protein [Bathycoccus prasinos]
Length = 594
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 20/178 (11%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
+ +I P G +IG G+ I LQ + A ++I AD P A R + I G +
Sbjct: 263 IIEQIPCPQENAGKVIGHGGEKINQLQQATKAIVKIQSSADV-PKGAPRLITIAGAPECV 321
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ-----VEIKVPNEKVGLIIGRG 314
A I ++ +A +P A + QA+ A Q + I VP+ +G +IGRG
Sbjct: 322 RHA---IEQLLPVVNASKAPP--ANNIPVFQANMGAPQQQVLEIRIAVPDNMIGRVIGRG 376
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
GETIK + SGAR+Q+ E + ++ V GD Q+EIA+ +I ++++ VR
Sbjct: 377 GETIKRISDESGARLQI------ERESNE---VSAKGDASQLEIARMLIHDIVTAPVR 425
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 95/178 (53%), Gaps = 29/178 (16%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+ +I VP+N +G +IG+ G+TI+ + SGA++QI R+++ V G S
Sbjct: 357 VLEIRIAVPDNMIGRVIGRGGETIKRISDESGARLQIERESNE--------VSAKGDASQ 408
Query: 259 IDKAEKLINAVIA----EADAGGSPSLVARGLATAQASGAAEQVEIKVPNE-KVGLIIGR 313
++ A LI+ ++ +A A G+ G T+ G E V I++ ++ + G IIGR
Sbjct: 409 LEIARMLIHDIVTAPVRQAPAPGA------GAGTS-GEGKPEYVVIEIDSQGQEGRIIGR 461
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
GGE I+ + SGA+IQ+ + ++++++G ++E A+ M++ ++ V
Sbjct: 462 GGENIRSMAMTSGAKIQI---------DKETKMIKISGFKDKVETAKHMLEAFMADYV 510
>gi|223673779|pdb|2JVZ|A Chain A, Solution Nmr Structure Of The Second And Third Kh Domains
Of Ksrp
Length = 164
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I +P K G++IGK G+TI+ LQ +G K+ + +D + + +P+ IIG + +A
Sbjct: 5 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNV-DKPLRIIGDPYKVQQA 63
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+++ ++ E D GG G S +++ VP VG++IGR GE IK +Q
Sbjct: 64 CEMVMDILRERDQGGF------GDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQ 117
Query: 323 TRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+G RIQ + DG+ E+I + G + E A +I ++L Q++R
Sbjct: 118 NDAGVRIQ-----FKQDDGTGPEKIAHIMGPPDRCEHAARIINDLL-QSLR 162
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 190 DDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
+ P+ ++ K +P+ G +IGK G TI LQ +GA I+ R
Sbjct: 123 NTPNFLEEGEYFLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERV 182
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA--TAQASGAAEQVEIKVPNEKV 307
+ GT ++ I + E + V L T A+Q ++ VPN
Sbjct: 183 CLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTA 242
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
GLIIG+GG T+K + +SGA +QL PEG +ER+V V+G+ Q+ A I
Sbjct: 243 GLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKAVSAI 296
>gi|349802451|gb|AEQ16698.1| putative poly(rC)-binding protein 2 isoform g [Pipa carvalhoi]
Length = 207
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 38/214 (17%)
Query: 193 SSTDDSTMSRK------IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
SS +ST S K + VP ++ G LIGK G I+ ++ ++GA++Q+ D P++
Sbjct: 3 SSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNST 60
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAEADAGG-----------SPSLVARGLATAQ----- 290
R + I G +I + K I V+ E+ G SP + A G T Q
Sbjct: 61 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIP 120
Query: 291 ----ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERI 346
AS E+ +PN+ +G IIGR G I ++ SGA+I++ +GS +R
Sbjct: 121 QPIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV----EGSTDRQ 176
Query: 347 VRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
V +TG I +AQ +I VR S+ +GG
Sbjct: 177 VTITGSTASISLAQYLIN------VRRSSEAGGM 204
>gi|396464595|ref|XP_003836908.1| similar to far upstream element-binding protein 2 [Leptosphaeria
maculans JN3]
gi|312213461|emb|CBX93543.1| similar to far upstream element-binding protein 2 [Leptosphaeria
maculans JN3]
Length = 572
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 19/178 (10%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S I + ++ VG++IG+ G+++R ++ S +IQ ++ P R I G+ S
Sbjct: 213 SEVILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGPQ---RQCRITGSPSARI 269
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ-----------VEIKVPNEKVGL 309
A++ IN +I E GG+P+ A A A Q +I VP+ VGL
Sbjct: 270 SAKREINRIIEEN--GGNPARETGRNARAPAKAVVGQQQPALREGEQSSQIMVPDRTVGL 327
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
IIGRGGETI+ LQ RSG + ++ ++ + R V + G A+E+I E++
Sbjct: 328 IIGRGGETIRDLQERSGCHVNIVGENKSV---NGLRPVNLIGSPAAAAHAKELIMEIV 382
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 24/187 (12%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG + I + RPV +IG+ +
Sbjct: 315 SSQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIV--GENKSVNGLRPVNLIGSPAAAA 372
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE----------------IKVPN 304
A++LI ++ + + A + + + I VP+
Sbjct: 373 HAKELIMEIVDSDTKQMDANNQQQSQQQAPQNARRDNFDAYGGAGAAPAGKINDSILVPS 432
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDMRQIEIAQEMI 363
+ VG+IIG+GGETIK +Q+ +G +I ++ + G+ ER + + G + IE A+ I
Sbjct: 433 DAVGMIIGKGGETIKTMQSDTGCKI-----NVSQASGADIEREIGLVGTRQAIEDAKRAI 487
Query: 364 KEVLSQT 370
E + Q
Sbjct: 488 WEKVDQV 494
>gi|302800040|ref|XP_002981778.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
gi|300150610|gb|EFJ17260.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
Length = 310
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 193 SSTDD---STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
SS++D S S + V N + G +IGK G TI LQ SGA+IQ++R D P R
Sbjct: 26 SSSEDGNGSQSSARFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRV 85
Query: 250 VEIIGTLSNIDKAEKLINAVI---AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEK 306
V + G ++++ A LI + I E D +Q Q+ + VPN
Sbjct: 86 VVLSGAINDVLTALNLILSKIQKETEDD--------------SQTDSKPNQLRLVVPNSV 131
Query: 307 VGLIIGRGGETIKGLQTRSGARIQL--IPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
G IIG+GG TIK S A I+L I Q G +R+V +TG + Q A E+I
Sbjct: 132 CGAIIGKGGGTIKSFIEDSEASIKLSGILQ------GISDRLVTITGSIEQQLKAVELI 184
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 24/202 (11%)
Query: 177 NVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQIT 236
N++ ++ +++D S TD ++ VPN+ G +IGK G TI+ +S A I+++
Sbjct: 100 NLILSKI--QKETEDDSQTDSKPNQLRLVVPNSVCGAIIGKGGGTIKSFIEDSEASIKLS 157
Query: 237 RDADADPHAATRPVEIIGTLSNIDKAEKLI-NAVIAEA---DAGGSP---SLVARGLA-- 287
+ R V I G++ KA +LI ++ ++ D +P +++ L
Sbjct: 158 GILQG---ISDRLVTITGSIEQQLKAVELILTKLLGDSSYLDYAAAPLSYTVICFKLFRL 214
Query: 288 --------TAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEG 339
++ + + VP+E +G I+GRGG+T+ +Q SG I+ I +
Sbjct: 215 APYPVLLPVLESCPVTTSITLAVPDEHIGAIVGRGGKTLGEIQQASGVTIK-ISERGDFV 273
Query: 340 DGSK-ERIVRVTGDMRQIEIAQ 360
G+K R V + G ++IAQ
Sbjct: 274 SGTKNSRKVTLVGTAEGLQIAQ 295
>gi|308495618|ref|XP_003109997.1| hypothetical protein CRE_06433 [Caenorhabditis remanei]
gi|308244834|gb|EFO88786.1| hypothetical protein CRE_06433 [Caenorhabditis remanei]
Length = 476
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+TMS ++VP + VG +IG G +I+ + + KIQ D DP R + ++G S
Sbjct: 247 ATMSLLVKVPRSSVGKIIGVKGQSIKKIMDETKTKIQFM--PDDDPSLMERSLMLMGKTS 304
Query: 258 NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
++ A L+ ++ + QA+ + + +P KVGL+IGRGGE
Sbjct: 305 SVTVAAHLLKQIVDSTNP--------------QANTSVSVFYMSIPTSKVGLVIGRGGEI 350
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI 363
IK + SGA +L + G E+ + G Q+E A+ +I
Sbjct: 351 IKQINAESGAHCELSRE---TGKDPHEKTFVIRGSDVQVEHAKHLI 393
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 26/200 (13%)
Query: 186 NSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAK------------- 232
N S D S ++ S I +P NK G++IGK G+T+R L+ + K
Sbjct: 132 NRYSTDSSHSNISNYKITIPIPANKCGLVIGKGGETMRNLRVSLSKKQNFEINYSLQALS 191
Query: 233 -IQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIA-EADAGGSPSLVARGLATAQ 290
+ D + T+ + I G ++ A+KL+ VIA E D+ +++ G
Sbjct: 192 NCFMLLSQDHNLANNTKSLMITGDQKAVEYAKKLVADVIANEYDSPA--TMIGNG----- 244
Query: 291 ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVT 350
S A + +KVP VG IIG G++IK + + +IQ +P P ER + +
Sbjct: 245 -SLATMSLLVKVPRSSVGKIIGVKGQSIKKIMDETKTKIQFMPDDDP---SLMERSLMLM 300
Query: 351 GDMRQIEIAQEMIKEVLSQT 370
G + +A ++K+++ T
Sbjct: 301 GKTSSVTVAAHLLKQIVDST 320
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 27/182 (14%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IG+ G I + S ++Q+ D P R VEI+GT N++ A+K I+ I+ A
Sbjct: 73 VIGRNGTEIMSISQISQCQLQVIVDL---PINGYRMVEIVGTPENVECAKKCIDETISRA 129
Query: 274 DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR----- 328
+ ++ ++ + ++ I +P K GL+IG+GGET++ L+ +
Sbjct: 130 AVNRYST------DSSHSNISNYKITIPIPANKCGLVIGKGGETMRNLRVSLSKKQNFEI 183
Query: 329 ----------IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV-RPSTLS 377
L+ Q + +K + +TGD + +E A++++ +V++ P+T+
Sbjct: 184 NYSLQALSNCFMLLSQDHNLANNTKS--LMITGDQKAVEYAKKLVADVIANEYDSPATMI 241
Query: 378 GG 379
G
Sbjct: 242 GN 243
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
+ +Q+VD++ +S MS +P +KVG++IG+ G+ I+ + SGA +++R+
Sbjct: 312 LLKQIVDSTNPQANTSVSVFYMS----IPTSKVGLVIGRGGEIIKQINAESGAHCELSRE 367
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLI 266
DPH T + G+ ++ A+ LI
Sbjct: 368 TGKDPHEKTFVIR--GSDVQVEHAKHLI 393
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 26/196 (13%)
Query: 213 VLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
++IGKAG + ++ SGA++ ++ +P R + + G L + KA LI I +
Sbjct: 76 IIIGKAGSHVNEIREKSGARVVVSESIPGNPE---RILNVSGPLDAVSKAFGLIVRRIND 132
Query: 273 ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
+ PS+ A ++ +PN ++G +IG+GG IK +Q SGAR+
Sbjct: 133 -EPFDKPSV---------PGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLNAS 182
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT--VRPSTLSGGFNQQAYRP--- 387
LP GS ER++ V+G I IA I +L + P+T N +YRP
Sbjct: 183 ETMLP---GSTERLLSVSGVADAIHIATYYIGNILIEANERMPTT-----NNSSYRPSSY 234
Query: 388 RVPTGPPQWGPRGSHP 403
+ + PP PRG P
Sbjct: 235 QASSAPPSSTPRGRPP 250
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
+++ D PS ++ K +PN+++G +IGK G I+ +Q SGA++ + P
Sbjct: 130 INDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLNASE--TMLP 187
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEAD 274
+ R + + G I A I ++ EA+
Sbjct: 188 GSTERLLSVSGVADAIHIATYYIGNILIEAN 218
>gi|302842622|ref|XP_002952854.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
gi|300261894|gb|EFJ46104.1| hypothetical protein VOLCADRAFT_121094 [Volvox carteri f.
nagariensis]
Length = 336
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 175 PSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQ 234
P+ P +S D P+ T + K+ V N+ G +IGKAG I LQ +SGA++Q
Sbjct: 19 PNFCFPSVCAGSSSGDLPTGTQQ--VVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQ 76
Query: 235 ITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIA-EADAGGSPSLVARGLATAQASG 293
++R + P + R + + G+L + A LI I+ +A+A S + V RG + +G
Sbjct: 77 LSRAGEFYPGTSDRVLLLSGSLHAVLTAIFLILEKISRDANASASSNGVKRGAKKPEEAG 136
Query: 294 AAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGD 352
A QV++ + GL+IG G+T++ SG+ I++ Q L E S ER + V+G
Sbjct: 137 QA-QVKLALSRRLCGLLIGHKGQTVRDFIGDSGSTIRV--QSLSELTPSDPERTITVSGA 193
Query: 353 MRQIEIAQEMIKEVLSQ 369
Q+ A +I LS
Sbjct: 194 RDQVLRAVALILNTLSM 210
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 27/186 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ + G+LIG G T+R +SG+ I++ ++ P R + + G + +A
Sbjct: 141 KLALSRRLCGLLIGHKGQTVRDFIGDSGSTIRVQSLSELTPSDPERTITVSGARDQVLRA 200
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQ--------------ASGAAEQVEIKVPNEKVG 308
LI ++ + S LAT Q S Q+ + + ++ VG
Sbjct: 201 VALILNTLSMHEGYASYMETTLQLATNQGVVLPPRAASSKNVLSNVRTQLTLYLSDDDVG 260
Query: 309 LIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK------ERIVRVTGDMRQIEIAQEM 362
I+G+ G+ + +Q S I++ D SK ER V ++G+ +++A+ M
Sbjct: 261 AILGKKGQNLIEVQQSSRVTIKI-------SDRSKMDPTTNEREVTISGNYSAVKLAEAM 313
Query: 363 IKEVLS 368
I E LS
Sbjct: 314 IAEKLS 319
>gi|193203009|ref|NP_491627.2| Protein M01A10.1 [Caenorhabditis elegans]
gi|373220094|emb|CCD72087.1| Protein M01A10.1 [Caenorhabditis elegans]
Length = 586
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 35/312 (11%)
Query: 136 EETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSST 195
E+ +++ T FI ++E +VK + + + VE + + ++D P+
Sbjct: 169 EQMRKLRSWTNCDFILIQENNIADSVKPLQITGQPKEVEHAKALVADILDGFDECPPAGM 228
Query: 196 DDST----MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
++ MS +++VP + VG ++G G I+ + + KIQ D DP R +
Sbjct: 229 AGNSPVAAMSLQVKVPRSTVGAIMGLQGSNIKKISNETETKIQFM--PDDDPKLMERTLV 286
Query: 252 IIGTLSNIDKAEKLINAVI-AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLI 310
+IG + + +L+ ++ A ++ +P + L +P K GL+
Sbjct: 287 VIGNKNKVYVCARLLQKIVEANSENANTPISLFYML---------------IPASKCGLV 331
Query: 311 IGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
IGRGGETI+ + SGA ++ P +++ V + G Q+E A+ +I+ V
Sbjct: 332 IGRGGETIRQINKESGAYCEM--SRDPSISAIEKQFV-IRGSETQVEHAKHLIR-VKVGD 387
Query: 371 VRPSTLSGGFNQQAYRP-----RVPTGPPQWG--PRGSHPSQPMAYDYPQRGPYPSQNPH 423
+ P+T N +A +P + PT W P + ++ PQ +P+ +
Sbjct: 388 IPPNT--PYINTRAAQPLQFSHQNPTAIDSWRAQPFTTQHQNSLSLPQPQAHQFPNLMAY 445
Query: 424 YPHLPYGNYPPQ 435
L Y ++PPQ
Sbjct: 446 SARLGYQSHPPQ 457
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 187 SKSDDPSSTDDSTMSRK--IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
+K D D ST K + +P VG++IG+ G I+ + SG ++QI A+P
Sbjct: 37 TKGDIDYRVDTSTTVIKASVSIPEESVGLVIGRNGVEIQAISQKSGCRVQIV----AEPS 92
Query: 245 AA-TRPVEIIGTLSNIDKAEKLINAVIAEADAGGS---PSLVARGLATAQASGAAE-QVE 299
R V+I G NI+ A+KLIN V+A P V + S +++ +
Sbjct: 93 TTGYRSVDIYGISENIEVAKKLINEVVARGRKLSQEPLPCSVPQFQPIPAVSNSSKVTII 152
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
I +P K G IIG+ GE ++ L++ + LI Q D K +++TG +++E A
Sbjct: 153 IPIPANKCGAIIGKKGEQMRKLRSWTNCDFILI-QENNIADSVKP--LQITGQPKEVEHA 209
Query: 360 QEMIKEVL 367
+ ++ ++L
Sbjct: 210 KALVADIL 217
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
+ +P E VGL+IGR G I+ + +SG R+Q++ + P G R V + G IE+A
Sbjct: 56 VSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVAE--PSTTGY--RSVDIYGISENIEVA 111
Query: 360 QEMIKEVLSQ 369
+++I EV+++
Sbjct: 112 KKLINEVVAR 121
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ KVG LIGK G IR+LQ +GA I+I ADA P + R V +I N+++
Sbjct: 331 KLLCHFEKVGSLIGKGGSIIRFLQSETGASIKI---ADAAPDSDER-VVVISARENLEQK 386
Query: 263 -----EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGET 317
+ +I A+ G P GAA + V ++++G ++G+GG
Sbjct: 387 HSPAQDAVIRVHCRIAEIGFEP-------------GAAVVARLLVHSQQIGCLLGKGGII 433
Query: 318 IKGLQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP--- 373
I ++ +GA I++ + +P+ + +V+V G ++ ++ A I + +T+ P
Sbjct: 434 ISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRETIFPLKP 493
Query: 374 --STLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPY 417
S ++G ++ P +P PP + PR P+ P Y P P+
Sbjct: 494 SISNVNGPPYMSSF-PEIP--PPMFRPR-HDPASPGHYSSPVGVPH 535
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 44/203 (21%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I P K G +IGK G IR + ++GAKI+I D +I +++ K+
Sbjct: 59 RILCPATKTGGVIGKGGAIIRQFREDTGAKIRI------DDSVLGCDERVILIVADAVKS 112
Query: 263 EKLINAVI-AEADAG--------GSPSLVA------------------RGLAT------- 288
++ +A+ AEA+ G SP+ VA R L
Sbjct: 113 KREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEK 172
Query: 289 ---AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQ-HLPEGDGSKE 344
A + P+ +VG ++GRGG+ ++ ++ SGA+I+++P+ H+P +
Sbjct: 173 EKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGD 232
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
++++TG + A ++ L
Sbjct: 233 ELIQITGTFPAVRKALLLVSSCL 255
>gi|255085190|ref|XP_002505026.1| predicted protein [Micromonas sp. RCC299]
gi|226520295|gb|ACO66284.1| predicted protein [Micromonas sp. RCC299]
Length = 559
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 14/170 (8%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ P + G +IG GDTI +Q SGA ++I + A P A R ++I G + A
Sbjct: 238 EVMCPASCAGKIIGHGGDTIMSIQKKSGAHVKI-QPAHEVPAGAPRRIDISGAAGPVADA 296
Query: 263 EKLINAVIAEA----DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+++N ++ E+ GGS GA+ ++++ VP E +G +IGRGGETI
Sbjct: 297 LQMVNDILRESAIGGSGGGSGGGGGSRGGGGSGGGASVELDVPVPAEMLGRVIGRGGETI 356
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+ LQ SGARIQ+ E D ++ V + G + A+E++ ++++
Sbjct: 357 RRLQEESGARIQV------ERDANR---VVIRGSADNAQRAKELVLDIVN 397
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
+++ + VP +G +IG+ G+TIR LQ SGA+IQ+ RDA+ V I G+
Sbjct: 332 ASVELDVPVPAEMLGRVIGRGGETIRRLQEESGARIQVERDANR--------VVIRGSAD 383
Query: 258 NIDKAEKLINAVI----AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
N +A++L+ ++ +A A G + R + A G E G IIG+
Sbjct: 384 NAQRAKELVLDIVNTPPGQASASGIKNDFVRHVMPA---GGCE-----------GKIIGK 429
Query: 314 GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
GG++I+ L R+GA+IQ+ + D + V + G Q++ A +++ ++ + +
Sbjct: 430 GGDSIRELCARTGAKIQI------DKDAAT---VTIQGKQEQVDAAIALVQAIIDEGPQI 480
Query: 374 STLSGGFNQQAYRPRVP 390
GG + RP VP
Sbjct: 481 YMRPGGNPGEESRPYVP 497
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQH-LPEGDGSKERIVRVTGDMRQIE 357
E+ P G IIG GG+TI +Q +SGA +++ P H +P G R + ++G +
Sbjct: 238 EVMCPASCAGKIIGHGGDTIMSIQKKSGAHVKIQPAHEVPAG---APRRIDISGAAGPVA 294
Query: 358 IAQEMIKEVLSQT 370
A +M+ ++L ++
Sbjct: 295 DALQMVNDILRES 307
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 20/167 (11%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQI---TRDADADPHAATRPVEIIGTLSNIDKA 262
+PN VG +IG G +IR + SGA I++ +D AD H R V I+GT +A
Sbjct: 450 IPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHE--RKVTIVGTPECQWRA 507
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+ +I + G+P R VEI VP+ +VG IIG+GG+T++ LQ
Sbjct: 508 QSMIFNKVCYEGCMGNPDGTLR-------------VEIFVPSNQVGRIIGKGGQTVRELQ 554
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+ A I+L P+ + ++E V + GD AQ I+ ++++
Sbjct: 555 RLTRALIKL-PEE-SQNANTEETPVHILGDFFSTHAAQRQIRALVNR 599
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 31/175 (17%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I V ++ VG +IG+AG TIR + S A++ + R +A + + + I G N A
Sbjct: 209 RILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAG--SLEKVITIYGNPENCSTA 266
Query: 263 -EKLINAVIAEA---DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+K++ + EA + G P ++I N +G IIG+ G TI
Sbjct: 267 CQKILEVMQQEASNTNRGDVP------------------LKILAHNNLIGRIIGKSGNTI 308
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSK---ERIVRVTGDMRQIEIAQEMIKEVLSQT 370
K + ++ +I + H DGS ER++ + G + A++++ L Q+
Sbjct: 309 KRIMEQTDTKITVSSLH----DGSALHLERVITIKGKPEGVCRAEQLVSAKLRQS 359
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D T+ +I VP+N+VG +IGK G T+R LQ + A I++ ++ + + PV I+G
Sbjct: 525 DGTLRVEIFVPSNQVGRIIGKGGQTVRELQRLTRALIKLPEESQ-NANTEETPVHILGDF 583
Query: 257 SNIDKAEKLINAVI 270
+ A++ I A++
Sbjct: 584 FSTHAAQRQIRALV 597
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
+ S+T+ + KI NN +G +IGK+G+TI+ + + KI ++ D R +
Sbjct: 277 EASNTNRGDVPLKILAHNNLIGRIIGKSGNTIKRIMEQTDTKITVSSLHDGSALHLERVI 336
Query: 251 EIIGTLSNIDKAEKLINAVIAEA 273
I G + +AE+L++A + ++
Sbjct: 337 TIKGKPEGVCRAEQLVSAKLRQS 359
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
+ I V ++ VG IIGR G TI+ + +S AR+ + H E GS E+++ + G+
Sbjct: 208 LRILVLSDMVGAIIGRAGGTIRQITQQSRARVDV---HRKENAGSLEKVITIYGNPENCS 264
Query: 358 IAQEMIKEVLSQ 369
A + I EV+ Q
Sbjct: 265 TACQKILEVMQQ 276
>gi|422294276|gb|EKU21576.1| hypothetical protein NGA_0401010 [Nannochloropsis gaditana CCMP526]
Length = 639
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 12/138 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-TLSNIDKA 262
+++P++ VG++IG+ G+ I+ + +G +Q++++ + P TR V + G T + +A
Sbjct: 188 MKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETE--PGENTRAVSVKGPTKEGVAEA 245
Query: 263 EKLINAVIAEADAGGSP-------SLVARGLATAQAS--GAAEQVEIKVPNEKVGLIIGR 313
++I + EA A S G Q+S G A + + VP++KVGLIIGR
Sbjct: 246 LQMIQGQVDEAQAERSKPRAGTGGGGHYGGGGGGQSSEYGVAATLTVPVPSDKVGLIIGR 305
Query: 314 GGETIKGLQTRSGARIQL 331
GG TI+ +Q R+GA + +
Sbjct: 306 GGSTIRTIQERTGANVNI 323
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 58/211 (27%)
Query: 203 KIEVPN-----NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA-------------DPH 244
KI +P N +LIG G T + LQ N+GA+I I R +D D H
Sbjct: 49 KIFIPKDNPDFNFFSLLIGPRGSTQKRLQENTGARINI-RGSDGSKGEEAPEGEPQEDMH 107
Query: 245 AATRPVEIIGTLSNIDKAEKLINAVIAE-ADAGGSPSLVARGLATAQASGAA-------- 295
V I GT + A+K + ++ + A+A + R LA + +
Sbjct: 108 -----VLIEGTEEQVAAAKKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGG 162
Query: 296 ---------------------EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQ 334
E ++K+P+ VGL+IGRGGE I+ + ++G +Q+ +
Sbjct: 163 GDEGHYGPVRSKPGLGFGAEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKE 222
Query: 335 HLPEGDGSKERIVRVTGDMRQ-IEIAQEMIK 364
P G R V V G ++ + A +MI+
Sbjct: 223 TEP---GENTRAVSVKGPTKEGVAEALQMIQ 250
>gi|221122019|ref|XP_002164819.1| PREDICTED: RNA-binding protein Nova-1-like [Hydra magnipapillata]
Length = 400
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+ST K+ +PN G +IGK G I LQ GAKI+++ + + P R V + G +
Sbjct: 42 ESTPLLKVLIPNYAAGAIIGKGGANIGELQSRYGAKIRLSPNGEFYPGTEERIVILTGDV 101
Query: 257 SN-IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
S ID +I+ V AD+ P +G+ + ++V+I PN GL+IGRGG
Sbjct: 102 SQIIDLHNYIIDKV--HADSMEGP----KGM---RDEDRGQKVKIVCPNATAGLVIGRGG 152
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQ-IEIAQEMIKEV 366
TIK LQ + A+I + + E ERI+ + G+ Q IE ++++I ++
Sbjct: 153 STIKSLQEETKAKIMISGR--DESKVMGERIITIAGNTEQRIEASRQVIGKI 202
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTI-RYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
+T+S ++E+P+ VG ++GK G T+ ++Q+ SGAKIQ + D P R + I G L
Sbjct: 313 TTVSIQMEIPDVLVGAILGKHGKTVHEFIQF-SGAKIQFSAKNDFAPGTTDRILTIQGDL 371
Query: 257 SNIDKAEKLINAVIAEAD 274
+ A LIN I +A+
Sbjct: 372 NQTQIAYFLINQKIMQAE 389
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE 357
+++++P+ VG I+G+ G+T+ SGA+IQ ++ G+ +RI+ + GD+ Q +
Sbjct: 317 IQMEIPDVLVGAILGKHGKTVHEFIQFSGAKIQFSAKN-DFAPGTTDRILTIQGDLNQTQ 375
Query: 358 IAQEMIKEVLSQ 369
IA +I + + Q
Sbjct: 376 IAYFLINQKIMQ 387
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 33/248 (13%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT---LSNIDKA 262
P K+G +IG+ G+ ++ L+ + AKI+I + P R V + + + +D
Sbjct: 53 CPGRKIGSIIGRGGEIVKQLRVETKAKIRI---GETVPGCDERVVTVYSSSDETNTVDDG 109
Query: 263 EKLI----NAVIAEADAGGSPSLVARGLATAQASGAAEQVEIK--VPNEKVGLIIGRGGE 316
+KL+ +A+ D +VA L + Q QV K VP++++G ++G+GG+
Sbjct: 110 DKLVSPAEDALFKIHD-----RVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 317 TIKGLQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT-VRPS 374
++ L++ +GA+I+++ H+P + +V+++GD ++ A I L R
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQ 224
Query: 375 TLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPP 434
L G Y P+G GP P MA P GPY G++PP
Sbjct: 225 HLLGSAVPSVY----PSGGSLMGPTAGPPIVGMA---PLVGPYGGYKSD-----TGDWPP 272
Query: 435 QQM--APR 440
+ M APR
Sbjct: 273 RSMYSAPR 280
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
K+ VP++++G ++GK G ++ L+ +GA+I+I +D D P A R E++
Sbjct: 147 KLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKD-DHVPACALRSDELV 196
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 33/248 (13%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT---LSNIDKA 262
P K+G +IG+ G+ ++ L+ + AKI+I + P R V + + + +D
Sbjct: 53 CPGRKIGSIIGRGGEIVKQLRVETKAKIRI---GETVPGCDERVVTVYSSSDETNTVDDG 109
Query: 263 EKLI----NAVIAEADAGGSPSLVARGLATAQASGAAEQVEIK--VPNEKVGLIIGRGGE 316
+KL+ +A+ D +VA L + Q QV K VP++++G ++G+GG+
Sbjct: 110 DKLVSPAEDALFKIHD-----RVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 317 TIKGLQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT-VRPS 374
++ L++ +GA+I+++ H+P + +V+++GD ++ A I L R
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQ 224
Query: 375 TLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYGNYPP 434
L G Y P+G GP P MA P GPY G++PP
Sbjct: 225 HLLGSAVPSVY----PSGGSLMGPTAGPPIVGMA---PLVGPYGGYKSD-----TGDWPP 272
Query: 435 QQM--APR 440
+ M APR
Sbjct: 273 RSMYSAPR 280
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEII 253
K+ VP++++G ++GK G ++ L+ +GA+I+I +D D P A R E++
Sbjct: 147 KLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKD-DHVPACALRSDELV 196
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 35/230 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI----IGTLSN 258
K+ KVG LIGK G IR LQ +GA I+I ADA P + R V I TL+N
Sbjct: 427 KLLCHFEKVGSLIGKGGSIIRXLQSETGASIKI---ADAAPDSDERVVVISAREACTLTN 483
Query: 259 IDKA-----EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGR 313
++ + +I A+ G P GAA + V ++++G ++G+
Sbjct: 484 XEQKHSPAQDAVIRVHCRIAEIGFEP-------------GAAVVARLLVHSQQIGCLLGK 530
Query: 314 GGETIKGLQTRSGARIQLIP-QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
GG I ++ +GA I++ + +P+ + +V+V G ++ ++ A I + +T+
Sbjct: 531 GGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRETIF 590
Query: 373 P-----STLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPY 417
P S ++G ++ P +P PP + PR P+ P Y P P+
Sbjct: 591 PLKPSISNVNGPPYMSSF-PEIP--PPMFRPR-HDPASPGHYSSPVGVPH 636
>gi|47216835|emb|CAG02726.1| unnamed protein product [Tetraodon nigroviridis]
Length = 457
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT--------------R 248
K+ +P+ G +IGK G TI LQ +GA I++++ D P R
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPAFVMFESPEEKFTEGTTER 67
Query: 249 PVEIIGTLSNIDKAEKLINAVIAEADAGG---SPSLVARGLATAQASGAAEQVEIKVPNE 305
I GT+ ++ I + E P + + T +Q +I VPN
Sbjct: 68 VCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD-RVKQAKIIVPNS 126
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTG----DMRQIEIAQE 361
GLIIG+GG T+K + +SGA +QL PEG +ER+V ++G + + +EI +
Sbjct: 127 TAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTISGEPEQNRKAVEIIVQ 184
Query: 362 MIKE 365
I+E
Sbjct: 185 KIQE 188
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 278 SPSLVARGLATAQ-ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP--Q 334
SP + + LAT + A GA + VEI VP VG I+G+GG+T+ Q +GARIQ+ +
Sbjct: 353 SPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGE 412
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS--QTVRPS 374
+P G++ R V +TG + AQ +I + ++ Q VR +
Sbjct: 413 FIP---GTRNRKVTITGSPAATQAAQYLISQRITYEQGVRAT 451
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP N VG ++GK G T+ Q +GA+IQI++ + P R V I G+ + A
Sbjct: 375 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAA 434
Query: 263 EKLIN 267
+ LI+
Sbjct: 435 QYLIS 439
>gi|397569372|gb|EJK46704.1| hypothetical protein THAOC_34610 [Thalassiosira oceanica]
Length = 507
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 190 DDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
D +S++ ++ K+ V N+ G++IG++G TI LQ S A+I++++ D P + R
Sbjct: 76 DHGTSSNQPYVAIKVLVSNSASGLIIGRSGQTISELQAKSHARIKLSQGGDYYPGTSDRI 135
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSL-VARGLATAQASGAAEQ------VEIKV 302
+ G LS + A +L+ A + E + S V A + S Q + + +
Sbjct: 136 CLVQGALSCVKVAIELVLAKLYELQSLQQVSTQVTEQSADNEPSQQVIQPPPVFIIRVLM 195
Query: 303 PNEKVGLIIGRGGETIKGLQTRSGAR-IQLIPQ--HLPEGDG----SKERIVRVTG 351
P+ G++IGRGG IK L+ +S IQL P+ + G G + ERI+ +TG
Sbjct: 196 PSACCGMVIGRGGSNIKELKEKSRVSFIQLSPKEHEVLVGHGATLSTNERIMTITG 251
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-TLSNIDK 261
++ +P+ ++G ++GK G + +Q ++ KI+I++ D P R V I G T +++
Sbjct: 434 RLGIPDYRIGSILGKGGKILTDIQASTRTKIRISQRGDFIPGTKNRSVTITGQTREDVEA 493
Query: 262 AEKLINAVIAEADA 275
AEK I+ I +++
Sbjct: 494 AEKRIHECIDKSNT 507
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 296 EQV--EIKVPNEKVGLIIGRGGETIKGLQ--TRSGARIQLIPQHLPEGDGSKERIVRVTG 351
EQV + +P+ ++G I+G+GG+ + +Q TR+ RI +P G+K R V +TG
Sbjct: 429 EQVVSRLGIPDYRIGSILGKGGKILTDIQASTRTKIRISQRGDFIP---GTKNRSVTITG 485
Query: 352 DMRQ-IEIAQEMIKEVLSQT 370
R+ +E A++ I E + ++
Sbjct: 486 QTREDVEAAEKRIHECIDKS 505
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 20/193 (10%)
Query: 180 PQQVVDN---SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQIT 236
P+ V+N S S+ ++ ST+ + + ++IGK G + ++ S AK+ ++
Sbjct: 84 PEPAVENGQKSSSNAATAPPASTIHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMVS 143
Query: 237 RDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE 296
+P R + + G L + KA LI I + G PS+ A
Sbjct: 144 ESIPGNPE---RILNVSGALDAVSKAFGLIVRRINDEPMG--PSV---------PGSRAV 189
Query: 297 QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQI 356
++ +P+ ++G +IG+GG IK +Q SGAR+ LP GS ERI+ VTG I
Sbjct: 190 TIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLNASEGMLP---GSTERILSVTGVADAI 246
Query: 357 EIAQEMIKEVLSQ 369
IA I +L Q
Sbjct: 247 HIATYYIGNILIQ 259
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 70/296 (23%)
Query: 140 EVLFSTEEAFIDVKE---ETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSSTD 196
L T++A I + + E+ K V ES+ P N P+++++ S + D S
Sbjct: 110 RCLIVTQDASIIIGKGGSHVNEIREKSNAKVMVSESI-PGN--PERILNVSGALDAVSKA 166
Query: 197 DSTMSRKIE-------------------VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR 237
+ R+I +P++++G +IGK G I+ +Q SGA++ +
Sbjct: 167 FGLIVRRINDEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLNASE 226
Query: 238 DADADPHAATRPVEIIGTLSNIDKAEKLI-NAVIAEADAGGSPSLVAR------------ 284
P + R + + G I A I N +I + +A G+ L R
Sbjct: 227 GML--PGSTERILSVTGVADAIHIATYYIGNILIQQQEAHGAVGLSYRQSRPPRAFNETM 284
Query: 285 -----------------GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGA 327
+ A SG + +I +PN+ VG IIG+GG I ++ S +
Sbjct: 285 GGGAPGQQYFPGQYQSPMMPAAVPSGPLQTQQIYIPNDLVGCIIGKGGAKINEIRQTSQS 344
Query: 328 RIQLI-----------PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
+I+++ Q P +G ER+V +TG I++A M+ L + R
Sbjct: 345 QIKIMEPGAVGVGVGGQQAGPPNEG--ERLVVITGQPHNIQMAVGMLYHRLEEEKR 398
>gi|303282595|ref|XP_003060589.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458060|gb|EEH55358.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 445
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 14/170 (8%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I P G +IG GDTI +Q SGA ++I + P R + I G + A
Sbjct: 124 EIMCPTEAAGKIIGHGGDTINSIQAKSGAHVKIQPSHEVVP-GQPRRITISGVPGAVADA 182
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIK----VPNEKVGLIIGRGGETI 318
+L+N +I E + S + + G + G + +I+ VP E +G +IGRGGETI
Sbjct: 183 AQLVNDIIRETELKHSRASLPGGGGGGHSGGGRDSNQIEMPVPVPTEMIGRVIGRGGETI 242
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
+ LQ SGAR+Q+ E D + V + G + A+E++ ++L+
Sbjct: 243 RRLQEESGARMQV------ERDLGR---VMIKGGADECTRAKELVLDILN 283
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 35/178 (19%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
D + + + VP +G +IG+ G+TIR LQ SGA++Q+ RD V I G
Sbjct: 216 DSNQIEMPVPVPTEMIGRVIGRGGETIRRLQEESGARMQVERDLGR--------VMIKGG 267
Query: 256 LSNIDKAEKLINAVIA----EADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+A++L+ ++ A GG R + A G E G II
Sbjct: 268 ADECTRAKELVLDILNAPPPTAGGGGGGGGTVRHVMPA---GGCE-----------GKII 313
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
G+GG++I+ L R+GA+IQ+ + D + V ++G Q++ A +++ ++ +
Sbjct: 314 GKGGDSIRDLCARTGAKIQI------DKDAAS---VTISGRQDQVDAAIALVQAIIDE 362
>gi|70569708|dbj|BAE06461.1| Ci-FUSE [Ciona intestinalis]
Length = 426
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 28/193 (14%)
Query: 197 DSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTL 256
D I VP VGV+IGK GD I +Q +G ++Q + DP R ++G
Sbjct: 2 DDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRVQFKPE---DPTLPERMCSVMGPK 58
Query: 257 SNIDKAEKLINAVIA---EADAGGSPSLVARGLATAQASGAAEQV--------------- 298
+D A + I+ +I E DAG G +
Sbjct: 59 EGVDAAIRRIHEIIQNVQERDAGNRGGSGGGGGGSGGGHPGGMGGFGQWEGPNMGRGGRG 118
Query: 299 ------EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGD 352
E VP K GL+IG+GG+TIK + +SGA + I ++ P G + + G
Sbjct: 119 MGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAE-IQRNPPPGSDLNYKTFIIKGT 177
Query: 353 MRQIEIAQEMIKE 365
QI++A+++I+E
Sbjct: 178 PEQIKMARQLIQE 190
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP NK G++IGK GDTI+ + SGA +I R+ + I GT I A +L
Sbjct: 128 VPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQIKMARQL 187
Query: 266 INAVIAEADAGGS 278
I + +A GGS
Sbjct: 188 IQEKV-DAGPGGS 199
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+ V N G +IGK G TI Q SGA+IQ++R+ + P R + + G+++ I KA
Sbjct: 38 RFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKA 97
Query: 263 EKLINA-VIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGL 321
+L+ A +++E A + R +V + VP+ G IIG+GG TIK
Sbjct: 98 MELVLAKLLSELHAEEGDDVEPR-----------TKVRLIVPHSSCGAIIGKGGSTIKSF 146
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
S A I++ PQ S +R+V ++G + + A ++I LS+
Sbjct: 147 IEDSQAGIKISPQD-NNYMASTDRLVTLSGTIEEQMRATDLIVSKLSE 193
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 298 VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGD---GSKERIVRVTGDMR 354
+ I V + +GL++GRGG I + SGARI++ + GD G+ +R V +TG R
Sbjct: 248 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDR----GDFMSGTTDRKVTITGSQR 303
Query: 355 QIEIAQEMI 363
I A+ MI
Sbjct: 304 AIRAAESMI 312
>gi|298706779|emb|CBJ29702.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 637
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P++KVG++IGK G TI+ +Q +GA IQI +ADA+ V GT D+A
Sbjct: 328 LTIPDDKVGLVIGKGGGTIKGVQGRTGANIQIPGEADANDRTMRTIVISAGTKDAADRAM 387
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+ +++ ADA A + ++ + + +P++KVGL+IG+GG TIK LQ
Sbjct: 388 AEVQNILS-ADA-------ASVGGGSGVPPGSQVLHVIIPDDKVGLVIGKGGSTIKELQN 439
Query: 324 RSGARIQL 331
R+G RIQ+
Sbjct: 440 RTGCRIQI 447
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 38/215 (17%)
Query: 199 TMSRKIEVP------NNKVGVLIGKAGDTIRYLQYNSGAKIQI-----TRDADADPHA-- 245
T +KI VP N +GVLIG G +++ ++ +GAKI I T++ +DP A
Sbjct: 91 TARKKIMVPVKEHPEFNFMGVLIGPRGSSLKAMEQRTGAKILIRGRGSTKEPSSDPEANE 150
Query: 246 ---------------ATRPVEIIGT---LSNIDKAEKLINAVIAEADAGGSPSLVARGLA 287
AT+ +E I + I K+E+L N +A+ + G+ + G A
Sbjct: 151 DMHVVIEGTDAAVAVATQEIETIFKDPQRALIVKSEQLKN--LADLNGSGAYGGASGGAA 208
Query: 288 TAQASGAAE--QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKER 345
A E +VE+ VP++ VGLIIGRGG I+ +Q IQ+ Q+ D S+ R
Sbjct: 209 GAYGPAGGEEYEVEMGVPSKMVGLIIGRGGSNIQSMQRDYQITIQIASQNDVPAD-SETR 267
Query: 346 IVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
V++ G + +E + I +++ T R + L GGF
Sbjct: 268 PVKLKGGRQSVEQCRSQINQII--TDRENELQGGF 300
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
VP+ VG++IG+ G I+ +Q + IQI D + TRPV++ G ++++
Sbjct: 225 VPSKMVGLIIGRGGSNIQSMQRDYQITIQIASQNDVPADSETRPVKLKGGRQSVEQCRSQ 284
Query: 266 INAVIAEADAGGSPSLV---------ARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
IN +I + + + + S + + +P++KVGL+IG+GG
Sbjct: 285 INQIITDRENELQGGFIPGGVAGGGGGAHYGPGRDSSSQATNHLTIPDDKVGLVIGKGGG 344
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
TIKG+Q R+GA IQ IP D + IV G + A ++ +LS
Sbjct: 345 TIKGVQGRTGANIQ-IPGEADANDRTMRTIVISAGTKDAADRAMAEVQNILS 395
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 42/189 (22%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S SDD + + ++ KI NN +G +IGK G+TI+ + ++ KI ++ D +
Sbjct: 226 SNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL 285
Query: 247 TRPVEIIGTLSNIDKAEKLIN---------------------------AVIAEADAGGS- 278
R + + GT+ N+ KAE +I+ A+++ A G S
Sbjct: 286 ERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSS 345
Query: 279 --PSLVARG---------LATAQ---ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
P L G L T Q AS E + +PN VG IIG G I+ +
Sbjct: 346 RGPGLYGSGPAPYPYQSSLQTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRF 405
Query: 325 SGARIQLIP 333
SGA +++ P
Sbjct: 406 SGASVKIAP 414
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQIT---RDADADPHAATRPVEIIGTLSNIDKA 262
+PNN VG +IG G IR + SGA ++I +D A+ R V I+G+ + KA
Sbjct: 383 IPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTE-RKVTIVGSPESQWKA 441
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAE---QVEIKVPNEKVGLIIGRGGETIK 319
+ LI + E SG + +EI VP+ +VG IIG+GG+ ++
Sbjct: 442 QYLIFEKMREE---------------GYVSGTEDVRLTIEILVPSAQVGRIIGKGGQNVR 486
Query: 320 GLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LQ +G+ I+L Q +E V + G ++ AQ I+ ++ Q
Sbjct: 487 ELQRVTGSVIKLSEQQATPPSADEETTVHIIGPFFSVQSAQRRIRAMVLQ 536
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 25/221 (11%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I V ++ VG +IG+ G TIR + S A++ + R + + + + I G N A
Sbjct: 146 RILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVG--SLEKAITIYGNPDNCTNA 203
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVP----NEKVGLIIGRGGETI 318
K I V+ + +A + G + + GA EI + N +G IIG+GG TI
Sbjct: 204 CKKILEVM-QQEANNTNKGYDEG-SNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTI 261
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSG 378
K + + +I + + + ERI+ V G + + A+ MI L Q+
Sbjct: 262 KRIMQDTDTKITVSSIN-DINSFNLERIITVKGTIENMSKAESMISSKLRQSYEN----- 315
Query: 379 GFNQQAYRPRVPTGPPQWGPRGSHPSQPMA---YDYPQRGP 416
+ QA P+ P G HP M+ Y RGP
Sbjct: 316 --DLQAMAPQSMMFP------GLHPMAMMSTAGMGYSSRGP 348
>gi|307107596|gb|EFN55838.1| hypothetical protein CHLNCDRAFT_52074 [Chlorella variabilis]
Length = 363
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 32/167 (19%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+++P+ VG LIGKAG+TIR LQ ++ +IQ+ A+ D T+ V I
Sbjct: 4 LDIPSAMVGKLIGKAGETIRNLQLSTDTRIQVDHAAEGD----TKRVTI----------- 48
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQV--EIKVPNEKVGLIIGRGGETIKGL 321
+G S VAR A E+ E+ P VG IIGRGGETI+ L
Sbjct: 49 -----------SGMSAEAVARCRAEIATILQDEETKEELDCPAGIVGRIIGRGGETIRAL 97
Query: 322 QTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
Q+ S A I + Q+ PEG + R + V G + A MI+E+++
Sbjct: 98 QSASQAHIT-VDQNFPEG---QPRKIIVQGRPDACQKASMMIRELIN 140
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
V +++ + D +++ P VG +IG+ G+TIR LQ S A I + ++ P
Sbjct: 56 VARCRAEIATILQDEETKEELDCPAGIVGRIIGRGGETIRALQSASQAHITVDQNF---P 112
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVP 303
R + + G KA +I +I + G + +++ R A G + + P
Sbjct: 113 EGQPRKIIVQGRPDACQKASMMIRELI-NGEPGSAQAIIQRVCA---EQGIGKTHVMSCP 168
Query: 304 NEKVGLIIGRGGETIKGLQTRSGARIQL 331
VG IIGR G+TIK LQ +GA IQ+
Sbjct: 169 KGIVGRIIGRQGDTIKQLQRVTGATIQI 196
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ P VG +IG+ GDTI+ LQ +GA IQI D DP T + G S+ D+A+
Sbjct: 165 MSCPKGIVGRIIGRQGDTIKQLQRVTGATIQI--DQSTDPCRVT----LAGQPSSSDQAK 218
Query: 264 KLINAVIA 271
++I +IA
Sbjct: 219 RMIEDIIA 226
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP+NKVG ++G+ G I ++ +GA+I++ AD P + E++ I
Sbjct: 374 STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADK-PKYLSFGDELVQAAGQIH 432
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
E D G PS R +T +E+++PN + I+G GG +
Sbjct: 433 GLE----------DYRGLPSASGRFSST---------IELRIPNSSLESIVGVGGVNLAE 473
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
++ SGAR++L H GS E +V + G + Q + AQ +++ +S R
Sbjct: 474 IRQISGARLRLHEAH----AGSSESVVEIQGTLDQAKAAQSLLEGFISANSR-------- 521
Query: 381 NQQAYRPRVPTGPPQWG 397
QQ++ R+P P+WG
Sbjct: 522 QQQSHSSRMPL-YPRWG 537
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 186 NSKSDD------PSSTDDSTMSR-------KIEVPNNKVGVLIGKAGDTIRYLQYNSGAK 232
+S SDD S DD++MS +I P K+G ++G+ GD ++ L+ + AK
Sbjct: 16 HSNSDDGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAK 75
Query: 233 IQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR-GLATAQA 291
I++ AD+ P A R + I + + ++ I++ P A+ L
Sbjct: 76 IRV---ADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHD 132
Query: 292 SGAAEQV---------------EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQH 335
A+++ I V +VG ++G+GG I+ L++ +GA I+++ ++
Sbjct: 133 KIVADEIYDEVAHDESSDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSEN 192
Query: 336 LPEGDGSKERIVRVTG 351
LP+ + +V+++G
Sbjct: 193 LPQCALQSDELVQISG 208
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 26/150 (17%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNI 259
S +I + +G +IGK+G +R ++ +GA+I++ + D A+ + I+ +
Sbjct: 290 FSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ---EIDKDASGERLIIVSS---- 342
Query: 260 DKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----VEIKVPNEKVGLIIGRGG 315
N + E SP++ A L + S ++E+ + VP+ KVG I+G GG
Sbjct: 343 -------NEIPTEPI---SPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCILGEGG 392
Query: 316 ETIKGLQTRSGARIQLI-----PQHLPEGD 340
+ I ++ R+GA I++ P++L GD
Sbjct: 393 QVITEMRRRTGAEIRVYSKADKPKYLSFGD 422
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S ++ VP++KVG +IG+ G I ++ +GA+I++ AD + LS D
Sbjct: 377 STRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKY-----------LSFDD 425
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
+ + + D S R L+T +E+++PN +G I+G GG +
Sbjct: 426 ELVQAAGQIHGREDYREPTSATGRFLST---------IELRIPNSSLGSIVGAGGVNLAE 476
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
++ SGAR++L H GS E +V + G + Q + AQ +++ +S R
Sbjct: 477 IRQVSGARLRLHEAHA----GSSESVVEIQGTLDQAKAAQSLLQGFISANSRQ------- 525
Query: 381 NQQAYRPRVPTGPPQWG 397
QQ Y R+P P WG
Sbjct: 526 QQQPYSSRMPL-YPSWG 541
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
T+ S +I + +G +IGK+G +R ++ +GA+I++ + D A+ + II
Sbjct: 288 TETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ---EIDKDASGERLIIIS 344
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ----VEIKVPNEKVGLI 310
+ N + AE SP++ A L + S +E+ + VP+ KVG I
Sbjct: 345 S-----------NEIPAEPI---SPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGCI 390
Query: 311 IGRGGETIKGLQTRSGARIQL 331
IG GG+ I ++ R+GA I++
Sbjct: 391 IGEGGKVITDMRRRTGAEIRV 411
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 178 VVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
+V ++ D +D+ S + D +R I V N+VG L+GK G I+ L+ N+GA I++
Sbjct: 134 IVSDEIHDEVANDEKSESADDVTAR-ILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRV 190
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 213 VLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
++IGK G + ++ SGA++ ++ +P R + + G L + KA LI I +
Sbjct: 77 IIIGKGGSHVNEIREKSGARVMVSESIPGNPE---RILNVSGPLDAVSKAFGLIVRRIND 133
Query: 273 ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
+ PS+ A ++ +PN ++G +IG+GG IK +Q SGA++
Sbjct: 134 -EPFDVPSV---------PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNAS 183
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL--SQTVRPSTLSGGFNQQAYRPRVP 390
LP GS ER++ V G I IA I +L +Q PST + YRP
Sbjct: 184 EGMLP---GSTERVLSVAGVADAIHIATYYIGTILIEAQERMPST-----SNSTYRPS-- 233
Query: 391 TGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP-HLPYG--NYPPQQM 437
SQP P +G S P Y H PYG + PPQQ+
Sbjct: 234 -------------SQP---RRPTQGGGSSYVPGYSHHAPYGPPHNPPQQL 267
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 38/221 (17%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
+++ D PS ++ K +PN+++G +IGK G I+ +Q SGAK+ + P
Sbjct: 131 INDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASE--GMLP 188
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADA------------GGSPSLVARGLATAQA 291
+ R + + G I A I ++ EA P +G ++
Sbjct: 189 GSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYV 248
Query: 292 SGAAEQV---------------EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI---- 332
G + +I +PN+ VG IIG+GG I ++ S ++I+++
Sbjct: 249 PGYSHHAPYGPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGA 308
Query: 333 ----PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
P P G ER+V +TG I++A +++ L Q
Sbjct: 309 TGLGPNGAPGGS-EGERLVVITGQPANIQMAVQLLYHRLEQ 348
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 213 VLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
++IGK G + ++ SGA++ ++ +P R + + G L + KA LI I +
Sbjct: 77 IIIGKGGSHVNEIREKSGARVMVSESIPGNPE---RILNVSGPLDAVSKAFGLIVRRIND 133
Query: 273 ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
+ PS+ A ++ +PN ++G +IG+GG IK +Q SGA++
Sbjct: 134 -EPFDVPSV---------PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNAS 183
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL--SQTVRPSTLSGGFNQQAYRPRVP 390
LP GS ER++ V G I IA I +L +Q PST + YRP
Sbjct: 184 EGMLP---GSTERVLSVAGVADAIHIATYYIGTILIEAQERMPST-----SNSTYRPS-- 233
Query: 391 TGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYP-HLPYG--NYPPQQM 437
SQP P +G S P Y H PYG + PPQQ+
Sbjct: 234 -------------SQP---RRPTQGGGSSYVPGYSHHAPYGPPHNPPQQL 267
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 38/221 (17%)
Query: 184 VDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
+++ D PS ++ K +PN+++G +IGK G I+ +Q SGAK+ + P
Sbjct: 131 INDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASE--GMLP 188
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADA------------GGSPSLVARGLATAQA 291
+ R + + G I A I ++ EA P +G ++
Sbjct: 189 GSTERVLSVAGVADAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYV 248
Query: 292 SGAAEQV---------------EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI---- 332
G + +I +PN+ VG IIG+GG I ++ S ++I+++
Sbjct: 249 PGYSHHAPYGPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGA 308
Query: 333 ----PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
P P G ER+V +TG I++A +++ L Q
Sbjct: 309 TGLGPNGAPGGS-EGERLVVITGQPANIQMAVQLLYHRLEQ 348
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 106/274 (38%), Gaps = 72/274 (26%)
Query: 209 NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA-----E 263
+KVG LIGK G +R LQ +GA I+I D D +I +++ E
Sbjct: 353 DKVGSLIGKGGTVVRALQNETGASIKIVDTPDLDERLV-----VISARETLEQTYSPAQE 407
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+I A A+ G P GAA + V +++G ++GRGG I ++
Sbjct: 408 AVIRAHCRIAEIGYEP-------------GAAVVARLLVHGQQIGYLVGRGGHIINDMRR 454
Query: 324 RSGARIQLIPQ-HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+G IQ+ P+ + G + +V+V G++ ++ A I + T P
Sbjct: 455 GTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFP--------- 505
Query: 383 QAYRPRVP--------------TGPPQWGPR------GSHPSQPMAYDYPQRGPYPS--- 419
RP VP T PP + P G +PSQ +R PY S
Sbjct: 506 --MRPHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERPPYHSHPL 563
Query: 420 -QNPHYPHLPYGNYPPQQMAPRSNYGGPPNMQGA 452
P YPH ++GG NM G
Sbjct: 564 DHQPAYPH-------------NVSFGGGNNMDGV 584
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 213 VLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
++IGK G +I+ ++ +G K+ ++ +P R + + G L + KA LI I +
Sbjct: 201 IIIGKGGQSIKEIREKAGVKVLVSESIPNNPE---RILNVSGLLDGVSKAFGLIVRRIND 257
Query: 273 ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
+ PS+ A + VPN ++G IIG+ G IK +Q SGAR+Q
Sbjct: 258 -EPFDVPSV---------PGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDASGARLQAT 307
Query: 333 PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
LP GS ERI+ ++G I IA +L++
Sbjct: 308 ESMLP---GSTERILSISGVADAIHIAVYYTGAILAE 341
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
++ +PNE VG IIG+GG I L+ SGA I+++ + + ER+V V+G I++
Sbjct: 466 QVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGERLVNVSGQPANIQM 525
Query: 359 AQEMIKEVLSQ 369
A +M+ + L Q
Sbjct: 526 AVQMLYQRLEQ 536
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 28/158 (17%)
Query: 138 TKEVLFSTEEAFIDVK---EETKEVTVKEEETVKEEESVEPSNVVPQQVVDNSKSDDPSS 194
T L T++A I + + KE+ K V ES+ P+N P+++++ S D S
Sbjct: 189 TLRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSESI-PNN--PERILNVSGLLDGVS 245
Query: 195 TDDSTMSRKIE--------------------VPNNKVGVLIGKAGDTIRYLQYNSGAKIQ 234
+ R+I VPN+++G +IGK G I+ +Q SGA++Q
Sbjct: 246 KAFGLIVRRINDEPFDVPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQDASGARLQ 305
Query: 235 ITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
T P + R + I G I A A++AE
Sbjct: 306 ATE--SMLPGSTERILSISGVADAIHIAVYYTGAILAE 341
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 106/274 (38%), Gaps = 72/274 (26%)
Query: 209 NKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA-----E 263
+KVG LIGK G +R LQ +GA I+I D D +I +++ E
Sbjct: 353 DKVGSLIGKGGTVVRALQNETGASIKIVDTPDLDERLV-----VISARETLEQTYSPAQE 407
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
+I A A+ G P GAA + V +++G ++GRGG I ++
Sbjct: 408 AVIRAHCRIAEIGYEP-------------GAAVVARLLVHGQQIGYLVGRGGHIINDMRR 454
Query: 324 RSGARIQLIPQ-HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+G IQ+ P+ + G + +V+V G++ ++ A I + T P
Sbjct: 455 GTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFP--------- 505
Query: 383 QAYRPRVP--------------TGPPQWGPR------GSHPSQPMAYDYPQRGPYPS--- 419
RP VP T PP + P G +PSQ +R PY S
Sbjct: 506 --MRPHVPNFNNHPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLRGTERPPYHSHPL 563
Query: 420 -QNPHYPHLPYGNYPPQQMAPRSNYGGPPNMQGA 452
P YPH ++GG NM G
Sbjct: 564 DHQPAYPH-------------NVSFGGGNNMDGV 584
>gi|145355743|ref|XP_001422110.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582350|gb|ABP00427.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 249
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 23/126 (18%)
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDA-DADPHAATRPVEIIGTLSNIDKAEKLIN-- 267
VG +IG+ G+TI+ LQ +SGA + I ++ + +P R + I G + +D A +L+
Sbjct: 2 VGRIIGRGGETIKGLQASSGAHVAIDQNVGEGEP----RKITIAGAAACVDVASELVENL 57
Query: 268 --AVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+P + R I+ P E VG +IGRGGETI+G+QT +
Sbjct: 58 LLGTGVGGGLLVTPGQITR--------------SIECPKESVGKLIGRGGETIRGIQTAT 103
Query: 326 GARIQL 331
GAR+Q+
Sbjct: 104 GARMQI 109
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 200 MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQI 235
++R IE P VG LIG+ G+TIR +Q +GA++QI
Sbjct: 74 ITRSIECPKESVGKLIGRGGETIRGIQTATGARMQI 109
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 18/226 (7%)
Query: 183 VVDNSKSDDPSSTDD----STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
V D +++ P TD+ S ++ + V + + GV+IGKAG + L+ +G K +++
Sbjct: 27 VNDQGEAEAPPKTDEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKV 86
Query: 239 ADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQV 298
R + + G L KA ++ + E G+P + G+ + V
Sbjct: 87 VQG---VHDRVLTVTGPLQGTSKAYSIVAKSLLE----GAPQM---GMGGVVQNNGTHSV 136
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+ + + ++G IIGR G IK +Q SG R+ + LP+ S ERIV V G IE
Sbjct: 137 RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQ---STERIVEVQGTPEGIEK 193
Query: 359 AQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPS 404
A I + L + T + +N A R V +GP Q GS+PS
Sbjct: 194 AIWEIGKCLIDDWQRGTGTVLYN-PAVRASVGSGPGQASAAGSNPS 238
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 185 DNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
DNS+ D+ D ++ ++ N+VG LIG+ G I ++ SG +++I +
Sbjct: 9 DNSQQDELGD-DTICVTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKI----KGNEK 63
Query: 245 AATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPN 304
R V + G+ + + +A + + EAD + GL T + + + + VP
Sbjct: 64 DIERIVSVSGSPAGVTRAIGKVGEFV-EAD-------LNDGL-TGRTTKIPVTLHMIVPT 114
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE-----IA 359
+ G IIG+GG IK ++ ++G +++ + LP S E+++ + G+ R I+ I
Sbjct: 115 GQCGSIIGKGGFRIKEIREKTGCNVKIANELLP---ASTEKLITLYGEPRVIQQCVGSIC 171
Query: 360 QEMIKEVLSQTVRPST 375
Q MI+E + P T
Sbjct: 172 QVMIEEGQERKCTPYT 187
>gi|351698848|gb|EHB01767.1| Far upstream element-binding protein 1 [Heterocephalus glaber]
Length = 637
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ +P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A
Sbjct: 223 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP---DRIAQITGPPDRCQHAA 279
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGR-- 313
++I ++ AG G + G ++ VP K GLIIG+
Sbjct: 280 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGN 339
Query: 314 ---------GGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
GGETIK + +SGARI+L P D ++ + G +QI+ A+++I+
Sbjct: 340 GNNSLLNFLGGETIKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIE 398
Query: 365 EVLSQTVRP 373
E + + P
Sbjct: 399 EKIGGHLYP 407
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 57/205 (27%)
Query: 171 ESVEPSNVVPQQVVDNSK-------SDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
ESV+ + + Q+V+ + D P + ++I +P +K G++IGK G+TI+
Sbjct: 131 ESVQSAKRLLDQIVEKGRPAPGFHHGDGPGNA-----VQEIMIPASKAGLVIGKGGETIK 185
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVA 283
LQ +++ RD R V + GS
Sbjct: 186 QLQQAKEMVLELIRD-----QGGFREVR----------------------NEYGS----- 213
Query: 284 RGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK 343
G E +++ +P VG++IGR GE IK +Q +G RIQ P DG+
Sbjct: 214 -------RIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTT 261
Query: 344 -ERIVRVTGDMRQIEIAQEMIKEVL 367
+RI ++TG + + A E+I ++L
Sbjct: 262 PDRIAQITGPPDRCQHAAEIITDLL 286
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R + GT ++ A++L++ ++ + G P A G G A Q EI +P K
Sbjct: 122 RSCMLTGTPESVQSAKRLLDQIVEK----GRP---APGFHHGDGPGNAVQ-EIMIPASKA 173
Query: 308 GLIIGRGGETIKGLQTRSGARIQLI 332
GL+IG+GGETIK LQ ++LI
Sbjct: 174 GLVIGKGGETIKQLQQAKEMVLELI 198
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-------- 254
++ VP KVG +IG+ GD I+ + + A+I+I D P R V + G
Sbjct: 190 RMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPESSL 246
Query: 255 --TLSNIDKAE-KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
++ + + ++++ + EA PS V+ L VP + G +I
Sbjct: 247 PPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLL--------------VPASQAGSLI 292
Query: 312 GRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+ G T+K +Q S ++++ + LP +R+V V G+ + A E+I L +
Sbjct: 293 GKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKF 352
Query: 371 VRPSTLSGGFNQQAYRP--RVPTGPP---QWGPRGSH 402
+ ++ F Q +P ++ PP WGP H
Sbjct: 353 LVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGH 389
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
V ++VD + + S +S ++ VP ++ G LIGK G T++ +Q S +++
Sbjct: 256 VHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGS 315
Query: 239 ADADPHAA--TRPVEIIGTLSNIDKAEKLI 266
D A R VE++G +++ +A +LI
Sbjct: 316 EDLPVFALQDDRVVEVVGEPTSVHRALELI 345
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG-------- 254
++ VP KVG +IG+ GD I+ + + A+I+I D P R V + G
Sbjct: 190 RMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPESSL 246
Query: 255 --TLSNIDKAE-KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
++ + + ++++ + EA PS V+ L VP + G +I
Sbjct: 247 PPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLL--------------VPASQAGSLI 292
Query: 312 GRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQT 370
G+ G T+K +Q S ++++ + LP +R+V V G+ + A E+I L +
Sbjct: 293 GKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKF 352
Query: 371 VRPSTLSGGFNQQAYRP--RVPTGPP---QWGPRGSH 402
+ ++ F Q +P ++ PP WGP H
Sbjct: 353 LVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGH 389
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 179 VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRD 238
V ++VD + + S +S ++ VP ++ G LIGK G T++ +Q S +++
Sbjct: 256 VHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGS 315
Query: 239 ADADPHAA--TRPVEIIGTLSNIDKAEKLI 266
D A R VE++G +++ +A +LI
Sbjct: 316 EDLPVFALQDDRVVEVVGEPTSVHRALELI 345
>gi|326433287|gb|EGD78857.1| hypothetical protein PTSG_01835 [Salpingoeca sp. ATCC 50818]
Length = 507
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 48/193 (24%)
Query: 192 PSSTDDST--MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
PS+ D T M K N + G+LIG+ G TI+ LQ ++ + I+I+ +++ P A R
Sbjct: 50 PSAARDDTEQMHIKFLATNGQCGMLIGRGGATIKDLQDSTHSYIKISHNSELYPGTADRL 109
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE------------- 296
V + + + L+NA++A + AR Q +G+
Sbjct: 110 VSVQA------RPQHLLNALLAILECAN-----ARSDPQQQGAGSTTPGTPQNSNHQQAQ 158
Query: 297 -------------------QVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQH-L 336
V++ +P GLI+GRGGETI+ +QT A I + +H +
Sbjct: 159 DQAQDQVQQQQQQQGPRSISVKLVIPVVAAGLILGRGGETIRTMQTECDAYIHMSQRHEV 218
Query: 337 PEGDGSKERIVRV 349
P +ERIV +
Sbjct: 219 PP--ALQERIVTI 229
>gi|159162537|pdb|1J4W|A Chain A, Complex Of The Kh3 And Kh4 Domains Of Fbp With A
Single_stranded 29mer Dna Oligonucleotide From The Fuse
Element Of The C-Myc Oncogene
Length = 174
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P VG++IG+ G+ I+ +Q ++G +IQ D P R +I G A ++
Sbjct: 9 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRAQHAAEI 65
Query: 266 INAVIAEADAGGSPSLVARGLATAQAS--------GAAEQVEIKVPNEKVGLIIGRGGET 317
I ++ AG G + G ++ VP K GLIIG+GGET
Sbjct: 66 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGET 125
Query: 318 IKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
IK + +SGARI+L P D ++ + G +QI+ A+++I+E
Sbjct: 126 IKSISQQSGARIELQRNPPPNAD-PNMKLFTIRGTPQQIDYARQLIEE 172
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 295 AEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSK-ERIVRVTGDM 353
+ +++ +P VG++IGR GE IK +Q +G RIQ P DG+ ERI ++TG
Sbjct: 2 SHMIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPD-----DGTTPERIAQITGPP 56
Query: 354 RQIEIAQEMIKEVL 367
+ + A E+I ++L
Sbjct: 57 DRAQHAAEIITDLL 70
>gi|260811882|ref|XP_002600650.1| hypothetical protein BRAFLDRAFT_130041 [Branchiostoma floridae]
gi|229285939|gb|EEN56662.1| hypothetical protein BRAFLDRAFT_130041 [Branchiostoma floridae]
Length = 629
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHA---ATRPVEIIGTLSNID 260
+ VP VG LIG G IR + A I+I A AD A A R V I G+
Sbjct: 453 LWVPGGVVGALIGPGGQNIRLASRQANATIKI---APADQSAQGQAERKVSITGSPDAQW 509
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
K + + + + + GS +V R EI VP+ VG IIG+ G +++G
Sbjct: 510 KVQYWVFSKVGQEGYAGSDVVVLRA-------------EIPVPSNMVGRIIGKRGASVQG 556
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLS 368
LQ + ARI+ +P++ +GD + E V + G+ ++ AQ I++++S
Sbjct: 557 LQKNTSARIE-VPRN-KQGDENGEVPVTIVGNFYSVQSAQRQIRKLVS 602
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 164 EETVKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIR 223
E K E ++ +V Q D+ SD PSS D + K+ N+ VG LIG+ G T++
Sbjct: 261 EACRKIVEIMQQESVATGQSTDDETSDPPSSED---VPLKLLAHNSLVGRLIGRNGTTLK 317
Query: 224 YLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI 266
+ +SGA+I I+ + + R + I+GTL + KAEKLI
Sbjct: 318 KIMQDSGARITISNFQELTLYNMERTITILGTLDDQCKAEKLI 360
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
+D + +I VP+N VG +IGK G +++ LQ N+ A+I++ R+ D + PV I+G
Sbjct: 527 SDVVVLRAEIPVPSNMVGRIIGKRGASVQGLQKNTSARIEVPRNKQGDENGEV-PVTIVG 585
Query: 255 TLSNIDKAEKLINAVIA 271
++ A++ I +++
Sbjct: 586 NFYSVQSAQRQIRKLVS 602
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQIT---RDADADPHAATRP 249
S T ++T + +PNN VG +IG G IR + SGA ++I +D A+ R
Sbjct: 361 SDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTE-RK 416
Query: 250 VEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGL 309
V IIG+ + KA+ LI + E A +EI VP+ +VG
Sbjct: 417 VTIIGSPESQWKAQYLIFEKMREEGY------------VAGTEDVRLTIEILVPSTQVGR 464
Query: 310 IIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
IIG+GG+ ++ LQ +G+ I+L Q +E V + G ++ AQ I+ ++ Q
Sbjct: 465 IIGKGGQNVRELQRVTGSVIKLSEQQATPPSAEEETTVHIIGPFFSVQSAQRRIRAMVLQ 524
Query: 370 TVRPSTLSG 378
+ P SG
Sbjct: 525 SGTPGGTSG 533
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 42/185 (22%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
+ +ST+ ++ KI NN +G +IGK G+TI+ + ++ +KI ++ D + R +
Sbjct: 218 EAASTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLERII 277
Query: 251 EIIGTLSNIDKAEKLIN---------------------------AVIAEADAGGS---PS 280
+ GT+ N+ KAE +I+ A+++ A G S P
Sbjct: 278 TVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPG 337
Query: 281 LVARG---------LATAQ---ASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
L G L T Q AS E + +PN VG IIG G I+ + SGA
Sbjct: 338 LYGSGPAPYPYQSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGAS 397
Query: 329 IQLIP 333
+++ P
Sbjct: 398 VKIAP 402
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 37/245 (15%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I V ++ VG +IG+ G TIR + S A++ + R + + + + I G N A
Sbjct: 150 RILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVG--SLEKAITIYGNPENCTNA 207
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
K I V+ + A + + ++I N +G IIG+GG TIK +
Sbjct: 208 CKKILDVMQQEAASTNKGEIT--------------LKILAHNNLIGRIIGKGGNTIKRIM 253
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQ 382
+ ++I + + + ERI+ V G + + A+ MI L Q+ +
Sbjct: 254 QDTDSKITVSSIN-DINSFNLERIITVKGTIENMSKAESMISSKLRQSYEN-------DL 305
Query: 383 QAYRPRVPTGPPQWGPRGSHPSQPMA---YDYPQRGP--YPSQNPHYPHLPYGNYPPQQM 437
QA P+ P G HP M+ Y RGP Y S YP+ + P QQ
Sbjct: 306 QAMAPQSMMFP------GLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPY--QSSLPTQQG 357
Query: 438 APRSN 442
P S+
Sbjct: 358 VPASD 362
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 9/190 (4%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
+I VP +KVG +IG+ G+ I+ + S A+I+I D P R V I ++
Sbjct: 117 RILVPVHKVGAIIGRKGEFIKRMCEESKARIKIL---DGPPGVPERAVMISAKDEPDEQI 173
Query: 263 EKLINAV--IAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKG 320
++ + I + A GS + T + +G + VP + G +IG+ G TIK
Sbjct: 174 SPAMDGLLRIHKRIADGSDGEFGQ---TQRGTGTMGPTRLLVPASQAGSLIGKQGATIKS 230
Query: 321 LQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGF 380
+Q S A ++++ +++P + +R+V + G+ ++ A E+I L + + ++ F
Sbjct: 231 IQDSSKAVVRIV-ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVLPLF 289
Query: 381 NQQAYRPRVP 390
QQ +P
Sbjct: 290 EQQMKMHSMP 299
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
T+ + + ++IGK G I ++ SGA+ I+ +A P A R + + G L
Sbjct: 105 TIQMRALIVTQDASIIIGKGGRHINEVREKSGARATIS---EAVPGNAERILSVAGPLDA 161
Query: 259 IDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETI 318
+ KA LI I + + PS+ A + VPN ++G +IG+ G I
Sbjct: 162 VSKAFGLIVRRIND-EPFDVPSV---------PGSRAVTIRFIVPNSRMGSVIGKAGSKI 211
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
K +Q SGAR+Q LP GS ER++ ++G + IA + +L
Sbjct: 212 KEIQDMSGARVQASEALLP---GSTERVLSISGVADAVHIAVYYVGMIL 257
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 113/272 (41%), Gaps = 39/272 (14%)
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEI 252
S D R + +P+ G +IG+ G TIR L+ A I I A P +
Sbjct: 90 SQPSDKIWCRFL-IPSKVAGAIIGRGGATIRALREEYQAIINIPE--------ARAPERV 140
Query: 253 IGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
+ N + I + IAE + A+G + ++ I V + + G IIG
Sbjct: 141 LKICVNSRETLHTIVSQIAEILKNEN----AKGSHNGRRKEGETELRILVQSSQAGAIIG 196
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVR 372
G T+K L+ +G+RI + P+ P S ER+ + G + MI ++L +
Sbjct: 197 TKGSTVKNLRETTGSRININPECCP---NSSERVAAIMGPPATVVKCISMIYDILER--- 250
Query: 373 PSTLSGGFNQQAYRPRV--PT---GPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHL 427
+ N+Q Y P + PT G + R S+ Q + Y P PYP P+ +
Sbjct: 251 ---VPAKGNEQRYDPNMFDPTYDYGGYGFDMRHSN-EQFIPYSRP---PYPYGMPNERFM 303
Query: 428 ----PYGNYP---PQQMAPRSNYGGPPNMQGA 452
PYGN P PQ + GPP QGA
Sbjct: 304 HQPGPYGNSPPFYPQNFVNPGRFAGPPQ-QGA 334
>gi|323450832|gb|EGB06711.1| hypothetical protein AURANDRAFT_16756, partial [Aureococcus
anophagefferens]
Length = 107
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 27/123 (21%)
Query: 215 IGKAGDTIRYLQYNSGAKIQITRDAD-ADPHAA----TRPVEIIGTLSNIDKAEKLINAV 269
IGK G+TI+ LQY G ++QI D + DP+ A TR + + GT ID+A++ ++ +
Sbjct: 1 IGKGGETIKRLQYECGVRVQIASDPEPKDPNDARAVETRRIAMTGTPEGIDRAKRDLDDM 60
Query: 270 IAEADAGGSPSLVARGLATAQASGAAE------QVEIKVPNEKVGLIIGRGGETIKGLQT 323
L T Q S A+ V++ V N+KVGLIIGR G TIKG+Q
Sbjct: 61 ----------------LRTRQNSSASNPANAAVAVDLVVANDKVGLIIGRQGSTIKGIQE 104
Query: 324 RSG 326
RSG
Sbjct: 105 RSG 107
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS----- 257
++ VP KVG +IG+ GD I+ + + A+I+I D P R V + G
Sbjct: 181 RMLVPAQKVGSIIGRKGDVIKKIVEETRARIKIL---DGPPGTTERAVMVSGKEEPESSL 237
Query: 258 --NIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAE-QVEIKVPNEKVGLIIGRG 314
++D ++ ++ D G PS QA A++ + VP + G +IG+
Sbjct: 238 PPSMDGLLRVHMRIVDGLD--GEPS---------QAPPASKVSTRLLVPASQAGSLIGKQ 286
Query: 315 GETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRP 373
G T+K +Q S ++++ + LP +R+V V G+ + A E+I L + +
Sbjct: 287 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVD 346
Query: 374 STLSGGFNQQAYRP-----RVPTGPPQWGPRGSH 402
++ F Q +P +P WGP H
Sbjct: 347 RSIIPFFENQMQKPTRQMDHMPAPHQAWGPPQGH 380
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 90 DEVVDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASVDNQQISVKEETKEVLFSTEEAF 149
D+V D E ++E K E E A V E+ + + ++ ++ +
Sbjct: 141 DKVEDEEGISESLQKSESEEGATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVI 200
Query: 150 IDVKEETK-EVTVKE------EETVKEEESVEPSNVVP----------QQVVDNSKSDDP 192
+ EET+ + + + E V EP + +P ++VD +
Sbjct: 201 KKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEPS 260
Query: 193 SSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA--TRPV 250
+ S +S ++ VP ++ G LIGK G T++ +Q S +++ D A R V
Sbjct: 261 QAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVV 320
Query: 251 EIIGTLSNIDKAEKLI 266
E++G +++ KA +LI
Sbjct: 321 EVVGEPTSVHKALELI 336
>gi|116205595|ref|XP_001228608.1| hypothetical protein CHGG_10681 [Chaetomium globosum CBS 148.51]
gi|88176809|gb|EAQ84277.1| hypothetical protein CHGG_10681 [Chaetomium globosum CBS 148.51]
Length = 488
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 201 SRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNID 260
S +I VP+ VG++IG+ G+TIR LQ SG I A +A
Sbjct: 248 SLQIMVPDRTVGLIIGRGGETIRDLQERSGCHITSLARTRASTASA-------------- 293
Query: 261 KAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVE--IKVPNEKVGLIIGRGGETI 318
++ N A A GG GA ++V I VP++ VG+IIG+GGETI
Sbjct: 294 RSTDSRNGNNAGAARGGRADSY-----GGGGGGAPDKVNDSIYVPSDAVGMIIGKGGETI 348
Query: 319 KGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+ +Q +G +I + G G ER + + G I A+ I++ +
Sbjct: 349 REMQNMTGCKINV---SQSSGPGEVEREIGLVGSRDAIAQAKRAIEDKV 394
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 296 EQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI 332
+ ++I VP+ VGLIIGRGGETI+ LQ RSG I +
Sbjct: 247 DSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHITSL 283
>gi|328851244|gb|EGG00400.1| hypothetical protein MELLADRAFT_39696 [Melampsora larici-populina
98AG31]
Length = 420
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
T T+ + + ++IGK G I ++ SGA+ I+ +A P A R + + G
Sbjct: 85 TATQTIQMRALIVTQDASIIIGKGGRHINEIREKSGARATIS---EAVPGNAERILSVGG 141
Query: 255 TLSNIDKAEKLINAVIAE--ADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIG 312
L + KA LI I + D P A + VPN ++G +IG
Sbjct: 142 PLDAVSKAFGLIVRRINDEPFDVPSVPG------------SRAVTIRFVVPNSRMGSVIG 189
Query: 313 RGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+ G IK +Q SGAR+Q LP GS ER++ V+G + IA + +L
Sbjct: 190 KAGSKIKEIQDMSGARVQASEAMLP---GSTERVLSVSGVADAVHIAVYYVGMIL 241
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PNE VG +IG+GG+ I ++ S I+++ P + + ER+V +TG QI+
Sbjct: 344 QIYIPNELVGAVIGKGGQKINEIRQASATHIKIMEPGEGGQAASTNERLVTITGQPLQIQ 403
Query: 358 IAQEMIKEVL 367
+A +++ + L
Sbjct: 404 MAVQLLYQRL 413
>gi|422294650|gb|EKU21950.1| far upstream binding protein [Nannochloropsis gaditana CCMP526]
Length = 290
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDA-DADPHAATRPVEIIGTLSNIDKA 262
++V + VG +IGK G+TIR +Q SG + I + D +P R + I+G ++ A
Sbjct: 123 MDVAKDVVGRIIGKGGETIRDIQTRSGCQCVIDQSVPDGEP----RKLTIVGKPEHVKNA 178
Query: 263 EKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQ 322
+I V+ G PS++A A S A + P VG +IG+GG+ ++ +Q
Sbjct: 179 RAMIEGVME-----GGPSVLADFPEVAGNSKAT----VDCPRGLVGRLIGKGGDIVREIQ 229
Query: 323 TRSGARIQLIPQHLPEGDGSKERIVRVTG 351
+S A IQ I Q LP+ K V +TG
Sbjct: 230 YKSKAVIQ-INQSLPQDQPCK---VTITG 254
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 300 IKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIA 359
+ V + VG IIG+GGETI+ +QTRSG + +I Q +P+G+ K IV G ++ A
Sbjct: 123 MDVAKDVVGRIIGKGGETIRDIQTRSGCQC-VIDQSVPDGEPRKLTIV---GKPEHVKNA 178
Query: 360 QEMIKEVL 367
+ MI+ V+
Sbjct: 179 RAMIEGVM 186
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 188 KSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAAT 247
K DP + + + + + ++IGKAG + ++ SGA++ ++ +P
Sbjct: 57 KDSDPPAPPAAQIHMRCLIVTQDASIIIGKAGKHVNEIREKSGARVMVSESIPGNPE--- 113
Query: 248 RPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKV 307
R + + G L + K+ LI I + + +PS+ A ++ +P+ ++
Sbjct: 114 RILNVSGPLDAVSKSFGLIVRRIND-EPFDTPSV---------PGSRAVTIKFIIPHSRM 163
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
G +IGRGG IK +Q SGA++ LP GS ERI+ V+G I IA + +L
Sbjct: 164 GSVIGRGGSKIKEIQDASGAKLNASEGMLP---GSTERILSVSGVADAIHIATYYVGNIL 220
Query: 368 SQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPR 399
+ S + YR P+G GPR
Sbjct: 221 IEAAERQPHSS--STSTYR---PSGTSSRGPR 247
>gi|392595587|gb|EIW84910.1| hypothetical protein CONPUDRAFT_117160 [Coniophora puteana
RWD-64-598 SS2]
Length = 378
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 20/183 (10%)
Query: 187 SKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAA 246
S S +P++ + + + + ++IGK G + ++ SGA++ ++ +P
Sbjct: 45 SASTNPNAPASAMIHMRCLIVTQDASIIIGKGGTHVNEIREKSGARVVVSESIPGNPE-- 102
Query: 247 TRPVEIIGTLSNIDKAEKLINAVIAE--ADAGGSPSLVARGLATAQASGAAEQVEIKVPN 304
R + + G L + KA LI I + D P A ++ +PN
Sbjct: 103 -RILNVSGPLDAVSKAFGLIVRRINDEPFDVPSVPG------------SRAVTIKFMIPN 149
Query: 305 EKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIK 364
++G +IG+ G IK +Q SGAR+ LP GS ER++ V G I IA I
Sbjct: 150 SRMGSVIGKQGSKIKEIQDASGARLNASEGMLP---GSTERVLSVAGVADAIHIATYYIG 206
Query: 365 EVL 367
+L
Sbjct: 207 NIL 209
Score = 39.3 bits (90), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEG--------DGSKERIVRV 349
+I +PN+ VG IIG+GG I ++ S ++I+++ P + G G ER+V +
Sbjct: 288 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPSGGEGERLVVI 347
Query: 350 TGDMRQIEIAQEMIKEVLSQ 369
TG I++A +++ L Q
Sbjct: 348 TGQPANIQMAVQLLYHRLEQ 367
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D S T + +S + + + ++IGK+G I ++ S A++ I+ +P R +
Sbjct: 538 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPE---RIL 594
Query: 251 EIIGTLSNIDKAEKLINAVIAE-----ADAGGSPSLVARGLATAQASGAAEQVEIKVPNE 305
+ G L + KA LI I + A GS S+ R + VPN
Sbjct: 595 TVSGPLDAVSKAFGLIVRRINDEPFDLASVPGSKSVTIRFI---------------VPNS 639
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
++G +IG+ G IK +Q SGAR+ LP GS ER++ ++G + IA +
Sbjct: 640 RMGSVIGKQGSKIKEIQEASGARLTAGEAMLP---GSTERVLSISGVADAVHIAVYYVGS 696
Query: 366 VL 367
+L
Sbjct: 697 IL 698
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 48/215 (22%)
Query: 199 TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSN 258
+++ + VPN+++G +IGK G I+ +Q SGA+ +T P + R + I G
Sbjct: 629 SVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGAR--LTAGEAMLPGSTERVLSISGVADA 686
Query: 259 IDKAEKLINAVIAEA------------DAGGSPSLVARGLATAQASGAAEQ--------- 297
+ A + +++ E AGG PS A G A A A +Q
Sbjct: 687 VHIAVYYVGSILLEHPDRNANNLPYRPTAGG-PSTRA-GAAGANPYAAPQQPFGYGAPAA 744
Query: 298 ---------------------VEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI--PQ 334
+I +PN+ VG IIG+GG I +++ S + I+++
Sbjct: 745 GFGGAPAGAGGAPQLPPGSQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGA 804
Query: 335 HLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQ 369
+ G ER+V +TG I++A ++ + L Q
Sbjct: 805 GIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLEQ 839
>gi|393236643|gb|EJD44191.1| eukaryotic type KH-domain (KH-domain type I) [Auricularia delicata
TFB-10046 SS5]
Length = 450
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 22/198 (11%)
Query: 192 PSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVE 251
P++ + + + + ++IGK G + ++ SGA++ ++ +P R +
Sbjct: 89 PTAPTGAMIHMRCLIVTQDASIIIGKGGAHVNEIREKSGARVVVSESIPGNPE---RILN 145
Query: 252 IIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLII 311
+ G L + KA LI I + + PS+ A ++ +PN ++G +I
Sbjct: 146 VSGPLDAVSKAFGLIVRRIND-EPFDVPSV---------PGSRAVTIKFMIPNSRMGSVI 195
Query: 312 GRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTV 371
G+GG IK +Q SGAR+ LP GS ER++ V G I IA I +L +
Sbjct: 196 GKGGVKIKEIQEASGARLNASEGVLP---GSTERVLSVAGVADAIHIATYYIGNILLE-- 250
Query: 372 RPSTLSGG--FNQQAYRP 387
+ GG N +YRP
Sbjct: 251 --AQAHGGPHSNHASYRP 266
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP--EGDGSKERIVRVTGDMRQI 356
+I +PN+ VG IIG+GG I ++ S + I+++ + G G ER+V +TG I
Sbjct: 366 QIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNI 425
Query: 357 EIAQEMIKEVLSQTVRPSTLSGG 379
++A ++ + L Q + + GG
Sbjct: 426 QMAVSLLYQRLEQEKQKQMMQGG 448
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 140/319 (43%), Gaps = 51/319 (15%)
Query: 118 HSSVEEQASVDNQQISVKEETKEVL----FSTEEAFIDVKEETKEVTVKEEETVKEEESV 173
+SS ++ ++D++Q+ ++++ +E+ T + ++ E++E E+ + +E++
Sbjct: 63 NSSSIKRIALDSEQLDLQDKEEELQQTAPIITNNSTSHLETESEEFDKPNEDANQTQETL 122
Query: 174 EPSNVVPQQ----------------VVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGK 217
EP+ V P+ V ++ DDP+ + ++ P + ++G+
Sbjct: 123 EPAYVPPESDHADEQNTASSSSSKPVSNHRDRDDPT-----FIQLRMYCPVKEASTIVGR 177
Query: 218 AGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGG 277
G+TI +L+ + +I ++ + P R V + G N+ +A LI VI E
Sbjct: 178 KGETINHLREKANVRITVSENLKGVPE---RIVAVKGPAENVARAFGLITRVILEEPEDE 234
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
S+ ++ +++ +P+ +G IIG+ G + ++ S A+++ LP
Sbjct: 235 PASITSQQY----------NLKLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENPLP 284
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVL--SQTVRPSTLSGGFNQQAYRPRVPTGPPQ 395
S +R++ V G I IA I +V+ + V +N Y+ PT
Sbjct: 285 Y---STDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNKVVLYNPANYQ---PTDHQN 338
Query: 396 WGPRGSHP-----SQPMAY 409
G R HP + PM Y
Sbjct: 339 LGGRQRHPPNNSYNNPMGY 357
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 191 DPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPV 250
D S T + +S + + + ++IGK+G I ++ S A++ I+ +P R +
Sbjct: 104 DSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPE---RIL 160
Query: 251 EIIGTLSNIDKAEKLINAVIAEA-----DAGGSPSLVARGLATAQASGAAEQVEIKVPNE 305
+ G L + KA LI I + GS S+ R + VPN
Sbjct: 161 TVSGPLDAVSKAFGLIVRRINDEPFDQPSVPGSKSVTIRFI---------------VPNS 205
Query: 306 KVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKE 365
++G +IG+ G IK +Q SGAR+ LP GS ER++ ++G + IA +
Sbjct: 206 RMGSVIGKQGSKIKEIQEASGARLTAGEAMLP---GSTERVLSISGVADAVHIAVYYVGT 262
Query: 366 VL 367
+L
Sbjct: 263 IL 264
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI--PQHLPEGDGSKERIVRVTGDMRQI 356
+I +PN+ VG IIG+GG I +++ S + I+++ + G ER+V +TG I
Sbjct: 333 QIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNI 392
Query: 357 EIAQEMIKEVLSQ 369
++A ++ + L Q
Sbjct: 393 QMAVSLLYQRLEQ 405
>gi|354542879|emb|CCE39597.1| hypothetical protein CPAR2_600100 [Candida parapsilosis]
Length = 607
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 195 TDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
+D S +S ++ P + ++GK G I +L+ + KIQI+ + P R + + G
Sbjct: 207 SDPSYVSFRMYCPVKEASTVVGKGGAKINHLREKAQVKIQISENLKDVPE---RIITVKG 263
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
T N+ KA LI I G P L + Q + +++ +PN +G IIG+
Sbjct: 264 TAENVAKAFGLIVRTIL-----GEPEDEPANLNSQQYN-----LKLLIPNVIIGHIIGKQ 313
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
G + ++ S A+++ LP S +R++ V G I IA I EV+
Sbjct: 314 GLKFREIEENSAAKLKAAESPLPH---STDRVLSVLGVADAIHIAVYFIGEVV 363
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 190 DDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRP 249
D+P++ + + K+ +PN +G +IGK G R ++ NS AK++ PH+ R
Sbjct: 285 DEPANLNSQQYNLKLLIPNVIIGHIIGKQGLKFREIEENSAAKLKAAE--SPLPHSTDRV 342
Query: 250 VEIIGTLSNIDKAEKLINAVIAE 272
+ ++G I A I V+ E
Sbjct: 343 LSVLGVADAIHIAVYFIGEVVIE 365
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 26/209 (12%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT------L 256
+I VP KVG +IG+ G+ I+ + + A+I+I D P R V I L
Sbjct: 234 RILVPAQKVGAIIGRKGEFIKKMCEETKARIKIL---DGPPGVPERAVMISAKDEPDAPL 290
Query: 257 SNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGE 316
S ++ I ++ G S +++G + VP+ + G +IG+ G
Sbjct: 291 SPAMDGLLRVHKRITDSSDGESSQ-------PQRSAGNIGPTRLLVPSSQAGSLIGKQGA 343
Query: 317 TIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMI-----KEVLSQTV 371
TIK +Q S + ++++ +++P + +R+V + G+ ++ A E+I K ++ ++V
Sbjct: 344 TIKSIQDSSKSIVRIV-ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSV 402
Query: 372 RPSTLSGGFNQQAYRPRV-PTGPPQ-WGP 398
P L + PR P PPQ WGP
Sbjct: 403 LP--LFEAHMKMHGMPREQPVPPPQHWGP 429
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 109 ESAEVKTEQHSSVEEQA---SVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEE 165
E A+ E ++ EE+A S D + E E ++EA + VK+E +E++
Sbjct: 25 EQADASIEGQANPEEEAEKPSADEEPKGTNNEESE--NPSDEAQVTVKDEDMGDQNREDQ 82
Query: 166 TVKEEESVEPSNV---------VPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIG 216
+ E EP+NV + V +++K P +S ++ V KVG LIG
Sbjct: 83 AIGSLE--EPANVDGGEAEADQLANVVAEDTKW--PGWPGESVF--RVLVSTQKVGALIG 136
Query: 217 KAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI---NAVIAEA 273
+ G+ I+ + S A+I+I D P R V I S D+ + L+ V+
Sbjct: 137 RKGEFIKRMCDESKARIKIL---DGPPGVPERAVMI----SAKDEPDALVPPAIDVLLRV 189
Query: 274 DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
+ L + + + A + VP + G +IG+ G TIK +Q S ++++
Sbjct: 190 HNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIKSIQDASKCALRIL- 248
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQ 383
+++P + +R+V + G+ + A E+I L + + ++ F Q
Sbjct: 249 ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDRSVLPLFEMQ 298
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S +S+K++VP + +IG AG I Y++ +SGA I I + VEI G+ S
Sbjct: 392 SQLSQKMQVPLSYADAVIGSAGANISYIRKHSGATISIQEGVPGE-----MTVEIAGSAS 446
Query: 258 NIDKAEKLINAVIAEA 273
+ A++LI +AEA
Sbjct: 447 QVQTAQQLIKNFMAEA 462
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 97/244 (39%), Gaps = 49/244 (20%)
Query: 69 DDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHSSVEEQASVD 128
+++ EKP G E+ + D Q+T K+E++ + + S+EE A+VD
Sbjct: 38 EEEAEKPSADEEPKGTNNEESENPSDEAQVT---VKDEDMGDQNREDQAIGSLEEPANVD 94
Query: 129 N-----QQIS--VKEETK----------EVLFSTEE--AFIDVKEETKEVTVKE------ 163
Q++ V E+TK VL ST++ A I K E + E
Sbjct: 95 GGEAEADQLANVVAEDTKWPGWPGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIK 154
Query: 164 ---------EETVKEEESVEPSNVVPQQV-----VDNSKSDDPSSTDDSTMS-------R 202
E V EP +VP + V N +D S D
Sbjct: 155 ILDGPPGVPERAVMISAKDEPDALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPT 214
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
++ VP ++ G LIGK G TI+ +Q S ++I + R VEI G ++ KA
Sbjct: 215 RLLVPASQAGSLIGKQGTTIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPHDVHKA 274
Query: 263 EKLI 266
+LI
Sbjct: 275 VELI 278
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 37/245 (15%)
Query: 167 VKEEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQ 226
VK++ES++ V+ P DS +I VP KVG +IG+ G+ I+ +
Sbjct: 92 VKQQESLQ---------VEGEDKRWPGWPGDSVF--RILVPAQKVGAIIGRKGEFIKKMC 140
Query: 227 YNSGAKIQITRDADADPHAATRPVEIIGT------LSNIDKAEKLINAVIAEADAG--GS 278
S A+I+I D P R V I +S I+ I + G G
Sbjct: 141 EQSKARIKIL---DGPPGVTERAVIISAKDEPDEPISPAMDGLLRIHKRITDGSDGEFGQ 197
Query: 279 PSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPE 338
P RG + + + VP + G +IG+ G TIK +Q S + ++++ +++P
Sbjct: 198 PQ---RGASNVGPT------RLLVPASQAGSLIGKQGATIKSIQDSSKSVVRIV-ENVPP 247
Query: 339 GDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQ-----AYRPRVPTGP 393
+ +R+V + G+ + A E+I L + + ++ F QQ R + T P
Sbjct: 248 VALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDHSVLPLFEQQMKMHSVQREQPMTAP 307
Query: 394 PQWGP 398
W P
Sbjct: 308 QHWTP 312
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 120/277 (43%), Gaps = 43/277 (15%)
Query: 187 SKSDDPSSTDDSTMSRKIE--VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPH 244
++++ P+ + D T I + + + +IGK G+ + ++ +SGAK ++ D
Sbjct: 120 AQANPPAESRDETAWIHIRAVISSPEAATIIGKGGENVSKIRQSSGAKCTVS---DYQKG 176
Query: 245 AATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ------V 298
A VE I T+S + V A A A G L+ R L S + Q +
Sbjct: 177 A----VERILTVSGV---------VDAAAKAFG---LIIRTLNNEPLSEPSNQHSKTYPL 220
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+ +P+ +G IIG+GG IK +Q SGAR+ LP S ER + VTG + I
Sbjct: 221 RLLIPHVLIGSIIGKGGSRIKEIQEASGARLNASDSCLP---ASSERSLVVTGVADAVHI 277
Query: 359 AQEMIKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGS----HPSQPMAYDYPQR 414
A + L + + + GG AY R +G P G + QP ++ QR
Sbjct: 278 ATYYVGSTLLEQL--NERFGGAAASAYATR--SGGPAAVTGGMTVVPYVPQPAGGNFGQR 333
Query: 415 GPYPSQNP-----HYPHLPYGNYPPQQMAPRSNYGGP 446
Y ++ P H P YG P P++ + GP
Sbjct: 334 DHYNNRRPDPRAHHMPPQAYGGAPQYGAYPQAAHPGP 370
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG+ I ++ SG+ I++ PQ D S ER+V +TG +
Sbjct: 429 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQ-----DNSNERLVTITGTDECNK 483
Query: 358 IAQEMI 363
+A M+
Sbjct: 484 MALYML 489
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 137/303 (45%), Gaps = 35/303 (11%)
Query: 109 ESAEVKTEQH----SSVEEQASVDNQQISVKEETKEVLFSTEEAF-------IDVKEETK 157
E A++KTE+ S V EQ + ++ S EE KE TEE +++K E
Sbjct: 23 EPADIKTEEQANPDSDVPEQYEEELEKPSPDEELKEP--KTEECGNPNDGLQVNMKIENM 80
Query: 158 EVTVKEEETVKEEESVEPSNV----VPQQVVDNSKSDD---PSSTDDSTMSRKIEVPNNK 210
+KE++ + E+ P++V + + N +++D P +S ++ VP K
Sbjct: 81 GHELKEDQAIPSHEA--PADVDGGEAEAEQLANVETEDKKWPGWPGESVF--RVLVPVQK 136
Query: 211 VGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVI 270
VG +IG+ G+ I+ + S A+I+I D P R V I S D+ + L++ +
Sbjct: 137 VGAVIGRKGEFIKKMCEESRARIKIL---DGPPGVPERAVMI----SAKDEPDALVSPAV 189
Query: 271 ---AEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGA 327
+ L + + +G + VP + G +IG+ G TIK +Q S
Sbjct: 190 DGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQGATIKSIQDASKC 249
Query: 328 RIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRP 387
++++ +++P + +R+V + G+ + A E+I L + + ++ F Q
Sbjct: 250 ALRIL-ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFEAQMKVH 308
Query: 388 RVP 390
VP
Sbjct: 309 NVP 311
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 124/270 (45%), Gaps = 41/270 (15%)
Query: 118 HSSVEEQASVDNQQISVKEETKEVL----FSTEEAFIDVKEETKEVTVKEEETVKEEESV 173
+SS ++ ++D++Q+ ++++ +E+ T + ++ E++E+ + E+ K +E++
Sbjct: 63 NSSSIKRIALDSEQLDLQDKEEELQQTAPIITNNSTSHLETESEELDKQNEDANKTQETL 122
Query: 174 EPS----------------NVVPQQVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGK 217
EP+ + + V ++ DDP+ + ++ P + ++G+
Sbjct: 123 EPAYAPSESDHADDQNTGSSSSSKPVSNHRDRDDPT-----FIQLRMYCPVKEASTIVGR 177
Query: 218 AGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGG 277
G+TI +L+ + +I ++ + P R V + G N+ +A LI VI E
Sbjct: 178 KGETINHLREKANVRITVSENLKGVPE---RIVAVKGPAENVARAFGLITRVILEEPEDE 234
Query: 278 SPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLP 337
S+ + +++ +P+ +G IIG+ G + ++ S A+++ LP
Sbjct: 235 PASI----------NSQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENALP 284
Query: 338 EGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
S +R++ V G I IA I +V+
Sbjct: 285 Y---STDRVLSVMGVGDAIHIAVYYIAQVM 311
>gi|413941635|gb|AFW74284.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 348
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 158/405 (39%), Gaps = 141/405 (34%)
Query: 426 HLPYGNYPPQQMAPRSNYG-----GP---PNMQGAAGGYDYYGGQGGHVSD-RPVSVSHS 476
+ PYG YPPQ + R G GP P+ QG GG DYY QG D +P S
Sbjct: 8 NAPYGGYPPQGPS-RGGMGWDQRPGPPTHPSYQG--GGSDYY-KQGSQPYDSQPPSY--- 60
Query: 477 TSIPGHPSVPAQAPAGGPPPSQANYN-YGQPHTSEYGHQQPYAHAAPQQGYGHGYDD--- 532
PP NYN YGQ YG Q Y APQQ Y HGY D
Sbjct: 61 ------------------PPGPGNYNSYGQSQGPNYGQPQ-YPQHAPQQNYSHGYGDPRY 101
Query: 533 NHAPVQHPYGGHSNSQPVYSQGGLQSGYHQH--QYGKPPYGMPAQGT------------- 577
N P Y G P Q GY Q Y +PPY P Q T
Sbjct: 102 NAPPPNQQYYGQPPMAP-------QQGYPQQPDPYARPPYSGPGQWTPRGAPAADGSYQA 154
Query: 578 QPQSYGPPRPGQPGDIPPYQSQVPSA--QSYGPNVPHQQQYPYATSGP--TQQTYPSYGS 633
P SYGPP SQ P A Q+YG A +GP Q
Sbjct: 155 PPSSYGPP------------SQQPPAYGQTYG-----------AATGPDGYGQQGYPQQG 191
Query: 634 APAPDSYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPE 693
P SY Q +APGYPQQ Q GY QY TQ AY +
Sbjct: 192 GQVPASYGQSAPAAPGYPQQGTQ---------------------QGGYAQYPQTQPAYGD 230
Query: 694 QPATSNAGYGYQGT-QDPSYGSSAP---------------GSAYAAPT------GQPGYA 731
Q A +NA YGYQG DP+YGS+ P G A +AP GQ GY
Sbjct: 231 QAAQANANYGYQGAPADPNYGSAYPQQPGYGPPGQATGQAGYASSAPAASQPVYGQAGYT 290
Query: 732 QPAATQPSYDQSAS-QSTAYGVA------QGTAAAGYGKTVSPQP 769
QP PSYDQSA+ +T G A Q AAA K VSPQP
Sbjct: 291 QPPTNPPSYDQSAAPAATQSGYAAPPANPQQPAAA---KGVSPQP 332
>gi|407641212|ref|YP_006804971.1| hypothetical protein O3I_000170 [Nocardia brasiliensis ATCC 700358]
gi|407304096|gb|AFT97996.1| hypothetical protein O3I_000170 [Nocardia brasiliensis ATCC 700358]
Length = 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 65/141 (46%), Gaps = 21/141 (14%)
Query: 639 SYNQPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTA-GYGQYTNTQQAYPE---- 693
+Y QP PGY QQ G A Y Q G Q P YGQ GYGQ Q Y E
Sbjct: 78 AYGQPGYQEPGYGQQQGYADRAYGQQG-YQEPGYGQQGYQEPGYGQ-----QGYQEPGYG 131
Query: 694 QPATSNAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAATQPSY-DQSASQSTAYGV 752
QP GYG Q DP+YG G A QPGY Q +P Y DQ+ ++ AYG
Sbjct: 132 QPGYGQQGYGDQAYADPAYGQQGQGYA------QPGYGQQGYAEPGYGDQAYAEPGAYGQ 185
Query: 753 AQGTAAAGYGKTVSPQPGYPQ 773
GYG+ S QPGY Q
Sbjct: 186 ---DDQGGYGQAYSQQPGYGQ 203
>gi|313228886|emb|CBY18038.1| unnamed protein product [Oikopleura dioica]
Length = 626
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P+ VG++IG+ G+ I+ +Q + IQ+ + + RP + GT + A+
Sbjct: 55 IPDQLVGLVIGRGGENIQRIQAETNCGIQVQAQSTG---SENRPCTLTGTPEQLQAAKNA 111
Query: 266 INAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRS 325
+ ++ + E + +KVG++IG+GG+ +K L+ +
Sbjct: 112 LQNDSRNRAPNTRRAVTQPPMPNPSQPWQTTCEEFLISPDKVGVVIGKGGQNLKNLRQKY 171
Query: 326 GARIQLIPQHL-PEGDGSKERIVRVTGDMRQI 356
++L+ + PEG +++++TG+ QI
Sbjct: 172 QVSLELVQKDTDPEGVA---KVLKITGNSTQI 200
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
E +P++ VGL+IGRGGE I+ +Q + IQ+ Q GS+ R +TG Q++
Sbjct: 52 EYPIPDQLVGLVIGRGGENIQRIQAETNCGIQVQAQ----STGSENRPCTLTGTPEQLQA 107
Query: 359 AQEMIK 364
A+ ++
Sbjct: 108 AKNALQ 113
>gi|255732373|ref|XP_002551110.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131396|gb|EER30956.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 576
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 153 KEETKEVTVKEEETVK---------EEESVEPSNVVPQQVVDNSKSDDPSSTDDSTMSRK 203
K+ET + + K++ T++ E + EPS+ + + ++ + DDP+ +S +
Sbjct: 129 KDETNDSSAKQDATLEPAYVPEASTESHAEEPSSS-SKPISNHREKDDPT-----FVSFR 182
Query: 204 IEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAE 263
+ P + ++GK G+TI +L+ + +I ++ + P R V + G N+ +A
Sbjct: 183 MYCPVKEASAIVGKKGETISHLREKAAVRITVSDNLKGVPE---RIVTVKGPAENVARAF 239
Query: 264 KLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQT 323
LI VI + P A + +++ +P+ +G IIG+ G + ++
Sbjct: 240 GLITRVILN-EPEDEP---------ASINSLQYNLKLLIPHPLIGFIIGKSGLKFREIEE 289
Query: 324 RSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
S A+++ LP S +R++ V G I IA I +V+
Sbjct: 290 NSAAKLKAAETPLPY---STDRVLSVMGVGDAIHIAVYYISQVI 330
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA 241
+V+ N D+P+S + + K+ +P+ +G +IGK+G R ++ NS AK++
Sbjct: 244 RVILNEPEDEPASINSLQYNLKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAE--TP 301
Query: 242 DPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
P++ R + ++G I A I+ VI E
Sbjct: 302 LPYSTDRVLSVMGVGDAIHIAVYYISQVILE 332
>gi|224145052|ref|XP_002325509.1| predicted protein [Populus trichocarpa]
gi|222862384|gb|EEE99890.1| predicted protein [Populus trichocarpa]
Length = 192
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 103/239 (43%), Gaps = 74/239 (30%)
Query: 1 MAEEEVLAPASA-AAADLKRKLDDLEPDEALEHAEGMRDDEAKNSDEVEKNVDGFAEAHG 59
MA EEV+APA A+D KRKL DLEP E LE AE DE + EV + D +
Sbjct: 1 MAAEEVVAPAVIPVASDHKRKLGDLEP-EVLEQAEPSPVDEQEP--EVTEKADDVEDGGS 57
Query: 60 SEVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDTTKEEELESAEVKTEQHS 119
E KR R+D+ KT DG + NG K +K DE A +TE+ S
Sbjct: 58 PETKRLRIDESKT---DGLASENGFKGDKSDE------------------RAREETEEQS 96
Query: 120 SVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEETKEVTVKEEETVKEEESVEPSNVV 179
EQ DN V+ ++EVL +T+ KEET V + ++
Sbjct: 97 VENEQEKDDN----VEPPSEEVLETTD------KEETNAV-------------IPETDNT 133
Query: 180 PQQVVDNSKSDD-----------PSSTD---------------DSTMSRKIEVPNNKVG 212
Q VD SK +D PS D D T SRKIEVPN+KV
Sbjct: 134 DQATVDGSKDEDAEKPSLEDAEQPSLEDAEKLSLEDAEEHLSEDQTTSRKIEVPNDKVC 192
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 46/259 (17%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IGK G+ + ++ SGAK ++ D A R + + G + + KA LI + +
Sbjct: 143 IIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQVDAVSKAFGLIVRTLNQE 199
Query: 274 DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
D +PS ++ A + + +P+ +G IIG+ G I+ +Q S A++
Sbjct: 200 DLE-TPS---------TSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASD 249
Query: 334 QHLPEGDGSKERIVRVTGDMRQIE---IAQEMIKEVLSQTVRPS-------------TLS 377
LP G + IV D I +AQ +++++ + P+ +
Sbjct: 250 TLLPN-SGERSLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVP 308
Query: 378 GGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPY---------PSQNPH-YPHL 427
GG + Q Y P+ P G P+ +P A P G Y P Q+P+ +P++
Sbjct: 309 GGMSVQPYVPQ-PAGGQYSHPQNFRRQEP-AQRTPAHGGYGAPHMHGQPPQQSPYGHPNM 366
Query: 428 PYGNYPPQQMAPRSNYGGP 446
PYG P R YGGP
Sbjct: 367 PYGAASPS----RGPYGGP 381
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I +PN+ VG IIG+GG I ++ SG+ I++ + P D S ER+V +TG ++
Sbjct: 417 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPT-DNSNERLVTITGTQECNQM 472
Query: 359 AQEMI 363
A M+
Sbjct: 473 ALYML 477
>gi|115445109|ref|NP_001046334.1| Os02g0224300 [Oryza sativa Japonica Group]
gi|46805645|dbj|BAD17064.1| high molecular weight glutenin subunit x-like protein [Oryza sativa
Japonica Group]
gi|113535865|dbj|BAF08248.1| Os02g0224300 [Oryza sativa Japonica Group]
Length = 421
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 363 IKEVLSQTVRPSTLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNP 422
++ + Q + +SGG++QQ YRP P WGP G P Q Y Y Q G YP P
Sbjct: 26 VQTIFLQNRARNPMSGGYSQQGYRPPRPQS--NWGPHGGAPMQQPGYGYMQPGAYPGAPP 83
Query: 423 HY--PHLPYGNYPP 434
Y P PYG+YPP
Sbjct: 84 QYGAPQQPYGSYPP 97
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IGK G+ + ++ SGAK ++ D A R + + G + + KA LI +
Sbjct: 139 IIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVAKAFGLIIRTLNN- 194
Query: 274 DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
+ G PS +Q S + + +P+ +G IIG+GG IK +Q SGAR+
Sbjct: 195 EPLGEPS--------SQHS-KTYPLRLLIPHILIGSIIGKGGARIKEIQEASGARLNASD 245
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR 388
LP S ER + V G + IA + L + + + GG + AY R
Sbjct: 246 SCLPL---STERSLVVMGVADAVHIATYYVGSTLLEQL--NERFGGASASAYATR 295
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG+ I ++ SG+ I++ PQ D S ER+V +TG
Sbjct: 414 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQ-----DNSNERLVTITGTEECNR 468
Query: 358 IAQEMIKEVL 367
+A M+ L
Sbjct: 469 MALYMLYSRL 478
>gi|346979418|gb|EGY22870.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 477
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 54/298 (18%)
Query: 163 EEETVKEEESVEPSNVVPQQVVDNSKSDDP-SSTDDSTMSRKIE--VPNNKVGVLIGKAG 219
+EET E E+ + + V N S P +ST D T I + + + +IGK G
Sbjct: 77 KEET--EGEAADEPKPIASAVAGNVPSSTPNASTHDETAWIHIRAVISSPEAATVIGKGG 134
Query: 220 DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSP 279
+ + ++ SGAK ++ D A VE I T+S + V A A A G
Sbjct: 135 ENVSNIRKMSGAKCTVS---DYQKGA----VERILTVSGV---------VDASAKAFG-- 176
Query: 280 SLVARGLAT------AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
L+ R L + A + + +P+ +G IIG+GG I+ +Q SGAR+
Sbjct: 177 -LIIRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASD 235
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR----- 388
LP S ER + V G + IA + L + + + GG AY R
Sbjct: 236 SCLPM---STERSLVVMGVADAVHIATYYVGSTLLEQL--NDRFGGPAASAYATRSGGPA 290
Query: 389 ---------VPTGP-PQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG-NYPPQ 435
VP P P G G+ + +D RG +P Q+ H P PYG YPP
Sbjct: 291 GVVPGGMQVVPYCPQPTTGNYGNRENFGRRHD--ARGQHPQQH-HMPPAPYGQQYPPH 345
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG+ I ++ SG+ I++ PQ D S ER+V +TG
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQ-----DNSNERLVTITGTDETNR 460
Query: 358 IAQEMI 363
+A M+
Sbjct: 461 MALYML 466
>gi|302414660|ref|XP_003005162.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261356231|gb|EEY18659.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 478
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 124/298 (41%), Gaps = 54/298 (18%)
Query: 163 EEETVKEEESVEPSNVVPQQVVDNSKSDDP-SSTDDSTMSRKIE--VPNNKVGVLIGKAG 219
+EET E E+ + + V N S P +ST D T I + + + +IGK G
Sbjct: 77 KEET--EGEAADEPKPIASAVAGNVPSSTPNASTHDETAWIHIRAVISSPEAATVIGKGG 134
Query: 220 DTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSP 279
+ + ++ SGAK ++ D A VE I T+S + V A A A G
Sbjct: 135 ENVSNIRKMSGAKCTVS---DYQKGA----VERILTVSGV---------VDASAKAFG-- 176
Query: 280 SLVARGLAT------AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
L+ R L + A + + +P+ +G IIG+GG I+ +Q SGAR+
Sbjct: 177 -LIIRTLNNEPLDEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGARLNASD 235
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR----- 388
LP S ER + V G + IA + L + + + GG AY R
Sbjct: 236 SCLPM---STERSLVVMGVADAVHIATYYVGSTLLEQL--NDRFGGPAASAYATRSGGPA 290
Query: 389 ---------VPTGP-PQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG-NYPPQ 435
VP P P G G+ + +D RG +P Q+ H P PYG YPP
Sbjct: 291 GVVPGGMQVVPYCPQPTTGNYGNRENFGRRHD--ARGQHPQQH-HMPPAPYGQQYPPH 345
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG+ I ++ SG+ I++ PQ D S ER+V +TG
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQ-----DNSNERLVTITGTDETNR 460
Query: 358 IAQEMIKEVLSQTV 371
+A M+ L +TV
Sbjct: 461 MALYMLYSRLDRTV 474
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 43/247 (17%)
Query: 61 EVKRPRLDDDKTEKPDGPVNVNGLKEEKPDEVVDAEQLTEDT-----------TKEEELE 109
+ KRP LD K K D V + EKP+E DA + E T +E E E
Sbjct: 30 DAKRPALD--KILKNDDEVAM----AEKPEEEDDAGAVVEATEAAPSETTNGAKEETEGE 83
Query: 110 SAE--------------VKTEQHSSVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEE 155
+A+ T S+ +E A + + + E V+ E ++++
Sbjct: 84 AADEPKPIASAVAGNVPSSTPNASTHDETAWIHIRAVISSPEAATVIGKGGENVSNIRKM 143
Query: 156 T-KEVTVKEEETVKEEESVEPSNVVPQ---------QVVDNSKSDDPSSTDDSTMSRKIE 205
+ + TV + + E + S VV + ++N D+PSS T ++
Sbjct: 144 SGAKCTVSDYQKGAVERILTVSGVVDASAKAFGLIIRTLNNEPLDEPSSAQSKTYPLRLL 203
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+P+ +G +IGK G IR +Q SGA++ + P + R + ++G + A
Sbjct: 204 IPHILIGSIIGKGGARIREIQEASGARLNASD--SCLPMSTERSLVVMGVADAVHIATYY 261
Query: 266 INAVIAE 272
+ + + E
Sbjct: 262 VGSTLLE 268
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 132/339 (38%), Gaps = 59/339 (17%)
Query: 185 DNSKSDDPSSTDDST-MSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADP 243
D S S + D+S+ + + + + + +IGK G+ + ++ SGAK ++ D
Sbjct: 103 DQSSSGNALQHDESSWIHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVS---DYQK 159
Query: 244 HAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQ---VEI 300
A R + + G +D A K +I + G P Q S + + +
Sbjct: 160 GAVERILTVSGV---VDAAAKAFGLIIRTLN--GEP--------LDQPSTPQSRTYPLRL 206
Query: 301 KVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQ 360
VP+ +G IIG+GG I+ +Q +SGAR+ LP S ER V V G + IA
Sbjct: 207 LVPHVLIGSIIGKGGVRIREIQEQSGARLNASDACLPL---STERSVVVLGVADAVHIAT 263
Query: 361 EMIKEVLSQTVRPSTLSGGFNQQAYRPR--------------VPTGPPQWGPRGSHPSQP 406
+ L + + + GG AY R VP P G HP
Sbjct: 264 YYVASTLLEQL--TERFGGPTASAYATRSGGPAGVIPGGMQVVPYVPQPAGGNYGHPDNV 321
Query: 407 MAYDYPQRGPYPSQNPHYPH-LPYGNYP-PQQMAPRSNYGGPPNMQGAAGGYDYYGGQGG 464
D R Q P + PY P PQQ +YGG P A GY GG
Sbjct: 322 RHNDIRSR-----QTPAAQYGQPYAQGPGPQQGGASMHYGGSP-----AAGY------GG 365
Query: 465 HVSDRPVSVSHS--TSIPGHPSVPAQAPAGGPPPSQANY 501
+P V H S G P+ P Q G P +Q Y
Sbjct: 366 VAPQQPQQVGHGGPASHAGPPAQPMQGVVPGQPLTQQIY 404
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG I ++ SG+ I++ PQ D S ER+V +TG +
Sbjct: 402 QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQ-----DNSNERLVTITGTAECNQ 456
Query: 358 IAQEMI 363
+A M+
Sbjct: 457 MALYML 462
Score = 39.7 bits (91), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 23/223 (10%)
Query: 68 DDDKTEKPDGPVNVNGLKEEKPD---EVV-----DAEQLTEDTTKEEELESAEVKTEQHS 119
D+ K +G + NG++ E D +VV D + E + +S+ QH
Sbjct: 55 DEAGDAKVEGGDSTNGVQTESKDTQGDVVVGDAPDGTRTVEGSILSTGDQSSSGNALQH- 113
Query: 120 SVEEQASVDNQQISVKEETKEVLFSTEEAFIDVKEET-KEVTVKEEETVKEEESVEPSNV 178
+E + + + + E V+ E +++ + + TV + + E + S V
Sbjct: 114 --DESSWIHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVSGV 171
Query: 179 VPQ---------QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNS 229
V + ++ D PS+ T ++ VP+ +G +IGK G IR +Q S
Sbjct: 172 VDAAAKAFGLIIRTLNGEPLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQS 231
Query: 230 GAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
GA++ + DA P + R V ++G + A + + + E
Sbjct: 232 GARLNAS-DA-CLPLSTERSVVVLGVADAVHIATYYVASTLLE 272
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 115/290 (39%), Gaps = 61/290 (21%)
Query: 196 DDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGT 255
+ + + + + ++ +IGK G+ + ++ SGAK ++ D A R + + G
Sbjct: 123 ETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSGQ 179
Query: 256 LSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGG 315
+ + KA LI + + D A + ++ A + + +P+ +G IIG+ G
Sbjct: 180 VDAVSKAFGLIVRTLNQEDLE----------APSTSTSKAYPMRLLIPHILIGSIIGKAG 229
Query: 316 ETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE---IAQEMIKEVLSQTVR 372
I+ +Q S A++ LP G + +V D I +AQ +++++ +
Sbjct: 230 VRIREIQEASNAKLNASDTLLPN-SGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFGG 288
Query: 373 PS-------------TLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDY--PQRGPY 417
P+ + GG + Q Y P+ P G QP + PQR P
Sbjct: 289 PAASQYATRSGMAANVVPGGMSVQPYVPQ---------PAGGQYQQPNNFRRQEPQRTPA 339
Query: 418 P---SQNPHY-------------PHLPYGNYPPQQMAPRSNYGGPPNMQG 451
PH P +PYG P R++YGGPP G
Sbjct: 340 HGGYGAAPHMQPGAPVHPSPYGQPQMPYGAGSPG----RAHYGGPPQQPG 385
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I +PN+ VG IIG+GG I ++ SG+ I++ + P D S ER+V +TG ++
Sbjct: 416 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI---NEPT-DNSNERLVTITGTQECNQM 471
Query: 359 AQEMIKEVLSQ 369
A M+ L +
Sbjct: 472 ALYMLYSRLGE 482
>gi|167538240|ref|XP_001750785.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770702|gb|EDQ84384.1| predicted protein [Monosiga brevicollis MX1]
Length = 457
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 225 LQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVAR 284
+Q SGA + + R+ D R V I+GT I K E+LI A + G P +
Sbjct: 232 IQDLSGAHVDVDREDGPD---GRRRVCIVGTPEQIAKCEELITAKM-----NGDPLPIP- 282
Query: 285 GLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKE 344
A A ++++ +PN VG +IG+GG+TI+ +Q +G + + P G+ +
Sbjct: 283 ----ANAGLNPNEMKVTIPNNMVGRVIGKGGQTIRDIQQNTGCHLDVAKD--PNGETGQR 336
Query: 345 RIVRVTGDMRQIEIAQEMIKEVL 367
IV + G+ Q +I E +
Sbjct: 337 DIV-IKGNPAQCIQCCHVINETI 358
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 203 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKA 262
K+ +PNN VG +IGK G TIR +Q N+G + + +D + + R + I G + +
Sbjct: 293 KVTIPNNMVGRVIGKGGQTIRDIQQNTGCHLDVAKDPNGE--TGQRDIVIKGNPAQCIQC 350
Query: 263 EKLINAVI 270
+IN I
Sbjct: 351 CHVINETI 358
>gi|406866225|gb|EKD19265.1| KH domain RNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 545
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 36/265 (13%)
Query: 206 VPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKL 265
+ + + +IGK G+ + ++ SGAK ++ D A R + + G +D A K
Sbjct: 126 ITSAEAATVIGKGGENVSSIRKMSGAKCTVS---DYQKGAVERILTVSGV---VDAAAKA 179
Query: 266 INAVIAEADAGGSPSLVARGL-ATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTR 324
+I +L L A + A + + +P+ +G IIG+GG I+ +Q
Sbjct: 180 FGLIIR--------TLNNEPLEAPSSAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEA 231
Query: 325 SGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQA 384
SGAR+ LP S ER + V G + IA + L + + S GG A
Sbjct: 232 SGARLNASDSCLPL---STERSLVVLGVADAVHIATYYVGSTLFEQL--SERFGGPAASA 286
Query: 385 YRPR--------------VPTGPPQWGPRGSHPSQPMAYDYPQRGPYPSQNPHYPHLPYG 430
Y R VP P G HP + P + PSQ + P+ +G
Sbjct: 287 YASRSGGPAGVVPGGMQVVPYVPQPAGGNFGHPDHRRHQERPHQ--TPSQGYNQPYSGHG 344
Query: 431 NYPPQQMAPRSNYGGPPNMQGAAGG 455
PQQ +YGG P +QG GG
Sbjct: 345 QPQPQQPGNPMHYGGSPVVQGGYGG 369
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG I ++ SG+ I++ PQ D S ER+V +TG +
Sbjct: 406 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQ-----DNSNERLVTITGTAECNQ 460
Query: 358 IAQEMIKEVLSQ 369
+A M+ L +
Sbjct: 461 MALYMLYSRLER 472
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 182 QVVDNSKSDDPSSTDDSTMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADA 241
+ ++N + PSS T ++ +P+ +G +IGK G IR +Q SGA++ +
Sbjct: 185 RTLNNEPLEAPSSAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGARLNASD--SC 242
Query: 242 DPHAATRPVEIIGTLSNIDKAEKLINAVIAE 272
P + R + ++G + A + + + E
Sbjct: 243 LPLSTERSLVVLGVADAVHIATYYVGSTLFE 273
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI-----NA 268
+IGK G+ + ++ S AK ++ D A R + + G + + KA LI N
Sbjct: 132 IIGKGGENVSNIRKMSNAKCTVS---DYQKGAVERILTVSGIVDAVAKAFGLIIRTLNNE 188
Query: 269 VIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
++EA S + R L +P+ +G IIG+GG I+ +Q SGAR
Sbjct: 189 PLSEASTASSKTYPLRLL---------------IPHILIGSIIGKGGSRIREIQEASGAR 233
Query: 329 IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR 388
+ LP S ER + V G + IA + L + + G + A R
Sbjct: 234 LNASDSCLPM---SSERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPGASAYATRSG 290
Query: 389 VPTG 392
P G
Sbjct: 291 APVG 294
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG+ I ++ SG+ I++ PQ D S ER+V +TG
Sbjct: 403 QIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQ-----DNSNERLVTITGTEECNR 457
Query: 358 IAQEMIKEVLSQTVRPST 375
+A M+ L +T ST
Sbjct: 458 MALYMLYSRLGETQNRST 475
>gi|39992630|gb|AAH64454.1| Khsrp protein [Mus musculus]
Length = 311
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 308 GLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
GL+IGRGGE +K + ++GA +++ Q P GD + + V + G +QI+ A+++I+E +
Sbjct: 1 GLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFV-IRGSPQQIDHAKQLIEEKI 59
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 137/345 (39%), Gaps = 76/345 (22%)
Query: 151 DVKEETKEVTVKEEETVKEE--ESVEPSNVVPQ--QVVDNSKSDDPSSTDDSTMSR---- 202
D+K++ + V + V E E+V+P VVP +++ S + +S
Sbjct: 63 DIKQDGAQPDVDVVDAVAENGVENVQPDTVVPDAPSILETQPIQSTSGANGRPLSHNQQV 122
Query: 203 --------KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIG 254
+ + ++ +IGK G+ + ++ SGAK ++ D A R + + G
Sbjct: 123 DETNWLHVRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVS---DYSRGAVERILTVSG 179
Query: 255 TLSNIDKAEKLINAVIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRG 314
+ + KA LI + + D +PS ++ A + + +P+ +G IIG+
Sbjct: 180 QVDAVSKAFGLIVRTLNQEDLE-TPS---------TSTSKAYPMRLLIPHILIGSIIGKA 229
Query: 315 GETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIE---IAQEMIKEVLSQTV 371
G I+ +Q S A++ LP G + +V D I +AQ +++++ +
Sbjct: 230 GVRIREIQEASNAKLNASDTLLPN-SGERSLVVLGVADAVHIAVYYVAQTLVEQLTERFG 288
Query: 372 RPS-------------TLSGGFNQQAYRPRVPTGPPQWGPRGSHPSQPMAYDY------P 412
P+ + GG + Q Y P+ P G S P + P
Sbjct: 289 GPAASQYATRSGMAANVVPGGMSVQPYVPQ---------PAGGQYSHPQNFRREPTQRTP 339
Query: 413 QRGPYPSQNPH-----------YPHLPYGNYPPQQMAPRSNYGGP 446
G Y + + H +P++PYG P R+ YGGP
Sbjct: 340 AHGGYGAAHMHGGQPPQPSPYGHPNMPYGAGSPG----RAPYGGP 380
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIPQHLPEGDGSKERIVRVTGDMRQIEI 358
+I +PN+ VG IIG+GG I ++ SG+ I++ + P D S ER+V +TG ++
Sbjct: 417 QIFIPNDMVGAIIGKGGAKINEIRQLSGSMIKI---NEPT-DNSNERLVTITGTQECNQM 472
Query: 359 AQEMIKEVL 367
A M+ L
Sbjct: 473 ALYMLYSRL 481
>gi|347842448|emb|CCD57020.1| similar to KH domain RNA binding protein [Botryotinia fuckeliana]
Length = 488
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEA 273
+IGK G+ + ++ SGAK ++ D A R + + G + + KA LI +
Sbjct: 140 VIGKGGENVSLVRKLSGAKCTVS---DYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNE 196
Query: 274 DAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLIP 333
A + ++ + + +P+ +G IIG+GG IK +Q SGAR+
Sbjct: 197 PLE----------APSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASD 246
Query: 334 QHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVL 367
+LP S ER + V G + IA + L
Sbjct: 247 SYLPL---STERSLVVLGVADAVHIATYYVGSTL 277
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 299 EIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIVRVTGDMRQIE 357
+I +PN+ VG IIG+GG I ++ SG+ I++ PQ D S ER+V +TG +
Sbjct: 415 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQ-----DNSNERLVTITGTAECNQ 469
Query: 358 IAQEMI 363
+A M+
Sbjct: 470 MALYML 475
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 28/180 (15%)
Query: 214 LIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLSNIDKAEKLI-----NA 268
+IGK G+ + ++ SGAK ++ D A R + + G + + KA LI N
Sbjct: 137 IIGKGGENVSKIRQMSGAKCTVS---DYQKGAVERILTVSGIVDAVAKAFGLIIRTLNNE 193
Query: 269 VIAEADAGGSPSLVARGLATAQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGAR 328
+ E + S + R L +P+ +G IIG+GG IK +Q SGAR
Sbjct: 194 PLNEPSSQHSKTYPLRLL---------------IPHILIGSIIGKGGARIKEIQEASGAR 238
Query: 329 IQLIPQHLPEGDGSKERIVRVTGDMRQIEIAQEMIKEVLSQTVRPSTLSGGFNQQAYRPR 388
+ LP S ER + V G + IA + L + + + GG AY R
Sbjct: 239 LNASDSCLPL---STERSLVVMGVADAVHIATYYVGSTLLEQL--NERFGGAAASAYATR 293
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 289 AQASGAAEQVEIKVPNEKVGLIIGRGGETIKGLQTRSGARIQLI-PQHLPEGDGSKERIV 347
A GA +I +PN+ VG IIG+GG+ I ++ SG+ I++ PQ D S ER+V
Sbjct: 401 AHVPGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQ-----DNSNERLV 455
Query: 348 RVTGDMRQIEIAQEMIKEVL 367
+TG +A M+ L
Sbjct: 456 TITGTEECNRMALYMLYSRL 475
>gi|147818795|emb|CAN67283.1| hypothetical protein VITISV_021595 [Vitis vinifera]
Length = 382
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 75/179 (41%), Gaps = 33/179 (18%)
Query: 376 LSGGFNQQAYRPRVPTGPPQWG-PRGSHPSQPMAYDYPQRGPYPSQNPHY--PHLPYGNY 432
++GG+ QQ Y+ R P+G WG P G+ P Q Y Y Q G YP +P Y Y Y
Sbjct: 1 MAGGYPQQGYQARPPSG---WGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQPAYAGY 57
Query: 433 PPQQMAPRSNYGGPPNMQGAAG-GYDYYGGQGGHVSDRPVSVSHSTSIPGHPSVPAQAPA 491
PP+ Q G GYDYY G + +H G PS PA
Sbjct: 58 SQPNATGWDQTAAPPSQQTTPGSGYDYY----GQQQTQQQQQAH-----GGPSGPA---- 104
Query: 492 GGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNHAPVQHPYGGHSNSQPV 550
+ YNY QP S Y Q PQ GYG GY HAP P G+ QP+
Sbjct: 105 -----DNSGYNYNQPPASGYNQQ---GQGYPQDGYGGGY---HAPAPQP--GYGQPQPI 150
>gi|441514637|ref|ZP_20996453.1| hypothetical protein GOAMI_31_00270 [Gordonia amicalis NBRC 100051]
gi|441450548|dbj|GAC54414.1| hypothetical protein GOAMI_31_00270 [Gordonia amicalis NBRC 100051]
Length = 454
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 649 GYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAGYGYQGTQ 708
GY QQ G P Y Q G Q P Y Q GYGQ +QQ Y +QPA Y YQG
Sbjct: 295 GYGQQPGYGQPGYEQQGYGQQPGYDQ-----GYGQQGYSQQGYGQQPAA----YDYQGGY 345
Query: 709 DPSYGSSAPGSAYA 722
D YG+ P + YA
Sbjct: 346 DQGYGAGRPAAGYA 359
>gi|326507840|dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 931
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 88/221 (39%), Gaps = 33/221 (14%)
Query: 572 MPAQGTQPQSYGPPRPGQPG------DIPPYQSQVPSAQSYG--PNVPHQQQYP-YATSG 622
MP G QP+ +G RP Q P + S P +G P++ H+ Q+P + TS
Sbjct: 659 MPQDGRQPE-FGTSRPWQQTAGSPQVQQPNFGSATPVQPGFGSRPHIAHETQHPGFGTSR 717
Query: 623 PTQQTYPSYGSAPAPDSYNQPPASAPGYPQQAGQAVPNYPQPG-----GQQAPSYGQVAP 677
P Q +YG+ A Q P QQ+G Q G QQ+ G A
Sbjct: 718 PGQ---IAYGAQQA-----QQPGHGAQQAQQSGHGAHQAQQSGHGAHQAQQSGYGGHQAQ 769
Query: 678 TAGYGQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAATQ 737
GYG + Q Y A GYG TQ P YG A T QPGY A Q
Sbjct: 770 QPGYGAHQAQQPGYGAHQA-QQPGYGAHQTQQPGYG--------AHQTQQPGYGAHQAQQ 820
Query: 738 PSYDQSASQSTAYGVAQGTAAAGYGKTVSPQPGYPQYDSTQ 778
P Y ++ YG Q YG + QPGY + + Q
Sbjct: 821 PGYVTRQAEPLGYGAHQAQQPM-YGAHEAHQPGYGTHQAQQ 860
>gi|441509028|ref|ZP_20990950.1| hypothetical protein GOACH_07_01970 [Gordonia aichiensis NBRC
108223]
gi|441447033|dbj|GAC48911.1| hypothetical protein GOACH_07_01970 [Gordonia aichiensis NBRC
108223]
Length = 319
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 629 PSYGSAPAPDSYNQPP--ASAPGYPQQAGQA-----VPNYPQPGGQQAPSYGQVAPTAGY 681
P YGS P S Q P S P Y +GQA P Y P G +GQ A + Y
Sbjct: 112 PQYGSTPDYGSSGQAPQYGSTPDY-GSSGQAPQYGSTPEYGTPQG-----FGQSAGESAY 165
Query: 682 GQYTNTQQAYPEQPATSNAGYGYQGTQDPSYGSSAPGSAYAAPT-GQPGYAQPAATQPSY 740
GQ + Q +Y EQP T GYG Q P+YG +Y P GQP Y QPA QP+Y
Sbjct: 166 GQGAHGQPSYGEQPGTGQPGYGQQDYGQPNYGQ----PSYGQPAYGQPAYGQPAYGQPAY 221
Query: 741 DQ 742
Q
Sbjct: 222 GQ 223
>gi|302837871|ref|XP_002950494.1| hypothetical protein VOLCADRAFT_104736 [Volvox carteri f.
nagariensis]
gi|300264043|gb|EFJ48240.1| hypothetical protein VOLCADRAFT_104736 [Volvox carteri f.
nagariensis]
Length = 907
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 130 QQISVKEETKEVLFSTEEAFIDV--KEETKEVTVKEEETVKEEESVEPSNVVPQQVVDNS 187
Q++ + + VL T + + + +E +V V E ++ ++VE + Q + N+
Sbjct: 222 QEVVLSKRLAGVLIGTGGSNVSLVRRESRCKVHVSEVRGPEQTQTVELTGTEKQ--ISNA 279
Query: 188 KSD--------DPSSTDDS--TMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITR 237
+ DP D T+ +E+ VG ++GKAG TI+ ++ SGA +++
Sbjct: 280 VASIRRILTEFDPEHKVDIKPTVETTVEIYPEMVGSVLGKAGATIKVIRQKSGAHVRVE- 338
Query: 238 DADADPHAATRPVEIIGTLSNIDKAEKLINAVIAEADAGGSPSLVARGLA 287
D P + V I G++ + A + +I D P+ V G A
Sbjct: 339 --DLQPGERMQLVMIHGSIEQVKTAYAEVKGIIDRFD----PAKVKGGFA 382
>gi|377572148|ref|ZP_09801245.1| hypothetical protein GOTRE_152_00040 [Gordonia terrae NBRC 100016]
gi|377530644|dbj|GAB46410.1| hypothetical protein GOTRE_152_00040 [Gordonia terrae NBRC 100016]
Length = 448
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 642 QPPASAPGYPQQAGQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNTQQAYPEQPATSNAG 701
QP GY QQ G Y Q G Q P Y Q GY Q QQAY +QPA
Sbjct: 277 QPGYEQQGYSQQPGYGQQGYDQQGYGQQPGYDQGYGQQGYEQQGYGQQAYGQQPAN---- 332
Query: 702 YGYQGTQDPSYGSSAPGSAYA 722
Y YQG D YG+ P + YA
Sbjct: 333 YDYQGGYDQGYGAGRPAAGYA 353
>gi|242036531|ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
gi|241919514|gb|EER92658.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
Length = 927
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 113/299 (37%), Gaps = 72/299 (24%)
Query: 480 PGHPSVPAQAPAGGPPPSQANYNYGQPHTSEYGHQQPYAHAAPQQGYGHGYDDNH-APVQ 538
PG S PA P + Y QP S + + Q + P+ G H + AP
Sbjct: 585 PGFSSTPAVEPG---------FVYSQPRQSTFSNNQ---NQQPEFGSSHSWSPGFGAPQA 632
Query: 539 HPYGGHSNSQPVYSQGGL------QSGYHQHQYGKPPYGMPAQGTQPQSYGPPRPGQPGD 592
H YG SQPV + G QS + +Q +P +G + + +G P+ Q G
Sbjct: 633 HGYGA---SQPVQAVVGSSYSQPQQSKFSNNQNQRPEFG--SSHSYNSDFGAPQ-AQAGY 686
Query: 593 IPPYQSQVPSAQSYGPNVPHQQQYPYATSGPTQQTYPSYGSAPAPDSYNQPPASAPGY-- 650
P Q + SY P Q +T Q P +GS+ + +S P + PGY
Sbjct: 687 GAPQPVQAVAGSSYSQ--PQQ-----STFSNNQNQRPEFGSSHSYNSDFGAPQAQPGYGA 739
Query: 651 --PQQA--------------GQAVPNYPQPGGQQAPSYGQVAPTAGYGQYTNT------- 687
P QA Q VP Y G Q +GQ G +++N
Sbjct: 740 PQPVQAVAGSSQLRQSQFGASQGVPAYSNIGNQ----HGQFGSPHGESKFSNHPPQVGYG 795
Query: 688 ----QQAYPEQPATSNAGYG-------YQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAA 735
Q Y +P AG+G Y + PSYG+ S Y + GQ GY+ P A
Sbjct: 796 AQLPQSGYRFEPQQEQAGFGNRGALPAYVASSQPSYGTRWSSSGYGSTQGQLGYSGPQA 854
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 198 STMSRKIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPHAATRPVEIIGTLS 257
S ++ ++VP + +IG AG +I Y++ +SGA I I P T VEI G+ S
Sbjct: 388 SQITHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQEGV---PGEMT--VEISGSAS 442
Query: 258 NIDKAEKLINAVIAEA 273
+ A++LI +AEA
Sbjct: 443 QVQTAQQLIKNFMAEA 458
>gi|258653123|ref|YP_003202279.1| hypothetical protein Namu_2952 [Nakamurella multipartita DSM 44233]
gi|258556348|gb|ACV79290.1| hypothetical protein Namu_2952 [Nakamurella multipartita DSM 44233]
Length = 334
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 63/145 (43%), Gaps = 33/145 (22%)
Query: 640 YNQPPASAPGYPQQA------GQAVPNYPQPGGQQA----PSYGQVAPTAGYGQYTNTQQ 689
Y QP + PGY QQA G +Y QPGGQQ P YGQ P AG Q
Sbjct: 98 YAQPTSVQPGYGQQAPYGGQSGYDQGSYGQPGGQQGYYQQPGYGQSDPNAG--------Q 149
Query: 690 AYPEQPATS----NAGYGYQGTQDPSYGSSAPGSAYAAPTGQPGYAQPAATQPSYDQ--S 743
Y +QP NAG GY Q P YG S P + GY Q QP Y Q
Sbjct: 150 GYYQQPGYGQSDPNAGQGY--YQQPGYGQSDPNAGQ-------GYGQSYGQQPGYGQPPG 200
Query: 744 ASQSTAYGVAQGTAAAGYGKTVSPQ 768
+Q YG GT + G+ T +P+
Sbjct: 201 YAQQPGYGGYTGTPSGGFPATEAPK 225
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.306 0.127 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,011,748,225
Number of Sequences: 23463169
Number of extensions: 794099431
Number of successful extensions: 3425305
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3110
Number of HSP's successfully gapped in prelim test: 71173
Number of HSP's that attempted gapping in prelim test: 2657954
Number of HSP's gapped (non-prelim): 425280
length of query: 784
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 633
effective length of database: 8,816,256,848
effective search space: 5580690584784
effective search space used: 5580690584784
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 81 (35.8 bits)